         gnD NONE
        recF NONE
NtRootA1_00050    5989 ..    6023 + -17.3  -3.14051   GGTGAAACGTCGTCG     GGGTCCTGGAAGC ACTTTCATG GCTTCCAGGACCC     TCTTCGTCGGAGTAA  91 218
        gyrB    8209 ..    8232 +    -6  -3.02511   TCAGGTTCCTGGATA          TCTAGTGCCT TACA AGGCGATAGA           TATTCCAGAGCTGAC  52 21
        gyrA NONE
NtRootA1_00080   11239 ..   11255 +  -3.5  -2.57132   CCGGTCAACGCCCCA              CCCAGGG AAG CCCGGGA              CTTGTAAAGCCGGCC  40 2
NtRootA1_00090 NONE
NtRootA1_t00010   11911 ..   11924 +  -3.7  -2.69151   AGTAGTCGCAGCGGC               GGTCG CAGG CGTCC                TGGTCTATAAAAAGA  42 103
NtRootA1_t00020   12153 ..   12176 + -16.8  -4.68645   TCCACCATAAGAAAA          GTCCCGGTCA GAAA TGACCGGGAC           TTTTGCTTTTAACTC 100 34
NtRootA1_00110   15457 ..   15484 +  -3.2  -3.53811   CGCGGAGAGTCCTCA        AGGCGTCGGGCG GACA TGCCGGACACCA         TTTGCGGGCAATACC  51 248
NtRootA1_00140   18131 ..   18183 +  -3.2  -2.97439   GTCAACGAACAAAAA CGTAC-GACGCCGAGCTACCGCTCT CCCT ATGGCGGTGCCTTGGCGACCGGCCG TCCTTTGGTGACGTT  42 209
NtRootA1_00150   19301 ..   19318 +  -4.1  -3.40775   GGGTGGCCAGTGCGT             CCTTGTA CTCC TGCGAGG              TATTTGGATCGCCAT  51 515
NtRootA1_00240   24681 ..   24707 +  -5.9  -3.31144   TGCCCGGCCCCTTGT        G-GCTGCGGATA CTCA TATCCGTGGCGC         TTGTGGCCGTAGCCC  51 69
NtRootA1_00250   25629 ..   25649 +  -3.2  -4.30576   CTTTGCGCCGTGACC            TTGCCGGG CGTGA CCTGGGAA            TTTTCCTGCTCAACC  64 205
NtRootA1_t00030   35529 ..   35554 + -16.9  -5.00196   GCGCACGCATAGAAA         GAGCCCCGGTC TTAG GATCGGGGCTC          TTTTGTTGTTTCCCC 100 35
NtRootA1_00360   40028 ..   40042 +    -7  -3.47573   TGGCGCGGGCAAGTG               CAGCCG TCT CGGCCG               TTCTGATGTCCGTCA  57 243
NtRootA1_00380   41003 ..   41014 +  -3.6  -3.66803   GCCCGTTCAAACTAT                GCGT GATC GCGC                 TTTGACGTCTTCGGG  54 80
NtRootA1_00400   42409 ..   42424 +    -9   -4.4078   GCCGGATTCGAGTGC              CGAGCA AATC TGCTCG               TTTTCCTTCAGCCAG  91 227
NtRootA1_00420 NONE
NtRootA1_00430 NONE
NtRootA1_00440 NONE
NtRootA1_00450   49096 ..   49114 +  -3.8  -3.55444   CTGAGCCAGAACTCG             TCCGCG GCTACTG TGCGGA             TTTCGGAGATGAACA  53 385
NtRootA1_00500 NONE
NtRootA1_00510   55797 ..   55810 +  -2.3  -2.71712   ACTGTTGCCAGCCAG               AACCG TTGC CGGTG                ATTTCCGGCCAAGAG  39 42
NtRootA1_00520 NONE
NtRootA1_00530   57336 ..   57384 + -10.2  -3.84451   TTGGAGCAGCGTTTG TCTCCGGGGCCAGCGTGGGCGTC TTCC GACGCCGTCGGTGG-TTCGGGGA TTTCCATTTCCAAAG  76 148
NtRootA1_00550 NONE
       glpQ2   59711 ..   59727 +  -5.8  -3.44051   GACCCTGCTGCTCGA              TCCGGA ACTGC TCCGGG              TTCTGCTCGTAGGAA  55 438
        serA NONE
        glxK   63416 ..   63428 +  -3.3  -3.18264   AGTCAGGTACTTGAG                GGGGC ATA GCTTC                TTCGTCGCTGGGCGA  45 17
NtRootA1_00610   64253 ..   64283 +  -3.2  -2.90194   GTGAAATCAGCTTTG      CGGTCCGCGGGATG AAGAG CG-CCGGCGG-CCG      TCTCCTTGCCGGGCT  42 37
NtRootA1_00620 NONE
NtRootA1_00630 NONE
NtRootA1_00640   68275 ..   68309 + -27.3  -2.70932   CCTAAACGCACACGA     CGACGGAACCCCCGC CTACC GCGGGGGTTCCGTCG     TCGTTACGGCAGCAG 100 48
NtRootA1_00670 NONE
NtRootA1_00680   70511 ..   70531 +  -5.3   -3.7108   TCATCGCGGACTTCA            CGGCAGG AGGCAAC CCAGCCG            TTTCCGTCTCGGGCT  58 80
NtRootA1_00700   72733 ..   72788 + -10.4  -3.36694   AGCATCGGCGCTTAA GGGTCAGGATGTGAGCGAGGATCCGG GGGT TTGGATGCTCTCTCACATCCTGCGGC TATTTCGGCATCCCT  69 85
NtRootA1_00710   73637 ..   73650 +  -2.3   -3.4072   CCGCCGCGGAGAGCT               TGCCA AGCT TGGCC                TTCTGCTCACGGGTG  47 293
NtRootA1_00730   75987 ..   76041 + -35.2  -3.61398   GTGCATAAACGCGTA CGACGGCGACCCTTACGTCGGGTGGG AAT CCCACCGAGCGTAAGGGTCGCCGTCG TTGTTAAGCGCAAAC 100 70
NtRootA1_00770 NONE
NtRootA1_00780   81337 ..   81348 +  -2.2  -2.92668   CCCCTTTCGCGTTGC                TGCA AGTG TGCG                 TATGCTTGCCTGATC  40 79
NtRootA1_00790   81681 ..   81725 + -10.7  -3.06183   TGAACCCGGCTGGAC CTGAACGGTGACCTCCGTGG CCTCGC CCGCGG-GGTCGCCGTCGAG TTGCGTCGCCATGGG  66 73
        serS   84098 ..   84156 + -26.8  -4.73388   AGTTCTCTCCGCGGA TCCCGCCCTTGTTCGTTTCACCCGCCCT TGT AGGTCGGGAGCAGCGAACAAGAGCGGGA TTTTTGCTGCCACTT 100 39
NtRootA1_00820   85380 ..   85402 + -11.2  -2.50113   GATCTGGCAGCGGGG           GCCGCGCGGA GTG TTCACGCGGC           GTTAATCCGGTGCTG  65 98
NtRootA1_00830   86476 ..   86528 +  -5.6  -3.28791   CCTTCTCCACGAATC CTTCGGGCTCC--CATTCCAGTGTCA CGT TGACGCCGCAGTGCTGGGGTCCGAGG TTGTCGAAGCGGACT  52 190
        sigB   88650 ..   88672 +  -4.8  -3.61398   GCGGTAAGCACCACA           TGCGGTCC AGGCGGC GGACCCCA           TTCTTCAGCAGGAGC  55 182
NtRootA1_00880 NONE
NtRootA1_00890 NONE
NtRootA1_00900   92379 ..   92396 +  -4.1  -3.53012   ACAGAGAGGACGCAC             CCATGAA AATC TCCATGG              TTTCCGAACACGCCA  51 20
NtRootA1_00910 NONE
      gmhA_1 NONE
NtRootA1_00930 NONE
NtRootA1_00940   96552 ..   96597 + -17.7  -2.66316   CACGTCCTGAACAAC CT-CGGCCACGGCGATGCCC CTGATCA GGGTGTCGTCGTGGCCGCAG TGCTGTGCTGACCAG  86 48
        hldE NONE
NtRootA1_00970  100416 ..  100429 +  -4.5  -3.17212   CCGCCGTTGACGCCA               CGCTA ATTT TGGCG                TTGATGGCCTAATCC  47 20
NtRootA1_00990 NONE
NtRootA1_01000 NONE
NtRootA1_01010  103732 ..  103787 + -25.8  -3.17075   GCGTTACCCGCCCAA CTGAGTCGCAGTTAAGCCCGTTTTGA GATC TCAGAACGGCATTAACTGCGACTCAG TTGGGTTCGCGGGGC 100 43
NtRootA1_01080 NONE
NtRootA1_01090  111185 ..  111195 +  -8.2   -3.5393   GGCAAGGGCCGACGC                 CGGC CCG GCCG                 TTTGGCGCCAGTCGT  65 118
        tilS NONE
NtRootA1_01120  112860 ..  112872 +  -3.3  -3.57144   GACTTCGTGGGCACG                CTTGC CCC GCACG                TTTACGAGTAACCAC  49 2
NtRootA1_01130 NONE
        ftsH NONE
        folE NONE
        folP  117775 ..  117785 +  -2.4  -2.57344   CTCGAATCGCCCGCT                 GACC GGA GGAC                 CTTGTGGACAGGATC  38 24
NtRootA1_01170 NONE
NtRootA1_01180 NONE
NtRootA1_01190 NONE
NtRootA1_01200 NONE
NtRootA1_01210 NONE
NtRootA1_01220 NONE
        panC  123183 ..  123195 +  -7.7  -2.87564   ATCCAAACCCAAACC                TGAGG AAT CCTCA                TGTCTACCGACGTCA  56 130
NtRootA1_01250  124686 ..  124720 + -15.7  -3.09492   GGTCACTGAGTCTTT    GCTGGGCCCGGCCGGG CCGT TCCG-CTGGGCCCGGC     TGTTGCCCTTCCCAA  88 32
NtRootA1_r00010  127207 ..  127226 +  -9.3  -4.57569   TTTGGCGCACTGTTG            GGTCCTG AGGCAA CAGGACC             TTTTTGCAGCAATGC  87 279
NtRootA1_r00020 NONE
NtRootA1_r00030  131058 ..  131089 +  -2.9  -5.09225   ACTCCTTAGCCCGAG      ACAAAGGCCTCCA CCACCA TGGAGGCCTTCAC       TTTTTTAACTGACGT  78 150
NtRootA1_r00040  134277 ..  134296 +  -9.3  -4.57569   TTTGGCGCACTGTTG            GGTCCTG AGGCAA CAGGACC             TTTTTGCAGCAATGC  87 279
NtRootA1_r00050 NONE
NtRootA1_r00060  138272 ..  138289 +  -2.6  -3.53091   ATGCGGGGCTTTTCT             CGCCGA CCACGA TCAGCG              TTTCAAGGGGCAGCT  47 295
        lysS NONE
NtRootA1_01320  142534 ..  142570 +    -3  -2.78934   GCAGCTAAATAGCCT   GCA-AATTGGGTGGCCT TAGC AGGAAACCCAAATGTGC    CTTTGACGTGTGTGC  41 29
NtRootA1_01330  142996 ..  143031 + -19.2  -4.57569   TCCTGATTCACCCGC    CTTCAATGCCCCGGCAG CTT CTGCCGGGGCATT-AGG    TTTTTAAGCCCATGG 100 35
NtRootA1_01340  145918 ..  145959 + -21.7  -3.13403   GTGCGCAACGTAAGC CAACTGCCCCGTCCATTCC GCAA GGAGTGGGCGGGGCATTTG  TGTTGGTCCCCCCGA 100 44
NtRootA1_01350  147359 ..  147381 +  -9.2  -2.94099   GAATATCTGAAAGTA           GTGTTTCACT GTG AGTGAACCAC           TCTGTGATCGGGGAC  62 86
NtRootA1_01360  149540 ..  149569 + -14.4  -2.73441   TAGGTTCCGACGCTG       GTCCCGGTCGGTC CGGCC GAC-GACCGGGAC       ATTTACCGCGTGCTC  80 38
NtRootA1_01370  150283 ..  150308 +  -8.9   -2.6415   ACAACAAGAGCTAAA         TGGTGCGGGGT TTCA ACCCTGCCCCG          ATTATGCGTGATTTA  57 47
NtRootA1_01380  151864 ..  151921 +  -2.8  -3.57263   CGGCGGCGACGCCGT GCTGAACAGTTAGGGGGCG-GAC-CG TGCAAAAT CGTGTCACGTTTCCGGACTTTTCAGC TTTCCAGATAGACAT  49 13
NtRootA1_01390  152114 ..  152152 + -20.2  -3.72576   AGATTAACTGTGTCA   TTCCGGCAGGGACGGGCC TTT GGGCCGTCCCTGCCGGCC   TTTAATGGCCGCGAC 100 34
        dhaK NONE
NtRootA1_01410 NONE
        dhaM NONE
NtRootA1_01430  154911 ..  154950 + -15.6  -4.36903   AAGAACGACTAGGAA  TTCAGGCGGGGCCGTTGC GGTT GCAGCGGCCCCGCCTTCC   TTTGTGTTTGATAGG 100 29
NtRootA1_01440  155403 ..  155413 +    -4  -2.72144   TCCCAGCGATGGGAA                 CAAT TGC ATTG                 CTTTCCAACAGGTCG  43 168
NtRootA1_01450  155696 ..  155706 +  -3.2  -3.92324   CGCCCACTCCTCGAC                 GCGA CGG TTGC                 TTTCCTCTTCGGAGA  56 96
NtRootA1_01470  157123 ..  157140 +  -9.1  -3.29144   TCCGCGAGCACCTCC             GCCGGCT TTGG AGTCGGC              TTGTGGAGCGCATCA  63 111
NtRootA1_01510  160243 ..  160254 +  -5.8  -3.14931   CAAACCTTCACGGAC                CGTG CGTG CACG                 TTGATCGCCGATGCC  51 79
NtRootA1_01560  166350 ..  166361 +  -5.8  -2.52464   CATTGAAGTTCCCTG                CTCC GCGC GGAG                 TGGCTTGAGCCGCCC  45 76
        pstC NONE
NtRootA1_01580  168474 ..  168488 +  -2.7  -4.12188   AGACGGGCCGCTAGC               CGGGC CGATC GCCAG               TTTTCGAGCTGCTCC  59 27
        pstB  169376 ..  169415 + -14.2  -5.00616   GAGAGCTGGCAATGA  ACGACGGCGGCCGT-CGCC TTG GGGGTACGGCCGCCGTCAC  TTTTTTGCACCCAAC 100 68
NtRootA1_t00040  172443 ..  172471 + -20.4  -5.27335   GGCCCACCCTTTCTG        CAGGCCGGAGAC GTTGA GTCTCCGGCCTG        TTTTTATTTCCGCCG 100 33
NtRootA1_01630  174244 ..  174274 + -18.3  -2.70932   GAGCGTCCTGGAAGG       GCTCCGGCGCCTG AGTTG CGGGCGTCGGAGC       TGGTTGCCCGGCCGC  86 108
NtRootA1_01690 NONE
NtRootA1_01700  178661 ..  178672 +  -2.2  -3.41745   GCGTCAGGCAGTCCG                CG-CC GTA GGACG                TTACTGTTCTAAGAA  46 18
NtRootA1_01710  179968 ..  179978 +  -2.4  -4.11216   AGCCGAGGTGAGGTA                 CGAG CGT CACG                 TTTTCCAACTCCAGC  59 203
NtRootA1_01740 NONE
        ureA NONE
        ureB NONE
        ureC NONE
        ureE NONE
        ureF NONE
        ureG  187329 ..  187359 +  -2.6  -3.67792   CCTTCATCCGCGTCC      GCT-GA-TCGCCCC GTGCG GGGGCGGCTTGAGC      TTTGCGTCAGTGTGC  51 115
       ureD1 NONE
        nicT  189241 ..  189267 +  -5.1  -3.53091   CGGCCGGAAACTAAA         GAAGTATCCTG CAGTT CAGGACACTAC         TTTCAGGGGGAAAAT  53 52
NtRootA1_01830 NONE
NtRootA1_01840  190833 ..  190882 + -29.7  -2.73364   TAGGAACCCCATCTG AGTAGCAGCTGATGCCCTTTTGA GCGT TCAAAAGGGCATCAGCTGCTACG TAGTTGGGCTAGCGG 100 38
NtRootA1_01860 NONE
NtRootA1_01870  194685 ..  194716 +    -5  -4.16842   CCGTCAGTGGACATT      GCAATCT-CGGCGGC GGA GTCGCCGTGGAACGC      TTTGTTGACGCTGGC  65 308
NtRootA1_01930  200389 ..  200429 + -21.5  -2.62983   AGCTCGCCGAGACGA  CAGTTAATGCCAATGTTCC TCT GAAACATTGGCATTAACTG  TCATCTCGCGATGGG 100 19
NtRootA1_01960  202192 ..  202237 + -11.3  -2.67513   AGCCCTTACCAAGTA GGACAGCACTTGTCGCT CTGAGCATGTGC TGTGACAAGTGCTGTCC CTTGGTTATGGGTCT  66 39
NtRootA1_01990 NONE
NtRootA1_02000  206482 ..  206498 + -10.9  -3.85698   CGTCGCCACCTCCCG              CCAGTCT TTT AGACTGG              TTTGTCAAAGGAGAC  81 86
NtRootA1_02010 NONE
NtRootA1_02020  208897 ..  208937 + -18.4  -4.77896   CACAGGCTTCGTAAC  ACGGGGAGGCTAGGATCA GACCA TGATCCTGGCCTCCCTGA  TTTTTGCCTTGCTTG 100 55
NtRootA1_02030  209319 ..  209332 +  -9.5  -3.21099   TGGGCTAGGGCCAGC               GGCGC CGAC GCGCC                TTAGTGCTCCGGCGG  66 33
NtRootA1_02050 NONE
       amiB1  213345 ..  213357 +  -4.7  -3.21099   GGGAGTGCCATGCAG                CGGGC AAA GCCGG                TTCATCCTCCCGCCA  49 122
NtRootA1_02080 NONE
NtRootA1_02090  215148 ..  215167 +  -2.8  -3.49938   ATCTCAGCGTCCTTA            GTGCG-AGC AAG GCTTCCCAC            TTGTCCATTATTTGG  49 66
NtRootA1_02100  216039 ..  216089 +  -9.4  -4.66833   ATCAGGCAGCCAGTC ACGAGGGGGCGCCACCGGATGAAG TAA CTTTTCCCGGCGGCGCCTCCGCCA TTTTTCCGCTTAAGC  87 85
NtRootA1_02150  222500 ..  222519 +    -7  -3.59247   CGGGATCCTCAATGG            CGACGTCC TTGA GGGCGGCG             TTTCCGGCGTTCTTC  59 510
NtRootA1_02180 NONE
NtRootA1_02190  231196 ..  231230 + -15.8   -3.1996   CCGCAGCAACCCCAA     GTGGGGAAGAACGC CAACCAC GCGCTCTTCCCCAC     TTGCATTCCCCTTTG  89 120
NtRootA1_02200 NONE
NtRootA1_02210 NONE
NtRootA1_02230 NONE
NtRootA1_02240  235314 ..  235325 +  -7.2  -2.73364   TAGTGATCCGGACCG                CCCG CGTG CGGG                 TACTTCGACTCGAAC  52 99
NtRootA1_02270  238230 ..  238259 +  -8.6  -3.28712   GCGCAGAAGTTGCAG       GCACCTGATTCC TAGGCC GGAGTCAGGTCC        TTGTCACGCCGGCCG  63 224
NtRootA1_02300 NONE
NtRootA1_02310  243227 ..  243238 +  -3.6  -4.16842   CCGGCCGATCACGTA                GCGG CTAT CTGC                 TTTCTTCGCCATCAC  61 516
          ku  246293 ..  246348 +   -38  -3.51924   GCGTCGGGCTCCCAA CTGGGTCGCATTTGTGCGCGTTCAGG GCGC CCTAAACGCGCACAAATGCGACCCAG TTGTGTGCGTGAGCC 100 45
      pdhR_1  251721 ..  251755 + -14.2   -5.0065   GGCTAATTAGCGAAG     CGGCGTCGGCCGGTGA TGA TGAACGGCCGACGCGG     TTTTCTTTATGAATA 100 52
NtRootA1_02410  253403 ..  253436 +   -11  -4.42386   CTATTTACTTCTACG     GGTACTTGGGAGCG TTCCAC CGCCTCCGAGTACC      TTTTATCGCTACCAC  93 454
NtRootA1_02430 NONE
      topA_1  255197 ..  255223 + -15.2  -4.67353   GGAAGCCGGGGTCGG         CCACTGAAGGCG GCC CGCCTTGAGTGG         TTTTTGCCTCCCTGG 100 137
NtRootA1_02520  263363 ..  263383 +  -2.4  -3.64915   ATCGGAAGATTGTCT            GGGTCCGG CGGAT CCGGAAGC            TTGTGCTTTCTAACC  49 120
NtRootA1_02550 NONE
NtRootA1_02560  265635 ..  265656 +  -2.2    -3.068   AGATGGAGGTTCCGC           GCCACGTGG GGTAA CCACG-GCC           TCTAATTTCATTACT  41 12
NtRootA1_02570  267027 ..  267044 +  -3.3  -4.09685   TCCTGGAGCACTTCG             GC-GCCCG ACG CGCGCAGC             TTTTCAAACGTGGCG  58 219
NtRootA1_02600  268440 ..  268458 +  -6.6  -2.52543   GCTAAGCGGGCCGTA             GGGCCCTG AAG CAGGCCTC             TGGATTAGACGGCAT  48 25
NtRootA1_02610 NONE
NtRootA1_02620 NONE
NtRootA1_02630  272842 ..  272889 + -21.5  -2.52464   CTCTTTGGGCTGGTC GCAGCATTAGCGGTTGTTCCC CGCCGT GGGAACAACCGCTAATGCGCC TCAGTTGGGGGAGGA 100 51
NtRootA1_02650  273634 ..  273679 +  -6.9  -4.18506   TTGGACTGGTATTTG TGTCCGGTGGG-GGTGTTGATT TCC AGTTGATGCCGCCCACCGGGGA TTGTTTTGGCGGTCC  69 195
NtRootA1_02670  275890 ..  275908 +  -2.4  -3.65351   CCGGGCACCGAAGAC             TGTCGC TATGGAC GCGATA             TTTGCCTGCCGGTCC  49 284
NtRootA1_02740  282554 ..  282586 +  -6.2  -2.66912   CGATAGCCGGACCAA     GTGCCGACGT-CACG GCCG CGTGGGCGCCGGCAA      TCGTATCCGTTCCCT  46 437
NtRootA1_02770  285822 ..  285839 +  -4.7  -3.19192   ACTGCACCGGAGTTC             CGTGGCG ATAG CGCTCCG              TTCAGTTCGCTCCGC  49 147
NtRootA1_02790  288359 ..  288392 +  -4.5  -4.41494   CCAGAGGTCGGCGAT     CACG-GCGTCGTGGCG GGC CGCGATGATGCGCATG     TTTTCGTTGAAGATG  69 406
NtRootA1_02810  289811 ..  289847 + -28.1  -3.90744   CGGGGTGCAGAAGAA    CGACGGCGGTACGCACC TAT GGCGCGTACCGCCGTCG    TTGTTTCAAAAGCGG 100 80
NtRootA1_02840  292271 ..  292281 +  -8.2  -2.87211   TCGGCTGCGTCGCTC                 CCGG GCG CCGG                 TGTGTAGACCACAAT  55 68
      ilvD_1  295328 ..  295342 +  -3.4  -4.12188   TGGCTGGCATTGAAC               CGCGGT TCG GCCTCG               TTTTCGCGCTGCTCC  61 349
NtRootA1_02880  297240 ..  297251 +  -3.6  -3.85817   AAGTTCGGTCAACCA                GGGC CGGT GTCC                 TTTATGGAAGACCAT  56 77
NtRootA1_02910  300346 ..  300400 + -18.7  -3.73224   TAGCTGCACAGGCAA G-CTAACTGCAGGAAGGGCCCGGTTC AATT GAACCGGGCCCTTCCTGTATGGAGAC TTTCCTAAGCAGTAA 100 55
NtRootA1_02990 NONE
        ordL NONE
NtRootA1_03010 NONE
NtRootA1_03020 NONE
NtRootA1_03030  313723 ..  313736 +  -2.3  -3.46106   ACCTTGGGTTCGTCC               CGGTC TCCT GACCC                TGTTTCGCGTTTTCC  46 15
      mmsA_1 NONE
        adhC NONE
NtRootA1_03060 NONE
NtRootA1_03070 NONE
NtRootA1_03080 NONE
NtRootA1_03090  321546 ..  321574 +  -7.4  -3.14132   CGATCAGTAACTCCA       CGATCCGGCCGCG CTCC TGCGG-CGGATCC        TTCGTGGACCACGCG  56 85
NtRootA1_03110  323324 ..  323371 + -22.2  -2.52464   GCACAACCCAACTGA GTCGCATTAGAGCGCGTTTAGA GCCC TCTAAACGCGCTCAGCTGCGAC TCAGTTGGGAGAGAA 100 16
NtRootA1_03150  327010 ..  327053 +  -6.4  -2.51738   TGGTCATCCGCAACA CCACAGGGCCTGCCCCGAAG TGAG CAACGCGGTTGGCTCGGTGG CTTCCTGACCTTGTT  48 3
NtRootA1_03170 NONE
NtRootA1_03180 NONE
NtRootA1_03190  329969 ..  329979 +  -4.6  -3.72576   TGGTTCATTTGCTGG                 GGTG AGC CGCC                 TTTCCTAGCCAAACA  56 21
NtRootA1_03210  332312 ..  332323 +  -4.4  -2.91452   CACCGCGCTTGTGAT                TGAG TGGT CTCA                 TGTCATTCCGCTGGT  46 58
NtRootA1_03220 NONE
NtRootA1_03230 NONE
NtRootA1_03240  334137 ..  334191 + -12.1  -2.77523   AGTCCGCGTCGGCCT GCGACGGCGTCAAGCAGGTTGGCG TCTTCGCT CGCCACCC-GCATGACGGCGTCGA TGATATTGATGAGAC  66 318
NtRootA1_03260 NONE
NtRootA1_03270  335607 ..  335617 +  -2.4  -2.64803   CGCTATAGCCAGGGT                 GCGG TAG CCGA                 TGGATTTCACGCTGC  38 19
NtRootA1_03280  336102 ..  336115 +  -9.5  -4.18042   ACACCGGATGGTGCG               GCCCG GCGT CGGGC                TTTAATTTCTCTGAA  80 7
NtRootA1_03290  337777 ..  337787 +  -8.2  -3.29144   GTTCCTCGATGCTGC                 CGGG TGT CCCG                 TTGTCCGCGAGGTAC  60 370
NtRootA1_03310 NONE
NtRootA1_03320  340629 ..  340669 + -17.2  -2.52464   TGGTCCGCGAGGTGA  CAATTAATGCCAATGTTC TGCGC GAACATTGGCATTAACTG  TCACTTGGACGGCGG  85 42
NtRootA1_03340  343313 ..  343329 +  -2.1  -2.81195   CCGCCCGCGGGGACG              GGCGCTT GAG ATGAGCC              GCTTTTTTGACTTGT  39 17
NtRootA1_03350 NONE
NtRootA1_03360  346026 ..  346039 +  -5.2  -4.24342   CTGGTTGGTCTTGGC               GCGG CCAACT CCGC                TTTCTTCATGGGCGC  65 182
NtRootA1_03380 NONE
NtRootA1_03390  348156 ..  348168 +  -6.9  -3.17075   AGTCATCTCGCCCTA                GTCGC CAC GCGGC                TTGGGTTCGCCGGGC  54 52
      hutU_1 NONE
      hutH_1  352196 ..  352246 + -16.2   -2.8001   CATTTGATGGGCATA TTTGTCACGCCCCGGTCTTTGT TCGCAAC GCAGGGGCCGGGGCGCGGCAAA TGTAGTAGAACTTAT  86 57
NtRootA1_03430  352718 ..  352772 + -23.7  -5.26316   GCAGCTTAAACAGAA CCGGGGCTCGTTCCCTTTCCGCG GGTAGTAGA TGCGGAAGAGGAACGGGCCCCGG TTTTTTGTGCGCTGG 100 133
NtRootA1_03490  361962 ..  361976 +  -2.7  -4.44915   GGATGGCGAAAATTC               CCCGG AATAG CAGGG               TTTTCTACATACTTG  64 16
NtRootA1_03510  363100 ..  363154 + -29.7  -3.94974   AGCTTCACGCTCCAA CTCA-AAGGCCGGTGCCTTCGAGGAC TCAC GTCTTCGAAGGTACCGGCCTTCTGAG TTAATTTTTGTTCGT 100 40
NtRootA1_t00050  363538 ..  363557 +  -3.4  -2.87132   ACCACGATGTGGTCG            GCCAGGAG AACT CCGCTGGC             TGTATGCACGGCCCA  42 264
NtRootA1_03530 NONE
NtRootA1_03540  368706 ..  368736 +  -2.4  -4.85782   AGAAGATCGCCAAGC       ACCTCAAGGTAGGC CCC GCGGACGTTGAGGC       TTTCTTTTTGGGCCC  74 467
NtRootA1_03570  370916 ..  370934 +  -4.5  -3.14132   CCACGCCGCCGATCA             GTCCCCA GATCG TTGGGAC             TTCCTGAAGCACAGC  47 152
NtRootA1_03590 NONE
NtRootA1_03600 NONE
NtRootA1_t00060 NONE
NtRootA1_t00070  373177 ..  373218 +  -8.7  -3.33162   TCAAGTCCCGTCAGG GTCGCTCTGAGCGCCGGAA GTAA TTTCGGTTCTCAAGGTGAC  TTGTCACCTAGGCTC  64 21
NtRootA1_t00080  373312 ..  373348 +  -8.1  -5.30616   AGCCACCAGCGAAAA   CCCCGTC-TTTCCC AGCAATAAAA GGGAAAGGGCGGGG    TTTTTCTTTACGTCC  93 33
NtRootA1_03620  375738 ..  375756 +  -5.9  -3.16683   CATCACAGACATCGT             CAGTCCG GGTGA CGGTCTG             TTCATGCGGTGAGGT  49 14
NtRootA1_03680 NONE
        glpQ  383950 ..  383964 +  -7.1   -4.2558   TCGGCGTTGGGGCAG               CCCCA GGATG TGGGG               TTTTCCTGGCAGGTG  74 158
NtRootA1_03720 NONE
NtRootA1_03730 NONE
NtRootA1_03740  386996 ..  387007 +  -3.6  -3.21416   CCTGGACGCCATTAC                GGGC CGGC GCTC                 TTCGTCATGAGCGTG  47 4
NtRootA1_03750 NONE
NtRootA1_03760 NONE
NtRootA1_03770  388672 ..  388682 +  -3.2  -4.32201   TTTTGCCGAATATTT                 CACT CCG GGTG                 TTTTGCGTTGCTTAA  64 54
NtRootA1_03780 NONE
NtRootA1_03790  390146 ..  390164 +    -3  -2.99871   CGTGGCTCGCCGCTG             CTCCGCAT GTC GTCCGGGG             TGATTTGGTCTGGAG  43 158
NtRootA1_03810  392041 ..  392082 + -28.2  -4.57341   GGCTAACTCCGAAAG CGCTGCCTCCCCTGGCTGG TTTGC CCAGCC-GGGGAGGCAGCG TTTTTCCCGGAACTT 100 35
NtRootA1_03820 NONE
NtRootA1_03830 NONE
NtRootA1_03840  395682 ..  395706 +  -5.7  -2.57963   CGCTTGGCTTCTTCC          CCGGCATTGAT GCG ATCGATCCTGG          CTTGATGCTTGTCCC  46 475
NtRootA1_03900 NONE
NtRootA1_03910  401069 ..  401124 + -26.4  -3.09933   GAACCGCTAACCCAA CTGAGTCGCAGTTGTGCGCGTTTAGA CGCC TCAAAACGCGCACTGCTGCGACTTAG TTGGGTGGGTTAGAC 100 31
NtRootA1_03950  404800 ..  404855 + -22.2  -3.23274   TGCAAGGCTGACCAA GTAAGTAGCAGATGATGCCGTTTTGA GCGT TCTAAACGGCATCATCTGCTACTCAG TTGGGTTATCGCAGC 100 30
NtRootA1_04060  415605 ..  415622 +  -5.6  -3.53761   GAAGTAAGTAAGATT             GTGTTG GAATTA CAACAC              TTTGCGACACCCTTA  55 34
NtRootA1_04070  416500 ..  416520 +  -4.6  -4.56597   TGAGGCTCCTGATGC            GCCTTGGC CGCTC GCCGACGC            TTTTTCGCGAAACCC  72 72
NtRootA1_04080  418148 ..  418199 + -15.1  -3.14944   GTCAAGGGACGACCT GCGCAGCAGAACCGGGGCACCAGC AACAG GCTGGTGCCCCGGCTGT-CCGGGC TTGGCTCTCCTACTC  85 169
NtRootA1_04090 NONE
NtRootA1_04100  419531 ..  419545 +  -3.5  -3.14344   TGAATATAGGCCAAC               CCCTG CTTTA TAGGG               TTCCTCGCCCGCATA  44 437
       mpt83  421948 ..  421972 + -22.9  -5.45652   GTCCGCAAACAAAAA          GCAGGCGCCGG GAT CCGGCGCCTGC          TTTTTTGTTGGAAAT 100 65
NtRootA1_04260  439014 ..  439034 +  -8.3  -3.09933   CGTGCAGTTCCGGGC            GCTTGTGAT GAA ATCGCAGGC            TTCAGTCCCTTGGAG  57 150
      pdxS_1 NONE
NtRootA1_04280 NONE
NtRootA1_04290  441350 ..  441365 +  -2.4  -2.79183   TCCGTCGTGGAAATC              GAGCCG GCGG TGGCGC               TCTGATGGCCGTCAC  39 5
NtRootA1_04300  442364 ..  442374 +  -6.8  -3.14881   GCTCGCCCCTGCCGT                 CGTC ACG GACG                 TTGATGAGCAGGTTC  53 396
NtRootA1_04320 NONE
NtRootA1_04330  444746 ..  444794 + -20.4  -4.60041   TTCAGCCCAATAACG GTCGCCGCCCGGAAGA-TACCCC TCAA GGGGTACTTTTCCGGGCGGCTCC TTTTTGGGGCTCAGT 100 45
NtRootA1_04350  447619 ..  447655 + -21.8  -2.87931   CCGAGTTTGTTGTTA    GCTGATGCCCTTAGGA TGCCT TCCTAGGGGCATCAGC    TGTATAGAAACTCGA 100 53
NtRootA1_04360  449125 ..  449136 +  -2.2  -3.93583   GACCCTGGCGCGTCC                CGTT GTTG AGCG                 TTTGTGGCTCCGTTG  53 62
NtRootA1_04400  453782 ..  453804 +  -7.1  -2.63631   GACCGAAAGGGTTTG          GGTTATTCCG CGGC CGGAA-AACC           TCCTCTGGAAATTAG  50 53
NtRootA1_04410 NONE
NtRootA1_04420 NONE
NtRootA1_04430 NONE
NtRootA1_04440 NONE
NtRootA1_04450  458982 ..  458992 +  -6.8  -3.02511   TGCCACGGCGCCCGC                 CGGA CAG TCCG                 TCTTGAGGGAATGCG  54 293
NtRootA1_04460 NONE
NtRootA1_04470  460584 ..  460595 +  -2.2  -3.72576   GGACGGCTAGCTGTA                CTGT CCCC GCAG                 TTTGATGACACGGGG  51 42
NtRootA1_04480  461905 ..  461916 +  -2.2  -4.11216   CATGAGGGCATCGAA                GTCG CGGG TGAC                 TTTTCCCAGTGCGGG  59 415
      gcdH_1  467174 ..  467220 +   -34   -3.5627   CGTCTAAATCGACAA TGAGGGCATCTCTTCGCCCGCG GAA CGCCGGCGAAGAGATGCCCTCA TTTGGAAACTGCTAT 100 34
NtRootA1_04590  473909 ..  473932 +  -6.7  -2.75064   CTGCGATGACTCCTC          CCG-CGTCGT CATAC GCGACGACGG          TCGTTGAGTCGCCGA  49 517
      pdhR_2  483589 ..  483607 +  -5.2  -3.21416   GCGGGGCCGAATCAC             GGCGCAAT ATG GTTGAGCC             TTAGTCATGCGGCTG  51 175
        nadE NONE
NtRootA1_04720 NONE
NtRootA1_04730 NONE
NtRootA1_04740 NONE
NtRootA1_04750 NONE
NtRootA1_04760 NONE
NtRootA1_04770 NONE
NtRootA1_04780 NONE
      uxuB_1 NONE
NtRootA1_04800 NONE
NtRootA1_04810  497059 ..  497087 + -19.6  -4.04174   TCGATGCACCAGAAG        CCCGGCACTGCC CATAA GGCGGTGCCGGG        TTTGCTTGTGTGCGA 100 42
        xylF NONE
        xylG NONE
NtRootA1_04840  501462 ..  501475 +  -3.8  -2.82516   ATTGGCCTGCATCCC               GCTC CGAACT GAGC                TGTCCTGCTCAGAGC  43 56
NtRootA1_04850 NONE
        pyrE NONE
NtRootA1_04870  504754 ..  504768 +  -7.1  -3.55563   CGGGCGTGGAGGGGA               CGTGG AGCCG CCACG               TTTCGGCCATGACCT  59 330
NtRootA1_04900 NONE
NtRootA1_04910  508515 ..  508542 + -11.4  -3.07443   CGAGATGGCACTTAA        TGACAATCCAAG CGCG CTCGGATTGTCA         TTAAGTGCCATCTCG  69 48
NtRootA1_04920 NONE
         fba NONE
NtRootA1_04940  511119 ..  511162 + -32.6  -3.14344   CGCTGCTTAAGCAAA CGACGACGGCGGCCCTCACC AAAA GGTGGGGGCCGCCGTCGTTG TTAATCACCCAACTG 100 47
NtRootA1_04960 NONE
NtRootA1_04970 NONE
NtRootA1_04980 NONE
NtRootA1_04990 NONE
NtRootA1_05000  515377 ..  515396 +  -5.6  -3.46602   TGCCATGCGGCAGGC            TGCACCGG TAAG TCGGGGCA             TTCTCATGTACGGCG  53 160
        purA  516894 ..  516904 +  -3.2  -3.34398   GCTCAGAAGTTGCGC                 GTTC CCG GGAC                 TATTTCGGCGACGCG  47 165
NtRootA1_05020  518483 ..  518495 +  -5.5  -3.13867   ATCGTGTCTTCCGGG                CTGAC GAA GTCGG                TGTGTTCGTGGATGA  51 56
NtRootA1_05050  521009 ..  521022 +  -3.8  -3.06915   CGCTGGGGTTGACGC               TCGC ATGAAG GCGA                TTACCTACAGTGAAT  45 72
NtRootA1_05060  521923 ..  521938 +  -6.1   -3.2115   GAAAGATCGTTGTTA              CCGTC CAGCAC GACGG               TTGATCACTGCTTTC  54 6
NtRootA1_05070  523976 ..  523990 +  -7.1  -3.06696   CAGGCCAATGGAACC               GCCCA GCTGG TGGGC               TGTGTTGACCAGGCC  51 174
NtRootA1_05090  525932 ..  525963 +  -6.6  -3.30124   GGGGGAGGAGCATAA      TAGTTAGCGTAGCT AATT AGCACTGCTAACTA       TTATGCGACCTCAGG  54 93
NtRootA1_05100 NONE
NtRootA1_05110  527801 ..  527829 +    -6  -3.21807   GGCTGCCATGCCTGA       GCGATGATGG-GCG TCC CGCTCCATCC-CGC       TATTACATTTGGTAG  54 58
NtRootA1_05130 NONE
      solA_1 NONE
NtRootA1_05150 NONE
NtRootA1_05160 NONE
NtRootA1_05170 NONE
NtRootA1_05180  534620 ..  534653 +  -2.5  -3.04902   ACAAAGGTTCAACAG     CTGATCGCGGTC TGAACATTGAT GACTGCG-TCAG     ATTTCTGTGGTCGAC  41 22
NtRootA1_05190 NONE
NtRootA1_05200  536485 ..  536495 +  -2.4  -2.56046   AGCCAGCAGCGGAAT                 CGGC GAA GCAG                 TAAATTCCCGTTTCC  38 150
      bacC_1  537149 ..  537163 +  -8.5  -3.28791   GTGCTCCCGGTCGAC               GGCGG CTACA CCGCC               TTCTAGCACGCCCCT  63 5
        gabD  539033 ..  539050 +  -6.3  -3.05384   GACGCAGACGAAGAT             CAGCGGCA GGC TGCC-CTG             TTCGATCGCCCACAG  51 388
NtRootA1_05290 NONE
NtRootA1_05300  545981 ..  546000 +    -5  -3.58343   AGGCGTACGCCCGGC            CATGCC AGACTGGA GGCATG             TTTCCCCGTCCTGAG  53 39
NtRootA1_05310  547228 ..  547238 +  -2.4  -3.13403   CAGGGCGGGCCGGGA                 CCCC GCA GGGC                 TGTTGGTGCAGCCAC  41 113
NtRootA1_05320  548939 ..  548953 +  -5.7  -3.57462   GGGCCCTTAAATAGG               GGATG CTCCC CATCC               TTTCCCGCTGCCGTC  55 40
NtRootA1_05330 NONE
NtRootA1_05340  549992 ..  550040 + -21.7  -3.53012   CAGTTAAACCAGGAA TCACGACGGCGGTGGCCAGCCCT GCG GGGGGTGGCTGCCGACGTCGTGG TTTCCGAAGGGAAAC 100 46
        socA NONE
NtRootA1_05390 NONE
NtRootA1_05400  554882 ..  554895 +  -6.7  -2.66316   CGAACGCCTGCAGCG               CTTCC TTTC GGAAG                TCCTGTGATGGGCGG  48 4
NtRootA1_05410 NONE
        socD  557176 ..  557226 + -16.9   -4.1552   AGCCGCCTTAACAAG GGCCAACGGCCCCGATACGC-CGT CTGC ATGAGCGTTTCGGGGCCGTTGGAG TTTGTTGGGGAAATA 100 76
NtRootA1_05440  558690 ..  558741 + -19.4  -3.14132   CTAGCGGAGCGGAAA CGGCGACGACGGCGACCTTCACCT TGGT AGGTGACGGCCGCCGTCGTACTCG TTAATCCAAAACCAG 100 37
NtRootA1_05500 NONE
NtRootA1_05510  567170 ..  567180 +  -5.4  -3.22774   TGAAAGGCGCGGGAC                 GCTA AGC TAGC                 TTCATGATGCATGTC  51 21
NtRootA1_05520  567606 ..  567625 +  -2.1  -3.81951   CTGGCATTACGGCCT            GTAATCG CCAAGT CGATTCC             TTTGCTAATCTGCAG  53 22
NtRootA1_05540 NONE
NtRootA1_05550  569046 ..  569068 +  -3.2  -2.57795   CAGCCCCGCACCCTC           TCCCCACGCC GCT GACATGGGGC           TACATTGATAGTGCA  40 65
NtRootA1_05560  569796 ..  569808 +  -2.7  -3.21925   ACTGGCAAGAAATAT                TGATT TTC GATCA                TTCGTGGTGAAGTAT  44 72
NtRootA1_05570 NONE
NtRootA1_05580 NONE
NtRootA1_05590  573679 ..  573699 +  -2.4  -4.18018   TCGAGTGTGAGAAGT            TCCCGACC ACCCC GGCAGGGA            TTTTCCCTGCCGCCA  59 454
NtRootA1_05630 NONE
NtRootA1_05640  577046 ..  577059 +  -3.7  -4.25074   ATGCGCTCACCCTGG               CCGGG CCTT CACGG                TTTTCGCGTTTCATG  62 155
NtRootA1_05720  584042 ..  584055 +  -3.7  -4.05714   TCAGCAATGAGGGGC               CGCAC GAGC GAGCG                TTTCTCCTTGAGGCT  61 262
NtRootA1_05740  584660 ..  584676 +  -6.5  -3.06261   GGAAAGGCTCCGCTT              TGACAGG AAC CCTGACA              TGTTAGAAATTGGCG  52 3
NtRootA1_05750 NONE
NtRootA1_05760 NONE
NtRootA1_05770  587918 ..  587963 + -11.1  -4.90869   GGCGTTAAGGGTTCG GTAGGTCCGTCGG-GCGAGATA GCG TTTCACGCACCGGCGGATCTCC TTTTTGGTTCGTCCT 100 97
NtRootA1_05820  593094 ..  593115 +  -5.9  -3.37612   GGCAAATAACGGCAT           TAGCGCA CGCACAAA TGCGCTA            TTCCTTCGGGTTAAA  53 32
NtRootA1_05830  593520 ..  593547 +   -17  -4.57341   TTATCTTTCACGAAA        GTGGGTCCGTCC TGGT GGGCGGGCCCAC         TTTTTCGCGCACGTT 100 44
NtRootA1_05850  597769 ..  597818 + -28.1  -2.62263   CTAGACGCAGCGCTT GGGCAAAACAGCGGACCGCAGAA ACTT TCCTGCGGTCCGCTGTTTTGCCG TCATGTGACGCGAAT 100 37
NtRootA1_05860  601570 ..  601582 +  -6.9  -2.88544   GAACTCAGTAGGCGC                GGCGC CAG GTGCC                TCTGTCAGCGTGACG  50 411
       map_1  604315 ..  604329 +  -5.6  -3.18274   GCGCTGAGCAGGGAC               CCGGGC GGC GCTTGG               TTGCCTTGCGGTGGG  51 34
NtRootA1_05930  605199 ..  605213 +  -3.4  -4.61199   GTACTGGTACGGCAT               GCGCCG TCC TGCCGC               TTTTCTCTCTCCCGT  69 97
NtRootA1_05940  605507 ..  605536 + -13.7  -2.68823   CGGCACCCAAATACC       GAAGGACCGGA CCGCGAAC TCCGGTCCTTC        CTTATGTAGGGCAGC  74 54
NtRootA1_05950 NONE
NtRootA1_05960  606197 ..  606236 +   -31  -3.14132   GCGACAAGTAGTTAA  TTGCGGAAGGACCGGAGC ACGT GCTCCGGTCCTTCCGCAA   TTAATCCCGACGGCG 100 30
NtRootA1_05990  610157 ..  610185 + -11.7  -3.64703   CCGGGGTGCGGTCTC        GGCTCCGTCCC CCACTTT GGGATGGGGCC        TTTCCGTGAAGAGCC  81 156
NtRootA1_06010 NONE
NtRootA1_06020 NONE
NtRootA1_06030 NONE
NtRootA1_06040  615363 ..  615389 + -19.5  -3.28712   CCGCCACGCGAAGAA         GGCTCCGTCCC AAGTG GGGACGGAGCC         TTCTCAGAAGAGCCG 100 135
NtRootA1_06060  618387 ..  618397 +  -4.6  -2.51464   TGCTCCGGGCCAATG                 CCCG CAA TGGG                 ATTGATGGCTCCTCC  43 235
NtRootA1_06110  623446 ..  623456 +  -3.2  -3.75153   AAATTCTCAGGTACA                 GTAG TAT CTGC                 TTTCGATTCGGAAGC  52 97
NtRootA1_t00090  623564 ..  623587 + -19.6   -4.3208   CCATTCTCCGCGTTT          GGCCCCGGTC CCTG GACCGGGGCC           TTTTGCGTTCTCGGA 100 30
NtRootA1_06130  628166 ..  628212 + -35.5  -3.53012   CGCCGGAATTGTAAA GACAGCCAGGCAGGACGTCGT CCATA ACGACGTCCTGCCTGGCTGTC TTTAAAAAGAGAAGC 100 54
NtRootA1_06160  631303 ..  631315 +  -3.3  -3.73775   ACAATGGTGCTTGCA                CGCCA GGC TGGGG                TTTGGTGCCGCTGGC  52 140
NtRootA1_06170  632953 ..  632968 +  -3.2    -3.794   CGTCATAAGCCGGCG              AGTAGG TACC CCTACG               TTTCATGGCTTGGGC  55 33
NtRootA1_06180  633502 ..  633517 +  -4.6  -3.41051   GCAGGAATTGGTTGA              CGCCGT TGAA AAGGCG               TTGTCATAAGAGTGG  51 1
        cpdA  635041 ..  635065 +    -7  -2.57211   CGAAGCGTTCCCACA          GCAGCTTGCG GTTAA CGCGGGCAGC          GTTCTCGAAGCCACT  48 446
NtRootA1_06220 NONE
NtRootA1_06230  638482 ..  638530 +    -8  -3.19668   GTTTGCGCCGTCTGG AGCTCGACGTCGGAGGCTGGGGC AGGC GCCGGAGTCT-CGCCGTCGGGCG TTCGATTGCGTCGTG  56 216
NtRootA1_06300  644974 ..  644986 +  -5.5   -4.1347   GCGCTAAACCAACTG                CCTAG CCA CTGGG                TTTCTGTACTTCAAA  66 280
NtRootA1_06320  646642 ..  646652 +  -8.2   -2.9348   TGAGCGGGACAGCAC                 CCGC TAA GCGG                 TCTCTGACATTTAAC  56 19
NtRootA1_06330 NONE
NtRootA1_06340 NONE
NtRootA1_06350  650034 ..  650053 +  -2.8  -2.77895   CTCGACGACGGGACT            C-GCCGG CACCTGA CCGGCCG            CTTCTTACGCATCAC  41 13
        abfA  651648 ..  651703 +   -22  -3.18274   TAGCGCCGCACCCAA CTGAGTCGCACTTGAGCGCGTTTTGA GCTC TCATAACGCGCACTACTGCGACTCAG TTGGGTTCGCGTACG 100 38
NtRootA1_06380 NONE
NtRootA1_06390  656085 ..  656103 + -10.2  -3.14211   CGCGCCCTTTTCCTC             AGCGTCCG CGA CGGACGCC             TTCATGAGGCGGGAT  64 200
NtRootA1_06450 NONE
NtRootA1_06460  662598 ..  662613 +  -4.6  -3.16881   GCAGTTGCGGCCCGC              CTGGCC GAAG GGCCAA               TTGATAAACTGGGTG  47 53
NtRootA1_06470  663515 ..  663528 +  -3.8   -3.7614   TCGTGGTGGTCAAAG               CTGG CGAAGA CCAG                TTCTTCCTCCTGCTT  56 444
NtRootA1_06600 NONE
NtRootA1_06610  677771 ..  677785 + -11.4   -2.6563   GCTGCTGGGCTGCCT               CCCCGA CCA TCGGGG               TCACTTGTTGCGAAG  66 189
NtRootA1_06640 NONE
NtRootA1_06650  684660 ..  684676 +  -6.5  -4.32034   CTACAGCCGCGGCGA              CGAGCCT TTC ATGCTCG              TTTTGATAATCATCC  73 509
NtRootA1_06670  686357 ..  686372 +    -6  -3.58522   CCAACCTTGGGACTG              CGCAGG ACTT CCAGCG               TTTCGCCGTCGTAGT  57 232
NtRootA1_06730  692963 ..  692975 +  -4.7  -2.70932   ACCACAGTGCTAATA                CAGCG GGG CGCCG                TGCTTCACGGGCGCC  44 217
NtRootA1_06740  693971 ..  693984 +  -3.7  -3.28712   AGTCATCCTGCAGCG               GTCCG AAAT CGGCC                TTATAGCGGGCACCG  48 266
NtRootA1_06800  699280 ..  699309 +  -9.9  -2.78384   TGTCCACAACCACGC       CCCGGATCGGGCC GTCG GGTGCGATCCGGA        TCTGCTCGGGGCGGA  60 267
NtRootA1_06850 NONE
      gcdH_2 NONE
NtRootA1_06880  708291 ..  708303 +  -4.8  -3.04864   AGCGGCGGGCGTGTC                CGTC ACAAC GACG                TCGTTTGATTCTGAG  47 253
NtRootA1_06890  708635 ..  708645 +  -8.2  -3.52102   CTTTGGCGACCGTTA                 CGCC GTC GGCG                 TTGTCTAGATCAAAT  62 7
NtRootA1_06910  711603 ..  711630 +  -6.2  -4.61199   CGGCCACTAACTCAG        AGGCGG-TGCCCT GAG AAGGCAGCCGCCC        TTTTATCTGTGCAAT  78 83
NtRootA1_06930 NONE
NtRootA1_06940 NONE
NtRootA1_06950 NONE
NtRootA1_06960 NONE
NtRootA1_06970 NONE
         ppc  719278 ..  719290 +  -4.1  -2.80522   CTTAAAGCACCTGCG                CCTGA GCG TTAGG                GTTGTTGGATGCCGT  43 122
NtRootA1_06990  719957 ..  719980 +  -5.2  -3.53012   GCCTGCCTTGGCGAT          GGCC-TCGTGG ATT CCACGGTGGAC          TTTCCGGCCCCACGC  53 378
NtRootA1_07010  720923 ..  720938 +  -6.1  -3.60296   CCGCGCCTTTATGGC              GCAGG AACCTG CCTGC               TTTGAAGTACCAGTA  57 111
NtRootA1_07040 NONE
NtRootA1_07050  724052 ..  724107 +   -33  -3.84451   GGGTTTCCCGCCCAA CTGACTGGCAGTAGTGGTTGTTCCCA GAGC TGGGAACAACCGCTACTGCCAGTCAC TTTGCGTTTACGGGG 100 41
NtRootA1_07070  725695 ..  725719 + -12.1  -3.61398   AACTGCTCAACAACC          GGACCGCCAAG ATC CATGGTGGTCC          TTGTTGCCACGAACC  75 443
NtRootA1_07090  727426 ..  727438 +  -4.8  -3.63782   CCGCCTGATGGTTGA                CCCT CCTGA AGGG                TTTCGAGTCCTATTG  56 33
NtRootA1_07130  733916 ..  733958 +  -9.1  -2.54574   GCCACGGCAAGGAAA GCGGATTGGCGTCCGGA TCGTGATAT TCCGGACGCCAACCACC GTGTTACTTGGCGTC  57 89
NtRootA1_07180  737948 ..  737961 +  -3.1  -4.04474   GAGAATTGATGGCAT               TTGCC CATC GGTAA                TTTCTCTGACCATGT  58 292
NtRootA1_07190  739017 ..  739053 + -10.8  -4.05714   CCGGGCAAAGCAAAA    GGCCCCGCCTCCCT CATAAACAA AGGGAAGCAGGGCC    TTTCTCATTGGCGGT  80 81
NtRootA1_07200 NONE
        ptpS  740682 ..  740694 +  -2.6  -3.07816   TGGGCAGGATATTCA                CTGG AGCTC CCGG                TTAAGTAAGTGCACA  41 5
NtRootA1_07220  741982 ..  741995 +  -4.5  -3.55889   CGCAGAAGTAGATCC               CG-CGG CCG CCGTCG               TTGTGATTGATCTGT  53 297
         upp NONE
NtRootA1_07260 NONE
NtRootA1_07270 NONE
NtRootA1_07280  746176 ..  746230 + -10.4  -4.25283   TTCCAGGTAAGCCAT CAGCCCGGCCAACTGCTCAGCGCTCC ACG GCAGTCCCGCGCTGATGGCCTGGCTG TTTTCCTGCCAGGCT  85 72
NtRootA1_07330  752015 ..  752041 + -11.5  -3.70902   TTGCTGCAGCCGAAA         GCGCCTGTCCT GTAAA GGGGCGGGCGC         TTTCGCTATCACGGG  78 44
        sixA  752732 ..  752743 +  -4.4  -3.99444   CGTCTCCGTCCGCAA                TTGC CCGG GCAA                 TTTCTACGTGTTGTT  61 145
NtRootA1_07360  754184 ..  754201 +  -3.5  -2.52464   ACTAGCTTGCTACTG             CAAAATG CCTT TATTTTG              TCCCTTGACCCGGAC  39 36
NtRootA1_07370 NONE
NtRootA1_07380 NONE
NtRootA1_07390 NONE
NtRootA1_07400  758473 ..  758524 + -16.1  -2.78712   CACCTAGCCCAACTG ACTGGCAATAGGGGTTGTTTCGA AGGGGC TCAAAACAACCCCTATTGCGAGC TACTTGGGTTCAGGG  86 96
NtRootA1_07420  760659 ..  760673 +  -6.4  -4.01071   AGGCGCGGCTGGACG               TGAGCT GGC AGCTCG               TTTAGTTGGTGTTGT  67 246
NtRootA1_07550  775648 ..  775698 + -33.6  -3.85698   GGCGTTCCCACTGGC GGCAAGGGCCGCCGTCGTACTTTT TCG GAAAGTACGACGGCGGCCCTTGCG TTTCTGCGCGCGGCC 100 40
        pckG  778049 ..  778102 + -32.7   -3.9978   ACGGCGTTCTTAAGT GAACGACGACGGCCCGTCACTTTTC GCTG GAAAAGTGACGGGCCGCCGTCGTGC TTGTTGCTTTTGTCC 100 55
NtRootA1_07610  784127 ..  784167 +  -3.1   -2.5294   GCTCGCCCTGGCTCA  GGCGGGTTAGCGCGCAG GCGGGTA CTGCGCTGAAAACCGTC  ATGTTGTGAACGCTC  39 16
NtRootA1_07620  785956 ..  785971 +  -4.6  -3.05384   ACTCGCTGCCAGCCA              AGCCGT TCGC ACGGCC               TTGCGTGCAGCGGGC  47 271
NtRootA1_07650  790347 ..  790376 +  -2.1  -4.34402   GCTTCGCTAGTGTGT       GAGCTGCATCAC CGGCAAA GTGGTGC-GCGC       TTTTGATCTGCGGCG  62 67
NtRootA1_07660  792156 ..  792175 +  -2.8  -3.55444   AGGTGCCCCCTGGGG            CAGCCT AAGGAAAG GGGCTG             TTTAGCCCCTCAGGC  49 82
NtRootA1_07690 NONE
NtRootA1_07700 NONE
NtRootA1_07710 NONE
NtRootA1_07720 NONE
NtRootA1_07730 NONE
NtRootA1_07740  803534 ..  803559 +  -8.9  -3.41366   AGATCCAATAAAGGG         GGCGTACGCAA CTAC TAGCGCACGCC          TATATTTTCAGATCG  64 30
NtRootA1_07750  804556 ..  804570 +  -5.6  -3.53012   ATGTCCTTTACTTGG               GGTGGG GCA CTCGCC               TTTAACGCCCGACAG  55 92
NtRootA1_07800  808493 ..  808549 + -14.4  -3.17075   CCACACCCACACAGG CCGCGAAGCGCCTGACTGCGCACTGTC CCAT GACAGTGCGCAGTGATG-GCCCCGGGG TTCAGTTGCGGACCA  83 304
NtRootA1_07830  810543 ..  810569 + -19.6  -3.48772   CAGAAAAACTGAGAA         CCCCTGGAAATC CTT GATTTCCAGGGG         TTCTCTACCGAGCTT 100 82
NtRootA1_07840  811631 ..  811680 +   -10  -2.52464   CACTGCAGTCCGTCC TGCGGCAGC-TTGCCGTCCACAA AGTAA TCGTCGACGGCGGTGCTGACGCA TGAGTTCGAGCGGCC  62 41
NtRootA1_07860  813302 ..  813312 +  -2.4   -3.7282   TGGTGGTGGTAATAC                 GGAC ACG GGCC                 TTGTTGATCGCGTCC  52 83
NtRootA1_07890 NONE
NtRootA1_07900 NONE
       gpm_1  818470 ..  818516 + -37.6  -2.57132   AGCTACGTAGTGTGT TAACGACGGCGGCCGGTCACCT CTC AGGTGACCGGCCGCCGTCGTTG GTTATGCGGGGACCC 100 108
NtRootA1_07940 NONE
NtRootA1_07950  821384 ..  821427 +   -27  -3.24032   CTTCAATCAGCACAA CGACGAAGGAAGGGTTCCGC CGCA GCGGAACCCTTCCTTTGTTG TCTTACTTGAAGCGT 100 43
NtRootA1_07970  822778 ..  822803 + -16.1  -4.85782   TCCTAAGAATTGATC         CCCGGTGGTGC GAAA GCGCCGCCGGG          TTTCTTTTTGCCACA 100 35
        ispD NONE
        ispF NONE
NtRootA1_08000  824539 ..  824552 +  -5.2  -2.62396   AAGTAGGCAAGTCAT               GCCG CGTCAT CGGC                TAATCTGGAGCGGTG  46 35
        cysS NONE
        yjfH  827256 ..  827296 + -16.3  -3.32698   TCCTGACTGTTTTGG  GCAAACGCTCTCTCACT TCATGCT GGTGGGGGAGCGTTTGC  TGTTCTCTGGAATGA  89 178
NtRootA1_08040 NONE
NtRootA1_08050 NONE
NtRootA1_08060  831541 ..  831559 +  -9.6  -2.95448   CACGCGGAGGATGAC             TGACATCC GGC GGATGTCG             TGTGGTTGGGTTTAC  62 127
       glgE2 NONE
NtRootA1_08090 NONE
NtRootA1_08100  842282 ..  842317 +  -8.2  -4.18094   TGGTTGAAATTATGG    CCGGGCCGTTGCGCAC CCCC GTGTGTGGTGGTCTGG     TTTTCAGCTGGTTTC  74 445
NtRootA1_r00070  844178 ..  844197 +  -9.3  -4.57569   TTTGGCGCACTGTTG            GGTCCTG AGGCAA CAGGACC             TTTTTGCAGCAATGC  87 279
NtRootA1_r00080 NONE
NtRootA1_r00090  847889 ..  847930 + -15.2  -2.71712   CCGGACACACATTAG GTCG-AGACCCCCCAACCC ACACC GGGTCGGGGGGTCTCCCAC ATTTAAACGACACGA  83 40
NtRootA1_08120  849714 ..  849726 +  -4.1  -2.59971   CCTAGAGTCAGGAGA                CTTCG TGC TGAAG                ATTGGTCTCTCCTGA  42 36
NtRootA1_08130  850590 ..  850601 +  -7.2  -3.09834   CAACTGTCGGGCAGC                GGCG TAAG CGCC                 TTCGATAGTGAAGTC  54 383
NtRootA1_08160  854640 ..  854652 +  -3.4  -2.83522   CCGTCCGGCCCGTGC                CAGT CGCAA ACTG                CTTTACTCCAAGGAT  41 106
NtRootA1_08170 NONE
NtRootA1_08180 NONE
NtRootA1_08190  859265 ..  859277 +  -4.8  -2.57132   GTCCGCGGAGCTCAT                GTGG AGGGA CCAC                CTTGTCGGACGAAAC  43 84
NtRootA1_08200  860855 ..  860866 +  -7.2  -3.68351   TTCCTCCCTTAGACG                CGCG CTGC CGCG                 TTTCGGTCCTGCGGC  63 123
NtRootA1_08210  862401 ..  862424 +  -5.9  -2.78935   ATGGCTGCGCGCGAG          GGTCGCCGA GGACTG TCGGCGGGC           TATGCTCCGGCGTAT  47 44
NtRootA1_08220  862945 ..  863001 +   -21  -3.73224   CGCTTAACGCCGAGA CCCGCCCTTGTCCGTCACTC-AGACCGT TCT ACGGTCAAGAGCG-CGGACAAGAGCGGG TTTCGTAGCAGCTAG 100 41
NtRootA1_08290 NONE
NtRootA1_08300  873063 ..  873098 +    -9  -3.18735   GCGTCGACGACTTTT    GGCTGCAGCTGGATGGT TGA ACCATCC-GCCGTGGTC    TTGATGGCATATTCC  61 487
NtRootA1_08360  880391 ..  880446 + -13.3  -3.33483   TTAGGAACTTTCGAC GGCGGCTGGTCACCCTGGGTTTGGGC CTTGC GTTCAA-CCTGGGGTGGCTGGCCGGC TTCGTGATTTCCGTG  83 44
NtRootA1_t00150  880589 ..  880627 + -11.7  -4.86731   CAGGGGGCTCCACCA  ACCCCTCCATTCC-GGCG ATTT TGCCCGGATTGGAGGGGC   TTTTGTTTCCGGGAA 100 29
NtRootA1_08380  883155 ..  883173 +  -5.9  -3.48276   TCCTCCGGAAACCCG             TGCCGGC CGCCT GACGGCA             TTATCTCCACAAACG  55 12
        recQ  887636 ..  887651 +  -7.5  -2.70932   TGGGTTCCCCAGCAG              GCGGC CTGTGC GCCGC               TGGTTCCACGCGCCC  52 156
NtRootA1_08440  891016 ..  891031 +  -2.5  -4.41616   GGCTCCTCGGTGCGA              TCGGT GAGCCA ACCGG               TTTCTTTCAAGGAAT  64 347
NtRootA1_08460  891709 ..  891732 +  -7.4  -3.65046   AAAGTATCGGCGTTG          CGCACGGCGTT GCC ACCGCCGT-CG          TTGTTGAAATAGGCG  62 95
NtRootA1_08490 NONE
NtRootA1_08500 NONE
NtRootA1_08510 NONE
NtRootA1_08520 NONE
NtRootA1_08530 NONE
NtRootA1_08540  900010 ..  900064 +  -7.7  -4.52589   GTTCGGGGCGTTCTA CTACATAAGGTTCGACGGCGACGGT TGGAT AGTGCCGCCGTCGAACCTCGAGGGG TTTTATGTGAGAGAG  78 44
NtRootA1_08550  900815 ..  900839 + -18.6  -4.18018   ACGCACCACGTAAAA          GGGGCGGCAC GCCAA GTGCCGCCCC          TTTTACGTGCCCGGC 100 47
NtRootA1_08560 NONE
NtRootA1_08570 NONE
NtRootA1_08580  902885 ..  902917 +   -17   -4.2349   CTGCAAAACGTTCAA      GCCCCGTCAGGCCA ATGAA TGGCCGGATGGGGC      TTTTGCGTGTCCGCA 100 50
NtRootA1_08590  903827 ..  903837 +  -3.2  -4.78839   CGGGGCGGGGAAAGG                 TCCG TCA TGGA                 TTTTGTTGTCCCCTT  73 152
NtRootA1_08600  904422 ..  904432 +  -6.8  -3.05384   TGCCGACCGGGCGTA                 TCCG AAC CGGA                 TTACCTCAGCCGAAG  54 168
NtRootA1_08610  905268 ..  905282 +  -5.7  -3.32022   CAGAAAAACCACCCA               GCTGT CACAA ACAGC               TTGATATATACCGGA  51 7
NtRootA1_08660  910786 ..  910798 +  -3.3  -2.57757   CAGCCGCGTTGAAGG                CCTTG TTT CACGG                TGAGTTGCATTAATT  40 10
NtRootA1_08670  911116 ..  911169 + -19.8  -3.83409   TCGGTCTGGGCAGAA CCCCGTTTTAAGG-CAATTCACCGC GCGCG GCGGTGAATTGCCCGTTAAGCGGGG TTTCCTGCTGTCTGC 100 44
NtRootA1_08690  913535 ..  913545 +  -2.4  -3.85698   TCGGAAATTGCGGAC                 GCCG CTC CGGA                 TTTGTCGGCCGGCAC  54 398
NtRootA1_08710  915582 ..  915616 + -12.9  -2.78384   TCTGGAAAGTAGCAG    GCCTTTTG-CCGCGCC CGTT GGCGCGGACGAAATGC     TGTGCTCACCGAAGG  73 237
      gcvP_1 NONE
      gcvT_1  919724 ..  919739 +  -4.6  -3.21938   CGCATTGCCGTTCTA              CAAGCG AGTT CGCTAG               TTAGTCGCCTTTTGC  49 10
      gcvH_1  920590 ..  920628 + -20.3  -3.69684   GAACTAAATAATTTG  CGACGCCGGGTTGCCGCC AAAA GG-GGCCGCCCGGCGTCG   TTGTTCGGTCGCTTT 100 188
      sdaA_1  922166 ..  922200 +  -2.1  -3.08812   TGTCAGTCCCTAGTG     CCATGCTGTATCC ATGAGCGGG GGATACGACAGGG     ATTTCTTGCGGGCAC  41 51
NtRootA1_08760 NONE
NtRootA1_08770 NONE
NtRootA1_08780 NONE
NtRootA1_08790 NONE
       macB2  927751 ..  927764 +  -2.3  -3.29043   TGAGGCTGCATGTCC               GCATG GGCA CTTGC                TTCTGAGCACCGATT  44 94
NtRootA1_08810 NONE
NtRootA1_08820 NONE
NtRootA1_08830  931977 ..  931991 +  -4.2   -2.5547   GCGCTGGGAGAAGAA               GATCTG GCG CAGACC               CTTCATATAGCCCCT  41 175
NtRootA1_08860 NONE
NtRootA1_08870  934636 ..  934651 +    -4  -4.58283   GGCTACCAGTAATTT              C-GCTGA CTT TCAGCCG              TTTTTCACCGGGTTC  70 29
NtRootA1_08880  935098 ..  935118 +  -5.3  -3.01134   GTGGCACTTCTGCTT            GCACTCTCC CCG GTCGAGTGC            TAATTATTGATTTAG  48 96
        groE  936946 ..  936959 +  -3.7  -3.31792   GTGGCGACGATATGG               GCGGC ATGG GCGGC                TTCTAAGCCTCCTAA  47 6
        rnhA  938265 ..  938313 +  -7.5  -3.36878   GCAACGGGCTTTGAT G-ACCTGCGGGG-CGGCTG CACAGGGGGAAGA CAGCCGGCCCCGCAGGAGC TTATAGGTAGCTGGA  58 78
        iciA  942680 ..  942702 +  -2.6  -3.72695   CCTAGTCCAGACGTT           CCAGGTGATG GGT CGTGACCTGC           TTTGCTGCCAGCGCT  51 36
NtRootA1_08960  943142 ..  943159 +  -3.3  -3.31144   GTACTATTCCGCCAG             CTGTCCT ATTC AGGCCGG              TTGTGGGCATGGCCG  45 72
NtRootA1_09020 NONE
NtRootA1_09030  951795 ..  951827 + -21.4  -3.76492   GGCGATTAACGGCAG     CGGCGCCGT-CCGGT AAGA ACCGGGACGGCGCCG      TTTCCTGCCCTTGCG 100 32
NtRootA1_09050  954080 ..  954114 +  -5.7  -3.54424   ACCTGCGGATTTCCG    CGACTGATGCTATGGG GACA CCCACAACA-CGGTCG     TTTGGAAAGATAACG  55 103
NtRootA1_09060  955348 ..  955387 +   -10  -2.55213   CATCTGTTGTACCGT  CTAAAGCGCATCGGCTTT TTAG GGGGCCGATGCACTTGAG   TGGATTGCCTAGCTC  62 105
NtRootA1_09070 NONE
NtRootA1_09080  957173 ..  957212 + -22.2    -3.727   CTGATCAAATACTCC  ACAGAACACCCCGCAGGC GCAG GCCGGCGGGGTGTTCTGC   TTTAACTATCGTGGC 100 37
NtRootA1_09090  958025 ..  958073 +  -6.5  -2.96274   CCGCCTGATCGATTT CTGTTGCGCTCCCGCCGTCCGGG TAA TCTGGGCGGATGGAGTTCAACGC TGTGATTCTGGCGGG  51 33
NtRootA1_09100 NONE
NtRootA1_09110 NONE
NtRootA1_09120 NONE
      fdhD_2  963679 ..  963711 +  -3.4  -2.71712   ACTACTAACGCCGTC     CATCATATGCCGGTT CGCC AGCCGGCC-ATGACG      CTTTGCCACCAGCCC  41 131
NtRootA1_09140  967108 ..  967128 +  -2.5  -2.80252   GGCTGGAGCGCCAAG            GCGCG GACGATGCCCA CGCGC            TGCTGTTGTCCGCCT  39 362
NtRootA1_09200 NONE
NtRootA1_09210  974652 ..  974707 +   -28  -3.07113   TGTCCCGGAGCCCAA CTAAGTCGCATTTGTGCGCGTTTTGA GGGC TCAAAACGCGCACAAATGCGACCTAC TTGGGTGACCTCCTA 100 22
NtRootA1_09240 NONE
NtRootA1_09250  977903 ..  977949 +  -2.8   -3.7282   GCGTGGTGGGATTGA TCACGGACGGGAGGGAGTGTTC GGG GACCACTGCCTTGGCTCCGTGC TTCTTGATGCGCTGC  54 512
NtRootA1_09270  978847 ..  978857 +  -6.8  -3.28472   CCCTCACCTCTGTAC                 CGCA GTT TGCG                 TAGTTTTTGATCGCC  56 12
NtRootA1_09280 NONE
NtRootA1_09290  982236 ..  982251 +  -3.9  -3.21934   TGAACGGCCAAAAAA              CCGCG TCATTC TGCGG               GTTTTCTACAGCCGA  47 59
        sucC NONE
        sucD  984564 ..  984620 + -27.5  -3.45571   TAGTACCCAAAGCAA CGCGGGGTCACTTACGGCCCATTCC CGAGTGT GGAATGGGCTCAAAGTGACCCCGCG TTGCTGTTTAAGGCA 100 38
NtRootA1_09320 NONE
NtRootA1_09330 NONE
NtRootA1_09340  987392 ..  987417 +  -5.3  -2.70525   ACAGCAACCCGTCGG         ATGACCGTGGC CCAG GCCGTGGTCGA          GTTCCTTTCCAAGCA  46 66
NtRootA1_09350  989293 ..  989313 +  -3.2  -3.45118   TACCGACCACAAGAA           CCG-CCAGC GCAA GCTGCTCGG            TTGATTCTCAGATAC  47 1
      mmsA_2 NONE
NtRootA1_09370 NONE
        iolG NONE
NtRootA1_09390  993780 ..  993814 + -18.8  -2.81133   AGCGCTCAACACCAA     GAATGCCCCTGTGA CCGAGAA TCACAGGGGCATTC     TGTCATCGATGCGTC 100 39
NtRootA1_09420  996783 ..  996841 +  -5.2   -2.5547   GCAAGGCGTCCGCTA GA-TCC-AG-GCATCCGGCTGCGCGGCGG GGAA CCGCCGCGCAGCCTGACCAACAAGGAGTC ATTCCTATGGCAAAT  46 25
NtRootA1_09430 NONE
NtRootA1_09440  998861 ..  998894 + -13.9  -2.62263   GTTTGTTCGGCGGAC     TTCTGCCCGGAG-CGC CTC GTGGCTCCGGGCGGAG     TCGTGTCCGGCGCCT  74 41
NtRootA1_09460 NONE
NtRootA1_09470 NONE
NtRootA1_09480 1003464 .. 1003480 +  -2.9  -3.33737   TTTTTCCTGATCTTC              TCTCACA TCC TGCGGGA              TTATCGGCATTCCTC  47 63
NtRootA1_09510 1009186 .. 1009202 + -11.5  -3.17051   GTCACCGTAGGTGGC              GGGCTGG TAG CCGGCCC              TGTTGCTCGTGGGGA  67 419
NtRootA1_09550 1012792 .. 1012808 +  -7.9  -2.52516   CCGCTCGGTTGTCTC              TGGTCCG GGG CGGGCCG              CTTCCTCATCCGAAC  53 381
NtRootA1_09580 1015717 .. 1015727 +  -3.2  -3.84961   TTCCGTGCAAGGTCA                 TTCC GTA GGGA                 TTTCCTGCTTGAGTG  56 276
      speB_1 NONE
NtRootA1_09620 1021684 .. 1021719 + -21.2   -2.5955   TAAACAACCAAATCA    ATCAGCCCCCGTACGG AACG CCGTGCGGGGGCTGAC     TGCGTTGTAGGGCCT 100 50
NtRootA1_09630 NONE
NtRootA1_09640 1024574 .. 1024609 + -23.4  -3.05463   GAACAACGGCGGGAC    CAAAAGCGCCGGCTGG GTGA CCAGCCGGCGCTTTCG     TTGCGTGCAGCGGCT 100 105
NtRootA1_09650 NONE
NtRootA1_09660 NONE
NtRootA1_09670 NONE
NtRootA1_09680 1030358 .. 1030370 +  -3.3  -3.62046   GGCCGGCGCAGTATA                TGCGG CCG CCGTG                TTCTTCAACGCCTCG  51 497
NtRootA1_09710 NONE
NtRootA1_09720 NONE
NtRootA1_09730 NONE
NtRootA1_09740 NONE
NtRootA1_09750 NONE
NtRootA1_09760 1041809 .. 1041824 +  -2.5  -2.73364   GGTTGTCAGCTCATT              GTCCT AAGGAC AGGGC               TGGTTCGAGTCCGGA  39 19
NtRootA1_09770 1044306 .. 1044321 +  -3.2  -4.07687   CGCCACTCCAGGACG              GCCATC AGGA GATCGC               TTTTGGAAGGGAAGT  58 457
        lacZ 1047787 .. 1047812 +  -2.5  -2.59267   TTCAGGATCGCGGCT         GCC-GGCTAG CAGGAAC CCAGCCCGGC         CTTCGTCTGCTTGCG  38 17
NtRootA1_09800 1048894 .. 1048910 +  -4.3   -3.3071   AACTCACGATTTCCT              GTGCCAG CTC CCGGTAC              TTGGTGTAGTGGTCT  47 471
NtRootA1_09810 1049533 .. 1049543 +  -4.6  -3.30635   CGTGCCCATGGAGCC                 GGGT TGG GCCC                 TTGTCAGGAGGTTTG  49 370
NtRootA1_09820 NONE
NtRootA1_09830 NONE
NtRootA1_09840 1053921 .. 1053935 +  -7.8   -3.1372   GTTTGATACCAGGTT               GTCCAG GAC CTGGGC               TATTCGTGAGGAGTC  56 332
NtRootA1_09860 1056191 .. 1056224 +  -2.3  -3.69841   ATCAACGGTCGTTGG     CCGATGGAGCTCCATC GCG GA-GGTGCATCATGGG     TATTATTTCTTCCGG  51 84
NtRootA1_09870 NONE
NtRootA1_09880 NONE
NtRootA1_09890 1058309 .. 1058322 +  -8.1  -3.16564   GAAGTCAAGTGCTTT               CTGCC GGTC GGCAG                TTCGTCCGGTGCCGA  58 447
NtRootA1_10080 NONE
NtRootA1_10090 1078206 .. 1078218 +  -4.8  -3.83262   CAGCACCACCTTGAT                GCAG CCGTC CTGC                TTCTTCTGGAATTTC  59 94
NtRootA1_10110 NONE
NtRootA1_10120 NONE
      gmhA_2 1081177 .. 1081200 +  -4.4  -3.47573   CGACGACGCCATGAG          GCTGCGGGGC CAGG GCTAAGCAGC           TTGTGATCTGCCTCG  51 7
NtRootA1_10140 1082381 .. 1082412 +   -26  -2.53581   ACCCCAGCAGGACCG      CGACGCCGGCACTC ACCC GAGTGCCGGCGTCG       TGCGTTAAGCGTGTG 100 50
NtRootA1_10150 1083260 .. 1083283 + -13.8   -4.7373   CCACCGCTCCCTAAG          GGCTCGTCGC GAAT GCGGCGGGCC           TTTTTCGTGCGATCA 100 45
NtRootA1_10160 NONE
NtRootA1_10170 NONE
       derI1 NONE
NtRootA1_10190 1088152 .. 1088168 +  -2.2  -2.79183   TCCAAGACTCCCTAC              TCGGTT GCCAA AGCCGG              TGTCATCGGCCTGAC  39 525
NtRootA1_10220 1091270 .. 1091282 +  -7.7  -3.30731   TCAGGATCGGCGCTG                TGGTG CTT CACCA                TCTTGTCGTCCTTGC  58 438
NtRootA1_10240 1094139 .. 1094160 +  -6.6  -4.87291   TATGGAGACAATCAG           GCTC-CTGG GTTTA CCAGCGAGC           TTTTTCGTTGCGCTG  83 141
NtRootA1_10260 1096892 .. 1096950 + -15.2  -3.72576   CACCCGAGCCACAAA TCCCGGTCTTGTTCGCTAAACCCCACCT ACA AGGTTGCGATCTGCGTACAAGGCCGGGA TTTGCTGCGACGGAC  95 46
NtRootA1_10290 1099448 .. 1099463 +  -3.2  -2.83164   GAGACCCGTCGATCA              CTTCCG GCCG CGGAAA               TGTCATACTCGGTCA  41 63
NtRootA1_10300 1100469 .. 1100525 + -28.9  -3.73775   CTGATGCACGCCGGA CCCGCCCTTGTTCGCTCCACTCACC CTTGTGC GGTGAGTAGTGCGAACGAGGGCGGG TTTCGTCGGGCTCCC 100 65
        acyP 1101050 .. 1101066 +  -5.8  -4.13767   CCACGGCGTTGGCCA              CGGCCA GAGCA TGGCTG              TTTTCAAGTCCGGAG  67 188
NtRootA1_10340 NONE
         uRH 1105304 .. 1105340 + -26.7  -3.61178   GGAGGCAATACATAG    CGACGACGACGGCGGGA AGC TCCCGCCGTCGTCGTGG    TTTAACGTGCCTAGG 100 47
NtRootA1_10370 1107146 .. 1107156 +  -3.2  -3.57144   TGCGCGGCATTACGG                 CTTC ATG GAGG                 TTTGAAAGTCCGAGA  49 115
NtRootA1_10380 NONE
NtRootA1_10390 NONE
NtRootA1_10400 NONE
NtRootA1_10410 NONE
NtRootA1_10420 1114205 .. 1114249 +    -7  -2.79183   GCCGGCGAAGGTGGC GGCGCCGGAGCTGAGCCGGGA GCGG TGCGGGC-CAGGTCCGGTCCC TGTGGTCCGGGTGGC  49 490
NtRootA1_10490 NONE
NtRootA1_10500 NONE
NtRootA1_10510 NONE
NtRootA1_10520 1125625 .. 1125638 +  -6.7  -3.51825   TGGAGGAGTGGACCT               GGATG TCGT CATCC                TTCTCGTTCGGCTCC  57 456
NtRootA1_10540 NONE
NtRootA1_10550 NONE
NtRootA1_10560 1128780 .. 1128794 +  -2.1  -4.33819   GGCCAGGGATAGGAA               GAGCT TTTCC AGTTC               TTTCTTGTCCATGGT  62 281
NtRootA1_10580 NONE
NtRootA1_10590 NONE
NtRootA1_10600 NONE
NtRootA1_10610 1132637 .. 1132664 + -10.8  -4.21607   TCAACACCCCTTGCT        TAATGCGTTAGT GATC ACTAACGTATTA         TTTGTGTTGGATGCC  82 212
NtRootA1_10620 NONE
NtRootA1_10630 NONE
NtRootA1_10640 1134586 .. 1134616 +   -11  -3.75024   CCAGCGGAGGCGTGG       CGACGCTGGGGACG AGC CGCGTCCGGCGTCG       TTCTTGCTGATGACG  76 222
NtRootA1_10660 NONE
NtRootA1_10670 NONE
NtRootA1_10680 1139591 .. 1139622 +  -9.3  -3.53012   GATATGGAGTTCCTT      GGCAGG-CTCGGCC ACGGC GGCCGTGTCCCGCC      TTTCAAGGACAGCGA  65 164
NtRootA1_10700 1140471 .. 1140485 +  -5.7  -3.85698   CGCGGCCTGAGAGGG               CGATG CGCGC CATCG               TTTCTGCAGGAGCAC  61 59
NtRootA1_10720 1142668 .. 1142678 +  -2.4  -3.33696   CCGTGTGAAACTGAA                 CCCC GCA GAGG                 TTCGTTAGCAGAGCC  46 7
NtRootA1_10730 1143311 .. 1143337 +  -7.9  -3.44051   GCTGCCCGCATGGTT        GGGC-TGCCCGG ATGA CCGGGCCTGCTC         TTCTGCTGCTCGCAG  61 68
NtRootA1_10740 1144079 .. 1144109 + -20.5  -2.53409   CTCTAAGCAATACCT       TGGCTGTCGGCCC GAACA GGGCCGACAGCCG       CTTGCTGCCTTGCTC 100 35
NtRootA1_10750 1144602 .. 1144613 +  -4.4  -3.91332   GGTCTGAGCCTCGGC                GATC ACAC GATC                 TTGTTGTGTGCTGGT  59 87
NtRootA1_10820 1149868 .. 1149880 +  -4.7  -3.11768   GTGAGGCTGTAAGGG                CGCTG AGC CCGCG                TGTTCAATCCTGTGC  47 29
NtRootA1_10830 1153337 .. 1153365 +  -3.8  -3.60818   CATGGCGTCGGACAC       CATGGGTG-CCGG AAGG CCGATCACCGATG        TTTGCCGGGTTTTCA  53 497
NtRootA1_10860 NONE
NtRootA1_10870 1157495 .. 1157508 +  -3.8  -3.77722   GCAGGTGCGGCCTTC               TCGC GGCAGA GCGA                TTGTTGCTAGTTCCG  54 405
NtRootA1_10880 1160423 .. 1160467 + -20.1  -3.37245   GGTTCCTCTGAAGAT TTGGCTGCACACTCTTGGGAG TGA CGCCCGAGAGTGTGCAGTCAC TTGATCTTGACATGG 100 79
NtRootA1_10890 1161724 .. 1161768 +   -20  -3.54653   CAACTCACGCTCCAT CCACGGCGACGGTGACAGCG CAAGA TGCTGTCGCCGTCGCCGACG TTGTCTGCTGACCAT 100 330
NtRootA1_10900 1162578 .. 1162595 +  -2.7  -3.75153   TGTTGTGGGACCGGC             GGGAAGTC TGA GG-TTCCC             TTTACGTTGACCGCC  52 124
NtRootA1_10940 1164731 .. 1164771 +   -11   -3.3382   AGTGAACTGCCCGCC GTGGCAGGCGGGGCGGCAG CAGC CTTCCTCGCCGCC-GCCGC  TTGGTCTATGGTGAA  73 59
NtRootA1_10960 NONE
NtRootA1_10970 1170943 .. 1170955 +  -4.1  -3.53012   ACGTGAAGCGATCAG                TCTTG GAG CAGGA                TTTACAACGACACGG  51 307
NtRootA1_10990 1172927 .. 1172946 +  -2.8   -3.4072   GCCACACGAGCCTGC            GCGAGCCGT CAA ACA-CTCGC            TTCTCCTCGGGAGTG  47 272
NtRootA1_11010 1174986 .. 1175000 +  -2.8  -4.39828   AGGCGGCAGGCCACG               CGTG AGGGGTG CACG               TTTTCTCAAAATCTT  64 236
NtRootA1_11020 1176181 .. 1176208 +  -7.6  -3.12351   TAGGACTTCGAGCGT        CGACGGCGGGCT CGGG AGGCTGCGGTCG         TTGAGTATCGAGCAC  57 252
NtRootA1_11030 1178155 .. 1178169 +  -5.6  -3.85698   CGGTGAAGCATCCGT               TGCCGG ACA CCCGCA               TTTATGGGGAGCCGG  61 492
NtRootA1_11040 NONE
NtRootA1_11050 1179411 .. 1179422 +  -5.8  -3.53811   ACTGGGCCTTGGCTA                CCAG ATAG CTGG                 TTTGGAGCCCCTCCA  55 170
NtRootA1_11140 1187297 .. 1187309 +  -5.5  -3.43071   CCTCAAAGGGGGTAA                TCCGG CCA TCGGA                TTGATTAATCTGACG  53 55
NtRootA1_11150 1187723 .. 1187762 + -24.6  -3.29511   TAGTCTTCGGATAAG  CAAGAAAGCAGGGCCGGTC ATT GACCGGCCCTGCTTT-TTG  TTGTGCCCAGGTGGG 100 38
NtRootA1_11160 1188756 .. 1188772 +  -5.8  -4.10161   TAGACGGGGGCTAAG              CGGCCT GTGCA AGGCTG              TTTTGCCACCTAGTC  66 269
NtRootA1_11170 1191421 .. 1191434 +  -2.4  -3.08813   CAGCACGCTGACTCA               CGTT AGGCTG AACG                TATCTTCCAGTACGA  41 30
NtRootA1_11180 1192798 .. 1192850 +  -7.1  -3.65046   GCTGGTCCAGCAGCC GGC-TG--GGCACGACTCCACCTGGGG GTA CTTC-GGTGGAGCCGTGCCGTCGTGCC TTCTTCGCCTGGGAC  63 58
NtRootA1_11190 1194620 .. 1194643 +  -3.1  -4.20367   GGCCTGGCGGGCAAC          GGCGAGC TGATTGGGAT GTTCGCC           TTCTTTGTTGAGCCA  61 295
NtRootA1_11290 1201098 .. 1201109 +  -2.2  -3.45366   TGGCGCTGGCGCTTT                TGGT GGGA ACCG                 TTGGTTCGTTGACAA  46 2
NtRootA1_11300 1202923 .. 1202939 + -10.1  -3.10512   TAGACTCCGCTCATC              GACGCGG CAG TCGCGTC              TCATTTCTTGGGGGT  66 58
NtRootA1_11310 1204934 .. 1204967 + -12.6  -4.57516   TCTAGACATCAGACA    TCGCCCCCCTCTGAGC CTCG GCTCA-AGGGGG-CGA     TTTTCATTTCCCTGT 100 106
NtRootA1_11320 1206051 .. 1206069 +  -6.7  -3.15999   AGCGACCCGGGCCCG            CCC-GCCT GATG AGGCAGGG             TTCAGTGTGTGCCCG  52 68
NtRootA1_11340 1207231 .. 1207244 +  -3.1  -3.06831   GTTGTGCAGATGAAA               CGT-GG TCC CCGACG               TTGCCTCCCGATTGA  43 163
NtRootA1_11350 NONE
NtRootA1_11360 1208371 .. 1208383 +  -4.7  -2.84839   CCCTGCCGATCTTGC                CGGTG AGG CTCCG                ATTTACCTCTCTATG  46 277
NtRootA1_11400 1212109 .. 1212130 +    -8  -4.42639   TTCGACGACGAACAC           GCCTGAGCC TGGGC GGCTC-GGC           TTTTCGTTAGGCTGT  78 20
        purN 1213220 .. 1213231 +  -2.2  -2.79188   TTGAGCCCTCTAAAC                GC-GC AGT GCTGC                TACTTAGATTCCGTC  39 59
NtRootA1_11430 1214242 .. 1214291 + -16.5  -2.70932   TTGGTCACCCAAGTA GGTCGCAGTTGTGCGCGTTTAGG GGGC TCAAAACGCGCTTAAGTGCGACC TAGTTGGGAAAGGAG  87 25
        purH 1219495 .. 1219532 + -21.3  -2.70932   AAAAGTAGTACAACG   CAACGGCGGCCG-CCCCG GGA TGGGGACGGCCGCCGTCG   TAGTTAAACCGGGGC 100 61
NtRootA1_11490 1223118 .. 1223165 + -22.2  -2.55074   TTAATTCCCAACTGG CTCGCAGTTGTGGTTGCTTAGA GAGC TCATGGCAACCACAACTGCGAG TCAGTTGCCGTTAAC 100 37
NtRootA1_11510 1224862 .. 1224872 +  -8.2  -3.15663   GCAAGGCAGCCAGCA                 CGCC AAG GGCG                 TTAATACAGCTGGGT  57 11
NtRootA1_11530 1226738 .. 1226752 +    -7  -3.68445   GGAGATTGACCGTCA               GCGCGG ATG CCGCTC               TTGTTCACGATTTTT  63 135
NtRootA1_11540 NONE
     ABC-NBD NONE
NtRootA1_11560 1230050 .. 1230085 +  -3.9  -3.78953   TGTTGTGGTCGCGGC    TCAGTGAGCTCAACA GTTCGA TGATGTGCTCACCGG     TTTGCTCGTCCAGGT  56 131
         pel 1233891 .. 1233933 + -24.3  -3.11272   ACGGTTCTGGGGAAA GCGAAAGCCCCGGCCCGCAA ATTT TTGCGGGCCGGGGCTGT-GC TGTTAAGTAGTGCTC 100 46
NtRootA1_11640 1240613 .. 1240666 +  -6.5  -4.18018   ACTCCTATTTGGCGT CGGACGCTGTTGCGGTGCAGGCCCAG CAG CTTGGCG-GAACCGTCCCAGCTTCCG TTTTCGCTGAGCCAC  69 149
NtRootA1_11670 NONE
NtRootA1_11680 1247120 .. 1247133 +  -3.8  -3.41527   GGAATCCGGGGTCGG               CGTG CAGGAC CACG                TTGTCCTGGAGGTTG  51 475
      glyA_1 1250573 .. 1250608 + -21.2  -3.07307   ATGGCCCGGAAACAA    CGGGATCCGCCGCC ACACCATC GGCGGCGGGTCCCG     TTGCATGAACCTTTG 100 86
      folD_2 1251569 .. 1251604 + -23.4  -2.52464   CCAGCAGTCGAAAAC    GCAGGGCGTCTACTCC TTCG GGAGTAGTCGCCCTGC     TCCGTTAACCCGACG 100 47
NtRootA1_11740 NONE
NtRootA1_11750 NONE
NtRootA1_11760 NONE
NtRootA1_11770 NONE
NtRootA1_11780 NONE
NtRootA1_11790 1256763 .. 1256773 +  -2.4  -2.73159   TGGAAGCGGCGCAGG                 CACC TTC GGGG                 GTTTGCGACAATTGA  39 59
NtRootA1_11800 NONE
NtRootA1_11810 NONE
       trpS2 NONE
NtRootA1_11830 1260114 .. 1260125 +  -7.2  -3.31792   AAGGCCTGCCGAAGA                GGGC CGGA GCCC                 TTCTCGCCGTCCTGC  58 109
NtRootA1_11850 1261053 .. 1261063 +  -3.2  -3.72576   CGTAAGAGTTGTTTT                 CTTC CAG GAGG                 TTTCATGAACAACCA  52 36
NtRootA1_11860 1261289 .. 1261334 + -11.1  -4.90869   GGCGTTAAGGGTTCG GTAGGTCCGTCGG-GCGAGATA GCG TTTCACGCACCGGCGGATCTCC TTTTTGGTTCGTCCT 100 94
NtRootA1_11890 1266378 .. 1266434 + -19.6  -3.37344   ATAGGCGAACGCCAA CGCGGGGTCACTTAGGGCCCTT ACCAAGGGGAAAC ATGGGCCCTAAGTGACCCCGGG TTGCTTCAGTGGGCG 100 37
NtRootA1_11950 1272305 .. 1272355 + -14.9  -4.07618   TCGCTTATACCGTGA GCCACCTCTTTGGTTGTCCTACGT CTGA ACGCAGCGTAACCAA-GAGGTGGC TTTCGTTCTTCGGAG 100 44
NtRootA1_11960 1273607 .. 1273662 +   -28  -3.06183   CAGGAGTAAACCCAA CTAAGTCGCAGTTAAGCCCGTTTTGA GCTC TCAAAACGCGCTTAACTGCGACTCAG TTGGGTGCCAGTACC 100 32
NtRootA1_11970 NONE
NtRootA1_11980 NONE
NtRootA1_11990 1275671 .. 1275707 + -12.2  -3.14211   CCGACTGTGATGTAG    GCGTGGGCCGGGTGTG ACTTG CACACCCGGCTACTGC    TTGGTAACAAAAAGT  73 31
NtRootA1_12000 1277033 .. 1277069 + -23.8   -5.0538   AAAACAATTCCTGGA    CGCGCCGCCAGTACCG AGTGC CGGTACTGGCGGCTCG    TTTTTTGCCCTGGCC 100 39
NtRootA1_12010 NONE
NtRootA1_12020 NONE
NtRootA1_12030 1281339 .. 1281387 +  -5.1  -2.53876   ACCTGCCGCAAGCGG CATACCGTACGTGAAGGGTTGAC GAT GACGACTCTTCACGAAAGGCGCG TCGATTGGCATGCAC  43 4
NtRootA1_12040 NONE
        deoA NONE
NtRootA1_12060 1283802 .. 1283826 + -11.4  -3.16971   TCTGGCGGCTGACGA          CGGAACGCGT AGTCC ACGCGTACCG          TTAAGTGTGTGATCC  69 64
NtRootA1_12070 NONE
        add1 NONE
NtRootA1_12090 NONE
        eno1 1287920 .. 1287953 + -21.2  -3.82603   CGCGAAAACAGCTGA     CCGGTGGCTATGGT GGAAAG ACCATAGCCACCGG      TTCTGTTTAACGCTT 100 46
NtRootA1_12110 1288944 .. 1288958 +  -4.9  -2.69964   GCAACAGACTAGACG               CGGTG CCCGC CGCCG               TCGTGTCCTTCCAGG  43 29
NtRootA1_12120 1289676 .. 1289707 +  -4.4  -3.05384   GGTCCGGCAGCGAAT      TGGTGGAGGACGC ATGAGCC GCGTCG-CCGCCA      TTGACTGCGGAACCA  47 9
NtRootA1_12130 NONE
NtRootA1_12140 1292107 .. 1292132 +  -4.7  -3.17075   TCTCGTCGTCGGCGG         CGGCTACGT-CG GCC TGTACGTAGCCC         TTAAATTGCAGAAGA  48 117
NtRootA1_12160 1293522 .. 1293560 +   -29  -3.66803   AGTAGTACGCACGTC   CGACGACGGCTGCTCCCC TGA GGGGAGTGGCCGTCGTCG   TTTAAGCTGTTGCCA 100 36
NtRootA1_12170 NONE
NtRootA1_t00170 1294597 .. 1294626 + -20.9  -3.91412   CCTGGGGCACAAGGA       TGGAAGGGGAGGA GGAT TCCTCCCCTTCCA        TTTGTCGGCTATCCT 100 31
NtRootA1_12180 1296197 .. 1296234 + -22.9  -4.22214   ACTAGACCGCAAACA   GAACAGGTCCCCTTCCT CTCC AGGAAGGGGACCTGGTC    TTGTTTTACGTGGGT 100 52
NtRootA1_12230 1301811 .. 1301846 + -21.4  -3.53012   GTCCGCCCGAGTTCA    GGAAAATGCCCCCGAA TTAC TTCGGGGGCATTTTTC     TTTAAACGACAGGCC 100 41
        galM 1306561 .. 1306574 +  -3.8  -2.87132   ACGTGGGGGATTACC               GCCT CCATCT AGGC                TATGTGCGCGGCGGG  44 14
NtRootA1_12280 NONE
NtRootA1_12290 NONE
NtRootA1_12300 1309791 .. 1309835 +  -7.6   -4.7871   ATCTGAGGCAAGCAC GAAAAACGCCGGCCCACCCT GCAAA GGGGTGGACCGGCGTCGGGC TTTTTCGTGCTGCTT  87 35
         mca NONE
NtRootA1_12340 1312703 .. 1312715 +  -6.9  -2.91199   CCCGGATGGTGCTCC                GCGCG ACC TGCGC                TGTGCTTCCGGGTTC  53 382
NtRootA1_12350 NONE
NtRootA1_12360 NONE
NtRootA1_12370 1317384 .. 1317400 +  -8.7  -2.52464   CGGTGGTCCGGTTGA              TGACCTC GCC GAGGTCG              TCGGTTCCCACGAGG  53 511
        hyuA NONE
NtRootA1_12420 NONE
NtRootA1_12430 1325353 .. 1325376 +  -7.3  -3.19371   GCCGGGGCAAGGCGT          CTCGCGGCG ACACTG CTCCGCGGG           TTCACTTCGGTACGT  56 365
NtRootA1_12450 NONE
NtRootA1_12460 1328951 .. 1328968 +  -3.3  -3.56092   CGCTTGAGCACCAGC             CGGGTCT TCGG GGACCAG              TTTCCGCGATGGTAA  51 451
      uppS_1 1330266 .. 1330316 +  -2.3  -3.34517   CGGCCTTCCGGCCGA GCCGCTTCACCATTAG-GCCGGGC GACC GCCCGGGGCTGGAGTCGATGTGGC TATTTCAGAGCAACT  46 217
NtRootA1_12490 1331717 .. 1331762 + -23.3  -2.52464   TCTAACGTTCGATTA GTGTGAAGGGCCGTGGTCCGG TTAG CCGGGCCACGGCCCTTCGCCG TCGCTTAGACACGGC 100 42
NtRootA1_12520 NONE
NtRootA1_12530 NONE
NtRootA1_12540 1335344 .. 1335395 + -27.5  -3.76373   CTGTACGAGGACGGC TTACGACGACGGCCGGCGCCTTT AGTGTG AAAGGTGCCGGCCGTCGTCGTGC TTTGGGTGTTAAGCC 100 165
NtRootA1_12580 1339725 .. 1339737 +  -4.7  -4.20516   TGGCCAGTTGGTAGG                CGCCG TAG CGGAG                TTTGTTCACTGGGAG  65 225
NtRootA1_12640 1346360 .. 1346378 + -10.3  -3.44325   CGCTGCCGCGGACGG             CCGGAAG GCCGG CTTCCGG             TTCGTTGTGGGCCAT  68 252
NtRootA1_12660 1347760 .. 1347795 + -21.2  -2.87132   CTTAAGGAAGTACAC    GTTACCGCCGTCGTGG TTGC CCACGACGGCGGGAGC     TATCTCCCCAGGACC 100 43
NtRootA1_12670 NONE
NtRootA1_12680 1353296 .. 1353309 +  -3.1  -3.34609   GCCGGAAACCACGGA               CATCCG AGC CGG-TG               TGTTCCTTTGCCTGA  47 491
NtRootA1_12700 1353929 .. 1353953 +  -2.7   -2.7185   CCTGCGACGTGCGGC          CCCGGGGAC TCAAATC GTCCGCGGC          TCCTTGCGGGATGCT  39 52
NtRootA1_12710 NONE
        ahcY 1355861 .. 1355889 + -13.8  -3.61103   CAAGCCGCGATGAAA        GGCCGGACACGT GACCA GCGTGGCCGGCC        TTTCGGCTAGAATTG  83 99
        lppS 1357245 .. 1357275 +  -3.9  -3.97834   GTCTTTGATTCTCCT       TACCGGTTCTGGC ATCTG GCCGGACCTGCTA       TTTGTGCTGCCCTTC  60 103
NtRootA1_12750 1358284 .. 1358294 +  -5.4  -2.73124   CCTGGGTGAACGGCA                 GCTT GCG AAGC                 CTTTCGCCGATGGCG  47 108
NtRootA1_12770 1360204 .. 1360220 +  -2.9  -3.76641   CTAGGCGGACACGCC              TGCACCT TAC AGTTGCG              TTTCGATCTTGCCAT  52 37
NtRootA1_12780 1361861 .. 1361872 +  -5.8  -4.26202   CTTGCCGCCCGCGGT                GACC AACA GGTC                 TTTCTTCCTGCCTGT  71 436
        rsmI 1366193 .. 1366203 +  -3.2  -3.67775   GCAGTGCGTGAAGGC                 GTAG ACA CTGC                 TTCTTGCATGGCAGT  52 78
NtRootA1_12820 1367845 .. 1367893 + -35.6  -3.02511   GAACGGTAGAGACAA GCAAAGGGCCCGACTCCGGAGC CATAA GTTCCGGAGTCGGGCCCTTTGC TGTTCCCACGGTGGG 100 88
NtRootA1_12860 1374303 .. 1374361 +   -11  -4.63993   ATTTGGCGGCGCAGA TGCCGGCAGCAGAG--GTGGGACCAGGC TTTTT GCCTGGCCCCTCAGTTTTGCGGCTGGCA TTATTTTTTGCGCTT  93 206
NtRootA1_12870 NONE
        rsmA NONE
        ispE NONE
NtRootA1_12900 1379466 .. 1379478 +  -5.5  -4.09739   GCAAACCCTCTCTCA                CATCC CGC GGGTG                TTTTCCGGACGTTCC  64 171
NtRootA1_t00180 NONE
        glmU NONE
         prs 1383663 .. 1383699 + -18.8  -4.21194   GGACTACTGACATGA   CGGGTCATCCGC-CGCC TCCG GGCGCGTGGATGGCCCG    TTTTCAATAATGAAG 100 45
        rplY 1384554 .. 1384582 + -21.7  -4.45738   GCAAACGCTTTTTGA        GTGGCCGGGTCCC CTT GGGTCCCGGCCAC        TTTCTTCTTCCCCTC 100 57
        spoV 1385389 .. 1385399 +  -3.2  -3.28924   TAAGCGGTGGGGGAC                 CGTC GCG GATG                 TTGTAGCGAAGGATG  45 128
NtRootA1_12960 1388187 .. 1388213 +  -2.2  -3.61398   AGTTTCCGTCAACCG        GGTGCGT-GCC CATGCA GGCTGAGCACC         TTGTTGGCAGGGACG  47 53
NtRootA1_12970 1390891 .. 1390913 + -17.8  -3.67402   AGTAGCCCCGGACGC           CCGCAACCAC CAC GTGGTTGCGG           TATTTTACCAATTAT 100 55
NtRootA1_12980 NONE
        sufS 1395166 .. 1395187 +    -8  -3.61398   CGCCGTGTCTGGCGT           TCGGGCCT ATTTCC AGGCCTGA            TTCTTGCGGCAGCAC  62 4
        nifU 1395961 .. 1395999 +  -3.6  -4.25104   CCAGCCCAAAGAGGT   CGATCCACGCAATGCTGG AAT CCAGGCTCGCGCGGGTGG   TTTTGGTCACCAGGA  64 287
         mfd NONE
NtRootA1_13060 1404113 .. 1404136 + -19.6  -2.92522   GCCAACCAACAAGAA          TGGCCCGGGC ATTC GCCCGGGCCA           TGTCATGTTGCGTGA 100 76
NtRootA1_13180 NONE
NtRootA1_13190 1418237 .. 1418274 +  -4.2   -4.0274   CGGTGTGAAGTCCTC  TGCCGCGACCGTCTGGGGT GCG AGCCCGG-C-GTCGCG-CA  TTGTTTGCTCGTAAC  61 399
NtRootA1_13210 1420488 .. 1420532 + -23.6  -3.86524   GTCACGATTCCAAAA AAGCCGGAGGGGAGCGACGC TCAAC GCGTCGTTCCCCTCCGGCGG TTTCTGCGAAGGTCT 100 40
NtRootA1_13240 1423530 .. 1423541 +  -7.2  -2.88758   TTGGGGTCCTAGCTT                CCCG CTGA CGGG                 TCTATCCGCACTTCT  53 29
NtRootA1_13250 NONE
NtRootA1_13260 NONE
NtRootA1_13270 1426689 .. 1426718 +  -7.7   -3.5774   TGGCTGTGCGGTGAC       GGGCCCAACGGCGG CAA CCG-TGACGGGCCC       TTTGAGCGCTTCAAT  62 434
NtRootA1_13310 1431874 .. 1431914 + -11.2  -2.73364   TACAAGCCCAACGCT TCGCGGACATCCCCAAGGAC ATC GTCCA-G-GGATGTCCGCGC TGCTTGGCGTGCAGC  66 63
NtRootA1_13350 NONE
NtRootA1_13360 1439507 .. 1439518 +  -3.6  -3.60792   CAAGGGCCGGTAAAG                GGCT AGCA GGCC                 TTTAGAGCTTGGCGA  51 20
NtRootA1_13380 1442301 .. 1442313 +  -3.3  -3.78329   CCGTGTTGCCGGTTC                GGCTT GGA GGGCC                TTTGCCTTGATGACA  54 466
NtRootA1_13430 1449767 .. 1449816 + -39.7   -4.5774   GTAGCCTAAGCAGCC CTTAACGACGTCGGCTCCGCACC AGAA GGTGCGGAGCCGACGTCGTTAAG TTTTGGTTCTTAGTC 100 32
NtRootA1_13520 1463218 .. 1463231 +  -6.7  -2.51547   GCGCACCCGAGGACC               GTCTG GTGC CAGAC                ATCTTCCTCTAAGCG  48 0
NtRootA1_13530 NONE
NtRootA1_13540 NONE
NtRootA1_13550 1466063 .. 1466079 +  -4.4  -4.60889   TTTTTGGGTGTTTTT              CTCTCA CATCC TGAGGG              TTTTTGGGGATCGTT  72 63
NtRootA1_13570 1472845 .. 1472858 +  -5.9  -3.25823   CGGAATGCAAGGCTG               CTGGC ACAT GCCGG                TTGGTCTGGACGCCG  51 204
NtRootA1_13580 NONE
NtRootA1_13590 NONE
NtRootA1_13600 NONE
NtRootA1_13610 1483843 .. 1483884 +  -5.8  -4.94902   GAGTAGTGAAGCTGA GCTGTGCCCGGCCTGCA AACACCCGG TGC-GTCCCGGCGCAGC TTTTTGTACTCATTG  83 35
NtRootA1_13620 NONE
NtRootA1_13630 NONE
NtRootA1_13640 NONE
NtRootA1_13650 NONE
NtRootA1_13660 NONE
NtRootA1_13670 NONE
        ligA NONE
NtRootA1_13690 1498203 .. 1498215 +  -3.3  -2.83403   CGCCCTGGAACTCTC                CGGGA AAT TCCCC                CTTTGATCAACGCCC  41 7
NtRootA1_13700 1499533 .. 1499544 +  -7.2  -2.62184   AAACGGTTTCCAGGC                CGGG CCAG CCCG                 TAGTGTCCACGCAGG  51 112
NtRootA1_13720 NONE
NtRootA1_13730 1502107 .. 1502153 + -18.1  -3.07291   ACGCTTACCTACCTG GC-CGGGTTAGCCCGGAATGCCG TAG CGGTGTTCCGGGC-GGCCCGTGC TTCCGTAGCGTAATT 100 46
NtRootA1_13760 1506233 .. 1506289 + -36.2   -3.9644   ACCCCCATCAAGCAA CGCGGGGTCACTTACGGCCCATCCAG ACACC TTGGATGGGCCCTAAGTGACCCCGCG TTGTTGTGTTGCGGC 100 44
        gatC NONE
        gatA NONE
        gatB 1509759 .. 1509814 + -25.8  -5.24129   GGCCTAAGCACCCAA GTAGCTGGCAGTTGTTGTTGTTTTGA GCGC TCAGAACAACCCCAACTGCCAGCTAC TTTTTTGTCCGGCCG 100 34
NtRootA1_13800 NONE
NtRootA1_13810 1511268 .. 1511283 + -10.4  -2.96452   TTGCAGTTGTGCCGG              GCGCTG TCTT CAGCGC               TGTCATTGTGAAGCT  61 414
NtRootA1_13830 NONE
NtRootA1_13840 NONE
NtRootA1_13850 NONE
NtRootA1_13860 NONE
NtRootA1_13870 1518192 .. 1518235 + -20.6  -3.84719   GATAGCTCGATAAGC TCGGTCATGACGGTTTG-AAG TGA CTCGCAAACCGTCATGACCGA TTTCCGTTTCAACGT 100 50
NtRootA1_13890 NONE
         kbl 1521632 .. 1521644 +  -4.8  -2.57564   AGAGCATCGATCTGT                GCAC CCCTC GTGC                CTTCTGACAGGATGG  43 176
NtRootA1_13910 NONE
        hutI 1524093 .. 1524112 +  -2.1  -4.14472   AGGGCTGGGCCGGGC            CAGGACC GCGGTG GGTTTTG             TTTTAGCGGTCTTCA  59 107
NtRootA1_13930 NONE
NtRootA1_13940 1526234 .. 1526244 +  -2.4  -2.90075   CGAGCCATAACCGGC                 CGCG TCG CGCA                 TGTCCTTAGGGGACA  40 31
NtRootA1_13950 NONE
NtRootA1_13960 1528725 .. 1528737 +  -6.2  -3.08706   CTGCAAACGTTGCCG                CGGG CATTC CCCG                TGTTGGCGTGTAGTT  52 0
NtRootA1_13970 1530375 .. 1530395 +  -2.4  -3.33261   TCCTCGTCACCTTTC            CGCTGCAG CACGT CACCAGCG            TTCTCACCATTGGCG  46 66
NtRootA1_13980 1531436 .. 1531453 +  -2.5  -3.28712   TCCTTGACCCCTCCG             CCTAGGC GCCC GCCATGG              TTCTCGGGCACGCAG  44 21
         glk NONE
NtRootA1_14000 NONE
        fbaA NONE
NtRootA1_14020 1535247 .. 1535283 +  -6.5  -3.55761   CCAGCGCATGCAGAA    CAGCCTCATGGTCAGTC CAT GAGTGACCAACAGGGTG    TTTGGGGCATACGTC  59 238
NtRootA1_14040 1537031 .. 1537041 +  -2.4  -3.14132   CCCGGAACAGCGGAG                 CGGC CGA GGCG                 TTCCTCGAAGGGGGC  43 458
NtRootA1_14060 NONE
NtRootA1_14070 1538948 .. 1539004 + -12.2  -3.13403   GCCGTTAAGACCACC CCTGC-GCGGCGTGGCCGCCCGTCGA CGAAAAT TCGCCGGGCGGCC-CTCCGCAGTGCG TGTTCCTGAACGAAG  73 92
        metX 1540557 .. 1540572 + -11.8   -2.8474   GATGGTGGTGGGTTC              CCCGGG ATAG CCCGGG               TAGTTCTGGGTGGGA  67 239
NtRootA1_14120 1543621 .. 1543677 +   -24  -3.34013   CGCGTCTTAAAGCAA CGCGGGGTCACTTACGGCCCAT AAATGGCCTCACC ATGGGCCCTAAGTGACCCCGCG TTGCTTCAGGCGGTG 100 31
NtRootA1_14140 NONE
        glyS NONE
NtRootA1_14160 1547416 .. 1547464 + -22.5  -3.53444   ACCACGTATCTGCAG GTCCGGATCCCGCTTTGCCCATC GCC GATGGGCAGGGCGGGATCCTCGC TTTAAGCCCAGCTCG 100 40
NtRootA1_14170 NONE
NtRootA1_14180 1550574 .. 1550587 +  -5.2  -2.90813   CCGTGGCGGCAGGAG               GGGC CGATTT GCCC                TGATTTGCAACAATG  48 58
NtRootA1_14190 NONE
NtRootA1_14200 1553176 .. 1553202 +    -5  -2.56596   CACTTTGGTAGCACC         GCCAAGCGGCTA GGA TGGTCACGTGGC         TGGCTTGATCAAACG  43 30
        dnaG 1555111 .. 1555127 +  -2.2  -3.23984   ACCGTCCGCGCGGAA             GGTCGCC GGAA GG-GGCC              TTGGTGCTCGATTTC  44 40
NtRootA1_t00190 1555263 .. 1555294 +   -21  -4.83615   CGGAGGAGCGCACAA      TACCCCCGTTCCGG TGTT TCGGAACGGGGGTA       TTTTTATACCCCCTA 100 31
NtRootA1_t00200 1555447 .. 1555485 + -10.9  -5.00884   CAGTCGGAGGAGCGC   AAGGACCCCACACCGGT TTCGT ACTGGTGCGGGGTCCAC   TTTTTTACACGAAAT 100 27
NtRootA1_14270 1562380 .. 1562401 +  -2.3  -2.73364   GAAGAGGAAAGGGGG           ACACC-ATGA GGT TCATCGGTGC           TGGTTCGCATCCGGA  39 70
        pgsA NONE
NtRootA1_14290 1563972 .. 1563990 +  -3.1  -3.02144   CCCGGCGACACCACA             GCATTGA CCCGT TCAAGGC             TGTTCCGCACCGTGA  43 84
NtRootA1_14300 1565259 .. 1565275 +  -5.1  -2.93073   TAGTATTGCTAGAGT              GCATTTG CCC CAACTGC              TGCTTCTTAGCGGCC  46 64
NtRootA1_t00210 1565389 .. 1565425 +   -21  -4.35926   CCTACCTTTACACGG    GAGCCGTGGTTGGCGT TTCAT ACGTCAGCCACGGCTC    TTTTGCGTTTCGGCT 100 35
      gcdH_3 1569763 .. 1569808 + -13.9  -2.89055   CAAGCGGTGGCGCTG CAGTGTCCGGGGGCCAGGGAG CCAA CTGCCTGGCCCTTGCGCACGG TATCTCCGGGCTTTA  77 175
NtRootA1_14340 1570509 .. 1570519 +  -8.2  -2.95298   GGCAGGGTAAGAGCA                 GCCC CAT GGGC                 TCTCTCATGAATGAC  56 289
        rpsB 1571448 .. 1571472 + -12.1  -2.64933   GGGCATCTGACAGGA          TGGCGGCTCAC ACG GTGGGCTGCCG          TCCTGTCAGTCCGTA  69 76
         tsf 1572369 .. 1572394 + -14.7  -4.72272   AGTAATTCATGAAAA         GGGGTGGTCAC TTCG GTGGCCGCCCC          TTTTTCATGCACCCG 100 39
        pyrH 1573241 .. 1573258 +  -8.4  -3.51436   ATATTTCTAGGACCG             TCCGCC CCTCGT GGCGGA              TCTTTACTGTGCATT  66 52
         frr NONE
NtRootA1_14390 NONE
NtRootA1_14400 1575702 .. 1575716 +  -5.6  -3.23692   GCCGAAGAAGTAGTA               GGTACG TTT CGAACC               TTCCTCGTCGTCGTG  51 297
NtRootA1_14460 NONE
NtRootA1_14470 1582696 .. 1582733 +  -3.3   -3.6502   CACTGATTCCGCCGA   GCATCCGCTTGGTCATGG TCT TCTTGTCCGAGCGCA-GC   TTTGAGTGGACACTG  51 476
NtRootA1_14510 1585017 .. 1585042 +  -8.2  -2.62184   GCACCTTCCTGCTCT         TGGCCGGCGG CGGAAA CTGCTGGCCG          TACTGTCCGGGCGGG  53 484
NtRootA1_14540 NONE
NtRootA1_14550 NONE
NtRootA1_14560 1589947 .. 1589973 +  -3.7  -2.60194   GCCGGGCTTTGTCGA        TG-GACAGCATG GTTT CGTGCTGGCCCA         GTTCCTTGACAACCT  41 200
NtRootA1_14610 NONE
NtRootA1_14620 NONE
NtRootA1_14630 1599428 .. 1599440 +  -2.6  -2.88544   AGTTGATGCTCATCG                CCCG CGAGC TGGG                TCTGTAACCGTACGG  40 6
        scoA NONE
        scoB 1601008 .. 1601023 +    -4  -3.61715   AGAGGACCAGGAACT              CAC-CGT ATG ACGCGTG              TTGTTGAGCAGCGTG  51 16
NtRootA1_14660 1601491 .. 1601503 +  -5.5  -4.12198   GAAGCACACGCCGCA                CAGTC CTA GGCTG                TTTTCCGCACTTGTC  66 17
NtRootA1_14670 1602422 .. 1602479 + -20.6  -3.85698   GTCACTAACGACGAA TCCGGCCCTCGTTCGCCCAACACACCG CAGAA CGGCGAGGTGAGCGAAC-AGGGCCGGA TTTGTGGCCGGGCGG 100 33
NtRootA1_14750 1611432 .. 1611460 +  -6.7  -3.27525   GATACGGCGCCCACT       GCCGCGGGAGGCG GCGCA CGTC-CCCG-GGC       TTGCCTTTGAAGCCA  55 327
         dxr 1613932 .. 1613945 +  -2.3  -3.12766   TGGAAGCAGTCCCGT               CGGCA TGAG TCCCG                TCCTTCTTTTCATCC  41 68
NtRootA1_14780 NONE
NtRootA1_14790 NONE
        gcpE NONE
NtRootA1_14810 1617954 .. 1617964 +  -6.8  -4.19953   GCTCACGGTCTCCCG                 CAGC AGT GCTG                 TTTTGGCCTTGGATC  69 267
        proS NONE
NtRootA1_14860 1622936 .. 1622948 +  -6.3  -3.05268   CGTCCCCGGGCTCCG                GCAAA TCC TTTGC                TGTTGGAAGTCCTTC  51 44
        rimP NONE
        nusA 1627575 .. 1627604 + -18.5  -3.63627   GTTCCAGCGGCCTTG       CCGTCCGCGCCGC GCTG GCGGTGCGGCCGG        TTTCGGCTGTCCGGG 100 46
NtRootA1_14920 1628253 .. 1628279 +  -3.8  -3.34013   TGGCCAAGGTCCGCG        TACATGAGCTC GCCAAA GAGCTCG-GTA         TTACTTCCAAAGATG  49 194
NtRootA1_14940 NONE
NtRootA1_14950 1631117 .. 1631167 + -18.3  -4.13654   CCGCGCGTCTAGGTT CCGCT-TGGAGCGGGTCCGTCGGG TAGC CCCGGCGGACCCGTTCCGCACCCG TTTCTACTTTCCAGG 100 29
        rbfA 1631712 .. 1631737 + -19.1  -3.89822   GTTTTCTTGCAGAAA         GGCCGGTTCCT CCTG AGGAACCGGCC          TTTCTGCCGTCCATG 100 43
NtRootA1_14970 1632531 .. 1632541 +  -2.4  -3.25719   CCAGGACGGCGGAGG                 CGGC ATC GCGG                 TTGCTCCTATAGTGG  45 286
        truB NONE
NtRootA1_15000 NONE
NtRootA1_15010 NONE
NtRootA1_15020 1636323 .. 1636357 +  -3.5  -4.96848   GCCGGTAAACTGTTA    CTGGATCCGGCTGC AGTCCGTG GCGGCTGGA-CCTG     TTTTTGTGTGCGGAG  76 67
        rpsO 1636722 .. 1636752 + -19.7  -3.61398   TAGTCTGCCTTTGGG       GGCGGCCCGGTCC CTCGC GGAACGGGCCGCC       TTCTTCAAAAACAAC 100 38
         pnp 1639212 .. 1639255 + -18.8  -3.53224   AGTCTGTAAGCAGTA CCCGGAGGGGCCGGTGGGCT GAAA GGTCCACGGGCCCCTCTGGC TTTACCCGAAAGGTC 100 39
NtRootA1_15050 1640602 .. 1640612 +  -6.8  -3.53012   GTTTGAAGAAAGTGA                 GACC TTC GGTC                 TTTAGGACGCAGCGC  60 10
NtRootA1_15060 1641415 .. 1641438 +   -11  -3.13403   AGAGCCTCGAGGCTG          GATCCTTCCG GGAG CGGATGGATC           TCTTCCTCGACACCC  67 260
NtRootA1_15090 NONE
NtRootA1_15100 NONE
NtRootA1_15110 1646324 .. 1646339 +  -3.2  -2.62184   CACTTAAGGCCCTAC              TCTGGG TACG TCCGGA               TAATCTCCGGGCGCG  40 34
        moeA NONE
        moaC NONE
NtRootA1_15140 NONE
NtRootA1_15150 NONE
        dapB NONE
NtRootA1_15170 1650547 .. 1650559 +  -5.5  -2.87146   CTTCGGCAGTCCACC                CCGCT GGC AGTGG                CTTGTTGTGGAAACC  48 153
NtRootA1_15200 1652713 .. 1652727 +  -4.2  -5.27206   TTCCCGGAACATGGC               CGTGAC AGG GTAACG               TTTTTCTTATGTCTG  84 77
      dapA_1 NONE
         rnj 1655603 .. 1655639 +  -7.2   -3.0263   TCGAGCCCCATGCAC   CGCTGCCATTGCGCATG CTCG CAGGCGCC-TGGCAGGG    TATTGGCCACGTCGT  54 262
NtRootA1_15230 NONE
NtRootA1_15240 NONE
NtRootA1_15250 NONE
NtRootA1_15260 1660032 .. 1660056 + -19.3  -3.64599   GAATTATTAAGAAAA          GGTCCCCAGCC TAC GGCTGGGGGCC          TTTCGCGTCTGGTGA 100 59
NtRootA1_15280 1661072 .. 1661082 +  -3.2  -3.31144   CATTCCACAAGCAAT                 CCGA GGG TTGG                 TTATCCACATAGCCC  45 163
        recA NONE
        recX NONE
        miaB NONE
        miaA NONE
        dapF 1666561 .. 1666579 +  -3.1  -3.61398   GGGGTCTACCTCGGG            CG-GGAGG CTGG CCTTCACG             TTGTTCAAACCCAGG  51 273
        hflX NONE
        dinG 1671180 .. 1671199 +  -5.6  -3.28712   GGAGTGCTGCCACGA            TGTCGCCG TTGA TGGCGTCA             TTCTGGCGGCGGACA  52 193
NtRootA1_15380 1672471 .. 1672505 +  -2.6  -2.89564   GCAGCTGTTCGTTCC     CGCCAATTGAGCGGCC GTG GGCCTATGGGTGGGCG     TCTCTGGCGTCACAG  40 16
      hisC_1 NONE
        hisB NONE
        hisH NONE
NtRootA1_15420 NONE
        hisA 1676034 .. 1676048 +  -4.2  -2.73364   CCCTGGATGTAGCCG               GTCGTC GCT GATGGC               TGCTTCACGTCCCAC  43 15
NtRootA1_15440 NONE
NtRootA1_15450 1678405 .. 1678454 + -30.9  -4.11751   CGTAATACCAGTGAC TAACGACGACGGCGGCCCGACCA CATG TGGTCGGGCCGCCGTCGTAGGTA TTTTGGGCAGTTCCT 100 99
NtRootA1_15480 NONE
        rpmI 1680576 .. 1680588 +  -5.5   -2.5409   CAAGGTCATCAAGAA                GATGC TCG GCGTC                TAAGTTCCAAGTTCT  45 10
NtRootA1_15500 1681506 .. 1681527 +  -8.7  -3.76224   AGCTTGCCGGGCGCC           CGGCC-CGTT TAA AGCGCGGCCG           TTTCCTGGCTGAGGG  69 140
NtRootA1_15520 1682363 .. 1682382 +  -5.8  -3.15579   CGGTATTTCTTGCAA            GA-TCGTCA CGA TGACGACTC            TTCCTGGCCCATTCC  49 50
NtRootA1_15530 1683385 .. 1683413 + -18.3  -4.68209   TCAGCATTAACCAAA        GGTGGGCTCTTCA AAC TGAAGAGCCCATC        TTTCTTTGTTGCGGT 100 62
NtRootA1_15550 1685378 .. 1685389 +  -5.8  -3.64162   TTGCGTTCCGGTAAA                GCCA TGCT TGGC                 TTTGAAGTGATTGAT  57 165
         pcp 1687421 .. 1687442 +  -3.5  -3.59946   GACGCGCACATTAGT           GGACGCTAC ATAG GCGGCGACC            TTCTGTCCTTGCCCC  51 363
NtRootA1_15600 1689169 .. 1689202 +  -9.5  -4.19735   TTCAACTAGACTGAA     GGGTAGTGTCTGCCG TCCG CGGTGAGCACTGCCC      TTTCGTTTTGCAGGC  80 87
        pheS 1690324 .. 1690336 +  -3.3  -3.84961   GATGGAGATCTAACA                GTGCG TAT CCCAC                TTTCCTGGTTGCGTG  55 28
        pheT 1692888 .. 1692913 + -19.1  -5.16572   TCTTATACGACGAAA         TCCCCGGAACC TCCT GGTTCCGGGGA          TTTTTTCACTTGCCT 100 46
        argC NONE
        argJ NONE
        argB NONE
        argD NONE
        argF NONE
        argR 1701253 .. 1701273 +  -3.1  -4.11751   ACCCGGAAACTAACC            GCCGTGGAC GCG GCCCATGAC            TTTTACAGCATTGAT  60 28
        argG NONE
        argH 1703958 .. 1703994 + -17.4  -2.73243   TAAACGCACCATCAA    TCCTGTGGGATGGCAC ATCAC GTGCTGTCCCACAGGG    CTTTAAGGGGTGCGT  89 38
NtRootA1_15730 1704813 .. 1704827 +  -3.4   -4.1235   CTTCTCTCACTTCCT               GCGGCG TTT TGCCGG               TTCTTCTTTCACTTC  60 79
NtRootA1_15750 NONE
NtRootA1_15760 NONE
        tyrS 1711241 .. 1711277 + -23.9  -2.64472   ATCATCGCTCTACCT    GAAAGGGCCGGCAACCG TTA TGGTTGCCGGCCTTTTC    TGCGTTTAAGCGGTG 100 49
NtRootA1_r00100 1713853 .. 1713872 +  -9.3  -4.57569   TTTGGCGCACTGTTG            GGTCCTG AGGCAA CAGGACC             TTTTTGCAGCAATGC  87 279
NtRootA1_r00110 NONE
NtRootA1_r00120 1717583 .. 1717619 +   -18  -2.71712   GCCGGACAACAATTA    ACGGGAAGCCCCGACC ACCAC GGTCGGGGCTTCCCCA    CTTTAACCACCAGAA  89 39
NtRootA1_15790 1719710 .. 1719722 +  -3.3  -3.17054   ACAGGGCACTGACTC                CCAGC ATG GCTGA                TTCACTCATTTCCTC  43 13
NtRootA1_15800 NONE
NtRootA1_15810 NONE
        tlyA NONE
       nadK2 NONE
        recN 1724715 .. 1724731 +  -5.1  -3.55444   TTGCAGGCATGGTAT              TGGGCAA CCA TTGACCA              TTTGGGGAATCCGGA  53 117
        pyrG 1726542 .. 1726559 +  -3.3  -2.91276   CAAGCACTAACGAAG             GACGGCGC GAT GC-CCGGC             ATTTCTGAAACCCCC  42 52
NtRootA1_15860 NONE
        xerD 1728312 .. 1728325 +  -2.3  -4.65895   GCTTCAACCGCGGCT               GTCCC TTAA GGAAC                TTTTTGGGTACCCGC  68 162
NtRootA1_15890 1729557 .. 1729602 + -37.1  -2.71364   ACAGGCTTTCAAGCA TACGACGGCGGGCCGGTCGCC TTTC GGTGACCGGCCCGCCGTCGTA TGCTTCCACCGCTAC 100 44
      dctA_1 1740820 .. 1740848 + -18.2  -3.66178   GATACAAAGCAACAA        GGACCGGCACCC ATGCA GGGTGTCGGTCC        TTTGCCGTTCGCCGA 100 58
NtRootA1_15990 NONE
NtRootA1_16000 NONE
NtRootA1_16010 NONE
NtRootA1_16020 NONE
NtRootA1_16030 NONE
NtRootA1_16040 NONE
NtRootA1_16050 NONE
         der 1749001 .. 1749016 +  -4.7  -3.29109   TTTGGCTCTGATGGC              GTTGG CAACCT CCAAC               TTCGTGTAAGCTTTT  49 64
NtRootA1_t00220 1749185 .. 1749218 + -20.3  -3.84246   CAGCCCGACCAATAA     GGCCGGAATCACGCG GAAA CGCGGGGTTCCGGCC      TTTGGTCGTTAACGA 100 30
        araJ 1752490 .. 1752526 + -26.7  -4.13014   CACGGGAAAGTGAAA    GCCCGCCGTGGAACGGT TTG AACGTTCCACGGCGGGC    TTTTCAGCGTCTCAG 100 48
      gcvH_2 NONE
NtRootA1_16120 1754230 .. 1754256 +  -4.3  -2.77182   CTTGAGCCCTGGCCG        CCCGGCGGGCCA AGTC TGACCC-CGGGG         TACTTGCCTGTGGCA  43 7
NtRootA1_16130 NONE
NtRootA1_16140 1755544 .. 1755554 +  -4.6  -3.59979   CACGACCGGATTTTG                 GGCC CGG GGTC                 TTTGACCTAGGGCCC  53 78
NtRootA1_16150 1756368 .. 1756409 + -19.5  -3.53164   AAGAAGCCTTAGTAA CG-CAAGAAGCCGCCCCCGG ATA CAGGGGGCGGCTTCTTCACG TTGTATGGCTGGTGT 100 71
NtRootA1_16170 1760961 .. 1760987 + -18.8  -4.99134   TCCACCAATGAAAAA         CCCCTTCCGGAG GAA TTCCGGAAGGGG         TTTTTCGTTTGCGGT 100 44
NtRootA1_16190 1764103 .. 1764125 +  -3.2  -4.91511   GGGTGCGCAGCTAGA           TGCGGGCGCC GTC GTCGTCCTCG           TTTTTCTCATGCGGT  76 59
NtRootA1_16230 NONE
NtRootA1_16240 1768620 .. 1768663 + -35.6   -4.9218   GAATGGTGAACTCTA CAGAAGAGGGGCGGTCCGGA TCGA TCCGGACCGCCCCTCTTCTG TTTTTGTCCTGGATC 100 41
NtRootA1_16270 NONE
NtRootA1_16280 1772780 .. 1772799 +    -7  -3.19668   TCAGTCCCTCGCCTG            GTAGCCGG TTAG CCGGCAGC             TTGGATTCCGTCATA  56 42
NtRootA1_16310 1774600 .. 1774613 +  -3.8  -2.57132   TTTAGTCAGTGGCCG               GGCA TAGTAT TGCC                GTTGTGAGGCAGGAA  42 19
      dinB_1 1776004 .. 1776024 +  -5.4  -5.00884   CAGTCGGTCCCAGGA            TGTCCGCT AATAA AGCGGAAA            TTTTTTGGGAACGCT  83 150
NtRootA1_16330 1776605 .. 1776619 +  -7.1  -4.81249   GCAGGCGACACAAAA               GACCC TTTAT GGGTC               TTTTTGCGTTTAACC  84 144
NtRootA1_16340 1777370 .. 1777393 +  -4.4  -3.07443   GGTTTCATCTAACCG          GAAATGGGGC CCTG GCCCCGGTCC           TTGGATGGGATCTCC  47 29
        rsmH NONE
NtRootA1_16360 NONE
NtRootA1_16370 1781074 .. 1781102 + -15.9  -2.70932   TTTGATCCATCACTA        CCGGCTGGGCGCC GCT GGCCCCAAGCCGG        TCGTTCCACCGAGCA  86 71
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
NtRootA1_16430 NONE
        murG NONE
        murC NONE
NtRootA1_16460 1791617 .. 1791630 +  -3.7  -3.90922   GAGCACGTAACCTGC               GGGCC TCGG GGACC                TTATTTCGCGACAAT  57 49
        ftsZ 1793013 .. 1793035 +  -3.3  -2.74461   GATGACCTCGACGTC           CCCGATTTC CTGAA GTAAGCGGG           CTTTGAGAGTCGATA  41 8
NtRootA1_16480 NONE
NtRootA1_16490 1794527 .. 1794551 +  -3.5  -2.90212   GGTAGCGTCAAAGTA          TTGGAATGACG GGC CGGGGTTCCAA          TATGTCAAGTCATGG  42 36
        sepF 1795152 .. 1795181 + -20.1  -3.09289   AACCATCGCTACGAG       GATGCCAGGCGGG TCAA CCTGCCTGGCATC        TGTGTTGCAATAGTA 100 42
NtRootA1_16510 1795610 .. 1795656 +  -3.1  -2.86124   GAGGGTCCGAAGGCC GCAAATTC-TCCAATTCAACAC GATG GTGTTGAATTGGAGGAACCAGA TGATATTTAGGTACC  41 80
NtRootA1_16520 1796437 .. 1796467 + -20.4   -4.4261   GCAAGTATTCTGAAA       GCCGGTGGCTGGGG ACT CCTCCGCCACCGGC       TTTTGCTGTTAACAC 100 40
        lspA NONE
NtRootA1_16540 1798021 .. 1798044 +  -5.2  -2.70932   ACGCGTTGGACCTGC          TGGCCACGGGC TCA GCCTA-GGCCA          TCCTTCCGGGCCGGC  47 6
NtRootA1_16550 1801947 .. 1801957 +  -6.8  -3.32844   TCGCGAAGCGATCTG                 CCAG CGC CTGG                 TTCTCCAGTCCGAGC  55 304
NtRootA1_16570 NONE
        hisD 1804333 .. 1804359 +   -21  -3.84451   CATCGAACGTAAACT         GGTGCCGGAAGA GAA TCTTCCGGCACC         TTTGCGTTTCCGGCA 100 135
        nrdR 1805275 .. 1805301 +    -5  -3.14931   ACCACCTGGACCGCC         GTGGTCGGTAGA GAG TCTTCGGACCCC         TTCCTGGCACATGAA  48 376
NtRootA1_16630 1807839 .. 1807853 +  -4.2  -3.03124   GGTTTGCATACTGCT               TGACGA ACT TCGCCA               TCTTGCCCCCTCGCA  45 142
NtRootA1_16650 1810178 .. 1810200 +  -5.4  -2.62263   CATTCTGTAGGCAGG           GCCAATGAGC CTT GCACGTCGGC           TCATCTCAGCCGGAT  46 31
        glnE NONE
NtRootA1_16670 1813793 .. 1813805 +  -4.1  -2.71144   TTCGTCCCCGGGGAG                CTGTT GTC AACGG                TCGTTGACGACGATC  43 53
NtRootA1_16680 1814183 .. 1814237 +  -5.4  -4.32857   TCAGATGCGTTGTGC TTTCGCTGCGAGCAGGCCGGGCCG CACTGGT CCTCCCGGCATGGCCGCGGCGACG TTTATGTTTGCCGCC  69 147
NtRootA1_16690 1815041 .. 1815081 + -34.3  -4.20817   AGCGGCACGAATAAA  GGAGGGCCGGCAACAGGTT TTT AACCTGTTGCCGGCCCTCC  TTATTTTGGAATCTC 100 46
NtRootA1_16710 1817387 .. 1817415 + -16.8  -4.90266   AACACCAATAAAAAA       CCGCCCC-GTCTC CTTC GAGACAGGGGCGG        TTTTTCGTTGGTGCA 100 85
NtRootA1_16770 1821881 .. 1821899 +  -8.8   -2.7363   CCAGTGAAATCCAGC             GGCGGCAA GCT TTGCCGGC             TCCATTCTTTGGTTC  54 153
        tri2 1826365 .. 1826414 + -23.8   -3.8448   CTGAGCTGGGAACGA GCGAAAGGCCCCGCGGCCT-TCCC TGAC GGGAGAGGCAGCGGGGCCTTT-GC TTTGATGCTGTCTTA 100 75
NtRootA1_16850 NONE
NtRootA1_16860 NONE
NtRootA1_16870 1836823 .. 1836855 + -16.3  -2.91199   TCCGCGTTTGAATGC      CCGTAATGGGCCCGG AAT CCGGGAACATTACGG      TGTCGTTGGCAGTTG  87 108
NtRootA1_16880 1838323 .. 1838361 + -22.6  -5.41143   GGTCCACTCACAAAC   GTTAACGGCCTGATCGGA CTA TCCGATCGGGCCGTTACC   TTTTTTTGGGGCATC 100 44
NtRootA1_16900 NONE
        cydA NONE
        cydB NONE
NtRootA1_16950 1850170 .. 1850187 +  -4.1  -3.06969   TGAACTGGTGAGAGT             GCCTACT CCCC AGTAGCC              TGTTGGCATGCCTTC  45 10
NtRootA1_16960 1851420 .. 1851434 +  -3.4  -3.23216   CGAACGTCCATATTC               GCCGTC GAT GGCCGC               TTGGTCCTGATCCCA  44 240
NtRootA1_16980 1852298 .. 1852328 + -20.5  -3.37245   GGCTAAGGCAAGAAG       CAGGGCCGGCGGT CTGCA ACCGCCGGCCTTG       TTACTGTTCCCGTGC 100 77
NtRootA1_17000 NONE
NtRootA1_17010 NONE
NtRootA1_17020 NONE
         tdk 1860571 .. 1860586 +  -5.4  -3.48668   CGTGTTATGGTCCCC              GGCATC AAGG GATGTC               TTGTCCTCTGCTGCT  53 184
NtRootA1_17050 1862695 .. 1862706 +  -5.8   -5.0133   GGTTCCACGTTCGGC                GGTG GCCT CACC                 TTTTTTGAAGGCCTC  85 269
         dut 1863601 .. 1863622 +  -3.7  -3.91084   CAACGCACCGGTGGC           CTGATAACCC ACG GGGTTG-CGG           TTTACTTGGGGATAG  57 22
NtRootA1_17080 1864460 .. 1864472 +  -4.7  -3.25223   GCAGGCCAGCAGTCT                CCGCC AGT GGGGG                TTCGTGATCTCCCTG  49 63
NtRootA1_17090 NONE
NtRootA1_17100 1865941 .. 1865976 +  -2.5  -3.62597   ACGGCGACGTCCACA    CCCCATGAGTCATTG AACATC CAGTCGTTCTTGGGG     TTGTTGACGCGTCCA  49 395
NtRootA1_17130 NONE
NtRootA1_17140 1870395 .. 1870407 +  -6.9  -3.28712   GCCTCATCGTTCCCG                CCGGT TAG GCCGG                TTATCGCCCGCCACG  56 18
        acnA 1873485 .. 1873501 +  -6.5  -2.57132   CGCAGCATAGCGAGC              CGGCTGG TTT TCAGCTG              ATTCTCCAAACCAGG  48 31
        dxs2 NONE
NtRootA1_17170 NONE
NtRootA1_17180 NONE
NtRootA1_17190 NONE
NtRootA1_17200 1878042 .. 1878087 + -22.8   -3.0806   AAAGGCTCATAGAAG GGGAAGGGCAGTGGCGCGG-GC TTTC GCTCCG-GCCACTGCCCTTCTC TCTTGCCGCTTTAGG 100 47
NtRootA1_17300 1890117 .. 1890159 + -18.4   -2.8092   CGGGTGCAGCACGAA GGAAACGCCGGCCGCAGC TAGTGCT GCAGTGGCCGGCGTTCCC TGTGATGCCATCTTC  86 488
NtRootA1_17340 1893073 .. 1893084 +  -7.2  -3.62046   CAGGAAAGTGATGCA                CGCG GGTA CGCG                 TTCTTCGGCAACTGC  62 174
NtRootA1_t00300 1897238 .. 1897259 + -15.1  -4.39571   TCGCCCACCAAGAAA           GGCCCCCGG ATCT CCGGGGGTC            TTTTGCGTTTCTGGG 100 31
NtRootA1_17390 1898472 .. 1898520 + -18.3  -3.40073   ACGGTCAAGTAGCAT GCCGCGTTTGCCCCGGCACG CTCTAGTTGT TGT-CCGGGGCGAACGCGGC TTCCTTGCTAGACCT 100 29
NtRootA1_17400 1898779 .. 1898807 +    -3  -3.29829   GCCGTGGTGCTCCTT       CTTCCGGT-GGCC GCAA GGCCTGCCGCACG        TTATGGAAGCGTGTG  45 43
NtRootA1_17410 NONE
NtRootA1_17420 NONE
NtRootA1_17430 1901407 .. 1901433 +  -5.1  -3.14878   GCTCCCTCGCTGGTC         AGTATTCGCGG TTATT CGGCGAATACC         TCTTCGGTTCGGACC  47 76
NtRootA1_17450 1903595 .. 1903653 + -21.8  -4.08111   TGTCCTACCTTGTCC AAAGGTCATTACCACGCGAAGAGCGGGC ATT GTCCGCTCTTCGCGTGGAAATAGCCTGG TTTGTCCTGTCTTTC 100 177
NtRootA1_17480 1908950 .. 1908964 +  -2.1  -3.30159   CGTAGGACTGCAACG              C-GGCA TCGC TGCCAG               TTCTGCCGGGGTTGA  44 100
NtRootA1_17510 NONE
NtRootA1_17520 1914054 .. 1914088 + -15.8  -3.18274   CCGCAGCAACCCCAA     GTGGGGAAGAACGC CAACCAC GCGCTCTTCCCCAC     TTGCATTCCCCTGCA  89 120
NtRootA1_17530 1914411 .. 1914423 +  -7.7  -3.61232   GGAATTCTGTCGGTG                CTCTG TGT CAGAG                TCTTTATATGACAGC  62 43
NtRootA1_17540 NONE
        def2 1915973 .. 1915992 +  -3.4  -3.34715   GTGGCGGCAGTTTCG            GGGCTCCC GAGT GAGGGTCC             TCTTTGCAGGAACTC  47 12
         fmt NONE
NtRootA1_17570 1918520 .. 1918532 +  -4.7  -2.63555   ATCGATAAAACAACT                GACCC AAA GGGGC                TGCCTTGTCTCAGTG  43 95
         rpe 1919485 .. 1919495 +  -8.2  -2.78384   GTCCTGAGGGACGCC                 GCGC AGT GCGC                 TGTCGTACACCCCCG  54 287
NtRootA1_17600 NONE
NtRootA1_17610 NONE
        ribC NONE
NtRootA1_17630 NONE
NtRootA1_17640 NONE
        ribH 1924008 .. 1924039 + -16.7  -3.21099   TCAGCAGGCGTTGAA      GGGGATGTGGGTG TGTCTT CACTCACATCCCC       TTCGTCATGCAACGC  90 68
        hisE NONE
        hisG NONE
        hisF 1926456 .. 1926467 +  -3.6  -4.08767   ACCTCTACCCGGGAC                CGGT ACCG GCCG                 TTTTACGGCCCTGAC  60 332
NtRootA1_17690 1928049 .. 1928060 +  -4.4  -3.58536   GTCAGTGGTCTTGAG                CTTG GCGG CAAG                 TTTGGCCGTCGCTTT  53 492
        hisI NONE
NtRootA1_17720 NONE
NtRootA1_17730 NONE
NtRootA1_17740 1931399 .. 1931417 +  -5.9  -3.62046   CAAGCTGCAGAACAA             CGGCCAC TAATC GTGACCG             TTCTTGACGACATCA  55 16
       trpC1 1932261 .. 1932289 + -12.4  -3.30124   AGGCGACAGCCATGA       GGCAGCC-CTGGC ATTT GCCTGCGGCTGCC        TTGTGGCACGTGGAA  75 57
        trpB NONE
        trpA NONE
NtRootA1_17780 1935832 .. 1935850 +  -9.6  -3.37522   CGGGGCCAGCGGTCT             GCGTAACT GTT AGTTGCGC             TTGATTGGCTGGCCT  67 148
NtRootA1_17790 1940572 .. 1940593 +  -2.2  -3.87815   CGAATCCTGGAGGTA           ACCG-GTGG CTGAT CCACGCGGA           TTTCTGAAAGTCCGG  53 14
NtRootA1_17800 1942010 .. 1942027 +  -3.3  -3.29144   CCGGTCGCCCCCACC             GATCGGG CAAT CGCGGTC              TTATAGCGCCGGTAG  45 2
NtRootA1_17810 1943596 .. 1943623 + -25.6  -4.73092   TTCCTCGGTTTGAAA        GCGGGCCCCGCC GTTT GGCGGGGCCCGC         TTTGTTTTGGGTTGT 100 42
NtRootA1_t00310 1944619 .. 1944643 + -17.2  -3.01712   ACGATGTTGTCGCAG          GTCAGGGGCC TATAT GGCCCCTGAC          TGTTGACAAAACCCC  88 39
NtRootA1_17830 1946262 .. 1946284 +  -9.8  -3.10715   AAGTAGCTTTGGAGC           GTCAGCCGAG GCT CTCGCCTGGC           TTCGCTGCTGATAGA  64 466
NtRootA1_17840 1950458 .. 1950484 + -14.5  -2.59935   CAGGACCAGGCCCGC         GTCCGGGTTGG CAACC TCAACCCGGAC         ATTCTCGGCGTCTTT  74 361
NtRootA1_17860 1953152 .. 1953167 +  -2.5  -3.21924   TAGCATGTTTCCACC              GCGCCG CTTGC CGG-GC              TGTTCTCCAGGATGG  43 334
NtRootA1_17880 NONE
NtRootA1_17890 NONE
NtRootA1_17900 1955642 .. 1955663 +  -2.2  -3.53012   CACGCACACCAAGGC           CCCTGGAC GGCACA GTCTATGG            TTTGCGAAGGGGACC  47 221
NtRootA1_17910 1956826 .. 1956849 +    -6  -2.92091   GGTACGGGTGGCCGG          C-CCGCTCCTT ATC AAGAAGCGGAG          TATCTGGGTGCGTGT  51 213
NtRootA1_17920 1957908 .. 1957918 +    -4  -3.03243   GTGCACTCTTGACGA                 TACT TAA AGTA                 TCTTCGACAATAAAT  45 356
NtRootA1_17940 1959104 .. 1959126 +    -9   -2.6574   CCGTCCAAAGGGCCA           GCCACAGGGG CGC CGCCAGTGGC           TACTCTAGATGCTTC  57 200
NtRootA1_17970 NONE
NtRootA1_17980 NONE
NtRootA1_17990 NONE
NtRootA1_18000 1966208 .. 1966224 +  -3.7  -3.17075   CCATCCATGAAGTCG              TGAGC CCAATCA GCTCA              TTCCATTGGAAGACG  45 266
NtRootA1_18010 NONE
NtRootA1_18020 NONE
NtRootA1_18030 NONE
NtRootA1_18040 NONE
NtRootA1_18050 NONE
NtRootA1_18060 1973212 .. 1973224 +  -3.4  -2.57931   GCCCGGGCAGGAAAT                GGAT AGGAG ATCC                CTTCTCAGGGCTGAC  40 59
NtRootA1_18070 NONE
NtRootA1_18080 1974982 .. 1975027 + -14.6  -3.09327   CCTGATCCGCTCCTG CAACTCGCTGCCCACGTCGC ATGGTG GCGACGTGGGCAGCTCGGCG TCTTGGGTCGAATCC  83 36
NtRootA1_18090 1975655 .. 1975669 +  -7.1  -3.33583   CAACACTGAGGACGG               CCACC TCCGT GGTGG               TTGTGGCGGTGTTCT  55 324
NtRootA1_18130 1980725 .. 1980740 +  -3.3  -4.19735   CCTGCTTGCCGTGTC              GTTTC CCCAGA GAAAC               TTTGCTTTTCGGCGA  60 88
NtRootA1_18170 1986424 .. 1986439 +  -3.2  -3.32997   GGGTCGGCAGCGTCG              TTCGGA CTGT TCCGGG               TTCAGTTTCTCCAAG  46 251
      dapA_2 1988494 .. 1988528 + -16.5  -2.71364   GCCTGACCAACCGCA    GGGTGTGCGCGG-CCA AATT TGCACCGCGCACACCC     TGGTTCGACCACTGC  87 35
NtRootA1_18200 1990289 .. 1990303 +  -3.5  -4.14874   TTTGATCTCTATGGA               GGTGT AGCCC ACGCC               TTTTGGAAGTGTTGT  61 337
NtRootA1_18240 1992629 .. 1992676 + -24.4  -3.96327   GGAGGTCCATCGGCC GTCCCAGGAGCCCGGTACCGCC GAGCTA GGCGGTACCGGGCTCC-GG-AC TTTCTCGTGACGGAT 100 270
NtRootA1_18270 NONE
NtRootA1_18280 NONE
NtRootA1_18290 NONE
NtRootA1_18300 1999267 .. 1999281 +    -7  -2.94099   CTTGTCCATGGTCAC               CGCGAG GGA CCCGCG               TATGTCCTGGGGGGC  50 513
NtRootA1_18330 NONE
NtRootA1_18340 2002617 .. 2002637 +  -3.2  -3.50393   AAATCGCCTTGCGTG            ACATGGGC AAGCA GCCTATGC            TTATGTCACATGAAC  49 70
NtRootA1_18350 NONE
NtRootA1_18360 NONE
        paaG NONE
NtRootA1_18380 2006377 .. 2006409 + -26.3  -4.36127   ACCACCGCTCGCCGC      CAGGTCCCCCCGCGC CAG GCGCGGGGGGACCAG      TTTTAAGTTCTTCAA 100 81
        pcaK 2007870 .. 2007914 + -16.6  -3.14211   GTTTCCAGCTGATTC CGAGGGCGAGAAGGCAAGCCCT ATG AGGGC-TGCCTTCTCGTAC-CG TTAATGCGGCAAGCT  89 29
NtRootA1_18400 2009147 .. 2009176 + -17.3  -3.03771   GGACGGTCCTGCATT       TCCAACTACCTCC TTTG GGAGGTAGTTGGG        TGTTCACGGCTGTCG  91 257
NtRootA1_18410 2010826 .. 2010838 +  -4.7  -3.78775   ACCGCCTTCAGGCCC                AGGCG ATC CGCCG                TTTCCTGGTACGAAC  58 232
NtRootA1_18460 2017152 .. 2017174 +  -5.4  -4.07568   CGTCCGTTGGCGACC           CGCGGGGCCA CCA TGATCCCGGG           TTTTCCGGCAAGGGA  64 154
      gcdH_4 2018682 .. 2018700 +  -8.1  -3.02511   CCGTTACTGGAGTCT             CGGCCTT CGTCT GAGGCCG             TCTTCGGAGGGTGCG  57 12
       echA8 2019724 .. 2019734 +  -3.2  -3.86346   TCGACAACCAGGATT                 CAGT GAC GCTG                 TTTCTGCAGCACTGC  55 64
NtRootA1_18510 2024203 .. 2024213 +  -3.2    -2.867   GGGGCTTGACAGTGA                 TGTG GAG CACG                 TGTAATCGTATTGCT  42 59
NtRootA1_18520 NONE
NtRootA1_18530 NONE
NtRootA1_18540 NONE
NtRootA1_18550 NONE
NtRootA1_18560 NONE
NtRootA1_18570 NONE
NtRootA1_18580 NONE
NtRootA1_18590 2034096 .. 2034138 + -30.8  -3.28712   AGGAATTGGGTCTTT GACGTGGTGGCTGGGCTCAG GGG CTGAGCCCAGCCACCACGTG TTGTCAGACCAACGG 100 324
NtRootA1_18620 2037670 .. 2037693 +   -11  -2.78384   TCCATTTAACACATT          CGCGCGG-AGC ACC GCTGCCGCGTG          TATAGTCCGAGGAAG  66 61
NtRootA1_18630 2037959 .. 2037989 +  -6.2  -3.59315   GTGACCCATGCGCAG      GCA-TGACGGCTGG CCTCT CCGGCCG-CACTGC      TTTGACGGTACTTGG  58 37
NtRootA1_18660 NONE
NtRootA1_18670 NONE
        gsiD NONE
NtRootA1_18690 NONE
NtRootA1_18700 NONE
NtRootA1_18710 NONE
NtRootA1_18720 NONE
NtRootA1_18730 NONE
NtRootA1_18740 2050823 .. 2050834 +  -5.8   -2.8619   ACAGTCACCTGCCTA                CCCA TTCG TGGG                 TGTGATGACTTTTCC  47 72
NtRootA1_18760 2053431 .. 2053445 +    -5  -3.70505   TTCGAGGAGGATGCG               GTTGAA GCG TTCGAC               TTTGCCGTTGGTTTG  58 201
NtRootA1_18800 NONE
NtRootA1_18810 2057988 .. 2058003 +  -2.5  -3.95424   ATCCGGAGTCTCAGT              GCTTC CATGCC GGAGC               TTTGATCTTGATCAT  54 463
        iolE NONE
NtRootA1_18840 2061237 .. 2061263 + -23.8  -3.18383   TGAGACGAAACAGAA         GGGCCGGACGCT GGC AGCGTCCGGCCC         TTCCTCGATCACGGT 100 68
NtRootA1_18950 2075435 .. 2075450 + -10.4  -5.10154   TCGGGCACGGCATAA              CCCCTC GTCA GAGGGG               TTTTTGCTTTTAAGT 100 245
NtRootA1_18960 2077004 .. 2077023 +  -2.8  -3.65199   TCGTATTGTCGAGCA            GCTGAG CCAATTAC CTCGGC             TTTAGGTCCACAATT  52 187
NtRootA1_18970 2080126 .. 2080145 +  -4.2  -4.14541   ACCCAGTTGTCGTTC            GTCCCG-CC GGA GGACAGGAC            TTTGTGTGCTTCCTC  63 427
NtRootA1_18990 NONE
NtRootA1_19000 NONE
NtRootA1_19010 2084787 .. 2084833 + -18.1  -2.90496   TGAATCCAGAACCTC CTGCCGCCGTGTCTTGACTGG AATTC CTATTCAGAACACGGCGGCAG TACTTTCCCCACGGC 100 132
NtRootA1_19020 NONE
NtRootA1_19030 2086517 .. 2086556 + -18.6  -3.55548   AATCTGATTGTCCGA  AC-CTGCAGCGCCGGCCTT GGA ACGGCCGGCGCTGCAGCGG  TTTAAACGCCTCTTC 100 34
NtRootA1_19070 2093456 .. 2093476 +  -6.7  -4.11216   GGCCCTAATAGAAGC            GCGTGTCGA TAC TCGTCCCGC            TTTTCCACATCGGCA  69 196
NtRootA1_19080 2095677 .. 2095704 +  -2.7  -4.14874   ACGGTCACCGAATGC        AGGGATGACTT AGAGAG AACTCATCCCA         TTTTACAAATATTCT  59 305
NtRootA1_19090 2096077 .. 2096091 +  -2.1  -3.53012   GCGCTGGCGTCAGAA               TCGAA CTGAA TTCGG               TTTCCCGGACGGCCG  47 57
NtRootA1_19140 NONE
        yesP NONE
NtRootA1_19160 NONE
NtRootA1_19170 2107708 .. 2107720 +  -3.3  -2.80816   ACGCGAAAGGACTGA                CCATG TAC CACGG                TCTCCTCGATACCGG  41 80
NtRootA1_19180 2109228 .. 2109247 +  -7.1  -2.52464   AGTAAGGATTAGGAA            TGCCGTG ATCTTC CACGGCG             TGGATTACAACCCCG  50 29
NtRootA1_19190 2109684 .. 2109694 +  -4.6  -3.24902   CGGGCGTGCTCATCT                 CGGT CGT GCCG                 TTGCTGGTGCTGTTC  49 319
NtRootA1_19200 NONE
NtRootA1_19210 NONE
NtRootA1_19220 NONE
NtRootA1_19230 2114085 .. 2114106 +  -5.1  -4.15508   CCGCAACGGCAGTCC           CCG-GCGATA CGC TAGCGCACGG           TTTTCACACTTCCTT  64 78
NtRootA1_19240 2115099 .. 2115113 +  -4.2   -3.9712   TCGGGACATTCCTGG               CTCTGG TTA CCAAAG               TTTGTGGTCGGGTAA  60 233
NtRootA1_19290 NONE
NtRootA1_19300 NONE
NtRootA1_19310 NONE
NtRootA1_19320 2123791 .. 2123828 + -25.7  -4.33165   GGATCGCAGTGGAAA   CTAGTGGGAGCCGGTCC TTTC GGACCGGCTCCCACTTG    TTTTAGTGCCTTTGC 100 92
NtRootA1_19350 NONE
NtRootA1_19360 2132979 .. 2132996 +  -5.5  -3.13403   TCCGTACCAGGCTCG             GGCTTCG CCAA TGGAGCC              TATTAGTGGAAGAAA  49 157
NtRootA1_19370 NONE
NtRootA1_19380 2135619 .. 2135629 +  -6.8  -3.03124   AGGGTGTCGGACGCA                 GGCT GGC AGCC                 TGTTGACGACTGGAC  54 40
NtRootA1_19390 2136203 .. 2136218 +    -9  -3.22298   TGCGTTAGCCGCTGC              TGCCTG CGAG CAGGCA               TTGGTACTCCATGAG  63 348
NtRootA1_19460 NONE
NtRootA1_19470 2147961 .. 2147971 +  -8.2  -2.90763   CGTCACGGTTGGCCC                 GGGC GGC GCCC                 TCTCTCAGGTCTAGC  56 1
NtRootA1_19480 NONE
NtRootA1_19490 2149455 .. 2149471 +  -2.1  -4.18197   TGTCACCATCAAATA              CGGAAGG TTC CCATGCG              TTTTCAATCAAAGGT  59 128
NtRootA1_19500 NONE
NtRootA1_19510 NONE
NtRootA1_19520 2152017 .. 2152027 +  -5.4  -4.27192   GGTGGTTCGTGACAG                 TGGA CCT TCCA                 TTTTCCTCCCGATTT  69 115
NtRootA1_19530 NONE
NtRootA1_19540 NONE
NtRootA1_19550 NONE
NtRootA1_19560 NONE
NtRootA1_19570 2158608 .. 2158645 + -27.3  -4.01381   AATCCCGGAACAAAA   GAAAGGTGGTACAGGCC GACC GGCCTGTACCACCTTTC    TTCTTTGGCTTCGCT 100 44
NtRootA1_19600 2162235 .. 2162259 +  -9.3  -2.79831   CAGGCCACTCGCCGA          GCGCTCGTT CCGGCAA GACGAGCGC          TGTGATGACGATTGC  61 89
NtRootA1_19620 2166279 .. 2166324 +  -5.9  -3.16564   GGCGCCGCTAGGGCT CAGGGTGCCCCGCGCAGAC TCCTCCTC GTCCGGACGGGGCACCCCA TTGCTAGGATCAACA  49 30
NtRootA1_19630 2167751 .. 2167774 +  -5.3  -2.80016   AAAAACAGCCGTTAT          CTCCGGA GAATCGGCGA TCCGGAG           TCCTTGCTCGTAACC  44 332
NtRootA1_19660 NONE
NtRootA1_19670 NONE
NtRootA1_19680 2173426 .. 2173453 + -22.8  -2.82623   GAAGTCCTAAGCCCA        CTGTGGCCCGGG ACGT CCCGGGCCACAG         TACTTCTGCAACGAC 100 31
NtRootA1_19690 NONE
NtRootA1_19700 2176401 .. 2176419 +  -2.3  -3.05596   CCGGTGCATGGAGCC             GCTCGGC TCGCC GCTGACC             TTGCGTCGCACGATC  41 91
NtRootA1_19710 NONE
NtRootA1_19720 2180276 .. 2180308 + -18.5  -2.73875   GCAAGCCTAGACGAA      ATGGGCGAGGCACTG TTG TAGTGCCTCGCCCAC      TGGTGTTCCAGACCA 100 31
NtRootA1_19740 2184044 .. 2184067 +  -6.6  -2.81173   GAGGAGATCCCACGC          TGCACACGGCC ATC GGCCG-GAGCG          TGTAATCAGCTTGAT  49 111
NtRootA1_19810 NONE
NtRootA1_19820 2193036 .. 2193051 +    -4  -4.34737   GTTTCAGTGACTCAC              CT-AGCC CGT GGCTCAG              TTTATTCGTTGATGA  65 93
NtRootA1_19840 2194509 .. 2194532 +  -4.4  -4.82667   GCACCTCAATCTCAA          CCGGGCCGAT CTCG GTCAGCACGG           TTTTTGATCTCGTGC  77 180
NtRootA1_19860 2195434 .. 2195449 + -10.4  -5.10154   TCGGGCACGGCATAA              CCCCTC GTCA GAGGGG               TTTTTGCTTTTAACT 100 26
NtRootA1_19910 NONE
NtRootA1_19920 2205698 .. 2205709 +  -3.6  -4.21439   TAAGTGTGGCTGACG                CCCT GTGA GGGG                 TTTGTCTTGACATTG  62 226
NtRootA1_19940 2207416 .. 2207431 + -10.4  -5.02715   TCGGGCACGGCATGA              CCCCTC GTCA GAGGGG               TTTTTGCTTTAATGT 100 302
NtRootA1_19950 2209523 .. 2209569 + -18.1  -3.16564   CATTTCCCATTTAGG GGAAGAGAACCCGGATCAGAT TCTTC ACCTGATCCGGGTTCTCGACC TTAGTGACATCCAGG 100 87
         adh 2213208 .. 2213224 + -15.1  -2.97707   GGCTGTTGCTGTTCC              CGGCGGG TGC CCCGCCG              TCGTTGTTGGTGTGG  84 116
NtRootA1_20030 NONE
NtRootA1_20040 2220415 .. 2220435 +  -3.2  -3.18264   GGATTACGCAACTGT            CCGTGAAC TACGC GTTCGGGG            TTGCTGAATCCACGA  45 20
       echA2 NONE
NtRootA1_20060 NONE
NtRootA1_20070 2224527 .. 2224547 +  -3.1  -3.00946   CGCGTTGCTCTGGAC            GCTGTCCGG GCT CCGAATCGC            TGATTTCTACGCCGC  42 2
        mhpA NONE
NtRootA1_20090 NONE
NtRootA1_20100 2228413 .. 2228437 +  -9.9  -3.01924   GGGACATGTCGTCGA          CCAACTCGGGG TGG CTCCGGGATGG          TCTTGGACGCAGGTC  64 93
NtRootA1_20110 NONE
NtRootA1_20120 2230794 .. 2230814 +  -9.1  -3.75933   TGAACCAGTCCGCTA            TGCTTGTTT AGC AAACAAGCG            TTTGGTAGACTATGT  69 38
        fixA NONE
        etfA 2232728 .. 2232739 +  -5.8  -4.11484   CGAGGGGAATGCGGG                GGCT GAAG AGCC                 TTTTGAACGCTTGGC  66 144
NtRootA1_20150 2234239 .. 2234263 +  -7.2  -2.86271   GGCTGGTTCTTCCTT         GC-G-ACCGGTC GGA GACCGGTGCCGC         TCGTTGTGGTCGAGG  51 90
NtRootA1_20160 2235315 .. 2235325 +  -2.4  -2.78384   GGAAGTTACGGGGCG                 CCTC GTC GCGG                 TGTACTGAGCCCCGA  39 7
NtRootA1_20170 2235982 .. 2236026 + -11.4  -2.62184   CTTCCGCGCTCTTGG CCTTGTTGCCGGGCAGCACGG TTCT CTCTGCTGCCCGGTA-CGCGG TGATCTCAACACGCG  66 128
NtRootA1_20180 NONE
NtRootA1_20190 2237449 .. 2237462 +  -3.7  -3.02511   ATTCACTTTAGTCTT               AGGGC GACT GCCCG                TCTTCAGCAACTCCG  45 57
NtRootA1_20200 2239199 .. 2239214 +    -6  -3.07816   GCCAGTGTATATCAT              CCCGCC GAAT GGCGGA               TTCCATGCCTAGCCA  52 296
NtRootA1_20210 NONE
NtRootA1_20220 2241818 .. 2241828 +  -3.2  -3.67597   TAGCGCGTCCTCTAT                 TCAG TTA CTGG                 TTCTTCAATCCAACA  52 42
NtRootA1_20230 2242318 .. 2242335 +  -4.1  -3.96497   TTGGTTCGATACAGG             CAGCTTC GCCT GAACCTG              TTCTTGTCGTTTTGC  60 13
NtRootA1_20240 2244184 .. 2244242 +  -7.8  -3.01712   GCGCCTTAAGCCAAG AGTTGCGCGTGCAGGTGGTCCGGTCGCG CCG CGCAACCCCACCAGCTGCGCGCCCTCCG TCTTGCGCCCCAGGA  56 32
NtRootA1_20250 NONE
NtRootA1_20260 2247087 .. 2247125 + -24.7  -3.53012   GTAGTATTTCGTGCG   GAACACCGGCGCGGAGC GATCA GCTCCGCGCCGCTGTTC   TTTCAGGGACCGGCC 100 66
NtRootA1_20270 2247794 .. 2247823 +  -3.5  -3.40403   ATGGCTTTACCTCGC       GAATCTCTGATCA CCAA TGAGCGGGGAGTC        TTCTGCTGGCGGACC  47 6
NtRootA1_20280 2249344 .. 2249367 + -18.2  -4.33182   TGAGCGAGCCTTCCG          GGGTCGCAGC GGAA GCTGCGACCC           TTCTTTTCTGCCTGC 100 297
NtRootA1_20310 2252705 .. 2252747 +   -22  -3.90112   ACAATGCGGGTTTTT TGGCGGTACCCCAGCGGGGG AGA TCCTCGCTGAGGTACCGCCC TTTGCTTCCAACCAG 100 128
NtRootA1_20390 NONE
        rbsC 2261491 .. 2261501 +  -4.6  -3.08679   AGGTGACACGGTCAA                 GCCG TCC TGGC                 TATTCGATACCCGGG  47 365
NtRootA1_20410 2262519 .. 2262535 +  -4.4  -2.95787   CGGTGGACTGCCCCC             TGCTCCG GGAT CGG-GCA              CTTTAGTATTGGCTG  44 516
NtRootA1_20430 NONE
NtRootA1_20440 NONE
NtRootA1_20450 2264716 .. 2264726 +  -4.6  -3.32844   GGTCGGCTGGACCGG                 CGGC TTT GCTG                 TTGTCAAGTAGCACC  51 4
NtRootA1_20460 2265235 .. 2265251 + -10.1  -3.47349   CCGGACAGACGAACG              GCCTCCG AAG TGGAGGC              TTATGCCTTTCGGCG  69 43
NtRootA1_20640 2287317 .. 2287327 +  -6.8  -4.21194   TTCCTCTCCGCCCTT                 CACC GAC GGTG                 TTTTCGATGGTGCCG  69 98
NtRootA1_20700 2293755 .. 2293789 +    -2  -3.85254   TGCATCCGGAACGCC     TAGGGAATCAACGAGG ACC CCTCCTTCACGCCCTG     TCTTTTCTGGTGCTC  53 149
NtRootA1_20710 NONE
NtRootA1_20720 2297782 .. 2297795 +  -3.7  -3.23447   AAAGTCTACGACTGA               GCCCG TGGA CGTGC                TGTTCTAACCCTTCA  47 26
NtRootA1_20730 NONE
NtRootA1_20740 NONE
        uidA 2302332 .. 2302344 +  -2.6  -2.71144   TAGGAAGCGGTGGTC                CCGC AACTA GTGG                TGATTGCGGCGCGTG  39 16
NtRootA1_20770 2305225 .. 2305241 +  -5.7  -3.33696   CCCCAACGGAAGGAG              GGCGGCC GAT GTTCGCC              TTCATTACCCGGCGA  53 83
NtRootA1_20780 NONE
NtRootA1_20790 NONE
NtRootA1_20800 2308843 .. 2308858 +  -3.2   -3.5764   GCACTCAATGCCGTT              GATGCT TCCT GGCGTC               TTTAGAAGTCACATT  49 5
NtRootA1_20810 2309648 .. 2309661 +  -2.3  -3.33815   ACCCGGCATCTCCTC               CGTTC AAAT GACCG                TTCATTGACCCACAT  46 15
NtRootA1_20820 NONE
NtRootA1_20830 2311986 .. 2311996 +  -6.8  -3.16742   GTGGACCTCCCCGTT                 GGCT CGC AGCC                 TTGGTACGCGTTACA  54 48
NtRootA1_20840 2313202 .. 2313238 + -19.5  -3.39327   AGTAGATGCCCATGA    GAGACTGACGCCGAGCA CTT TGCTCGGCGTCAGTCCG    TTCTGGATGTAGGAC 100 39
NtRootA1_20920 2326587 .. 2326606 +  -5.6  -3.43722   CGGCCCGTGCTCGGG            GGTGACTG ACCG CCGTCGCC             TATTGTGTTCCTGAC  53 408
NtRootA1_20940 NONE
NtRootA1_20950 2329578 .. 2329600 + -17.8  -2.70826   CCGGCTCTCCCCATG           CGGTGGGACA CGG TGTCCCACCG           TGGTGTCTCGATATG  87 155
NtRootA1_20960 NONE
      atrB_2 NONE
NtRootA1_20980 NONE
NtRootA1_20990 NONE
        hyuB 2336858 .. 2336886 + -23.9   -3.0263   GGCTATCGCAACCCA        TCCCGGGGCGGGG TAT CCTCGCCCCGGGA        TGTTCCAACAATCAT 100 67
NtRootA1_21010 2338064 .. 2338105 + -26.7  -5.58454   AAGACAACCACCAAA CAGCAGCCGACGTCGGTAC TTGC GTGCCGCCGTCGGCTGCTG  TTTTTTTCGTGTCCG 100 39
NtRootA1_21020 2340200 .. 2340239 + -20.9  -3.04322   CTGAAACGCGCTAAG CGCACTGGGCGGGACCGCT ACGC AGCGGTCCCGCCC-GT-CG  TCTTACGGGCTTACC 100 27
NtRootA1_21030 2341678 .. 2341708 + -16.9  -4.22678   ATCAGCGCACCAAAA       AGGAGGCCGGATC ATCGC GATCCGGCCTCCC       TTTGTCTTCAGTCTC 100 57
NtRootA1_21050 NONE
      ilvD_2 NONE
NtRootA1_21070 2346739 .. 2346758 +  -2.8  -2.72049   CTGGTACAGTACTCC            CACAATCCG CGT CGG-TAGTG            TGATTCAGCACTCTA  41 3
NtRootA1_21080 NONE
NtRootA1_21090 2349301 .. 2349350 + -28.1  -4.45168   CCTGACCCTTGAACT GCCCGGTTTGGGCACGGATTCTT TCGC AACAATCCGTGCCCGGACCGGGC TTTGTCTTTTAAAGC 100 36
NtRootA1_21100 NONE
NtRootA1_21110 NONE
        rbsB 2352529 .. 2352569 + -21.4  -4.08767   TTCAGGACAGGGACG CGGTAACGGGCACAGTGGA TCCT TCCACTGTGCCCGTT-CTG  TTTTGGCACACTACG 100 46
NtRootA1_21130 NONE
NtRootA1_21140 2356082 .. 2356131 + -14.9  -3.45366   TGATACCCACAATCT GCGGCCCGTACCGCCTGTTCCCTG GCA CTGTGTGCAGGCGTTACGG-CCGC TTCCTTAATTCCAGG  87 327
NtRootA1_21150 NONE
NtRootA1_21160 NONE
NtRootA1_21170 2359030 .. 2359049 +  -5.7  -2.70354   CACCGATCGGCGCGT            TGGCGAT GTGCAA ATCGCCG             TAACTTTCTGGAAGG  46 187
NtRootA1_21220 NONE
NtRootA1_21230 2365175 .. 2365203 +  -2.3  -4.12456   TATGTCGTGCAGTCA        GCATGACTTGTGA TAT TCACTGCGCATGC        TTTTGGGCATGATGT  59 191
       ansP2 NONE
NtRootA1_21260 NONE
NtRootA1_21270 2370674 .. 2370688 +  -3.4  -4.25104   GCGGCGAGGTCCAAG               CCGGCG TCC TGCAGG               TTTTGCTGGGCCAGC  64 319
NtRootA1_21290 NONE
NtRootA1_21300 2374747 .. 2374759 +  -3.3  -2.75481   ACTTCAACGAACTGA                CCGGA GCC TCCTG                TGATTCAGCTTCAGA  41 26
NtRootA1_21310 NONE
NtRootA1_21320 NONE
NtRootA1_21330 2379175 .. 2379193 +  -3.1  -3.17212   GGCGTTGAAGGACTA             GCTGC AGAGTCCAG GCAGC             TTGGTGAGATGGTAC  43 25
NtRootA1_21410 2388775 .. 2388789 +  -7.1  -2.64155   GATTTCTGGTCTGAA               CTGGC GGAAG GCCAG               TGGATTTAGGGGGCA  50 124
NtRootA1_21440 2392260 .. 2392295 +    -9  -3.75153   ATGTAGCTATCTAAA    GCTTTAGATCGGCCTG CTCG CTTGCCCATCTAAAGC     TTTAGATTCCGCACA  69 76
NtRootA1_21450 NONE
NtRootA1_21460 2394921 .. 2394933 +  -2.6  -3.60316   AACTGTAAATTGCAG                CGGT AAATG GCCG                GTTTTTTCGCAGCGT  49 178
NtRootA1_21500 2399793 .. 2399818 +  -3.9  -3.07344   TTCGGAGTGGACGCG         TCCGGGGTG GGACCATG CGCCCAGGA          TCTGTTCACGGATGA  45 254
NtRootA1_21510 2401393 .. 2401403 +  -5.4  -2.83345   CAAAGCCGGGCTGAC                 GTCA TGC TGAC                 TCCTTCGTCTGTGGC  47 16
NtRootA1_21520 2402727 .. 2402739 +  -3.3   -3.0792   TGCCCTGACTTCCTT                GCCCT GAA AGGCC                TTCCATGAGCTCTTC  43 100
NtRootA1_21530 2404034 .. 2404044 +    -4  -2.61718   AGATCCTAGACAGGA                 CAAT CAA ATTG                 AATTTTTCCGACTTC  42 104
NtRootA1_21540 2406343 .. 2406366 +  -8.8  -2.90511   CTGCGGCCCCTGCCT          GCGCC-GCCGA GCC TCGCCCGGCGC          TCCTCTTTGTGCATG  59 203
NtRootA1_21550 2407226 .. 2407251 + -14.7  -3.66378   CACGGCGTCAAGAAG         CGGCGGCTGGA CGGG TTCGGCCGCCG          TTTCGCTGCACTGTC  95 145
NtRootA1_21570 NONE
NtRootA1_21580 NONE
NtRootA1_21590 NONE
NtRootA1_21600 NONE
NtRootA1_21610 NONE
NtRootA1_21620 NONE
NtRootA1_21630 2412788 .. 2412807 +  -5.6  -2.94218   CCGGATGTTGGTGAT            CAACCGGC CGCT GTCGGTGG             TGTCTGGTCCCGGGT  48 185
NtRootA1_21640 2414708 .. 2414722 +  -8.5  -4.34402   AAACCTGATCTGAGG               CGGCG AACAG CGCCG               TTTTAATCTGCCAAA  81 454
NtRootA1_21650 NONE
NtRootA1_21660 2418264 .. 2418275 +  -4.4  -2.52464   AAGCCGCAGCGAAGA                TGGA GTTC TCCA                 TAACTTGACCACACC  43 6
NtRootA1_21670 2419972 .. 2419990 +    -3  -4.58663   CGGCGTCCTTTGACG             CGGGCGTG CGC TATGCCAG             TTTTTCCCGGATGAT  69 296
NtRootA1_21730 NONE
NtRootA1_21740 NONE
NtRootA1_21750 NONE
NtRootA1_21760 NONE
NtRootA1_21770 2430908 .. 2430924 +    -8  -3.29144   GTTGATGAAGTACTT              TCCCGA CAGAA TCGGGA              TTCTCGCAGCGCTCC  58 411
NtRootA1_21800 2431766 .. 2431780 +  -4.2  -3.08812   GAAAACAAAAGTAAA               GGGTCT CTA ACACCC               CTTTCTTACGACACC  45 16
NtRootA1_21810 NONE
       fabG2 NONE
NtRootA1_21830 2434270 .. 2434308 + -31.2  -3.75766   ATCATTAGCAACACC   GCAGGCCCCGTAACCGCT GGA GGCGGTTACGGGGCCTGC   TTGTTGAGTTGTCGG 100 56
NtRootA1_21890 NONE
NtRootA1_21900 NONE
NtRootA1_21910 NONE
NtRootA1_21920 NONE
NtRootA1_21930 NONE
NtRootA1_21940 NONE
NtRootA1_21950 2451709 .. 2451721 +  -4.1  -3.29471   GCCAATTCCGGCGAA                CGACT ACC AGTTG                TTGGTCTGCTGACGC  48 156
NtRootA1_21970 NONE
NtRootA1_21980 NONE
NtRootA1_21990 NONE
NtRootA1_22000 2457264 .. 2457318 + -25.1  -2.91274   AAGCGGTGCTGACCG TGCACGACGATGACCGGGGTCCAGC CAGCA GCTGTACCCCGGTCATAGTCGGGCG TCTCCTTCGGGTCAG 100 134
NtRootA1_22040 NONE
NtRootA1_22050 2465586 .. 2465610 +  -3.3  -3.91897   GAGAACGGGTTGGAT          CCGCGCAGGGC GTT GGTCAGCGCGA          TTTGTACGTGGCCGA  56 305
NtRootA1_22120 2472735 .. 2472760 +  -3.9  -3.56325   GGGCGAGTTGGAGGC         GGTCGATGC GGAGGGTG GCGCCGACC          TTGTCATTGTCGAGG  53 200
NtRootA1_22140 2473633 .. 2473647 +  -8.5  -2.77332   CTAGTGGTGGGTGTC               GCCGC CGGGT GCGGC               CTGTTTAGTTTGGGT  58 325
      cpsY_2 2481296 .. 2481311 +  -4.6   -4.0075   TGACTGCAGTTGGGT              GGGCGG GTCA TTGCCC               TTTCATTGATTGGAT  62 38
NtRootA1_22200 2481504 .. 2481514 +  -4.6   -3.9243   CCGGAACGAATGGAG                 CGCC CCC GGTG                 TTGTTTGACGCATTG  59 7
NtRootA1_22210 2482944 .. 2482954 +  -3.2  -3.01712   CCCTGCGGCGAAATC                 CATG GCC CGTG                 TGTTCCCGAAGACCA  43 504
NtRootA1_22230 NONE
NtRootA1_22240 NONE
NtRootA1_22250 2487010 .. 2487023 +  -2.4  -2.53911   CTGGGCAACTGATCT               TGGA GGAATG TCCA                TGACTTCAGCATTGA  38 29
NtRootA1_22260 NONE
        accD 2490083 .. 2490102 +  -6.4  -4.87893   CGTTCGGCGATGATG            CTCC-CGGC GAC GTCGTGGAG            TTTTTGGTTCCGATT  83 284
NtRootA1_22310 NONE
NtRootA1_22320 2495677 .. 2495701 +  -7.7  -3.73775   ATGGCGATATGCTCG          TCCCCGTCGTG GAC CGGGCCGGGGA          TTTCCTCCCGGTGGA  65 510
NtRootA1_22510 NONE
NtRootA1_22520 NONE
      pfkA_1 2518690 .. 2518719 +  -2.1  -3.86194   CGACGCCGGCTCCGG       GATGGGAGCCCT TACTTCC AGGAC-CCCGTC       TTTATACGACGCCTT  54 154
NtRootA1_22570 2524315 .. 2524325 +    -4  -3.05384   GAGAATGTGGCAGTA                 CAAA TGC TTTG                 TTCGGTGGGAGGACG  45 83
NtRootA1_22580 NONE
NtRootA1_22590 2525358 .. 2525395 +  -2.5  -3.16564   GACACCGAAAGCGTA   G-GCGGGGCCTTTTGGCC CTA GGTCCACATGCCCCGGAC   TTCCTAGGCTCGCAG  41 39
NtRootA1_22600 NONE
NtRootA1_22610 2527109 .. 2527134 +  -3.3  -3.72893   CCAACACCACGCGTT         CTTCCTCCGCGA CGA TTTCGGA-GAAG         TTTCCTGGGGGCATG  54 355
NtRootA1_22650 2530947 .. 2530962 +  -5.4  -4.08692   TCAGTGTCAGATGGG              GCGCATG CGA CA-GCGC              TTTTGCGCCGGATTG  63 364
NtRootA1_22670 NONE
NtRootA1_22680 NONE
NtRootA1_22690 NONE
NtRootA1_22700 2536755 .. 2536767 +  -7.7  -2.72344   GATCTCCTCCACTTC                GAAGG CAA CCTTC                TCGTTGACGGTCAAC  54 174
         pta 2539236 .. 2539253 +  -4.8  -3.18264   TGCCGTCCAGGCACA             GGAGCC AAGCTA GGCTTC              TTCCTCCGTAGCCAC  49 13
NtRootA1_22750 2543230 .. 2543244 + -11.4  -3.53224   CCTCTCCGGGGCCGC               GGCTGG TGT CCAGCC               TTTCCCGCACGGATA  71 233
        ackA NONE
NtRootA1_22780 2548048 .. 2548058 +  -3.2  -4.07568   GGCCGCGGGTACTGC                 CGTT CCA GACG                 TTTTCCGCGCGCCCG  58 442
NtRootA1_22820 2550854 .. 2550875 +  -2.2   -3.9392   TGGCATGCCTCTACG           TGTGGCTG CGCTCA CTGCTACA            TTGTTTCCGATGGGG  53 116
NtRootA1_22830 2551450 .. 2551462 +  -6.2  -3.56092   TCCCACGGGAGCATC                CCGG ATCAA CCGG                TTTCAGCGGTACTGA  58 75
NtRootA1_22850 NONE
NtRootA1_22860 NONE
NtRootA1_22870 NONE
NtRootA1_22880 2555770 .. 2555784 +  -3.4  -2.94322   GCGCCTTCGCCCGTC               CCGGGG AAT CGCTGG               TGGTTTGCGTAGCAT  42 123
NtRootA1_22890 2556056 .. 2556079 +  -8.8  -4.13945   GAACGAATTGGAGAG          TGCTGCGGGA GATG TTCCGCGGCG           TTTTGCGGTGACAAT  76 95
NtRootA1_22910 2558107 .. 2558121 +  -8.5  -3.03243   ATTGCCTGCGCAAGG               GGGCC ATCCC GGCCC               TGTTGGCGGATCAGT  57 230
NtRootA1_22940 2561107 .. 2561132 +  -8.3  -3.60792   GAGCACCCGCTTCGC         CAAG-GTCGCGC ACC GCGTGGCCCTTG         TTTGCCAATTGCCGG  62 524
NtRootA1_22950 NONE
      tauD_1 2563571 .. 2563604 + -16.7  -2.75535   GCCTAGCGCCTTCGA     CGCTGGGCGGCCC CTGTTTGA GGGCCGCCCAGCA      TCCTTCCGGTGTTCC  87 35
        cutM NONE
NtRootA1_22980 NONE
NtRootA1_22990 NONE
NtRootA1_23000 2569124 .. 2569158 +  -2.1  -3.34895   CGATCCGAGTCGGCC    CAGTGA-AGCCGCC CAGCCGAC GCCGGCAGTCACTG     TTGCTTCCGGGTACA  45 380
NtRootA1_23020 NONE
NtRootA1_23030 NONE
NtRootA1_23040 NONE
NtRootA1_23050 NONE
NtRootA1_23060 2575387 .. 2575417 +  -3.2  -3.30741   TAGCGTCGTCGATTC       TCGAGTTCTGGAAG GGG CTTTCATGACCCGG       TTGATAGTTGTCACT  45 0
NtRootA1_23070 NONE
        pecR 2577000 .. 2577016 +  -6.5  -3.02471   CCACCATCGATGTTG              GCGGC GGAGTGG GCCGC              TATGTCTAATCCGAC  52 0
NtRootA1_23090 NONE
NtRootA1_23100 2579384 .. 2579396 +  -3.4  -3.07816   GCACACCTTCGCCGA                TTCC AAGGA GGAA                TTCCATGCCTGAACA  43 1
NtRootA1_23110 NONE
NtRootA1_23120 2580809 .. 2580823 +  -3.4  -3.06796   AATAATCAAGCTTCG               CCTTCG GCT CGGCGG               TTGACTAGCGTCGCC  43 123
        nadX 2581817 .. 2581832 +  -2.4  -3.65902   TCAGGAGGCCTGGCC              GGCTGC GTCC GTTGCC               TTTGCATCAAATGCG  51 127
NtRootA1_23150 2583069 .. 2583116 + -22.2  -3.57144   GCTAGAACCGTTCTG CCGAGAAGCGCGCGTGTCAGCT GGGG AGTTGATACGCGCGCTTCTTGC TTTACAGCTGCCCGG 100 36
NtRootA1_23200 NONE
NtRootA1_23210 NONE
NtRootA1_23220 2590482 .. 2590493 +  -5.8  -3.04792   CGGGTCATCGCGCGG                CTCC GCGG GGAG                 TCTTCAAAATGATCG  49 2
NtRootA1_23230 NONE
NtRootA1_23240 2592510 .. 2592520 +  -8.2  -2.78463   CAGCCGGCGCCGTGC                 CCGC GCC GCGG                 TGTCATAACCGCCGT  54 7
NtRootA1_23250 2594030 .. 2594060 +  -5.4  -3.53012   GACCCCCAACCCCCT       TTTGCATGCGAAGT GCT GTTTCGCATGCCCA       TTTGAAGGAGAAGGA  55 97
NtRootA1_23260 NONE
NtRootA1_23270 NONE
NtRootA1_23280 NONE
NtRootA1_23290 NONE
NtRootA1_23300 2599865 .. 2599878 +  -3.7  -3.56092   TCGTCATCAGGAAGG               GCGCC TCAT GACGC                TTTCAAGCGTGCTGA  51 15
        accC NONE
NtRootA1_23320 NONE
NtRootA1_23330 2602923 .. 2602936 +  -3.8  -4.52589   GTCCACTACGCGGCC               GCAG CCATCC CTGC                TTTTGTCTGAACGGC  68 2
NtRootA1_23340 NONE
NtRootA1_23350 2606279 .. 2606304 +  -2.5  -3.34013   GGGGGACCAGCGGTG         TGGCCCG-GGAA TCA TTCCGCCGTCCA         TTAGTTGGCCCAGTA  46 410
NtRootA1_23370 2606965 .. 2606979 +  -2.1  -3.01712   AGAATTTGCGATCGT              CCGAGT CCAT AC-CGG               TCTTGGACGGCAGGG  40 40
NtRootA1_23380 2607939 .. 2607958 +    -7  -2.78018   TTGCTAGGTTAACCG            CGGGGCCG GGTT TGGGCCCG             TAGTTGCTACCGCGT  51 115
NtRootA1_23390 NONE
NtRootA1_23400 NONE
NtRootA1_23410 NONE
NtRootA1_23420 2612338 .. 2612373 +  -6.8  -3.29144   GCCTCCGTTGGCAGG    CGGCG-TCCTGCCCACT GGC AGTAGGCGAGAGCGTCG    TTGTGAGAGACATGG  55 490
NtRootA1_23460 2616898 .. 2616933 +    -3  -2.71712   GCCCAAAGCCTAGGA    CCTATGCCGGGGGTTC CCAC GGGCCCCCGGCACCCC     ATTTACCGAAAGACA  41 28
NtRootA1_23470 NONE
NtRootA1_23480 NONE
NtRootA1_23490 NONE
NtRootA1_23500 2622005 .. 2622039 +  -2.1  -3.53012   ACGAACACGCCGGAG    TCCACACCCCA-TGAG CCTG CCCAATGTTGTGTGGA     TTTCGACGCACGACA  47 12
NtRootA1_23510 NONE
NtRootA1_23520 NONE
NtRootA1_23530 2628137 .. 2628175 +  -3.6  -3.72576   CGTTGTCCAGGTCCA   CGGCGTGCACCCACACCT CCC GGGTGCGCATCCACACCG   TTTCCTCCGCGGGAA  54 412
        genK NONE
NtRootA1_23590 2634170 .. 2634214 + -36.6  -4.08485   AGCACCCCAGTGTCA GGCGGGCGTACGACGGCGGG TGGCT CCCGCCGTCGTGCGCCCGCC TTTCCTTTCGGTAAA 100 40
NtRootA1_23600 2635445 .. 2635457 +  -4.7  -2.72661   CGAGGCCGAGCTTGG                CGCGG TAG CCGCC                TACTTCGCGATCCTG  44 157
NtRootA1_23620 2637958 .. 2638013 + -23.5   -3.0439   TGAACCCCACCCTGA TGAGCGGCGGCAGGTC-CCCGCGGTTC CGTG GAACCTTGGGTGACCTGCCGCCG-TCG TGCTTTCTAGTCGCT 100 147
NtRootA1_23640 2639961 .. 2639980 +  -7.8  -3.01712   CGCGGAGCGATTGGC            CGTCGTCG TGCT CGATGGCG             TATTCGACGGCGGCC  54 458
NtRootA1_23700 2647099 .. 2647124 + -10.5  -3.53224   AGGCCTGTGATAGTA         GATGTCACCAC GACG GTCGTGACATC          TTTGACCGCCAGATG  68 289
NtRootA1_23750 NONE
NtRootA1_23760 NONE
NtRootA1_23770 NONE
        pdhC NONE
NtRootA1_23790 NONE
      gcdH_5 NONE
NtRootA1_23810 NONE
NtRootA1_23820 2658252 .. 2658268 +  -3.5  -2.82623   CGCATCACCGTTGTC              GGACGGC GCA GCCGCAC              TCATTCTGACCACCC  41 261
NtRootA1_23840 NONE
NtRootA1_23850 2662766 .. 2662780 +  -7.1  -3.34398   TTTCGTCCACGTATC               CCGTG CCCAA CACGG               TGTTTCCACGGCGGA  58 239
NtRootA1_23940 2670441 .. 2670476 + -21.2  -3.09516   TGGGTTAATCCGTAA    GCGGTGCCGGTCGCTC CTGG GAATGACCGGCACCGC     TTACGTGCTAGGGGA 100 48
NtRootA1_23990 NONE
NtRootA1_24000 NONE
       fadE7 NONE
NtRootA1_24020 2680683 .. 2680707 +  -9.9  -2.76263   CGTCCTGATCAACAT          CCGGGCCGC CATACGT GCGTCCCGG          TCCTTCCGTCCTGCC  61 43
NtRootA1_24030 NONE
NtRootA1_24040 2682955 .. 2682965 +  -6.8  -2.83271   GTTGAAGATCCTGCC                 CGCA TCG TGCG                 TCGTTGTCAGCGTCG  50 428
        cebE 2687563 .. 2687591 +  -8.8  -2.71144   GTCCCACCCACCCGA        GTGGCCCTGC GTAAACAGG GCCGGGCCAC        TCCTTGACGGAGGTA  58 43
        cebF NONE
        cebG 2689877 .. 2689887 +  -5.4  -3.85698   CCGGGTTTTGCGCAG                 CTTC GGC GAAG                 TTTATGGACAGGAAA  61 429
NtRootA1_24100 2692265 .. 2692317 +  -7.3  -3.16564   CGGATTCGCTGGGCT GAAAAGT-TGAG--GTCCTCACTGCA CGGT TGCAGTGAGGACTGCTCGGGCTGTTC TTACTGCACTGACCA  54 24
NtRootA1_24130 NONE
NtRootA1_24140 NONE
        ugpE NONE
NtRootA1_24160 NONE
NtRootA1_24170 2700530 .. 2700577 + -18.7  -2.65271   AATGCTGTGCCTTAA C--GCATGTCATCCACCCCGGGA ATGG TCCCGGGGTGGATGACGTGTAAG TGGTCTGGGCTTCTG  95 26
NtRootA1_24220 2707574 .. 2707592 +  -5.3  -2.74012   CTGGTACGTACAGCG            TGTCCAGG AGCA CCTGG-CA             TGATTGAACTCCTCA  47 4
NtRootA1_24230 2709315 .. 2709333 + -10.2  -3.28924   GGCGGTACGCTAGGC             CGTGGCGC GTC GGGCCACG             TTGTAGAAGCGGATG  68 339
NtRootA1_24260 NONE
NtRootA1_24300 2716292 .. 2716319 +  -6.2  -3.75153   GCGCCCAGGCAGCGT        GCCGTTGGGC-CG AAT CGTGCAGAACGGC        TTTGGCTTCGGAGGC  60 111
NtRootA1_24340 NONE
      paaX_1 2721627 .. 2721654 + -17.8  -4.07568   ACGCAACCGAGAAAA        GGGTTGGGGCAGC ATT GC-GCCCCAACCC        TTTTACAAGGAGCCG 100 44
        eutR 2731330 .. 2731344 +  -8.6  -3.02144   CAAAACAATTCAGGC               TACCGA TGG TCGGTA               TGTTCGGCGGCCTCC  60 221
NtRootA1_24470 2735899 .. 2735917 +  -4.4  -3.54475   GAAGGGTAGCAAGGT             TGCCGGCC GCC GTCGGGCA             TTGTGTGGTGGAACC  53 32
NtRootA1_24480 2736497 .. 2736511 +  -2.8  -3.02511   CTAGCATTACCGCAC               GGTG ACGTGCG CACC               TATTACAACCATGAG  43 71
        phnB 2736992 .. 2737029 + -19.9  -2.89881   AGGGCAATGTAGCCT   CGAACGCCTCGTCCGGC TCGC GCTGGACGGGGCATTCG    TATGTCCGGTACCTA 100 50
NtRootA1_24510 2739191 .. 2739207 +  -5.1  -3.74224   TGCGCCTGTAGGTTT              CCTGCAT CTA ATGCATG              TTTCCATGGTTTAGG  56 239
NtRootA1_24520 2740162 .. 2740172 +  -6.8  -3.18912   GAGTTGGGCCTGCAT                 TGCC TCA GGCA                 TTCCTACGTGACTCA  56 4
NtRootA1_24530 NONE
NtRootA1_24540 NONE
NtRootA1_24550 2742418 .. 2742443 +  -8.2  -2.78384   AAAGTTCCAGGCCTA         CGCGCCGGAG CCATGA TTCCAGCGCG          TGTCGTGCGCCGGCC  54 291
      rpoE_1 NONE
NtRootA1_24600 2747926 .. 2747968 + -14.2  -4.82901   AGTTATGCAACACAT TCAGGTCGGGTAGTCATTAT TTC GTGGTGACCACCCGACCTGC TTTTTGTAGACACAG 100 70
NtRootA1_24660 2753099 .. 2753120 + -18.7  -3.88766   AGCAACCGCACAACG           GCCCCCGGC TTAG GCCGGGGGC            TTTGCTGTGTCCGCT 100 427
NtRootA1_24680 2755454 .. 2755489 + -10.4  -3.54475   AGAACCATCAGTTGG    CCGGCGCTGTTGATCGC GGG GCGG-CAGCAGTGGCGG    TTCTGTGATCACCGG  71 461
NtRootA1_24710 2758456 .. 2758489 + -19.7  -3.82097   TCGGTCAGCGGCTAA     GGCCCTTACAGACGG AATT CCATCTGTAAGGGCC      TTTCCTAGGTTTCGC 100 69
NtRootA1_24740 NONE
NtRootA1_24750 NONE
NtRootA1_24760 2765784 .. 2765800 +  -4.4  -2.94416   TTGTTATTAAGAAAG              TTCCCT TGTTC AGGGAG              TGTGTAGTAGCAGTC  44 66
        def1 2766977 .. 2767005 +  -5.2  -3.74693   TGCACGGCTAGCTGG       TC-CGTAGCGGGC TTCA GCCCGTCACGCGG        TTTGATGCAGTCGGC  58 30
NtRootA1_24800 NONE
NtRootA1_24810 NONE
NtRootA1_24820 2771578 .. 2771618 +   -14  -4.18697   GTAACTCTGTTGTGA GGCAGTTGAGCGGTCAGCC AAAT GGCTGGCCGCTCATC-GCG  TTTTGCACTGCTTTT  95 37
      rbpA_1 2772186 .. 2772229 +   -24   -3.3095   TCTTCAAACTCAAGC AAAAAGGCCGGACCGGCTCC TTTG GGAACCGGTCCGGCCTTTTC TTGTGGAAGCTATCT 100 41
NtRootA1_25020 2794393 .. 2794411 +    -8  -3.62597   CATAAGTGCGGCGTC             CATCCCGG ACA CCGGGGCG             TTGTTCCGCAATGCC  62 96
NtRootA1_25050 2797594 .. 2797606 +  -4.7  -3.37796   AGGCGCTCCGATCTT                CAGGC CCT GCCGG                TTCTCGGTGGTGCGG  51 170
NtRootA1_25070 NONE
NtRootA1_25080 2800845 .. 2800855 +  -4.6  -3.53012   TGGTCAAGTCCCTCA                 GCCG CGA TGGC                 TTTCGGAGCAGGCGC  53 76
NtRootA1_25100 2804920 .. 2804940 +  -2.3  -3.73072   GGTTTTGCTCCACGT            AGGCGCGAC CAC GACGCCCCA            TTTCCTCCGCGGCTT  52 232
NtRootA1_25240 2820035 .. 2820049 + -11.4  -3.74693   GCCGAAAGGTCTATT               CCGTGC AAC GCACGG               TTTAGTCAGCTGCCA  78 6
NtRootA1_t00330 2822961 .. 2822976 + -11.8  -5.97575   CGCGCACAAAGAAGG              CCCCGG GAAA CCGGGG               TTTTTTTTGTGCCTT 100 34
NtRootA1_25340 NONE
NtRootA1_25350 2832888 .. 2832931 + -27.5  -4.27686   GAAAGCTTGGCCAAA CCACGACGGCGCCGTCCCC AGTCAA GGGGGCGGCGCCGTCGTAG TTTTCACTGCTTTTC 100 73
NtRootA1_25370 2834214 .. 2834229 +  -6.8  -4.09685   TTCTAGTGTGAAAGG              GTCCGG AAAA TCGGAC               TTTTGGGGGCTACGA  68 30
        glgC NONE
NtRootA1_25390 2837231 .. 2837258 +   -15  -2.98823   ATGAGTTTACAGATT        TGGCCCCTAGGAA TGC TTCC-AGGGGCCA        TATCTGTAAAGAAAA  84 56
NtRootA1_25440 NONE
NtRootA1_25450 2844698 .. 2844712 +  -4.9  -4.03978   GTCCACTCGCTTCTT               GGCGC TGCGC GTGCC               TTTGTCTGAGAGCTT  63 248
NtRootA1_25490 2847928 .. 2847967 +  -2.1  -3.72893   CCTCATCGCCTCGGC GTGAC-C-CGGCCATCGTC GGCC GCCGATCGCTGAGGGTCGC  TTTCCTCCCAGCGTG  51 22
NtRootA1_25530 2853343 .. 2853359 +  -7.3  -3.86897   CGGCTCACCAAACAG              TCGTTGG GCC TCAACGA              TTTCTGGGACGTCGG  68 408
NtRootA1_25550 NONE
NtRootA1_25560 NONE
NtRootA1_25570 2857032 .. 2857044 +  -3.3  -2.61004   TGGGGAGCTGAACCC                GACCG TGC CCGTC                AATTTTTACCCCTCC  40 30
NtRootA1_25580 2857469 .. 2857518 + -18.5  -3.61178   TGTCCTGAGAAACCT CACGCTATAGCCCGTGTCCCGGA AATA TCCGGGGCACGGGCTTCAGCCCG TTTACCATCGATAAA 100 33
      ilvE_1 2858693 .. 2858721 + -14.6  -3.16564   CGACGCTAGCTGGAA        TGCCTCCCGGCA CCCAC TGCCAGGAGGCA        TTCCTCGGGTGAGGC  83 80
NtRootA1_25600 2859553 .. 2859581 +  -8.2  -2.82516   AGCTTTATTTACGGT        CATCTAGGATCC TAGTT GGACTCTAGATG        TATGCTAGTGGAGGC  54 62
        ydeG NONE
NtRootA1_25620 NONE
NtRootA1_25630 NONE
NtRootA1_25640 NONE
NtRootA1_25650 2863067 .. 2863117 + -18.3  -3.18264   CTGGAAGGAACTGAT CCTGCGAGAGACGGGGTGGGATGC CTCT GCATCCCACCCCGTC-CATGCCGA TTGCTGGGTAACGCC 100 27
NtRootA1_25660 NONE
NtRootA1_25670 2865792 .. 2865812 +  -6.7  -3.34013   TTCACCGAGCGACAT            GCCGGCCAC GAA GTAGCCTGC            TTCCTTGAGGACCTC  55 501
NtRootA1_25710 2869521 .. 2869535 + -12.8  -2.61548   GACGGAGAAAGAAGC               GCCGGC CAG GCCGGC               TGCATTCTCGTCCAC  67 469
NtRootA1_25730 2871305 .. 2871321 +  -2.9  -2.50575   GTCATTGACTGTTTC              GCTTCTT GAG ACGGAGC              ATTCCTGCGGCTTTT  39 84
NtRootA1_25740 2871980 .. 2872007 + -19.8  -3.85165   ACTGGAAGAGTAAAA        GGGGCGGCCGCG CATT CGCGGGCGCCCC         TTTCGGTTTCACGTC 100 46
NtRootA1_25780 NONE
NtRootA1_25790 NONE
NtRootA1_25800 NONE
NtRootA1_25810 2877262 .. 2877276 +  -2.1  -3.14881   AGAGGAAGACGCAAT              CC-TGG ATGC CCAAGG               TTACTGAAGCGATTC  41 4
NtRootA1_25820 2878027 .. 2878043 +  -2.2  -4.65895   CGTGGCTGACCATGA              CGACAG CGCCA CTGTAG              TTTTTCAGTGCACCG  68 300
NtRootA1_25840 NONE
NtRootA1_25850 NONE
NtRootA1_25860 2881805 .. 2881860 + -11.8  -3.05384   ACCGGACGTGCCCAA CTAGGTCGCAGCTGAGCGCGTTTTGA CGGC TCTAAACGCGCTCTAATGCGACGCAG TTGGGTCAGAGCCGG  73 22
NtRootA1_25890 2885439 .. 2885473 +   -26  -3.57144   CGCCCGGTAAACGCA     GAAATGGTTCCGGACC TAA GGTCCGGAACCATTTC     TTTGCCCCTGGAGGG 100 54
NtRootA1_25960 NONE
NtRootA1_25970 NONE
NtRootA1_25980 2893764 .. 2893789 +  -8.9  -4.16921   TTGGGCGGGGCTATC         TGGCCAGCGGC TCCC GTTGCTGGCCC          TTTTACGCATTCTTC  78 324
NtRootA1_26000 NONE
        talA NONE
         pgi NONE
       zwf_1 NONE
NtRootA1_26040 NONE
         pgl 2903718 .. 2903760 + -21.4  -4.44448   GCGCGTAACCGCTCC AACGCTCCGGCCAGGACG ATTTCGG CGTCCTGGCTGGAGCGTC TTTCTTTAACGTAAT 100 33
NtRootA1_26210 NONE
NtRootA1_26220 NONE
NtRootA1_26230 NONE
NtRootA1_26240 2925883 .. 2925932 +  -3.3  -3.91897   CCAGCGATCAGGACT GCCACCAGCAGC-AGTCCGTGGCC CAT GGCGATGGTCTGGATGCGGCCGGC TTTGTCAGTCAGCCA  56 363
NtRootA1_26290 NONE
NtRootA1_26300 2932733 .. 2932764 + -24.6  -3.76373   CACCTGACTAAAGCA      GAAGGACCCCTGCC GCAT GGCAGGGGTCCTTC       TTTGGCTATTCAGCG 100 72
NtRootA1_26350 2940590 .. 2940604 +  -3.5  -3.17527   AACGTGACATTGGAA              C-CGGC GGGA GCCGAG               TATTCGTGATGCGTG  44 349
        kynA NONE
NtRootA1_26430 2947253 .. 2947286 + -11.8  -3.14344   GAGTGCCGTTCTTGA     CGACATGG-ACTCCC GTCCA GGGAGTACCACGTCG     TTGCTGCGAACAGTC  73 39
      paaX_2 2948126 .. 2948154 +  -5.2  -3.69323   ACAGTTGCAGTTCGT       CGGCAGTTG-CGG TTCG CCGGCAGCCGCTG        TTTAGGTAGTGCTGC  58 52
NtRootA1_26460 2950449 .. 2950474 +  -6.7  -3.06737   AGGAAAACACCGAAC         CGGCGGTTGTC CGGT GACGCCCGCGG          TGTTGGGACTTCATA  52 9
NtRootA1_26470 2951391 .. 2951407 +  -3.6   -4.1585   ACGGCAGTTGATACA              GCCCTG ACTCC CAGGGA              TTTTGACCCTTCTAA  62 19
NtRootA1_26480 2952509 .. 2952565 +  -3.7  -2.53876   ACTGAAACCTGGTAG GCGCCGGTGGGTGCGTGGCTGGATGTG CACGC CGCATCCAGCCACG-AGG-ACCGATGA TGCGTTCAGGTAACC  41 26
NtRootA1_26490 NONE
NtRootA1_26500 2954846 .. 2954870 +  -9.9  -3.37344   CCGGAAAGACAGTGC          CGTCCGTCCCG GGA TGGGGTGGGCG          TTGCTTGGCTCGGAA  67 89
NtRootA1_26510 NONE
NtRootA1_26520 2956732 .. 2956744 +  -4.8  -2.71712   TGGCTGCGCGGAACG                CGTG ACGTC CACG                GTTTCACCCCGCACC  44 442
NtRootA1_26550 2959614 .. 2959626 +  -5.5  -4.56597   GCTGCGTCCGAGGAA                TCCAC GCT GTGGG                TTTTTCCGCCCACCA  76 352
NtRootA1_26590 NONE
NtRootA1_26600 2966249 .. 2966270 +  -5.8  -2.87211   TCTTCGGGCCAGGGA           TGCTTGGG GTAGCG CCCACGCA            TCTCTGCCCGAACCT  48 106
NtRootA1_26630 2970793 .. 2970806 +  -3.8  -4.24342   CCTAATAATGTCAGA               CCCT GGTGAG AGGG                TTTATTCATGGGAAG  62 58
NtRootA1_26640 2973118 .. 2973129 +  -3.6  -4.64846   CTGCACCCGTCTGGG                CGCT TACT GGCG                 TTTTCTGGTTTGTAA  70 107
NtRootA1_26690 NONE
NtRootA1_26700 2980663 .. 2980678 +  -5.4  -2.64274   TCGTCGTCGTTCATT              GCAGCCG CAT CGG-TGC              TGAGTTTGACCGCGT  43 215
NtRootA1_26720 2981432 .. 2981456 +  -7.8  -4.49756   TGGCGTGAATTGCGC         CCGGG-CGGGT TCAT GTCCGTCCCGG          TTTTACTGTTTGCCC  78 33
NtRootA1_26740 2982378 .. 2982392 +  -5.6  -3.48276   CGGCCGGGAATCATG               CGGAAC ACC GGTCCG               TTATCTACACAGGCC  55 65
NtRootA1_26750 2982889 .. 2982909 +  -5.3   -3.0806   ACTCCAGCAGCTGCA            GCTGGCCAT CGA ATGTCCTGC            TGTTCACCATTTCAA  47 56
NtRootA1_26790 NONE
NtRootA1_26800 2986222 .. 2986235 +  -3.7   -4.1466   AGGCCAACCGGGACA               GTGGG AGCG CCCCC                TTTTGGCAATTGGCT  62 108
NtRootA1_26810 2986656 .. 2986698 +  -6.9  -4.17023   GATCAGTGCGGTAGC CG-CCGTCGAGCGGTAAATG CATT CCTTTGCCGCACTGCGGACG TTTTCGCGTGGTTGG  71 10
        thrA NONE
NtRootA1_26830 2989318 .. 2989362 + -16.4  -2.71791   TAGACCAGACTGTGC CGATCCGGCGTTGCGTAACC ACTTC GGTTCCGCAGCGCCGGAACC ATTTAAGCCCAGCAT  86 64
NtRootA1_26880 2994580 .. 2994590 +  -4.6  -3.14564   TGGGCCGGCAAGGAA                 TGGC CCG GCCG                 TTCGTAACCGGATGC  47 8
NtRootA1_26900 2995561 .. 2995575 +  -2.8  -2.79796   CGCCAGTCCAAGGTC               TGAAAG GGT CTCTCA               TGTACTAGGCTGAAG  41 23
NtRootA1_26910 2996257 .. 2996272 +  -6.8  -3.06831   CGATACCGAGCTCAG              CGGGTG AGAA CACCTG               TTCAGTGACAGTTCC  51 377
        ctaE 2997831 .. 2997857 +    -3  -2.71712   CTGAAGTAGCCCGGC         TTTGACTCTTTT TCT ACAAGAGGCAGA         ATTTCAAGAAGCGGC  41 32
NtRootA1_26940 2998722 .. 2998739 +    -7  -3.57263   CGAGACAACAAACTT             CTGCTG CATGCT CAGCAG              TTTCGAACTGAAAAT  60 47
NtRootA1_26950 NONE
NtRootA1_26960 3001530 .. 3001580 + -26.5  -3.61922   CCACTAGTTACAGCT TGAAACCAGGGAAGGGCACGATCC ATAC GGATCGTGCCCTTCCCTG-TTGCA TTTGCCATCACTGTT 100 34
NtRootA1_26980 3002932 .. 3002967 + -30.6  -3.55173   AAGAGGCAACATAAC    GACGACGGGCCCCACC TTTT GGTGGGGCCCGTCGTC     TTATGCTGTTCTGCT 100 90
NtRootA1_27040 3008206 .. 3008220 +  -7.8  -3.31365   TTCCGTCGCTGATTC               TGCGGG ATC TCCGCA               TGTTCTGATGTCATG  59 126
NtRootA1_27050 3008971 .. 3009026 + -20.6  -3.38339   AAAGAGGCCCCAACC CACTAC-TTACACGAAGACCCCGGACC ATT GGTCCGGGGTCTTCGTGTTACGGGGTC TTCGTATTGGGTCCT 100 50
NtRootA1_27070 NONE
NtRootA1_27080 NONE
NtRootA1_27090 3014201 .. 3014226 +  -3.9  -4.18197   CATCGGGGAGGTCGG         GCTCGTCCAGG TACT TCTGGATGGTC          TTTTCCGTCACCGAT  63 256
NtRootA1_27130 3019607 .. 3019651 + -22.2    -3.737   TGGTAGAGGTACTAC AACGAATGGCCGGCCCCTGG ATAAC CCGGGGTCCGGCCATTCGTC TTTGGTCCCGCCTTG 100 35
NtRootA1_27190 3026910 .. 3026926 +  -7.9  -3.53091   CGCACCTCCGGTATC              CACGCCC GGC GGGCCTG              TTTCGCCGCGGCAGT  60 398
NtRootA1_27230 3030615 .. 3030640 + -14.7  -2.52623   AGATGTAACGGGGCG         TTGGTCCCGGG AGGA CCCGGGACCCA          GTATTCTGGGACAGC  78 83
NtRootA1_27240 3031520 .. 3031533 +  -2.3  -4.09739   AAGGTTGTGGCGGCA               AGCCT GTTC AGGCG                TTTTCGACCAATTGC  57 440
NtRootA1_27270 3034971 .. 3034992 +  -8.7  -4.04752   GGCTGGAGCTGACCA           GCGCG-TCCA CAC TGGGCCGCGC           TTTCTGCTATCCTTT  75 29
        rpsT 3035428 .. 3035451 + -19.6  -4.27316   CTGAGCTGATCAAAA          GGCCGGCACC CATG GGTGCCGGCC           TTTTGGGTTAACCGA 100 57
NtRootA1_27300 3037475 .. 3037487 +  -2.6  -2.89837   CTTGTATCAGGACGT                GCGT AATAA GCGC                TACTTCCTTTGCAGT  40 59
NtRootA1_27380 NONE
NtRootA1_27390 NONE
NtRootA1_27400 NONE
NtRootA1_27410 3052411 .. 3052442 + -10.8  -3.14881   CACCACTGGAGAACA      GCTGAAGTGGCGCCG GAC CGGCGCTGCG-CAGC      TTCGTAGCGGACTTC  67 238
NtRootA1_27550 3068770 .. 3068798 + -20.4  -3.56568   CTAGCAGAAAGAGAA        GGACCCGCATCC TGCGT GGATGCGGGTCC        TTTCAAGCCTGATTG 100 37
NtRootA1_27610 3072524 .. 3072539 +    -4  -3.79251   CGAATAATTTTGCCG              TTCTCA TCCT TGAGGA               TTTCGTCGTGCGCTG  56 323
NtRootA1_27710 NONE
NtRootA1_27750 3088363 .. 3088384 +  -5.1  -2.53263   TGAAGTAACCAGCCT           TTG-GCCCCG GTC CGGGGTGCAG           TACCTTAGCAGTCCC  43 33
NtRootA1_27760 3090148 .. 3090195 +   -20  -3.01712   TGAGCCCATGATTGT CTGCAGGCCCTGTACCGGTTAT CCAC ATGCCCGGTACAGGGCCTGTAC TGTTGCGGCCAGGAC 100 60
NtRootA1_27770 3090916 .. 3090926 +  -6.8  -3.53343   ATGGTGCAAATACTT                 TGGG TCA CCCA                 TTTCGAAGGCAAATT  57 112
NtRootA1_27870 NONE
NtRootA1_27880 3103359 .. 3103377 +  -3.8  -3.18681   TCCGAGCACGATGTC            GGCTCCG AGTGTA CGG-GCC             TTGGTCGCCTTCGCA  47 518
         dcp 3106264 .. 3106301 + -19.1  -2.82279   GCCTTAAAAACGGAA   CGACGGGCGCCGATCCG GAAG TGGATCAGCGCCCGCCG    TCGTATGTTTGGTAA 100 34
NtRootA1_27980 NONE
NtRootA1_27990 3117331 .. 3117351 +  -3.9  -4.86621   CACCATCCGCAGGAT            GCACGTAGT ACG GCTGCTTGC            TTTTTCCTTCGCCCT  77 421
NtRootA1_28010 3118319 .. 3118330 +  -7.2  -3.12668   CAGCACACGGTCAAC                GCCG TCGT CGGC                 TTCGCTGTGCACATC  56 238
NtRootA1_28060 3123922 .. 3123938 +  -7.9  -2.82208   CCCGACGACGCCGCT              CCCCTCC GGG GGACGGG              TCTGGTCCGTGATTT  52 260
NtRootA1_28100 3127068 .. 3127078 +  -4.6  -2.73364   GCTTAACGTGCGTTG                 CGTC CAG GGCG                 TCCTTCAACTGCGGC  44 168
NtRootA1_28120 3129792 .. 3129807 +  -4.7  -3.39895   TCCGAAGCCACGGCG              GCGTT GAGGAG AACGC               TTAGTTCGTCAACAG  53 488
NtRootA1_28180 3135738 .. 3135750 +  -9.1  -3.20901   AATTGCTGGAACCGG                CCCCA TGT TGGGG                TTAGATTGATCACAT  63 50
NtRootA1_28190 3136356 .. 3136398 + -12.7  -3.29144   GCGGAGGGCCATGGT GCTTACGCGGCCAGCCGGCCG GGA TGGCC-GC-GGCAGCGCAAGC TTGTCCAGCACGTCC  74 111
NtRootA1_28270 3143470 .. 3143484 +  -3.5  -3.31144   TCATCATCCAGATGG               CCATG GGCAG CGTGG               TTGTAGCCATGAAGA  46 402
NtRootA1_28330 3149406 .. 3149429 + -18.2  -4.37886   GACCAGAAAGCAAAA          GACCCCGCTC ACCT GAGCGGGGTC           TTTTATCCGAAGTGG 100 76
        mmfR 3150981 .. 3151008 +  -2.1  -3.48276   TCAGTTCTTCCTCGA       TGCCA--TCAACG ATTG CGTTGACCTGGCG        TTCTGTGGGCGCAGA  47 510
NtRootA1_28480 3164941 .. 3164981 + -24.4  -3.51924   AACTCCGCGAGATAA  CAGTTAAGGCCAATGTTC TTTGC GAACATTGGCCTTAACTG  TTATCTCGGTGAGGC 100 44
NtRootA1_28530 3172043 .. 3172076 +  -9.5  -2.79831   TTGCGGATGAGCTTG     TGGTTGGCTGCCTGG GCCA CCGGGCGGACAACGA      TCTGGTCCAGGTTGA  61 65
        valS 3175767 .. 3175807 + -23.6  -4.73388   GGAGACCATGCACAA GGCCTCCGGCAGAACTACA ATCC TGTAGTTCTGC-GGAGGCC  TTTTTCGTGCAGCTT 100 300
NtRootA1_28560 3176770 .. 3176789 +  -3.6  -3.65351   AGGTTGAACCGCGAA            GCTCT-AGT TAA ACTCAGGGC            TTTCCGTGCGGCTGC  54 60
NtRootA1_t00370 3182293 .. 3182314 + -14.5  -4.56133   CCCTCCAGTAAAAAA           GCCCCAATC TTCG GATTGGGGC            TTTTCGTTGTTAGGA 100 33
NtRootA1_28620 3183733 .. 3183756 +   -11  -3.29144   ACCAACGTCCCGCAA          GCGCGGCAGGG CTG CCCT-TCGCGC          TTATAGACAAAGTGG  69 162
NtRootA1_28660 3188828 .. 3188838 +  -2.4  -2.53015   GGACGTGGACGTGGA                 CGCC TAA GCCG                 TACGTTGGGGCCTGT  38 19
NtRootA1_28670 3189534 .. 3189546 +  -4.7  -3.45366   GCAATGTCATACCGA                GCGCC TTC GCCGC                TTGATTGCTTCGCGA  53 191
NtRootA1_28690 NONE
NtRootA1_28700 3191833 .. 3191844 +  -7.2  -3.01712   CTCGTCCCCACACGG                CGGC CCGG GCCG                 TATTCACAACGGCAG  54 244
NtRootA1_28720 3193289 .. 3193318 + -23.7  -4.45083   AGAATTCCCTAGCAA       TGAGGCCGGTCCC TGTT GGGACCGGCCTCA        TTTTGTGCCTGTGGC 100 29
NtRootA1_28740 3195316 .. 3195332 +  -2.2  -3.66178   ACCAGGGCTGCGCGA              ACGGAT TCCGT ATCCGG              TTTGGGGTTGGCCGC  51 42
NtRootA1_28750 3196158 .. 3196186 + -20.4  -3.83026   TAGTTAAAGAATCAA        TCCCCCGGAACC CTGCA GGTTCCGGGGGA        TTTCCTGTGCCCCAG 100 58
NtRootA1_28760 3197096 .. 3197108 +  -3.3   -2.5655   CCAGCCCCGCAGTAG                CCCCA CAG TGGAG                ATTACTCTGGGTCCA  40 77
NtRootA1_28770 3197981 .. 3197991 +  -2.4  -3.66883   GAATCGCCAAGGCGG                 CGGC CAG GCAG                 TTTCCCATCTCTTCA  51 284
NtRootA1_28790 3198586 .. 3198601 +  -4.6  -3.16742   GCAATCCTCAGATGA              TCGGGC GCAG GCCTGG               TTCGTCGCGCTTGCG  47 95
         orn NONE
NtRootA1_t00390 3201157 .. 3201190 + -26.9  -5.07652   AGAAGCCGGTTTCCA     CAAAGGCCGCACCGG TTAT CCGGTGCGGCCTTTG      TTTTGTTTTGGCCCG 100 55
         def 3201785 .. 3201795 +  -3.2  -4.18018   TCGACCCCGATCCTT                 TCGG ACA CTGA                 TTTTCGATGACCCAA  60 15
NtRootA1_28830 3202685 .. 3202704 +  -8.6  -3.31461   CCGGACAGGAAGAGA            GGACGCGCA TCA TG-GCGTCC            TTCTCCGCCTGGGTG  60 54
NtRootA1_28870 3206975 .. 3207005 +  -4.7  -3.41602   ACCGTGAAAGAGCCT      GGCGG-CGCCGACGC CGC GC-TTGGCGATCGTC      TTCTCATAGACTGCA  53 171
        msrA 3209198 .. 3209224 +  -2.1  -3.65351   AGCGCGGAAATATTA         CTCTGCATGGC TAACT GCTTAGCAGGG         TTTCGATGCGGCTGG  51 4
NtRootA1_28910 NONE
NtRootA1_28920 3210933 .. 3210975 + -18.4  -4.19238   TCCGTAAGGCCAGGA CGCTCCAGGCTCCCCTACCC ACC GGGTAGCGGGTCTTGGGGCG TTTTGCCGTTGACGC 100 111
NtRootA1_28950 3214594 .. 3214608 +  -2.8  -3.43492   GCACCCACGGCGCGT               GCTATT TCC AGTGGC               TTGTCATGCATATCG  49 422
NtRootA1_28990 3218129 .. 3218155 + -23.8  -5.24129   AGTCCTGATGCAAAA         GGCTCCGACCCC AAA GGGGTCGGAGCC         TTTTTTGTGCCAAAG 100 50
NtRootA1_29060 3226403 .. 3226446 + -18.8  -2.83522   CAACTCAAGCAGTAA CCGCGACGGCGGCTTCCAGC GGAA GGTGGGAGCCGCCGTCGGGC GTTTAATAAAGGCCT 100 84
NtRootA1_29070 NONE
NtRootA1_29080 NONE
NtRootA1_29090 3229929 .. 3229940 +  -3.6   -3.5936   CTTAACAAACCCAAA                CCGT AACC GCGG                 TTTGCCCCCTTTCCG  51 81
        acpP NONE
NtRootA1_29110 3231650 .. 3231685 +   -22  -3.26649   ACCCTAGGTAAGTAG    AAGAGAAGGGCCCACC AGCA GGTGGGCCCTTCTCTG     TTGCTATGGGAATGT 100 73
NtRootA1_29130 3233637 .. 3233655 +  -6.6  -3.28924   AGACAAACCGTCATG             GGGTGCGG CCG CCGAATCC             TTGTCAGAGACAGTC  55 310
NtRootA1_29160 3235743 .. 3235771 +  -7.3  -3.14132   CGTCGGAGGCGCTCT        GGTCGTAGGTGTC GGA GAGGCCTGCGCCC        TTGGTCCCGAGGACC  56 330
NtRootA1_29180 NONE
NtRootA1_29190 3238291 .. 3238313 +  -5.4  -3.54424   AATATGCAAAGTCAG           GCCTGCAGGG GTT CGTCGCAGGC           TTTGCAGGCGTGACG  55 440
NtRootA1_29230 3240817 .. 3240836 +    -5  -3.14132   GATCATGGATGGCTC            CGTCGA AGATGATG TCGACG             TTGATGCCGGCGACA  48 230
NtRootA1_29310 3255186 .. 3255208 +  -2.7  -3.34895   TGATCTTCTTCTTGC          CTGATCGCTC GGTC GAGCAA-CAG           TTCGTTGGGGATACC  46 67
NtRootA1_29320 3256262 .. 3256276 +  -8.5  -2.91274   CGAGCGCGCGAAGTG               CGGCC GAGAA GGCCG               TCTCCTTGGCCTCGC  55 114
NtRootA1_29350 3259881 .. 3259919 +    -3  -3.75153   TTCGACCGGAACGCG   GGCGTCGATGCTTTCC AGGAGGC GGAAGTCGACGACACC   TTTGAGTTGCGCGCC  54 87
NtRootA1_29370 3261163 .. 3261215 + -27.2  -3.55444   ACACAAAGCGTCGAC GGACCGCACCGGGTCGGTTGAGGTC ACCA GGCCTCAACCGGCCCGGTGCG-TCG TTTCCGGGGTCGGAC 100 71
NtRootA1_29380 NONE
NtRootA1_29390 3264954 .. 3264986 + -27.1  -3.92075   TAGCCGGCGGAAGCA      GGGCCGGTGTCCGGA CGA TCCGGGCACCGGCCC      TTTCTGCGTCCCGAT 100 38
NtRootA1_29400 NONE
NtRootA1_29410 NONE
NtRootA1_29420 NONE
NtRootA1_29430 NONE
NtRootA1_29440 NONE
NtRootA1_29450 3270016 .. 3270044 + -19.6    -3.551   AGCAGTCAGGACGGG        CCCCGGTCGCTG GAGGA CAGCGGCCGGGG        TTCTGTGCATTCACA 100 56
NtRootA1_29460 NONE
NtRootA1_29470 3273089 .. 3273116 + -22.8  -3.59979   CAGAACTCATTGAAA        GGCCCCCGGAGA GACC TCTCCGGGGGCC         TTTCGCATAGAGAGG 100 59
NtRootA1_29480 NONE
NtRootA1_29490 NONE
NtRootA1_29500 3276142 .. 3276152 +  -8.2  -2.62184   CGTGCATCGAGGTGA                 GCGC CGT GCGC                 TGATCTGCGCCAGCG  53 12
NtRootA1_29510 3278366 .. 3278407 + -15.8  -3.03124   CTCGGAGATCGACGA GTCTGACGGCGCATGGGG CTCGCA CCCCGTGCGCCGTCGGCG  TCTTCCGGGATCACA  88 46
NtRootA1_29520 3282586 .. 3282627 + -16.1  -3.72347   CGGGTCTATTCGCTC CG--TGCCGGGACAGTCGA TGCAAT TCGACTGTCCCGGCATTCG TCTTTTGGCTCGTTT 100 47
NtRootA1_29530 NONE
NtRootA1_29540 NONE
NtRootA1_29550 3290451 .. 3290500 +  -6.5  -3.08032   GAGCTTTAGTTGAAT GAATA-CCGACAGGTCTGTGGA TCGCTTT TCGACAGGCCTGTCGGATAAAC TGGTTTTCAAGCAGG  52 32
NtRootA1_29560 3290960 .. 3290987 +   -17   -3.8969   AGAAAAAAATAAAAA        CCCCGGCGATGC GGAA GCATCACCGGGG         TTCTTCTGTCAGTAA 100 60
NtRootA1_29580 3292154 .. 3292168 +  -4.2  -4.20354   CGCAATCTTGATGGC               CGCC TTTTGCC GGCG               TTTTGCCGTTGCATT  62 54
      ligC_1 NONE
NtRootA1_29610 3294903 .. 3294924 +  -2.9  -3.36569   GGCCCGCTTCGGGTC           CTCGATCAC CCAT GTGATCCCG            TCTTTGACGGGTTCG  46 437
NtRootA1_29640 3295463 .. 3295473 +  -2.4  -3.41051   CGCGTGAGACGATGC                 GCAG CGG CGGC                 TTCTCATGGGGGTCC  46 124
NtRootA1_29800 3311394 .. 3311434 + -24.1  -3.32022   CGTGAGAGCAGGCCT  GGGGCCCGGACAACGCTGA CCT TCAGCGCTGTTCGGGCCTC  TTGCTGTGTCCGGAA 100 36
NtRootA1_29880 3316676 .. 3316695 +  -2.1  -2.56596   CAGGCGGTATTTGAT            CATGCAG GTCCAG CTGGATG             TAGGTTCCTGGGGCC  38 27
NtRootA1_29890 3318184 .. 3318200 +  -7.9  -4.42238   GGGCGAGTCTGGACG              CTGCGTG CTC CACGCTG              TTTTCGTTGAGGTCC  81 447
NtRootA1_30190 3342801 .. 3342834 + -25.5  -2.62735   ATTCGAATCAAGGAT     CAACAGCCCTGCAGC ACCA GCTGCAGGGCTGTTG      TCATGTCCGGGGTGT 100 93
NtRootA1_30230 NONE
NtRootA1_30240 NONE
NtRootA1_30250 NONE
NtRootA1_30260 3348732 .. 3348783 +   -29  -2.88663   ACCCGGGTCCGCGTG GGCGAAGAGCCGTTCCTGATCATC GAAA GAGGATCAGGAACGGCTCTTCGCA TCTCTCGGCATCAAT 100 40
NtRootA1_30270 NONE
NtRootA1_30280 3350745 .. 3350787 + -16.3  -2.67694   TGACCAGAGAAAAAA GAGACCCCGCCG-CCGGAGC TGAT GCTCCTGACAGTGGGGTCTC TGCTGTAGTGCTGGT  84 71
NtRootA1_30350 3353787 .. 3353824 + -23.5  -3.61398   GGACACAAAAAAAGA   GACCCCACCGCCGGAGC ACGC GCTCTGACGGTGGGGTC    TTCTTCAGGCGAACG 100 46
NtRootA1_30410 3356597 .. 3356631 +  -5.5  -3.28712   CGCTGAGCTAGAGCG     CCGTGGGCCGGTTCC GGGAA GGAGCCGGCGAGGGG     TTGTGACGAAAGGGA  51 84
NtRootA1_30520 3362517 .. 3362530 +  -5.2  -4.18762   CTTCGATGGCGACGT               CGGC ACTAGA GCCG                TTTTGGCTGCGCATT  66 98
NtRootA1_30550 NONE
NtRootA1_30560 3365655 .. 3365686 +   -26  -5.83211   CTGCCTGACAGCGAA      GAACCCCACCCGGC TACA GCCGGGTGGGGTTC       TTTTTTGTTTTGATG 100 56
NtRootA1_30580 NONE
NtRootA1_30590 NONE
NtRootA1_30600 3369213 .. 3369242 + -17.9   -3.9941   CTGTAGTCGAACCCA       TCAGCCCGGTGCC ATCA GGCAACGGGCTGA        TTTCATTCTAGAGGC 100 113
NtRootA1_30620 3372511 .. 3372563 + -27.2  -3.18912   TACATCAGCACGCCA TGGCATCGCCCAACGGCATCGGAT CGCAT GTCCGAGTCCGTTGGGCGATGCCA TTCGTGCGTCAATCA 100 104
NtRootA1_30630 NONE
NtRootA1_30640 NONE
NtRootA1_30650 3379564 .. 3379596 +   -22  -3.64703   GATCGTTGGTGATGA      GGGCGGCGCACTCC GACAA GGCGTGCGCCGCCC      TTTGCCTGCCACGGG 100 39
NtRootA1_30660 3380174 .. 3380210 + -18.1  -3.59979   AGCCAGTCAGACACA    AGAAGACCCCGTGGACG TGA TGTCCATGGGGTCTTCC    TTTCCCGTCGGGCGG 100 59
NtRootA1_30690 NONE
NtRootA1_30700 3382674 .. 3382704 +  -3.9  -2.64794   AGCCCGCTCCATCTC       GTCGACTCATCCC CGAGT GTGACGATTCGAC       TCGTATCAGATTCCA  42 40
NtRootA1_30710 3383171 .. 3383202 +  -6.4  -3.65314   TAGTTCTTGTGGTGG      CGCAGGTTGTTCCG GTAG CGGAACGTCCGGGG       TTCTTCGCACTTGGG  59 169
NtRootA1_30740 3389786 .. 3389801 + -10.4  -2.75074   GTGGCTTCTGCTTCC              GCGACC GTGA GGTCGC               TCATCTTCACGTCGG  60 498
       ung_2 3392110 .. 3392123 +  -5.3  -3.35992   GGCGAGGTTGAATGC               CAAGA ACCC TCTTG                TTGGTTCGAGTGCGT  53 40
NtRootA1_30780 NONE
NtRootA1_30790 NONE
NtRootA1_30800 3396188 .. 3396209 +  -4.3  -3.15228   GATCGAACCGCCTAC           CTTGCTCGC AGTG GGGTGCAAG            TGGTTTGTCTTTCCG  45 107
NtRootA1_30810 3396930 .. 3396944 +  -2.7  -2.87132   CGCCCCCTGCCGATC               GGGGC CGCAT GCCGC               TGTGTGCGAAGGCGG  40 96
NtRootA1_30820 NONE
NtRootA1_30830 3397883 .. 3397899 +  -6.5  -3.62275   GTCTCTGAGTGCCGT              CCTGCCG GGG TGGTAGG              TTTCCACTGCTGCAT  59 212
NtRootA1_30910 3407554 .. 3407564 +  -6.8  -3.59262   CCCATATCCCGGGCT                 GTCG GGT CGAC                 TTTGAAGCTCTCCCA  60 382
NtRootA1_30940 3410874 .. 3410904 +  -3.1  -4.11216   ATCGACTTCCGATCA      CG-GTCCGGCGACG AGGC CGGAGCCGGAGGCG       TTTTCGAAATGAGCC  60 200
NtRootA1_30960 3413738 .. 3413761 +  -3.8  -3.70037   TATGCGCATTCGCGA          GGATCGAACT GTTG AGGTCGATCG           TTTCGCTCGTCGTTA  56 401
NtRootA1_31010 3417422 .. 3417440 +  -8.1  -3.35798   GCTGGGCCACAGAGC             CCCGTCG GCTGG CGATGGG             TTATACGTCGGCGGT  61 286
NtRootA1_31040 NONE
NtRootA1_31050 NONE
NtRootA1_31060 3422888 .. 3422899 +  -2.2  -2.78463   AAGGCACCGCACTCC                TGCT GGAA GGCA                 TCTGATGACAGAAGT  39 9
NtRootA1_31070 NONE
NtRootA1_31080 3424592 .. 3424637 + -32.1  -3.67976   TGACCCAAGCCAAAA CAGGTGAAGCTGGCCGGGACC GTGA GGTCCTGGCCAGCTTCGCCTG TTTCGACTTAGTCCG 100 38
NtRootA1_31090 NONE
NtRootA1_31100 3425684 .. 3425698 + -11.4  -4.27316   GAAATGTTGACGATG               GTCGGC GCC GCCGAC               TTTTGCATTGCCGGG  89 483
NtRootA1_31150 NONE
NtRootA1_31160 3433418 .. 3433456 + -30.6  -3.34043   CCACCTCCTCCACAA   TGAACAAGACCCCCGACG CTG CGTCGGGGGTCTTGTTCA   TTGTGGAGTCCTGCG 100 54
NtRootA1_31200 3437277 .. 3437297 +  -2.5  -3.69364   GATCCCGAGACCTGA            GATGAAGAG CCC CTTTTCGGC            TTGTATCTCTTAAGT  51 336
NtRootA1_31220 3437654 .. 3437670 +  -3.7  -3.54741   GCTGTTCCGCCGCAA              GGAAC TGTAGAT GTTCC              TTTGCAGGAGTGATC  51 16
NtRootA1_31230 3438528 .. 3438538 +  -8.2  -2.70946   GATCCGCACGTCGGG                 CGCG TTC CGCG                 ATATTTGTCGAGCCG  54 438
NtRootA1_31260 NONE
NtRootA1_31270 NONE
NtRootA1_31280 NONE
NtRootA1_31290 NONE
NtRootA1_31300 NONE
      nhaA_2 3444403 .. 3444457 +  -3.6  -2.52896   CAGCAGCTTGGCGGG TTCGGGCAGGCGCTGCTT-CCG-CGCA CATG TTTGACGGTAAGCCCCGCC-GCTCGAA TGCCTTCACGCATAC  41 413
        thiC 3456022 .. 3456059 + -25.7  -2.79183   CACTGAATCCTGGGG   CCGGTGCCCTCCAGCTGC TAC GCGGC-GGAGGGCACCGG   TGTCCTCCAGGTACC 100 92
       zwf_2 3459962 .. 3460002 + -29.3    -4.183   GAAACCGTCCAGACA  TGAAGCGGGCCGGATACCT GAG AGGTATCCGGCCCGCTTTA  TTTATTAGGACTTAG 100 70
NtRootA1_31520 3463128 .. 3463177 + -15.3  -2.53213   TAAAAGCAAAAGTGA CTGGCAATAGTGGTTGGT-TAGAG CGC TTCGAAAACAACCACTATTGCCAG TCAGTTGGGCGATTG  81 16
NtRootA1_31550 3473133 .. 3473175 + -17.8  -3.59979   GGTCCGCCTCCGAAC TGCTGGCGTCCGGCCC CCTGAACTCCA GGGCCGGACGTCGGCA TTTAACGTCAGCAAA  95 40
NtRootA1_31650 3481268 .. 3481278 +  -2.4  -3.72576   GACTCCGGCCGCCAT                 CACG CCA CGCG                 TTTCCTGCGAACCAC  51 49
NtRootA1_31660 3482040 .. 3482071 +  -3.7  -3.78934   TTTCAGACTAGGAGG      GTTCAGCGA-ACCA TAGTT TGGTCTCGCCGTAC      TTCTTGTCAGCGAAA  54 30
NtRootA1_31710 3487738 .. 3487778 + -18.3  -3.55622   ACTCAACCGCATACA  CAGCAGCTGGTGCCGGTCG TTC CAACCGACACCAGCTGCTA  TTTGCCAGGGTTCAG 100 46
NtRootA1_31780 NONE
NtRootA1_31790 3495952 .. 3495963 +  -3.6  -4.35581   GCTGCTCAGCTACGC                CTGC TATC GCGG                 TTTTCAGTCTTTTGG  64 127
NtRootA1_31880 NONE
NtRootA1_31890 NONE
NtRootA1_31900 NONE
NtRootA1_31910 3511918 .. 3511962 + -20.9  -3.71649   GGGCCATATGAGAAA TGCTCTCTCACTTCCTTCCCT TGA ACGGGAGGATGTGAGAGAGCA TTTCAGCTTTGGGGC 100 58
NtRootA1_32000 NONE
NtRootA1_32010 3527505 .. 3527525 +  -5.3  -2.85574   TCGTTGCGGAGATCG            CCGAGGG AACAAAG CCCCCGG            GTTTGGTCGAATTCA  47 101
NtRootA1_t00430 3527629 .. 3527657 + -21.9  -5.32565   GGTGCACCAAGGGAA        GGCCTTGGAGTGA TAT TCACTCCAAGGCC        TTTTTTCATTACTTC 100 32
NtRootA1_t00440 3527894 .. 3527939 + -19.9  -3.29109   CGGGGGGTGCACAGA ATAGTAAAGGCTCCGGATCGT TGCT ACGCTCCGGAGCCTTTACTGC TTCCTGTGGACTTTT 100 28
NtRootA1_32030 NONE
NtRootA1_t00450 3529210 .. 3529249 + -16.6  -4.00042   CCTTGCGCACACAGT  TACCCCCGGTTCGA-TGAG CAT TTCATTCGGACCGGGGGTG  TTCTTTCCTCAAGCA 100 31
NtRootA1_32050 3532404 .. 3532417 +  -3.7  -2.53012   TGTGACAGCCAGTGC               CGCCG CTAA CGGAG                ATTGATCGTGACCTT  41 84
         mqo NONE
NtRootA1_32070 3537227 .. 3537259 +  -7.5  -3.02144   AGCCGCATCAGCAGC      CAACGGGGCCGGGAA CAA TTCGCGGCCCCGCCC      TGTTACAGGCAGTGA  54 41
NtRootA1_32080 3538459 .. 3538470 +  -3.6  -2.62515   CCAGCTGGAGCCCAG                GGTC AGGA GGCC                 TGATGTCCAGACCTT  42 11
NtRootA1_32090 3539305 .. 3539336 + -20.2  -2.52464   AGTCACGGCATACAC      CGCGGCGGTGGAGA AGCG TCTCCACCGCCCCG       TCGGTTCCCCGCGAG  90 381
NtRootA1_32120 NONE
NtRootA1_32130 NONE
NtRootA1_32140 3542261 .. 3542271 +  -5.4  -4.19238   TGCAGGACGTAGGAT                 GTCA TCA TGAC                 TTTTCCCCTTCCCCG  66 109
NtRootA1_32150 NONE
NtRootA1_32160 3543728 .. 3543738 +  -2.4  -3.65425   TGAGGCGAAGCTGAA                 CCGC ACG GCTG                 TTTGCGCTATCTCCG  49 134
NtRootA1_32200 3547545 .. 3547560 +  -4.6  -4.22338   GGCTTGGCCGCCAGC              ATGCGC TCCA GCGCAA               TTTTGGCGTTGTCCT  64 171
      gabP_1 3551715 .. 3551748 + -21.2   -3.7108   GCTCATTGAAACCAA     GAGGCCCTGTGCAA TTTGTT TTGCACAGGGCCTC      TTTGCGTATCCAAAT 100 47
        bkdA NONE
NtRootA1_32260 NONE
NtRootA1_32270 NONE
NtRootA1_32280 3555536 .. 3555555 + -12.2  -2.71144   TGATCCAATATCCAA            TGGGCTTG TTCA CAAGCCCA             TGCTTCCAGCGGATG  66 445
NtRootA1_32300 3556406 .. 3556424 +  -8.1  -3.90112   TGATGAACACTGAAG             CCGAGGG GACGG CCCTTGG             TTTCCTTGGCAAGAA  68 130
        gylR 3558804 .. 3558828 + -17.3  -3.79113   AAGCCAATACTCGAA          GAAGGACAGGA ATC TCCTGTCCTTC          TTGTTCTCGAGCACT 100 116
NtRootA1_32330 3559674 .. 3559732 + -38.5  -3.76373   CTGGATATACAGCCG CAGC-GGAAAGGAGAGGAAGCCCCCGGC AGTT GCCGGGGGCTTCCTCTCCTTTCCTGCGG TTTCGGTGTTCGAAG 100 49
NtRootA1_32350 NONE
NtRootA1_32430 3570506 .. 3570520 +  -2.7  -3.09516   CGGAGTAAAGGAGCC               CGGCG ATTTC CGCGG               TTGCGTACTGGGCAG  41 459
NtRootA1_32500 3578951 .. 3578963 +  -2.6  -3.99324   AGGACGGTGGTGCGT                GCGG TCACC CTGC                TTTCTGGTCGTGCAC  57 213
NtRootA1_32520 3580747 .. 3580790 + -34.2  -2.87132   CGCACTCAAATGCCA TACAGGAGAAGGCACCCCGC AAAG GCGGGGTGCCTTCTCCTGTA TGTCTCAAGCCGGGC 100 48
NtRootA1_32590 NONE
NtRootA1_32600 3587709 .. 3587734 +  -5.3  -3.66288   CGTCCGAAGCCTTGT         CCTCGCGGTTG GCCT CGGCCATGAGG          TTCTCTTCAGGGCTG  55 493
NtRootA1_32690 3598312 .. 3598351 +  -3.4  -3.72576   CACTCACGTGGCAGA  CCGTCCACGCCGGCAC-CT GCC GGAGTGACGTCGTCGACGA  TTTCGTCCAGGACAC  54 83
        nucS NONE
NtRootA1_32730 3601713 .. 3601735 +  -6.2  -2.76468   TCGCGGAGTAACAAG           GGCCGGTACG AGG TGTATCGGAC           TGCTGTTCCATAATG  49 256
        cspA 3602004 .. 3602039 +   -22  -3.57263   TGCAGTTTCAACAAA    CGCGTTGGTCCCGGCT TTCC AGTCGGGACCAACGTG     TTTAACAGTCAGAAT 100 64
NtRootA1_33000 NONE
NtRootA1_33010 NONE
NtRootA1_33020 NONE
NtRootA1_t00460 3632978 .. 3633008 + -24.2  -3.75153   ATCGAGGGCACACAC       GATACCCCGCCAGT CCA ACTGGCGGGGTATC       TTTGCATTCCAGCCC 100 29
NtRootA1_33030 3634200 .. 3634240 + -20.3  -3.17075   GTCAAGGTTTAGACC  AGCCGGCGGGACCGTCCGG CCC CCGGGCAGTCCCGCCGTCG  TTGGCTTGCCGCCAG 100 29
NtRootA1_33040 3635049 .. 3635088 +  -8.6  -3.11812   ACAAGATGGAGGCAT  GCATCGATACCGGCAGCAG TTC CTGC-GCTGGTAATGATGG  TTCCGTCCTGTACAT  58 491
NtRootA1_33060 3635847 .. 3635896 + -20.9  -2.87881   AAGATTTGTCCACCC GACGCCCGTCCTTCACGGAATTC ACCA GGATTTCCTGAACGACGGGCGTC TCTGTGCGCGGCTTG 100 72
        hrpA 3640422 .. 3640434 +  -6.2  -3.28637   CCACACGAAACGGCC                CGGG ATTTC CCCG                TTGATGATCTTGGTG  52 416
NtRootA1_33100 3641721 .. 3641762 +    -8  -2.91735   ATCCGACGCTACTCC CGGC-AGCAGCGCTCGTGCCA CTT TGGC-CGTGCGC-GCTAGCAG TGTCTCCGGTGTTCC  56 192
        cysK 3643818 .. 3643850 +  -2.6  -3.05384   CCGGTTAAACCTCTA     CTGACT-CACGGGGC GCCA GTCGCGTGTAGGCGG      TTCCGTAACGGGCAC  41 33
NtRootA1_33150 3645275 .. 3645288 +  -3.7  -2.78384   GTGGTAACCCGCAGC               GCGGC AGCG GCCGG                TGTGATGAGCAGCGC  42 254
         kgd 3654774 .. 3654816 +   -25  -3.86252   CAAGTAGCCAAGAAA CTGCCCGGCTGGAGGTGC TGTCAAT GCACTTCCGGCCGGGCAG TTCTGTTTAATGGGA 100 34
NtRootA1_33220 3655538 .. 3655577 + -13.1  -3.54741   TTGCGTTCCCCCTAT  TCGCGATATATCGTGTT TTCATC AACGCGATATATCGCAA   TTTGGAGGGATCATG  81 57
NtRootA1_33230 3656423 .. 3656445 +  -4.1  -3.91506   CCACCCGGTGCCTGG           GGAGGCG GGTCTCTGA TGCCTCC           TGTTTTTGCGCATGG  57 10
NtRootA1_33240 3657245 .. 3657288 +   -21   -3.5936   AGCGTCAAGGCTTAA CAGCAAGGGCCCCGGAAACC ATTC GGTTTCCGGGGCCCCTGGCG TTTGGGCGCTTTACC 100 218
NtRootA1_33270 NONE
       aroA1 NONE
        rsgA NONE
NtRootA1_33300 3662535 .. 3662570 + -20.5  -4.63218   TTGCACAGAATTTTC    GACGGCGGGTGCCTC CTTTTC GGGGCATCCGCCGTC     TTTTCTTCGCCCAAA 100 69
NtRootA1_33310 3664255 .. 3664270 +  -4.6  -2.57274   TTTGGTCAGCGGTGC              CTTGGC CCAG GCCGGG               ATCTTCATTGTCGCC  43 53
NtRootA1_33320 NONE
NtRootA1_33330 3666007 .. 3666020 +  -5.9  -3.05715   TCCGGGGCGCTGTCA               GCGGT AACT GCCGC                TTCGGTAAGCGGGTT  49 130
NtRootA1_33350 3668047 .. 3668073 +  -3.6  -3.86897   CGCAGGCGAGCCGGC         GATGACCTCC ACCACAC GGAGGCCCTC         TTTCTGGCCAGTCCG  56 251
NtRootA1_33480 3682474 .. 3682508 + -21.6  -2.60244   GCAGTCCAGTTTCGA     GGGCCCTTTCGTGGAA ATC TTCCATGAAGGGGCCC     TCCCTTGATTCCCGG 100 48
NtRootA1_33490 3684066 .. 3684091 + -18.3  -3.74077   GATGGACTGTGTGAA         GGCGCGGATCC AAGA GGGTCCGCGCC          TTTCCGTGTCTGCCC 100 44
NtRootA1_33520 3685771 .. 3685787 +  -4.4  -3.69338   GGATCCCTCGGTGGA             CAC-GCG CAAT CGCAGTG              TTCTTCAGCTTGGTT  56 145
NtRootA1_33530 3689245 .. 3689279 + -24.4  -4.44667   CGGCAGGAAAGAGAA     GGGAAGGTCAGGACGC CAG GCGTCCTGACCCTCCC     TTTCTTGTTGCGGGA 100 58
NtRootA1_33640 3705411 .. 3705421 +  -5.4  -2.93853   GGACCGTTGTTTCCA                 TCTG ATC CAGA                 GTTTGGTTGGGCCGG  48 485
        whiB 3705986 .. 3706025 + -33.8  -3.65902   AGTACAAGCACCAAA  CGCAGAAGGCCGCGGACC ACAT GGTCCGCGGCCTTCTGCG   TTTAAGTCAGCTGCC 100 66
NtRootA1_33710 3715082 .. 3715094 +  -2.6  -4.38154   TTAGCGAACTTTGGA                CCTG GGAGG CGGG                TTTTCTAGCCAATCT  62 310
NtRootA1_33730 3716561 .. 3716588 +  -7.7  -2.59564   CGCCAAAGAGCCAAT        CGTCCCGCACCG AATGC CGGTGCCG-ACG        CTTCTACCCTGGACG  53 249
NtRootA1_33740 3717001 .. 3717024 +    -8  -3.48593   AGATCTACGAAAAAA          GACCCCAGAC TTGT GTCCGGGGCC           TTCTCTCACAGGGTG  62 91
NtRootA1_33780 3723049 .. 3723062 +  -2.3   -4.7373   AAAACATTCATGCTG               GTAGC CTTA GCCAC                TTTTTGGTCCGGTAA  70 132
NtRootA1_33820 NONE
NtRootA1_33830 3729751 .. 3729763 +  -3.3  -3.57106   CGCATTGTGGAGTTG                GTTCC GCA GGCAC                TTGGTTTGGATTGCG  49 102
NtRootA1_33840 NONE
      moxR_2 3731985 .. 3732003 +  -3.9  -3.26743   GCAATGGCAAGAGTG            CCC-TGAT GGCC ATCACGGG             TCGTTTTGTGTTGCT  47 64
NtRootA1_33860 NONE
NtRootA1_33870 3734279 .. 3734308 +  -7.2  -3.76413   CATGGCATCAGCATC       CGC-TGTGGGC ATCGCACCG GCCCACACGCG       TTTGCCCTTTTCCAC  65 285
NtRootA1_33900 3736314 .. 3736342 + -14.5  -3.10905   AATGGAGACACTAAA        GGCCCGCTCCCCA GCG TGGGAAACGGGCC        TTCGGTGCATTATCC  83 60
NtRootA1_33950 3743280 .. 3743294 +  -3.5  -3.53224   CATCCCCTGCCGCTC               CCGGT CCATT ACTGG               TTTGAGCGCGGCATA  49 197
NtRootA1_33980 3747513 .. 3747528 +  -4.6  -2.92463   CCGTTGGCCCTCGCC              GCGCCA CCGT TGCCGC               TGTCTGGATGCTGGA  46 58
NtRootA1_34010 3750226 .. 3750236 +  -5.4  -3.14132   CTGGAACCACGTAAC                 GGAA CAG TTCC                 TTCGTGGACGCGGCG  48 298
NtRootA1_34040 3752865 .. 3752887 +  -4.2  -3.03124   GGACGGGACTGGCTA          GGATG-GGA CGGTGT TCCGCATCC           TCTTCCACACTCCAG  45 116
NtRootA1_34050 3753378 .. 3753394 +    -8  -3.61268   CTGCGAATAACCTAT              GCAGGA TGAAT TCCTGC              TTTGGACATTCGATG  62 61
        sigK NONE
NtRootA1_34070 3754989 .. 3755028 +   -33  -3.68341   CCAACGCTTAAGGCC  CGACGGCGGCCGTCCCAC CAAG GTGGGGCGGCCGCCGTCG   TTCTTGCCTGCAGTT 100 59
NtRootA1_34140 NONE
NtRootA1_34150 3764898 .. 3764926 + -18.2  -4.06361   CTGAACCATGAAAAC        TGGCCGGATCCC TCTTC GGGGTCCGGCCA        TTTCGTTCTCTGTGC 100 73
NtRootA1_34190 3772416 .. 3772449 + -18.3   -2.6927   TCCACCTGATCTCAG     CAATGGTCGCCATGG ATTT TCATGGCGGCCATTG      TCGTCTCTAGCCCGT  95 32
NtRootA1_34230 3777957 .. 3777971 +  -5.6  -4.14739   CAAGCTGTTTGCCTG               CAGGCC GGC GACCTG               TTTTCCAGTCGATGA  67 268
NtRootA1_34270 3785907 .. 3785922 +  -3.2  -4.15044   GATCGGGGAGCTCAG              GGTCCT CTGT AGGAAC               TTTCTTCGGAAAAAA  60 156
NtRootA1_34280 NONE
NtRootA1_34290 NONE
NtRootA1_34300 3788588 .. 3788635 + -12.7    -3.794   CAGCCAAACAGCAGA CCCCGCCT-CCAGACCTTCGCC CTAGT GGTGAAAGTCAGGGATGCGGGG TTTCCTGCATTAAGC  87 52
NtRootA1_34320 3790354 .. 3790368 +  -5.6  -3.35679   GCCTGCACGCTGGAT               GGAGTG GTC CACGCC               TTCTGCATCAAGGGC  52 280
        hemA 3801979 .. 3801999 +  -2.5  -4.13945   GGCGGTCCAGCTCCA            CGGCGAA GAGCGAA TTCGCGG            TTTTGGCCTGCCCGT  59 450
NtRootA1_34450 3804602 .. 3804613 +  -3.6  -3.26471   ACTTAAAACTTGATT                GGCT TGGA GGCC                 TTGCTGTGGAAGTAA  47 59
NtRootA1_34460 NONE
NtRootA1_34470 3805213 .. 3805264 + -26.2  -4.06491   AACGACGCTGTTCAG TCTTAAATGGCTCTGGCCATCACC CGTG GGTGATGGCCAGAGCCATTTAACC TTTCTGTCCCGTTCA 100 57
        thiE 3808908 .. 3808928 +  -9.7   -2.7566   GAGGAGTGGTCCCAG            GTCGGGATG TTC CATGCCGAC            TCGTTGGGCTTGCGT  57 183
NtRootA1_34540 3811011 .. 3811023 +  -4.7  -3.57144   CAGCACCCGAACTGC                CGCCG ATC CGGGG                TTTACGGCTCCCAGA  53 48
NtRootA1_34550 NONE
NtRootA1_34560 NONE
NtRootA1_34590 3816917 .. 3816966 + -26.7  -3.80174   CCCGGGCAAACAACA GCACAAAGGGAAGGCCACCGGAT GGAT ATCCAGTGGCCTTCCCTTTGTAC TTCTTCTGAGGCTAT 100 66
NtRootA1_34610 3819128 .. 3819138 +  -4.6  -2.62184   TAAGGAAACTCGGAG                 GCCG CAT TGGC                 TGATATCAACGCCAC  43 12
NtRootA1_34620 NONE
NtRootA1_34630 3821112 .. 3821151 + -10.6  -3.09933   CTTCGTGTCCACCGC  TGCTGCCGCAGCAGTTGC GGCA GCAACTGGGGCGCCGGCG   TTGACTGGCTTCGAA  62 147
NtRootA1_34670 3823996 .. 3824022 + -15.9  -2.81208   CTGCTTAAACAAAAG        CAGGGCTCCGGC TCTC GCCGG-GCCCTG         GTCTTTTGAATCCAG  86 95
NtRootA1_34720 NONE
NtRootA1_34730 NONE
NtRootA1_34740 3829536 .. 3829548 +  -4.8  -3.59698   AAAGGTGGCGATTGC                CCGA TGACT TCGG                TTCTCTATGACGTAC  53 19
NtRootA1_34750 3830421 .. 3830477 + -29.9  -4.15854   CGGGAACATTCCTTA GT-CATAAAGAGAAGGTCCGCAGCCG TTCATT CGGCTGCGGACCTTCTCTTTATGCGC TTTTAGAGTGCCTTT 100 44
        dapD NONE
NtRootA1_34780 3833834 .. 3833846 +  -3.3  -3.15996   GGCTTCGCGCTCTGC                CTCGA TCT TCGCG                TATTCATCGATCCTG  44 261
        galE 3836069 .. 3836125 + -23.8  -3.53444   GCTTCCTAATAACAA CGCGGGGTCACTTAGGGCCCATATCG GCCTG CTTTATGGGCCGCAAGTGACCCCGCG TTGCTTATTACGGAC 100 32
NtRootA1_34850 3839943 .. 3839992 + -18.5  -2.91466   GCCACAGCAACAAAA AGAGCCGCCAGCACGGC-CGCGGC TAT GCCACGGGCCGTACTGGCGACTCC CTTGTTCATTCTGCT  90 378
NtRootA1_34880 3843159 .. 3843212 + -35.7  -2.80113   CCACAACGAGTGCTT TAACGGCAAGAGCCGGTGGTTCCCA CATC TGGGAACCACCGGCTCTTGCTGTTG TCTCGTCGGCTACTG 100 100
NtRootA1_34970 3855996 .. 3856012 +  -3.5  -3.55444   GAGCACGATGTTCCC              CGACCAC GAT GGGGACG              TTTCGCGGATCGCGC  49 66
NtRootA1_35000 3861035 .. 3861046 +  -2.2  -3.14564   ACAAGGTCAGCCTGC                GGAG CAAT CTTC                 TTAATGGCCACCTGG  43 470
        xseA NONE
NtRootA1_35040 3864791 .. 3864801 +  -5.4  -4.37527   CATCAAGCCGCGCGA                 GAAG ACG CTTC                 TTTTGCTCATTCTGG  68 386
NtRootA1_35150 3875225 .. 3875244 +  -4.3  -3.03124   CGGCCACAAGCCGGG            GGACTCCA AACAC TGG-GTCC            TGTTGGAGAATCCGC  45 64
NtRootA1_35170 3877302 .. 3877328 +  -3.7  -3.06133   CTCCCGCCAAGCCAT        GCCGA-TTTGCC GAAA GGCAAGCTCGGA         TTCGATGGGAACTTC  45 120
NtRootA1_35190 NONE
NtRootA1_35200 NONE
NtRootA1_35210 NONE
NtRootA1_35230 NONE
NtRootA1_35240 NONE
NtRootA1_35250 3884349 .. 3884363 +  -2.7  -2.71791   TCAGCATGAAGCAGC               GCAGC GGTTG GCGGC               ATTTGGCGCAGCGGT  39 150
NtRootA1_35270 3885353 .. 3885395 +    -6  -2.63631   ACGATGCTTTGGCAA TCGAAGAGGCCGCCGGAAGC TGA GCCTCAGGCGGCCTCGGGAA TGCTGTGGGCGTTGA  48 3
NtRootA1_35330 3888079 .. 3888107 + -18.2  -4.63486   AACTCCCACAAGAAA        CCGGCCAGGCAT ATTAC GTGCCTGGCCGG        TTTTGTTGGACCGCT 100 40
NtRootA1_35340 3888708 .. 3888729 +  -3.6  -2.71011   ACGGAATCCACCACC           TGGCTGGT CCCAGT ACCCGCCG            TGATTCCAGCAAGCT  43 1
NtRootA1_35350 3889547 .. 3889558 +  -3.6  -4.53303   GCTGCGAAGCTTGGA                GGCT GGAG GGCC                 TTTTCTGTGGAGCTA  68 62
NtRootA1_35370 3890770 .. 3890806 +   -10  -2.70932   CACCAACGGACTTGT   CGCCAG-CAGCCAGGGC AACA GCCAAGGCAGCCTGGCG    TAGTTCCACGGCCGA  63 196
NtRootA1_35410 3893825 .. 3893836 +  -2.2  -3.03412   TGGATTGACGCATAC                GTGA GGTC TCGC                 ATTTATATCGACTTG  41 33
NtRootA1_35420 3894368 .. 3894380 +  -6.2  -2.50816   CGAACATGCCAGTCC                GCCC GTCAG GGGC                CTTGGTCGCTCCCGG  48 147
NtRootA1_35430 3895171 .. 3895186 +  -7.5   -4.3534   TCAAAGACGCAATCA              GCCCC AATGCG GGGGC               TTTTGCTCCTTCAAC  74 90
NtRootA1_35570 NONE
NtRootA1_35620 3922436 .. 3922446 +  -8.2  -3.61764   GCATCGCGGAGAGCT                 GCGG CCA CCGC                 TTTCGCCATTCCTCC  65 432
NtRootA1_35660 3924322 .. 3924332 +  -8.2  -3.05384   CCGACCGCTGACGGC                 CCCG CAG CGGG                 TTGCGTCCAGCAGAA  57 119
        ybdK 3925642 .. 3925658 +  -6.5  -2.61264   AGTTGAGCACCAAGG              GCTGCCA CCA TGGCACC              GTTGTCCGTGCAGAG  48 136
        celF 3932456 .. 3932467 +  -3.6  -3.75653   ATTAAACTGCATGGC                GCGG AATC CTGC                 TGTTTTGGCTTCCTT  54 192
        mshA NONE
NtRootA1_35770 3936013 .. 3936069 + -18.2  -3.49851   ACCCTCTTAAAGCAA CGCGGGGTCAGTTACGGCCCAT CCGATGGTCAAAC ATCGGCCGTAAGTGACCCCGCG TTGCTTGTGCTGTTG 100 40
        coaA NONE
NtRootA1_35870 3950920 .. 3950973 + -32.7  -2.65106   GTCCTTTTAAACCAG CTCGGCCCGCTCTCCTGATTACCAG TAAA CAGGTAATCAGGAGAGCGGGCCGAA GTTGCTTGGATTCTT 100 62
NtRootA1_35910 3954570 .. 3954583 +  -2.3  -2.84878   TCCCCTGCCCTTCTA               CGGGT GACG GCCTG                ATTTGCCTTGCAGGA  39 146
NtRootA1_35920 3954987 .. 3955036 + -24.4  -3.34517   CTCTAGTTCGCACAC CGGCGGTTGGCCGCGCTGGCAA CTCGTT TTGTCACTGCGGCCGACCGCCG TCTTTAAGGGCACGT 100 35
NtRootA1_35930 NONE
NtRootA1_35940 3956516 .. 3956539 +    -6  -2.87132   TCGTGACGCTCACCG          AGTAGCCGCTC GAA GAGCG-CTACC          TATCTCAGGAAACCC  51 21
NtRootA1_35950 NONE
NtRootA1_35960 NONE
NtRootA1_35970 NONE
NtRootA1_35980 NONE
NtRootA1_35990 3962045 .. 3962075 +  -5.3  -3.17075   CAGCACCAAGGGGTG       GGGTGCAGCCAAG ACAGA CTTGGCATCACGC       TTCCGTTCCAGAAGA  49 251
NtRootA1_36010 3962798 .. 3962839 + -20.2  -3.40639   ATCCATGCGGACACG CAAAAACCCGCCGCCCCC CAAAGC GGGGGCAGCGGGTTTTCG  TTCGTTCATAGACTT 100 119
NtRootA1_36360 3988082 .. 3988098 + -11.5  -4.27316   TCTGTTGGGATGTTG              CCGCCGG TTG CTGGCGG              TTTTCGATTCAGCCG  89 258
NtRootA1_36470 NONE
NtRootA1_36480 4007165 .. 4007176 +  -3.6  -4.08767   ACCTCTACCCGGGAC                CGGT ACCG GCCG                 TTTTACGGCCCTGAC  60 322
NtRootA1_36490 4008748 .. 4008760 +  -9.1  -2.79684   TTCGTTGCTGAGCTT                CGCCA TGG TGGCG                TCCTTCCATTAGTCG  57 482
NtRootA1_36580 4016462 .. 4016492 + -24.2  -3.84451   CGCTTCAAGGTTGAA       TGCTCCCGCACCAA TGT TTGGTGCGGGAGCA       TTTCCGTTTAAGCGG 100 76
NtRootA1_36610 NONE
NtRootA1_36620 NONE
NtRootA1_36630 4021342 .. 4021363 + -18.7  -4.20834   CGTCAGCGACACAAA           GCGCCCCGC ACCT GCGGGGCGC            TTTCGTTATTTTCAG 100 65
      pfkA_2 NONE
NtRootA1_36650 4023297 .. 4023311 +  -4.2  -3.90112   GCGAGCGTGCTGCTC               GGCTGA GCC TAAGCC               TTTACTTCCGCCCGG  57 20
        glnR 4029830 .. 4029865 +   -25  -4.25256   ACTTCAGAGACAAAC    GAAGAGGCCAGGATTC ACAA GAATCCTGGCCTCTTC     TTCTTTTCGTGGAGG 100 48
        mshD NONE
         ppk NONE
NtRootA1_36750 4034442 .. 4034463 +  -4.5  -2.79183   CTTGGGCAGCCGGCG           TCGGTGA-TG AGA CACTCATCGA           TCTACTGAGGGTCCG  44 106
        thyA NONE
NtRootA1_36770 NONE
NtRootA1_36780 NONE
         asd 4037424 .. 4037461 + -25.1  -4.11484   CTGTTTCGTCGTCAA   CCCGCTGTTCTGTTGCT GCCC AGCAACGGAACAGCGGG    TTTTCCACGCTTAAG 100 53
NtRootA1_36810 NONE
NtRootA1_36830 4041133 .. 4041149 +  -9.3  -3.21099   CCACCATGTCCGACG              CCGAGGC CGA GCCGCGG              TTGGTGATCGCCAAG  61 155
NtRootA1_36900 NONE
      ssuB_2 NONE
      ssuC_2 4048436 .. 4048452 +  -4.3  -3.14132   TCGCGCTGGCGGACC              GCAGTGG GCG CGGCTGC              TTCCTAAAACCACCC  45 2
      tauD_2 4049480 .. 4049535 + -29.4  -3.27704   GCTGTCGTAACCCAA CTGAGTCGCAGCTGAGCGCGTTTTGA ACCC TCAAAACGTGCTTAACTGCGACTCAG TTGGGTTTAAGGGAT 100 56
NtRootA1_36990 4057309 .. 4057325 +  -7.9  -4.25104   GGGCACGTTTAGCCA              GAACGCG TGC CGCGTCC              TTTTCATGGGAACCG  76 385
NtRootA1_37070 NONE
NtRootA1_37080 NONE
NtRootA1_37090 4069905 .. 4069935 +  -2.5  -3.55444   CGTCTGGACGTTGAG      GTCCG-CGGCAC CCAGTGCC GTGCCGATGGTC       TTTGGCGAATAAAAG  49 218
NtRootA1_37110 4072554 .. 4072573 +  -7.1   -3.4072   CCGTGCACATCGCGG            CTGCGCC CAGCCA GGCGTAG             TTGTAGTGGCCGGTG  57 163
NtRootA1_37180 4080024 .. 4080080 + -29.7  -3.44146   CGCCCACTGAAGCAA CGCGGAGTCACTTACGGCCCATGTT TGCCCTC ACCATGGGCCGTAAGTGACCCCGCG TTGCTTATGGCGAGC 100 31
NtRootA1_37210 4083233 .. 4083268 + -29.2   -2.7186   GGGAACGCCTTTAAA    CATCGAGGCCGCCGGA ACTC TCCGGCGGCCTCGATG     TGCTTCCGGCGATTT 100 82
NtRootA1_37240 NONE
NtRootA1_37250 NONE
NtRootA1_37260 4088261 .. 4088278 +  -6.9  -4.17048   TGCGGAGCTGGCCGG             CGCGCTC CTGG GAGCGCA              TTGTTTTCCCGCCAC  69 60
NtRootA1_37280 4089168 .. 4089193 +  -2.5  -3.11073   ACATGGACGGATACT         GGCTGGAGACGC CCA GCGTCTG-ATCC         GTTTTCAGTGGCGTG  41 3
NtRootA1_37290 4090143 .. 4090168 + -19.1   -3.6715   CTCGAACGCGAAAAA         TCCCCGGAACC TGTT GGTTCCGGGGA          TTTCCCATTGGGTGG 100 144
NtRootA1_37310 4091363 .. 4091398 + -23.3  -5.04385   TCAGCGTCATAAAAG    CCGGGGTCCGGCGCC ACTCAG GGCGCTGGGCCCCGG     TTTTTTGGCGCTATG 100 59
NtRootA1_37320 4092505 .. 4092517 +  -3.3  -3.26471   AACGCAAAGGACCCC                CATGC CTG GCACG                TTCCTGTCCCCGTCC  45 94
        ycdO NONE
NtRootA1_37340 4095155 .. 4095210 + -24.2   -4.1466   CTGATTCATCTATTA CGTTGCGAACCCGCTATCCCGTTGTT GGCC AACCACGGAATAGCGGGTTCACGACG TTTTAGGCGTTGAGT 100 42
NtRootA1_37370 4098387 .. 4098411 +  -4.4  -2.75712   GGAAGTTAGCTTTGC          CTTATTGTGA ACTGC TCAAAATAAG          TGATTCAATGAGTGC  44 16
NtRootA1_37380 NONE
NtRootA1_37390 4100425 .. 4100466 + -25.3  -4.65933   AGCCGGTAAGTATTA GGCGAACACCCCGTTGCGG ATCT CCGCAACGGGGTGTTCTTC  TTTGTTTTCCACATA 100 48
NtRootA1_37400 4101232 .. 4101259 +  -9.8  -3.70037   CCAGGAACACCAAAA        GCGCCCGGGA ATTGATGC TCCCGAGCGC         TTTCGATGGTGATTC  72 90
NtRootA1_37470 4110487 .. 4110498 +  -7.2  -2.99649   ACGGTGCGAGGTCAC                CCGG AAAC CCGG                 TATATATCAAGCTGT  53 132
      pucR_2 4116845 .. 4116867 +  -3.4  -3.71873   CCACAAAAGTGTAGA           CATTAGACGT CAA ACGTCTAACC           TTTAGATATGGCTGC  52 73
NtRootA1_37530 NONE
NtRootA1_37540 4119109 .. 4119121 +  -3.3  -3.71284   GTTGAGCGCTCCCTT                GACGT GCG ACGCC                TTGTATTCCTCGGGG  54 299
      ansP_1 NONE
NtRootA1_37620 4132027 .. 4132051 + -12.1  -3.40403   AGGTGCGATGTACTT          CGCGACGTTCC CCA GGAGCTTCGCG          TTGTACTCCACCCCC  74 97
NtRootA1_37740 4144329 .. 4144342 +  -3.1  -3.06796   GGAGCGGGCGCAATT               TCG-GG TGC CCGCGA               TTAGCTAGGATAAGA  43 8
NtRootA1_37750 4144794 .. 4144832 +   -11  -5.27938   CTAGGTTTTGACTGG  CAGCCCCTGCGCT-CCC TTTGTT GGGTGGTGTGGGGGCTG   TTTTTGTTTGGGGGT 100 37
NtRootA1_37760 NONE
NtRootA1_37770 4147504 .. 4147518 +  -4.2  -2.79492   CGCGGAGGTCGGTGC               CCGG GGACTTG CCGG               ATTTGACCTTCACGC  42 497
NtRootA1_37810 4151935 .. 4151945 +  -2.4  -3.19522   CTCAGACAGGGACCT                 TCGG GTG CCGC                 TTGCATATTCGCTAA  44 50
NtRootA1_37820 4152917 .. 4152928 +  -2.2  -2.52464   GGGCCCCGCAACGAT                CTGT TTAG GCAG                 TCCGTTCGGGGCCCC  38 73
NtRootA1_37830 NONE
NtRootA1_37840 4154600 .. 4154653 + -28.4  -2.64107   CAGATTCGCTGGCGC CACGCAAACGGGAGGGCGACACCT TTATGT GGGTGTCGCCCTCCCGTTTCTGTG TCCTCTACGAATTTG 100 56
        cytR 4157924 .. 4157949 + -12.5  -5.26119   TCAACATTACATAAA         GTCCGGCGGGG CATG TTCCGCCGGGC          TTTTCTTTTTCCACA 100 49
        lacE NONE
        lacF NONE
NtRootA1_37890 NONE
NtRootA1_37900 NONE
NtRootA1_37910 4165213 .. 4165223 +  -6.8  -3.17075   CTTTCCGCGTTCGGG                 CCCT TCG AGGG                 TTACCTTGAACAGCC  53 426
NtRootA1_37940 4168826 .. 4168838 +  -9.1  -3.23393   GAGCCAGTAACGTCC                GGTGG ACT CCACC                TGTTCTCCACTCGCG  61 197
NtRootA1_37960 NONE
NtRootA1_37970 4171189 .. 4171201 +  -4.7  -3.14683   GAAGACGCTGAACCG                CTGGG CGA CCCCG                TTGCTGACCCGCTAT  47 39
NtRootA1_38020 4179165 .. 4179175 +  -2.4  -3.38046   TTGGTAGCTACGCCG                 CGCC GGA GGCA                 TCTTTCACATGAGCC  46 274
NtRootA1_38030 4180238 .. 4180252 +  -4.2  -2.78935   GCAAGGTGCCTCCGT               GCCC GTCGACA GGGC               TATCCTCACCCGTCT  42 132
NtRootA1_38050 NONE
NtRootA1_38060 NONE
NtRootA1_38070 NONE
NtRootA1_38080 4183090 .. 4183104 +  -3.6  -2.80935   GCCTTCACGGGACGC               TTGATC TAC GATTAA               TCTAATCGATGGAGT  43 90
NtRootA1_38090 4184809 .. 4184824 +  -4.7  -2.57132   ACCGCCAGATGCCAA              GGAAG TGGCTC CTTCC               GTTATCCGGGGAGAA  43 322
NtRootA1_38120 4187327 .. 4187355 + -13.1  -3.14132   CCGGTGCAACTACTT        GGGTACCGGAGGC TGT GCCTCCAGTACCG        TTGGTGCCAGCCGCC  76 192
NtRootA1_38130 4188002 .. 4188017 +  -2.4   -4.4009   CAGGAAGGCTGCGGC              AGGGCT TGGT GGCCCA               TTTTGTGAGGTACCC  65 231
         lrp NONE
NtRootA1_38210 4197815 .. 4197851 +  -6.6  -3.80625   CGACGTGTGGATGCA   GCCG-GAGTGTTCTTCT CACT AGTGGAACACTCGCGGA    TTTAGGTTCTAAAGC  64 4
NtRootA1_38220 4199718 .. 4199748 + -23.4  -3.06133   GATCCCTACGGAAGC       GGGCGGCTTGCACA GTT TGTGCGAGCCGCCC       TTCAATGGCGACTTC 100 40
NtRootA1_38230 NONE
NtRootA1_38240 4204459 .. 4204471 +  -2.6  -3.06133   CTCTGACAATTTCTA                CCTC GTCTA GGGG                TTGAATCAGCCATTG  41 16
NtRootA1_38250 4206464 .. 4206486 +  -7.6  -3.14463   GACGACGCCAGAGCC           GGCGCTTCTG CGT CAGGGGCGCG           TTAGTAAGGCCCGTT  57 44
NtRootA1_38340 4216787 .. 4216813 +  -4.3  -3.09516   CCCGGACCCAGTCGC         GTCCGCTGGTT CCCGA GGCCAGCCGGC         TTCGGTCCTCGGAAA  45 51
NtRootA1_38370 4220517 .. 4220530 +  -5.9  -3.60597   GGCTCCAAAGGCTAG               CGCCG GACT TGGCG                TGTTTGTCCATTTGT  55 26
NtRootA1_38380 4221656 .. 4221693 +   -10   -3.1886   CCTCGGCTGCTTCAA   GGGTCAAGGTGACGC CTAAATGCT GC-TCACCTTGGCCC   TTGGTCAGGTTGGAT  68 44
NtRootA1_38420 4227318 .. 4227330 +  -7.7  -3.34233   CGCGCTACAGGAGGT                GCTGT GTC ACAGC                TTCTGCACGTTGTGG  61 256
NtRootA1_38460 NONE
NtRootA1_38470 NONE
NtRootA1_38480 4233765 .. 4233790 +  -2.5  -4.07687   TCGTGTTCGGGCGAC         CTCGC-TCCGGA GAA TCAGCAGGCGAG         TTTTCGGCCAACACT  56 159
NtRootA1_38490 NONE
NtRootA1_38500 4235502 .. 4235512 +  -5.4  -3.06991   GGAGTAGTGCGGTGA                 GTCA AAC TGAC                 ATTTTGACAGTAGTG  49 26
NtRootA1_38510 4237887 .. 4237906 +  -6.4  -3.78775   CTCAACCATCAATAT            CGGCGATA ATTT TGTTGCCG             TTTCCTGGTCACGCA  61 171
NtRootA1_38520 4238471 .. 4238509 +  -4.5  -3.53012   TCCTATACAAAGCTT  GGCATCGA-CGCACAGCC GCTT GGCTCTGCGATTGACGAC   TTTAACAACACGGGG  53 126
        gmdA NONE
        epiA NONE
NtRootA1_38550 4242017 .. 4242027 +  -2.4  -2.90075   GGCAGTTTTCACCAG                 CAGC GGT GCCG                 TCTAATTCAACCCCA  40 10
NtRootA1_38560 4243526 .. 4243540 +  -2.8  -4.19472   GCATCTGGTCAATAG               TGGTGA CAA TCATCG               TTTTGGGCTGTGTTG  60 144
NtRootA1_38570 4245253 .. 4245291 +  -8.9  -3.35467   GATGTCATCAAGGCG  CCGT-CAGTCCCGGCTTG TGAA TAAGCCGAGACTGGAAGG   TTAATCCTTTGTAAC  64 2
NtRootA1_38580 4246092 .. 4246132 + -25.7  -4.79451   CACGCTTCAAGCCAA  GGGTGGCTTGTCGACGAAG ATG TTTCGTCGATAAGCCACCC  TTTTCTGTTTCGCGT 100 47
NtRootA1_38610 4249700 .. 4249722 +  -7.6  -3.17075   CCCCACAGGATAAGC           GTCGGGGCCG AGA TGGTTCCGGC           TTCCGTTGGCGGGAC  56 232
NtRootA1_38670 4255527 .. 4255542 +  -3.2  -3.31144   ATCCCTTGGCCGCTG              CAACGG ATAT CCTTTG               TTATGCCCATCCCGG  45 67
NtRootA1_38680 4256313 .. 4256330 +  -6.2  -2.90496   GGGCCGGAAGAGATG             GCTGCG AAAAAG CGCGGC              TGATTTGCAGCGGGG  51 5
NtRootA1_38690 4256904 .. 4256914 +  -8.2  -3.13403   GGGGTCGAGGAGTTC                 GCGG ACA CCGC                 TATTGCTGGCGGAGC  57 48
NtRootA1_38720 4261045 .. 4261067 +  -2.7  -3.75665   CGCCGCTTCGTCACT          GCGTTCGACGG CGG CCG-CGAG-GC          TTTCGTACCGTGTCG  52 262
NtRootA1_38830 4270986 .. 4271000 + -11.4  -3.09834   TGATCCGCAGGCTCC               CGTGCG GGC CGCACG               TTGGATAATCGAGTA  69 56
NtRootA1_38840 4271426 .. 4271442 +  -5.8  -3.30159   CAGCATCAATCTTCA             CGCC-CG ACGC CGTGGCG              TTGTCCACCAGTTGC  52 128
NtRootA1_38890 4276318 .. 4276332 +  -5.6  -3.67976   GTCGTCGTCGATTCC               CTCGGG TAG CCCAAG               TTTGGCCTTCATGCC  57 467
NtRootA1_38970 NONE
        eddA 4286208 .. 4286218 +  -4.6  -2.87468   CCGGTCACTTAAGCC                 CGCT TTC GGCG                 TATGCTCTCCTCAGC  46 137
NtRootA1_39000 NONE
NtRootA1_39010 4290650 .. 4290690 +  -2.6  -2.91681   GTGGACTGAGCGTCT GGGCGCTCTGA-GCGAAATC GCT GGTTACGTGTCAGA-CGCCG TCTATAGAGTTGCCA  40 32
        ptrB NONE
NtRootA1_39030 NONE
NtRootA1_39040 4293930 .. 4293951 +  -5.1   -2.6155   AGCGTTCCGTCCATG           GTCGCGA ACAGCACA TCGCGGC            ATTCCTCTTCCGCAA  43 155
NtRootA1_39060 4295758 .. 4295786 +  -2.4  -3.53031   GCGCGATCCGACGAC       GGGCAGCAGGTTTG CGG CCAGC--GCTGCCC       TTCCTTTGGAGTCCA  47 349
NtRootA1_39090 4298726 .. 4298757 + -14.4  -3.70149   CAGTCCGCAACAAAA      CTGATGCCCCGAGC AATG GCCCGAGGCATCAG       TTTGAGTCATGTGGC  95 201
NtRootA1_39110 NONE
NtRootA1_39120 4301801 .. 4301812 +  -7.2  -3.96892   ATAAATGTTCTCGGT                GGCC CACT GGCC                 TTTGTAGTGCCAGTT  70 142
        paaI NONE
        paaK NONE
NtRootA1_39160 4305069 .. 4305117 +   -27  -3.19246   TCACATCCAAGCCCA TAAACGCGAAACGCTTCCCCGC CCAAT GCGGGAAAGCGTTTCGCGTTTG TTGACTTGACGTTCA 100 209
NtRootA1_39180 NONE
NtRootA1_39190 NONE
NtRootA1_39200 4310456 .. 4310508 +  -9.8  -4.56775   CGCGGCGCCAGCAAC CATGCTCGA-TGTGGCGCGGGCGGC CGGC GTCTCCCGCGCTACAGTTTCGCGTG TTTTTACAGCGCCAT  87 41
NtRootA1_39210 4311460 .. 4311516 + -36.9  -3.47403   CCCGCTAAACAGCAA CGCGGGGTCACTTACGGCCCATGTTTG CTG TGAACATGGGCCGCAAGTGACCCCGCG TTGCTTCTAAGTTGG 100 33
      lacI_3 NONE
NtRootA1_39250 NONE
NtRootA1_39260 NONE
NtRootA1_39270 NONE
NtRootA1_39280 NONE
NtRootA1_39290 NONE
NtRootA1_39300 4322617 .. 4322639 +  -4.1  -4.28994   TGACAGTGAGGGTCG          CCTCCGGAGC CGAG GCTC-GGATG           TTTTGATAGATGATC  66 464
NtRootA1_39470 NONE
        menB NONE
        menE NONE
        menA 4342082 .. 4342094 +  -6.9  -3.85698   GCATGGCCGCAGTGG                CGGCG TCG CGCTG                TTTCTGGAAGAAGAG  65 181
NtRootA1_39520 NONE
NtRootA1_39530 4343497 .. 4343509 +  -7.7  -3.03771   GAGTATGAGTGCAGG                CCGTT GAA AACGG                TGTTCACGAGTGTGA  57 130
NtRootA1_39590 4348351 .. 4348361 +  -2.6  -3.09803   TAGTAGAACTCAAAG                 TTTT CTC AAAA                 TGTTCCGTGGAGTTG  41 38
NtRootA1_39600 4349101 .. 4349135 + -15.1  -3.62096   GCAGTCCCGAGTAAA    CGGCGCCCCGTCACAGT TCC GCTGTG--GGGGCGCCG    TTTCGCGTACTCAGA  88 72
NtRootA1_39620 4349986 .. 4350014 + -24.7  -3.78775   TGACAGGTGAACAAG        GCCGTGGTGGTCC ATT GGACCACCACGGC        TTTCATCATGAAGGC 100 83
NtRootA1_39630 4351102 .. 4351151 +   -18  -3.37796   CTGTCATAACGTCAG CGGGCGCGGAC-CC-GGTAAGGCT AGAC AGCCTGACCCGGTGTTTGCGCCCG TTGTGCGTGGTACGC  93 54
NtRootA1_39660 NONE
NtRootA1_39670 4354557 .. 4354572 +  -6.2  -3.62046   GCATTCACGCTTGGT              GAAGTA TCTC TACTTC               TTATTGCGGCGCTGG  58 253
NtRootA1_39780 4365717 .. 4365729 +  -6.9  -3.74519   ATTGAGGAGTTGGTT                CGCCG AGA TGGCG                TTTGATGGCAATGTT  63 8
NtRootA1_39840 4373293 .. 4373348 +   -38  -3.05384   ACTAACCCAACCCAA CTGGGTAGCAGCAGTGCGCGTTTAGA CCCC TCAAAACGCGCACTGCTGCTACCCAG TTGGGTGCGCGCGCG 100 36
NtRootA1_39860 NONE
NtRootA1_39890 4378570 .. 4378580 +  -5.4  -2.74012   CCTCCATCGACTCGG                 TTCC GCC GGAA                 TGCTTGAACTGGTGG  47 144
NtRootA1_39910 NONE
NtRootA1_39920 NONE
NtRootA1_39980 4388866 .. 4388922 + -24.6  -3.37895   CGCCTAGAAATGCAA CGCGGGGTCACTTACGGCCCAT-CCGG AAGG CCATCATGGGCCATAAGTGACCCCGCG TTGCTCTATCTTCCA 100 34
       lldD2 4391055 .. 4391110 +   -20  -3.09516   CCAGCGCTAACCCAT GTAGGTAGCAATAGTGCGCGTTTTGA ACGT TCAAAACGCGCACTATTGCGACTCAG TTGGGTAATGGACGC 100 31
NtRootA1_40030 4394200 .. 4394217 +  -6.9  -3.31461   TCGTAGCCGCCCCCG             CCTGTGG CCAC CCACCGG              TTATCGCAATACCTC  55 333
NtRootA1_40050 NONE
NtRootA1_40060 4397406 .. 4397429 +  -8.1  -3.24747   TTGCGAGGTTAGGGA          GCGGTTGGG GACTAG CCCAGCTGC           TTGGTGATCTCGGCC  59 80
NtRootA1_40140 NONE
NtRootA1_40150 4407458 .. 4407484 +  -8.6  -2.74322   GTTGGCGCTCAGGCG         GCTTCGCAGCCT TCG GGGCAGCGAAGG         GTTTCAGGACTTGAG  58 46
NtRootA1_40170 4409294 .. 4409311 +  -6.3   -3.4493   AGAGTGACAGAATGA             TTTGGTG GCAG CACCGAA              TTCGTTGATCTCTCT  56 105
NtRootA1_40180 4411991 .. 4412007 +  -2.1  -3.16191   CCCAGTGTTAGCGCC              AGAACCG TGC CGGATCC              TTGCTCAGGGTGTGA  43 376
NtRootA1_40260 4418841 .. 4418852 +  -2.2   -3.2963   TTACGACAAAACGAA                GTAG GCAC CTGC                 TTGTCCACCCCTGCT  44 22
NtRootA1_40270 NONE
NtRootA1_40280 NONE
        acsA 4425702 .. 4425741 + -29.4  -2.52543   CTCGGACCCACTAGT  CGACGGCGCCGCTCCCCT CCCA AGGCGAGCGGCGCCGTCG   TGCGTTCAAAAGGAT 100 46
NtRootA1_40330 NONE
NtRootA1_40340 NONE
NtRootA1_40350 4429102 .. 4429131 +  -6.3  -3.07895   CCATCGCCTCCACAG       GTTGGGCCACGGT AGTC AGCGCGGGCCAAC        TATATTCGGAATCGA  51 263
NtRootA1_40380 NONE
NtRootA1_40390 NONE
NtRootA1_40400 4434739 .. 4434755 +  -2.1  -2.54566   CTCTTCAAGTAAAAC              CCCTCCC GTT GTGAGGC              CTGTTCTGCGCTCTT  38 29
        galA 4437047 .. 4437094 + -12.9  -2.90212   CTCTCACATCCAGAG GGCTTCCCGGGAA-CCTTCT CTCACATCC AGAGGGCTTCCCGGGAACCC TCTCTCACATCCTGA  74 46
NtRootA1_40440 4439777 .. 4439803 + -17.3  -5.14563   TGTCCTTGCAAAAAA         GCCGCTCCGGT AATGA ACCGGGGCGGC         TTTTTTCGTCGGGAC 100 44
NtRootA1_40480 NONE
NtRootA1_40490 4444845 .. 4444865 +  -2.4  -3.57144   CGCACGGACTATTAC            GAACCCCA ATAAC TGGGGAAC            TTTCCACATAGCAAA  47 59
NtRootA1_40500 NONE
NtRootA1_40510 4448604 .. 4448626 + -11.3  -2.75844   CGGGACTCGCTCGTG           TGAGGAGCG ACACC CGCTCCTCG           ATTTCGCATCCCGCA  66 23
NtRootA1_t00550 4448768 .. 4448789 + -12.3  -5.38054   CGACCAAAAAGGAAA           TGGCGTCGA GAAA TCGGCGCCA            TTTTTGTTTGTCCGG 100 35
NtRootA1_40520 NONE
NtRootA1_40530 4450673 .. 4450713 + -14.1   -4.2679   ACGAAAACACACAAA  AAGCCCCGGACCAGT GGTGAACTTGA ACTGGTCCGGGGCTG  TTTTGGTGCAACTTA 100 47
      ansA_1 NONE
NtRootA1_40570 4454611 .. 4454637 + -19.6  -3.12351   TTTGCGTACAGCCAA         TGCCCTCAAGAC GGC GTCTTGAGGGCA         TTGGCTGTACACAAA 100 45
NtRootA1_40620 4462674 .. 4462718 + -28.9  -3.66803   ATAACAGGGCATAAA AACAGTTGGCGGCAGTGTTCA TGA TGAACACTGCCGCCAACTGTA TTTGCGGTGTTACCG 100 51
NtRootA1_40640 4463758 .. 4463813 + -23.6  -3.12668   CCGGATGTCACCCAA GTAAGTCGCATTTGTGCGCGTTTAGA AGGC TCAAAACGCGCACAAATGCGACTCAG TTGGGTATCAGCGTG 100 54
        atzB 4473020 .. 4473064 + -18.8  -2.66316   GCGCCCGTTTCGATG CTCCCCTGCACGTTAGACGGT AGGA GTCGTCTAGCGTGCAG-GGAG TCGTCTAGTCGGCGA  95 76
NtRootA1_40730 4475631 .. 4475644 +  -4.5  -3.40403   CGCCTGTTGCATGGA               GC-GGC ATC GCCGGC               TTCTGCTAAGCACCG  51 3
NtRootA1_40740 4477373 .. 4477407 +   -23  -3.89524   ATTCAAGTTGGCAGA     TGACGGCAGCGTTTCC TTG GGGGACGCTGCCGTCA     TTTGTCGCCTCGCGT 100 52
NtRootA1_40750 4478308 .. 4478332 +  -8.6  -3.17051   GGGCGTGGGCATGCC         GGTTCG-GGCA ACAA TGCCACGGACC          TGTTCGTCGTCGAGC  58 371
NtRootA1_40770 NONE
NtRootA1_40780 4482043 .. 4482055 +  -3.4  -3.71552   TACGAACTGGTGGGC                TGAG ATGGG CTCA                TTCTCTTCCTCAGAT  52 23
NtRootA1_40790 NONE
NtRootA1_40800 4484121 .. 4484133 +  -7.7  -2.62983   GGACATGAACCGCCA                GGTGA AGC TCACC                TAGTCTGCGCCTGCG  53 10
NtRootA1_40830 4486529 .. 4486540 +  -5.8  -3.33792   ACCATGGATCGGTGG                CGTC CGCA GACG                 TATTCTGTAGCTACT  53 72
NtRootA1_40840 4488880 .. 4488893 +  -2.3  -3.82261   TCCTCCCGCAGACTA               GGCCT GTGA AGCCC                TTCCTTTTGTTGGCC  53 136
NtRootA1_40850 NONE
NtRootA1_40860 4491091 .. 4491106 +  -3.2  -4.09108   TGCCAGTCACGTGAT              CTTCAC GAAC GTGGGG               TTTCTGTAACTTACC  58 102
       amt_2 4492576 .. 4492620 +   -23  -3.14132   GATTCTACTGAGGCA ACAGGCGGACGACGGCGGCAC TTGA GTGCCGTCGTCGTCCGC-TGC TTGGTGGGGGCGAAC 100 43
NtRootA1_40900 NONE
NtRootA1_40910 NONE
NtRootA1_40920 4499281 .. 4499308 +  -7.6  -3.28712   TAGCTCCGGCCTTTC        GTCCGTGGCGCGC TAA GC-CGCCAAGGCC        TTCTCCACCGCAGCG  59 10
NtRootA1_40940 4500036 .. 4500046 +  -2.4  -3.38036   ACGCTTCTCCTTAGT                 CGCC AGG GACG                 GTTTTTGGGATCATT  46 27
NtRootA1_40950 4502897 .. 4502907 +  -2.4  -3.11634   AAGCAGCAGAATGTA                 ACCC AAA GGGG                 TTGAATCCTCTCCCC  41 74
NtRootA1_40960 4503775 .. 4503813 + -18.9  -3.01791   ACACGAAACAAACAA   CCAGTGCCGCCCGGATC ACCAC GATCCGGGCGGCACTCC   TGTTAAAGCGACGCT 100 50
NtRootA1_40980 4507243 .. 4507265 +  -2.6  -3.02511   ACCGACGAGGATGCG          GCCCC-TGC GAAGAA GCTTGGGGC           TGTTAACGGCCTGAG  41 153
NtRootA1_40990 4507481 .. 4507524 +   -37  -4.43844   GCAGCTCAAACTCAC CGCAAGAGGACGACGCCGGG ACCT CCCGGCGTCGTCCTCTTGCG TTTTCTGCGTCGTGA 100 41
NtRootA1_41000 NONE
NtRootA1_41010 4508980 .. 4509033 + -14.8  -3.65812   CGTAAGAGAAACCAG CAAACCCGCAGTTGTGTCG-GAT CACGCCCCC AGCGCGACACAACCGCGGGTTTG TTGTCTTAACCCACC  95 43
NtRootA1_41030 4511220 .. 4511254 +  -5.6  -3.53012   CAATGGTCTCCGGGT    GG-TCCAGGTGCAGG CCATGT CCCGCGCCGGGAACC     TTTACAAGCACCGAA  55 99
NtRootA1_41050 4512586 .. 4512602 +  -7.9  -2.53263   GGGCGAGGCAACGGT              GCTGCGG CCC TCGCGGC              TACCTTAAGCGTGGC  53 1
        mmyP 4519786 .. 4519799 +  -2.3  -3.72695   CCCCCAAGTATGCTG               AGGAC AACA GTCCA                TTTGATGGGGAAAGT  51 68
NtRootA1_41120 NONE
        rifR 4520879 .. 4520914 +   -22  -4.08216   CGTTGCGATGGAAAA    AGCCTGACGACACCCA AATG TGGGTGTCGTCAGGCC     TTTTACGGAGCGTGG 100 54
NtRootA1_41180 4525154 .. 4525203 +  -7.7  -3.55444   ACCCAAAATGGTCTG GACATCATGGGCAGCGT-CCGCGA GCT TCGCGGCGCGCTTCCCGTGGACAC TTTCAGCGGTGGCCG  62 230
NtRootA1_41280 NONE
NtRootA1_41290 NONE
NtRootA1_41300 4535522 .. 4535534 +  -6.2   -2.7035   CATGGCTGACTGCGG                CGCC GCCGA GGCG                TGATCTATGCCTCAA  48 32
NtRootA1_41310 4536213 .. 4536238 +  -5.4  -3.54424   GATTTGTGCCAGCAC         TCGGCTAGTG TGGGCT CACTTGTCGA          TTTGGGACCATGGGG  55 55
NtRootA1_41320 4537402 .. 4537433 + -23.2  -3.67611   GATCACTGCTGCAGT      GAGCGGGTTACTCC GGAT GGAGTAACCCGCTC       TTCTATTGGGCTGAG 100 80
NtRootA1_41330 4539609 .. 4539653 +   -22  -3.41602   AAGTAGGCGCACAAA GCCCGCCTCGGACGCGTCCC ACGAA GGGTCGCCGCCGGGGCGGGC TTCTGCTGCGATGAC 100 232
NtRootA1_41470 NONE
NtRootA1_41510 NONE
NtRootA1_41520 4554974 .. 4554993 + -12.2  -3.28712   TCACCCCAGTCAGAA            CCATACCG AAAT CGGTATGG             TTCTGACGGGGCGGA  75 101
NtRootA1_41530 NONE
NtRootA1_41540 4556646 .. 4556659 +  -2.4   -2.8001   GCGACTCAAGCTTCT               TGAG CTACTC CTCA                TCTGATAGCCATTCT  39 185
NtRootA1_41650 NONE
NtRootA1_41660 4572617 .. 4572650 +  -8.7  -3.30124   AGGCTTGGGCTGCCG     GGTTGCCAGCAACCC GGCA GGGCTGAGGGCAGCC      TTGTGGACACTGCAG  63 0
        aroQ 4573452 .. 4573464 + -10.5  -3.41693   GGCGCTTGCTGATGG                CGCCG CAG CGGCG                TTAGTTGATGCTGGC  69 351
NtRootA1_41690 NONE
        rifL 4575412 .. 4575434 +  -4.1  -4.86731   TCGTGTCGCATCCTC          GAGGT-TGCG ATAC CGCAGACCCC           TTTTATTTGACGAAC  75 129
        aroA 4577138 .. 4577155 +  -2.1  -3.06509   CTTCAGCGGACGGCA             TTTCA-AG CCA CTCTGAAA             TCTCCTTGTTTCGCG  41 384
NtRootA1_41740 4579466 .. 4579480 +  -7.8  -2.55351   CAATCTGAAATCTCG               GGTCCG GTA CGGATC               ATTGCTCTGCCCGGC  53 178
NtRootA1_41760 NONE
NtRootA1_41770 NONE
NtRootA1_41780 NONE
NtRootA1_41790 NONE
NtRootA1_41800 NONE
NtRootA1_41810 4587082 .. 4587095 +  -2.3  -3.03439   CACCGTGCGCGGACC               TGCGG AATA CAGCA                TCTAGTTTGGCTGTT  41 7
NtRootA1_41820 4587758 .. 4587795 + -18.6  -2.57501   ATAACTGCACAATTT   TTGTAACGCCCGCTCA CTATTA TGAGCGGGCGTTACAC    GTCTCTTTACTAAAC  95 116
NtRootA1_41830 NONE
NtRootA1_41840 NONE
NtRootA1_41850 NONE
NtRootA1_41860 4591842 .. 4591872 +  -5.2  -3.22475   CAATCCTCTCTCACC       TCCCGCGCCACGTC CCG GACGCAGGGTGGGG       TGTTCTGCCCATCGC  51 102
NtRootA1_41870 NONE
NtRootA1_41880 NONE
NtRootA1_41890 4594221 .. 4594255 +  -3.4  -3.58343   TTCTCCAGAAGGTAA    GAG-CGGACGGCGGC CGAGTT GACGCCGTCGGGCAC     TTTCACCGTGGTGAG  51 287
NtRootA1_41910 NONE
NtRootA1_41920 NONE
NtRootA1_41930 4597203 .. 4597235 + -14.4  -2.87132   TAATTTGTTTGCAGC     TAATGCCCCTCCAGA GCAA TCTG-AGGGGCATTA      TCTGTACACAAACCC  82 48
NtRootA1_41940 4597605 .. 4597636 +  -2.1  -3.55444   GTCCAGAGCACGACG      GC-GCCCGCTAGGC ACCCA GCCCAGCGCACCGC      TTTCGGGGGTACCAC  47 15
        purF NONE
        purM 4600546 .. 4600593 +   -20   -4.8269   CGCGTTTCCTCTTAG TGAAAGAGCGGCCGGACAGTTG AACT CAACTGCACGGCCGCTCTTTTG TTTTTGCTGCTTGTA 100 42
NtRootA1_42000 4604055 .. 4604070 +    -4  -3.61517   AGACCTCCTCAGCAG              GTAGCT CCCG AGTTAC               TTCTTCCGAACCAGT  51 22
NtRootA1_42020 4607666 .. 4607702 +  -3.6  -2.70932   GACCCGGCCGCCCTG   ACGCGGATCTGGTCGCC GTGC GGCT-CCAGATCCCTGA    TGGTTACGGGAAACG  40 174
NtRootA1_42070 4612223 .. 4612242 +  -4.9  -3.53012   AGTTGCTGTGAACCA            CACAGGC AGTGAA GCCCGTG             TTTCCGGGGCGGACG  53 60
NtRootA1_42080 NONE
NtRootA1_42090 4613955 .. 4613998 + -11.6  -2.64616   CCACCGGTTAGACGA CTCGCTGCAGGCCAGACGGT AGGA ATCGTCTGCCGGGCTGCGAG TCGTCTAAATGGAGC  66 30
NtRootA1_42130 4616652 .. 4616687 +  -6.8  -2.69932   GTTCAGTACCCGGCA    CGCGACAAGACTGG-CC AAA GGATCTGTCATGTCGTG    GTTAATTCTCATTCT  50 131
NtRootA1_42140 NONE
NtRootA1_42150 4617463 .. 4617484 +  -2.1  -2.62184   CCCGAAATCACAGGG           GCGGGCATG CAGG CGTGCCGGG            TGCTATCCGGACCAA  38 105
NtRootA1_42160 NONE
NtRootA1_42170 4619642 .. 4619652 +  -6.8  -3.39895   CACGTGGGCTGCGGG                 CGAC GTC GTCG                 TTCATTGCTGCGCGA  57 389
        soxR NONE
NtRootA1_42220 4626375 .. 4626398 +  -3.1   -3.6106   TGTGGCCGTTGAATC          CGGGTTCAGC ATCCA GCC-AACCCG          TTTGGCCGTATTCAA  51 149
NtRootA1_42240 NONE
NtRootA1_42250 4630024 .. 4630035 +  -2.2  -3.28924   AGGGCAAGGACCTGA                CG-GC CTA GCTCG                TTGTGAGGCCCGCTC  44 18
NtRootA1_42270 NONE
        trmB NONE
NtRootA1_42290 NONE
NtRootA1_42300 4634463 .. 4634474 +  -2.2  -4.32034   TACGGGACTGAAATC                GACG CCAC TGTC                 TTTTCATCCTCATCC  62 30
NtRootA1_42340 4636310 .. 4636333 +  -6.6  -4.12902   GATGATCAAGGGCGC          TGCAGCCGGC TACT GACGGCTTCA           TTTTCGGGCTCGTTC  69 10
NtRootA1_42370 4642183 .. 4642202 +  -3.4  -4.08767   CATTAATAGGGGGAG            CCGCAGTG ACCA CTCTGCCG             TTTTCGACGCATGAA  58 92
NtRootA1_42380 NONE
NtRootA1_42410 4650298 .. 4650308 +  -2.4  -3.62597   GCACGGTAGATCGCC                 CGGC CGC GCCA                 TTCTTCGAGCGTCGC  47 307
NtRootA1_42450 NONE
NtRootA1_42460 NONE
NtRootA1_42470 NONE
NtRootA1_42480 NONE
NtRootA1_42490 4660760 .. 4660799 +   -26  -3.05816   TCTCGCACATCCCGA  CGC-AAGAAGGGGACCAGC TCA GCTGGTCCCCTTCTTCGCG  TTCAGTGGCCGCTAG 100 194
NtRootA1_42510 4661948 .. 4661961 +  -3.8  -2.80816   CCCCGCAGCGTAGTC               TGGC AACGGG GCCA                TCTACTCCGTGAGGG  43 77
NtRootA1_42520 4662458 .. 4662493 + -13.2  -3.21962   GCAGGTCGGATTAGT    GCCCGGCTGGTCCGGT TCCT GCCGGGCTAGTCAGGC     TTGGCTTCATCGTGT  79 42
NtRootA1_42590 4668879 .. 4668896 +  -3.3  -3.85698   CGTGGCGCTTGTCCG             GCTGGGC GGCG GCTCAGG              TTTATACACCCACGC  56 131
NtRootA1_42630 4672444 .. 4672454 +  -6.8  -2.71731   CAGATTCAATCGAAT                 GGAG TTA CTCC                 TGATTCCCCAGTGAC  51 79
NtRootA1_42640 NONE
NtRootA1_42650 NONE
NtRootA1_42660 4675251 .. 4675302 + -12.8  -3.13522   CCGTGGGTCGGGCCG GGGCTCGGGTTCTCCGGGTGCCGG CGCG CCGGCACCTTCGGGTTCGGAGCCC TCTTCGTGGGAAAGT  76 104
NtRootA1_42670 NONE
NtRootA1_42680 NONE
NtRootA1_42690 NONE
NtRootA1_42700 NONE
NtRootA1_42710 NONE
NtRootA1_42720 NONE
NtRootA1_42730 NONE
NtRootA1_42740 NONE
NtRootA1_42750 NONE
NtRootA1_42760 4685392 .. 4685441 + -25.3  -2.72344   GGACTAACCCAAGTA GGTCGCATTTGTGCGCGTTTTGA CGGC TCAAAACGCGCTTAAGTGCGACC TAGTTGGGGGTGCCA 100 34
NtRootA1_42780 NONE
      rpoE_3 4688089 .. 4688105 +  -5.1  -3.21099   AGTCCCCCGCCGAGC              CGCTC ACGCGCA GAGCG              TTGATGATCGCGGGA  49 137
NtRootA1_42840 4693856 .. 4693869 +  -3.7  -3.55801   TCAACGGATTCCTTG               GCCGC CTTG GCAGC                TTTACGGGACTTGAT  53 393
NtRootA1_42860 4695751 .. 4695806 + -39.6  -3.17723   GGTTTCCTGGCCCAA CTAAGTCGCAGTTGAGCGCGTTTTGA CCCC TCAAAACGCGCTCAACTGCGACTTAG TTGGGTTGCCGGTCA 100 47
        pheA 4697198 .. 4697209 +  -5.8  -3.73775   CCATCAAATCCTTGA                TCCG GTGG CGGA                 TTTCATCGCGATCCC  58 492
NtRootA1_42930 NONE
NtRootA1_42940 NONE
NtRootA1_42950 NONE
      ppsA_2 4705331 .. 4705343 +  -3.4  -3.40403   CTCGCGCACCCTGCT                CATC AGGAA GATG                TTGTAATCCACACCC  49 360
NtRootA1_42980 NONE
NtRootA1_42990 4708877 .. 4708888 +  -2.2  -3.60627   CCAAACAGGGCGCCA                CTTC ATAA GGAG                 TTTGAGATGAAATAC  47 213
NtRootA1_43000 NONE
      rpoE_4 NONE
NtRootA1_43020 4711520 .. 4711531 +  -7.2  -3.56092   CATCCGCTGCGGGTG                GGGG TGTG CCCC                 TTTCGGGCCTCATCG  60 67
NtRootA1_43050 4713469 .. 4713491 +  -3.2  -3.72576   CCCGGCCTTCCATCA           GCCCGCGGAG TTG CTCACCGGCC           TTTCGTCCAAGCGGG  54 126
NtRootA1_43070 NONE
NtRootA1_43080 NONE
      rbsK_2 4718448 .. 4718460 +  -5.5  -3.65199   GGGGCAGTCGCCGGC                TCGGC AGC GTCGA                TTTCGGTAGCAGCTT  57 424
NtRootA1_43110 NONE
NtRootA1_43120 NONE
NtRootA1_43130 4722007 .. 4722028 +  -9.4  -3.32268   CGCAAGTTATTGGAG           CGTCGCGG TCAATC TCGCGACG            TTATCCACATACTTG  66 87
NtRootA1_43150 NONE
NtRootA1_43160 4724655 .. 4724670 +    -4  -3.52482   TCCTTGCACTGGGTG              TTCGTC ATGT GATGAA               TCTTGTTCTCGTGTT  51 185
        ybgF 4726209 .. 4726257 + -22.7  -3.53444   GACCTTCTTTGCCTG C-AGATCAGCCCCTGCGCAACC ATTCCG GGTTGCCCAGGGGCTGATCTCG TTTCAAAGCAGGTCA 100 39
NtRootA1_43220 NONE
NtRootA1_43230 NONE
        metZ NONE
NtRootA1_43250 4734302 .. 4734320 +    -3  -3.54424   GTCGGCACCGAGGCG             GGCTCAAC GCC GTCGAGCA             TTTCCAGGGATGCGG  51 434
NtRootA1_43310 NONE
NtRootA1_43320 4741252 .. 4741308 + -31.8  -3.66429   GCATAGGCATTCCAA CGCGGGGTCACTTAGGCTCCCTCACCG CCGT CGG-GAGGGCGCGTAAGTGACCCCGCG TTGTTCCGGGTTGTT 100 46
NtRootA1_43390 4749362 .. 4749388 +    -3  -3.27994   CGCATCGGTGTCGTG         GAGCTTCG CGAGGGCGAGA CGGAGCTC         TTCGTGTCCACTTGG  46 175
NtRootA1_43410 NONE
NtRootA1_43420 4750982 .. 4751002 +  -8.2  -2.61695   CGGGTAGCGCTGAAC            GCTTGGCG CCTGA CGCCCAGC            CTGTTTCCGGCTAGA  53 41
NtRootA1_43440 4752407 .. 4752418 +  -3.6  -3.35679   CGGATCCGGACAACG                GTGC CCTC GCGC                 TTCTCCCTGACGACA  49 4
NtRootA1_43450 4753773 .. 4753787 +  -4.3  -3.33922   CCATGGTTTTTTGGA               TCATG CTGTT CATGA               GTTTTTGCAAGCCCT  48 118
NtRootA1_43470 NONE
NtRootA1_t00560 4756031 .. 4756058 + -17.8  -2.90075   TCGCCCGCTCACTCA        TGACCCCTTGCC TCCG GGCAGGGGGTCA         TCTCGTTAAGAACCC  90 28
NtRootA1_43480 4756810 .. 4756824 +  -4.2   -3.3344   AGCCCACGCTGACGC               CCGG CCCCGAT CCGG               TTATGCCGCTTGGGT  49 89
NtRootA1_43500 4759348 .. 4759358 +  -8.2  -2.59564   GATATCTGTTCAACA                 GGCG ATA CGCC                 CTTATCGGGTAAGCG  53 152
NtRootA1_43510 4760629 .. 4760653 +  -5.6  -3.14344   GCCGCTCGGCCAAGT          CTGCCGCCAC CACCA GTGGGGGAAG          TTCGTCGGGGACGTG  51 486
NtRootA1_43550 NONE
NtRootA1_43560 NONE
NtRootA1_43570 4765918 .. 4765950 + -22.1  -4.57837   CCACCCCCCAAGCAA      GCGAGCCCCTGCC CGGTCAC GGCAGGGGCTCGC      TTTTTCGCCCCCTGT 100 101
NtRootA1_43580 4766499 .. 4766516 +  -7.7  -3.31263   GACTTGAGCTTCCTG             CGGG-TGG CAC CCAACCCG             TTGTCGCCCTGGGCT  58 235
        xylA 4770333 .. 4770352 +  -7.1  -3.64716   TCGCAATTCCGTCGC            CGGGACC ACACGA GGTTCCG             TATTTTCCGGACTGC  63 52
        xylB 4771859 .. 4771877 +  -8.8  -2.78596   AGGCGGCCATGGGCT             GATCACCG CGC CGGTGCTC             TATCGTGACAGGGTG  58 24
NtRootA1_43640 4772922 .. 4772938 +  -4.3  -3.05963   AGCTAACCCAAGCGT              GCAGTTC TCC GGACCGC              TCTTGACATCAAAGT  45 35
        araB NONE
NtRootA1_43660 NONE
        araA NONE
NtRootA1_43680 4777917 .. 4777972 + -30.8  -3.05384   TCCCGCGGCACCCAA CTGAGTCGCATTAGTGCGCGTTATGA GCCT TCAAAACGCGCACTACTGCGACTCAG TTGGGTGAGCCGGCC 100 43
        rhaM NONE
        rhaI NONE
        rhaD NONE
NtRootA1_43730 4784570 .. 4784626 +  -5.7   -2.9518   GGTACGGGGCAGCCA GCCGCCGGTGCCGTCGCCGG-GAT AAAGCCACAA ATCACCGGCACCGTCACGGGCGAC TATGTCCGTCTTGCC  48 387
        panD 4786765 .. 4786807 + -17.1  -3.75845   CCCGGCCAAAAGCCA AAC-CTCGACGTCGGCACTC ACCA GAGTGCCGACGTCGAGCGCG TTTCGGGTTGTTTTA 100 41
NtRootA1_43810 4791654 .. 4791697 + -21.8  -3.85817   AGCCGGGAAAAAACT AATGCTCGACGTCGGCACTC ACCT GAGTGCCGACGTCGAGCGCG TTTGTACAGCACGAT 100 24
NtRootA1_43820 4792770 .. 4792817 + -22.2  -2.54193   GCCTCCCCCAACTAG GTCGCATTTGTGCGCGTTTTGG GCGC TCAAAACGCGCTCAATTGCGAC TCAGTTGGACTACTC 100 48
NtRootA1_43870 4799728 .. 4799738 +  -8.2  -3.14211   GAACATTTCGCCGGC                 GCCG TCC CGGC                 TTGATCCGGAAACAT  57 60
NtRootA1_43880 NONE
NtRootA1_43890 NONE
NtRootA1_43900 4801671 .. 4801687 +  -7.9  -2.73364   CCGACGAATCAACGG              GCCGGTT TGT ATCCGGC              TCCTTCCAGTCACCC  54 190
NtRootA1_43910 4801980 .. 4802021 + -18.2  -2.84574   CGCCCCAACTGAGTC GCAGTTAAGCGCGTTTTG ACCGCC CAAAACGCGCTCAGCTGC  TACTTACTTGGGCTA 100 29
NtRootA1_43920 4803882 .. 4803902 +  -6.7  -2.64666   GCGTTTTCGGTACCT            CCTCGCGGC GCC GCCGCTAGC            CCTTTTTGGCTGTCA  48 6
NtRootA1_43930 4805235 .. 4805245 +  -8.2   -2.8474   GCACGAGCAAGCCCT                 GGCG GAT CGCC                 TCGTTGTCCCTCCGA  55 215
NtRootA1_43990 4818418 .. 4818434 +  -5.1  -3.17571   GGTACGGGAGCAGAG              CGAGGTC GGC GACTTTG              TTCCCTTAGAGCATT  49 363
NtRootA1_44000 4819190 .. 4819224 + -22.2  -3.58208   AGCAGTGGTTAAAGT     GGGGAAGCCCCGACCG TGG TGGTCGGGGCTTCCCG     TTAATTGTTGTCCGG 100 59
NtRootA1_44040 NONE
NtRootA1_44050 NONE
        apbE 4830064 .. 4830076 +  -6.2  -3.17723   AAAAGGACCACCGTG                GCGC CGGTT GCGC                TTAACTTGGCGATGC  51 474
        yciI 4831318 .. 4831332 +  -6.4  -4.20516   TCACTGCATAGCCTG               CTGGTT TTC GACCAG               TTTCTTCAATCCGCC  69 57
NtRootA1_44160 4838777 .. 4838788 +  -3.6  -4.08767   ACCTCTACCCGGGAC                CGGT ACCG GCCG                 TTTTACGGCCCTGAC  60 323
NtRootA1_44170 4840343 .. 4840355 +  -6.2  -4.09739   TCGGTCTTCTTCTTG                CCGG CCTTC CCGG                TTTTCGCCGACTTCG  65 465
NtRootA1_44210 NONE
      fadE10 4848751 .. 4848763 +  -4.7  -2.53876   AAAGGCAGGGGCACG                CACCG TCG CGGAG                TCGGTTGAAATCAGG  43 403
NtRootA1_44240 4850297 .. 4850313 +    -5  -3.67877   GGGAACTGCGCAAAT              GCAGCC TTGAT GGCCGC              TGTTTCTTCCACGGT  55 470
NtRootA1_44260 4851683 .. 4851699 +  -5.7  -3.10715   TCGTCTCCCGTTGTG              GGGCCCG CTC TGCGCCC              TTCAATCCTCGTGAA  49 42
NtRootA1_44270 4852994 .. 4853006 +  -6.9  -2.99649   AAAGCTGTGAGATCG                CCGGG AGT TCCGG                TATATATCAAGCTGT  53 87
NtRootA1_44300 4855204 .. 4855227 +  -4.5  -3.50853   GTTGCTGCTCACTGG          CTGTCAGGGC GGCCA GCCC-GGCGG          TTCTCCTTCCGAAAG  53 219
NtRootA1_44310 NONE
NtRootA1_44320 4857195 .. 4857226 +  -7.3  -2.70932   GGATACCTCCGGCTA      CGCTCACGCCCATC TCCGT GGTGTGCGTGA-CG      TACTTAAGGAACAGC  52 478
NtRootA1_44360 NONE
      ansA_2 NONE
        aspA 4861873 .. 4861886 +  -8.1  -2.72144   GCCAGTAAGCCCAGC               GGCTC AAGC GAGCC                ATTTCCGCCCAATGA  54 51
      ansP_3 4863520 .. 4863569 + -34.5  -2.52464   GCCCCAAACAACGCC CGACGGCGGCACCGGGGTTCCGT AACA ACGGAACCTGGGTGCCGCCGTCG TCGGTTAACGAACCC 100 44
      pdhR_3 4864666 .. 4864677 +  -7.2  -2.71144   TTTGGCCACCGTGTT                GGGC AGAC GCCC                 TAGTTCCCGAAAATC  52 321
NtRootA1_44460 NONE
NtRootA1_44470 4870929 .. 4870942 +  -3.7  -3.06302   CGGCATGCAAGGCTT               GCGGC TAAG GCCGG                TTCAGTAGGGGTGCT  45 4
NtRootA1_44510 4874872 .. 4874898 +  -4.4  -3.61421   CGCAATGTCGGTATA         TATCAAGCTGTT TGT GACAGCTGGGTG         GTTTTTCTGTGGTTG  53 82
        ltrA 4877734 .. 4877751 +  -9.1   -4.8622   GGTCCGGTGACGGAG             CCGGTAC GTTC GTGCCGG              TTTTTCGTTGGAACG  93 41
NtRootA1_44550 NONE
NtRootA1_44560 4879346 .. 4879378 +    -2  -3.61398   AAGCTCCGGGAGCAG     GTACGGGTTGACCCT TTGC AGGATCAACTCC-AC      TTCTTCCCGCGGCAC  49 70
NtRootA1_44590 4881737 .. 4881761 +  -3.4  -3.14344   GAACGCGCGGTAGCT          GCCGAACGGC ATGCG GCTGTGCGAC          TTCATGAAAACAGTG  44 251
NtRootA1_44620 4884608 .. 4884632 +  -2.7  -3.40597   GGACGGTTGAAGTTC          TCGTCCTCCTC TAG GAAGAAGTCGA          TCTTTCCCTCCGGCG  47 228
NtRootA1_44670 NONE
NtRootA1_44680 NONE
NtRootA1_44690 4890313 .. 4890337 +  -5.8  -3.56092   ATCCTGGTCCGATTG         GCGAGGT-GCGA AGT TCGCCACCT-GC         TTTCGAACCTCCTCG  57 499
NtRootA1_44730 4892927 .. 4892944 + -10.5  -2.65223   TTGGTGCGTTGAGGG             CGGTGGC AATT GCCGCCG              GTTCTCGTACCATTC  62 175
NtRootA1_44740 4893778 .. 4893796 +  -8.8  -3.05384   CGAATGACCCCGGAA             GACTCCAG GTC CCGGAGTC             TTCGATGGCACGGAG  57 387
NtRootA1_44760 4894940 .. 4894953 +  -5.2  -3.68988   CGTAGTGCCAGCTAC               CGCC CGTGGT GGCG                TTGTATTCGGTGACA  58 309
NtRootA1_44800 4897214 .. 4897246 + -20.6  -3.60151   CGGTTCAACGAACGA      CGGCGGTCGTCCCC TTCGC GGGGACGGTCGCCG      TTCTGCTTTCGCGAG 100 53
      glyA_2 NONE
        soxB NONE
NtRootA1_44870 NONE
        soxA NONE
        soxG NONE
      sdaA_2 NONE
      purU_4 4911100 .. 4911155 + -19.8  -4.24002   TTGCGCGCCCCATTT CGATGGTCCGCTACGCAGTCGACGTAT TAA AT-CGTCGTGTGCGCAGCGGGCCGTCG TTTTGGCGTTTAAGG 100 45
NtRootA1_44930 NONE
NtRootA1_44940 4915278 .. 4915308 + -14.2  -4.16943   GCTGAGATGGCAAAA       GATGACAATCCC ACGGCCC GGGATTGTCATC       TTTTGCCATCTCGGC 100 47
NtRootA1_44980 NONE
NtRootA1_44990 4920605 .. 4920619 +  -5.6  -3.79906   ATCGGCTGGGGCTGG               GGCGGT TTT AACGCC               TTGTTCTAGGGATAG  61 2
NtRootA1_45000 4922495 .. 4922511 +  -2.9  -4.48175   TGGGGTGGGTTCACG              GCGGTTT TCT AAGCCGA              TTTTGGTTGCGTTTT  66 14
NtRootA1_45010 4924093 .. 4924103 +  -8.2  -4.08887   CGCAACGTAGCGCCA                 CGGC TGC GCCG                 TTTACTTTCAGTCCT  71 186
NtRootA1_45020 4925458 .. 4925500 + -11.4  -3.35798   GCCACATTGATCACA CCCAGATCCCTGCC-ACGGT CCAGC GCCGTTGGCAG-GACCTGGG TTATCAGTGCGAAGT  69 188
        rraA 4927304 .. 4927328 + -10.1  -2.73483   ATCAAACAGGCATTA          GGATAGTTACT GAA AGCAACTATCC          TGCTTAAAATCCACT  63 95
NtRootA1_45050 4929042 .. 4929081 +   -23  -4.57569   CGGCTCCTCGAATAC  CAGAAACGGCAGGCGGTC ATCG GACCGCCTGCCGTTATTG   TTTTTGGAGCCATGG 100 48
NtRootA1_45130 NONE
NtRootA1_45140 4939459 .. 4939504 +  -3.1   -2.9732   CACTCCCTAAGGGAC TGACGACGGCACGCGAGTT-TG AGT CGCGACGCACCTGCCGCCGTCG TGCTTTGCGTTCAAG  42 52
NtRootA1_45150 4941214 .. 4941263 + -17.3  -2.75712   ACCTCAGCCCAAGTA AGTCGCATTAGTGCGCGTTTTGA ACGC TCAAAACGCGCACTGCTGCTACG TAGTTGGGTGCCTAC  89 25
NtRootA1_45190 NONE
NtRootA1_45200 NONE
NtRootA1_45210 NONE
NtRootA1_45220 4945983 .. 4946003 + -11.2  -3.57144   ACATCACCGGCTTAA            GCTCCCTT TCCGC AAGGGAGC            TTTCGCCATGCAGGG  74 53
NtRootA1_45230 4946753 .. 4946769 +  -2.1  -2.78384   TGACAGGATCACTGG              CGCCTAC TAC GTCGGCC              TCTGCTAAAGGACAG  39 1
NtRootA1_45240 4947256 .. 4947311 + -14.8  -3.74693   TGGGTCTACCTTGAC GCTCGTGCATGTGTGTCCCACCGGT CCGCTAT GCCGGTGGGACACGCTTGCA-GGCC TTTGCTCAGATGACC  95 168
NtRootA1_45250 4949108 .. 4949148 + -26.4  -4.38927   GTAGAGCGGTATAGC CG-TCGACGTCGGCACCCA AGGC TGGGTGCCGACGTCGAACG  TTTCTTATGTGAGAG 100 160
NtRootA1_45290 NONE
NtRootA1_45300 4955807 .. 4955830 +  -6.6  -3.09505   GAGGAGCTCGCCGTT          GAACGGTTCG CCGC CGAACCGCAC           TGTTGCCTGCACTCT  51 512
NtRootA1_45390 NONE
NtRootA1_45400 NONE
NtRootA1_45410 NONE
NtRootA1_45420 4970218 .. 4970239 +  -2.9  -3.77832   CGTATTCGTACGACG           GCGGCG-CCA GCC TGGATGCCCC           TTGTTGGGTTTGCGA  52 42
NtRootA1_45430 4970722 .. 4970777 +    -9  -3.14944   TAGGTGCAGCTCTCC GGAGTCCGG-TCCGGC-CGCCATC GTCGAAATTG GGTGGTGTGCCGGAACCGGTCGCC TTCCATGTAGTCATA  61 180
NtRootA1_45450 4972028 .. 4972043 +    -4  -3.83502   GAAGGCGTCCCGCCC              GTTACA TTAA TGTGAC               TTTAGTATGGCGCTC  57 56
NtRootA1_45500 4976501 .. 4976540 +   -31   -3.6106   GGTGACAAGTCGCTG  GCCCGCTATCCCGTTGCT GCCC AGCAACGGGATAGCGGGC   TTTGCACGTGTTGGG 100 57
NtRootA1_45540 4980410 .. 4980420 +  -5.4  -3.05384   CAAATAAGCATTCCC                 GTTC CCT GAAC                 TTCCCTAAAACAGCG  49 34
NtRootA1_45550 4980925 .. 4980948 +   -16  -3.55444   GTGCGGACGTGACTG          CCGGGCCTGC CTGA GCAGGTCCGG           TTTAGGAACTCAGGG  90 12
NtRootA1_45620 4989721 .. 4989770 + -18.7  -2.64981   AGTTTCTTCGCTCTC CCTGCCCCTGCTCCCGCGCCTGC CACTTC GCAG-TGTGGG-GCGGGGGCAGG TGCGTTTCCGGGTGT  95 39
NtRootA1_45630 4991012 .. 4991070 +  -4.6  -4.56597   ACACTTCTCCGATTT GGCGGCGATGCAAGGC-G-GTGAGTTTCTC CAG GGGAAGCTCGCGCTGCCC-GGG-CGCCGCC TTTTTGCCGAGCACG  74 277
        avtA NONE
NtRootA1_45680 4995218 .. 4995241 +   -16  -4.18697   GAGCTGAATCACGCC          GCCGGGTGGG GAGC CTCACCCGGC           TTTTGGCCTGATTTT 100 44
NtRootA1_45690 4996097 .. 4996118 +  -2.3  -3.29144   GGCCGCTGCCGGCGG           TCGCTGA-CA TGA TGATCGGTGA           TTCTGCCCAGCCTGA  45 439
NtRootA1_45750 5002291 .. 5002301 +  -2.4  -4.82901   GAAGATTGGGGTTCC                 GCAG GCC CGGC                 TTTTTGTCCGGCACG  74 244
NtRootA1_45780 5005480 .. 5005524 +  -8.5  -3.57561   GTAGCAACAAACGCT TGACG-ACGGCGGACCAGGGC TGGAT GCCTCGGCCCGCCGTTCG-CG TTTAAGGCCTTAAGG  66 37
NtRootA1_45790 5006448 .. 5006461 +  -2.3  -3.18681   CGCGCAGGAAACACG               GCGGT AACC ACGGC                TTCCTAGGCTTAAGA  44 127
NtRootA1_45800 NONE
NtRootA1_45810 5007537 .. 5007548 +  -7.2  -3.92522   GAGGACTGAACCACG                CGCC GTCG GGCG                 TTTATACCGTTGAAC  66 32
NtRootA1_45820 5008140 .. 5008157 + -10.5  -2.74322   TGAAGGCGTTCACGC             CGGCTGG CTTG CCGGCCG              CTTTGGCAGCTTCAA  60 180
NtRootA1_45890 5015475 .. 5015505 +  -6.1  -3.14211   ATCTACGTGAAGGCT      CGCCCCTG-CAAGT CAGG GCTTGGCCGGGGTG       TTGGTCGCGGGCCCT  52 107
NtRootA1_45910 5016406 .. 5016437 +  -3.6  -4.22346   AGCGTTGCTGTTGTA      GTACTACGGTCCGG CCCC TTGGACAGGAGTGC       TTTTGGCTGCATTTA  62 133
NtRootA1_45920 NONE
NtRootA1_45930 5017167 .. 5017208 + -21.7  -3.55548   CAGGGTCCTGAACAC ACAAGAACCCGGAGACTGC AGTT GCAGCCTCCGGGTTCTTGC  TTTGCCCCACTCTTG 100 55
NtRootA1_45940 5018265 .. 5018299 + -15.1  -2.52543   GATATTCACGGGTAA    GAACCCGGAGGACTGC CTCG GCAGAC-TCCGGGTTC     TCCGTTGCCAGGGCT  81 42
NtRootA1_46000 NONE
NtRootA1_46020 5026119 .. 5026130 +    -3  -2.90714   TCCTGTTCACTTCGT                TGAA TTTG TTCA                 TATGTGGCGATTTCA  42 49
NtRootA1_46030 5027504 .. 5027540 +  -2.7  -3.55444   ACTCAAGCAGAACGG    CCTCTCCGTCAAGGAGT AGG GCCCTACGACGGGGTGG    TTTCGGGGATCCCGG  47 7
NtRootA1_46040 NONE
NtRootA1_46050 NONE
NtRootA1_46060 5030468 .. 5030482 +  -4.2  -2.91199   CGCCTCACCACATAC               CAAGTC CGT GACATG               TGTCATTCCCCATTA  44 43
NtRootA1_46070 5033290 .. 5033303 +  -2.3  -3.02511   GAACGCGTAGCGAAC               TCGCG CCGT CGCAA                TGTTGCGCAGATCAC  41 123
NtRootA1_46080 NONE
NtRootA1_46090 5034416 .. 5034438 +  -3.2  -4.07246   CGCTTGTCCTCGCCA           TGCTTGACCC GCC GGGCCACGCC           TTTGCTTTCGAGTCG  58 230
NtRootA1_46110 5036328 .. 5036341 +  -2.3  -2.78816   AACTGGGCGATCGGG               GCGAT GAGG AACGC                TGTAATGGGCGCTGC  39 318
NtRootA1_46130 5038866 .. 5038895 + -12.8  -4.11216   GCGCAACACAAGAAA       CGCGCGACGCCG ACCTAC CGCCGTCGTGCG        TTTTGCCCCTCAGGC  93 45
NtRootA1_46160 5041436 .. 5041465 + -20.8  -4.43477   ACCAACCGCAACAAG       CGTCCGACGGCG ACCTCC CGCCGTCGGACG        TTTTCCTTACGTGAC 100 42
NtRootA1_46170 NONE
NtRootA1_46180 5042497 .. 5042526 +  -4.9  -3.57309   CAAAACCTGTTGACG       GTTGGGCATGGCGC CAC GCCCCAGGC-CGAC       TTTGAAGAGCTTTTG  53 61
NtRootA1_46190 5043021 .. 5043060 +    -7   -3.2614   GTCAGTGGGTTAGGT  CAGCGGAGTTGGGCTAGCG GGC CTCAAGCC-GGCTCCGCAG  TTGCTGTGCGAAGTC  56 28
NtRootA1_46210 5043985 .. 5044029 + -20.9  -2.52464   GGAAGCGCCGCTTTA G-CAGAAACGCACGACGGCG ACCTTC CGCCGTCGTGCGTTTCCGTC TGCCTTGGAAGAAGC 100 25
NtRootA1_46240 5047798 .. 5047827 + -20.7  -4.09864   GGCTGGCTGGATAAA       GGCCCGACGGCGG CCTC CCGCCGTCGGGCG        TTTTCACCCCTCAGT 100 334
NtRootA1_46270 NONE
NtRootA1_46280 5050884 .. 5050914 +  -8.3  -3.58037   TCTTGAAACCCGTCC      CG-TGGTG-GCGCAC GTT GTGCGCACCCCAGCG      TTTCCGGAATTCATC  65 210
NtRootA1_46300 5052279 .. 5052289 +  -4.6  -3.54638   GACCCTCTATTCTCT                 TGCC ATG GGCG                 TTTGGGGAGCGTTGT  53 80
NtRootA1_46310 NONE
NtRootA1_46320 5053573 .. 5053586 +  -3.8  -4.24342   CCTAATAATGTCAGA               CCCT GGTGAG AGGG                TTTATTCATGGGAAG  62 180
NtRootA1_46330 5055783 .. 5055796 +  -5.2  -3.19157   CGAGGTCCAACGTGC               GCCC GCTTGA GGGC                TTACTGGCGTTGCTC  51 76
NtRootA1_46360 5058019 .. 5058029 +  -4.6  -3.73783   GTTCCTCTGCCTGAC                 GCCG CAA TGGC                 TTCTTCCATTCAATG  56 69
NtRootA1_46370 5059507 .. 5059528 +    -5  -3.06696   CCCAACAGCTGCGGT           CCGGCCGC ATAGCA GCGATCGG            TGTGTTGCCGGAGAG  47 116
NtRootA1_46400 5060753 .. 5060771 +  -6.7  -4.39877   AGGGGGGCGCCCGAC            CAG-GCCC GGCG GGGCTCTG             TTTGTTGATTCTTAG  72 125
NtRootA1_46420 NONE
NtRootA1_46430 5064951 .. 5064964 +  -3.7  -3.33696   ACGCCAAGGATCATG               CCCGC ACTG GCGAG                TTCGTTGGCGAAAAA  48 443
      speB_2 NONE
NtRootA1_46620 NONE
         prr NONE
NtRootA1_46640 5090739 .. 5090783 +  -4.2  -2.65504   AGGCTAGCCGGCCAT CCCGG-CGAA-TGCCCCGGAGC CAC GCTCCGGGGCACTTCAACCACC CATTTTTGATGAGGG  42 34
NtRootA1_46650 NONE
NtRootA1_46660 NONE
NtRootA1_46670 NONE
NtRootA1_46680 5095096 .. 5095110 +  -7.8  -2.73635   GCCCAGGCGACCGGC               GGCTGT CTC GCAGCC               CTTTGACACCCTTTC  54 41
NtRootA1_46690 5095704 .. 5095734 + -17.7  -4.39571   CGGTTGCATCGCATA       GTCCGGTGTTCTC CCCGC GAGAACACCGGGC       TTTTGCGTTTCTGAC 100 81
NtRootA1_46700 5096766 .. 5096791 + -14.1  -4.30441   TGGGCACTCGGGAAA         CCCGGCA-TTCC CTT GGAAGTGCCGGG         TTTTCGCTGTTGTAG 100 58
NtRootA1_46710 NONE
NtRootA1_46720 NONE
NtRootA1_46730 5100113 .. 5100128 +  -3.2  -2.73771   CTTCCAAGAACAAGG              AGGACA ACGA TGTCCC               ATTTCCCCGATCTCG  41 43
         dht NONE
NtRootA1_46750 5102356 .. 5102394 + -13.9  -4.63218   TCCGTGATGCAGAAT  GGGG-CTGGTGCCACCCG GATG TGGGTGTTACCAGTCCCC   TTTTCTTGGCGCCGA 100 76
NtRootA1_46810 5106977 .. 5107019 + -11.4  -4.15106   TAACGCGCTAGCCCC TCGG-GTG-GGGTCGCCCAT GCCCG GTGGGCGACCCTCACCCCCA TTTTCCGCGTTGGTC  88 30
NtRootA1_46820 5107766 .. 5107789 + -15.2  -3.14132   GTGCAATGCTACTCA          GCGCGGCGGC GCAG GCGGCCGCGC           TTCCTAAGCGCGGAG  85 301
NtRootA1_46850 5109284 .. 5109308 + -18.6  -3.53031   AGAACACGCACGACG          GCGGCAGGCG GCTTA CGCCTGCCGC          TTCCTTTGGACTGGG 100 63
NtRootA1_46860 5110473 .. 5110485 +  -9.1  -2.71712   GCCGGGAGATTTGGG                TCCCG GTA CGGGA                ATTTGCGCCACAGGG  57 209
NtRootA1_46950 NONE
NtRootA1_46960 5120696 .. 5120706 +  -3.2  -3.14132   GAGATCGCGTTGGCC                 GTTG CGA CGAC                 TTCCTGCCGCACGGA  44 123
NtRootA1_47090 5133674 .. 5133727 + -19.7  -3.34517   CGGAGGCCCGCCGTC GCCGAAATCGCCGGAAAACGTCCAG TTCG CTGGAAGTTTCCCGGCGATTTCGCA TGTTTCCGGCGAACT 100 58
NtRootA1_47110 5137371 .. 5137389 +  -3.8  -3.53012   GCTGGCTGATGCTTC            CCGC-GC CCGGCC GCTGCGG             TTTCCAACCACGACG  51 380
NtRootA1_47150 5142344 .. 5142366 + -14.2  -3.18264   CCTTGGCTTTGGGGT           GACGGGCATA CTT TGTGCCCGTC           TTCCTGGATCCAGGG  86 53
NtRootA1_47170 5145515 .. 5145548 +  -6.7  -3.95584   ACGGCAGACCAGCTC     GGTGGGGTACTGGGTG GTT CCCTCAGT-CTTCACC     TTTGCTTCGTCCAGC  66 289
NtRootA1_47190 5145902 .. 5145916 +  -4.2  -3.14132   TTGTGTGACGTTCGG               TGGCGA TGC TTGCCG               TTGGTCGCCCAACAA  45 73
NtRootA1_47200 NONE
NtRootA1_47210 NONE
NtRootA1_47220 5149277 .. 5149298 +  -4.4  -3.10493   AAATGCTTGGGGATT           GTGCCTTC CACTGT GAAAGCAC            TCTGTGTATTACACC  47 78
NtRootA1_47230 NONE
NtRootA1_47240 5151434 .. 5151446 +  -4.1  -5.26875   TGTAATGAACCCGGG                CTGTC CTG GATAG                TTTTTTGCTTCGGGG  84 47
NtRootA1_47250 NONE
NtRootA1_47260 NONE
NtRootA1_47270 5153889 .. 5153902 +  -2.3  -2.77899   GGCGGGTGGATGCCC               GCGGA TTCC TCAGC                TGATTCGTGGGGGCC  39 9
      bacC_3 5154690 .. 5154702 +  -6.2  -3.85698   TACTGCCCGTCGACG                GCGG CTACA CCGC                TTTCTAAACAGCACA  64 6
NtRootA1_47290 NONE
NtRootA1_47300 5157186 .. 5157202 +  -3.6  -3.18383   GCTTTGTCCGCGAAA              CAGCCG ACAGC CTGCTG              TTCATGAATGCAGAT  47 85
NtRootA1_47310 NONE
NtRootA1_47320 5159167 .. 5159183 +  -3.7   -4.0641   TCCCAATCCTGCACC              GTCAG CACCCCA CTGAC              TTTGTCTGGATGAGG  61 109
NtRootA1_47340 NONE
NtRootA1_47350 NONE
NtRootA1_47360 5163065 .. 5163103 + -18.4  -3.81557   ACCTGCTCAAAGACC  GCTCCGGAGTGCG-TAT CCCCCA ATAACGCACTCCGGAGC   TCTTTGTTTAACCGG 100 117
NtRootA1_47420 NONE
NtRootA1_47430 NONE
NtRootA1_47440 5170658 .. 5170695 +   -25  -4.12532   TTTGCGCCACGCTAA   CGGGCTGGCGACACCT AAATCC GGGTGTCGCCAGCCCG    TTTCTGTGTCCCCAG 100 59
NtRootA1_47460 5172239 .. 5172277 +  -2.2  -3.91897   CGAACCCGAAGACCA   GGACGATCGCAGCTATGG TGA CGATTGCCGCCGTCGTGC   TTTGTGGGTCAAGGC  54 404
NtRootA1_47480 NONE
NtRootA1_47490 NONE
NtRootA1_47500 5177278 .. 5177315 + -30.1  -3.68351   GACCCCGTAGTTAAA   GCTCGACGTCGGCACTC AGGT GAGTGCCGACGTCGAGC    TTTAACTGGTGGCGA 100 39
NtRootA1_47520 5179847 .. 5179863 + -10.9  -3.74693   TCGGGCGCCCTGGAA              TCAGCTC TGG GAGCTGA              TTTGGTCCGGTCAGG  78 83
NtRootA1_47540 5182643 .. 5182680 + -27.1  -3.73072   AGACCGAATAGAAGC   CCCCGACGTCGGCACCC GCGT GAGTGCCGACGTCGGGG    TTTGGTGGGGCGGTT 100 30
NtRootA1_47630 5192095 .. 5192113 +  -8.8  -4.37092   ACAGCCGAGCATTAG             TGGCCCGA CTC TCGGGCGA             TTTTCTGGGCAAAAT  81 40
NtRootA1_47660 NONE
NtRootA1_47670 5196153 .. 5196167 +   -10  -2.73701   CTTCCATCGAGAAGA               TACCCC CAG GGGGTA               CTTGATTTGATACCC  63 41
NtRootA1_47680 NONE
NtRootA1_47690 NONE
NtRootA1_47700 5199395 .. 5199436 + -13.8  -3.75332   TCGGTAAATAACCAG GGTCCGGGCTAAGCGGTTCCG AAA CGGA-CCGC--GGCCCGGGCC TTTGCCTTGGCCGCT  88 30
NtRootA1_47720 5200105 .. 5200143 + -24.7  -3.10597   CCAACTAAGACAGTT   GGGAATGGCCCGGACGC ACACA GCGTCCGGGCCATTCGC   CTTTTAAGTCGGAAC 100 33
NtRootA1_47740 5202019 .. 5202047 +  -7.5  -4.50058   TGGAACTGAGATTGA       CGCCGGAGC-CCT TGCCC AGGTGCT-CGGCG       TTTTCCTTGTGGCTC  81 128
NtRootA1_47780 5204915 .. 5204940 +  -7.7  -2.87564   TTAATTAGTTGACTC         TTCAACTTATC TCGG GAAAAGTTGAA          TATATGAACAAGTCC  56 37
NtRootA1_47790 5205416 .. 5205462 + -31.3  -3.59262   CTAATAGCCTTTTGA GCCGGATGTTCTCTCACTTTC GTCAA GAAAGTGAGAGAACATCCGGC TTTAGGCCTCTGGAA 100 63
NtRootA1_47810 NONE
NtRootA1_47820 5207853 .. 5207880 +  -3.2  -4.05788   ACAGCTTGGTCGAGT        CCGAACTCATCG ACGC CGGCGTGCTCGG         TTTCGTTTCCCACAC  58 128
NtRootA1_47840 NONE
NtRootA1_47850 NONE
NtRootA1_47860 5209760 .. 5209773 +  -3.7  -3.40371   ATGACCGGTGCCCGC               GCCCG TCTC CTGGC                TTGGTTCGTCGCCTC  49 114
NtRootA1_47870 5210717 .. 5210733 +  -9.4  -4.11183   ATGAGGATGTCGGCC              TCGCCG GCTCG CGGCGA              TTCTTTGTCATACAC  79 170
NtRootA1_47890 5213087 .. 5213099 +  -3.3  -3.88291   CGGCTCTGACAACGC                CATGG ATT CCTTG                TTTGTCCCGCTCGTG  55 32
NtRootA1_47900 5213693 .. 5213703 +  -5.4  -4.01101   CGAACAGTTCTCCCA                 GGAA TCC TTCC                 TTCTTCTTCCGTTTA  64 55
NtRootA1_47950 NONE
NtRootA1_47960 NONE
NtRootA1_47970 NONE
NtRootA1_47980 5220412 .. 5220452 +  -3.7  -3.60792   GCTCTAGCTTGGCTT  CCCCGCCCCGCCTGCCG CCATCAA CTCCAGGCGACGCAGGG  TTTCGCGGTTGCGGA  51 80
NtRootA1_48000 5221935 .. 5221953 +    -3  -3.17723   TTCCACCCTGACTTT             GACATTGG CTT CCACCGTC             TTCACTTCACCGTCC  44 128
NtRootA1_48040 5225031 .. 5225065 + -22.8  -3.63515   TCCTCATAAGCAAAA     GGACCCCCACCACCGG AAA CCGGCGGCGGGGGTCC     TTCTTAGCAGTCAGA 100 32
NtRootA1_48090 5228065 .. 5228078 +  -2.3  -2.73364   AGTTCCCGGCGGCGC               GCCCA GGCG TAGGC                TACTTGCCATGAAGC  39 62
NtRootA1_48100 5228802 .. 5228814 +  -4.1  -2.70932   CGGGAACATCCACAT                CTTGA GGT TCAGG                TCCTTGGCGGCCGCG  42 318
NtRootA1_48140 NONE
NtRootA1_48150 NONE
NtRootA1_48160 5234929 .. 5234945 +  -2.9  -2.71011   CAGCAGGCCCGCCGA              CGCCAAT GAA GTTGACG              TCCTTGAGCAGGGCT  40 300
NtRootA1_48240 5243518 .. 5243548 +  -3.1  -2.74012   CGCGACGTAGCCAAT      CGTGGAGACCACGG AAAC CCG-GGCCGCTGCG       TGCTTGGGATCGTCG  41 120
NtRootA1_48290 5248884 .. 5248898 +  -9.2  -3.65351   AGGGAGAGGACGATG               GCGGCG CGC TGCCGC               TTTCCGTGGGCGTCG  68 353
NtRootA1_48330 NONE
NtRootA1_48340 5254585 .. 5254640 + -18.5  -3.05384   GTCCACCCTGCCCAA CTAGGTCGCAGTAGAGCGCGTTTTG AGCGTC CAGAACGCGCTTAACTGCTACTTAG TTGGGTGAGCCGAGC 100 22
NtRootA1_48360 5256006 .. 5256017 +  -3.6  -3.01712   AAGCGGCCAGTTCAG                CCGC CGTC GTGG                 TCTTCGAGGCAACCA  43 307
NtRootA1_48420 NONE
NtRootA1_48430 NONE
NtRootA1_48440 5266508 .. 5266518 +  -5.4  -3.34398   TTTGAGGGTCCCCAA                 TTCC AAC GGAA                 TATTTGGAACGCAAC  53 225
      trxB_3 NONE
        trxA 5267942 .. 5267981 + -23.6  -3.77832   GTTAGTCAGTGAAAA  GCCGGCGGCTGTCGCTCC TGAA GGAGTGGGAGCCGCCGGC   TTCTTGCATTTAGCC 100 50
NtRootA1_48470 NONE
NtRootA1_48480 5273902 .. 5273929 +  -8.4  -3.60296   CGACGACGCCAAGTA        GTCCAGCCGCTCG TGC CGGGC-GTTGGGC        TTTGGAATAGCACTC  65 316
        rpmH 5279157 .. 5279185 - -21.1  -3.44443   CGTATATAACACTAA        GTTCCGGCGTCCA TTG CGGACGCCGGAAC        GTACAGTTGTTGAAA 100 122
NtRootA1_48550 NONE
NtRootA1_48540 NONE
NtRootA1_48530 NONE
NtRootA1_48520 NONE
        rsmG 5276204 .. 5276219 -  -7.5  -2.63715   ACCGAGCGGAGACTA              GCCCG TCTTTC CGGGC               TTGTTGACGATGATC  50 7
NtRootA1_48500 5275014 .. 5275030 -  -5.7  -3.08679   CCCTCCGATGGAATA              GCCGAGC GCG GACCGGC              CCAGGCTGTTGCAGT  49 53
NtRootA1_48490 5273711 .. 5273736 - -11.9  -5.55769   CTCCAGAACAAAAAA         TGGGGTCTGCC ACAA AGCAAACCCCA          TTCCGTTGGACCGGA 100 44
NtRootA1_48410 NONE
NtRootA1_48400 5259275 .. 5259293 - -11.7  -2.57931   CTGACCGCTCAGAAT             GCCACCC TTGAC GGGTGGC             CATGAAGACCGCCGG  69 343
NtRootA1_48390 5258768 .. 5258805 - -15.5  -4.21462   ACTGACCAGTTAAAA   GGGGGGAAGCCCACGCG TTGC CGCGTGGGCTTCCTGCG    GTTCAGCATGCATCT 100 78
NtRootA1_48380 5257179 .. 5257199 -  -6.1  -2.61548   TGGGACCAGAACCGA            CGACGGC GACATCA GCCATCG            CTACCCACCTCCAAC  48 16
NtRootA1_48370 5255495 .. 5255515 -  -8.2   -2.5409   ACAAGGCCGAAGCCA            CCACCGCC GCGAA GGCGCTGG            AAGCCGTCAAGCAGA  53 259
NtRootA1_48350 5254600 .. 5254625 -  -9.7  -2.78816   CTAGGTCGCAGTAGA         GCGCGTTTTGA GCGT CCAGAACGCGC          TTAACTGCTACTTAG  61 37
NtRootA1_48320 NONE
NtRootA1_48310 5250587 .. 5250598 -  -3.6  -3.40403   TCGTCGCGACCACAA                CGCG GACC CGCA                 CCACGCCAGGTCCTC  49 76
NtRootA1_48300 5248506 .. 5248516 -  -6.8  -2.70298   TCCGCCAACCACAAC                 GCAC TGC GTGC                 TGCTTTCCATAGCTT  50 49
NtRootA1_48280 5247189 .. 5247202 -  -8.1  -3.12668   CCGGAAACGTCAATA               TGGGC CACC GCCCA                ATCTTCCCACGGCCA  57 87
NtRootA1_48270 5245444 .. 5245482 - -21.9  -3.55761   CATCCACCCCTTAAA   CCCCCGATGCTCTCTCA TCAAC TGAGAGAGCATCGGGCG   AAAAGGGCAACGATG 100 57
      fruR_2 NONE
NtRootA1_48250 NONE
NtRootA1_48230 5241071 .. 5241086 -    -4  -3.65902   CGGAGGGCACGGAAA              TCGCCTG TCT CAGG-GA              TGATTCAGGGTCCAG  54 65
NtRootA1_48220 NONE
NtRootA1_48210 5239195 .. 5239213 -  -3.1  -2.87344   TAGGGGGCCTAGACA             TCCCGCT TCTTC AACAGGA             CCATTGCCAAGGCAA  42 0
NtRootA1_48200 NONE
NtRootA1_48190 NONE
        mmuP 5235522 .. 5235563 - -23.9  -4.32034   GCAGGACGATGAAAA GGCTGCACGGCCGGACTCTC TCT GA-AGTCCGGCCGTGGAGCC CTGTGCTGGATTGAT 100 40
        pcaR 5234224 .. 5234242 -  -5.2  -2.74523   TCAGCGGCAACAGTA             CGGTCACC ATC GGTGAACA             AGTGCCTGCCAGCGC  44 449
NtRootA1_48130 NONE
NtRootA1_48120 5230149 .. 5230182 -  -4.6  -3.87538   AAAGTATGATAATAA     GCATCCAAAGTTTC CCCTGC GAAACATTGGAAAC      GCTCTTGAAATGAGT  59 71
      gabP_2 5228518 .. 5228556 -   -29  -4.13654   GCCTTAAACCACAAA   CGGGGCAGCCGCCGTC GAACGCT GACGGCGGCTGCCCCG   GACGAAAAGGACGCT 100 40
NtRootA1_t00570 5227112 .. 5227140 - -21.9  -4.62168   ATGGAAACGACAAAA        CCCCTGGAAGATC AGC GATCTTCCAGGGG        TTTCCTGTGCGCGGA 100 32
        rpsF 5226574 .. 5226585 -  -5.8  -2.51464   TGATTACTCAGCAAC                GACC TTCT GGTC                 TTCGGGGCGGATGAT  45 2
NtRootA1_48070 NONE
        rpsR NONE
        rplI 5225031 .. 5225065 - -27.2  -4.48987   TCCTCATAAGCAAAA     GGACCCCCACCACCGG AAA CCGGCGGCGGGGGTCC     TTCTTAGCAGTCAGA 100 43
NtRootA1_48030 5223695 .. 5223709 -  -7.8  -3.35679   CGGTTGGAGCTACAA               CAGGAC AGT GCCCTG               GATACACGTGGCCGA  61 5
NtRootA1_48020 5222790 .. 5222806 -  -2.1  -2.64912   TGCGGAATGCATAAT              GTGCTCC TTG GGTGTAC              GCCCGTTTGGTTACT  38 62
NtRootA1_48010 5221700 .. 5221720 -  -3.9  -3.40403   GGTGGCCGAGGACAA            GGTGGGAAC GCT GTTGCCACT            AAGGATTTCGGTGGG  51 192
NtRootA1_47990 5219898 .. 5219912 -  -9.2  -2.72344   CGCGATCGCCAATGA               CCCCCG GGC CGAGGG               CACCACGGACATCGT  57 513
NtRootA1_47940 NONE
NtRootA1_47930 5214827 .. 5214841 -  -2.1  -3.67792   GCATATGCATCTAAA               TCACT GAACG AGCGA               GCATCACAAACTATT  51 56
NtRootA1_47920 5214090 .. 5214104 -  -5.6   -3.8698   GAACTGAAATTCAAA               GAGCTG GAA CCGCTC               GATTCATTTCCGGGT  61 72
NtRootA1_47910 5213241 .. 5213256 -  -3.2   -3.9122   CAGCTGGCCAAAGAA              TCGGCT GCGA AGCTGA               ACGAGGAACAACATA  56 439
NtRootA1_47880 5210176 .. 5210213 -  -5.4  -3.57561   CTTCAACGGCGCAAA   CCCCTTCGGCTGGGCAG CGGTT CTGACC-GCCGTCGGGA   TGGGACCGTACGAAG  55 405
NtRootA1_47830 5207354 .. 5207379 -  -9.7  -4.30987   AGGCCGCACAACAAA         GACTCGATCGG CTTA CCGATCGACCC          AATCCGAACCTCGGT  83 408
NtRootA1_47800 5205361 .. 5205378 -  -3.3   -3.6682   CGGCAGGGATCCAAA             CTCCGCG TCCT CGCGTAA              GCGCTCCCATACCCT  52 169
NtRootA1_47770 NONE
NtRootA1_47760 5202326 .. 5202344 -  -7.5  -4.07568   CCGCCGGTTGCAAAA             GTTCTAC AGAGA GTAGAAC             GTCCAGCTACTAGTT  68 35
NtRootA1_47750 5201611 .. 5201628 -  -3.3  -4.17958   AAGACCGTGAACAAA             CTGCTCA TAGA CGCGCAG              GCACTCCCGCAACTC  61 324
NtRootA1_47730 5200103 .. 5200145 - -17.7  -2.50699   TTCCAACTAAGACAG TTGGGAATGGCCCGGACGC ACACA GCGTCCGGGCCATTCGCCT TTTAAGTCGGAACCC  87 124
NtRootA1_47710 5198935 .. 5198948 -  -3.7  -2.60763   CTGACAGGTGATAAC               GCTGC CGTG GCCGC                CCAAGTAGCTGCCGC  41 480
NtRootA1_47650 NONE
NtRootA1_47640 5192074 .. 5192112 -  -4.4  -3.74526   CGAGGAATTGAAGAA   GGCCTGACAGCCGAGC ATTAGTG GCCCGACTCTCGGGCG   ATTTTCTGGGCAAAA  56 4
NtRootA1_47620 5191076 .. 5191119 -  -6.9  -5.79595   CTGTAAAACAAAAAA TGGGCA-GA-TTGAGACCTCC AACA GGAAGTCTCAATTCTTACCCT GTGCCAGTGATTCTA 100 132
NtRootA1_47610 NONE
      glpK_2 NONE
        glpA NONE
NtRootA1_47580 5184813 .. 5184827 -  -4.9  -3.38046   GGCGCACGCTAAAGA               CCCAG TTTGC CCGGG               TTCAGAAGGTTTTTG  51 4
NtRootA1_47570 NONE
NtRootA1_47560 NONE
NtRootA1_47550 5182641 .. 5182682 - -22.3  -3.70446   CGAGACCGAATAGAA GCCCCCGACGTCGGCACCC GCGT GAGTGCCGACGTCGGGGTT  TGGTGGGGCGGTTTG 100 47
NtRootA1_47530 5179355 .. 5179370 -  -3.2  -3.06915   ATGTACTCGACCGAA              CTTTCG GCTG CGGAAG               TAGCCATCGCCGAGC  43 479
NtRootA1_47510 5177278 .. 5177315 - -30.1   -3.6502   GACCCCGTAGTTAAA   GCTCGACGTCGGCACTC AGGT GAGTGCCGACGTCGAGC    TTTAACTGGTGGCGA 100 27
NtRootA1_47470 5171581 .. 5171595 -  -2.8  -2.84325   CGGCCTCAAAGATGA               GGTG GTCCGGT CACC               AACTGTGACGGCGGG  42 388
NtRootA1_47450 5170525 .. 5170551 -  -4.3  -3.30124   GTTCATCCGCGAGAA        CGTGCCCAGCGG TTTG CTGCCGAGC-CG         CACCACCGTGTTTGT  48 224
NtRootA1_47410 5168327 .. 5168337 -  -5.4  -3.01712   TGGGGCTGTTCAATA                 TGAG ATT CTCA                 TTTGCGTTGCGTATT  48 144
NtRootA1_47400 NONE
NtRootA1_47390 NONE
         eda NONE
NtRootA1_47370 5163168 .. 5163206 - -20.4  -3.64703   TCTTTGGCACGCAAA   CAGTCCCGACACGCCG TCTCTCT CGGCATGTCGGGACCG   CTTTGCTTTCAAAGT 100 58
NtRootA1_47330 5158609 .. 5158626 -  -6.9  -3.57263   AGGGCTAGTGGTAAA             GGTCCCC TTCC GGGGATC              CTTCGTCGTAGAAGT  59 517
NtRootA1_47180 5145204 .. 5145262 - -21.7  -2.75066   AAGAACGCGGTAAAT GACCCGCGCCGCGACGAACACGA-CGGC GAGA GCCGCCCCTGCGCGTAGCGGCGCGGATC GGAAGGTCATGCCGT 100 32
NtRootA1_47160 5142179 .. 5142193 -  -2.8  -3.12351   TGCCCGGACATGGAA               GACC GCCGCAA GGTC               ACGGAGCTGCTGAAA  44 138
NtRootA1_47140 NONE
NtRootA1_47130 NONE
        cysO 5136919 .. 5136939 -    -6  -3.72893   GACGGGTTCAGGAAA            CAGCGCCG GGAAT CGGCGTCG            TCTGGATCATGGACC  60 129
NtRootA1_47100 5133681 .. 5133720 - -21.6  -3.53012   CCGCCGTCGCCGAAA  TCGCCGGAAAACGTCCAG TTCG CTGGAAGTTTCCCGGCGA   TTTCGCATGTTTCCG 100 71
NtRootA1_47080 5131300 .. 5131325 - -10.5  -3.06183   CTGAGTCGCACTTAA         GCGCGTTTTGA GCGG TGAAAACGCGC          ACTATTGCGACCTAG  66 46
      aroE_2 NONE
NtRootA1_47060 NONE
        pcaH NONE
        pcaG 5126714 .. 5126725 -  -7.2  -3.40403   CTTCCTCGAGGACAA                CCGC CCAG GCGG                 CTTCGACGTCGAGGA  58 128
NtRootA1_47030 NONE
NtRootA1_47020 5124603 .. 5124613 -  -2.4  -3.61232   CTCGGGAGATAAAGA                 GGTC ATC GTCC                 GTTCTCCTTCATAAA  47 17
        pcaC 5124123 .. 5124170 - -17.1  -2.52464   TGCTTGCCCAACTGA GTCGCAGTTGTGCGCGTTTTG AGGGGG CTAAACGCGCACTAATGCGAC CTAGTTGGGTTCGTT  85 26
      fadA_2 NONE
        pcaI NONE
        catJ NONE
NtRootA1_46970 5120280 .. 5120293 -  -3.7  -4.21812   CGTCAGCGAAAACAA               CCGGC AGAT GCTGG                AGCGGATCGTTGACA  63 388
NtRootA1_46940 NONE
NtRootA1_46930 NONE
        tesB NONE
       acs_2 NONE
NtRootA1_46900 5113232 .. 5113259 -  -3.2  -2.50816   GTTCCAGTTAGTAAC        CGGTGCGGCGGC CATG GCTACTTCACCG         ACGCAGATGCAGTGG  39 15
NtRootA1_46890 NONE
NtRootA1_46880 5111348 .. 5111406 - -14.7  -3.60296   CATCGTGAGGTCAAA CG-GATGGCAGTTAGCCCCATTGCCAAG GCAG CTCGACATTAGGGCTAACTGCTGTCTCG TCGGAGTTAATCAAC  88 32
      paaX_3 5110036 .. 5110046 -  -8.2  -3.08133   GATTCATTTACGCAA                 CCGC CAA GCGG                 GCCTCCGATGGCCGC  57 301
NtRootA1_46840 NONE
NtRootA1_46830 5107338 .. 5107353 -    -9  -2.52896   GGACCTGCCAACCCA              GGGACT GGAG AGTCCC               AACCGCAGGAACAAA  56 179
        pntA NONE
NtRootA1_46790 NONE
        pntB 5103141 .. 5103153 -  -4.1  -2.52464   TCGTCTTGCAATCGA                TGACT CCT AGCCA                TGCATCCTTCCGCAG  41 135
NtRootA1_46770 NONE
NtRootA1_46760 5102356 .. 5102393 - -11.2  -2.61264   TCCGTGATGCAGAAT   GGGGCTGGTGCCACCC GGATGT GGGTGTTACCAGTCCC    CTTTTCTTGGCGCCG  66 46
NtRootA1_46600 5083448 .. 5083502 -  -5.7  -3.19522   TGATTGAACAGTCAA GAGGAACTC-CATGATTCA-GGCGCCC ACT GAGCGCCACGATGAATGTGGGTTCCTC CCCACTCTGTATTGG  51 294
      gcvP_2 NONE
      gcvT_2 5079287 .. 5079323 - -11.3  -2.60392   CAGCGCGCAAGCAAT    CGGCGCCGCCTTGGCCA CAT CGGCCCCTGCGGTGCCG    GCCTCCGGAAGCGGG  66 157
      gcvH_3 NONE
      glyA_3 5077301 .. 5077314 -  -4.5  -4.57482   CCATTCACAAACAAA               CGAAC CCGC GTCCG                GACCGGACGACCCGA  72 203
      sdaA_3 5075261 .. 5075271 -  -4.6  -3.57561   GTTCAATCGCGCAAA                 GCAG GCC CCGC                 AACGCGGGTAAGTCT  53 40
      lipA_2 NONE
NtRootA1_46530 5073342 .. 5073361 -  -3.4   -2.7641   AAAAATTGGGGAAAT            TCCGGACC TTAA GCTCCGGT             TACCGGAGCCCTTCG  41 25
NtRootA1_46520 5071691 .. 5071711 -  -4.7  -3.09878   GCCACTGAGCCAACA            TTGTGCCCA TCT TGAGCAAAA            ACTGCGCTGGTGTTC  47 95
NtRootA1_46510 5070764 .. 5070813 - -10.8  -3.14931   TTCAGGCGGGAGGAA TGCGGA-A-GCCGGGGACCACC ACTCGCAA GGTGGTCCCCGGCATGTACGCG CTACTGGCTGGAGAC  66 26
NtRootA1_46500 NONE
NtRootA1_46490 NONE
NtRootA1_46480 5068036 .. 5068069 - -14.8  -2.87132   GGGTTTGTGCAGAGA     TAGTGCCCCTTATC ACGAGG AATAAGGGGCACTA      TCGGTTGCTCACGAC  82 47
NtRootA1_46470 NONE
NtRootA1_46460 NONE
NtRootA1_46450 5065958 .. 5065987 - -17.9  -3.97042   GTAGCACCAACGAAA       GAGGCCCCAACGC TTTC GCGTCAGGGCCTC        CCGGAGCTCGTTGAA 100 41
NtRootA1_46440 5064456 .. 5064473 -  -3.3  -3.88291   GAGCAGTGCCACAAA             GAGACGG AGGT CCAGCTC              AGCTGGCTGCAAACC  56 103
NtRootA1_46410 5060719 .. 5060764 - -22.6  -3.44848   CTGGCTCAGGAAATA CCGGCGGACCTGATCGGGCA GGGGGG CGCCCGACCAGGCCCGGCGG GGCTCTGTTTGTTGA 100 55
NtRootA1_46390 NONE
NtRootA1_46380 5059385 .. 5059438 -  -4.5  -4.15565   CCCATCAGGTCAAAA GTCCTGAGC-CCGTGCCGGCGG GAGAACGGTAA CCGCCGGCACGACGCTAAATGC TTCTCTGGCCGTCCA  64 18
NtRootA1_46350 5057221 .. 5057235 -  -8.6  -3.25823   CCGGTGTTACATGAA               TTCCGT TGA ACGGAA               CCAGGACTTCAATCC  63 34
        pobA 5055699 .. 5055723 -  -2.7  -4.73682   CCTCAGAACACAAAA          GAGCCCTCCGA CCG TAAGAGTGCCC          AGCGCATAAGAGTGC  70 248
NtRootA1_46290 5050655 .. 5050673 -  -2.2  -3.90744   CTGTTGCGGAAAGAA             CGGTCACC TCA GCCGTCCG             AAGCAGCCCTCTCAG  54 15
NtRootA1_46260 5047798 .. 5047827 - -20.7  -3.85698   GGCTGGCTGGATAAA       GGCCCGACGGCGG CCTC CCGCCGTCGGGCG        TTTTCACCCCTCAGT 100 63
NtRootA1_46250 5047468 .. 5047486 -  -2.2  -4.15044   TCCGGCGCCAAGAAA             GCGCCCCG AAA CCAGCCGC             TGAAAAGGGCCGCAG  59 41
NtRootA1_46230 NONE
NtRootA1_46220 5043992 .. 5044021 - -21.5  -3.96148   CCGCTTTAGCAGAAA       CGCACGACGGCGA CCTT CCGCCGTCGTGCG        TTTCCGTCTGCCTTG 100 48
NtRootA1_46200 5042619 .. 5042629 -  -2.4  -4.16016   TCACTTCGGAAGAAA                 CCAC ATG GAGG                 AGTGGCTGCCCGCTG  59 430
NtRootA1_46150 5040525 .. 5040535 -  -4.6  -3.75153   GGCCCGGAAGGGAAA                 CGGG CCA CCCA                 CGGGTCGTCTTACTC  56 35
NtRootA1_46140 5038866 .. 5038895 - -11.3  -4.46073   GCGCAACACAAGAAA       CGCGCGACGCCGA CCTA CCGCCGTCGTGCG        TTTTGCCCCTCAGGC  93 42
NtRootA1_46120 5035793 .. 5035806 -  -3.1  -4.11585   AGCGACGACAAAGAA               GCTAGC CTC GCT-GC               CCGGTTTGCGGCCTA  61 264
      marR_2 5033693 .. 5033714 -  -8.8  -2.53908   AAACCGAGGACTAAC           CTGACTGA CATGAC TCAGTCAG            CGCGCGCGTGGATCG  53 519
NtRootA1_46010 5024777 .. 5024797 - -16.1  -3.32268   GAAGGACGGTCAGAA            GCGCCGCCC GTT GAGCGGCGC            GGTACGGCCAGCTAC  89 238
NtRootA1_45990 5020933 .. 5020960 -  -2.1  -3.15249   GAGAGTTCCCATCAA       CTCCATTGGCTGA TAGT TCAACCA-TGG-G        ACGGGGCCCTCAAGA  41 98
NtRootA1_45980 5020675 .. 5020685 -  -2.4  -3.47227   CTCGAACGAGTACAA                 GACC ACG GGGC                 GCAGGTGGCTTGCTA  46 38
NtRootA1_45970 5019793 .. 5019814 -  -2.8  -3.60805   ACATTGGACTCTAAA           CGCACGGG CTAGGT CCGGAGCG            TTTTGGCCTTCACCA  49 12
NtRootA1_45960 NONE
NtRootA1_45950 5017738 .. 5017751 -  -3.7   -3.7347   CCGAATAGTCAACAA               GGAGG CTTT CCGCC                TGATTGGCCTCAAAG  56 471
NtRootA1_45900 5015361 .. 5015371 -  -6.8  -3.33261   CGTGAACTGGGAGAA                 GCCA TAC TGGC                 CGCCGTCGAGCGCAC  58 141
NtRootA1_45880 NONE
NtRootA1_45870 5012295 .. 5012351 - -18.2  -3.05384   TCCTTTTTCATCCAA CGCGGGGTCAGTTACGGCCCAT GTTGGGTGCGTTT ATGGGCCGTAAGTGACCCCGGG TTGCTTTTAGTTGGT 100 32
NtRootA1_45860 5010710 .. 5010736 -    -6  -2.83715   CTGAGTAGCAGTAGA        TGC-CGTTTTG GGGGCT CAAAACGCGCA         CTATTGCGACCTAGT  49 46
NtRootA1_45850 NONE
        hpcG NONE
NtRootA1_45830 5007649 .. 5007666 -  -6.3  -2.72344   GTGGACCTCGAATGA             GCCCG-AT GAC ATCCGGGC             CTTGTTCACTGAGGA  49 338
NtRootA1_45770 5003580 .. 5003591 -  -2.2  -2.78762   ACAGGAGCAACATCA                GCCA TCAG TAGC                 CCCTCCCGCCGGAGA  39 18
NtRootA1_45760 5001919 .. 5001951 -   -12  -3.23692   TACGATCATCATCAA      CGCAGCCATGCTGT ACCTG ACAGCGTGGCTGAG      CAGCTTTACGCCTGT  70 318
         pat 5000304 .. 5000335 - -21.8  -2.87132   TGTCGCTGGGATATA      TGCCCATTCCGGAA TGCA TTCCGGAATGGGCA       TATATTTTGACTTTC 100 88
        pdhA NONE
NtRootA1_45720 NONE
NtRootA1_45710 4996321 .. 4996340 -  -3.5  -3.25942   AGGTCCTGACAGCAA            CTGGGCA GGCACA TGACCAG             ACTTGCCAGCGGCCG  45 103
NtRootA1_45700 4995287 .. 4995301 -  -2.8  -4.38712   GTCATCGTTATAAAA               TTGAGA TGC CCCCAA               TGGCGTGAGCCATCC  64 445
NtRootA1_45660 4992458 .. 4992470 -  -4.7  -3.93262   GGGTAAGACATTAAA                GCCGG GTT CCGCC                GTCGTGCGCTTTCCT  59 60
NtRootA1_45650 4991286 .. 4991310 -  -4.1  -3.97947   CGGATGGAGCAGAAA          CCACCTCCAGA CCG TCCGGCGGCGC          CCGGCGTGCTCTACG  60 41
NtRootA1_45640 4990433 .. 4990446 -  -2.3  -2.75064   GTTCGGATGCAACGA               CAGCC TGGT GCCTG                TCCGCGGCGCCCTGG  39 385
NtRootA1_45610 4988458 .. 4988474 -  -4.3   -3.1552   CTTGAGCTAGGAAGA              TCGCATG AGG CGCGCGA              CGAGTTCGCGCCAGG  45 0
        oppB NONE
        oppC NONE
      oppD_2 NONE
NtRootA1_45570 4982143 .. 4982190 -  -7.9  -3.60627   GGATGGCACGGCAAA GGCCGGGA-CCTCC-C-AAACC ATTTACA GGTTCAGAGGAAGATCCCGGCC TTCGTGTGTTTCAAG  62 56
NtRootA1_45560 4980482 .. 4980494 -  -2.6  -3.53091   AGTTTTCCCGTCAAA                GGCA TTCCC CGCC                TACCCCACTATCCGC  47 481
NtRootA1_45530 4978144 .. 4978182 -   -14  -3.53811   GCCACCGTCCGTAAA  GTGGTGGGGCTCC-CCGT ACTAA ACGAAGGAGCCCCACC-C  TTAAACCGTAACCGC  83 48
NtRootA1_45520 NONE
NtRootA1_45510 4976494 .. 4976547 - -19.8  -3.28712   TTGCGGCGGTGACAA GTCGC-TGGCCCGCTATCCCGTTGCT GCCC AGCAACGGGATAGCGGGCTTTGC-AC GTGTTGGGGCGGCAA 100 69
      putR_2 4973867 .. 4973896 - -20.8  -2.55216   TAGCAGCGACAAGAT       GGGGCAGGCACC TACCAG GGTGCCTGCCCC        TTGTGCTCCCTTACG 100 57
NtRootA1_45480 4973351 .. 4973361 -  -2.4  -3.30243   ACGCAGTCGTCAGAA                 GAGG CAC CCGC                 TCAGTCGCCGTCGTC  44 26
NtRootA1_45470 NONE
NtRootA1_45460 4971860 .. 4971871 -  -2.2  -3.69092   AACAGCAAGGGGAAA                GTCCG GCG CGG-C                GCCACGGGTGGGATG  52 451
      ligC_2 4970567 .. 4970625 - -10.6  -2.77701   AGGGCACGAAGAGTA GCTCGTCGCCAAGCCGCTATCCCGTCGTT GCTC AACAACGGGATAGCGGCTCAACAACG--- TGATAACCGACGGAC  63 49
NtRootA1_45380 NONE
NtRootA1_45370 NONE
NtRootA1_45360 NONE
NtRootA1_45350 NONE
NtRootA1_45340 NONE
NtRootA1_45330 NONE
NtRootA1_45320 4959143 .. 4959162 -  -2.1  -3.04517   AGCGTTCGCCAAAAC            CTCCCCT GATGTG AGAGAAG             ATCGGCGAAAAGCGC  41 78
NtRootA1_45310 4955174 .. 4955227 -  -8.1  -3.14881   GAACCCGCCGATGAA GCCCTCGACGCCGCC-AGCATCCT CTCGCTC ATGACGCTCGGTGCCGCCAAGGGC GACGTCGTGGTGCTG  58 233
NtRootA1_45280 4952453 .. 4952467 -  -3.5  -3.61239   TAGATCGAGAGAGAA               CAGCC TTAGG AGCTG               CTGGAAATGCGGTGA  49 16
        mtlA NONE
        mtlD 4949168 .. 4949188 -  -6.1  -3.32698   TTATGTGAGAGAAGA            TCGCCCACA GGA TGTGAGAGA            AGATCGCCCGAGAAG  54 62
NtRootA1_45180 4943049 .. 4943096 - -14.3  -3.38316   GCAGCACCCAAGTAA GTCGCATGTGAGCGCGTTT AGAGCCCTGA AAACGCGCACAAATGCGAC TCAGTTGGGTTAAAG  87 35
NtRootA1_45170 NONE
NtRootA1_45160 4941215 .. 4941262 - -18.6  -3.35813   CCTCAGCCCAAGTAA GTCGCATTAGTGCGCGTTTTGA ACGC TCAAAACGCGCACTGCTGCTAC GTAGTTGGGTGCCTA 100 38
NtRootA1_45120 NONE
NtRootA1_45110 NONE
NtRootA1_45100 NONE
        proW 4933419 .. 4933432 -  -3.1  -3.29263   AGATGGCGCTTACAA               GGCATG CAG CA-GCC               AGGTGGGGTGGATGG  45 80
NtRootA1_45080 NONE
      hutU_2 4930626 .. 4930681 - -10.4  -3.09516   GGTGCCAGCACCCAA CTGACTGGCAGTTGTGGTTGTTGTGA AGGC TCGTGGCAACCACTATTGCCAGTCAG TTGGGTTACTAGGCT  66 34
      hutH_3 4929048 .. 4929075 - -22.8  -4.06384   CTCGAATACCAGAAA        CGGCAGGCGGTC ATCG GACCGCCTGCCG         TTATTGTTTTTGGAG 100 81
NtRootA1_45030 4924830 .. 4924852 -  -6.2  -3.89346   CGGGGACGGCACAAA           CGACATCCTC GCC AAGGACGACG           CAGGCAACCTATTCC  62 471
NtRootA1_44970 4917419 .. 4917432 -  -2.4  -4.11692   TAGGCAGCTCCAAAA               GTGA CCCAGC TCAC                GCGGAAAAACGCATT  59 79
NtRootA1_44960 4915948 .. 4915992 - -21.4  -3.05384   TTGCTCCTTACCGAA CAGCGACGGCGACGCTCCCC GGCAT GGGAGGCGTCGCCGTCGTCG TTGTTCTTGCGTTAG 100 47
NtRootA1_44950 4915278 .. 4915308 - -14.9  -4.16943   GCTGAGATGGCAAAA       GATGACAATCCCA CGGCC CGGGATTGTCATC       TTTTGCCATCTCGGC 100 49
NtRootA1_44920 4910869 .. 4910890 -  -7.9  -3.08679   CCCGCGGAGTGAAGA           CCGTGGGCG CCAC CGCCCACTA            CGTCAACGGCGAGCT  54 300
NtRootA1_44840 4901113 .. 4901153 - -30.6   -4.2461   ACTTTCACGAAGAAA  GGCCCGACGTCGGCACCC GGGGT GGGTGCCGACGTCGAGCC  TTTAGTACGGGACAG 100 272
        proP NONE
NtRootA1_44820 NONE
NtRootA1_44810 4897214 .. 4897246 - -16.2  -2.84098   CGGTTCAACGAACGA      CGGCGGTCGTCCCC TTCGC GGGGACGGTCGCCG      TTCTGCTTTCGCGAG  86 76
NtRootA1_44790 4895547 .. 4895560 -  -4.5  -2.64099   TTGGTTGATTACAAG               GCTAC GCTT GCAGC                TGCTCCTCCACAATG  43 45
NtRootA1_44780 NONE
NtRootA1_44770 NONE
      putR_1 4893143 .. 4893159 -  -6.5  -2.52543   ACCCTGTCCAAGGCA              CCTGCCG CCT CGGCAAA              CAAAGCAGCATCCCC  48 319
NtRootA1_44720 4891078 .. 4891090 -  -3.3  -2.70932   CTCCCCGGTGAAGGA                GCCCT CAC AGGGA                CATGCCTGCAGCGGA  41 84
NtRootA1_44710 4890436 .. 4890457 -  -5.7  -4.40561   GCTCCCCAAAAAGAA           GCCCTACCG GAAG CGGCGGGAC            GACGCGCCCACCCTG  69 284
NtRootA1_44700 4889618 .. 4889628 -  -2.4  -4.86731   TTCGGGCAAATAAAA                 GCAG AGA CAGC                 TTCGAAGTCTCCATC  74 407
      dapA_3 4886715 .. 4886763 -  -2.3  -4.34402   GGGTGGAGAGCAAAA GCTGGGGC--ACGGGCGGCGGGCC GAGG GACCCGCCGCCCATTAGGACCT-C TGGTTGCCCCGTGGG  62 52
NtRootA1_44650 4885304 .. 4885344 - -24.3  -3.18264   GCGTTTAGGTAGCAA  CAAAAGTAGTGCCCCTGTA GTT TTCAGGGGCACTACTTTTG  GTGGGGGCGTCTTAG 100 37
NtRootA1_44640 NONE
NtRootA1_44630 4884393 .. 4884409 - -10.1  -2.70932   GGGGTTGCTGAAGGA              GGGCCCA GCG TAGGCCC              CTGGATGTATCGAAG  63 76
NtRootA1_44610 NONE
NtRootA1_44600 4881552 .. 4881588 -  -2.8  -4.07687   AGCCCCCGGCCAAAA    GGGCACTGGCGGGACT ACGAA AGCCCTGCAATTGCCT    CCCGGACGGCTGAAC  58 3
NtRootA1_44580 NONE
NtRootA1_44570 4879096 .. 4879108 -  -6.2  -3.38812   TCGGCGGGAAGAAGA                CGGG TATCT CCCG                CAAGCACTTCCTCGC  52 227
NtRootA1_44530 4875728 .. 4875738 -  -6.8  -3.05384   CTTCGGCTGAGGTAA                 TCCG GTT CGGA                 TACGCCCGGTCGGCA  54 168
NtRootA1_44520 4874641 .. 4874686 -  -4.6  -4.07568   GCGTGCCTTGGAAAA GGCCGTGTACGACGACGCC GCTACTTCG GGCG-CGGCGTCCACAGTC TCGTCGAACGGACGG  63 213
NtRootA1_44500 NONE
NtRootA1_44490 NONE
NtRootA1_44480 4870586 .. 4870638 -  -3.3  -3.04144   CGGCCATCGTGAACA CGTGCTCGATTGCCGCGACCGCCGGG CTTC CCCAGCGGGCGCTGTACTCG-GC--G TCCAAGGGCGCCGTG  43 372
NtRootA1_44450 NONE
NtRootA1_44440 NONE
NtRootA1_44430 NONE
NtRootA1_44420 NONE
NtRootA1_44410 4864090 .. 4864123 -  -4.5    -3.745   GCATCGATGAAAACA     CCGACGTCGAAGAGCT CGT AGCCCA-CGACCTCGA     GTTCCACAGCATCAT  56 286
NtRootA1_44350 4857994 .. 4858006 -  -4.7  -2.66964   TCATGCATGACATTA                TGCGC CGC GCGCG                GCTCTCATGGCAGGC  43 79
NtRootA1_44340 4857334 .. 4857344 -  -8.2  -3.53012   CCTTGGGCTGGGAAA                 CGGG AGT CCCG                 TCCAATTTACCGTGA  62 55
NtRootA1_44330 4856706 .. 4856720 -  -7.1   -4.2558   CACCTGCCAGGAAAA               CCCCA CATCC TGGGG               CTGCCCCAACGCCGA  74 156
NtRootA1_44290 4853867 .. 4853877 -  -6.8  -3.05384   CTTCGGCTGAGGTAA                 TCCG GTT CGGA                 TACGCCCGGTCGGCA  54 168
NtRootA1_44280 4853017 .. 4853031 -  -5.7  -3.32022   TCCGGTATATATCAA               GCTGT TTGTG ACAGC               TGGGTGGTTTTTCTG  51 7
NtRootA1_44250 4849769 .. 4849811 -   -15  -4.17958   AACAGCCCGAAGAAA TCGGGCCCGAACACTTCC AAGAACG GAAAGTCTTCGAGCCCGA TCCGCAAGGGTTCGC 100 63
NtRootA1_44230 4848023 .. 4848034 -  -2.2  -4.20025   AAGCTCGAACACAAA                CAAG CGTT CCTG                 GGCAGGATCGTGGAC  59 371
NtRootA1_44200 NONE
NtRootA1_44190 NONE
NtRootA1_44180 4839816 .. 4839861 - -11.1  -4.90869   AGGACGAACCAAAAA GGAGATCCGCCGGTGCGTGAAA CGC TATCTCGC-CCGACGGACCTAC CGAACCCTTAACGCC 100 95
NtRootA1_44150 NONE
NtRootA1_44140 NONE
NtRootA1_44130 NONE
NtRootA1_44120 NONE
NtRootA1_44110 4832350 .. 4832379 -  -3.3  -2.80784   CAAAGCGACGAAGGA       GCAGCACGCCGAG GATG CCCGCCAAGCGGC        CGGACCGGGCGGCGA  41 54
NtRootA1_44100 4830952 .. 4830966 -  -8.5  -2.86449   ATCTTAGGAGAATTA               GCCGG TTGGC CCGGC               CTTGCTGCCGCCGCA  59 362
NtRootA1_44080 NONE
NtRootA1_44070 4829145 .. 4829164 -  -6.4  -3.60792   TCCGGAATCGTCAAA            GCC-CACGC CAT GCGTGAAGC            TGCACTGTCCTTAGG  59 498
       rpmB2 NONE
        rpmG NONE
        rpsN 4825715 .. 4825759 - -21.5  -3.68908   AAAGAGCCACTTAAA CGCAGAAAAGGCCGGCAACCA TAA CGGTTGCCGGCCCTTTCAGAG CTTCGTGATTACCAG 100 34
NtRootA1_r00180 4822928 .. 4822947 -  -9.3  -4.57569   GCATTGCTGCAAAAA            GGTCCTG TTGCCT CAGGACC             CAACAGTGCGCCAAA  87 280
NtRootA1_r00170 NONE
NtRootA1_r00160 4819189 .. 4819225 -   -18  -2.73441   TAGCAGTGGTTAAAG    TGGGGAAGCCCCGACC GTGGT GGTCGGGGCTTCCCGT    TAATTGTTGTCCGGC  89 39
NtRootA1_r00150 4815470 .. 4815489 -  -9.3  -4.57569   GCATTGCTGCAAAAA            GGTCCTG TTGCCT CAGGACC             CAACAGTGCGCCAAA  87 280
NtRootA1_r00140 NONE
NtRootA1_r00130 4811731 .. 4811767 -   -18  -2.71924   GATTGCCCGTTAAAG    TGGGGAAGCCCCGACC GTGGT GGTCGGGGCTTCCCGT    TAATTGTTGTCCGGC  89 39
NtRootA1_43980 4811057 .. 4811083 -  -2.8  -4.18488   AGCCAGCGTAAGAAA         TCACGACGCCGA CAG CCACCGCCGGGA         GTTGCACGCGGCTAG  60 75
        hup1 4810498 .. 4810525 - -21.4  -4.19238   TGCTTAACGGCAAAA        GGGACGGCAACC AGTT GGTTGCCGTCCC         TTTCAGGCGTTCGCC 100 51
NtRootA1_43960 NONE
NtRootA1_43950 4806068 .. 4806102 -  -7.1  -3.71848   TGGGGGCATGAAGAA    GCCCGGGTCCTCCCTC TCAA GAGTCAA-ACCCGGGC     CAGTTCAGCAGGCTT  63 40
NtRootA1_43940 4805122 .. 4805148 -  -2.8  -4.08767   CCGAGCTGCCCAAAA         CTGGGCTGGTTA CAC CAAGCGGCCCCG         ACGAAGGACCTCACG  58 8
NtRootA1_43860 NONE
        ilvA 4796701 .. 4796722 -  -4.3  -2.52464   GCGTCCCTGAATCCA           CGCGCCCTT TTAG AAGTGCGCT            GGATCCGTGTTGGCG  41 13
NtRootA1_43840 4795529 .. 4795539 -    -4  -2.74144   GCGTCATGCCTAAAT                 CATT GCA AATG                 CGTAAAGCTTTCGAA  43 61
      otsB_2 4792769 .. 4792818 -   -18  -2.70932   CGCCTCCCCCAACTA GGTCGCATTTGTGCGCGTTTTG GGCGCT CAAAACGCGCTCAATTGCGACT CAGTTGGACTACTCG  89 34
NtRootA1_43800 4790986 .. 4791001 -  -6.2  -3.63627   GGGCCACACTTCAAA              CTATAC GTTT GTATAG               TTTGAAGTGTCAACG  61 35
NtRootA1_43790 NONE
NtRootA1_43780 NONE
NtRootA1_43770 NONE
        aofH 4786761 .. 4786811 - -15.5  -4.09739   TTAACCCGGCCAAAA GCCAAAC-CTCGACGTCGGCACTC ACCA GAGTGCCGACGTCGAGCGCGTTTC GGGTTGTTTTAGACA 100 34
NtRootA1_43740 4783827 .. 4783882 - -10.2  -2.52742   AGCTCCGGACAACAT GCCGGACCGCATTCGCGCAGCC-GTGC GGA ACACAGGTTCCGTGCTTGCGGACCGGC CTGCCGCCGTCGTGC  59 359
NtRootA1_43690 4777917 .. 4777972 - -30.8  -3.05384   TCCCGCGGCACCCAA CTGAGTCGCATTAGTGCGCGTTATGA GCCT TCAAAACGCGCACTACTGCGACTCAG TTGGGTGAGCCGGCC 100 22
NtRootA1_43610 4767704 .. 4767722 -  -3.9  -2.62522   CCACTTAATAGTAAG            CATGCTGA TGAT TC-GCATG             GAAGGACCAGCCGCA  42 77
NtRootA1_43600 NONE
NtRootA1_43590 4765918 .. 4765950 - -22.1  -3.34344   CCACCCCCCAAGCAA      GCGAGCCCCTGCC CGGTCAC GGCAGGGGCTCGC      TTTTTCGCCCCCTGT 100 387
NtRootA1_43540 4761302 .. 4761327 -  -7.7  -2.78596   CATGCTCCGATTACA         TATTCATAGCG GTTT CGCCATAAATA          TGTAATTTGGCGCGT  54 81
NtRootA1_43530 NONE
NtRootA1_43520 4759996 .. 4760014 - -12.4  -2.78679   CCTGGGGACCCAAAG             CGGAACGG TTC CCGCTCCG             GAACAGGAAGCTGCT  66 250
NtRootA1_43490 4756716 .. 4756741 -  -8.1  -2.52896   CCACCGGGTAACCCA         TGGCCGGCCCG CCGT CGAGCCCGCCC          AGTGAGTCCAGGTCA  53 109
NtRootA1_43460 4753557 .. 4753567 -  -4.6  -3.54543   AGTGACCGGCTCAAA                 CACC ACG GGCG                 TCGCGGGCCTTGGCA  55 154
NtRootA1_43430 4750540 .. 4750550 -  -6.8  -3.30124   CGCCACGGCCCACAA                 TGCG ACC CGCA                 TCCTTGAACCCCTGA  55 488
NtRootA1_43400 4749093 .. 4749105 -  -3.3  -3.62597   CCGATTGTTGAAGAA                GGTGG AGC CCAGC                GATGGGGCATCCTCG  51 135
NtRootA1_43380 NONE
NtRootA1_43370 NONE
NtRootA1_43360 NONE
NtRootA1_43350 NONE
NtRootA1_43340 NONE
NtRootA1_43330 4741104 .. 4741117 -  -2.3  -3.72968   ACGACGATATGGAAA               CGAGC CTCC GCTCT                GCCTTGTCGTTCGCG  52 232
NtRootA1_43300 NONE
NtRootA1_43290 NONE
NtRootA1_43280 4736778 .. 4736795 -  -4.8   -4.1673   GAAGCGCTGAACAAA             TCGCCG ATTCAG CGGCAA              AGATCACAGAGTACC  64 61
NtRootA1_43270 4735144 .. 4735200 - -12.4  -3.32022   TCCCGGATACAGCAA CCCGGGGTCACTTACGGCCCAT GTGAGGGTCGATT ATGGGCTCTAAGTGACCCCGCG TTGCAGGTGGGCCTA  75 38
NtRootA1_43260 4733542 .. 4733562 -  -3.8  -3.57144   GGGCGGACGGGCAAA            GCGGTGGG CTGTT CCGGCCGC            GGCCGCCTTGCTCGC  53 353
NtRootA1_43210 4729789 .. 4729805 -    -3  -3.32521   AGGACATCGTCAGAA             GTCCAGA AGAT TCTGG-C              GGAAGCCACCGTCGC  45 3
      hutH_2 NONE
NtRootA1_43190 4726998 .. 4727009 -  -3.6   -4.3129   GAGGGACCACCAAAA                CGCC GCCG GACG                 TGAGAGAGGGACCCC  65 134
NtRootA1_43180 4726362 .. 4726401 - -22.3  -3.85698   CTCTTTGGCGACAAA  TCAGCCCCTGCGCAACC ATTTCG GGTTGCCCAGGGGCTGA   TGTTGTTTGAAAGTA 100 69
NtRootA1_43140 4721554 .. 4721595 -  -3.1   -3.6502   TATGCGCGATCGAAA GCTACG-CCACGGTGCATCA AATGG TGA-GCACAGTGGACGC-GC ACCTTCGCCCGGGCG  51 428
NtRootA1_43100 4717838 .. 4717858 -  -8.9  -2.67992   CACAGGACCAGATCA            CCCGGATTG CCC CTACCCGGG            TTTCCGCCGTAGACA  53 299
NtRootA1_43060 4713302 .. 4713312 -  -3.2  -3.33492   TCAGCGAGGCCAGAA                 GGTC CTC AACC                 GGATCTTTGGTTGCC  47 99
NtRootA1_43040 NONE
      dinB_2 4711132 .. 4711154 - -16.4  -3.00525   TGTCCGGAAAGTACA           CTCCGGAAAC CGA GTTTCCGGAG           AACGACCACCGCAAC  84 372
NtRootA1_42970 4704659 .. 4704677 - -13.8  -3.42699   ACGCAGCCAGGACAA             CCCGCGAG GTT CCCGCGGG             TGCGATTGTCGGCCA  79 349
NtRootA1_42920 4700217 .. 4700228 -    -3  -2.78465   ATCGATATAGAGAAG                TATC GGGC GATA                 AATTGATGATTGTCA  41 66
NtRootA1_42910 NONE
      trxB_2 NONE
NtRootA1_42890 NONE
NtRootA1_42880 4696431 .. 4696441 -  -6.8  -3.17714   CGAAATCCCCACCAA                 GGAG GAG CTCC                 CGGGTCCCGCGATCA  53 316
NtRootA1_42850 4693192 .. 4693206 -  -5.6  -3.21099   CCGCTGGACGAGGAA               CGCGTC AAC GAAGCG               CGCATCGTGATCCCG  51 323
        tynA NONE
NtRootA1_42820 4690302 .. 4690318 -  -2.1  -4.27316   CTGTGCAACCCAAAA              GGGCTGA TTA TCCGCCG              TACCAACGCCAAAGA  62 44
NtRootA1_42810 NONE
NtRootA1_42800 4688001 .. 4688038 -  -8.3  -2.74461   GAGGTAGCGGGAAAG   CTGCGCGTTCGCGGGGA AACT TCCCTGCGAATTGGCAG    GCTTCCCGCGAAGTC  54 59
NtRootA1_42770 4685389 .. 4685444 - -19.2  -3.20723   GGTGGACTAACCCAA GTAGGTCGCATTTGTGCGCGTTTTGA CGGC TCAAAACGCGCTTAAGTGCGACCTAG TTGGGGGTGCCAGGC 100 43
NtRootA1_42620 NONE
NtRootA1_42610 NONE
NtRootA1_42600 4668269 .. 4668296 -  -9.8  -3.04792   CGACGAGCTGGAAGA        GAGG-GTCCGGCA GGG CGCCGGGCGCCTC        CCCTTGTTCCGTCTT  62 524
        dnaK NONE
        grpE 4665378 .. 4665409 -  -6.4     -2.55   GAAGATCCCAAGCCA      CCCGG-CGTAGGGGC GGC GCCCCCTCATCCGCG      AAGGCGGAGCGTGAG  48 42
NtRootA1_42560 4664276 .. 4664294 -  -7.3  -3.28791   ACCGTCTCCTTACAA             CCGGGCC TTCGC GGCCAGG             TCGTGACGCGGGTTG  56 1
NtRootA1_42550 4663774 .. 4663800 -  -2.9  -3.08813   GCCCAGTCCAATAGA        GCCGCCCAGCCC AATA GAG-TGAGCGCC         CAGCAAGTTCTCTCT  43 62
NtRootA1_42540 4662810 .. 4662838 -  -3.8  -2.66316   TCCCTCACTACACGA       GCATG-GGACGCT TTCC AGCGCCTACACGC        CAACCACTAGCACGT  42 133
NtRootA1_42530 4662381 .. 4662399 -  -6.6  -3.28637   CATGAAGACCACCAA             GCCTTCCC CAC AGGATGGC             GCTTCCGCTCCGTCT  55 110
NtRootA1_42500 4660765 .. 4660793 - -23.3  -3.06501   CACATCCCGACGCAA        GAAGGGGACCAGC TCA GCTGGTCCCCTTC        TTCGCGTTCAGTGGC 100 60
NtRootA1_42440 NONE
      lacI_4 4652328 .. 4652351 -  -7.4  -2.73875   GCGGCGGCAATACGA          GCATTAGAGG GAAT CCTCCAGTGC           AGCATCGGCGCGCAA  51 5
NtRootA1_42420 4650090 .. 4650110 -  -4.6  -3.77832   GCCTAAATGCAATAA            GGACGTCG TAACT CACCGTCC            TGGTCCTGAGCCGTC  56 360
NtRootA1_42400 NONE
NtRootA1_42390 4643983 .. 4644009 -  -7.9  -3.17194   ACCCCGGCAACGGAA        CCGGAG-GCTGG CTAG CCCGCACCCCGG         TCGGATCAGGCTGGA  56 391
NtRootA1_42360 4637605 .. 4637620 -  -7.5  -3.06492   GCAGGCACCCGAACA              GCGGG GTCCAG CCCGC               AAAGGTTGCCTGCCG  54 58
NtRootA1_42350 4636126 .. 4636144 -  -8.8  -3.23274   CGTCGGACAAGCCAA             CCGTTGAC GGC GTCAGCGG             CACCGTGGGAACCAT  63 351
NtRootA1_42330 4635689 .. 4635706 -  -5.6  -4.07885   CACGCGCGGGGAAAA             GGTTCA GTTGCT TGAACC              ATTCTTCCCCTGCTG  64 53
NtRootA1_42320 NONE
NtRootA1_42310 4634091 .. 4634106 -  -4.6  -3.60627   TCATTTCAGCGCAAA              GCTTCG TGGA CGGAGC               CAAGGCGGCCGGCAA  55 366
NtRootA1_42260 4630010 .. 4630020 -  -2.4   -3.2614   GATCCCCGAGACCAA                 GGGC AAG GACC                 TGACGGCCTAGCTCG  44 105
NtRootA1_42230 4625868 .. 4625886 - -13.2   -3.2794   GCCCATGCAGAGGAA             TCCGGTCA CGC TGACCGGA             TCACCTGGCAGCAAC  74 451
NtRootA1_42210 4622846 .. 4622863 -  -9.9  -3.33162   GACGTTACCCTAGAA             CCTCAAC TAAT GTTGAGG              TCAATCCACCACGCC  67 522
NtRootA1_42190 4621214 .. 4621230 -  -3.5   -4.8048   CTCTCACATGAAAAA              TGCCCCG TCA CGTGGCC              TTTTGGGCCACCTGC  73 230
NtRootA1_42180 4618797 .. 4618808 -  -5.8  -3.74158   TGAAGGACAGCGAAA                CGGA TACT TCCG                 AAGTGCCGAAGCTCG  60 515
NtRootA1_42120 NONE
NtRootA1_42110 4614457 .. 4614467 -  -2.4   -3.2794   CCGGACCGACATTAA                 GCCC AAG GGTC                 TGCCCTGAATCGGCC  44 69
NtRootA1_42100 4613955 .. 4613998 -  -9.4  -2.62616   CCACCGGTTAGACGA CTCGCTGCAGGCCAGACGGT AGGA ATCGTCTGCCGGGCTGCGAG TCGTCTAAATGGAGC  60 49
NtRootA1_42060 NONE
        modA NONE
        modB 4608600 .. 4608617 -  -3.3  -2.75577   GCACCTCAAAACTCA             CGGTTGA ACCT CCACCCG              GGCGCCAGCATTGCG  41 5
NtRootA1_42030 4607181 .. 4607193 -  -9.1  -4.11371   CAACATCCTGGAAAA                CCCGA ACG TCGGG                ATTTTGTCCGTGGTT  79 353
        clpB 4603935 .. 4603954 -  -7.8  -2.82623   GGCGGCCGATAAGTA            CGTACTGC TTCA GCAGAACG             TCTACCCGAGCACCA  52 138
NtRootA1_41990 4602516 .. 4602559 - -18.2  -5.36441   TTTCCAGACAAAAAA GAGGCCCGC-GGGTACACCAA CGA CTGGCGTGCCCTACGGGCCTC TTTCAGAGATATTCG 100 121
       cfp32 NONE
NtRootA1_41970 4600551 .. 4600588 - -22.1  -3.64703   TTCCTCTTAGTGAAA   GAGCGGCCGGACAGTTG AACT CAACTGCACGGCCGCTC    TTTTGTTTTTGCTGC 100 199
        agxT 4593824 .. 4593836 -  -2.6  -4.00469   CGAACAGGAACGAAA                GCAG GCCTT CCGC                GCAGGTCAGTCGGTC  57 256
NtRootA1_41750 4579181 .. 4579197 -  -6.5   -5.0916   CGCTCAATATAAAAA              CGGCTCC CCC AAAGCCG              AAACCCCATGCGGGA  89 84
NtRootA1_41730 NONE
NtRootA1_41720 4576783 .. 4576798 -  -3.2  -4.68994   ATTACCATCTAAAAA              CCACGC ATAC ACGTGA               CACTTAACCAGCTTC  69 207
NtRootA1_41680 4573128 .. 4573144 -  -6.5  -3.28041   AAGGCCAAGCATGAA              GGTCGGA CCA TCGGACC              AGAGACTTGCGCTTG  54 346
NtRootA1_41640 4568367 .. 4568385 -  -2.3  -3.33696   TTCGTGGGTAAGGAA             TGCTGAG AGCGG CCCAGCC             GCAACCGAACAAGCA  46 207
NtRootA1_41630 NONE
NtRootA1_41620 4564913 .. 4564927 -  -4.2  -3.82261   TGGGAACAAAATCAA               TGCGGT AAA ACCTCA               CGATCATTGGTAGGC  57 29
NtRootA1_41610 4563251 .. 4563264 -  -9.5  -4.37092   AGTGTTCTTATAAAA               CGGCC TTCC GGCCG                TGGAATCGATTCCAA  83 80
NtRootA1_41600 NONE
NtRootA1_41590 NONE
NtRootA1_41580 NONE
NtRootA1_41570 NONE
NtRootA1_41560 NONE
NtRootA1_41550 4556735 .. 4556764 -  -6.4  -5.18371   CCCGAGAAAAGAAAA       TCAGCCCGAGCCG TGAGG CGAG-CGGGCTGA       TCGTGATGAAACAAC  90 42
       paaB1 NONE
NtRootA1_41490 NONE
NtRootA1_41480 4549843 .. 4549886 - -18.9  -2.76468   CAGCACTGAATACGA GAAGGGCTGGGCCGAACGC GGATGT GCGCCCAACCCAGCCCCTC GCCATGGAACGAATT 100 39
NtRootA1_41460 4548736 .. 4548758 -  -9.8  -2.77036   CAACCGAACACATGA           CGCATGGGAC GTT ATCCCAGGCG           CGCCACACTTCGGCG  61 116
NtRootA1_41450 4548278 .. 4548300 -  -4.9  -3.09772   CGAAAGGGCCAAAAT           TAGGTGG TGTTAGGGG CCACCTA           GGTGCTGGCTCAAGG  47 79
NtRootA1_41440 4547112 .. 4547136 -  -6.5  -2.78384   TGGGCGTTGAGGATA         CGCTCATCGG GTTGCG CCGATGAG-G          TCGATGCCCAGCTGT  49 4
NtRootA1_41430 NONE
NtRootA1_41420 NONE
NtRootA1_41410 NONE
NtRootA1_41400 NONE
NtRootA1_41390 4544061 .. 4544093 - -19.2  -2.87132   GGTGTCCGCGATACA     CGCGGGCGGCAGCGA AGGG TCGC-GCCACCCGCG      TGCACAACCTAGGTG 100 34
NtRootA1_41380 4543144 .. 4543174 -  -9.7  -2.90075   CGTTGGGTAAGTAGA      CGGTCGCCGAGGAC ACGA GTCC-CAGCGACGG       ATCAAGCGTAAGTAC  62 52
NtRootA1_41370 NONE
NtRootA1_41360 NONE
NtRootA1_41350 NONE
NtRootA1_41340 4539174 .. 4539193 -  -8.6  -3.53012   TGCTGCTCCCCGAAA            CGG-GCTCA CCG TGAGCTCCG            AGCCGGCATTCATTG  63 243
NtRootA1_41270 4530966 .. 4530983 -  -6.9  -3.18264   TTGTCCAGTTAGGAA             GGCGTCC GCTG GGACTCC              AATTGGAGCTCCACC  56 195
NtRootA1_41260 4530452 .. 4530496 - -10.7  -2.75963   ACTGGGAGGCCAAAG GGCGCGGTC-GGGGCC-GGGA TACCT TCCCTGGCCCCCGACCGCAAA ACCCCATGTCAATCC  63 294
NtRootA1_41250 NONE
NtRootA1_41240 NONE
NtRootA1_41230 NONE
NtRootA1_41220 NONE
NtRootA1_41210 4527072 .. 4527082 -  -2.4  -3.36327   TGACGGTAGCCATAA                 GGTG TTG CTCC                 TTCAATGTTCTCTTC  46 161
NtRootA1_41200 4526565 .. 4526582 -  -2.7  -3.31144   CCTCCACCGGTAGAA             GGCTT AGGCCGGG AAGCC              GCTAAACCAATGCTC  44 27
NtRootA1_41190 4524841 .. 4524856 -  -6.8  -3.61398   GCGGCGCTTCAAGAA              GGCACT GCCC AGCGCC               GACTACCAGGAGATC  59 125
        mmyD NONE
       fabH5 4521918 .. 4521951 -  -4.4  -3.14132   CCCGGCCTGCAGGAA     TCGGTGTCCGGCCC TAGTGC GGGTCGACAACCGA      GATCGATGGCCATGT  47 5
NtRootA1_41150 NONE
NtRootA1_41140 4520880 .. 4520913 - -25.5  -4.65895   GTTGCGATGGAAAAA     GCCTGACGACACCCA AATG TGGGTGTCGTCAGGC      CTTTTACGGAGCGTG 100 51
        acpD NONE
        mmyX 4517421 .. 4517470 - -18.6  -3.73042   GTCTCCAGTAAAAGA CGA-GCGTCCGGCCGAACCTCGCG GTGA CGCGGGG-TCGGCCGGACGAACCG GTGAGCAGGATCCAA 100 72
        mmyB NONE
NtRootA1_41070 NONE
NtRootA1_41060 4512675 .. 4512686 -  -3.6  -4.59773   CGTCAGGTTGAAAAA                CGCC CGCC GGCA                 CGCCAAACAAGGTCA  70 67
NtRootA1_41040 4510983 .. 4510999 -  -6.5  -3.14229   AGATTGTCAGCAACA              CCTTTCC CAT GGAATGG              CCCAAGGGTTCGGGC  53 193
NtRootA1_41020 4508984 .. 4509029 -   -12    -3.918   AGAGAAACCAGCAAA CCCGCAGTTGTGTCG-GAT CACGCCCCC AGCGCGACACAACCGCGGG TTTGTTGTCTTAACC  83 51
        yesX 4503772 .. 4503815 -   -19  -4.53602   CCCACACGAAACAAA CAACCAGTGCCGCCCGGATCA CCA CGATCCGGGCGGCACTC-CTG TTAAAGCGACGCTCC 100 56
       adk_2 4499208 .. 4499241 -    -8  -3.37464   CCACCAAGGTGATAA     CCTCCGGGCGACTG CAGGCC CGGGCACCCGAAGG      ATTCGCGGCCTATCT  58 77
NtRootA1_40890 4493430 .. 4493470 - -21.9   -3.1247   ATTTTTGACAGCCAA  GCGGCCCCGACACGCCG CAGGTAT CGGCGTGTCGGGGCCAG  TGTCAGCTCAAAGCT 100 82
NtRootA1_40880 4492577 .. 4492619 - -24.3  -3.07935   ATTCTACTGAGGCAA CAGGCGGACGACGGCGGCAC TTGA GTGCCGTCGTCGTCCGC-TG CTTGGTGGGGGCGAA 100 72
NtRootA1_40820 4485050 .. 4485060 -  -6.8  -3.05384   CTTCGGCTGAGGTAA                 TCCG GTT CGGA                 TACGCCCGGTCGGCA  54 168
NtRootA1_40810 4483800 .. 4483818 -  -8.8  -3.54029   CGTCACCAACGAGAA             GGACGTGG AGC CCACCTCC             ATGCCGGACACGAAC  65 403
NtRootA1_40760 4477968 .. 4477998 - -18.5  -4.50976   GCCGAGATGACAAAA       GATGGCAGTGTTC GCTGG GAACACTGCCATC       AAATGCCAACTCGGC 100 62
NtRootA1_40720 4474100 .. 4474134 -    -5  -3.48276   GCTCGCTGCAGACAA    GACGACTC-CTACCG TCTTGT CTGCAGCGAGCCGTC     TATGTGGGCCTGCCG  53 81
NtRootA1_40710 4472810 .. 4472820 -  -6.8  -2.52464   GTTTTCCGGAAGCCA                 CGAC CCC GTCG                 CCGCCCTGCTGCTCT  48 255
NtRootA1_40690 NONE
NtRootA1_40680 4468948 .. 4468977 - -16.5  -2.63913   TAGGAGTTCACAGGA       GTGGGGCAGGG CTTCATCT CCCTGCCCCAC        TCCGTAGCGGAGCAA  85 195
NtRootA1_40670 NONE
NtRootA1_40660 NONE
NtRootA1_40650 4463762 .. 4463809 - -28.8  -3.37522   ATGTCACCCAAGTAA GTCGCATTTGTGCGCGTTTAGA AGGC TCAAAACGCGCACAAATGCGAC TCAGTTGGGTATCAG 100 26
NtRootA1_40630 4462676 .. 4462716 - -31.5  -4.87273   AACAGGGCATAAAAA  CAGTTGGCGGCAGTGTTCA TGA TGAACACTGCCGCCAACTG  TATTTGCGGTGTTAC 100 49
NtRootA1_40610 NONE
NtRootA1_40600 NONE
NtRootA1_40590 4456318 .. 4456352 - -25.9   -4.8622   TTTGGCAAGGAAAAA     CCCACGACACGCCCA AAATA TGGGCGTGTCGTGGG     CAGAGTAAAAGCAAA 100 75
      dctA_2 4454611 .. 4454637 - -19.6  -3.12351   TTTGCGTACAGCCAA         TGCCCTCAAGAC GGC GTCTTGAGGGCA         TTGGCTGTACACAAA 100 49
        purD NONE
        purC 4450665 .. 4450721 -   -17  -4.35742   AGCCAACCACGAAAA CACACAAAA-AGCCCCGGACCAGT GGTGAACTTGA ACTGGTCCGGGGCTGTTTTG-GTG CAACTTAGGCGAACG 100 30
NtRootA1_40470 NONE
NtRootA1_40460 NONE
NtRootA1_40450 4439777 .. 4439803 - -15.1  -5.00616   TGTCCTTGCAAAAAA         GCCGCTCCGGT AATGA ACCGGGGCGGC         TTTTTTCGTCGGGAC 100 122
NtRootA1_40430 NONE
       aroQ2 4436773 .. 4436805 -  -6.2  -3.01712   TCGCCGTGGTCAAGA     CGCGGACCGGTTTCGC CGA GC-AGCCCGG-CCGCG     TAGCCATTCCGGGAC  49 365
NtRootA1_40370 NONE
NtRootA1_40360 4428938 .. 4428953 -  -6.8  -3.50869   GAGGATGTGAGAGAA              CACCTG CGTC CAGGCG               GCAGGATGTGAGAGA  60 52
NtRootA1_40310 NONE
         nth 4420949 .. 4420962 -  -3.7  -3.55622   GGCAAGGTCCTCAAA               CGCGG TCAC CCGGG                CCTCCTCTGTGATTC  51 17
NtRootA1_40290 4420247 .. 4420266 -  -7.1  -3.17723   CGACGGCGAACCGAA            GGGCTGCC TGAAC GGC-GCCC            GCGGCCGGAGCTGCT  56 39
NtRootA1_40250 4415826 .. 4415853 -    -7  -2.93073   CGGTTTCAAGAAGGA        CGGAGTC-CAACC GAC GGCTCTGACTCCG        GCGCCCAGCGGTGAA  53 82
NtRootA1_40240 4414390 .. 4414408 - -10.3  -4.07568   GTCCTCCTCGCAAAA             GTGCAGC GAGTT GCTGCAC             CAACACCACGAGGGA  80 235
NtRootA1_40230 NONE
NtRootA1_40220 4413079 .. 4413092 -  -2.3  -4.15044   GTTCCTTTCAAGAAA               GCCGA CAGG TCTGC                AGGGGTGAAATCGAC  59 155
NtRootA1_40210 NONE
NtRootA1_40200 4411995 .. 4412045 -    -6  -3.31144   GTGTTAGCGCCAGAA CCGTGCCGGATCCTTGCTCAGGGT GTG ACCCTAAAGGAGGACGCTTCACGG TTCGCCGCCATAGGC  54 50
NtRootA1_40190 4411663 .. 4411689 -  -3.6  -3.24329   CAGTCCCAACCAATA         CCGCCCCAGC TCCATTG GCTAAGGAGG         CGGCCCAGCCCGCGC  47 17
NtRootA1_40160 4407366 .. 4407383 -  -2.7  -4.59773   GTGCAGTTGGAAAAA             GAC-GCCA TCC TGGCCATC             ACAGTGGGCGCCAGA  68 93
NtRootA1_40130 NONE
NtRootA1_40120 4403901 .. 4403919 -  -2.4  -3.35934   CCATAGATTGCAGAA            TCCTGCG TTCTGG CGC-GGA             AATCCGAAGGGCTGG  46 49
      topA_2 NONE
NtRootA1_40100 4400481 .. 4400493 -  -3.3  -3.34192   AAGCCGGGGAAGCAA                CTTGG CGT CCACG                TTTCGCTGACAGGCA  47 65
NtRootA1_40090 NONE
NtRootA1_40080 4398410 .. 4398462 - -10.4  -3.02144   GGATGTCCGCCAACA GCACCGGTGGCCGGGGCGGG TTTTCCCCCATTT CCCGATTCGGCCGCCGGTGC TTTCGCATTTAATTG  66 50
        proC 4397280 .. 4397315 - -21.4  -2.70525   CGGCCGGAAACCAAG    GTGTCCGGACACGA-CA TGC TGATCGTGTCCGGACAC    GTCGATCTCTTGGAG 100 127
NtRootA1_40040 4393907 .. 4393923 -  -2.2  -3.01712   GGTGGTGGGTCAAGA              CCGGCT AGTCG AACCAG              GGATCCAGCCCGTAC  40 13
NtRootA1_40020 4392531 .. 4392551 -  -5.3  -3.14564   TCATGGTTGCACCAA            CGGAGGTAG GAT CTCCATCCG            ATGGGATTGTGACCA  49 155
NtRootA1_40010 4391066 .. 4391099 - -21.3  -3.18912   CCATGTAGGTAGCAA     TAGTGCGCGTTTTGA ACGT TCAAAACGCGCACTA      TTGCGACTCAGTTGG 100 51
NtRootA1_39990 4388866 .. 4388922 -   -29  -3.32997   CGCCTAGAAATGCAA CGCGGGGTCACTTACGGCCCAT-CCGG AAGG CCATCATGGGCCATAAGTGACCCCGCG TTGCTCTATCTTCCA 100 31
NtRootA1_39970 NONE
NtRootA1_39960 NONE
NtRootA1_39950 NONE
NtRootA1_39940 NONE
NtRootA1_39930 4381667 .. 4381709 -   -30  -4.58213   TAACCAACCACAAAA CGCCAAGGGCGGGGTCACCA TCA CGGTGACCCCGCCCTTCGCG TACTGCAATCCTGCT 100 49
NtRootA1_39900 4378264 .. 4378274 -  -2.4  -3.27298   TTCCGGAAGCAGGAA                 TGCG CGA CGCC                 GATGCCCACCTTTCG  45 211
NtRootA1_39880 NONE
NtRootA1_39870 4374919 .. 4374933 -  -7.2  -3.45054   TGCTACAAGCCACAA               TCTTGT ATT ACAAGA               TCTCAGCTTGTATAA  60 76
NtRootA1_39850 4373370 .. 4373411 - -28.1  -4.56597   GCGCGCGCGCAAAAA CCGCGCCCCAGGCGGATCA CGAA TGATTCGCCCGGGGCGCGG  TTCTCTTGGTGCGAC 100 87
NtRootA1_39830 NONE
NtRootA1_39820 NONE
NtRootA1_39810 NONE
NtRootA1_39800 4366902 .. 4366917 -  -4.6  -2.91264   CGTTGCATCCACACA              CCGCCG CTGC CGACGA               GCGACAACGTCACGA  46 218
NtRootA1_39790 NONE
NtRootA1_39770 NONE
NtRootA1_39760 NONE
        lipO NONE
        lplB NONE
        lplC NONE
NtRootA1_39720 NONE
        yesU NONE
NtRootA1_39700 4356544 .. 4356563 -    -5  -3.47841   ATAGCCACACCATAA            CCGCGGTTC GTC AAACCG-GG            CAAATTGGGTCCGTC  51 39
NtRootA1_39690 NONE
NtRootA1_39680 4354517 .. 4354544 - -12.7  -4.65895   GTTGGGATGCAAAAA        TGCCCGCCGCC TTGGAG GGCAACGGGCA         TTCACGCTTGGTGAA 100 317
NtRootA1_39650 4351879 .. 4351893 -  -2.7  -4.67982   CCGGACTCAACAAAA               GCCGG TACTT CCGGG               TAACAGAGTCCTCTG  66 45
         rex 4350741 .. 4350765 -  -8.5  -3.19668   CAGCAGGGAACGGAA          TTCCCCCCAGG CTC CCTGGAAGGCA          TGCGTGGCGGTCTTG  58 382
NtRootA1_39610 4349101 .. 4349135 - -14.4  -3.73224   GCAGTCCCGAGTAAA    CGGCGCCCCGTCACAG TTCCG CTGTG--GGGGCGCCG    TTTCGCGTACTCAGA  95 102
NtRootA1_39580 NONE
NtRootA1_39570 NONE
NtRootA1_39560 NONE
NtRootA1_39550 NONE
NtRootA1_39540 4343388 .. 4343412 - -12.2  -3.64703   GGCGCGCGACGGAAA          TCTAGCCGCG TCCAC CGCGGCTAAA          CGCCAGCGAGGCCGT  81 85
NtRootA1_39510 4341614 .. 4341636 -  -6.3  -3.63515   GCTCATGGCCAACAA          TGTCCG-GGA TATT CCCACGGACA           CGGCGGCCGGAAAAC  59 322
NtRootA1_39460 NONE
NtRootA1_39450 NONE
NtRootA1_39440 4335331 .. 4335341 -  -6.8  -3.05715   AAGGTGGTCAGTCAA                 GAGG TGT CCTC                 GCAAAGTCCGCAGTG  54 179
NtRootA1_39430 4333650 .. 4333684 -  -9.8  -3.61398   TCGCTTTGCGAACAA     CTCACCCCGGCGGCAG GGG CGGCGGCGGGGGTTAG     AGCAACTCGCCATCC  69 22
NtRootA1_39420 NONE
        nasD NONE
        nasE 4330356 .. 4330412 - -26.7  -3.37493   TCCTGAATACAGCAA CGCGGGGTCACTTACGGCCCATGTTGG CCG CTCAGATGGGCCGTAAGTGACCCCGGG TTGCTTCAGGGAATG 100 31
      ansP_2 4328625 .. 4328651 - -17.3  -2.74563   GGGACACGCGAACGA         CGGGTGCCCCC GGAAA GGAGGCACCCG         CCGTCGAGCGTTGGT  89 50
NtRootA1_39380 NONE
NtRootA1_39370 4327384 .. 4327395 -  -4.4  -3.01712   CCGTCCGGGTCAACA                GATG AAGT CATC                 TCCCCCGCAGCCCAG  46 49
NtRootA1_39360 NONE
NtRootA1_39350 NONE
      paaH_2 4324376 .. 4324405 -  -5.7  -2.52676   TATGGGTTCAATCGA       GGTCAC-CCGGTTA GCC TAACCGGTGTGGTC       AGTCGTTCCAGTCGA  45 24
NtRootA1_39330 NONE
NtRootA1_39320 4323135 .. 4323147 -  -3.3  -3.53091   AGTCCGCCTGCGAAA                GCCAA GTT CCGGC                GTCGTGCTCGATGAG  49 195
NtRootA1_39310 4322201 .. 4322256 - -35.2  -3.14132   GCCGGCTTGCATGAA CGTTGTGAACCCGCTGTTTCGTTGTT GGGC AACAACGAAACAGCGGGTTCGCAACG TCCTAGTGGTCTAAC 100 36
NtRootA1_39230 4313851 .. 4313866 -  -6.8  -2.62184   CCTTCTCTCACATCA              CCGCAGC TTG GC-GCGG              ATCGCCGCCACTTCT  50 7
        paaZ 4311460 .. 4311516 - -37.7  -3.45571   CCCGCTAAACAGCAA CGCGGGGTCACTTACGGCCCATGTT TGCTGTG AACATGGGCCGCAAGTGACCCCGCG TTGCTTCTAAGTTGG 100 43
NtRootA1_39170 4305073 .. 4305113 - -27.8   -3.9279   ATCCAAGCCCATAAA  CGCGAAACGCTTCCCCGC CCAAT GCGGGAAAGCGTTTCGCG  TTTGTTGACTTGACG 100 42
NtRootA1_39130 4301552 .. 4301580 - -11.7  -2.79327   GGAGGGGATCGAAAC        CGCCGAGCAGGCA GAC TTCCTGCTCAGCA        TCGGGTGCACCAGCG  66 186
NtRootA1_39100 4298726 .. 4298757 - -18.8  -4.63932   CAGTCCGCAACAAAA      CTGATGCCCCGAGC AATG GCCCGAGGCATCAG       TTTGAGTCATGTGGC 100 62
NtRootA1_39080 NONE
NtRootA1_39070 4295044 .. 4295069 -  -2.4  -3.28712   GGTTGCCCTGCACAA         GGGCGACGTG ACAGCA CGCATCGCTC          TGTGGTCGCACACGG  45 417
NtRootA1_39050 4293536 .. 4293549 -  -3.7  -4.05446   CTTTGGAACGACAAA               CGCCC GGAA GGGCT                GGATTGACGTTCTCG  61 297
NtRootA1_38980 4283024 .. 4283064 - -20.5  -2.82623   TCCTGCCGACAACGA  CGTGGTAGACCCCTACCGC CGA GCGGAAGAGGTCTACCACC  AGATGGAGGATGAGT  91 110
        paaA NONE
NtRootA1_38950 NONE
NtRootA1_38940 NONE
        paaD NONE
        paaE NONE
NtRootA1_38910 4277489 .. 4277499 -  -2.4  -4.08945   ATTACCCCTTGAAAA                 CCGG CGC CCGT                 TTCTCCTGGAAGGCC  56 1
NtRootA1_38900 4275863 .. 4275888 -  -3.1  -4.58283   CAACGGCCCTAAAAA         CCATCCGTCGC TAAC ACGTCGGTTAG          AAGGAGATGAATACA  69 44
NtRootA1_38880 4274406 .. 4274421 -  -4.6   -2.7464   AAGGGATTTCTAAAT              CTGTCC GCCC GGACCG               CTATCCTCCACTTCA  44 4
NtRootA1_38870 4273450 .. 4273463 -  -6.7  -3.38072   GCGACGCAAGATTAA               CGCAA GCGC TTGCG                AACCGGATCCTAACT  56 48
NtRootA1_38860 NONE
NtRootA1_38850 4270909 .. 4270925 - -15.1  -3.02144   CGATCGGGTTGAACA              GCCGGCC AGG GGCCGGC              ACCACCGTGACGGTC  81 425
NtRootA1_38820 4268644 .. 4268673 - -18.7  -5.93809   TGCCCACAAAAAAAA       TAAGGCCGCGCCA CCAT TGGCACGGCCTTA        TTGTGAAGTTTTGTC 100 39
NtRootA1_38810 4268172 .. 4268201 - -16.5  -2.67289   AGTGGAAAGAGGAAC       GGGTGGGTGGG GCCACCAA CCCACCCACCC        TGATACCCTCCCTGA  85 47
NtRootA1_38800 NONE
NtRootA1_38790 NONE
NtRootA1_38780 NONE
NtRootA1_38770 NONE
NtRootA1_38760 NONE
NtRootA1_38750 4262274 .. 4262288 -  -4.2  -2.90709   ATAAGAGCAGGAAAG               GGTGCA AGG TTCACC               TCAAAACTTCAAGTC  44 26
NtRootA1_38740 NONE
NtRootA1_38730 4260346 .. 4260356 -  -2.4  -4.63527   CGACTACGTTAAAAA                 GCCG TTC CTGC                 CACGCGAGCTAAGGG  68 474
NtRootA1_38710 4258077 .. 4258087 -  -6.8  -2.58822   GCCGTTATAGAAGAT                 GCAC TCG GTGC                 GGTAAGTACGACCGC  50 77
NtRootA1_38700 4256575 .. 4256603 -  -5.2  -3.14132   CGCGGGCGGCAGGAA       GGTCGGATCGCGG TTCA CCACCACCCG-CC        GGATCGGACCCAACG  48 352
        yraM NONE
NtRootA1_38650 4251522 .. 4251565 - -15.2  -2.78384   GCGTTGCCGACGACA TGGCAGAGGCGGAGCCACCC TGTC AGGTGGCCCCGCCTCTGGTG CGTTGGGATTATCCA  83 142
NtRootA1_38640 NONE
NtRootA1_38630 NONE
NtRootA1_38620 4249350 .. 4249384 -  -4.2  -3.98204   AAAGAGATCGAGAAA    TCGC-CGGGTATCCG GTTTAT CGACTACCCGGGCGG     AGCCCCCTTGGCCGC  61 160
NtRootA1_38600 4247802 .. 4247839 - -25.7  -2.52543   ACTTTGGTCAAGTCA   GGGCAGGTGCTTTCCGG TTTC CCGGCAAGCACCTGCCC    TCCTGAAAAGACGTA 100 55
NtRootA1_38590 4246365 .. 4246375 -  -6.8  -3.57648   CAATTGAAAAACACA                 CTCC CCT GGAG                 GATAGCTTTAGTCGC  60 440
NtRootA1_38450 4228731 .. 4228750 -  -4.2   -2.7644   AGCGAACCCGTAAAC            GGGGC-TGG CAA CCATGGCCC            CTACACCCGTGAAGC  43 77
NtRootA1_38440 4227315 .. 4227333 -    -3  -2.62184   GGGCGCGCTACAGGA             GGTGCTGT GTC ACAGCTTC             TGCACGTTGTGGCGG  40 229
NtRootA1_38430 4226698 .. 4226722 -  -6.4  -4.24342   GCGCTGACCAAGAAA         CGACCGCGGCC GAGC GACCACG-TCG          CGGCGGGAAGGGTCC  69 352
NtRootA1_38410 NONE
NtRootA1_38400 NONE
NtRootA1_38390 4221726 .. 4221738 -  -6.2  -3.78778   TGATCAGATGAAGAA                GCGG TTCTT CCGC                TCAGTTCGATCCAAC  61 1
NtRootA1_38360 NONE
NtRootA1_38350 4216459 .. 4216478 -  -3.4  -3.57462   GACCGCATGCTCAAA            CCGATGGG TAAG CCCAGCCG             TGTCCCCCGCCGCGT  51 224
NtRootA1_38330 NONE
NtRootA1_38320 NONE
NtRootA1_38310 NONE
NtRootA1_38300 NONE
NtRootA1_38290 4209925 .. 4209953 - -19.6  -3.71848   GCTGTGGATCAACAA        CCGCGTCCGGGC GGAGT ACCCGGACGCGG        TAAAGCCTCTAGAGA 100 34
NtRootA1_38280 NONE
NtRootA1_38270 4207856 .. 4207867 -  -4.4  -2.87274   TTTGACAAGCAATCA                TACC AACG GGTA                 ACGTCAAGGCCCGCC  46 70
NtRootA1_38260 4206100 .. 4206131 - -13.8   -3.4072   CATTGTGGATCACAA      CCTAGCCGAAAAAG TCAC CTTTTCCGGCTGGG       TGGACACTAAGACGG  79 439
NtRootA1_t00540 4204043 .. 4204054 -  -2.2  -3.28497   CCAGTGGAAAGCGAA                GCTG AACT CAAC                 CAGGCTATCGCCCGC  45 325
NtRootA1_38190 NONE
NtRootA1_38180 NONE
NtRootA1_38170 4192746 .. 4192782 - -17.4  -3.96624   GATTTGCACCACAAA    GAGCAGGACCCCGATC ACCTG AATCGGGGTCCTGCTG    CGTGGCCGTCGTTCT 100 46
NtRootA1_38160 4190123 .. 4190138 -  -8.2  -3.30124   GCCCAGCTGGGAGAA              GCCGGA ATGA CCCGGC               GGCAGGTGAACCCGG  59 49
NtRootA1_38150 4189158 .. 4189173 -    -4  -3.48474   CAAATTTATAAGGAA              CCTTCA TTTA TGAAGA               AGGATAGAAGCCAGT  51 17
NtRootA1_38140 4187742 .. 4187764 -  -9.1  -3.53761   CAAGCCTCCGGCAAA           GCATGTGCC GATCA GGCACCTGC           GAATTGTCGAGTTCA  65 140
NtRootA1_38110 NONE
NtRootA1_38100 4184584 .. 4184612 -  -4.5  -3.36991   GACCAGCCTCAAACA       GGGT-CCGGAAG CAACGT CGCCCGGTACCC        CAACCAAGAATTGGA  51 43
NtRootA1_38040 4179793 .. 4179814 -  -4.3  -3.41134   ACACTCATCAACCAA           TGGCATCGG CCCT CCGATGTCG            TAGCCGCCTTCCTCG  51 375
NtRootA1_38010 NONE
NtRootA1_38000 NONE
NtRootA1_37990 NONE
NtRootA1_37980 4170831 .. 4170860 -  -4.1  -3.72893   CACGGCGCCATGAAA       CTGCTC-GACGGCG TGT CCCCGGCTGAGCGG       CCCACGGCCATCATG  56 455
NtRootA1_37950 4168243 .. 4168257 -  -6.4  -3.31263   ACGCTATGTGGACAA               CTCGGA CGT TCCAAG               AATCCGTACACTTGG  55 441
        menC 4167089 .. 4167099 -  -4.6  -2.63079   CTTCCAGAGAATGTA                 CGAG GTT CCCG                 CTGAGCCTTTCAGCG  43 68
NtRootA1_37920 4164923 .. 4164965 - -21.4  -2.52896   GCATCGGGGAAGGCA GAAACGCTCCCCTGCTTGGA GAT CCCAGGCAGAGGAGCGTTCC GGGGTAAGTGTTACT 100 36
        menD 4154608 .. 4154645 - -24.3  -3.64703   CTGGCGCCACGCAAA   CGGGAGGGCGACACC TTTATGTG GGTGTCGCCCTCCCG    TTTCTGTGTCCTCTA 100 243
        menG 4149677 .. 4149702 -  -3.9  -2.94232   GTCGTCCTAAATAAG         TGGCACGTCAGC TGG GCTGGC-TGCCG         GACCGGCGCGGCTTG  44 7
NtRootA1_37790 NONE
NtRootA1_37780 4146766 .. 4146801 - -17.6  -2.78712   CTTGCAACCCAAGTA    GCCACCGGCGTCGTGA ACTA TCACCACGCCCGTGGC     GTCCTGACCCTCATT  84 429
NtRootA1_37730 4142802 .. 4142818 -  -2.9  -3.56594   GCAAAGGTCCGGAAA              CGCTAAG TCA CCTAGGG              AAACATTTCGTCACG  49 114
NtRootA1_37720 NONE
        cysH NONE
NtRootA1_37700 NONE
        cysN 4137857 .. 4137913 - -31.9  -5.26875   CGCTCAATGAAAAAA CCGCAGCTTGTTCGAAATCCCCGCCGT ACA AGGCCGGGAATTTCGAACAAGCTGCGG TCTATCTGACTCTTC 100 45
NtRootA1_37680 4136787 .. 4136802 -  -2.4  -4.06491   TCAATCCCACAGAAA              CCAACG TTCA CGCAGG               GTCACGTGACGTCAT  56 90
        ssuA NONE
NtRootA1_37660 NONE
      ssuC_3 4133655 .. 4133711 - -29.7  -3.66908   GGCCCCCAAAAGCAA CGCGGGGTCAGTTACGGCCCATGTT TGGCTTC AACATCGGCCGTATCTGACCCCGCG TTGCTTTAAGAACTA 100 45
NtRootA1_37640 NONE
NtRootA1_37630 4131431 .. 4131468 -  -6.1  -3.53224   GAGGTCCTGGTCAAA   CTCGCCGAGGGATTCGA AAAC CCCCATCCCTCGTCGCG    ACCGCGGACAGTGCC  55 521
NtRootA1_37600 NONE
        glsA 4124733 .. 4124743 -  -4.6  -5.00616   GCGTGCCGCAAAAAA                 CGCG TGC CGCA                 AAAAACCCAAGCCTC  80 40
NtRootA1_37580 4123254 .. 4123301 - -10.6  -3.33815   AGTCCTCCCAACTAA GTAGCAGCTGTGCGCGTTTTGA GGGC TCAAAACGCGCTTAAGTGCGAC CTAGTTGGGTAAGGG  69 44
NtRootA1_37570 4121442 .. 4121453 -  -3.6  -4.08767   GTCAGGGCCGTAAAA                CGGC CGGT ACCG                 GTCCCGGGTAGAGGT  60 322
NtRootA1_37560 NONE
NtRootA1_37550 4118393 .. 4118408 -    -4  -3.76373   GGGCCAACAGCGAAA              TGT-CCG GCG CGGCACA              GCGTATGTACTTGGA  56 513
NtRootA1_37510 NONE
NtRootA1_37500 4112320 .. 4112350 -   -27  -2.52464   CCGCCCGTTAACGCA       CAAGGAGGGCCGGG AAT CCCGGCCCTCCTTG       TATACAGCGTGAGAA 100 43
NtRootA1_37490 4111359 .. 4111369 -  -6.8  -3.05384   CTTCGGCTGAGGTAA                 TCCG GTT CGGA                 TACGCCCGGTCGGCA  54 168
NtRootA1_37480 4110509 .. 4110523 -  -5.7  -3.32022   CCCGGTATATATCAA               GCTGT TTGTG ACAGC               TGGGTGGTTTTTCTG  51 7
NtRootA1_37460 4107561 .. 4107576 -    -4  -2.73542   GGTAATCCGCAATGA              CAGTGCG CTG CGCA-TG              TGCTGGCGGCACAGT  43 134
NtRootA1_37450 4106180 .. 4106197 -  -5.5  -3.03243   AGCTACGTTGCAACA             GTGTGAG TCAG CTCACGC              TGTCAATTCCGTGTC  49 20
NtRootA1_37440 4104527 .. 4104553 -  -2.9   -3.1247   ATGGTGCACAGCCAA        TGCCCCT-TGCG AACG CGATGAGGGGCA         TCAGCTGTGCACAAA  43 44
NtRootA1_37430 NONE
NtRootA1_37420 NONE
NtRootA1_37410 4101224 .. 4101267 - -18.3  -3.14931   TCGAGCGCCCAGGAA CACCAAAAGCGCCCGGGAA TTGATG CTCCCGAGCGCTTTCGATG GTGATTCAAGCCAGC 100 66
NtRootA1_37360 4096156 .. 4096166 -  -8.2  -3.18264   TTCTGTATCGATTAA                 CGCC GAC GGCG                 GTCGCCGTGTTCCGC  59 81
       htpX2 4095228 .. 4095249 -  -7.9  -3.14564   TTAGGCGTTGAGTAA           GCCGCGTCC TTAG GAAAGCGGC            CGCCCAGCCATCCGT  57 13
NtRootA1_37300 4090274 .. 4090285 -  -4.4  -4.19238   TGCCGAACTTCAAAA                GAAG ATCA CTTC                 CGGAGACCGTTTCTT  64 131
NtRootA1_t00530 4090143 .. 4090168 - -19.1  -4.66833   CTCGAACGCGAAAAA         TCCCCGGAACC TGTT GGTTCCGGGGA          TTTCCCATTGGGTGG 100 36
NtRootA1_37270 4088116 .. 4088129 -  -2.3  -2.53876   GCGTACGGCAATTCA               CCGAT AACG AACGG                CGCTGATTGGGGAGC  37 129
NtRootA1_37230 NONE
NtRootA1_37220 4083233 .. 4083268 - -29.2  -3.55622   GGGAACGCCTTTAAA    CATCGAGGCCGCCGGA ACTC TCCGGCGGCCTCGATG     TGCTTCCGGCGATTT 100 54
NtRootA1_37200 4081075 .. 4081131 - -29.1   -3.8512   TACCGATGACAACAA CGCGGAGTCACTTACGGCCCATA AACGTCGTCAA CATGGGCCGTAAGTGACTCCGCG TTGCATTTAGAGGTG 100 32
NtRootA1_37190 4080024 .. 4080080 - -31.9  -3.37344   CGCCCACTGAAGCAA CGCGGAGTCACTTACGGCCCATGTT TGCCCTC ACCATGGGCCGTAAGTGACCCCGCG TTGCTTATGGCGAGC 100 30
NtRootA1_37170 NONE
NtRootA1_37160 NONE
        metB 4075849 .. 4075878 -  -2.2   -3.9461   GTGGGTGAAGAAGAA      GCCACAGTGTCAGC CGTT GCTGAT-CT-TGGC       GAAGGCCTGCTCAAG  56 5
NtRootA1_37140 4074431 .. 4074441 -    -4  -2.74598   GGACAAAGTACATGA                 CTTT TCT AAAG                 AAAGCCACGCTCGCT  43 148
NtRootA1_37130 NONE
NtRootA1_37120 4072247 .. 4072267 -  -8.9  -4.26903   GGGAGGCCATCAAAA            TCGCGCGGG AGG CCCGCACCA            TCCTGGGCGGCAACG  79 226
NtRootA1_37100 4069272 .. 4069289 -  -7.7  -2.90688   GAACGATTCCAGACA             CCGGGTT TCTC AACCCAG              GTCATGGGCGTGGCT  53 473
NtRootA1_37060 NONE
NtRootA1_37050 NONE
NtRootA1_37040 4062960 .. 4062981 -  -7.2  -4.25104   CTCTCCCTATGAAAA           TGCCCGCA CACATT TGCGGGCC            CCAACACTTACCAGT  71 222
        deaD 4060531 .. 4060568 - -21.3  -2.84602   TTGAGGGGATTAAAC   GCCACAGGGGGCCGGCT CGAA AGCCGACCCCCTGCGGG    AACTACTTACTCTTT 100 39
NtRootA1_37020 4059666 .. 4059694 -  -7.3  -4.61527   AAAACCGGGGAAAAA        CGGCGCCGACACA ATT TGCGCAGACGCCA        TTTTCCTGATCCAGA  79 52
NtRootA1_t00520 4059484 .. 4059519 - -20.6  -4.99861   CACGAATGAGAAAAA    CCTGTGTCAAGCCGGT CAAA ACCGCCTTGACACAGG     CCCTCATTCAGAGCC 100 34
NtRootA1_t00510 4059361 .. 4059387 - -18.8  -4.55128   ACGGGCAAACGAAAA         GACCCCGCAGAT GAT ACCTGCGGGGTC         TTGCTCTGTAGCGGT 100 33
NtRootA1_37010 4058576 .. 4058623 -  -6.5  -3.28712   CCCGCTTCCCCAGAA GTT-GTACG-AGCTTTCCCCAGGC CTG GCCTGCGG-AAGCTACCTACCAAC CTATCCCGGGGTCCA  54 57
NtRootA1_37000 4056575 .. 4056598 -  -3.7  -3.55801   ACGAAGCTTCGGAAA          CTTTGCGGG GATGAT CCCGCAGCG           CTGACAGCAGAGATG  53 413
NtRootA1_36980 NONE
NtRootA1_36970 NONE
NtRootA1_36960 NONE
NtRootA1_36950 NONE
NtRootA1_36940 4049480 .. 4049535 - -27.2  -3.17075   GCTGTCGTAACCCAA CTGAGTCGCAGCTGAGCGCGTTTTGA ACCC TCAAAACGTGCTTAACTGCGACTCAG TTGGGTTTAAGGGAT 100 32
NtRootA1_36890 4044178 .. 4044210 - -11.2  -2.53263   GGTATGGCCAAGGCA      CCACCCCGGGCATG ACGCG CAGGCCCAGGGTTG      AACCCGGGGCCAACG  65 125
NtRootA1_36880 NONE
NtRootA1_36870 NONE
NtRootA1_36860 NONE
NtRootA1_36850 NONE
        murB 4040971 .. 4040992 -  -5.8  -4.20516   CTGCTACTCAACAAA           GTCCTGCC CATCGC GGCACGAC            GCACACGCTAAGCCC  66 62
NtRootA1_36820 4039036 .. 4039091 -    -3  -3.67597   CCTGCCAGCTAACAA CGTCGTGGGCCCGCTAACCCGTTGTT GGCA AACGACGCAGGAGCGGGCAGGCAACG AGATTGCGGGCAAGC  52 229
NtRootA1_36800 4037204 .. 4037225 -  -6.5  -3.53761   CAAGGTTGTTCCAAA           CACCAAGGA AGCC TCCATGGCG            GACCTGACTCCTGTG  57 220
NtRootA1_36710 4028027 .. 4028057 -    -6  -3.65084   AACGAAACCCGCAAA       CCACGCCATGGCAA TGC TTGCCAGGCCAAGG       AGAACGAGGAAGAAG  61 80
NtRootA1_36700 4027353 .. 4027364 -  -2.2  -3.72576   GCCGGCGTCAGGAAA                CCCT GTGC AGGA                 ACGCTGATGCGTGTG  51 6
NtRootA1_36690 NONE
NtRootA1_36680 NONE
NtRootA1_36670 NONE
NtRootA1_36660 4023180 .. 4023195 -  -6.8  -3.14211   ATTGCTGCCCACGAA              GCCCTGG CCG CC-GGGC              TGACACTCCAGTGGA  53 143
NtRootA1_36600 NONE
NtRootA1_36590 4016084 .. 4016097 -  -8.1  -3.56704   CGTCGACGAAATGAA               GGTCG CCTT CGACC                GCCGCCGCAAGGCAA  65 521
NtRootA1_t00500 NONE
NtRootA1_36570 4014444 .. 4014462 -  -2.4  -4.44974   GCAAACCCCACAAAA             TTCCTAAA GTA TCAAGGAA             TTTCGTACGGTTTAC  64 53
NtRootA1_36560 4013427 .. 4013446 -  -4.3  -3.01712   GTCCTTCTCTCAATA            GCTTCCTG GGACA CAGGA-GC            GCGTCCCAGGTTTGT  44 115
        rplK 4012884 .. 4012911 -  -6.3  -3.28712   TGGGCCCTGCCACAA        GTCG-TGGATCC GGCAA GGATCCTGCGAC        ATTTCAATGTTTCAG  54 88
        rplA 4012065 .. 4012093 - -23.9  -4.86001   ATGAGTGCACAAAAA        GGGACCGCCCGGC AAT GCCGGACGGTCCC        TTTTAGAGTTCGTAC 100 50
NtRootA1_36530 NONE
NtRootA1_36520 4009486 .. 4009509 - -11.6  -5.10154   AGCTAAAACTAAAAA          CGCCCCGCGC AGAT GCACGGGGCT           TGGCTCAACGCAGTT 100 250
        rplJ 4008792 .. 4008805 -  -2.3  -3.32343   TGCAGATCCGGACAA               TGCCG CTCC CTGCA                CCAGAGTTTGATTGG  44 50
        rplL 4008329 .. 4008362 - -26.1  -2.90496   TTGCTTGTTAAAGCA     GGAAGCCCCGCCCGG TGAA CCGGACGGGGCTTCC      AAAGCAAGACGAGTT 100 39
NtRootA1_36460 4004914 .. 4004924 -    -4  -3.77087   CAGGGAAGACGCAAA                 TATC TAC GATA                 CGGCAAAGTAGCCTT  54 91
        rpoB 4001146 .. 4001197 - -12.3  -3.05844   TTGGTTACGGGAAGA GGGAGCTGTTCCGGTGGACAG TGACGTACTG CTGCCCACCGGAACGGCTACT AGACCTCTTCTACGG  73 24
        rpoC 3997180 .. 3997201 -  -4.3  -3.18264   TCCTTCAGCCATTAA           CTACTGCTG GTTT CAGCGGAAG            TCGTTGCCGAGATCG  47 16
NtRootA1_36430 NONE
        rpsL NONE
        rpsG 3995948 .. 3995983 - -18.2  -2.80816   TTCGGATGGACTACA    CGTTCGCCGCCGGCTC GGTT GAGCCGACGGCGCCCG     GGAGGATTTACCAGC 100 33
      fusA_2 3993695 .. 3993705 -  -5.4  -3.27297   ATTCAGGAACCAATA                 CTAG TTC CTAG                 AGCCTGTTCGCGCAG  51 127
         tuf 3992296 .. 3992337 - -19.7  -3.55889   ATAGATTAATGATAA CAAAGAAGAACCCCACCAC ATAA GCGATGGGGTTCTTCTTTA  GCTTGCTACCGGCGA 100 72
NtRootA1_36380 NONE
NtRootA1_36370 3987655 .. 3987672 - -10.5  -2.62983   CTGACTGCTACAGGA             CCCGGCG GCAT CGCCGAG              GACGTTGAACTCCGC  59 229
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW 3984120 .. 3984130 -  -2.4  -3.53224   TATTTCCTCGTTAAA                 GTGG TCT CCGC                 TACGCGAGCGGACCG  47 25
        rplB NONE
        rpsS 3982952 .. 3982987 -   -14  -3.01712   TTCTCTCGTCTAAGA    CGTAAAGTCAGGCGCC TAGC GGCGCTTGCCCTTACG     GTCGTCCTTAACATG  77 5
        rplV NONE
        rpsC NONE
        rplP NONE
NtRootA1_36260 NONE
        rpsQ 3980480 .. 3980496 -  -6.5  -3.61774   CAGAACAGGCCTAAA              CGCCCGT GCC ACGAGCA              TCAGCTTCCCTTGCA  58 243
        rplN 3979996 .. 3980008 -  -4.7    -3.767   TAGCCATGGACTAAA                GCACC TCC GGGGC                CAGCGAAACGATCTT  56 8
        rplX NONE
        rplE 3978996 .. 3979041 -  -2.9  -3.28791   AGCCCTTCCTCATAA CGGTTTCCGCTGCGCCTGCTC TTGC GAGCCTGCGCTGCCGGACCTG TTACGTAGTTAGTTT  45 34
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO 3976169 .. 3976204 - -25.6  -5.08824   CCTTCACGCAAAAAA    TCCCGGTATACGGGGC CGAA GCCCCGCATACCGGGA     TCTTTTTTACAACGG 100 60
        secY NONE
       adk_1 3974085 .. 3974129 - -28.1   -2.7264   AAACTGCCGCGAAAC GAAAAGGGTGTGTCCCGCACC AAT GGTACGGGACACACCCTTTGC TCCAGCGCCGATGAT 100 63
        fabH NONE
NtRootA1_36120 3972210 .. 3972220 -  -4.6  -3.08032   CTCCCTCGAAAATCA                 CGGC GTC ACCG                 GATGTCCACGTGCTC  47 20
NtRootA1_36110 NONE
NtRootA1_36100 NONE
NtRootA1_36090 NONE
       map_3 3967391 .. 3967425 -  -5.4  -3.06183   TCCACCTCGAGGCAA     CGCCCTGAGCCTGCGC AGC ACGCCGGGCCGGGCCG     GGAGCAGGCTTCGCT  49 44
NtRootA1_36070 3966234 .. 3966263 -  -2.2  -4.38203   CAGACAACCAACAAA       TAACTCTAC-GCC AATGG GGCCGGAAAGTTA       AATCCGTCCATGGTA  62 60
        infA 3965543 .. 3965561 -  -8.8  -2.80816   GTCGTAGGCAGTACA             CCCACACG ATC CGTGTGGC             CCCAGCCTCCGACCG  58 345
        rpsM 3965105 .. 3965126 -  -3.7  -3.08211   ATCGGGGGAAAACCA           GGTCAATCC CGAG GGATTAACG            TCCGGCCTTCTTCTT  45 20
        rpsK 3964671 .. 3964686 -  -4.6   -2.7898   GGGAATACCTAATTA              GACGCG GCGG CGCTTC               GGGGGGCGGCAACCG  44 7
        rpoA 3963464 .. 3963494 - -16.3  -3.05384   TCTCCTGTTATGTAA      GCCGGTCAGGTCCA TCGC TGGACCTGAC-GGC       CAAGATCTGCTTTTT  88 39
NtRootA1_36020 3962804 .. 3962833 -   -20  -4.70659   GCGGACACGCAAAAA       CCCGCCGCCCCC CAAAGC GGGGGCAGCGGG        TTTTCGTTCGTTCAT 100 73
NtRootA1_36000 3961878 .. 3961912 - -11.2  -2.58544   GTGGACGGCCACAAC     GGCCCCCTTCCGGTAC CCA GAGCCGGGAGGGGGTC     CTCCAATGTCCGGGC  66 71
        rplM NONE
        rpsI 3952475 .. 3952518 - -21.8  -3.57561   GGGCAACTTCTTAAA CGGCGAAAGCCCGCCCCGCCG AAA CGGCGGAACGGGCTTTCGA-G TAAGAGCAGATTAGC 100 36
        glmM 3950916 .. 3950974 - -19.2  -3.53444   GCAGGTCCTTTTAAA CCAGCTCGGCCCGCTCTCCTGATTACCAG TAAA CAGGTAATCAGGAGAGCGGGCCGAA--G- TTGCTTGGATTCTTA 100 38
        glmS NONE
        acpS NONE
NtRootA1_35830 3945013 .. 3945023 -  -5.4  -3.31144   TGGTGATGCGGATAA                 CTTG CTG CAAG                 CCTACTCATGACCCA  51 58
        glgX NONE
        treY NONE
        treZ NONE
NtRootA1_35790 3937287 .. 3937320 - -11.8  -3.10522   ATTGTAGCCAACACA     GAAGGGG-CCGCC TTTGTTCCC GGCGGGCCCCTTC     CCTAATGTGTCAGTT  73 48
NtRootA1_35780 3936013 .. 3936069 - -18.2  -3.51411   ACCCTCTTAAAGCAA CGCGGGGTCAGTTACGGCCCAT CCGATGGTCAAAC ATCGGCCGTAAGTGACCCCGCG TTGCTTGTGCTGTTG 100 45
NtRootA1_35750 3931966 .. 3931976 -  -8.2  -2.52795   AATGTGCCCAATTCA                 CCGG TCG CCGG                 TTCGTCGGCAAATGC  53 352
NtRootA1_35730 3929721 .. 3929737 -  -5.1  -2.52464   CTGCTTCGTAAGTCA              CCCTAGA GAT TCTAGTG              GTGCCGGGGAACGGG  43 60
       alr_2 NONE
NtRootA1_35710 NONE
NtRootA1_35700 NONE
NtRootA1_35690 NONE
        tsaD 3925255 .. 3925268 -  -4.5  -4.25256   CGTCCAGGAAAACAA               GTGGCG TGC CGCC-C               GCTATGGCATGGAAG  66 299
NtRootA1_35650 NONE
       rpmJ2 NONE
NtRootA1_35630 3921957 .. 3922005 - -15.4  -3.72241   CACCAAGCACGCAAA GACGGCCACCCTGGTCCTCACCA GGAT TGGCGAGGAA-AGAGTGGCCGTG GTTGTGGAGCCCGTG  95 56
NtRootA1_35610 3920107 .. 3920121 -  -5.6  -2.53759   AAGAGGCTTAATCGA               GACCGA CAC TCGGAC               TCTCCTTTTCATGAG  45 211
        groS 3919760 .. 3919807 - -21.4  -4.67943   TTTCAAGACAGAAAA CCCGCACCGCAG-AGGGTCGGAA TAA TTCCAACGCGGCTGCGGTGCGGG GCTCCAGGAAGTTAC 100 37
       groL1 3918081 .. 3918104 - -14.6  -5.26918   AGAGGGCAGAAAAAA          GCCCTGGCCA CGAG TGACCAGGGC           TTTTTCGAACAGGCT 100 42
NtRootA1_35580 NONE
NtRootA1_35560 NONE
        noxC 3914342 .. 3914388 - -13.5  -2.82208   AAAGCATCCATCATA CGCTGTTCCGGGCGCCGGCCC CAGTC GGGCCGGCCTGCGGAACCGCC TTACGAGTGTCTATT  76 122
NtRootA1_35540 NONE
NtRootA1_35530 3909943 .. 3909971 -  -7.4  -2.52543   AGGGGTTGCAACTGA       TGACCAG-CCCGT CATT ACGGGACTGGCCT        GTGCATAAAATACGG  50 205
        guaB 3908337 .. 3908368 -   -21  -2.60496   GCGGCCCTTAAACAG      CTGTTCCCCGCGGA CAAG TCCACGGGGAACAG       TAGTGGTCAGCGGGA 100 32
NtRootA1_35510 NONE
NtRootA1_35500 NONE
NtRootA1_35490 NONE
        fruB NONE
NtRootA1_35470 NONE
NtRootA1_35460 3901325 .. 3901337 -  -6.2  -3.04144   TCCTGATGCCTAACA                GGCG GCCTT CGCC                GCGGCTAGTAGCGCT  52 30
        guaA 3899591 .. 3899624 - -22.5  -3.95378   TCACAGCTGAAAGAA     CAGTGGCCGGCCTCC CAAG GGAGGCCGGCCACTC      AGAATGCTATTCCCA 100 32
NtRootA1_35440 3895052 .. 3895080 -  -7.4  -4.58466   CCCACAAGCAGAAAA       GCTTGCC-GGCGC ATCA ACGCAAGGCAAGC        TTTTCTTTGTTTTGG  83 113
NtRootA1_35400 NONE
NtRootA1_35390 3891313 .. 3891341 -  -3.8  -3.53091   ATGCCTCTGCTGAAA       CAG-CGGCTGC CTGGACCT GCTGCCGTCTG        TTCCGAAGAACGTAA  51 210
NtRootA1_35380 NONE
NtRootA1_35360 NONE
NtRootA1_t00490 3889422 .. 3889439 -  -6.9  -2.63301   CACACGGCTACACCA             TGGCGGA TACC TCCGCCT              TCCACCCCGAAGCCA  48 150
NtRootA1_35320 NONE
NtRootA1_35310 3886771 .. 3886809 - -10.3  -3.06831   TGAACCCCCAGTGAA  GATGGACG-GGACGCCTG ATCT CAGTCGTCATCGTCCACC   GGTACCCGTGGCTCC  66 7
NtRootA1_35300 NONE
        crcB NONE
        bfrB 3885358 .. 3885390 - -21.3  -3.17075   GCTTTGGCAATCGAA      GAGGCCGCCGGAAGC TGA GCCTCAGGCGGCCTC      GGGAATGCTGTGGGC 100 64
NtRootA1_35260 3883760 .. 3883771 -  -7.2  -2.87931   TTCAGCGGCGATACA                GCGG TGTC CCGC                 CGGATCTATGAACTT  53 490
NtRootA1_35220 3880827 .. 3880837 -  -6.8  -3.14132   CCGCTTCCCGAGTAA                 GCCA GGC TGGC                 TCCCGGATAATCACG  54 42
NtRootA1_35180 3876714 .. 3876734 - -15.4  -2.96216   CCGCAGGAGCACACA            CGGCCGCG TTCCT CGCGGCCG            GCGCAGGAGAAAACG  79 473
NtRootA1_35160 3874866 .. 3874878 -  -4.7  -3.19175   GGCGAAGACATCCAA                CCGGG CCC CCTGG                CCTATCTGGGTGCCG  48 343
NtRootA1_35140 NONE
NtRootA1_35130 3871762 .. 3871777 -  -4.7  -3.07443   TTACAGCGTAGCCAA              GCCAA TGGGCT TTGGC               TAGGTCTTTTTGAAG  47 47
NtRootA1_35120 NONE
NtRootA1_35110 NONE
NtRootA1_35100 NONE
NtRootA1_35090 NONE
NtRootA1_35080 NONE
NtRootA1_35070 3866690 .. 3866746 - -11.6  -2.56095   TTGAGACTTAACTCA CATGTACGACGACGGCGGCGACAGCCCC GCG AGGG-T-CCGTCACCGCCGTCGTACGCG GTTTGCGTAAGCGCT  66 39
NtRootA1_35060 NONE
NtRootA1_35050 3864441 .. 3864458 -  -3.4  -3.91412   ACTAGACGGCAGAAA             CTAGCC GGCAGA GACTAG              CCGCGTCGGGAATAA  55 80
NtRootA1_35020 NONE
        ispH 3860596 .. 3860645 - -30.1  -4.19746   TGCAGCCTAAAAGAA CAGGCCCGCTGTGGCAGCTTCCC AAAA AGGTGGCTGCCACAGCGGGCCTG GTGAATACGTCCAGG 100 51
        ychF 3857910 .. 3857940 -  -2.3  -2.81642   AGACCATCGATTAGA       TCCGCGCCAGTAG TCGAC CTGCGCGCGCGGT       CGTCGCATCCCTCTC  39 232
NtRootA1_34980 3855716 .. 3855728 -  -9.1   -3.0894   GAAGCATGGACCGAA                GCCTC GTT GAGGC                CGGACGGGAATCTCG  60 339
NtRootA1_34960 3852682 .. 3852702 -  -7.6  -3.28447   CGAGCGATCACAATA           TGCATGCGC CGTG GCGCA-GCA            ACCTTTACAGAAACG  59 141
NtRootA1_34950 3851869 .. 3851891 -    -4   -3.1352   TTCCAAGCGAAGAGA           CCTACTCCAG CGG CTGGATCCGG           GGGTTGGCCCACGGC  45 4
NtRootA1_34940 NONE
NtRootA1_34930 3848912 .. 3848942 - -17.7  -5.28176   TTTAGGCACAAAAAA       GGGCCTCGGTTCA TACTC TGAACCGAGACCC       TTTACAACATCGCTG 100 150
NtRootA1_34920 3846907 .. 3846938 - -18.7  -3.45366   TGCCGAAGCAAGCAA      TTGGGGGCCCGGC ACCATG GCCGGGCCCCCAT       GCCTCACGGCAAGTT 100 54
NtRootA1_34910 NONE
NtRootA1_34900 3844953 .. 3844966 -  -2.3  -3.06492   TCATCGATTCTAATA               TTGGC AGAA GCCAT                GGTCGCCTCCTTAGC  41 36
NtRootA1_34890 3843170 .. 3843201 - -24.6  -3.09492   GCTTTAACGGCAAGA      GCCGGTGGTTCCCA CATC TGGGAACCACCGGC       TCTTGCTGTTGTCTC 100 81
NtRootA1_34870 NONE
NtRootA1_34860 3839265 .. 3839285 -  -8.9  -3.01791   ATTGCCGGGGTAATA            CGGCCGGCA GCA TGCCGGACA            TTCAACTTCTGAGCC  59 352
NtRootA1_34840 NONE
NtRootA1_34830 3837647 .. 3837694 - -18.5  -2.85361   TCAGTTAAAAAGCTA CCGCCAGTAACCCTCCGGAAC TAATCC GTTCCGTCCGGTTACTGGCGG AATGACGCGACTTGT 100 60
        gltA 3836145 .. 3836195 - -35.7  -3.08464   TTATTACGGACTGAA CCGACGACGGCGGCCGCCCACCTC GCGC GAGGTGGGCGGCCGCCGTCGT-GA TTGACGCTGTTGCCG 100 43
NtRootA1_34800 NONE
NtRootA1_34790 3833566 .. 3833576 -  -5.4  -2.70932   GCGCCGTCTGAATCA                 GTGA CCA TCAC                 CGTCTCGGCACCGAC  47 49
NtRootA1_34760 3830429 .. 3830468 - -28.1  -3.91897   TTCCTTAGTCATAAA  GAGAAGGTCCGCAGCCG TTCATT CGGCTGCGGACCTTCTC   TTTATGCGCTTTTAG 100 55
NtRootA1_34710 3826072 .. 3826093 -  -3.7  -3.86346   CCATCGTGCCAGAAA           CAGCCGCC TACTCCG GGC-GCTG           GTTTCCATTGGTCGT  57 11
NtRootA1_34700 3825611 .. 3825625 -  -2.8  -4.02075   CAAACACCAAGGAAA               CCTG CAGCCAC CAGG               GCCAATCTGCCATCC  58 119
NtRootA1_34690 3824421 .. 3824454 -  -2.9  -4.23213   CTGACACGGAACAAA     GACACTTCCCGACGG CGGA CAGTCGGGTTATGGC      GGATAGTCACCGCCT  60 19
NtRootA1_34680 3823995 .. 3824023 - -12.4  -4.86731   GCTGCTTAAACAAAA       GCAGGGCTCCGGC TCTC GCCGG-GCCCTGG        TCTTTTGAATCCAGC 100 53
NtRootA1_34660 NONE
NtRootA1_34650 NONE
NtRootA1_34640 3820705 .. 3820723 -  -3.1  -4.18018   CGGCGTCATCGAAAA             CATGTCC TTCCT GGAAATG             CCCGACGGCGGTCGC  61 324
NtRootA1_34600 3816915 .. 3816968 - -28.5  -3.90744   GCCCCGGGCAAACAA CAGCACAAAGGGAAGGCCACCGGAT GGAT ATCCAGTGGCCTTCCCTTTGTACTT CTTCTGAGGCTATTG 100 35
NtRootA1_34580 NONE
NtRootA1_34570 3813481 .. 3813503 -  -8.4  -2.79023   GAATCCTACGAAGTA           CCACTTCGAC AAC GCTGAAGTGG           ACCGTGAACCCTACA  54 374
NtRootA1_34530 3808720 .. 3808744 -  -3.3  -3.05596   GACGGCGGCAGCCAA          GGCGCTGCTGG GAG CCCTCGACGCC          GGCTAGACAGTCGGC  43 75
NtRootA1_34510 NONE
NtRootA1_34500 NONE
        thiG NONE
NtRootA1_34480 3805220 .. 3805257 - -28.7  -3.57144   CTGTTCAGTCTTAAA   TGGCTCTGGCCATCACC CGTG GGTGATGGCCAGAGCCA    TTTAACCTTTCTGTC 100 45
        moeZ NONE
NtRootA1_34430 3801313 .. 3801349 -  -4.9  -3.41913   CTGAGATGGAAAAAG    TCCGCGCCCGCCACGGT TGC ACCGCCGCTGCCGAAGA    GGTGGAGTTTGCGCT  53 275
        hemE NONE
NtRootA1_34400 3797414 .. 3797446 -  -8.5  -3.67976   GCCACTAAGTCGAAA      CGGATCACTTCTACA AGA CGTAGAAGTGACACA      AATCACGAAATTGAG  69 28
NtRootA1_34390 3796669 .. 3796687 -  -3.1  -3.32022   TGCTGGAGACACCAA            GGCCACTC ATGC GAG-GACC             TCTGCGATCTCGGCA  45 13
        hemH NONE
       hemC1 3794402 .. 3794457 -  -7.6  -2.62668   CAGGAGCGAAGCAAG TGGC-CGGGCACGGTCGGC-GCTCCTG GTAAT CAGGACCCGCCGACC-TGCCAAAGCCG ATGCTTGAGTCACAT  53 40
NtRootA1_34360 NONE
        hemB NONE
NtRootA1_34340 NONE
      hemL_2 3789908 .. 3789928 -  -3.2  -3.14132   TTTCCGCTTGAGCAA           CCAGG-CAC CATA GTGACCAGG            ATTCCGGCCGCCGCG  44 193
        yejJ 3788588 .. 3788635 - -12.7  -2.97735   CAGCCAAACAGCAGA CCCCGCCT-CCAGACCTTCGCC CTAGT GGTGAAAGTCAGGGATGCGGGG TTTCCTGCATTAAGC  74 94
NtRootA1_34260 NONE
NtRootA1_34250 NONE
NtRootA1_34240 3777578 .. 3777598 -  -9.7  -2.60392   CACCTGGCAAGGAAG            CAGCATCAG ACG CGGATGCTG            GAAGCGCGTCTGAGA  56 166
NtRootA1_34220 NONE
NtRootA1_34210 3773070 .. 3773083 -  -3.7  -3.29471   CGGTGAGCATAGGAA               CGTCC GGCT GGCCG                GCTGTTGGGCGCGGC  47 42
NtRootA1_34200 3772419 .. 3772446 - -11.3  -3.16683   ACCTGATCTCAGCAA        TGGTCGCCATG GATTTT CATGGCGGCCA         TTGTCGTCTCTAGCC  69 35
NtRootA1_34180 3769557 .. 3769600 -  -5.2  -2.87564   GGAGTCCGTCATATA TGCCACGAGTGGCGGTGGAGC TAA GTTCCACCGCCAGTC-TAGTT GTTGGTGCAGGTGGG  48 20
NtRootA1_34170 3766396 .. 3766433 - -23.5  -3.84451   TCCTCTAAATCGAAA   GGGCCGTTGCCCGCTCC AGGA GGAGAGGACAACGGCCC    TTCTAATCATGCGGC 100 60
NtRootA1_t00480 3766150 .. 3766179 - -17.3  -4.66537   CCGGGGAATACAAAA       GATCCGGACCAGT AAAT ACTGATCCGGATC        TTTTCTCCAGTTGCG 100 35
NtRootA1_t00470 3765856 .. 3765884 - -21.9  -4.99043   GCCGCACAAACAAAA        GGTCCGGATCAGT GAA ACTGATCCGGACC        TTTCTCCAGTTGCGG 100 34
NtRootA1_34160 3764897 .. 3764927 - -12.5   -4.3534   CCTGAACCATGAAAA       CTGGCCGGATCCC TCTTC GGGGTCCGGCCAT       TTCGTTCTCTGTGCA  93 50
NtRootA1_34130 3759825 .. 3759856 - -15.2  -2.73875   CCTGCGTCAACAGGA      GGACGGGTGACACCT GTG AGGTGGCACCCG-CC      GTCGTCCGCTTTGCC  83 65
NtRootA1_34120 NONE
NtRootA1_34110 NONE
NtRootA1_34100 NONE
NtRootA1_34090 NONE
NtRootA1_34080 3754654 .. 3754674 -  -2.3  -3.68836   ATGTCCAAAAGAAGA            CGGCCCAGG TTC CCGGCGGCG            GGACGGCTACAATTT  52 404
NtRootA1_34030 NONE
NtRootA1_34020 3749528 .. 3749545 -  -2.6  -3.60798   ATTTTTAGAAAGGAA             TGCGTC ATGGAA GCCGCA              ACCACCCACATGAGC  49 437
NtRootA1_34000 NONE
NtRootA1_33990 3747003 .. 3747022 -  -7.8  -3.31322   GCTAAGCCTGGACAA            CGGAGTCC TGGT GGATTCCG             CTCTTCGCAGCAGCG  58 493
        mnmA 3744918 .. 3744930 -  -4.8  -3.98913   GTGACAGCTAAAGAA                CTGC CCTCT GCAG                GGAACGTGCGGCGTC  62 5
NtRootA1_33960 3743090 .. 3743106 -  -7.9  -3.05596   GACGGCGGCACGCAA              GGCTGCC TGG GGCAGCT              AACCTTCCGTTGGCG  57 100
NtRootA1_33940 3740282 .. 3740312 - -21.2  -2.83403   TCGTGGTCAGCAAAG       GAGGCGGGACACCG GAT CAGTGTCCCGCCCC       TTTCCATCACATGGT 100 45
NtRootA1_33930 NONE
NtRootA1_33920 NONE
NtRootA1_33910 3736314 .. 3736342 - -18.9  -3.89614   AATGGAGACACTAAA        GGCCCGCTCCCCA GCG TGGGAAACGGGCC        TTCGGTGCATTATCC 100 100
NtRootA1_33890 NONE
NtRootA1_33880 3734010 .. 3734024 -  -3.5  -4.08216   GGATCGCTGGGAAAA               GAGGA TCTAG CCCTC               GCCAATCATCCCTGC  58 70
NtRootA1_33810 3726548 .. 3726566 -    -8   -3.1739   CAGAGGAAGCGAAGA             CCCGGCCG TAT CTGCCGGA             CACCGATCGAGACGA  59 271
NtRootA1_33800 NONE
        lpqB 3722897 .. 3722914 - -10.5  -2.72379   GCAAGTTGGCAATCA             GGCGCCC AAGC AGGCGCC              GGTCCTCTCCGCGTC  60 260
NtRootA1_33770 NONE
NtRootA1_33760 NONE
        secA 3717001 .. 3717024 - -12.4  -5.17353   AGATCTACGAAAAAA          GACCCCAGAC TTGT GTCCGGGGCC           TTCTCTCACAGGGTG 100 47
NtRootA1_33720 3714633 .. 3714664 -  -2.8  -3.03412   CAACTGCAGATAAAT      TCGCCGCAGGCC TACGCCCT GGTCCGCAGCGG       TGAGTTGAAAGCCAT  43 189
NtRootA1_33700 NONE
NtRootA1_33690 NONE
NtRootA1_33680 NONE
NtRootA1_33670 3705981 .. 3706030 - -33.9  -2.86747   TAGGCAGTACAAGCA CCAAACGCAGAAGGCCGCGGACC ACAT GGTCCGCGGCCTTCTGCGTTTAA GTCAGCTGCCCGTTA 100 64
NtRootA1_33650 3704536 .. 3704562 -    -5  -2.70932   CGGGGGCTGGAACTA         CCACGGGGGC TTTCTGG GCAACCGTGG         CCGACTCAGCCACTG  44 411
NtRootA1_33630 NONE
NtRootA1_33620 NONE
NtRootA1_33610 3697857 .. 3697883 - -15.9  -4.04579   TCCACAAACACCAAA         GGGAGGCTGGC ACATG GCCAACCTCCC         CCAAAGACGATGCTT 100 52
NtRootA1_33600 NONE
NtRootA1_33590 NONE
NtRootA1_33580 NONE
NtRootA1_33570 NONE
NtRootA1_33560 NONE
NtRootA1_33550 NONE
NtRootA1_33540 3689245 .. 3689279 - -26.6  -3.86252   CGGCAGGAAAGAGAA     GGGAAGGTCAGGACGC CAG GCGTCCTGACCCTCCC     TTTCTTGTTGCGGGA 100 46
NtRootA1_33510 NONE
NtRootA1_33500 3683893 .. 3683904 -  -5.8  -3.01712   TTTTTCCGCCCAACA                TGCC ACTC GGCA                 GCTATGAGGGTGGCT  49 246
NtRootA1_33470 3678067 .. 3678083 -  -2.2  -2.86539   TGCAACTGAGAAGGA             GGCC-CG CACT CGTGACC              TTTTCTATGCCCGCT  40 168
NtRootA1_33460 NONE
NtRootA1_33450 3675984 .. 3676002 -  -8.8  -2.68802   CACGAAATCGATAAC             CGCGGAAC CTC GTTCCCCG             CTATGAGGCGCGTCG  57 454
NtRootA1_33440 NONE
NtRootA1_33430 NONE
NtRootA1_33420 NONE
        prfB 3673286 .. 3673299 -  -3.7  -3.05844   TCGCTCAGTCCAACA               GCCGG AGCG CGGGC                TTTCGATGGGGGAAG  45 144
NtRootA1_33400 NONE
NtRootA1_33390 NONE
NtRootA1_33380 3670100 .. 3670113 -  -2.3  -2.66316   CGGGCCACTAGAGGA               GGGTC ATCG GATCC                ACTGCGGCGCCGTTC  38 4
        smpB 3669423 .. 3669460 -  -7.7  -3.72893   TATTCTGTTACCAAA   CCGGCAAGGCATTCATC AAGC GATAAAATCCCTACCGG    ACTATCCATCATAAC  66 103
NtRootA1_tm00010 3669008 .. 3669032 - -13.6  -5.65927   CAGGCAAAGAAAAAA          CCCCCGGATC ACTAG GATCCGAGGG          CTTTCCGGTGGAGAT 100 32
NtRootA1_33360 3667567 .. 3667579 -  -9.1  -2.61548   CTCCAGGACAATCCA                CCAGC CTG GCTGG                TCCAGTCACGTGCCA  56 292
NtRootA1_33340 3665841 .. 3665870 -  -8.5  -2.56596   TCGCGGACGAAGTTA       CAGCGGCACTTTG GGTC CAAAGCGCCGAAG        TCCACGAAGGCTGCG  53 104
NtRootA1_33260 NONE
NtRootA1_33250 3657251 .. 3657282 -   -26  -3.37017   AAGGCTTAACAGCAA      GGGCCCCGGAAACC ATTC GGTTTCCGGGGCCC       CTGGCGTTTGGGCGC 100 77
NtRootA1_33200 NONE
NtRootA1_33190 3647859 .. 3647873 -  -4.2  -3.55548   CAACAGGGCGGCAAA               GCCG GCAGAAG CGGC               CAATGACATGCGGGC  51 190
NtRootA1_33180 3646860 .. 3646908 - -12.3  -2.98823   TGCTGGTGAGAGACA GAGGGCCCCGCAGCCATCCTGAA TAT CTTAGGACGCCGACGGAGCCCCC ACCGCAATGGGATGT  71 49
NtRootA1_33170 NONE
NtRootA1_33160 3644663 .. 3644683 -  -6.7  -3.39895   CGCGTCACCAAGCAA            CGCCTGGCT GTC AGCGCGGCG            CTGGATGAATTGGAC  57 385
NtRootA1_33140 3643791 .. 3643806 -  -6.1  -3.74872   AGCGATTCCACGAAA              CCGGT GTGTGG ACCGG               TTAAACCTCTACTGA  61 26
NtRootA1_33120 NONE
NtRootA1_33110 3641520 .. 3641531 -  -2.2   -4.2558   GAGGTCGCACCAAAA                GC-CG CCG CGAGC                GTGGACCCTTCAGGA  62 35
NtRootA1_33090 NONE
NtRootA1_33080 3639682 .. 3639700 -    -3  -4.39287   TCAATGACATGAAAA             GTCAGCTG GAA CAGCTGGT             CTTTCCGGGCTTTGT  67 360
NtRootA1_33050 3634201 .. 3634239 - -23.8  -2.63631   TCAAGGTTTAGACCA   GCCGGCGGGACCGTCCGG CCC CCGGGCAGTCCCGCCGTC   GTTGGCTTGCCGCCA 100 366
        argS NONE
        lysA NONE
NtRootA1_32970 NONE
NtRootA1_32960 NONE
        thrB 3623152 .. 3623188 -  -4.4  -3.13737   CAAGATCCAAAATCA   GGGAACTGC-CC-GCGGC TTT ACCGCCGGTGCACTTCCA   CTCTAGCACCTTCAA  47 6
NtRootA1_32940 3620608 .. 3620620 -  -3.3  -2.92667   TCAAGTCCGAAAGGA                CTTGG CCG CCACG                CGTAGGGGCGGGGGC  42 68
        prfA 3619330 .. 3619343 -  -2.3  -2.75343   CCGATAGCTGGAAAT               CGGCA GGCT TCCCG                GGCCTTGCTATTCGC  39 33
        prmC NONE
NtRootA1_32910 NONE
        hfsJ NONE
NtRootA1_32890 3615594 .. 3615614 -  -5.4   -3.2056   AGCTACACGGACCAA            GGGATGCA GCCGG TGCATCGC            TGAAAAGCCGTGTAG  51 237
NtRootA1_32880 3614324 .. 3614337 -  -3.1  -2.55668   CATGGGGATACCAAT               CCTCGT GGC ACG-GG               TGCCATATTCTCAAA  40 113
NtRootA1_32870 NONE
NtRootA1_32860 NONE
        atpB 3612555 .. 3612570 -    -9  -3.01712   TTTTTCCTTTCAAGA              TGCCAC CCAT GTGGCA               GGTTGTTTGGTTTAC  59 71
NtRootA1_32840 NONE
        atpF NONE
        atpH NONE
        atpA NONE
        atpG NONE
        atpD NONE
NtRootA1_32780 NONE
NtRootA1_32770 NONE
NtRootA1_32760 NONE
NtRootA1_32750 3602004 .. 3602039 - -17.6  -4.16842   TGCAGTTTCAACAAA    CGCGTTGGTCCCGGCT TTCC AGTCGGGACCAACGTG     TTTAACAGTCAGAAT 100 128
NtRootA1_32710 3599086 .. 3599099 -  -3.8  -3.19246   CCAAGCCTAAGGGAA               CCAG CGGGAC CTGG                TCAGCGATACCTGTA  47 26
NtRootA1_32700 3597812 .. 3597830 -  -3.8  -2.52676   CACTTTCGGAAGCGA             TTACCGAC TCA GTAGGCAA             CTACGTGATCGGCCA  41 464
NtRootA1_32680 NONE
NtRootA1_32670 3593895 .. 3593911 -  -8.7  -3.54424   CTGCAGGGGCGTAAA              CAGTGCC GAG GGCACTA              GAACAGAACCCTCGC  66 23
        namA 3592815 .. 3592825 -  -2.4  -3.30243   AGGGACGTGCTAGAA                 GCCG TGG CGGG                 GTATGGCTCTCTGGT  44 9
NtRootA1_32650 NONE
NtRootA1_32640 3590250 .. 3590267 -  -2.7  -3.35679   TGGTGCCAGGGAGAA             TGACAAC TTCC ATCGTCA              CTGCCTTTCTTGTGT  46 106
        nagB NONE
NtRootA1_32620 3589088 .. 3589098 -  -8.2  -2.52896   GCACGCGGCAACGGA                 CCGC ATT GCGG                 TCACTACGGGAAGGG  53 63
NtRootA1_32610 3586852 .. 3586864 -  -5.5  -3.72576   CGGGCCCGGACCAAA                GGAGC TGA ACTCC                ACGAAGACCTGGACC  60 409
        clpS NONE
NtRootA1_32570 3584135 .. 3584145 -  -2.4  -2.80344   GGGCGAGGCAACAAC                 CGGG ACC CCTG                 CGGCGCTTGGTGATC  39 208
        murI NONE
NtRootA1_32550 3582286 .. 3582308 -  -3.3  -3.34043   GCGACGATGGGACAA           CGCCCGATG CCGTC CATTGGGTG           AGGCGTACATGCCAC  47 53
         rph 3581491 .. 3581524 -  -3.7  -2.50113   GAGCACCGGAGGAAC     CGTCGCCGCTCACGGA GCT TCCGCCAGCGTCT-CG     CGCTGGATGGCCGCA  41 1
NtRootA1_32530 3580742 .. 3580795 - -32.7  -3.65902   CTCACCGCACTCAAA TGCCATACAGGAGAAGGCACCCCGC AAAG GCGGGGTGCCTTCTCCTGTATGTCT CAAGCCGGGCTTCCA 100 71
        dnaQ 3578672 .. 3578686 -  -3.5  -3.58343   CCTACTATGGCGAAA               CAGCA CTTCC TGCCG               AGTGGCTCGGGGCAC  51 127
NtRootA1_32490 NONE
NtRootA1_32480 NONE
NtRootA1_32470 3575776 .. 3575811 -  -4.7  -5.28176   GGCACCGACAAAAAA   GCGCAGACAGG-CCGTC CGGC GTCGATCCTGTCCG-GC    TGCTAGCCCTTCTTT  86 28
        sbcD NONE
        sbcC 3571340 .. 3571363 -  -8.8  -3.02144   GGAGTCTTGCGAAGA          GGCCGAGG GGCAGGAA CCCCGGCC           CGGCGAGCTCAGGCA  60 224
NtRootA1_32440 3569677 .. 3569687 -  -3.2  -3.68619   GCGAAGGCATTGAAA                 CCAG TCG CTGA                 TCCCGGATTGGGCCT  54 401
NtRootA1_32420 NONE
NtRootA1_32410 NONE
NtRootA1_32400 NONE
NtRootA1_32390 NONE
      ssuC_1 NONE
      ssuB_1 NONE
NtRootA1_32360 3562141 .. 3562155 -  -5.6  -3.20164   CTACATCGAAGCCAA               TCTGGG CGA CCCCGA               ACTTTCCCCGGGAAC  51 316
NtRootA1_32340 3559683 .. 3559722 - -33.8  -3.60296   CAGCCGCAGCGGAAA  GGAGAGGAAGCCCCCGGC AGTT GCCGGGGGCTTCCTCTCC   TTTCCTGCGGTTTCG 100 56
NtRootA1_32310 3555960 .. 3555981 - -15.9  -3.28912   GTAGAGGCACATGAA           CGCGCCGAA CTAC TTCGGCGCG            CCAGGCAATACCCAG  84 431
NtRootA1_32290 3554964 .. 3554993 -  -4.3  -3.04398   GTTGCCGGCGAAAAG       GACGATCGGGCA GCCACCA TGCCCGAAC-TC       GCGCACCTCGCCGGC  45 167
NtRootA1_32230 3549600 .. 3549610 -  -5.4  -3.66874   GGAATCTTAGTTAAA                 GTCA TCT TGAC                 TAGAACTAATGGTAC  58 73
NtRootA1_32220 NONE
        nadA 3547393 .. 3547408 -  -6.1  -2.70932   CTTCGGCGGCAAGCA              GGGCT GAGTAG AGCCC               CGCAATGCCGCTTCC  49 140
NtRootA1_32190 NONE
NtRootA1_32180 NONE
NtRootA1_32170 3543143 .. 3543167 -  -7.8   -2.9176   AACCTCATGGAGACA         GCCGCAG-ACG CCGC CGAACTGCGGC          CGCCTCCCTTACAGA  53 478
NtRootA1_32110 NONE
NtRootA1_32100 3538747 .. 3538775 -  -7.3  -3.41878   TGGTGGAACGGACAA        CAGCGCCCGACGA CGG CCGTGGAGTGCTG        CTGTCCCTGACCGAA  60 220
NtRootA1_32040 3529083 .. 3529116 -  -8.7  -3.62597   TGGAGGCCGGAAGAA     GGCTAC-GGTCAGCCC ATT GGGCAGTCCAGTGGCC     GGCCAGCGCGAGTGG  66 226
NtRootA1_32020 3527895 .. 3527938 - -21.2  -3.48276   GGGGGGTGCACAGAA TAGTAAAGGCTCCGGATCGT TGCT ACGCTCCGGAGCCTTTACTG CTTCCTGTGGACTTT 100 128
      ilvD_3 3522982 .. 3522992 -  -4.6  -2.70932   CGCGCTTGGTAAGTA                 CGAC GAC GCCG                 ACGGTAACGAATGAG  44 170
NtRootA1_31980 NONE
        ilvH NONE
        ilvC 3519301 .. 3519318 -  -6.9  -2.84801   CACTGGGAAAGATCA             GCGGGCT GCCG AGCCCTC              GACGTAGTCCTCGTC  51 5
NtRootA1_31950 3517369 .. 3517400 -  -2.2   -2.7386   AAGCCATTGTAAGCA      GACCGACCACCG TTGCGTGT CAGTGGTGTGTC       CCCGGCACGCGAACT  39 61
NtRootA1_31940 NONE
NtRootA1_31930 3513590 .. 3513626 - -15.8  -3.17075   TTTTTTCGAATGGAA    TGACTGGACCGGCCGC AAATG ACGGCCGGTCCGGTCT    GTGCCGGACATCCCG  88 62
        metG 3511914 .. 3511966 - -23.7  -2.62933   CAACGGGCCATATGA GAAATGCTCTCTCACTTCCTTCCCT TGA ACGGGAGGATGTGAGAGAGCATTTC AGCTTTGGGGCCGTT 100 59
        leuB 3505409 .. 3505422 -  -4.5  -3.22938   GTAAATAATTCAAGA               CAAGC TTAC GCCTG                AGAAATGAGCCTAAA  49 36
      ilvE_2 3504195 .. 3504213 -  -4.5  -3.72695   AGTTGTGTCAGGAAA             CCCTGGT ACTAG ACCAGGC             GTGTCAGCCAGCCGT  56 15
NtRootA1_31850 3502983 .. 3502999 -  -3.5  -4.10934   AGAATCAACTACAAA              CCGGGCG ATA CGCATGG              GCTCAAGCCTACCTT  60 63
NtRootA1_31840 3502147 .. 3502202 - -21.8  -3.14132   GGTTCCCCGCAGGAA TGGCCCGACGACGGCCCGCGCCTTTC GTAC GAAAGTCTCGTGCCGTCGTCGGGCGC TAAGGTCTGGTCCGG 100 44
        gltX NONE
NtRootA1_31820 3499696 .. 3499714 -    -6  -2.89267   GCCAATTACACCATA             TCCCAAAG TGA CTTTTGGA             CCGGAGTTCTTCGCC  51 149
NtRootA1_t00420 3499535 .. 3499561 -  -5.8  -3.61398   GTTTCCGGCGAACAA         GCTGAATGAGTA TTT CACACTTTCAGC         TCTCTTCCAAATCGG  55 90
NtRootA1_t00410 3499394 .. 3499421 -   -20  -3.89354   CGCTTAAACCAAGAA        TTCCCCCGGAAC CAAA GTTCCGGGGGAA         TTGTTTGTGACCCCA 100 31
NtRootA1_31810 NONE
NtRootA1_31800 3495829 .. 3495841 -  -4.7  -3.30701   CCTGATCAAAGTCAA                GGACG CTG CGGCC                GATCTATAGACGTCC  49 41
        leuC NONE
        leuD 3492286 .. 3492321 - -17.6  -5.01732   AATCCTCCGAAAAAA    GGACCGGCGAGCCCACC CTA AG-GGGCCCACCGGTCC    TGGTTCCGCAGCATT 100 59
        murA NONE
NtRootA1_31740 NONE
        gpsA NONE
         ddl 3487740 .. 3487776 - -25.3  -3.00994   TCAACCGCATACACA    GCAGCTGGTGCCGGTCG TTC CAACCGACACCAGCTGC    TATTTGCCAGGGTTC 100 39
        thiL NONE
NtRootA1_31690 NONE
        recG 3482577 .. 3482619 -  -4.6  -3.21416   GATTGCCACCAGCAA CTCCGGCAATAATCCGGCTC ACA GCGCCTCTCCATTGCCGGTG CCCGACCCTTTACCG  49 62
NtRootA1_31670 3481591 .. 3481619 -  -5.2  -4.07568   CTTTGTCCTGCAAAA       GCTACC-CATGCC CGAG GGCACGCGGCTGC        ATACGCACATAGGCG  63 438
        coaD 3479381 .. 3479391 -  -2.4  -3.68351   GCCTGAGGACTCAAA                 CCGG TGC CGGG                 CGCGCGAAGAGCGTC  51 110
NtRootA1_31630 NONE
NtRootA1_31620 NONE
         rnc NONE
        mutM NONE
NtRootA1_31590 NONE
NtRootA1_31580 NONE
NtRootA1_31570 NONE
NtRootA1_31560 3472765 .. 3472785 - -10.4  -3.85817   ATTCGTTTCTATAAA            GGCACCGG GAACA CCGGTACC            CATGTTGGGTCGCTG  76 502
         smc NONE
        ftsY 3463124 .. 3463181 - -15.2  -4.67038   CGCTTAAAAGCAAAA GTGACTGGCAATAGTGGTTG-GTTAGA GCGCT TCGAAAACAACCACTATTGCCAGTCAG TTGGGCGATTGCGCT 100 39
       amt_1 NONE
        glnB 3459966 .. 3459998 - -27.9  -3.32022   CCGTCCAGACATGAA      GCGGGCCGGATACCT GAG AGGTATCCGGCCCGC      TTTATTTATTAGGAC 100 41
         ffh 3456702 .. 3456743 - -19.6  -4.57073   CATCCCCGCCAAAAA GCAGTTGGCGCCGTTATG GGAATT CACAACGGCGCCAACTGT  CACAGTGAGTCGGAG 100 49
NtRootA1_31470 3455556 .. 3455571 -    -6  -2.55216   GATCACGTACAAGAT              CGCAGC GCAC GCAGCG               GACCTCGCCAAGGGA  46 392
NtRootA1_31450 NONE
NtRootA1_31440 3451876 .. 3451894 -  -4.4  -2.52464   TGCTCGCGGAAGCCA             GCGCGAGG ATG CTTAGCGC             ACTGCCACGCGCAGC  43 19
NtRootA1_31430 3451167 .. 3451180 -  -5.2  -3.53012   CTCCTGTTTCTGAAA               CGGG GTTGAA CCCG                ACGTTCTGCACCCGT  55 174
NtRootA1_31420 NONE
NtRootA1_31410 3450412 .. 3450455 -   -16  -3.96224   GAAATGATCGATAAA GCAATCCGGCCCCTCCACCA TATT CGGTGAAGGGGCCGGATCTA AGACAAGTATTGCTG 100 47
        rimM NONE
        trmD 3448800 .. 3448813 -  -2.3  -3.32997   GCGGCACAAAGCCAA               CCGGA AATC TCCGC                CGAAGTTTCTTGGTG  46 193
        rplS NONE
NtRootA1_31370 NONE
NtRootA1_31360 NONE
NtRootA1_31350 3446050 .. 3446063 -  -3.1  -2.96692   CATCAGCAGGACACA               CGCTGC AGA GCAG-G               CTGTCAGACAACGTC  42 29
NtRootA1_31340 3445634 .. 3445654 -  -4.6  -3.13403   TCTTGTGGAGGAAGA            GTACCCGC GGGCT GCAGGTGC            TAGTTGCCGAGGTCT  47 25
NtRootA1_31330 3445180 .. 3445192 -  -5.5  -3.09635   ACCCCCATCAGCCAA                CACCC CTC AGGTG                TTCCAGTTGGGGATC  49 5
NtRootA1_31320 3444050 .. 3444077 -  -5.5  -3.16564   CTGGCACCGCAGCAA        GGCTGCCG-GCC GACCT GCCACGGCAACC        CGCTGCACCAGATCA  49 425
NtRootA1_31250 NONE
NtRootA1_31240 3437876 .. 3437889 -  -5.2  -3.63991   GACCAGGCCGAACAA               CCGG GCTGTA CCGG                CGGCGGGGCCGATGA  55 238
NtRootA1_31210 3436497 .. 3436520 -  -3.8   -3.9712   GGATTCCATCAGAAA          GCGCCCAA AACACCGA TCGAGCGC           ACGCTGTCATCACGG  61 446
NtRootA1_31190 3434534 .. 3434550 -  -3.6  -3.54424   GCCCATCTGGTCAAA              CGTCGG TAGAC CCGATG              GCGAAGGAGGCAACC  51 4
NtRootA1_31180 3434019 .. 3434037 -  -5.8  -2.62184   TGGCCCCGGAGATGA             CGCCGAGC ATC GCGCTGCG             GTCAACGCCAACCGA  46 27
NtRootA1_31170 3433418 .. 3433456 - -30.6  -3.29144   CCACCTCCTCCACAA   TGAACAAGACCCCCGACG CTG CGTCGGGGGTCTTGTTCA   TTGTGGAGTCCTGCG 100 106
NtRootA1_31140 NONE
NtRootA1_31130 3427522 .. 3427568 - -20.2  -3.15663   AGGCACTGTTATGAA GAATGTCGGCCGGGTGCCCGC ATTTCG GCGGGCACCCGGCCC-CGTTC GGCGGTGTCAGGCAG 100 33
        ssdA NONE
NtRootA1_31110 3424884 .. 3424896 -  -3.3  -3.80625   GCCCTACAACGGAAA                TTCGG CTG CCGAG                TTGGTGCGCCTGGTG  54 467
NtRootA1_31030 NONE
NtRootA1_31020 3417494 .. 3417504 -  -3.2  -3.97308   TCCAAACAGATGAAA                 GAAC CAC GTCC                 GACGCACCATCGGCA  58 73
NtRootA1_31000 3416314 .. 3416345 - -18.8  -4.27443   GCATGACGAAAAGAA      TGAACCCCGACAGC CTGA GCTGTCGGGGTTCC       GTTGAGGCCTGTCAG 100 37
NtRootA1_30990 NONE
NtRootA1_30980 3414650 .. 3414666 -  -2.9  -3.49475   CGTATCCGGAGACAA              CAGCACT GGA AGAACTG              TGCCTGGCTAACCGT  49 96
NtRootA1_30970 3413425 .. 3413437 -  -5.5  -2.78679   GCTTGTGATCTAAAT                GGACA CCG TGCCC                TGCTCGTACCATGGG  47 57
NtRootA1_30950 3410749 .. 3410768 - -10.6  -4.03234   CCTTTCGGACAGAAA            GAGCGCGG AAAG CCGCGCAC             GCGTCAGCGCGCCGA  80 507
      rpoE_2 NONE
NtRootA1_30920 3407640 .. 3407677 -   -17  -2.81966   CTAAATGTTACGAGA   CGTCCGCCTCCGCCCC TTGTGC GTGACGGAGGCGGACA    TCTGCAGTGCAACTA  87 38
NtRootA1_30900 3405818 .. 3405838 -  -2.4  -3.12446   GACAAATCGAGGGAA            CGCGCCGG GGACA CCAACGGG            AAGAGCGCGGGCTTG  41 128
NtRootA1_30890 3404725 .. 3404735 -  -5.4   -3.5518   CGAATACTCATAGAA                 CATC CCT GATG                 TGAACGCGATGAACT  55 153
NtRootA1_30880 3404091 .. 3404103 -  -6.3  -3.93819   AGGAAACGAGAAGAA                CAACA ACT TGTTG                CTCCTTCGTTTGACC  64 212
NtRootA1_30870 3402360 .. 3402375 -  -2.5  -3.89881   AGCAATTGCTATAAA              GGTAC TGTCCG GCACC               GACACAGCGTTTGAA  53 247
NtRootA1_30860 NONE
NtRootA1_30850 NONE
NtRootA1_30840 3397619 .. 3397642 -  -9.6  -2.89564   CGGCCAGTGGACATA          CTGG-GCAGCA TGA CGCTGCTCCAG          AGCTCCTTGGTCGCC  62 155
NtRootA1_30760 NONE
NtRootA1_30750 3389088 .. 3389098 -  -3.2  -3.53563   ACACGCGGCCCTAAA                 GGAC TTC ATCC                 TCGACTCCACACAGG  49 331
NtRootA1_30730 3384945 .. 3384972 -  -2.7   -5.0133   CAGCCGGCCAAAAAA        TCGCGAAGCGTA GAACG TGCGCCTCG-GA        ACATGGAAGGCATCC  74 47
NtRootA1_30720 3382931 .. 3382969 -  -7.3  -3.16564   GGTGGAGGCCATCAA  GGCCGGA--GCCGCCGTGG CGG CCTCGGTGGCCATCCGGCG  GGCGGAGGCAGCTGA  56 94
NtRootA1_30680 3380766 .. 3380802 -   -18  -4.96848   CCTGGGAGAGAAAAA    GCAGAGCCCCGCGGAC GCGTG GTCCACGGGGCTCCGG    TACTGCAGGTCGATC 100 65
NtRootA1_30670 3380175 .. 3380209 - -18.7  -3.60525   GCCAGTCAGACACAA     GAAGACCCCGTGGAC GTGAT GTCCATGGGGTCTTC     CTTTCCCGTCGGGCG 100 64
NtRootA1_30610 3369213 .. 3369242 - -17.9  -2.53876   CTGTAGTCGAACCCA       TCAGCCCGGTGCC ATCA GGCAACGGGCTGA        TTTCATTCTAGAGGC  87 66
NtRootA1_30570 3365655 .. 3365686 -   -26  -3.12351   CTGCCTGACAGCGAA      GAACCCCACCCGGC TACA GCCGGGTGGGGTTC       TTTTTTGTTTTGATG 100 44
NtRootA1_30540 NONE
NtRootA1_30530 3362090 .. 3362112 -  -6.8  -2.70932   CGTGCCGCCGAAGCA           GGGACAGGAG CTC CCCCAGGCCC           GGCAGCCGGATCTCA  49 435
NtRootA1_30510 NONE
NtRootA1_30500 NONE
NtRootA1_30490 NONE
NtRootA1_30480 NONE
NtRootA1_30470 NONE
NtRootA1_30460 3358631 .. 3358658 - -14.9  -3.72576   TCGTTGTGCACGAAA        CGCGCGG-GCAG TGTCC CTGCTCCGCGCG        CGATGGTGAGTTGAA  95 203
NtRootA1_30450 3357998 .. 3358043 - -18.4  -4.25104   CGGCGGCCAGCAAAA GCAGATCCCCGTCCGAGCAGC GCGAG GCTCCTCGGACGGGGA-CTGT CGGCGTGTGCGACCC 100 94
NtRootA1_30440 NONE
NtRootA1_30430 3357342 .. 3357398 - -20.9  -3.81651   ACCTGAACGAAAAGA CAGCGCCCCGC-CACGCCGCTGCTGCC GGGAG GGCAGG-GCAGGGCGCGCGGGGCGCTG GTGGGGCCGGAGCCA 100 73
NtRootA1_30420 NONE
NtRootA1_30400 NONE
NtRootA1_30390 3355697 .. 3355745 - -16.6  -4.32857   TTCCGGAAAGAGAAA GACAGGACCCCCGGCCCTGAGC GATGG GCTCGGTGCCAGGGGTCCAGTG AGAGAGATCAGTTGC 100 33
NtRootA1_30380 NONE
NtRootA1_30370 3354513 .. 3354559 - -19.5  -3.73224   CGAGCCGCCAGGAAA GAGACGAGCCCGGCACCAGGGG CTCT CCCCC-GTGCCGGGCTCTTTTC AGGCTCAGTGCATGC 100 30
NtRootA1_30360 3353785 .. 3353826 - -20.9  -5.72616   ACGGACACAAAAAAA GAGACCCCACCGCCGGAGC ACGC GCTCTGACGGTGGGGTCTT  CTTCAGGCGAACGTC 100 28
NtRootA1_30340 NONE
NtRootA1_30330 NONE
NtRootA1_30320 NONE
NtRootA1_30310 3351903 .. 3351949 - -22.3  -3.05022   CGCCTCAGAGACAGA GCGAGAGCCCCGGC-CCCGCGC CGGA GCGCAGGAGCCGGGGCTCTGGT GGGATCAGGCAGGGC 100 47
NtRootA1_30300 NONE
NtRootA1_30290 3350745 .. 3350787 - -18.5  -5.39721   TGACCAGAGAAAAAA GAGACCCCGCCGCC-GGAGC TGAT GCTCCTGACAGTGGGGTCTC TGCTGTAGTGCTGGT 100 49
NtRootA1_30220 3344047 .. 3344065 - -10.2  -3.85698   TCCTCCTCGGACAAA             CCTGGTGC GCA GCGCCAGG             TGATCCACCGCCTGG  77 410
NtRootA1_30210 NONE
NtRootA1_30200 3342797 .. 3342837 - -19.2  -3.35992   ACCTATTCGAATCAA GGATCAACAGCCCTGCAGC ACCA GCTGCAGGGCTGTTG-TCA  TGTCCGGGGTGTGCA 100 45
NtRootA1_30180 NONE
NtRootA1_30170 3339339 .. 3339389 - -24.1  -2.63596   GGTCACCCGAGAGCA GGCCCTCCGGAGCGACCGT-CGGCC CAC GGCCGAAAGGTCGC-CCGGAGGGCA CCAGCGTCAGTCCTG 100 58
NtRootA1_30160 3338749 .. 3338800 - -21.2  -4.21098   ACAGGAACGTGAAAA CAGAAAGGCCGGAGAAGCATCCCC GTGGGA AGGGA-GCT-CTCCGGCCTTTCTG CGCGTTCACGCTGGT 100 66
NtRootA1_30150 NONE
NtRootA1_30140 NONE
NtRootA1_30130 3331977 .. 3332001 -   -20  -3.67558   CACAGAGTTGAACAA          GGGGGCCGCG GCGTG CGCGGCCCCC          TTGTGCGGGCTGTGG 100 50
NtRootA1_30120 NONE
NtRootA1_30110 NONE
NtRootA1_30100 NONE
NtRootA1_30090 NONE
NtRootA1_30080 NONE
NtRootA1_30070 NONE
NtRootA1_30060 3326101 .. 3326129 -  -6.6  -2.70932   GTGTCGTGGCAATTA       GGGGGGACCGGGC TGAG ACCCGA-CCCCCG        GCATCACTGCCCCGG  49 118
NtRootA1_30050 NONE
NtRootA1_30040 NONE
NtRootA1_30030 NONE
NtRootA1_30020 NONE
NtRootA1_30010 NONE
NtRootA1_30000 NONE
NtRootA1_29990 NONE
NtRootA1_29980 NONE
NtRootA1_29970 3322105 .. 3322132 - -18.5  -2.87132   GTGTGCGGGCACAGA        GCCCCGGAGGA TCCCAT TCCTCCGGGGC         TCTGTGCGCGAGGCT 100 93
NtRootA1_29960 NONE
NtRootA1_29950 NONE
NtRootA1_29940 NONE
        ycaJ NONE
NtRootA1_29920 NONE
NtRootA1_29910 3318519 .. 3318529 -  -2.4  -2.82082   ACGAAGGAGCAAGGA                 CGGC TGT GCTG                 GGGTCCGTGTCCACT  39 105
NtRootA1_29900 3317420 .. 3317434 -  -4.2  -3.13403   GGCCTTCGAGCAAGA               CGCC AATGCGG GGCG               GGTGGACGACGTGCT  47 350
NtRootA1_29870 3315287 .. 3315304 -  -4.2  -3.39327   TGGTGATACCGACAA             TGATGA TCTCAG TCATCA              GATCTCACCGTCCTC  49 23
NtRootA1_29860 NONE
NtRootA1_29850 3313440 .. 3313469 -  -2.1  -3.32498   GATTTCAGACATGAA       GTCATCGAG-GC GAACGGT GCACGCGACGAC       ACCTTCATACTAGTG  44 102
NtRootA1_29840 3312966 .. 3312994 - -10.3  -3.17051   CCGGCACGAGGAAGA       CGTCCGCAGGGT GGTGGG ACCCCGCGG-CG        GGATCAGTCTTGAGC  66 29
NtRootA1_29830 3312238 .. 3312268 - -20.5  -4.18018   CCCCGGGACGCAAAA      GACCCCGCCTCGGC CGAA GCCG-GGCGGGGTC       GAACGAACGCCAGAA 100 58
NtRootA1_29820 NONE
NtRootA1_29810 3311389 .. 3311439 -   -16  -2.62396   CACGGCGTGAGAGCA GGCCTGGGGCCCGGACAACGCTGA CCT TCAGCGCTGTTCGGGCCTCTTGCT GTGTCCGGAAACGGT  84 40
NtRootA1_29790 3309641 .. 3309685 - -24.5  -3.53091   ACCGCGGCTCTGAAA GACGAGACCCCCGTAC-GGC GTGGAT GCCTGCACGGGGGTCTCGTC TGGGGTTCGGTCGGT 100 56
NtRootA1_29780 3308427 .. 3308440 -  -9.5  -2.72049   GACATGTCGGAAGCA               GGGCC ACAA GGCCC                GGTGACGGGGCGGTC  61 133
NtRootA1_29770 3307095 .. 3307109 -    -7  -2.55351   TCGGCTCAGAGGAAG               GCCGAC AGG GACGGC               TTGACCGCGGCCACG  50 1
NtRootA1_29760 3305240 .. 3305264 - -14.2  -2.83164   TGAGGGAGGAGGAGA          CGCCGGCCGG TTCGG CCGGTCGGCG          TCTCCTCCATGGCTG  80 51
NtRootA1_29750 NONE
NtRootA1_29740 3302711 .. 3302746 - -24.1  -2.78384   GGCGCGGGCATGAGA    GCGGGAGGGCTCGCC TCTGGC GACGAGCCCTCCCGC     ACTCCTCTCAACCCA 100 176
NtRootA1_29730 3299721 .. 3299770 -   -20  -2.73483   ATGGGATGGGAAGCA GGAGGCGCGGGCGCTCCGACCTC TCGTG GAGGT-GGAGCGCCCGCGCCGGT GCCGTCGGTCAGACG 100 34
NtRootA1_29720 3299059 .. 3299072 -  -3.7  -2.62184   GCGGTGCTCAGAGGA               TCGGC AGTG GCCGG                CCGGAGGGCTTGTAG  42 4
NtRootA1_29710 NONE
NtRootA1_29700 NONE
NtRootA1_29690 NONE
NtRootA1_29680 NONE
NtRootA1_29670 3296189 .. 3296237 - -25.4  -3.67611   GGCAGTTGAAGAGAA GCA-GGCCCGCGCCCTGCGGCCCA CTG CGGGTCG-AGGGCGCGGGCCATGC ATCAGAACTCGCCCG 100 27
NtRootA1_29660 NONE
NtRootA1_29650 3295199 .. 3295218 -  -2.8  -4.25347   AATGACGAACAGAAA            CGA-TGCCC AAT GGTCAGTCG            AACTCGACGTCTGCA  64 339
NtRootA1_29630 NONE
NtRootA1_29620 3294522 .. 3294532 -  -2.4  -3.81146   CCGCTGAAGCAAGAA                 TCGG CGG CCGG                 AGCGGGTTCTGCAAA  53 55
NtRootA1_29590 3291795 .. 3291828 -  -9.5  -2.87051   CCGGGATGAGGAAAT     CCGC-GCTGAGGCCGA TCT TCGGACGCAACTGCGG     GCTGCTGTTGCCGAG  62 333
NtRootA1_29570 3290960 .. 3290987 - -19.2  -5.89659   AGAAAAAAATAAAAA        CCCCGGCGATGC GGAA GCATCACCGGGG         TTCTTCTGTCAGTAA 100 159
NtRootA1_29360 3259558 .. 3259579 -  -5.8  -2.84723   CCGCAACAGGAAGGA           CGCCCG GATCCATGCA CGGGCG            GTGAGCGGCGACGCG  48 246
NtRootA1_29340 3257426 .. 3257437 -  -7.2  -3.80733   GTCAGCGCATAAGAA                GGCC CCTC GGCC                 GGCACGGGGCAAATC  66 137
NtRootA1_29330 3256145 .. 3256161 - -10.1  -2.78816   GCACCTGGGACGATA              TGCCGCG ATT CGCAGCA              GCGTTAGCCTAGCCA  63 34
NtRootA1_29300 NONE
NtRootA1_29290 NONE
NtRootA1_29280 NONE
NtRootA1_29270 NONE
NtRootA1_29260 NONE
NtRootA1_29250 3242809 .. 3242819 -  -3.2  -2.57344   CACTCTCCTTAGAAG                 TCGA AGT CCGA                 GGCGAACGATCGCTT  40 8
NtRootA1_29240 3240247 .. 3240269 -  -7.6  -3.71794   ATCGAATTACTCAAA           TCCGAAGCGG ATC CCGGATCGGA           CAGCGTCTCCTTTAA  65 400
NtRootA1_29220 NONE
NtRootA1_29210 3238244 .. 3238301 -  -7.7  -2.64616   CTCTTACGGAGAGGA CCGCCGGAGGCCTGACTCAGTCGTATCC GCT AAATATG-CAAAGTCAGGCCTGCAGGGG TTCGTCGCAGGCTTT  53 11
NtRootA1_29200 3237737 .. 3237767 -  -2.7  -4.67607   TGCTCAACAAAGAAA      TCA-TCCAGAG-CCA CAT CGATCTCTGGACTGA      AGCCGACATTAAGGA  72 131
NtRootA1_29170 3235606 .. 3235616 -  -4.6  -4.10161   GATTATGTCCGAAAA                 CGGA CAT CCCG                 GCGTGGGAGTTTTGG  64 45
NtRootA1_29150 NONE
NtRootA1_29140 3232927 .. 3232950 -  -3.1  -3.78934   GGTTGCGTACAACAA          CTCCACCAT TGCACG ATCGCGGAG           GGCCAGAGGACCTCC  54 520
NtRootA1_29120 3231652 .. 3231683 - -24.6  -3.52652   CCTAGGTAAGTAGAA      GAGAAGGGCCCACC AGCA GGTGGGCCCTTCTC       TGTTGCTATGGGAAT 100 64
NtRootA1_29050 NONE
NtRootA1_29040 NONE
        cobB 3221223 .. 3221233 -  -3.2  -2.64322   AGCTGAGCTAAAGAC                 CCAA AGT TCGG                 TTTCAGTGCCTTAGC  40 72
NtRootA1_t00400 3221105 .. 3221143 - -23.2  -4.67038   TCGGGAAAAGGAAAA   CCCCGCCATTCCGAACCG TTG CGGTCCAGGATGGCGGGG   TTTCTTGGTGGGTCC 100 31
NtRootA1_29020 3220658 .. 3220668 -  -5.4  -2.73124   CTTTACTTTCCAAAC                 CGAA AAG TTCG                 CTGTATATTCATTTT  47 108
NtRootA1_29010 3219559 .. 3219588 -  -3.4  -4.08945   AGCACTCCCTCAAAA       TCACCCCAGGCC CCCGTT GGCCCGACGAGA        TAGTGATGGCATCAC  58 144
NtRootA1_29000 3218129 .. 3218155 - -23.8  -4.18197   AGTCCTGATGCAAAA         GGCTCCGACCCC AAA GGGGTCGGAGCC         TTTTTTGTGCCAAAG 100 60
        garR NONE
NtRootA1_28970 NONE
NtRootA1_28960 3214131 .. 3214173 -  -9.2  -2.75066   AATAATGCGCCAAAC GATCGCGGAGCTGGCC-CCC AGCTG GAACGACCAGCCCCGCG-TC TTCGTACCCGTGGCG  61 46
NtRootA1_28940 3211750 .. 3211786 - -22.4  -3.63627   TTCCGACACGGCAAA    GGCCGGCTCCTCCCAG CGTAT CTGGGAAGAACCGGCC    TTGCTGAGGAACCTT 100 39
NtRootA1_28930 3210802 .. 3210819 -  -5.5  -3.52918   GAAGTCCGAAACCAA             GCCGG CGGTTGAC CCGGC              TGAGTACTACATCGA  55 59
NtRootA1_28890 NONE
NtRootA1_28880 3206634 .. 3206647 -  -2.3  -3.71527   TTTCAACGAGGCAAA               CGGCA AGCG CACCG                TGGTCAGCCACTTCG  52 209
NtRootA1_28860 3203826 .. 3203841 -    -4  -2.73243   ACTCAGCCGGGAAAC              CCGTGAA TAC TTC-CGG              CTTAGGCGTTCGCTG  43 27
NtRootA1_28850 3203489 .. 3203509 -  -8.9  -2.80113   TACGAGCGTAGGACA            CGGCACCGA CAG TCAGAGCCG            ATATTCACAGTGTGT  58 79
NtRootA1_28840 3202390 .. 3202400 -  -6.8  -2.59431   TTCCCGGACAAGCCA                 GCCA CTG TGGC                 CACGTGCGAGTCCTG  48 266
NtRootA1_28800 3198423 .. 3198439 -  -5.8  -3.40907   GTACAGCAAGACGAA              CCCCGA GTGGG TCAGGG              CATTCGCCGCAGAGA  55 164
NtRootA1_28780 3197970 .. 3197982 -  -6.9  -2.77522   AGAGGTGCGAAGAAT                CGCCA AGG CGGCG                GCCAGGCAGTTTCCC  51 47
NtRootA1_t00380 3196154 .. 3196190 - -15.9   -3.9693   CACGTAGTTAAAGAA    TCAATCCCCCGGAACCC TGC AGGTTCCGGGGGATTTC    CTGTGCCCCAGGAGG 100 27
NtRootA1_28730 3193289 .. 3193318 - -23.7  -3.15758   AGAATTCCCTAGCAA       TGAGGCCGGTCCC TGTT GGGACCGGCCTCA        TTTTGTGCCTGTGGC 100 47
NtRootA1_28710 3191393 .. 3191411 -  -3.1  -3.61517   ATGTTCCTGGAACAA             TATTGGG GTGGT CCCACTA             CTTACAGTGAGGAGC  51 259
NtRootA1_28680 3189164 .. 3189174 -  -4.6  -3.44051   CGGCTACGAGGACAA                 CGCC GAG GGCA                 TCATGAAGCTAAACC  53 236
NtRootA1_28650 NONE
NtRootA1_28640 NONE
NtRootA1_28630 3183654 .. 3183679 -  -7.6  -3.64915   TCTTACAAATGACAA         GCGCT-GCTAC AACTG GCAGCCAGCGC         ACCAATACAGTTTGC  66 6
NtRootA1_t00360 NONE
         tig 3180489 .. 3180518 - -23.7  -4.65263   AGGGCTTAAAACAAA       CCGACCCCGGATC TGCT GATCCGGGGTCGG        TTGATGCGTTTTGAC 100 40
      clpP_2 NONE
      clpP_1 3178905 .. 3178941 - -19.5  -3.81488   TGGGCGGAAACAGAA    CGCCGGTGCGGTCCA TATTTCG CGAACCGCACCGGCG    TCGTTTTACTGTCTG 100 41
        clpX 3177409 .. 3177422 -  -3.1  -3.83026   TTCGGGCACAGGAAA               CTCCT CGAC AAGAG                TGGAAACGGGCGTGG  55 87
NtRootA1_28570 3176696 .. 3176709 -  -4.5  -3.83214   CCAAACCAACGGAAA               GATCC TCGC GGACC                GGCGCACGTCACGCT  58 89
NtRootA1_28540 3171921 .. 3171934 -  -4.5  -2.70932   CTTCGCCCCGAATCA               GCAGC AGTG GCTAC                GCGGTCCACCAGGTT  42 109
        ileS NONE
NtRootA1_28510 NONE
NtRootA1_28500 NONE
         ndk 3164941 .. 3164981 - -24.4  -3.48772   AACTCCGCGAGATAA  CAGTTAAGGCCAATGTTC TTTGC GAACATTGGCCTTAACTG  TTATCTCGGTGAGGC 100 45
NtRootA1_28470 NONE
NtRootA1_28460 NONE
NtRootA1_28450 3160393 .. 3160432 - -28.8  -3.95584   CTGGCAGCAACGAAA  GAGTCCCGCAGCATCCGC CGAA ACGGATGCTGCGGGACTC   TTATTGCTCTACGAC 100 71
NtRootA1_28440 3158457 .. 3158467 -  -5.4  -2.59742   TCCAAGGGGCATAAC                 CCAA GTG TTGG                 CGTAAGCACCGAAGA  46 244
        rplU 3157989 .. 3158002 -  -5.3  -3.13141   GAAAATCTGAACAGA               GTAAC GAAA GTTAC                TTGATGCTCGTGATC  49 22
        rpmA 3157629 .. 3157660 - -27.4  -4.17316   ATGCGGTTAAAAGAA      CGGTGGAGCGGGCC GTTT GGCCCGCTCCACCG       GTTCAGAACTTGTTG 100 41
         obg NONE
        proB NONE
        proA NONE
NtRootA1_28380 3153013 .. 3153059 - -10.9  -3.35996   CACTTGCAGCCACAA GGTGGCCGTGATGGATAGGATC AAAA GTTCC-ACCCATCACGCCCAGC CGGAGCCTGCGCTCC  73 71
        nadD NONE
NtRootA1_28360 NONE
        rsfS 3150724 .. 3150743 -  -3.5  -2.85366   CCGAAAATTCCAAAT            CGGGCAT ATTCGG ATGCCAG             CCTATGTTTAGAGCT  41 33
NtRootA1_t00350 3150518 .. 3150554 - -20.3  -5.08824   GCCGCACGCAAAAAA    GGGTCTGCCCTTCTTCA TCA CGAAGAAGGGCAGAACC    TCAAGAGTGGAGCTG 100 31
NtRootA1_t00340 3149401 .. 3149434 - -20.5  -2.98447   CGAGGGACCAGAAAG     CAAAAGACCCCGCTC ACCT GAGCGGGGTCTTTTA      TCCGAAGTGGAGCTG 100 31
        rlmG 3147570 .. 3147582 -  -3.4  -3.87318   AACGATGAGACTAAA                TTCC TGTCT GGAA                GCGCCGGACCGGCTC  55 39
NtRootA1_28310 NONE
NtRootA1_28300 NONE
NtRootA1_28290 3143874 .. 3143908 -  -4.3  -3.58343   CCGATCACGGCCAAA    GCGATGT-CTG-CCGCA ATC CGCGGCCTGGACATCAC    GGCTTCTGCTCCCTG  51 22
NtRootA1_28280 3143074 .. 3143092 -  -7.5  -3.57462   TACCCTACGGCGAAA             TAGTCGA GGACA TCGACTA             GCCCTTTACCGAGCC  60 23
NtRootA1_28260 3141733 .. 3141753 -  -2.5  -2.54723   GGCGAAGATGAACAT            CTTCGAC TTCACGC GTCGGAG            GAGGCTGGGCATCCG  38 48
NtRootA1_28250 NONE
NtRootA1_28240 NONE
NtRootA1_28230 NONE
NtRootA1_28220 NONE
NtRootA1_28210 NONE
NtRootA1_28200 3136234 .. 3136250 -  -3.6  -3.13403   GGCCGCCGATGAAGA              CGGCGT GGTGG ACGACG              AAATCCTTTGGGAGT  45 98
        nrdH NONE
        nrdI NONE
       nrdE2 3131338 .. 3131373 - -17.6  -3.17075   GGGTTCTTAAGGTAA    GCGTACGACGGCGGGT GGTG ACCCGCCGTCGTAATC     TTTAGTTTTGCAAGC  91 77
NtRootA1_28140 3130190 .. 3130229 - -20.8  -3.26834   AAACTACATCAGCAA  CGACGAAGTCCCCGTCCC AAGT GGGACGGGGACTTCCTTG   CAAAGCCGACGCCAG 100 125
NtRootA1_28130 3129486 .. 3129509 -  -5.2  -3.04398   GCGTGCCTTCAAAAC          CCTGACCTGC AAGA GGAGCTCAGG           TCCTCCATCACGGAC  49 220
NtRootA1_28110 3126861 .. 3126897 -  -4.9   -3.5393   ATGAGTTGGTGGAAA    GCCTGCCCAGCATCGAG ACC CTGGAGGCCGAGTTGGC    CAGGCGGGACGGTGT  55 56
NtRootA1_28090 NONE
NtRootA1_28080 3125204 .. 3125235 -  -2.2  -3.68073   GATTTCATCGAACAA      CCTGCCTCTCAATTC ACG GAATTG-GCGCCTGG      CATGTGTTGATGAAA  51 66
NtRootA1_28070 3123640 .. 3123673 - -22.5  -3.18264   GCCGCCACGCAGCAA     CGACGCGCCG-CGGAC CAG GCCCGGCGGCGCGTCG     AACGGTTGGCGTGAC 100 40
NtRootA1_28050 NONE
NtRootA1_28040 NONE
NtRootA1_28030 3120521 .. 3120531 -  -6.8  -3.54459   TCAATGGCGGTGAAA                 GCCT CCT AGGC                 CAAGAGAGACCGGAA  60 20
NtRootA1_28020 3118091 .. 3118101 -  -4.6   -4.5442   TTCCGAAGTAGAAAA                 CCGC CTC GCAG                 CCTAAGGCATTCACT  70 36
NtRootA1_28000 3116636 .. 3116646 -  -8.2  -3.13788   ATCGAAGGCAACATA                 CCGG GCT CCGG                 CGCTTATGTCGTGGG  58 315
NtRootA1_27970 NONE
NtRootA1_27960 NONE
NtRootA1_27950 3110789 .. 3110808 -  -4.2  -3.14211   ATCCGTTCCGACGAA            GGCG-GCCA AAG CAGCGCGCC            GACGACCCGATTCAG  45 37
        thrS NONE
NtRootA1_27930 NONE
NtRootA1_27920 3107252 .. 3107262 -  -2.4  -5.03994   GTGTAGACACAAAAA                 CCCC TAT GGGT                 AGATAAACGACCTTT  77 240
      pdxS_2 3106259 .. 3106304 - -16.3  -4.60041   ACCCAGCCTTAAAAA CGGAACGACGGGCGCCGATCC GGAAGT GGATCAGCGCCCGCCGT--CG TATGTTTGGTAACGC 100 41
NtRootA1_27890 3102590 .. 3102612 -  -5.5  -3.40403   CCTGGGCTACGAGAA           CCACAGTGG ACAAA CCACCCTGG           GCCCCGGCGTCCAAC  55 292
        pdxT NONE
NtRootA1_27850 3099206 .. 3099224 -  -5.2  -4.07568   TGTTTGTTGTCAAAA             TAGAAGGG CTG CCCGCCTA             GTCGGCGTCGAGGGC  64 23
        ruvC 3098577 .. 3098588 -  -5.8   -3.1676   ACATATCTACGAATA                CCCT AGCA AGGG                 GTTCTCCGAATCACC  49 36
        ruvA NONE
        ruvB 3096791 .. 3096802 -  -5.8  -4.11394   AGTCTAGTGGGAAAA                GCTG AATA CAGC                 GTGTTAACCGATGGT  66 29
NtRootA1_27810 NONE
        secD NONE
        secF 3093326 .. 3093350 - -17.2   -4.3665   CAAGTCAAAGAGAAA          GGACCCCGCT GTAAA AGCGGGGTCC          TCCTCCAGGACGTAA 100 58
        relA 3090787 .. 3090807 -    -6  -3.78934   GGTTCCCCACAAGAA            GCGTGCGC TCGCT ACGCTCGC            ACGGCTCGTGCCCCC  61 44
NtRootA1_27740 3085934 .. 3085945 -  -5.8  -3.62275   AGGGATCATTGCAAA                GACG ATCC CGTC                 CGAGTTTACCCGCCT  55 69
        aspS 3084055 .. 3084092 - -19.9  -3.15544   GGTCATCTGCAGGAA   CACCAAGGGCCCCCCAC ATCA GTGGGGAGCCCTTGGCT    ACCGTCTTATTCGGA 100 32
        yobR 3082836 .. 3082846 -  -8.2  -4.27316   TCCTGGAATCCAAAA                 GCGG CAA CCGC                 TACGTTCAGTCCAGA  79 385
NtRootA1_27700 NONE
        rpsD 3080112 .. 3080141 - -20.1  -3.92373   TACCCTACCTACAAA       GAAAGCCCGTGGC GTGT GCCACGGGCTTCC        TTGTAAGCGCTGCTT 100 45
NtRootA1_27680 NONE
NtRootA1_27670 3079279 .. 3079297 -  -6.6  -2.52543   ACCCTTCTCAATTCA             CTGCACAC GTT GTGCGCGG             AACCGGCTGTTGCCG  48 94
        alaS NONE
NtRootA1_27650 NONE
NtRootA1_27640 NONE
      aroE_1 NONE
        aroC 3072142 .. 3072166 -  -9.9  -3.44051   GGCCGACGAGGACAA          CGGGACGGCCA GAA CAGCCGTCCTG          AATTGGGCGGCCCAC  68 40
NtRootA1_27600 NONE
        aroB NONE
NtRootA1_27580 NONE
         efp NONE
        nusB 3068765 .. 3068802 - -19.4  -3.99324   CTGCACTAGCAGAAA   GAGAAGGACCCGCATCC TGCGT GGATGCGGGTCCTT-TC   AAGCCTGATTGAGAC 100 91
        pyrR NONE
        pyrB NONE
        pyrC NONE
NtRootA1_27510 NONE
        carA NONE
        carB NONE
        pyrF NONE
NtRootA1_27470 NONE
         gmk 3057397 .. 3057419 -  -5.4  -3.29144   CTAGCGGGCCGACAA           GTGCAAGCGC TTA GCGCTCGTGC           GGGGTTAGCCCCATG  51 13
        rpoZ NONE
NtRootA1_27440 NONE
        metK 3054392 .. 3054428 - -20.2  -3.39895   CCGCGCAGGAACGAA    GGATGCCCGCAGCGGG ATCGA CCCACTGCGGGCATCT    CTCTGGCTCCAGCCA 100 99
        priA 3052094 .. 3052116 -  -5.6  -4.56775   AGCTTGTGGCAAAAA          CGTTCC-CG CAGGTC CGTGGAACG           TGCCGGAGACTTCAA  76 135
NtRootA1_27370 3046205 .. 3046222 -  -2.7  -2.52666   GGAAAGGAAAACTAT             TCCAAGA GACA TCTTTGA              CTCCTCATTTTTCTG  38 189
NtRootA1_27360 NONE
      glpK_1 3043645 .. 3043665 - -11.1  -4.60797   CCCGGACACACAAAA            GCCCCTCGA CAA TGGAGGGGC            GGCCGCTCGGCTGTT  93 233
        leuS 3040991 .. 3041030 - -12.8  -2.53911   GCAACCTCCAACGCA  GGTGACA-GGCCGCCGGCA CAG TGCCGGCGGCCGTGAAATC  CCTTACGCCTCGTTA  71 38
NtRootA1_27330 3039993 .. 3040008 -  -2.4  -3.31263   AGGCTATGTGGATAA              GCTCAC GTGG GCGTGC               TGCTCTCCCCCACGA  44 12
NtRootA1_27320 NONE
NtRootA1_27310 3036995 .. 3037009 -  -6.4  -3.10715   TTGATGACCATCGAA               CCTGCA GAT TGCAAG               GCACTAGGCGCCCTG  51 503
NtRootA1_27290 3035428 .. 3035451 - -19.6  -4.26903   CTGAGCTGATCAAAA          GGCCGGCACC CATG GGTGCCGGCC           TTTTGGGTTAACCGA 100 64
        lepA 3032354 .. 3032366 -  -5.5  -2.70525   GTCGCCCAAAGGAAG                GACGC TGG GCATC                TACTTCTTGGCCTTG  46 25
NtRootA1_27250 3030716 .. 3030736 -  -8.9  -3.61894   AACGCTCCTGAAGAA            CCGGGCAGC GCC GCTGGCCAG            CCCCAGTACCATGGC  65 425
        hrcA NONE
       dnaJ2 3027343 .. 3027357 -  -2.7  -4.63218   CGGGCGTGAAGAAAA               CGGGG TTGCT CACCG               CTACAGGTTACCGAG  66 26
NtRootA1_27200 3026391 .. 3026409 -  -3.7  -4.52857   ACCGGCCAGACAAAA             GCCACAG GAGAG CCGGGGC             AATTCGGCGTCTTCT  69 198
NtRootA1_27180 NONE
        ybeY NONE
NtRootA1_27160 NONE
         era 3021336 .. 3021347 -  -2.2  -3.34517   ACCTTTCCTCAAACA                CGTGG ATC CC-CG                CAATCATAGTGGCCG  46 94
NtRootA1_27140 3019609 .. 3019649 - -23.4  -3.43492   GTAGAGGTACTACAA CGAATGGCCGG-CCCCTGG ATAA CCCGGGGTCCGGCCATTCG  TCTTTGGTCCCGCCT 100 116
        leuA 3015610 .. 3015647 - -25.8  -3.64831   CCAAGAAGGACACAA   GACCGTGTGGTGACGG TATTTC CCGTCACCACACGGTC    CAGGCGTTAGGCCCG 100 32
        recO NONE
      uppS_2 3013679 .. 3013691 -  -4.8  -3.85698   CGCCGGTTGGACAAA                GGCA GTGCT TGCC                GGCCATAAAACGGTA  60 320
        pyrD 3008986 .. 3009010 - -21.5  -3.28416   CACTACTTACACGAA          GACCCCGGACC ATT GGTCCGGGGTC          TTCGTGTTACGGGGT 100 68
NtRootA1_27030 3006627 .. 3006683 -  -5.2  -2.75064   GCCCTTACCCAATTA CGTACGG-GTTATAGCTCCATG-CTACG TCG CGCAGACGCTGAGCTATAACTCCTGACG TAACCACAGACTGCA  47 104
NtRootA1_27020 3006032 .. 3006042 -  -2.4  -3.59979   TCCCGGCAGGCCAAA                 GGCC ACC GGGC                 ACACTAAAAGTTTTA  47 156
NtRootA1_27010 NONE
       ctaD1 NONE
        ctaF 3002926 .. 3002972 - -30.5  -3.19026   CATGTGAAGAGGCAA CATAACGACGACGGGCCCCACC TTTT GGTGGGGCCCGTCGTC-TTATG CTGTTCTGCTGTTAG 100 41
NtRootA1_26970 3001535 .. 3001576 - -27.5   -3.5944   AGTTACAGCTTGAAA CCAGGGAAGGGCACGATCC ATAC GGATCGTGCCCTTCCCTGT  TGCATTTGCCATCAC 100 70
       trpD1 2995679 .. 2995689 -  -4.6  -3.55444   CGCGCATTCCGGAAA                 CCGC TGA GCAG                 ATTTCGGCCATCCAG  55 306
NtRootA1_26890 2994403 .. 2994417 -  -4.9  -3.78329   CTCGATGAATGGAAA               GCCCG GCATG CGGAC               CTTCTTCCGGACCTG  58 256
        poxB 2991484 .. 2991513 -  -2.7  -3.37761   CGCCAACAAAGTGAA       GGCGGAGAGCAGC GAAG ACTCCTCTCAGCG        CCGGGGAATATTGCG  46 20
NtRootA1_26860 NONE
NtRootA1_26850 2990048 .. 2990058 -  -8.2  -2.50816   CTTCGAGGCAGGAAT                 GCCG CTG CGGC                 TATCTGTCCAGCAAG  53 155
NtRootA1_26840 2988876 .. 2988905 -  -8.6  -2.52987   GCAAGATCGACGAAG       CAGTG-TCAGCCG GCGCA CGGCTGCTCACTG       GTGGCACCTTGGACG  53 511
NtRootA1_26780 NONE
NtRootA1_26770 NONE
NtRootA1_26760 2982695 .. 2982706 -  -5.8  -3.33696   CGGTGGGCGAACCAA                CCCA TCCA TGGG                 GAATCGCGACGCTCA  52 149
NtRootA1_26730 2981337 .. 2981350 -  -4.5  -4.00042   CCGGGCAGGAAACAA               CCTCG ACGC CAAGG                GCTTCAAACGAGGGC  61 152
NtRootA1_26710 2980038 .. 2980068 -  -7.6  -2.71712   GGCTGGCTCGCAAAT     CCTGGGCG-GCTGGC TTGC GCC-GCACGCCC-GG      CGCTTGTTCCATAAA  52 418
NtRootA1_26680 2975833 .. 2975845 -  -5.5  -2.78384   TCGCCTGTTACTACA                GTGAG GCG CCCAC                CCAAGCCCACGCTGT  47 55
NtRootA1_26670 2975076 .. 2975115 - -11.5  -3.26319   AAGGGTGCACACGAA  GGATCCCCCGGAACTGTT ACTGG AACT-CTCCGGGGGACCC  CTCGCTACCAAGTAG  71 82
NtRootA1_26660 NONE
NtRootA1_26650 2973057 .. 2973081 -  -2.7  -4.73682   CCTCAGAACACAAAA          GAGCCCTCCGA CCG TAAGAGTGCCC          GGCGCATATTGAGGG  70 65
NtRootA1_26620 2968878 .. 2968924 - -17.3  -4.25104   TTGGTGGCACTAAAA GGGCCACGCCCCTCCATCAACC TGAA GGCTG-CGAGGAGGCGTGGCCC CTCAGTAGTGTTGCT 100 55
NtRootA1_26610 2965718 .. 2965740 -  -2.7  -2.89881   TATGCAGCCGACACA          CTG-CACGCA TTAT TCCGTGGCAG           ACCAAAGTGACAATT  40 473
NtRootA1_26580 NONE
NtRootA1_26570 2961495 .. 2961515 - -12.5  -3.17229   AGCCGAGGACGAAGA            GCCGGCGGC GAA GCCGCCAAC            GGGTCCTAGGCCGGG  76 31
      fusA_1 2958894 .. 2958912 -  -2.3  -4.18018   CGCTGTTATGGAAAA             GGCCGCA GAGCT TGCAGGC             GATGAACCGTTGTGG  59 405
NtRootA1_26540 2957248 .. 2957271 -    -6  -3.53224   CATCTCCCGGCTAAA          GAGTTCCAAG GTTG CCTGCAACTC           ACGAAAGGCGGGTGT  58 238
NtRootA1_26530 2956076 .. 2956112 -  -2.2  -3.96327   ATTCCGGATCACAAA   GTGGTCCA-GGCGCTCC TGGC GGAGCTCGGTGAACCAT    TGCTGTCCAGCACGC  54 258
        dasR 2947706 .. 2947720 -  -7.8  -2.74514   GGAAATTCTCAACGA               CCTCGA ACT CCGAGG               GATGGCCACCCTGTT  52 493
NtRootA1_26410 2944268 .. 2944280 -  -5.5  -3.21595   AAGCGCGACCATGAA                GGTGA TTT CCACC                TGTTGCCCAATCTGC  51 204
NtRootA1_26400 NONE
NtRootA1_26390 2942692 .. 2942704 -  -4.8  -2.53263   GGTATTGGGAACGCA                GGCA GAAAG TGCC                AGCATCAGGACCGGA  43 177
NtRootA1_26380 NONE
NtRootA1_26370 NONE
NtRootA1_26360 2940210 .. 2940220 -  -2.4  -4.75372   ATCACCGACGAAAAA                 GGCC GCC GGCT                 TTCCACTGCCCGGAT  72 109
NtRootA1_26340 2936993 .. 2937008 -  -3.2  -2.56715   ATCCTTAGGAACGTA              CGGC TGTTAGTG GCCG               GCCTCGTACCAGCTG  40 16
NtRootA1_26330 NONE
NtRootA1_26320 2934320 .. 2934349 -  -7.7  -3.64703   TGTCGGTCAGGCAAA       CCGCTGCCGCCCG GGTC CGGACGGCAGAAC        ACGGCAAAATACCGG  66 159
        rpsA 2932730 .. 2932767 - -18.5  -3.74693   TCGCACCTGACTAAA   GCAGAAGGACCCCTGCC GCAT GGCAGGGGTCCTTCTTT    GGCTATTCAGCGCAT 100 60
NtRootA1_26280 2930241 .. 2930255 -  -4.2  -3.14132   TTTTGTCCGGATTAA               TGTCCC GCT GCGACA               GAAGAATACGACGGC  45 7
        uvrB NONE
NtRootA1_26260 2926863 .. 2926891 -  -4.5  -2.78596   CAGCGCCGTAGTAGA        TGTGGTAGTCACT TCA AGAGACTACAACG        TTCACAGTATGGTTA  44 38
NtRootA1_26250 2925424 .. 2925435 -  -3.6  -3.75332   ACCTCTCAATGGAAA                CCGC CGCG GCAG                 TCCGTGGGCTTCAGA  54 148
         tam 2918722 .. 2918759 -  -4.1  -3.33696   TTGCTGCTCAATGAA   GCGTCTATGGTCC-ATGC CGA GAATTAGACCAGCGACGC   GGAAAGGGTACAAGC  49 92
NtRootA1_26190 NONE
      uvrA_2 2915307 .. 2915318 -  -4.4  -2.59564   CTCTTAGCGCAGAAT                TTCC GCAA GGAA                 GGTTGCGGTGTGGCT  43 2
NtRootA1_26170 NONE
NtRootA1_26160 2913786 .. 2913817 -  -3.1  -3.09327   CCAGTCTAGTGAACA     GGACCGACAGCCTACG CCA CGT-GGCT--CAGTCC     ACCGACTTGCTTTGG  43 19
        uvrC NONE
NtRootA1_26140 NONE
NtRootA1_26130 NONE
        whiA 2908628 .. 2908640 -  -3.4  -3.57462   CAGGCCAGCCGGAAA                TCCT TGGGG AGGA                AGCTTGCTCCTGCCG  49 109
NtRootA1_26110 2907826 .. 2907853 - -24.2  -3.34895   CTTACGTTTAACTAA        GCCTGCCCCCGC AACT GCGGGGGCAGGC         TTTCCAGTATTTGGT 100 97
        gapA NONE
         pgk 2905365 .. 2905398 - -26.1  -3.32997   CGTTGATAAATGGAA     CAGCCGGCAGGACGC GTGG GCGTCCTGCCGGCCG      GATTGCTGTTTAGCG 100 35
        tpiA 2904475 .. 2904485 -  -6.8  -3.78778   GGATGACATGAAGAA                 CGTC CAC GACG                 GCCTTTCGAAGAAGC  63 58
        secG 2904183 .. 2904215 - -10.6  -2.72461   GAATGGTTCCGAAAT     TCTGGGAAGGCTCCC TTGC AGGAGCCTTCCC-GC      GCGAACTATTAGGAA  63 34
      rbpA_2 2903551 .. 2903573 -  -7.6  -3.02511   GGTAGCGGGCGAAGA           CAAGGCCGGC GCT GTGGGCCTTG           CCTTGGCAGGGGCCA  54 115
        ctaB 2893977 .. 2894017 -   -16  -4.07246   CGAGGGGAAACGAAA  GGCACGACGCCGGTACCC GGGGT GGGATGCGGCGTCGCGCC  TTATTTGTGGTCGCG 100 102
NtRootA1_25950 NONE
NtRootA1_25940 2888378 .. 2888389 -  -2.2  -2.53263   GTCATTGTTAACCGA                CGGA CCCT TCCA                 TCTGCAGTTCAATCA  38 6
        sufD NONE
NtRootA1_25920 NONE
NtRootA1_25910 2885851 .. 2885868 -  -3.4  -2.74488   GAACGATCCTAACTA             GC-CCTG TACGG CAGGAGC             AACGGCAACGCCTGC  41 5
NtRootA1_25900 2885435 .. 2885477 - -22.2  -3.53091   ACGTCGCCCGGTAAA CGCAGAAATGGTTCCGGACC TAA GGTCCGGAACCATTTCTTTG CCCCTGGAGGGCGAA 100 50
NtRootA1_25880 2883054 .. 2883076 -  -4.6  -3.08679   TTCCGGCATGGAAGA           GCCGCTACCC AAG GGGACGCGCC           CGGGCATCATGGTTT  47 7
NtRootA1_25870 2881808 .. 2881857 - -14.3  -2.71364   GGACGTGCCCAACTA GGTCGCAGCTGAGCGCGTTTTGA CGGC TCTAAACGCGCTCTAATGCGACG CAGTTGGGTCAGAGC  80 34
NtRootA1_25830 2877844 .. 2877886 -  -9.2  -3.56092   CGAGCACGCGGCAAA TCCG--GCGCGCCGC-GTAGC GAAC GCAACCACGGCGCGCATCGGA TGCAGAAGTGAACAG  69 44
NtRootA1_25770 2874733 .. 2874743 -  -6.8  -2.72028   GTGACGACAAAAACT                 GGCT GAT AGCC                 TCAGTGCGTGCCGCT  51 41
NtRootA1_25760 2873830 .. 2873865 - -24.2  -3.60971   ATTTCAACGGTTAAA    CAGTTGTGGCCCGGAC GCGC GTCCGGGCCACAACTA     ATCCTGCGAGGTTGC 100 41
NtRootA1_25750 2871980 .. 2872007 - -19.8  -4.43012   ACTGGAAGAGTAAAA        GGGGCGGCCGCG CATT CGCGGGCGCCCC         TTTCGGTTTCACGTC 100 108
NtRootA1_25720 2868923 .. 2868941 -  -8.1  -2.79183   TCGATCTTCAGCACA             CCATCGC GGTGG GCGACGG             CGCCAACGACCTCGA  54 173
NtRootA1_25700 2867280 .. 2867299 -  -4.8  -2.80443   CCACAGTCGACCAGA            GGTCCGCC TAGC GGCGGGCG             GTTGCGGTGTAGCGG  44 13
NtRootA1_25690 NONE
NtRootA1_25680 2865195 .. 2865230 -  -6.9  -3.75153   GGGCTTCAACCGAAA    CTGCACCCTC-ATACG CCGGC CATCTCGAGGGCGCAG    CGACCGCCGGAATCC  62 377
NtRootA1_25540 2852927 .. 2852945 -  -8.9  -2.70298   GCGCCCAACCAGAAT             TGAGTCC GCCAT GGACTCA             GGCTTGAAGCGGTAA  57 243
NtRootA1_25520 2850564 .. 2850575 -  -3.6   -4.3739   TACTCCTTTAGAAAA                GCCG TAAA CGAC                 GGAAACTCAGGCTTG  65 32
NtRootA1_25510 2849151 .. 2849176 - -14.7  -3.18582   CACGGGATGCATGAA         TGAGCCCCCGC GAAA GCCGGGGCTCA          TTCAGCTACCACTGG  86 58
NtRootA1_25500 2848638 .. 2848669 - -20.8  -2.57881   GAACGCTCGCAGAAT      GCCAGCGCGGGGAG TCAC CACCCCGCGCCGGC       CCCTTTTGCACTACT 100 253
NtRootA1_25480 2845985 .. 2845998 -  -3.8  -3.05384   CTTTTGTTCACGCAA               CTGG ATTTTG CCAG                CTGCCAGGTATGAAT  45 131
       rpmE2 2845644 .. 2845676 - -26.5   -5.0925   CCGGAAAACGAAAAA      GCCCGCATTGCTGGA AAT TCCAGCAATGCGGGC      TTTCGAAAAGCCTTG 100 53
NtRootA1_25460 2844112 .. 2844136 - -11.3  -3.53444   TGATGCCTCCGTAAA          GGCGGCAGCGT GGG ACGCAGCCGTC          AACACTACCGGGCTG  71 395
NtRootA1_25430 NONE
NtRootA1_25420 2839104 .. 2839126 -  -6.3  -2.52464   TCGGGGGTCAATGGA          GCAGGGGTCCC TCT GGG-CCC-TGC          CATCCGGATCATTGT  48 34
NtRootA1_25410 NONE
NtRootA1_25400 2837220 .. 2837269 - -18.9  -2.72558   AGAATCGTTGAATGA GTTTACAGATTTGGCCCCTAGGAA TGC TTCC-AGGGGCCATATCTGTAAAG AAAAATACTTATGCG 100 34
NtRootA1_25360 2832888 .. 2832931 - -27.5  -3.54935   GAAAGCTTGGCCAAA CCACGACGGCGCCGTCCCC AGTCAA GGGGGCGGCGCCGTCGTAG TTTTCACTGCTTTTC 100 65
        atoB NONE
        fabG NONE
NtRootA1_25310 2826186 .. 2826198 -  -9.1  -2.64218   AGGGCCTACGACAAT                GGAGC CAC GCTCC                CCCTAAAGTGGCGCC  57 3
NtRootA1_25300 NONE
NtRootA1_25290 2824624 .. 2824640 -  -2.3  -3.18264   GGTCTCATGGACTAA              GAATAGA ACA TATATTC              GAATAAGGCTGAGGG  44 62
NtRootA1_25280 NONE
NtRootA1_25270 2822959 .. 2822978 -  -4.8  -4.06419   TCCGCGCACAAAGAA            GGCCCCGG GAAA CCGGGGTT             TTTTTTGTGCCTTCA  62 101
NtRootA1_25260 NONE
NtRootA1_25250 2820027 .. 2820057 -  -3.8  -3.53012   CTGGTTGCGCCGAAA       GGTCTATTCCGTGC AAC GCACGGTTTAGTCA       GCTGCCAGGTTCCTC  51 74
NtRootA1_25230 2819461 .. 2819481 - -18.3  -5.43487   AAACGACACAAAAAA            CCGGCCACC GTC GGTGGCCGG            TTGGTTGCCGCTTAT 100 68
NtRootA1_25220 NONE
NtRootA1_25210 NONE
NtRootA1_25200 NONE
NtRootA1_25190 NONE
NtRootA1_25180 NONE
NtRootA1_25170 NONE
NtRootA1_25160 NONE
NtRootA1_25150 NONE
NtRootA1_25140 NONE
NtRootA1_25130 NONE
NtRootA1_25120 NONE
NtRootA1_25110 2804504 .. 2804520 -  -7.2  -3.44334   GGAAACCAACAGCAA              GGACCC ACACG GGGCCC              TCTGTCGACGTCATC  60 288
NtRootA1_25090 2800669 .. 2800691 -  -5.5  -4.28254   TCCGAATACGCAAAA          CCCGGG-ACG GCGC CGCGCCCAGG           CAGCAGCATCCTGGA  71 120
NtRootA1_25060 2797044 .. 2797060 -  -5.1  -3.11178   CAACCAATCCGAATA              TTCCCTG GTG CAGCGAA              AGCCGGAGGAAGAGC  48 427
       uppP2 NONE
        mshC 2793913 .. 2793927 -   -10  -3.24076   CCACCACAGAAGACA               GTTCCC TTC GGGAAC               GGTTGAACCTGGAGG  64 437
NtRootA1_25010 NONE
NtRootA1_25000 NONE
NtRootA1_24990 2790164 .. 2790174 -  -2.4  -4.09685   CCTTAGTCCCGAAAA                 GCTC AGG GTGC                 TGTGTGACATCCGGA  56 64
         arc 2788245 .. 2788261 - -10.1  -2.52464   CGGTTTCGGAACCCA              TGACGCG CAT CGCGCCA              CCTACAGGCAACCTT  62 69
NtRootA1_24970 NONE
NtRootA1_24960 NONE
        prcB NONE
        prcA NONE
        pafA 2783263 .. 2783283 - -14.1  -3.20164   GCAGATCCAAGGCAA            TGGCCTCTT GGA AAGAGGCCA            CAGTCCAGAATAGCC  86 71
        fkbP NONE
NtRootA1_24910 2781742 .. 2781789 - -21.4  -2.90496   TCCTGGGCGAAAGCA GCAAGGCGCGTCACCGGTCCGGC AAA GCCGGAA-GGTAACGCGCCTTGG CAGGAAGCTTGCGCC 100 41
NtRootA1_24900 2779555 .. 2779595 -  -3.2  -3.04322   CCTAACTCGTGAACA  GTGGCCATGAATTTCCTG AACAG CCGAAAACCCAAGGTCAC  GTGAAGGAGCAACGA  43 98
NtRootA1_24890 NONE
      tatA_2 NONE
        tatC NONE
NtRootA1_24860 NONE
NtRootA1_24850 2773327 .. 2773350 -    -6  -4.40358   ACGGACTTTACAAAA          GC-TGTCAACC AGG GGTTGACCTGC          GCGTTCGTGCATCGT  72 83
NtRootA1_24840 2772191 .. 2772224 - -26.1  -4.90917   AAACTCAAGCAAAAA     GGCCGGACCGGCTCC TTTG GGAACCGGTCCGGCC      TTTTCTTGTGGAAGC 100 46
NtRootA1_24790 2766877 .. 2766901 -  -2.8  -3.45054   GTGGACAAGGCAGAA         CTGCGGTCGCT TTGC AGCAA-CGCGG          AACACTCCCTACGGT  49 114
NtRootA1_24770 2765575 .. 2765597 -  -3.2  -3.29144   TCAGTTGTTCGAGAA           GGACCGACGC CGG GCAGCCGCCC           GCGCATCCTTGCAGG  46 181
      uvrA_1 2760001 .. 2760013 -  -7.7  -3.16055   CAAAGTTCTGAGTAA                GTGTG TGC CACAC                AACGTGGTCTAGTCA  57 119
        lppF 2758295 .. 2758307 -  -6.2  -3.12327   TCTGGAGATCGAACA                GCCC GTCAG GGGC                ACAGCTGTTCTTCTT  51 331
NtRootA1_24700 2756156 .. 2756181 -  -3.9  -3.95584   GTGCCAGTAACCAAA         TCCTTTACCGG GCGC CCAGTTAAGGG          CATTGCCGTCTGGAT  60 52
NtRootA1_24690 2755060 .. 2755071 -  -5.8  -4.51174   GCAGGACAAGGAAAA                CCTC AACC GAGG                 ACTTCGGCCAGATGG  72 466
NtRootA1_24670 2753098 .. 2753121 - -15.2  -2.62425   AAGCAACCGCACAAC          GGCCCCCGGC TTAG GCCGGGGGCT           TTGCTGTGTCCGCTC  81 237
NtRootA1_24650 2750092 .. 2750119 -   -17   -3.3506   CGCAAAGTGCCACAA        CGCCCGCTGAGG GATC CCCCAACGGGCG         TCGTCGTATGCCCGG  90 86
NtRootA1_24640 2749441 .. 2749476 -  -7.4  -2.73875   CTTCGGCTAATACGA    CCCGCAAGCCGCTGTC GATG GCCAGTAGCTCTCGGG     CCCCTTCATCCGGTT  51 118
NtRootA1_24630 2749058 .. 2749075 -  -4.1  -2.75064   TCGCCCATCTAAGTA             CCTGACCA CGG TGGCC-GG             AGAATGAGCGTCAGC  43 1
NtRootA1_24620 NONE
NtRootA1_24610 2747925 .. 2747969 -  -7.9  -3.11088   AAGTTATGCAACACA TTCAGGTCGGGTAGTCA TTATTTCGTGG TGACCACCCGACCTGCT TTTTGTAGACACAGG  57 346
NtRootA1_24580 2745342 .. 2745376 -  -5.1   -2.8154   AACCATGATCCAAAC    CAGCAAAAGAGTTACC ACCT GGCTACT-TTTCGCTG     CGCCCGACCGGAGTT  44 48
NtRootA1_24570 NONE
NtRootA1_24560 2742929 .. 2742959 -  -7.5  -3.30619   AAGTAGCTGCGAGAA       CTCCACTAGGCCA GCCAT TGGCCCAGTCGGG       CAGTCGCCGGAGACA  56 74
NtRootA1_24500 2736988 .. 2737034 -  -7.9  -2.53995   ACGCAGGGCAATGTA GCCT-CGAACGCCTCGTCCGGC TCGC GCTGGACGGGGCATTCGTATGT CCGGTACCTACATGA  53 33
NtRootA1_24460 2734600 .. 2734621 -  -6.5  -3.15663   AGTCAGTGTTACGAA           CGTTCCACA ATTC TGCGGACCG            CAGGCTGACTGGACT  52 135
NtRootA1_24450 2734033 .. 2734051 -  -3.1  -2.87211   AGTGTTGGTGATATA            CACGAGCC GTCA GGCCC-TG             GTTCTACGGTTTCCG  42 29
NtRootA1_24440 2732790 .. 2732804 -  -4.2  -2.76189   GAATCCATGTAATGA               CCTTTC CCG GAAGGG               AATCTTGATCCTGGT  43 105
NtRootA1_24430 2731528 .. 2731561 -  -3.8  -2.60615   ACCCGCTGGAAAGAT     GTCCCCGCTCTGCA AAGAGA TACAGAACGCGGAT      CCTTCTACGAGTGTC  42 209
      bacC_2 NONE
NtRootA1_24400 2727531 .. 2727546 -  -3.2  -3.28712   CGCCGGCTCCGATAA              TTGCGA TCTT TCGCAT               GTCTGGTTTTCCTTC  45 77
NtRootA1_24390 NONE
NtRootA1_24380 NONE
NtRootA1_24370 NONE
      ilvB_2 2721627 .. 2721654 - -17.8  -4.47551   ACGCAACCGAGAAAA        GGGTTGGGGCAGC ATT GC-GCCCCAACCC        TTTTACAAGGAGCCG 100 49
NtRootA1_24330 2717780 .. 2717790 -  -8.2  -2.71712   GGTTTTGGTGGAAAT                 CGCG TTT CGCG                 GAAACGGTCTAGCTT  54 34
NtRootA1_24320 NONE
NtRootA1_24310 2716134 .. 2716160 -  -5.1  -4.10429   AAGCATTCTCGAAAA        GCTCCGCGTGAG CTCC CGCACGC-AAGC         GGCCACCCATGCAAT  63 116
NtRootA1_24290 NONE
NtRootA1_24280 NONE
NtRootA1_24270 2712556 .. 2712567 -  -7.2    -3.767   GAGTTATCGACCAAA                GGCC GCGC GGCC                 GCCGAAACGGTGCAT  63 65
NtRootA1_24250 2710886 .. 2710899 -  -2.3  -3.35679   CGCCGCGACCGATAA               CCAAC GCAT GATGG                TTTCGTGCCTGAAGC  46 105
NtRootA1_24240 2709205 .. 2709221 -  -6.5  -3.66429   AATAACTGCCAATAA              CCCCCAA CGT TTGGCGG              TTGGTGCCCAGGGGT  61 113
NtRootA1_24210 2705059 .. 2705072 -  -2.3  -4.11216   GCTCGACCCTCAAAA               GGGCA TGCC TGGCC                GAGCCGAAGCCATCG  59 151
NtRootA1_24200 NONE
NtRootA1_24190 NONE
NtRootA1_24180 2700534 .. 2700571 - -24.3  -2.52464   CTGTGCCTTAACGCA   TGTCATCCACCCCGGGA ATGG TCCCGGGGTGGATGACG    TGTAAGTGGTCTGGG 100 47
NtRootA1_24120 2692716 .. 2692752 - -14.4  -3.64487   TGACACCTCCAAGAA   CGGCGCCGCGCCCAAGC TTTG GCCTGGACG-GGCGTCG    CCCTGGTCTGAAGGG  95 42
NtRootA1_24110 2692270 .. 2692308 -  -6.7  -4.07568   TCGCTGGGCTGAAAA  GTTGAGGTCCTCACTGCA CGGT TGCAGTGAGGACTGCT-C   GGGCTGTTCTTACTG  66 35
NtRootA1_24060 NONE
NtRootA1_24050 2682358 .. 2682369 -  -7.2  -3.19789   ATAGCGAACACCCAA                GCGG TGAC CCGC                 CAAGCCAGGTCCGTT  56 230
NtRootA1_23980 NONE
NtRootA1_23970 NONE
NtRootA1_23960 NONE
NtRootA1_23950 2670374 .. 2670414 - -12.5  -4.01135   CGTAACAAGACGAAA GCGCCGGCGACGGTG-GC TTTCGT GCTCACCGGCGTCGACGC  TTGAGTGCTGTTGGG  91 95
NtRootA1_23930 NONE
NtRootA1_23920 NONE
         eno NONE
NtRootA1_23900 2665328 .. 2665340 -  -3.3  -3.41878   GGTCGCAAGCGAGAA                CGTCA CGG TGCCG                GCTCCTTGATCGGCG  47 15
NtRootA1_23890 NONE
NtRootA1_23880 NONE
NtRootA1_23870 NONE
NtRootA1_23860 2662623 .. 2662634 -  -5.8  -2.53876   TCTCATCCGAATCTA                CGAG TGGC CTCG                 GTGACCACTGATGCG  45 11
NtRootA1_23830 2659105 .. 2659151 - -22.5  -3.70902   GTCGCCAGAGCGAAA CGCTAAATGGCGTCTGCCTTC GCAAG GAAGGCAGACGCCGTTTAGGG GAGTACTAGGACTTG 100 31
NtRootA1_23740 NONE
NtRootA1_23730 2648484 .. 2648505 -  -2.2  -3.48276   TGCGGCTGTACAGAA           TGTCGGTGC CTAAC GC-CCGGCA           GCGTACCCCTGGTTG  47 13
NtRootA1_23720 2647524 .. 2647535 -  -2.2  -3.21595   AAGGGCGAGCATCAA                GCAC AGGT GTAC                 TGTTTCCGTTTTTAT  44 171
NtRootA1_23710 2646727 .. 2646739 -  -9.1  -2.88215   GATCAGGAAAGAGCA                CTGGC GCC GCCAG                GGTGTCATCGAGCAT  58 138
NtRootA1_23690 NONE
NtRootA1_23680 NONE
NtRootA1_23670 2642847 .. 2642867 -  -2.5  -5.06103   ACAAGCGCTAAAAAA            CTAGGTCAT GCA AGGATCTAG            TGCGCAGGTACCAGA  77 110
      ppsA_1 NONE
NtRootA1_23650 2639339 .. 2639349 -  -5.4  -3.50853   TGCGCGCAAGCACAA                 GGAA TCG TTCC                 AGGAATACGTCGCCT  53 236
NtRootA1_23630 2637694 .. 2637727 -    -3   -4.2704   GCGACGAGGAACAAA     GTCTCGACGCGCTC GATCGT GAGGCCGTCATGAC      GCTCACCGCGGACGA  64 335
NtRootA1_23610 NONE
NtRootA1_23570 2630668 .. 2630699 -  -2.7  -4.77165   TTGTGCAGAATAAAA      CGCCGCGGCCGGG TCAGAG CCTGTCTGCGGTG       TTTAGCGGGTTGGCG  70 7
NtRootA1_23560 NONE
NtRootA1_23550 NONE
NtRootA1_23540 2627471 .. 2627487 -  -9.3  -2.87243   CCACTACTACAATGA              CGGGCTC GAC GTGCCCG              GTGCCTCGCAACGAG  58 376
NtRootA1_23450 NONE
NtRootA1_23440 NONE
NtRootA1_23430 2611802 .. 2611813 -  -5.8   -3.7941   GACGTCGCACAACAA                CAGC GCCC GCTG                 ACCAAACAGCAAATT  60 111
NtRootA1_23360 2605898 .. 2605925 -    -7  -3.03124   TGTCACTTCTGAAGA        GCGGCATTACTCC CGA GGAAGA-TGCCGC        CAACCACGAAGGAAC  54 142
NtRootA1_23190 NONE
NtRootA1_23180 NONE
NtRootA1_23170 2583984 .. 2583995 -  -2.2  -2.78463   AGCGCCGGCATTAGA                CCTC GGGC AAGG                 TGCACTCGTGCCCGT  39 9
NtRootA1_23160 2583076 .. 2583109 - -15.3  -3.28712   CCGTTCTGCCGAGAA     GCGCGCGTGTCAGCT GGGG AGTTGATACGCGCGC      TTCTTGCTTTACAGC  87 128
NtRootA1_23140 2581475 .. 2581518 -  -5.8  -3.18681   CCCCAAGTCTATGAA CGCCGGCGCAGCCGTTGCCA TCGC TGTCAACGACTGGGACGTTG TGACAGTCAGGGTCA  51 309
NtRootA1_23010 2568774 .. 2568790 -  -5.1  -3.61398   TGTGTCCTTGAATAA              CACTGCC TGC AACAGTG              AAGGAACCCGGGCAT  53 146
         lig NONE
NtRootA1_22920 2557784 .. 2557797 -  -3.8  -3.53444   CCATGCCGGTGGAAA               CCAG GACGTT CTGG                AGCGCAGCCTTCGGA  51 151
        fabF 2555749 .. 2555772 -  -9.4   -3.6502   CACTCGTCAGCGAAA          CGGGGCGCGC CTTC GCCCGTCCCG           GGGAATCGCTGGTGG  72 249
NtRootA1_22840 2551300 .. 2551310 -  -2.4  -3.29511   TTGACTTTGCGACAA                 CCAG CGG CAGG                 ATCCCGAGTCTCTTC  45 292
NtRootA1_22810 2549378 .. 2549399 -  -4.4  -2.75481   CGTTAATTCGAACTA          GCTGACGCCG CGGT CGGCG-C-GC           ATATTGGGCCTTAGG  44 36
NtRootA1_22800 2549084 .. 2549100 - -12.3  -2.78463   AGCGGCCGCATCACA              GGTCCTC GCC GAGGACC              TTGACCCGGTCGCGG  70 4
NtRootA1_22790 2547280 .. 2547290 -  -5.4  -4.25283   ACTTCCGGATGAAAA                 GTTC GAG GAAC                 TCTTCACGGCTGACG  68 363
NtRootA1_22760 2542710 .. 2542727 -  -3.3  -3.90298   GGGAACCAAACACAA             GGCCCTC CGCG AAGGGGC              AGTGATAGCAATGGA  56 370
NtRootA1_22740 NONE
NtRootA1_22730 2539089 .. 2539101 -  -5.5  -3.65201   CAACACCGGCAACAA                CACCT ATA AGGCG                GTGGAGCAGTCCTCC  57 169
NtRootA1_22710 2536141 .. 2536162 -  -5.7  -3.28712   TCTGCCTTCCGACAA           GGTCGCCGC CGTT GCGGCCATC            CCTGTGCGACCGGTC  52 408
NtRootA1_22660 2530458 .. 2530472 -  -7.8   -3.2327   CCAAGGCATGACCAA               CCGCCA AAT TGGCGA               GGAGATGCTGCTCGC  56 183
NtRootA1_22640 2529285 .. 2529314 - -18.7  -2.71144   GATTCCGGGGAAGCA       TCTGGCGCC-GAGC GGT GCTCCGGCGCCAGA       TATCTGCCCTCCCTA 100 38
NtRootA1_22630 NONE
NtRootA1_22620 2526825 .. 2526857 -  -3.4  -3.28712   CCGGGGCCCGCACAA     CTCCCTGAGT-GCTT CCCA AAGCTACTCCGAGTG      CTTCACTGCATGGAC  45 14
NtRootA1_22560 2520122 .. 2520146 -    -7  -3.16492   TCACACGGATCAATA          TCTCCCCGGC TTTGG GCCGGGGATC          TGTCCGATTTCCTTG  54 164
NtRootA1_22550 2519096 .. 2519116 -  -2.5  -3.33696   CTCTGGTGTAATCAA           CGCCGGGA CTGGTT CCCCGG-G            CACTTATAGCCTCGG  46 123
NtRootA1_22540 2518605 .. 2518635 - -16.9   -3.8709   AAAGTTCCCGACAAA       TCGATTGGCCCGG TGAGG CCGGGCCAAACGA       CTACTCCCTGGTGAT 100 26
NtRootA1_22500 NONE
NtRootA1_22490 NONE
NtRootA1_22480 NONE
NtRootA1_22470 NONE
NtRootA1_22460 NONE
NtRootA1_22450 2507312 .. 2507339 - -14.8  -4.42238   CCAGGGCAACCAAAA        GCACGACGGCGA CCAT CCGCCGTCGAGC         CTTACGCCTGGGCGG 100 55
NtRootA1_22440 NONE
        ctpF NONE
NtRootA1_22420 NONE
NtRootA1_22410 NONE
        yfiL NONE
NtRootA1_22390 NONE
        yfiM 2499303 .. 2499329 -  -3.6  -4.17023   CGAAGGACTCTAAAA         CCTAAGCAGTGG ACG CCAGTCCTTGGG         ATGACCCGTCGAAAA  62 71
NtRootA1_22370 NONE
NtRootA1_22360 NONE
NtRootA1_22350 2497438 .. 2497449 -  -5.8  -3.42996   GATTATTGACGAGAA                CCTG GCAT CAGG                 ACCCGCGCAGGCTAG  53 37
NtRootA1_22340 2496943 .. 2496979 -  -9.4  -2.50816   CGGCCAGGCAGCAAT   GCCAAGCCTGCGGCGAA AACC TTCACCGCGTGC-TGGC    TTCAGCAGCGGACCC  59 11
NtRootA1_22330 2494946 .. 2494970 -  -3.4  -2.56095   CGTACACCGAAGTGA          TGACTGGTCG TATAT CGACCCGCCG          GGCTGGACGCGGCTA  39 317
NtRootA1_22300 2491317 .. 2491329 -  -5.5  -3.30159   GCAATCTGCGGAGAA                GGCTG CCC CAACC                AACGGTATCTGCCGA  51 468
NtRootA1_22290 2490783 .. 2490795 -  -3.3  -2.60212   CCAGCATTGTAGAAG                CGGGT ATT AACCG                GGGCAAGACGGATGA  40 70
NtRootA1_22280 2489604 .. 2489619 -  -2.4  -3.85698   CGGCGCTCGCAGAAA              GCCAAG GCAT CACGGC               CGCTGCGCTCGCGGG  54 431
NtRootA1_22220 2482250 .. 2482270 -  -3.9  -3.63515   CTGCACGTCGAACAA            CTGGGCAAG AGC CTCGCCGAA            CTTCCGATGGTCCGC  53 201
NtRootA1_22180 NONE
NtRootA1_22170 NONE
NtRootA1_22160 2477514 .. 2477547 - -16.7  -2.73364   GTCCGATGTTAACGA     GGACGACGGCGGGAG TCAC CTCCCGCCGTCGTGA      GCCGTTCGGCTTGCC  87 65
        katG 2474129 .. 2474166 - -27.9  -4.08945   ACTAGGTTTCGAAAA   GTGTCAGGGCCGGCTGC AGTT GCAACCGGCCCTGACAC    CACTGTTCAGTTGAA 100 45
NtRootA1_22130 2472426 .. 2472448 -  -5.5  -3.36803   GAAGGCCATGCAGAA           GCCGCGC TCAAGGAAC ACGCGGC           CATCCTTAAGGCACT  52 175
NtRootA1_22110 2470203 .. 2470220 -  -3.3  -2.78596   GATGCCCTGACCAGA             CGTCGCC AGAG GGCAACT              GCCGTACACAAACTC  41 52
NtRootA1_22100 NONE
NtRootA1_22090 NONE
NtRootA1_22080 NONE
NtRootA1_22070 NONE
NtRootA1_22060 2465395 .. 2465428 - -19.7  -3.53298   AGGACTTTAAACCAA     GGAGGTGCGGTGG TGTAGAAG CCACCGCACCTCC      TACAAGAACTTAGTG 100 35
NtRootA1_22030 2460564 .. 2460574 -  -5.4  -3.29144   CTAGCTGGCGTAGAA                 GGAA CGG TTCC                 TGCCGTCGATTAGTG  51 0
NtRootA1_22020 2459401 .. 2459432 - -11.7  -3.75897   AAGGGGCAAGCGAAA      GTA-CCGGCAACCA TCTTG CGGTTGCCGGGTAC      CTCGGCTATCTCAGG  81 49
NtRootA1_22010 2457251 .. 2457264 -  -2.3  -3.73402   ACAGTCCGGAGGAAA               GCGGT GCTG ACCGT                GCACGACGATGACCG  51 107
NtRootA1_21960 2451478 .. 2451494 -  -5.8  -3.47307   GGAACATGACCATAA              CGACTC TGCCC GAGCCG              TGTGAAGGGCGGGTG  55 119
      lacI_2 2438886 .. 2438905 -    -5  -2.91924   GCATGGGTGACAAAG            TCCGTTCA GTGC TGAACCGA             AATCGGCGTGGCTTG  46 11
NtRootA1_21870 2437691 .. 2437715 -  -2.8  -3.55444   TTTTCACCGTCTAAA          TGTCACGG AGAACCGGG CCGTGGCA          GGTGGTCGGCTGAGG  49 138
NtRootA1_21860 2436142 .. 2436195 -  -4.3  -2.62184   TTTCTGTTGACATTA TCTGTTCCTTCCCAGGGGAGCCTGA CTTC TCAGGCTCCCCTGATATCGGGCGGC TATTTCTTGTTGGCC  42 25
NtRootA1_21850 NONE
NtRootA1_21840 2434266 .. 2434311 - -24.2  -3.25015   CGGAATCATTAGCAA CACCGCAGGCCCCGTAACCGC TGGAG GCGGTTACGGGGCCTGCT-TG TTGAGTTGTCGGACC 100 64
NtRootA1_21790 NONE
NtRootA1_21780 2430118 .. 2430153 -  -5.2  -3.61715   GACCCCTGGGAAGAA    GACGGCGTCGCAGCGA CCAT CCGCTTCAGCACCGGC     AACACCGGCGTCCTG  55 391
NtRootA1_21720 NONE
NtRootA1_21710 2424612 .. 2424641 -  -5.7  -3.63627   GCTTTATAGCGGAAA       TCTTTCAAAGACC TCCA GGTCCCCGAATGA        GATCGGTTGCTGAGA  58 142
NtRootA1_21700 2422944 .. 2422957 -  -6.7  -3.35679   CGGCGCCATGTAGAA               GAAGG CTTC CCTTC                ATAACGCACTATGAA  56 81
NtRootA1_21690 2422014 .. 2422024 -    -4  -4.21908   GATTAGCATTGAAAA                 TTGA TTT TCAA                 TAACGCCGTTCAGCT  62 86
NtRootA1_21680 2421134 .. 2421172 -  -6.6  -4.14511   AATCGGATCTCAAAA  TGTCACGGACCCGCTGG TATCGC CCTGCGGGCCCA-GACG   GAACTTCGCGACTGC  69 40
NtRootA1_t00320 2418466 .. 2418482 -  -3.5  -3.67296   GAGCATCGACGGAAA              CGTCCGG ACC CTGGGCG              GGAACCGTAGCTCCC  52 327
NtRootA1_21560 2407226 .. 2407251 - -10.3  -2.77013   CACGGCGTCAAGAAG         CGGCGGCTGGA CGGG TTCGGCCGCCG          TTTCGCTGCACTGTC  63 337
NtRootA1_21490 2397543 .. 2397562 -    -2  -2.90075   CTTTCGTTAAGGAGA            CGGGCATG GAGG CATGCTCT             GAGGAGGCCGCAGCG  40 81
NtRootA1_21480 NONE
NtRootA1_21470 NONE
NtRootA1_21430 NONE
NtRootA1_21420 2388877 .. 2388890 -  -5.9  -3.67976   TCGAGCAAGTCGAAA               GCGCC TACC AGCGC                GGAACATCAAGGGGT  58 16
NtRootA1_21400 2387177 .. 2387191 -  -3.4  -3.21695   GGAGTAGCAAGTGAA               GCCGAC CTT GCCCGC               TGCCGCCTCGACCAG  45 241
NtRootA1_21390 2386088 .. 2386099 -  -5.8  -3.28712   TGCTGCGCGGCAGAA                GCCT TCGC AGGC                 CCTGGCGATACGTCG  51 118
NtRootA1_21380 2384839 .. 2384856 -  -7.7  -2.62396   GATGTTGGGAGATGA             CCGTGCGG GCG CCGCA-GG             CGTGAAAGCCCTTGG  53 116
NtRootA1_21370 NONE
NtRootA1_21360 NONE
        idnO 2381135 .. 2381149 -  -3.5   -3.6543   CAATGTTGTAAAAGA               GCACC TGGGT GATGC               CTCCAACACAAGTCT  52 156
NtRootA1_21340 2379582 .. 2379602 -  -3.9  -4.66535   AATGGGCAAAAGAAA            GCTGTGCAC ACT GTGCAGACC            TTGGGCTTCGGATCG  70 274
NtRootA1_21280 2370290 .. 2370302 -  -3.3  -3.30124   CTGCACCCCCGAGAA                TCCCG GCC CCGGA                GACAGGTTCACGGAA  46 159
NtRootA1_21240 2365061 .. 2365075 -  -3.4  -4.30576   TGCGCACCACGAAAA               CCGGGG TTT CCTCAG               CGGCCGCGAGCTGGA  64 200
NtRootA1_21210 NONE
NtRootA1_21200 NONE
NtRootA1_21190 2361537 .. 2361549 -  -6.2  -3.02144   GCAGCGCTCTGAAGA                GCCG TTTAT CGGC                ATTTGCTGCTTTCGT  52 52
NtRootA1_21180 2358888 .. 2358900 -  -4.7  -2.87463   AACTCCCCCTATAGA                TCCCG GTC CGGGT                CACCTTCCATGAGAT  46 6
NtRootA1_21040 2341679 .. 2341707 - -21.1   -4.7373   TCAGCGCACCAAAAA        GGAGGCCGGATCA TCG CGATCCGGCCTCC        CTTTGTCTTCAGTCT 100 40
NtRootA1_20930 2326188 .. 2326198 -  -8.2  -4.71426   TCTGGAGGAATAAAA                 CCCG CAG CGGG                 AGCTAATACCCCAAG  83 433
NtRootA1_20910 2323815 .. 2323828 -  -2.4   -3.1994   CACATGAGCTACGAA               CTGT TCCTCG ACAG                CAATTGCGCCATGGC  44 5
NtRootA1_20900 2321727 .. 2321757 -  -5.2  -3.17941   AGGAGAGCGGATCAA       CATCGGGGCGGCTC ATC GTGCCACCTCCACG       ATGATCGAGCCGCTG  51 7
NtRootA1_20890 NONE
NtRootA1_20880 NONE
      hemL_1 NONE
NtRootA1_20860 2316875 .. 2316923 - -11.8  -2.84602   TTCATTTCATTAAAG GTCGGCGGATGGTGCTGGACCC TGCATGC GGGGCCAGCACCAT-C-CCGTC AGAGGAGGGCTACTG  70 24
      atrB_1 2315516 .. 2315531 -  -5.4  -3.24708   GACTGTCGAAAGAGA              CGAAGG CATG CCTTCA               GAGGGCAATACCAGT  51 178
NtRootA1_20760 2302121 .. 2302132 -  -3.6  -3.88766   ACTCGATATATGAAA                CGCC ATGG AGCG                 AGGAATTCCAGGCAG  56 263
NtRootA1_20690 NONE
NtRootA1_20680 NONE
NtRootA1_20670 NONE
NtRootA1_20660 NONE
NtRootA1_20650 2286766 .. 2286786 -  -6.1   -2.7535   CCGCCGAACACATGA            TCGTCCAAC ATG GCTGCACGA            AGCTTGCGTTCCTTG  46 497
NtRootA1_20630 NONE
NtRootA1_20620 NONE
NtRootA1_20610 NONE
      oppD_1 NONE
NtRootA1_20590 NONE
NtRootA1_20580 NONE
NtRootA1_20570 NONE
      uxuB_2 NONE
NtRootA1_20550 NONE
NtRootA1_20540 2272698 .. 2272710 -  -5.5  -3.90112   GGTCGCCGAAGGAAA                GGCAC GCG GTACC                GAACGTGACAGCCCT  61 208
NtRootA1_20530 NONE
NtRootA1_20520 2271815 .. 2271838 -    -6   -5.1101   TGACGATCGAAAAAA          GCGGA-TCGTG GGA CACGAGTCCTC          CTAATATGCATGCGT  89 47
NtRootA1_20510 NONE
NtRootA1_20500 2269620 .. 2269648 - -16.1  -3.60296   GACCTTGACGGTAAA        TTCCCGGGCGA GTTGAGA TCGCCCGGGAA        TTTCTGGAGTTCGGA  90 158
NtRootA1_20490 2269020 .. 2269031 -  -5.8  -3.28712   TGGTCGGTGGGACAA                CTCC TAAG GGAG                 GCTTGGCTGGTTACG  51 172
NtRootA1_20480 2268729 .. 2268757 -  -3.7  -3.53091   ACGGGGCTGCCTAAA        CACTGACCATTCC AAC GATAGGGACAGTG        CTTACCAGCAGACGT  51 27
NtRootA1_20470 2264904 .. 2264917 -  -5.2  -3.34895   GGCACCCTGAAGCAA               CGCC TGGAGC GGCG                AATACCGCCGACCGT  53 360
NtRootA1_20420 2261670 .. 2261688 -  -5.9  -4.19276   TGAAAATGCGCAAAA             CCAGGGC GTCGA GCCCTCG             GCTCCCGGAGTCACC  66 370
NtRootA1_20380 2259076 .. 2259088 -  -6.3  -2.75064   GTCGCCACGGAATCA                TCATC CTC GATGA                ACCCACTGCTTCACT  49 36
NtRootA1_20370 2258409 .. 2258422 -  -3.8  -3.54475   CTTGGTAGGACACAA               CAGC AAAGGA GCTG                CAATGTCACTCAACT  51 189
NtRootA1_20360 2256947 .. 2256969 -  -7.6  -4.20768   AGGCCGAAGAAACAA           CAGCCAGTGC GGG GCGCTGTCTG           CGGCAAAAGCTTCGG  74 46
NtRootA1_20350 2255840 .. 2255880 -  -2.3  -2.99719   TCTATAAAGATTACA  CGGGGGTGGCGCACGGTCA ATG TAATATCGCGTCACCGCCG  CTGGGGCTCCCATGC  40 89
NtRootA1_20340 NONE
NtRootA1_20330 NONE
      paaH_1 2252615 .. 2252668 -  -6.7  -3.01924   TAGCGCCTTGCAATA GCGGCC-AAAAGGTCC-GCGTAGCC CCAACT GGCGGGGCCGGACCTTTTAGGCAGC TTTTGCCGGAGACGG  52 236
NtRootA1_20300 NONE
NtRootA1_20290 2249558 .. 2249611 -  -9.5  -2.69964   CCGTCAACGAGAGCA CGGACCGG-GTCCGAACCCTGGATGA CTA CCATCGTGGATCTGGACACCAGCCCG GCCAGTGGGACACAA  60 392
NtRootA1_20020 NONE
NtRootA1_20010 NONE
         php 2214498 .. 2214513 -  -2.5  -2.64274   ATCGCGGGAAATGTA              GTCCC GCTCTA GGAAC               CGCCCCGTCCGCCCG  38 18
NtRootA1_19990 2213825 .. 2213849 -  -5.7  -3.74747   CGAATCGGGACCAAA          GGAGCGC GTTCAGCCCGA GCGCTCC          GGAATATCCGTAGCC  58 357
NtRootA1_19970 NONE
NtRootA1_19960 2209915 .. 2209933 -  -3.1  -3.53012   TCCTTCCCGGGCAAA            GGACGCCA AGAT CGGC-TCC             AAGCTAATAGATGCT  49 181
NtRootA1_19930 2206069 .. 2206087 -  -6.6  -2.52464   CCGGCGTGGAAGGGA             CCGGCAGC TAC GGTGCCGA             ACTCTCACGCGTACT  48 131
NtRootA1_19900 NONE
NtRootA1_19890 2201951 .. 2201963 -  -3.4  -2.78816   GGATGTGGCAGTACA                TGTG GTGGT CACA                GCTGGCTCACCGTCT  41 21
NtRootA1_19880 NONE
NtRootA1_19870 2195776 .. 2195796 -  -9.7  -3.06696   TGTCGGGCCAAGAGA            GGTGTGCAC GTT GTGCACACT            TAAGTCTGTTTTGTT  64 413
NtRootA1_19850 2194109 .. 2194147 -  -2.2  -4.19704   GAACTGCAGCCAAAA   CCGGGCACCCTCGCCACT GTC ACCGGCCCAGATACCCAG   GATGTCCCGTTCCCC  59 229
NtRootA1_19830 2193240 .. 2193259 -  -9.2  -2.76037   ACTGCAAATGACAAT            GCGCTCGG CATG CCGATCGC             TATCTGAAGCAGGCA  61 277
NtRootA1_19800 NONE
NtRootA1_19790 NONE
NtRootA1_19780 NONE
NtRootA1_19770 NONE
NtRootA1_19760 2185194 .. 2185235 - -15.1  -2.76736   AACGAGGCAACATGA CTGTCCAGCCGCCGTCTTCA TCG TGGCGACGGCGGCTGG-CGG TACCGTGTCTGGTAG  83 69
      lacI_1 2183880 .. 2183890 -  -6.8  -2.91264   CCTGGCACGGATAGA                 GCAC CGT GTGC                 TGCCGCACAGTCCGA  50 208
NtRootA1_19730 2180277 .. 2180307 - -21.3  -3.84712   CAAGCCTAGACGAAA       TGGGCGAGGCACT GTTGT AGTGCCTCGCCCA       CTGGTGTTCCAGACC 100 75
NtRootA1_19650 NONE
NtRootA1_19640 2167197 .. 2167207 -  -2.4  -3.86202   CGGCACGAGATGAAA                 TCGC GGT GCGG                 GCGCTGCGGGTCTTC  54 263
      tatA_1 2162811 .. 2162838 -  -4.1  -4.13767   TCCCGTACTCTAAAA        GCC-GATAACCG TGATT CGGTCAACTGGC        TAGTGGGTTATGCCC  62 137
      hisC_2 NONE
NtRootA1_19580 2158608 .. 2158645 - -27.3  -4.64334   AATCCCGGAACAAAA   GAAAGGTGGTACAGGCC GACC GGCCTGTACCACCTTTC    TTCTTTGGCTTCGCT 100 65
NtRootA1_19450 NONE
NtRootA1_19440 2143921 .. 2143941 -  -4.7  -3.89346   CGCTCATCGGATAAA           CGG-CCCT CGCAGC AGGGTCCG            TATGTTGAGCAATAA  59 258
NtRootA1_19430 2143223 .. 2143237 -  -2.8  -4.40572   AGAACTCCGAGAAAA               TCACTG GCC CAGCAA               GGCTGAGTTACGCGC  64 33
NtRootA1_19420 2140794 .. 2140821 -    -9  -3.70902   CCGTTGACATCCAAA        TTCGGGGGCGGC AACT GCCACCACCGGA         CTATATGAACATTGT  69 285
NtRootA1_19410 2139395 .. 2139422 -   -17  -3.07307   GAAATGGTTATTCAA        GGAGGCGCGGAC CGAT GTCCGCGCCTCG         ATGGATTGTTATCTC  89 34
NtRootA1_19400 2136287 .. 2136308 -  -3.7  -3.85698   CGCTTTCTCGACAAA           GCCA-GCG TCCCTCC CGCTTGGC           CACTGGGGATGGACA  57 496
NtRootA1_19340 NONE
NtRootA1_19330 2123791 .. 2123828 - -25.7  -3.60627   GGATCGCAGTGGAAA   CTAGTGGGAGCCGGTCC TTTC GGACCGGCTCCCACTTG    TTTTAGTGCCTTTGC 100 40
NtRootA1_19280 NONE
NtRootA1_19270 NONE
         fer NONE
NtRootA1_19250 2114619 .. 2114639 -  -3.1  -3.63627   TTCGGACACCTGAAA            GTCGACGGC GTT GCGGCCGAA            AAGCGGGCTTCAGCA  51 517
NtRootA1_19130 2100726 .. 2100750 -  -7.7  -3.01712   TCGTTTCGGCGAAGA          CGCGCCGAACC CCG AGATCGGAGCG          AGTTAGTGCGCTTTT  56 357
NtRootA1_19120 NONE
NtRootA1_19110 2098173 .. 2098189 -  -2.2  -3.36823   GTGGTGAAAAGGTAA              CCCG AAATTGTGA CGGG              TGCAACAATTTCTTT  46 260
NtRootA1_19100 2096700 .. 2096749 - -19.5  -3.14211   ACCGCTGTGCAGGAA GGACACTCGTTGTGGTGCGTTAGT GCG ACCA-CGCACCACAACGGGTGTCA CCGGGCGGCCGGTGC 100 69
      purU_3 NONE
NtRootA1_19050 NONE
      folD_3 2086600 .. 2086629 - -20.1  -2.88999   CGGGCAGAGACGAGA       GATGCCCCGCTCCC TAA GGG-GCGGGGCATC       TGTTGCGACGACCTC 100 141
NtRootA1_18980 2079557 .. 2079568 -  -2.2  -2.54634   CTGCACATCATCAAC                GCACC GAC GG-GC                AGAGGTCCCATCACT  38 225
NtRootA1_18940 NONE
NtRootA1_18930 NONE
NtRootA1_18920 NONE
NtRootA1_18910 NONE
NtRootA1_18900 NONE
NtRootA1_18890 2065784 .. 2065802 -    -6  -2.62184   TGGGCTCTGACATCA             GTCGTCAA CGC TTGACGAT             GTATCCGTGCTGTTC  48 11
NtRootA1_18880 NONE
NtRootA1_18870 NONE
NtRootA1_18860 NONE
      ilvB_1 2061234 .. 2061266 - -27.9   -3.5032   GCTTGAGACGAAACA      GAAGGGCCGGACGCT GGC AGCGTCCGGCCCTTC      CTCGATCACGGTTAC 100 58
NtRootA1_18820 2057654 .. 2057673 -  -3.6  -4.57837   ATATGCTTTGAAAAA            GAGCTTCGG CCG CCGAAA-TC            AGGGACCCGCGGTGA  70 24
NtRootA1_18790 2055737 .. 2055758 -  -3.5  -3.33696   TGGGTTCTGAAGGAA           GCGTCGGGG CTTG CCCGGTCAC            ACCGCAGCGGTGCTG  47 22
NtRootA1_18780 2054183 .. 2054193 -  -8.2  -3.53012   GCGGCCCGGCGCAAA                 GGCC AGT GGCC                 ATCGACCACGCACCG  62 430
NtRootA1_18770 2053197 .. 2053215 -   -11  -3.14132   CTTTTTCGGCAGCAA             TCGCCGAC GAG GTCGGCAA             GGACCCGAGACGGTG  67 79
NtRootA1_18750 2050496 .. 2050529 -  -2.4  -4.08216   GGATGCCGGGGAAAA     GCCACTA-TGCTGCC ACCAA GGCAGCTCTAATGGG     GCTGGGACGGACGTG  57 366
NtRootA1_18650 2039243 .. 2039253 -  -2.4  -3.53091   ACCGGGCCCTCTAAA                 CGGC CAG GCTG                 GGACGCGTCGCCATC  47 10
      fruR_1 2038084 .. 2038105 -  -6.5  -2.79796   TGTGAGCCCATTAGA           TGCGCGACCA ATG TGG-CGCGCT           GCGAGAATGTGCAAA  49 311
NtRootA1_18610 2035685 .. 2035696 -  -4.4  -3.27743   CACCACCAATCAACA                GGAA CGGG TTCC                 AGTGGGTGTGAGGGT  49 43
NtRootA1_18600 2033829 .. 2033855 -  -7.2  -3.81488   CTGCCGCAAACAGAA         GAACCGAGGCCT GGA AGAACCCGGTCC         ACGTTGCGGGGTTCA  66 351
NtRootA1_18500 2021729 .. 2021741 -  -6.9  -3.86897   GGCAGGGGGCACAAA                CCGCG AGC CGCGA                GAGTACTTGGAATGG  66 178
NtRootA1_18490 2019658 .. 2019692 -  -7.8  -3.36878   CGCATTCACCGAGAA    GCGGGAGCC-CCGGT TCACAC ACCGATGACGCCCGC     TGGCCGGGTGCAAGC  61 368
NtRootA1_18450 NONE
        fadB 2013979 .. 2013992 -  -2.3  -3.33815   AGGTTTTGCAATCAA               TTGCC GGAG GGCGA                TTGAGTGCGACCGCG  46 264
NtRootA1_18430 2011591 .. 2011611 -  -5.4  -3.54129   CAGATGCCGCGGAAA            CCCGTCAC TGCAT GTAACGGA            AGATCAGTTGTTAGT  55 305
NtRootA1_18420 2010559 .. 2010586 -  -5.5  -4.14392   GCCCAACCGCGAAAA        CCGGGGCTTGC AAGACG GCAAGCCGCAA         ACCCCTCCGGAGCAC  67 150
NtRootA1_18320 1999603 .. 1999623 -  -2.5  -3.57918   AGGGATAGTATACAA            GCTCCTG TCATCAG CAGTAGC            CGATGGCGATTTTAT  47 54
NtRootA1_18310 1998931 .. 1998953 -  -6.2  -3.54543   AGTTATCTTCCGAAA           CCGACAAGGA CGA TCCTCGCCTG           GGAAGGGTTTCTTTG  58 72
NtRootA1_18260 1993632 .. 1993644 -  -6.3  -5.63103   CTCGAATCAAAAAAA                TAGGA GAC TCCTA                TGACACAGTCATATC  95 143
NtRootA1_18250 1992584 .. 1992606 -   -12  -3.29511   GGGACCTCCTGAGAA           GGTGAAGCCA AGT CGGCTCCACC           TTCGACAGGAGGTCC  75 174
NtRootA1_18230 1991269 .. 1991282 -  -3.9  -3.23899   CTTGAAGCAAGCTAA               TTTAC TTTC GTAAA                GAAAGCTTGTAACGT  47 8
NtRootA1_18220 NONE
NtRootA1_18210 1990001 .. 1990038 - -24.3  -2.95476   AGCACCCAGCACACA   GAGTAGTGCCCCCATCC AAAA GGGTGGGGGCACTACTC    GTAGGCTCGATCAGC 100 93
NtRootA1_18180 1986336 .. 1986349 -  -4.5   -4.2558   GACCCGGCAGCAAAA               CCAGT CTCA ACCGG                GACGAACGCAAGCGA  67 50
NtRootA1_18160 NONE
NtRootA1_18150 NONE
NtRootA1_18140 1980986 .. 1981015 - -11.4  -3.44319   CGCAAGTCATGAGAA       CCCCGAGCCTCA ACGCAG CGAGGCCCGGAG        GACGTTTCGGCTGCT  73 45
NtRootA1_18120 NONE
NtRootA1_18110 NONE
NtRootA1_18100 NONE
NtRootA1_17960 NONE
NtRootA1_17950 1959194 .. 1959209 -  -6.8  -3.64703   CGTCCCTCAGCGAAA              CCCTCG GGAA CGAGGA               AGCCGTCTGTTTCAC  63 201
NtRootA1_17930 1957088 .. 1957108 -  -6.7  -2.71144   CATGCCGGCGAAGGA            CGCTAGCCG CAA CGGCGAGCC            ACCGCAGGCAACGCT  49 448
NtRootA1_17870 1952934 .. 1952953 -  -8.6  -2.62184   CCGCGGTCGAGAGTA            CGCTCGATC GGC GA-CGAGCG            GGAACGCCGAGTCAG  57 65
NtRootA1_17850 1949814 .. 1949825 -  -4.4  -3.59979   GTCGTCGAGGCCAAA                GACT TCGA AGTC                 GCACGGACTCCTGCC  53 493
NtRootA1_17820 1943596 .. 1943623 - -25.6  -3.53012   TTCCTCGGTTTGAAA        GCGGGCCCCGCC GTTT GGCGGGGCCCGC         TTTGTTTTGGGTTGT 100 121
NtRootA1_17700 1927495 .. 1927540 - -11.1  -4.90869   AGGACGAACCAAAAA GGAGATCCGCCGGTGCGTGAAA CGC TATCTCGC-CCGACGGACCTAC CGAACCCTTAACGCC 100 99
NtRootA1_17590 1919146 .. 1919186 -  -3.8  -3.15544   GTGTACGGGGATGAA GACCCTGCCGC-GGCAATC GATC GGCTCCGTGCGGCCGGGTC  CAAGGCCGCAATGGC  47 102
NtRootA1_17500 NONE
NtRootA1_17490 1908561 .. 1908578 -  -9.1  -3.05816   TCACTGTCCATGGAA             GAGCGCG ACCG CACGCTC              CATGAAGTGGGTATG  60 379
NtRootA1_17470 NONE
        atsD 1903598 .. 1903650 - -25.7  -3.53811   CCTACCTTGTCCAAA GGTCATTACCACGCGAAGAGCGGGC ATT GTCCGCTCTTCGCGTGGAAATAGCC TGGTTTGTCCTGTCT 100 45
       qor_2 1901809 .. 1901828 -  -4.2  -3.05596   GAGCGGCCCACTGAA            CCGAACCA GCCC TGATGCGG             ACGGTGCCCCTGGCT  45 110
NtRootA1_17380 1897238 .. 1897259 - -12.9  -4.24342   TCGCCCACCAAGAAA           GGCCCCCGG ATCT CCGGGGGTC            TTTTGCGTTTCTGGG  93 502
NtRootA1_t00290 NONE
NtRootA1_t00280 NONE
NtRootA1_t00270 1896569 .. 1896580 -  -4.4  -4.44667   GCCTTCAACAACAAA                CAAG TTGC CTTG                 TTCTGGTGGGCGATA  70 29
NtRootA1_t00260 NONE
NtRootA1_t00250 1896340 .. 1896351 -  -4.4  -4.44667   GCCGTCAACAACAAA                CAAG TTGC CTTG                 TTCTGGTGGGCGATA  70 29
NtRootA1_t00240 1896195 .. 1896212 - -11.3  -5.60993   GTGGGCATAAAAAAA             GCAGCTC CGAG GAGCTGC              CTTTTTCGTTGGAGC 100 35
NtRootA1_17370 NONE
NtRootA1_17360 1894200 .. 1894249 - -15.8  -3.55444   CGGTTACCGGTTAAA CGCCAA-G-GGCACCGGTGGCGCC TCTC GGCGGGACCGGTGCCCCCTTGACG TATCTGGTACGGCGG  90 51
NtRootA1_17350 1892817 .. 1892831 -    -5  -3.85698   GTCCCCTTCGACAAA               CTCTTC ACC GAAGAA               ATGATGACCGGCGGG  60 132
NtRootA1_17330 NONE
NtRootA1_17320 NONE
NtRootA1_17310 1889630 .. 1889645 -  -2.5  -3.61398   GGCTCCCCGGAACAA              CCCTG GGCAGT CAGAG               GGTGTGTAACGGGCA  47 68
NtRootA1_17290 NONE
        msrB 1887214 .. 1887259 - -15.6  -2.52015   CCGAGATGTAGCAAT GC-GCTTTCCGGGACGGGCCC CGCATGT GGGCCCG-CCCGGAA-GCTGC CTACTTCCTTTCGGA  81 26
NtRootA1_17270 NONE
NtRootA1_17260 NONE
NtRootA1_17250 1883785 .. 1883829 -   -18  -2.63913   CACCATCGCAGATTA TGCGTCCGGGGCGGCGAATCCC TGT AGG-CTCGCCGCCCCGGACA-A TTCCTTGTTCACTTG  87 41
NtRootA1_17240 NONE
NtRootA1_17230 1881658 .. 1881694 -   -13  -3.35679   TCCCGGGACGCAGAA   GGCCCGCCGCGTCGAAC CGTA GTTCG-CGTGACGGACC    TGTGAGCGGGGTAGT  79 44
      fadA_1 NONE
NtRootA1_17210 1878042 .. 1878087 - -20.6  -2.70215   AAAGGCTCATAGAAG GGGAAGGGCAGTGGCGCGG-GC TTTC GCTCCG-GCCACTGCCCTTCTC TCTTGCCGCTTTAGG 100 36
        trkA NONE
NtRootA1_17110 1865202 .. 1865227 -  -4.6  -3.16154   CAACACTACAGGGAA         GGCCGAGGAC TTCTAC GTTCTCGGCT          TCTTCACCAACATTG  48 339
NtRootA1_17060 1862100 .. 1862113 -  -3.8  -4.25104   CGGCGGGCAGTAAAA               TCCG CCAGGC CGGA                ATCCTACCCGGAGCA  62 442
NtRootA1_17040 1860291 .. 1860317 -  -5.1  -2.78384   GCCGGCGCCATTACA        TGCGCCGCGTGA CAGC CCACGGGGC-CA         ACCTGATGGCCGGCG  44 162
NtRootA1_16990 1852298 .. 1852328 -   -19   -2.8352   GGCTAAGGCAAGAAG       CAGGGCCGGCGGTC TGC AACCGCCGGCCTTG       TTACTGTTCCCGTGC 100 58
NtRootA1_16970 1851041 .. 1851063 -  -4.7  -3.09492   CGTGGAAGGGGAATA           GCGCAAGCC CTTCT GGCCGACGC           CCTGCGGCGTTTCGC  47 178
NtRootA1_t00230 1843398 .. 1843416 -  -3.9  -3.17622   GAGGTCCAGAACATA            CT-GGCTA ATTG TAGCCGAG             CAGTTTGCGCAGGGT  47 293
NtRootA1_16920 NONE
NtRootA1_16910 1840977 .. 1841005 -  -3.7  -3.33696   GCGCCTCGTAAGGAA        TTCATCATCGCAG GGG CAGCGACGCTGGA        CCGGGAACGCATCGA  49 50
NtRootA1_16890 1838393 .. 1838422 - -21.5  -4.05788   TGGCTTCAAACTAAA       CAGGGCCCCTCCC GGAT GGGAGGAGCCCTG        TTCTTGCTCGAAGTG 100 80
        pepA 1831082 .. 1831134 - -12.6  -2.61239   TACACACCGCATAAT TCCGGGGTTGTGCGGGTAGCGCGGA CGCA TCCGCTCTACCCGCACTG-CCCGTT CCAACCGCGGTGGAG  71 49
        pdhD NONE
NtRootA1_16820 1827513 .. 1827565 - -30.8  -3.29043   AACGGTCTGGGACAA CAACGAAGCGGGGCAGGCTACCGGG TTTC CCCGG-AGCCTGCCCCGCCTGGTTG ACCAGAGCGCCCTCG 100 70
NtRootA1_16810 1827022 .. 1827056 - -15.7  -4.15044   CTTGCCTTGAAGAAA     GCAGCCTACCCGCCC GGCAA AGGCGGATGGGCTGC     TTCCGCGTACTTTCA 100 38
NtRootA1_16800 1826365 .. 1826414 - -23.8  -2.71731   CTGAGCTGGGAACGA GCGAAAGGCCCCGCGGCCT-TCCC TGAC GGGAGAGGCAGCGGGGCCTTT-GC TTTGATGCTGTCTTA 100 64
NtRootA1_16780 1821463 .. 1821476 -  -8.1  -2.56046   GCAAACGTCAACGCA               GCAGG CTCA CCTGC                CCAAGCGGCGGATGA  53 358
NtRootA1_16760 NONE
NtRootA1_16750 NONE
        lipB NONE
      lipA_1 1818246 .. 1818272 - -11.6  -2.72463   ATGTACGTCGAAGGA         CCGGACGCCA TTACGCT TGGCATCCGG         CCCTTTCGGTACTGC  66 79
NtRootA1_16720 1817374 .. 1817428 - -26.1  -3.80858   CCATAAGCTAGCAAA CACCAATAAAAAACCGCCCC-GTCTC CTTC GAGACAGGGGCGGTTTTTCGTTGGTG CATTCAAGCGCCCAG 100 47
NtRootA1_16700 1815041 .. 1815081 - -34.3   -4.2461   AGCGGCACGAATAAA  GGAGGGCCGGCAACAGGTT TTT AACCTGTTGCCGGCCCTCC  TTATTTTGGAATCTC 100 84
        panB 1807491 .. 1807506 -  -3.2  -4.33621   GACGTAAGTAACAAA              GCGCGGC TGG GCC-CAC              GTGACTCCGCCAACG  64 257
       map_2 NONE
NtRootA1_16610 NONE
NtRootA1_16600 1804629 .. 1804651 - -13.4  -2.71712   GCGGTGTGCGGAAAG           CGTGCCAGGG CCG CCCTGTCACG           GAAGACGATCTGGCC  72 295
NtRootA1_16560 NONE
NtRootA1_16380 1780778 .. 1780798 -  -7.5  -3.01712   GGGTGGGCGCCAAGA            CGGGTACCT CAC AGGCACCCC            GCGAAGATGGACTCG  54 248
NtRootA1_16300 1773967 .. 1773989 -  -5.6  -3.55444   TGTGGAGTTGGGAAA          CCGGCGTCA CTTGAC TGAC-CCGG           CCGCCACGTTGGCGC  55 9
NtRootA1_16290 1772827 .. 1772861 -   -20  -3.44255   ATAAGCAGTTAAACA     GCGGACGACGGCGGTC CTT GACCGCCGTCGTCGTC     CCACGCCTGAAAAAG 100 46
NtRootA1_16260 1770755 .. 1770785 - -19.1  -3.09208   AAACGAGGCAGGGAA       GAGGCCCGAATCC GCGAA GGATCCGGGCCTC       GTCCGAAGGTGCTTG 100 49
NtRootA1_16250 1768625 .. 1768658 - -28.3  -3.52192   GTGAACTCTACAGAA     GAGGGGCGGTCCGGA TCGA TCCGGACCGCCCCTC      TTCTGTTTTTGTCCT 100 44
NtRootA1_16220 NONE
NtRootA1_16210 NONE
NtRootA1_16200 1763697 .. 1763713 -  -3.5  -3.33815   ATTGGTGCGAACCAA              CTCGCCC GAA GGCCGCG              CACTCCTTGAGCGGG  46 410
NtRootA1_16180 1760946 .. 1761002 - -21.8  -2.71731   GTGATCGGCTAACGA TCCACCAATGAAAAACCCCTTCCGGA GGAAT TCCGGAAGGGGTTTTTCGTTTGCGGT GCGTCGTGACTACTG 100 35
NtRootA1_16160 1756373 .. 1756403 - -22.6  -3.20723   GCCTTAGTAACGCAA       GAAGCCGCCCCCGG ATA CAGGGGGCGGCTTC       TTCACGTTGTATGGC 100 55
NtRootA1_16100 1752490 .. 1752526 - -26.7  -3.85165   CACGGGAAAGTGAAA    GCCCGCCGTGGAACGGT TTG AACGTTCCACGGCGGGC    TTTTCAGCGTCTCAG 100 47
NtRootA1_16080 1750567 .. 1750623 - -15.4  -4.21989   TATAACCCCAACAAA GTGTGCTCTTGTTCGCTGAACTCGACGT TGT ACGGCGAGTTCAGCGAACAAGA-C-CGG GTTTTGCGCCTGCCT 100 39
NtRootA1_16070 1749185 .. 1749218 - -18.1  -3.72324   CAGCCCGACCAATAA     GGCCGGAATCACGCG GAAA CGCGGGGTTCCGGCC      TTTGGTCGTTAACGA 100 114
NtRootA1_15970 NONE
NtRootA1_15960 1736943 .. 1736962 -  -2.8  -3.32844   GTTCCTACGGCAGAA            GGCTAG CCCCGGTT CCAGCC             GTACTCGTTCTCCGG  47 8
NtRootA1_15950 NONE
NtRootA1_15940 NONE
NtRootA1_15930 NONE
NtRootA1_15920 1731759 .. 1731775 -  -4.3  -3.38768   GTACAGCATCTAGAA              CAGTCCC TTC GGAGCTG              CTTCGAGGTTGATCA  49 3
        prpB NONE
NtRootA1_15900 1729557 .. 1729602 - -34.9  -2.71483   ACAGGCTTTCAAGCA TACGACGGCGGGCCGGTCGCC TTTC GGTGACCGGCCCGCCGTCGTA TGCTTCCACCGCTAC 100 55
NtRootA1_15880 1727980 .. 1727993 -  -2.4  -3.83323   TGCAGAGAAGGCAAA               CATC ACCAAG GATG                TATCACCCCACACCT  54 216
NtRootA1_15780 1717584 .. 1717618 - -22.2  -3.58208   CCGGACAACAATTAA     CGGGAAGCCCCGACCA CCA CGGTCGGGGCTTCCCC     ACTTTAACCACCAGA 100 192
NtRootA1_15740 1704865 .. 1704894 -  -7.9  -2.86124   TTCAGGGAAAGAGTA       CGACGTCGGCTC GCGGCTG AAGCCGACG-CG       GGGTTATGGGGGAAG  54 437
NtRootA1_15640 1693998 .. 1694009 -  -4.4  -2.59431   CGGTTCCAGAACCCA                TCCT ATGA AGGA                 TGCCGCCCTTGGTTG  43 48
       qor_1 1692888 .. 1692913 - -19.1  -3.81951   TCTTATACGACGAAA         TCCCCGGAACC TCCT GGTTCCGGGGA          TTTTTTCACTTGCCT 100 93
NtRootA1_15590 NONE
NtRootA1_15580 1686717 .. 1686729 -  -6.2   -3.7941   CATCCCGGATAACAA                GGGC AAGCG GCCC                ATCGACGAGGAAGTG  60 348
NtRootA1_15560 1684941 .. 1684953 -  -4.7   -2.7314   CGGCAAAGTAGAGGA                GGGCG AGT CGGCC                GAAGCTGCCCTTCAT  44 336
NtRootA1_15540 1683385 .. 1683413 - -16.1  -3.97042   TCAGCATTAACCAAA        GGTGGGCTCTTCA AAC TGAAGAGCCCATC        TTTCTTTGTTGCGGT 100 70
NtRootA1_15510 1681338 .. 1681377 -  -9.3  -2.73124   GTTGAGGCTGCAAAG GCT-GCTGGCTTCG-AGCC GGCC GGCGGCGAAGCCCGCCAGC  AGATCAAGAACTAGT  61 162
NtRootA1_15470 1679040 .. 1679052 -  -3.4  -2.73875   CTTCGGGGAACAGGA                TTCC TTCAC GGAA                CAAGAGGTTGCCGGG  41 147
NtRootA1_15460 1678408 .. 1678451 - -32.6  -3.20207   AATACCAGTGACTAA CGACGACGGCGGCCCGACCA CATG TGGTCGGGCCGCCGTCGTAG GTATTTTGGGCAGTT 100 46
        lexA 1670869 .. 1670880 -  -7.2  -3.86897   TCCACCGGCGATAAA                GGCG TGGT CGCC                 GTCCTGGACTCACGG  68 167
NtRootA1_15340 1665858 .. 1665874 -  -2.1  -4.17789   GAAGCACAAAGCAAA              GCCATGG ATG CCTTGGT              CAGCGCAGACGGTCT  59 445
NtRootA1_15270 1660032 .. 1660056 - -17.1  -4.75219   GAATTATTAAGAAAA          GGTCCCCAGCC TAC GGCTGGGGGCC          TTTCGCGTCTGGTGA 100 89
NtRootA1_15190 1651650 .. 1651660 -  -2.4  -2.57564   CGATCGTCTCATAAG                 GGAC TGT GGCC                 GTGCTGTGAAGAGGG  38 67
NtRootA1_15180 1650351 .. 1650378 -  -3.4  -3.59979   TCCGGTGATCGCAAA       CGTGC-CCGCGC TTCAAT GCGCGACGC-CG        TAAAGTTGTTCCGCT  51 42
        moaA NONE
NtRootA1_15070 1641176 .. 1641197 -  -2.2  -4.07568   GCGTGTTCCGGAAAA           CCTGACGGC CAAGC GCTG-CAGG           ACGCGCGGGGTTTGT  56 53
        aspC 1632202 .. 1632215 -  -3.7  -2.52623   CTTCCCGTAGAACAT               GCGCC GGTA GCCGC                CTCCGAGGAGCCCTT  41 87
NtRootA1_14930 1628081 .. 1628108 -  -3.4  -4.37658   AAGCGGGTCAGAAAA        CTGATGGAAACCC GAT GAGTTCCCAGC-G        ATGAGTGCGTAACGA  64 300
NtRootA1_14890 1624686 .. 1624701 -  -3.3  -2.52464   TTTCTGCGGAAGCCA              TGCTT CAAGCC AAGCA               CTGGCGGGCCGCCTT  39 80
NtRootA1_14880 1623966 .. 1623976 -  -8.2   -4.3898   AGTACCCTCAGAAAA                 CGCC GCT GGCG                 CCCAAGAGGGTTCCG  77 7
NtRootA1_14870 1622680 .. 1622701 -  -4.3   -3.6215   TGAAGCCAGTGCAAA           GGCCAAGAT CGTC AACATGGCC            ACCAACGCCGGTGCC  53 234
NtRootA1_14840 NONE
NtRootA1_14830 NONE
NtRootA1_14820 1617535 .. 1617560 -  -3.9  -3.18264   GGGCGTATGGATGAA         TCCGGAGATGC GTGG ACACCACCAGA          GTGCTGGCTACATGG  47 185
NtRootA1_14760 1610868 .. 1610880 -  -9.1    -3.281   CGCGAAGGCAGAACA                TCCGG ATT CCGGA                GGACATGAGCCTCGT  63 272
NtRootA1_14740 NONE
NtRootA1_14730 NONE
NtRootA1_14720 NONE
NtRootA1_14710 NONE
NtRootA1_14700 1604359 .. 1604373 -  -2.7  -3.53012   GGTGGTTCTTCGAAA               GCGCG TTCAG CGGGC               GGCGAAGGCGGCATC  47 17
NtRootA1_14690 NONE
NtRootA1_14680 1602422 .. 1602479 - -25.7  -3.29096   GTCACTAACGACGAA TCCGGCCCTCGTTCGCCCAACACACCGC AGA ACGGCGAGGTGAGCGAAC-AGGGCCGGA TTTGTGGCCGGGCGG 100 64
NtRootA1_14600 1593613 .. 1593635 -  -6.2  -3.70902   GGTCTGACATTTAAA           GAGAACACCT GGA AGGCGGTCCC           AATCTCCCCAAAAAG  61 50
NtRootA1_14590 NONE
NtRootA1_14580 1590866 .. 1590887 -  -2.9  -3.20348   CCTAGGAATACTGAA           CAGCCCG AGAACATA CGGGTTG            ACTGTGCAGGTTGCA  45 170
NtRootA1_14570 1589409 .. 1589419 -  -2.4  -3.38072   GGTACCGAACATTAA                 GGAC GCC GACC                 ACCTGACCCTGCGGG  45 464
NtRootA1_14530 NONE
NtRootA1_14520 NONE
NtRootA1_14500 NONE
NtRootA1_14490 1583364 .. 1583405 - -20.3  -2.51464   CCATGATCCACGAAG CGGGCGCTCCATCAACAGT GGGC AATGTTGATGGAGCGCCCT  GTTCCGGGGACGTCA 100 42
NtRootA1_14480 1582269 .. 1582309 -  -5.2  -3.68244   AGGATTAAGGCCAAA CACGGGGGCTCCTTCTGCC AAGC GGCGGG-GGAGCCCTCAGG  CATGCCAACGCTAAA  58 41
NtRootA1_14450 NONE
NtRootA1_14440 NONE
NtRootA1_14430 NONE
NtRootA1_14420 1576202 .. 1576227 -  -4.5  -3.29511   CCTATGCGCGGACAA         CAGGCGGCCGG TTCC CCTGCAGTCTG          TTAGCGTTCGGTGGC  49 26
NtRootA1_14410 1575247 .. 1575257 -  -6.8  -3.35798   AGTCCGCAGCTACAA                 CGTC CAG GACG                 TGGATGCACTCTGTG  55 212
NtRootA1_14330 1569567 .. 1569596 -  -5.6    -3.214   CGCACGAGATCAACA       CCCTGGTGACTG GACGGG CTATCACCGGGG        TCTCGGCCATCGTGT  51 83
NtRootA1_14310 1565109 .. 1565119 -  -6.8  -3.21695   CGAGGACCAACTGAA                 TGCC ATG GGCA                 AGGTGAGCCGCGAGA  53 349
NtRootA1_14260 NONE
NtRootA1_14250 1559779 .. 1559812 -  -5.8  -3.55622   GCGAAGCGGGGGAAA     CCCCCGGCTGGCCA CCATTC TGCCCTGCCAGGCG      GCCTAAGGGGAGGGC  55 54
NtRootA1_14240 NONE
NtRootA1_14230 1555954 .. 1555964 -  -3.2  -3.87815   GCCTAGCCGGACAAA                 CCAA GCC TCGG                 ATACAGCACCTCGAA  55 2
NtRootA1_14220 1555263 .. 1555294 - -20.3  -3.34043   CGGAGGAGCGCACAA      TACCCCCGTTCCG GTGTTT CGGAACGGGGGTA       TTTTTATACCCCCTA 100 221
NtRootA1_14130 1543621 .. 1543677 - -27.6  -3.51232   CGCGTCTTAAAGCAA CGCGGGGTCACTTACGGCCCATAAATG GCCT CACC-ATGGGCCCTAAGTGACCCCGCG TTGCTTCAGGCGGTG 100 31
NtRootA1_14110 NONE
NtRootA1_14100 NONE
NtRootA1_14090 1540039 .. 1540053 -   -10  -2.52635   ACCTCGACCACCAAG               GCACCA AGC TGGTGC               GCCGGTTCGATGCGA  59 322
NtRootA1_14050 1536633 .. 1536684 - -24.5  -4.33258   ACCCTTAAAGAGAAA TTCGGCCGCCATCGGTGGGTGAC GTCGTT GGCACCCGCTGATGGCGGCCGAA GCTTGAAGGCGTGCG 100 41
NtRootA1_14030 1534903 .. 1534923 -  -6.8  -2.52676   GACTCTTCCAAGGTA            GGCCGC CGCTCCTTT GCGGCC            ATGTCCGGGTATGAC  48 163
NtRootA1_13880 1518016 .. 1518031 -  -4.6  -3.64703   GTGGCCCGACGCAAA              CCAGCC CGGT GGCTGC               ACGGCAGGCAGTGGT  55 158
NtRootA1_13820 1510832 .. 1510860 -  -9.5  -3.34344   CGAGCGTGGAAGGAA        CGCCTGGCAGCAA TAC TTGCTGACGAGCG        CGGCGAAATCATCAA  67 72
NtRootA1_13750 1502748 .. 1502759 -  -4.4  -3.30243   AGTCATCGTCCACAA                TGAG CACC CTCA                 AATCCTCAGCCACTG  49 31
NtRootA1_13740 1502077 .. 1502093 -  -7.9  -3.28712   GCTCGTCGCGCAGAA              GTCCGCG TAA CCCGGAC              GCTTACCTACCTGGC  59 45
NtRootA1_13710 1499343 .. 1499356 -  -4.5  -3.53012   GGGCGCTCCGGGAAA               GTGGA GCCG CCCAC                GAGCACGAGCTCTAC  51 138
NtRootA1_13560 1465586 .. 1465607 - -11.5  -4.56607   GCATGAACGAGAAAA           CGCTGGCCC AAAT GGTCCAGCG            CTTCGAGAACAAATG  95 452
NtRootA1_13510 1460473 .. 1460483 -  -2.4  -2.55216   GACCACCGAGAACAT                 CGGC GCA GCAG                 GCTCGGGCGTTGCCG  38 77
NtRootA1_13500 1458440 .. 1458460 -  -8.2  -3.09516   GCTCTCAGTAGGGAA            GCCGGAGG ACAGA CATCCGGC            AGCGTGCGTCAAAGC  57 91
NtRootA1_13490 1456836 .. 1456877 - -26.7  -3.53012   GCTTTCGCCGTTAAA CCGCGCAATCCCCGGGGGA GAAG TCCCCAAGGGATTGCGCGG  CGCGAAAAGCCAGCA 100 45
NtRootA1_13480 1456268 .. 1456326 - -21.9  -3.81146   GCTTGGAACCAAGAA TCCCGTCCTTGTTCGCGAGTCCCG-ACT TTCA AGTTCGGGTTCTGCGAACAAGGACGGGA TGGGGGACTAAGTAT 100 51
NtRootA1_13470 NONE
NtRootA1_13460 1452574 .. 1452590 -  -7.9  -3.97368   GGCCGAAGTCATAAA              CGCTCTG ATC CAGCGCG              ACGCCGGGCACCACC  71 341
NtRootA1_13450 NONE
NtRootA1_13440 1449764 .. 1449819 - -29.2   -2.7386   AACGTAGCCTAAGCA GCCCTTAACGACGTCGGCTCCGCACC AGAA GGTGCGGAGCCGACGTCGTTAAGTTT TGGTTCTTAGTCCTC 100 32
        narU NONE
        nasA NONE
        nasC 1442766 .. 1442824 - -16.7  -2.63723   GCCCGAGCAACGAAT TCGCGGGAAGCCTGCGAGCACGCAGGGA AACT TCCC-ACGATCCCGCAGCTTTCCCGCGA ACTGAGCGAGCTACC  85 41
NtRootA1_13390 1441539 .. 1441563 -  -4.2  -2.71924   CACGTCCCCGGAAAT          TGCCTCGG TCGGCGTTT CCGAGGCC          GATCTCGCCTCCGGC  42 424
NtRootA1_13370 1439324 .. 1439337 -  -3.7  -3.61654   TACAGCGACGGCAAA               CCCGG GAAG CCGGT                CATTACTTGGGCGTC  53 208
        sacB NONE
        sacC 1433642 .. 1433698 - -31.2  -3.28497   CCACGTCAAAGGCAA CGCGGGGTCAGATACGGCCCATAA ATCCTGTCG TAATGGGCCGTATCTGACCCCGCG TTGCTTTAGAGCGCG 100 31
NtRootA1_13320 1431732 .. 1431746 -   -10  -3.85698   TCGCCGCTGCACAAA               GAGGTC TAT GACCTC               GAAACCGGTGAGTGC  76 137
NtRootA1_13300 NONE
NtRootA1_13290 NONE
NtRootA1_13280 1426089 .. 1426103 -  -2.1  -4.58395   GGGACGGCCCAAAAA              GCTGCG GAAT CG-AGC               CATGCCCTGCTGCTG  68 221
      solA_3 NONE
NtRootA1_13220 1420490 .. 1420530 - -28.4  -5.06451   CACGATTCCAAAAAA  GCCGGAGGGGAGCGACGC TCAAC GCGTCGTTCCCCTCCGGC  GGTTTCTGCGAAGGT 100 41
NtRootA1_13200 1417812 .. 1417828 -  -4.4  -3.68725   AATCGTGAACAAAGA             GCGCAGG AAGC CCTG-GC              GAACCCATTCACGGC  56 68
NtRootA1_13170 1415429 .. 1415445 -  -4.4  -3.83026   TCCTCTCAGAGGAAA             GCTGACC TGAA GG-CAGC              CCCGGCGTGACCGGG  59 137
NtRootA1_13160 NONE
NtRootA1_13150 NONE
NtRootA1_13140 NONE
NtRootA1_13130 NONE
NtRootA1_13120 NONE
NtRootA1_13110 1407624 .. 1407639 -  -2.6  -2.82516   CCGGCGAGCACCAGA              GAA-CGT TTC ACGGTTC              GGTTCCTCCGGCGGT  39 17
NtRootA1_13100 1406255 .. 1406265 -  -5.4  -3.61517   ACCCGCCGGTAATAA                 TGTG GAT CACA                 GTGGAGTTCAGTACC  55 33
NtRootA1_13090 1405190 .. 1405211 -  -7.3  -3.53444   TCACTGCCCGTCAAA           GGACCATCT TGCC ACATGGTCC            GATTGCCAGTCCGGT  60 69
        deoC NONE
NtRootA1_13070 1404113 .. 1404136 - -19.6   -4.0342   GCCAACCAACAAGAA          TGGCCCGGGC ATTC GCCCGGGCCA           TGTCATGTTGCGTGA 100 44
NtRootA1_13040 1397941 .. 1397954 -  -2.3  -3.32844   TCTTTTAGCTCACAA               CATCC TACG GGGTG                TCCGAGGCCACTCCG  46 16
NtRootA1_13030 NONE
NtRootA1_13020 1397101 .. 1397156 - -26.4  -3.06796   TTCCATTCTACCCAA CTAGGTAGCAGTAGAGCGCGTTATGA GGGC TCAAAACGCGCACTACTGCGACCTAG TTGGGCTGGGACGAG 100 43
      nhaA_1 1395392 .. 1395420 -  -7.4  -3.43071   GCGGAGATGAAGTAA       CGCTCCGTCTGGC TGTT GCC-GATGGAACG        GTCAAGCAGATCAGC  60 315
NtRootA1_12910 1379845 .. 1379871 -  -6.4  -3.01712   TTGCTTCTGCCAAGA         CCCTGGAGTCGC AAT GCGATTCCGTGG         TGTACCCCACTGGTC  51 256
      moxR_1 NONE
NtRootA1_12840 NONE
NtRootA1_12830 1367845 .. 1367893 - -34.1  -3.60412   GAACGGTAGAGACAA GCAAAGGGCCCGACTCCGGAGCC ATA AGTTCCGGAGTCGGGCCCTTTGC TGTTCCCACGGTGGG 100 50
NtRootA1_12800 NONE
NtRootA1_12790 1361413 .. 1361432 -  -2.8  -3.80862   AAATCGACGACGAAA            GCG-ATACC TCT GGTGTCCGC            AAGGACACCGTCGCG  55 55
NtRootA1_12760 1358205 .. 1358223 - -10.3  -3.33162   CATTGGATTTGAGAA             CACCAGC GAAAG GCTGGTG             GCTGACGTCCGGCAG  69 66
NtRootA1_12740 1357064 .. 1357102 -  -2.4  -4.49937   TCAACAACATGAAAA  CCGGGGACGTCGTGCA GATCCTGAA TAC-CGGCG-CCCCGG  CGGTGGAACCCTTGG  65 221
NtRootA1_12690 1352561 .. 1352581 -  -6.1  -2.70932   GGTGTTCCTGAAGGA            CGCGCAACT GTT AGCTACGCA            CCGGTGACAGCCGAT  46 309
NtRootA1_12650 1346130 .. 1346145 -  -3.2  -3.71848   GCCCTCCATCAAGAA              CTGATC TCAG GATCGG               CTGACGCGCTCATTC  52 16
        purK NONE
        purE NONE
NtRootA1_12610 NONE
NtRootA1_12600 NONE
NtRootA1_12590 1339286 .. 1339315 -  -8.5  -4.11281   GATGAGAAGCAGAAA       GCAATCGACGCCG GACA CGACCTCGACCGC        GTTCTCTCCACGAAC  76 394
NtRootA1_12570 NONE
       mtcA2 NONE
        fumC 1335325 .. 1335340 -  -2.5  -3.65351   GGACCTGTACGCAAA              GTCCC TGTACG AGGAC               GGCTTACGACGACGG  51 101
NtRootA1_12510 1332569 .. 1332580 -  -5.8  -2.91582   CATGCGAGTCACAGA                GCTG GTGA CAGC                 CTATTGCGTGGTGGA  48 105
NtRootA1_12500 1331774 .. 1331828 -  -9.9  -2.87132   GCCGTCGCTTAGACA CGGCGCAAAGGGACCC-TCTCGGTCGC TGG GCGACCTCGCCGGGTCCGTT-GCGTCG CGATGCGCTCCTGTG  62 78
NtRootA1_12470 1328348 .. 1328363 -  -6.1  -3.01712   TGTCGCCTTGCAAGA              GGACG ACGCCG CGTCC               CCGGCTGGTGAGGGT  49 180
NtRootA1_12440 1324719 .. 1324729 -  -2.4  -2.63252   AGGTGGGAAGAAGAC                 CCTC GCC GGGG                 ACACGAACGCGGTGT  38 430
NtRootA1_12400 NONE
        hyuE NONE
NtRootA1_12380 1316896 .. 1316911 -  -3.2  -4.21402   ATGGAAAACCAGAAA              TGACTC CCAT GAGTCG               TGTCAGAAGTGCGTG  60 121
NtRootA1_12320 1310462 .. 1310483 -  -3.8  -3.14463   AATCCTCTGGACGAA           CCCA-AACT GGTTG AGTTGTGGG           TCACACGATTGTTAT  45 37
        greA 1309797 .. 1309829 - -19.9  -4.81083   GGCAAGCACGAAAAA      CGCCGGCCCACCC TGCAAAG GGGTGGACCGGCG      TCGGGCTTTTTCGTG 100 45
        galT NONE
        galK 1303116 .. 1303136 -  -3.9  -3.59979   TTCTGGCAGTGGAAA            CGATGACAG CCT CAGTCATGG            CCCCAGCTTACGCCC  51 77
NtRootA1_12240 1301817 .. 1301840 - -16.8  -4.26903   CCGAGTTCAGGAAAA          TGCCCCCGAA TTAC TTCGGGGGCA           TTTTTCTTTAAACGA 100 81
NtRootA1_12220 NONE
NtRootA1_12210 NONE
NtRootA1_12200 NONE
NtRootA1_12190 1296327 .. 1296366 -   -23  -4.07568   CGGGTTGCCGGAAAA  CG-ACGGAGGGCCTTGGGT TAT ACCCAAGGCCCTCCGAGCG  TGCGTGATGCGGCTT 100 41
NtRootA1_12150 1291700 .. 1291743 -  -9.7  -3.31188   GACCACAAGCACCAA CCCGCTCGGATCGATCGCGGAT TGG ATCCGCG-TCCA-CCG-GCGAG GCGACTTCAGCACCC  66 204
NtRootA1_11940 NONE
NtRootA1_11930 1269992 .. 1270029 -    -7  -2.52464   TGTTCCGCTAAGTCA  GGCGCAACCGGTTCCCTGC AGG GCCGG---CCGGCTGCGCC  AGGAAGCCGCTACGG  50 35
        sdhA NONE
NtRootA1_11910 1267271 .. 1267316 - -35.7  -3.36273   GGTGCCGAAGATTAA CGACGACGGCGCCACTCACCA ACAG TGGTGAGCGGCGCCGTCGTCG TGCTGTCCTTGAGTA 100 60
NtRootA1_11900 1266364 .. 1266377 -  -2.3  -3.57144   GCGGCCATCGGGAAA               TAGGC GAAC GCCAA                CGCGGGGTCACTTAG  47 88
NtRootA1_11880 1262362 .. 1262373 -  -3.6  -4.08767   GTCAGGGCCGTAAAA                CGGC CGGT ACCG                 GTCCCGGGTAGAGGT  60 332
NtRootA1_11870 1261029 .. 1261039 -  -4.6  -3.30124   GTTCACGCCGCACAA                 CGCC CCA GACG                 TAAGAGTTGTTTTCT  49 233
NtRootA1_11840 1259757 .. 1259779 -  -4.1  -4.28361   GCAACTGCACGAAAA          GCTCCAGACG GGTC CG-CTTGAGC           GTTTGCTTCCCTTCC  66 287
      purU_2 1248068 .. 1248115 - -11.5  -2.53015   AGATCGCCCAACTGA CTGGCAGTAGTGGTTGCTATGA GCCCT TC-GAACAACCACTATTGCCAG TCAGTTGGGACGGGA  65 42
NtRootA1_11700 1247343 .. 1247390 - -17.8  -2.52896   TTAGTTCCCAACTGA GTCGCAGCAGTGCGCGTTATGA GCGC TCAAAACGCGCACAAATGCGAC CTAGTTGGGTGAGGG  87 26
NtRootA1_11690 1246619 .. 1246631 -  -4.7  -4.07568   CTCTGCTGCCGAAAA                CCCCG GTC CGGGT                GATCTGCTGGACGAA  63 191
       alr_1 NONE
      pucR_1 1240415 .. 1240426 -  -3.6   -3.5944   ACGGAGACGGTGAAA                GCCG CACG CGAC                 GAAGTCCCTTATCTG  51 85
NtRootA1_11630 1238031 .. 1238041 -  -2.4  -3.53012   TTGTCGCTCCCCAAA                 CGGC GGA GCTG                 TCTGATGAAAAAGTA  47 99
NtRootA1_11620 NONE
NtRootA1_11610 NONE
        chvE 1233897 .. 1233928 - -27.4  -3.84451   CTGGGGAAAGCGAAA      GCCCCGGCCCGCAA ATTT TTGCGGGCCGGGGC       TGTGCTGTTAAGTAG 100 63
NtRootA1_11580 NONE
NtRootA1_11570 1229776 .. 1229788 -  -2.6  -4.56597   CGCGGTGGTGAAAAA                CCCG TGGAT CGAG                TCAAAGGTGGCGCCG  68 159
NtRootA1_11520 1224935 .. 1224946 -  -3.6  -4.72272   TCGGCTCACCAAAAA                CGGC AGTC ACCG                 AGCGTCGTTCGGGTA  75 20
      solA_2 1222671 .. 1222683 -  -3.3   -4.4078   GCTGGTCAAGGAAAA                CCACC TTC GCTGG                GACAGCTTGGGTGAA  67 518
NtRootA1_11480 1219493 .. 1219534 - -19.4  -3.52111   GCAAAAGTAGTACAA CGCAACGGCGGCCGCCCC GGGATG GGGACGGCCGCCGTCGTA  GTTAAACCGGGGCGT 100 56
NtRootA1_11460 NONE
        murQ 1215705 .. 1215715 -  -2.4  -3.01712   GCGCTCGGGCGAACA                 CCGC CAT GCGC                 TCAGGCCAACACAGC  40 49
NtRootA1_11440 1214242 .. 1214291 - -13.6  -2.75064   TTGGTCACCCAAGTA GGTCGCAGTTGTGCGCGTTTAG GGGGCT CAAAACGCGCTTAAGTGCGACC TAGTTGGGAAAGGAG  76 47
NtRootA1_11410 1212091 .. 1212108 -  -7.7  -2.78395   AACCTGGACGAAGTA             GCGTTCG ACGA CGAACAC              GCCTGAGCCTGGGCG  54 70
NtRootA1_11390 1210070 .. 1210082 -  -5.5  -4.25016   AGCATTAACAAAGAA                GGCTG GTG CAACC                TTTGGAGAGAATCCG  66 126
NtRootA1_11380 NONE
NtRootA1_11370 1208004 .. 1208031 -  -5.4  -3.21099   TCCGTCCAGGACCAA        CCACCTTCGTCG AACC CGGCAAGGGCGG         CACCACCGAGCAGGT  48 156
NtRootA1_11330 1205906 .. 1205919 -  -4.5  -3.16881   GACGCAGGTTAGGAA               GCTCG ACAT CAAGC                TTTTGGCCCCCGACG  47 177
NtRootA1_11280 NONE
NtRootA1_11270 NONE
NtRootA1_11260 1197301 .. 1197311 -  -2.4  -3.02144   GCATCGTTGTTAAGA                 CGCC CTT GGCC                 TTGCTGGAAGCCCCG  41 69
NtRootA1_11250 NONE
NtRootA1_11240 NONE
NtRootA1_11230 1196044 .. 1196080 -  -3.6  -3.59979   TGCGCCCATGCGAAA   GGCGCGTG-GAGCGACA GTAA CACCGGTCACACGGGCC    CCAACAGGAGAAGTC  51 75
NtRootA1_11220 1195225 .. 1195265 - -20.7  -3.53224   GATTGCCTCCTGAAA  TAGATGGTCTACGCACAGA CTA TCTGTGCATAGACCATCTT  GTACAGGCTACTACT 100 36
NtRootA1_11210 NONE
      marR_1 1194002 .. 1194032 - -13.4  -3.95674   AAAACTGGTAAACAA       GCCAGCAATGTTGT GGC ACTACATTGCTGAC       CGTTTGGCATCACCT  86 358
NtRootA1_11130 NONE
NtRootA1_11120 NONE
NtRootA1_11110 NONE
NtRootA1_11100 1182923 .. 1182938 -  -4.6  -3.05384   CGTCGTTTGACCCAA              CGTCCT GCGA AGGCCG               GAACATGAGCTGCCC  47 152
NtRootA1_11090 NONE
NtRootA1_11080 1180962 .. 1180985 -  -2.4  -2.91264   CCGTTCATGTAGACA          GCGTAGCGATC GTG GATCCCT-CAC          CGTGCTGCCTGGGTT  40 186
NtRootA1_11070 1180230 .. 1180249 -  -5.6  -3.53224   GAGCCGGCCGCGAAA            CTGGCCAA ACCG CTGGCCTG             CATGCGTCGCCCCTC  55 96
NtRootA1_11060 1179145 .. 1179155 -  -8.2   -3.1372   CATTTGCCAGCAATA                 GCGG GCG CCGC                 GGACAACCCCACGAT  58 258
NtRootA1_11000 1173274 .. 1173292 -  -6.7  -3.63837   ACAATCGGGGAATAA            TGCCG-GG TCAG CCACGGCA             GCCCCAGTACGCACA  61 176
NtRootA1_10980 1170889 .. 1170903 -  -5.7  -3.53091   AGCTCCGGGGTCAAA               CGGTT GCAAT AACCG               GCAAGGTTCATATTT  55 79
NtRootA1_10950 1165372 .. 1165387 -  -2.5   -4.0371   GACTGCCGAGAGAAA              CCGAC CGTGCC GTCAG               ATTACCTGGTCGTCA  56 215
NtRootA1_10930 NONE
NtRootA1_10920 1162819 .. 1162835 -  -2.1  -3.34895   CTGACCCGCAATGAA              GCTCCAG ACG CTGGCGT              CCTTGCCCTTGATCT  46 161
NtRootA1_10910 NONE
NtRootA1_10850 1153579 .. 1153606 - -12.8  -3.85698   CGGGGCTTGCACAAA        CGGGTTACGTAA ACGG TTGCGTAACCCG         GCTCACCCAGCATGG  87 223
NtRootA1_10840 1153165 .. 1153182 -  -3.3  -2.91144   TGACCGCCGAAATCA             GGATGGC GCCC GCCACAC              TCTAGGTACGGAGTG  42 27
NtRootA1_10810 1148315 .. 1148329 -  -5.6   -4.4078   CCGTCGCAACCAAAA               GTGGGC GTC GCCGAC               GTCGGGCCTTTCTCG  69 234
NtRootA1_10800 1147402 .. 1147413 -  -7.2  -3.60151   TTTCCGAAATGACAA                GCCC AGTC GGGC                 TGCGAGCGAAACGCG  60 49
NtRootA1_10790 NONE
NtRootA1_10780 1146410 .. 1146450 -  -4.7    -3.794   GGTGAATTCATGAAA  CCCCTTAGCATTGCACTCA TTG TGAGTGCATTGCTAACTTA  TGGGGTCCATTTAGG  59 222
NtRootA1_10770 NONE
NtRootA1_10760 1144543 .. 1144575 -  -2.5  -3.90112   CGGCCCGGAATGAAA      GCCCTTGGCGTCAGA CTT CCTGTTACCTAGAGC      CGAGGCAATTAGGTC  53 114
NtRootA1_10710 1140305 .. 1140329 -  -9.2  -3.34398   GCGCGCGGTCAAAGA         CGTGGACGGCG TGGA CGCCG-CCGCG          ATCGAGCTCGTCGCC  63 223
NtRootA1_10690 1139197 .. 1139213 -  -6.5  -3.38522   GACCTACTTGAAAGA              GATCGTC TTC GGCGATC              CGACCGAACCCCACC  55 283
NtRootA1_10650 1134043 .. 1134056 -  -3.8  -4.07437   AAAAGCAGGAAAGAA               GGAC CATCAT GTCC                AAGTTCGTTTTCATC  61 369
NtRootA1_10570 1128453 .. 1128463 -  -2.4  -3.28712   TCTGCCCTGTTACAA                 CGAC GAC GGCG                 TGGGAGGGGGCCGCG  45 324
NtRootA1_10530 1125267 .. 1125282 -    -6  -3.52481   AAATAGGCTACAGAA              GGGCTG AACT CGGCCC               AAACAAGGTCAGGAA  58 75
NtRootA1_10480 NONE
NtRootA1_10470 1117975 .. 1117993 -  -7.4  -3.19192   GCTGACTCAACCTAA             GCCCAC GGACGAG GTGGGC             CTGGAAGTGGGAGGA  56 257
NtRootA1_10460 NONE
NtRootA1_10450 NONE
NtRootA1_10440 1116036 .. 1116049 -  -3.8  -4.24342   CTTCCCATGAATAAA               CCCT CTCACC AGGG                TCTGACATTATTAGC  62 80
NtRootA1_10430 NONE
NtRootA1_10360 1105303 .. 1105341 - -23.2  -3.11072   GGGAGGCAATACATA   GCGACGACGACGGCGGGA AGC TCCCGCCGTCGTCGTGGT   TTAACGTGCCTAGGC 100 35
NtRootA1_10330 NONE
      rbsK_1 1100599 .. 1100609 -  -2.4  -4.08216   TGAGTCGCTGGAAAA                 CCGC TCT GCCG                 ATGACGAGGTACGGA  57 359
NtRootA1_10280 NONE
NtRootA1_10270 1096892 .. 1096950 - -15.2  -3.92373   CACCCGAGCCACAAA TCCCGGTCTTGTTCGCTAAACCCCACCT ACA AGGTTGCGATCTGCGTACAAGGCCGGGA TTTGCTGCGACGGAC 100 43
NtRootA1_10250 1094024 .. 1094039 -  -5.4  -3.27498   CACATGGCACACTAA              GTTGCCG ATC CGGC-AC              GTACATCCAGCCGCC  51 56
NtRootA1_10230 1090876 .. 1090922 - -19.5   -2.9162   CAACTGCTTAAAGGA GCGACGGCGGCACGCAC GTTTCGAGCGATG GAGCGTGCCGCCGTCGC CGGCTGCGGAGTAGC 100 66
NtRootA1_10210 1088164 .. 1088178 -  -5.6  -3.53224   TACTCGGTTGCCAAA               GCCGGT GTC ATCGGC               CTGACCCGTGCCACA  55 108
NtRootA1_10200 1087616 .. 1087629 -  -3.8  -4.18018   CGTCGCCATGCAAAA               GCTC ATTGAA GAGC                TTGGCCCGGCACCCA  62 41
NtRootA1_10100 1077901 .. 1077918 -  -7.7  -3.28712   TTCTCGTTGGCAGAA             TCCCTCG GATC CAAGGGA              ATCCGGGTCAATGCG  58 289
        bioB NONE
NtRootA1_10060 1073803 .. 1073815 -  -4.7  -2.55544   CGATCAGCGAACTCA                TCGGG ACA CCCGT                CCGTGGCGCGAGCAC  43 10
        bioA NONE
        bioF NONE
        bioD NONE
NtRootA1_10020 NONE
NtRootA1_10010 1068719 .. 1068731 -  -4.7  -2.86619   AGGAAATGGAATAAT                CGCCG AAC CGGGG                GAGCAAGGCGTGGGT  46 187
NtRootA1_10000 NONE
NtRootA1_09990 1067382 .. 1067399 -  -4.1  -3.19463   GGTATGACGCAGGAA             CGCCT GTTGGAGG AGGCG              CGTTGTGCGAAAGTG  47 117
NtRootA1_09980 NONE
NtRootA1_09970 1064610 .. 1064629 -  -5.7  -3.40403   TCTGGTCGAGGAGAA            CGGTGCT CATGCC AGCACCA             CTGCGTTCAAGTCGA  53 12
NtRootA1_09960 NONE
NtRootA1_09950 NONE
NtRootA1_09940 1061586 .. 1061598 -  -3.3  -2.65774   CAGATCCATCACAAG                CTCCT TAC AGGGG                TCGTGTCATTTTCGA  40 6
NtRootA1_09930 1060757 .. 1060775 -    -3  -3.55622   GTGAAGGGGGCTAAA             GGCTGC GGATCAG GCCGCC             GTCGCACCTCAGCGC  49 2
NtRootA1_09920 1059251 .. 1059262 -  -2.2   -2.8372   CATGGCGCACTAAAT                GCCT GTGT AGAC                 GGTCTTGCCCCAGGT  39 8
NtRootA1_09910 NONE
NtRootA1_09900 1057888 .. 1057903 -  -8.2  -3.95324   GAGCGCGAAGAATAA              GCGCCA GTTG CGGCGC               TTCAGGTAGGCGTTC  71 62
NtRootA1_09850 1053484 .. 1053505 -  -8.7  -3.39018   GGAGCATCGGAAAGA           CCCCCGACT CCAG AATCAGGGG            AAAGAAGGCGGTGTG  60 138
NtRootA1_09780 1043614 .. 1043634 -  -3.1  -3.21218   ATCCGCCACGACCAA            CCGGCCCAG GCG CTGGAACTG            CTGGAGTCGGCGCCT  44 294
NtRootA1_09700 1032501 .. 1032513 -  -3.4  -2.87931   GTCATCGTTGACAGA                CCTT TCGTC AAGG                GCTTGCGTTTCAGGA  42 128
NtRootA1_09690 1029828 .. 1029847 -  -4.2  -3.57792   TTACTGACCGGGAAA            CGGTC-CGC ATG GCGCGAGCG            GAGATCAACGCGCTG  53 80
NtRootA1_09600 1016672 .. 1016691 -  -5.6  -3.34192   AAGGTCGGGAAGCAA            CGCGGGAT AGTC AGCCCACG             TGGACCCATGGGCGG  53 16
NtRootA1_09590 1015126 .. 1015143 -  -9.1  -3.53012   TTGCCGCTCCGGAAA             CGCACCT GACC AGGCGCG              ACGACGGCCCCCGGA  65 442
NtRootA1_09570 1013016 .. 1013060 - -20.7   -3.6502   GACTCGGGACGGAAA GCGCAACGGCGACGCCGCC GGAAAGG GGCGGCGCCGCCGTCGAAC ATTACCCGGGGCTGG 100 48
NtRootA1_09560 1012354 .. 1012375 -  -6.5  -3.72576   CCTGGGTGGAGGAAA           TCGACGTCC CTGA AGACGACGA            GCGGGTTGTCCCCCT  62 99
NtRootA1_09540 1010812 .. 1010822 -  -5.4  -3.24747   CGCCTAGACGATCAA                 CGTT CCG AACG                 CGAGGCCAAGCCCAT  51 3
NtRootA1_09530 1009795 .. 1009805 -  -8.2  -2.94099   TTCCGTCAGGATAGA                 GCCC ATG GGGC                 CGCGAGTCCATGGCG  56 63
NtRootA1_09520 1008680 .. 1008738 -  -6.4  -3.08073   ACCATTGGGAACACA CCTACCCGGCATGGGCGATGCTGCGGAG CCT CGCGGCAGGGAGGCCCATGGCAGACAGG ATCTTCCTGGTGGAC  51 98
NtRootA1_09500 1006699 .. 1006717 -  -8.8  -2.64472   CAGCCGGCAAACTTA             CGACGCCC ACG GGACGTCA             TTCGAATGGAGTTAT  57 86
NtRootA1_09490 1003515 .. 1003555 - -18.3  -3.72576   CCTTGTTTCAGGAAA  GCCACGACGCCGGCACC TGACTTG GGTGCCGACGTCGGGAC  CTACCGCGCGCGGGA 100 220
NtRootA1_09450  998826 ..  998842 - -10.1  -3.53091   ATGCTGCGCCGGAAA              GTGCCAC GAA GCGGCAC              TAGGTTTGTTCGGCG  71 137
NtRootA1_09410 NONE
NtRootA1_09400  993780 ..  993814 - -20.2  -3.36452   AGCGCTCAACACCAA     GAATGCCCCTGTGACC GAG AATCACAGGGGCATTC     TGTCATCGATGCGTC 100 39
NtRootA1_09260 NONE
NtRootA1_t00160 NONE
NtRootA1_09230 NONE
NtRootA1_09220  974656 ..  974703 - -33.2  -3.35813   CCGGAGCCCAACTAA GTCGCATTTGTGCGCGTTTTGA GGGC TCAAAACGCGCACAAATGCGAC CTACTTGGGTGACCT 100 42
NtRootA1_09190 NONE
NtRootA1_09180  969204 ..  969246 - -15.5  -4.56775   AGGTGTGGTTAAAAA GGCTGAGTGGGGGCGGTCC CCAAC AGCCCGCCACCACTCATCC CCCCAATTGTGATCA 100 148
NtRootA1_09170 NONE
NtRootA1_09160 NONE
        tcyC  966810 ..  966820 -  -3.2  -2.79501   GACAGCGCTAGGAGA                 CCTG CGC CAAG                 AGGTTTAGACGTCGT  41 30
        serC  951789 ..  951833 - -16.4  -3.14132   CGCCTGGGCGATTAA CGGCAGCGGCGCCGT-CCGGT AAGA ACCGGGACGGCGCCGTTTCCT GCCCTTGCGTGGAAT  88 65
NtRootA1_09010  950166 ..  950176 -  -2.4  -3.64703   CGTGGCCCAGGTAAA                 GCCG GCC CGGT                 TGATTCGTTATTGAC  51 54
NtRootA1_09000 NONE
NtRootA1_08990  945966 ..  945979 -  -2.3  -3.52522   GGAGATAAATAGCAA               TGGCC TAAC GGCTA                TTCGTCTGTGGCAGC  47 23
NtRootA1_08980  945288 ..  945306 - -11.8  -3.04263   AGTCGACGGCCAATA             GCTGTGAA ATA TTCACAGC             TGCCGCTGATCACGC  73 35
NtRootA1_08970  942957 ..  942978 -  -7.2  -2.99471   GTACCTGGATACAGA           CTCGGGCC ACATCA GGCGCGAG            GAATTTCCGGACCTG  54 194
NtRootA1_08940  941047 ..  941065 -  -4.4  -3.32844   TGCTTGATGTGAGAA             GGCTGGCG CGC CGCTAGGC             TCCCAGTGCGAGTCC  51 20
NtRootA1_08930  940280 ..  940298 -  -4.4  -3.14564   CCAGCGTTGCAGCAA             CGTCAGCG CTT CTCTGCCG             TTCGCAGCACGTAGC  47 9
NtRootA1_08920  938765 ..  938783 -  -5.9  -3.31144   TCGCTATGTGGATAA             CGGCTCT GTTGA AGGGCCG             CTAGAGGTAACGCCG  51 76
NtRootA1_08910  938208 ..  938218 -  -3.2   -3.5774   AGGGAACCCCCGAAA                 GCTG ACC CAAC                 TGGAGGCACAGGAGG  49 165
       ung_1  932760 ..  932772 -  -2.6  -3.25192   TCGAAGGTTACAAGA                CGGG TAGTT CCCA                ATTGACGGGCTCTGC  44 5
NtRootA1_08840  931800 ..  931827 - -12.6  -3.14132   GGGTCTGTCCAGCAA        CGAGCGCCGCAG GGTA CGGCGGCGCTAG         ATCACTTCTGGCCGC  76 58
NtRootA1_08700  913044 ..  913062 -  -2.4  -3.73224   CGACCCTTGATGAAA             TCAAGG AAAAGCA CCCTGA             ATTGTGGGGTACGGT  52 170
        hipO  911116 ..  911169 - -19.8  -3.28712   TCGGTCTGGGCAGAA CCCCGTTTTA-AGGCAATTCACCGC GCGCG GCGGTGAATTGCCCGTTAAGCGGGG TTTCCTGCTGTCTGC 100 16
NtRootA1_08650 NONE
NtRootA1_08640  907937 ..  907948 -  -5.8  -2.88544   GCTCATGCGGACACA                GCCT GGTA AGGC                 GTGGCTTCTGCTGCG  48 1
NtRootA1_08630  906894 ..  906911 -  -2.6  -3.72576   GTCTGGCTCATGAAA             GGCCCT TTCTAG ATGGCC              GTAGGCTGCTGCTGC  51 16
NtRootA1_08620  905293 ..  905304 -  -7.2  -2.99649   ACAGCTTGATATATA                CCGG ATTT CCGG                 CGAACTGACCGCTTT  53 63
NtRootA1_08480  892574 ..  892585 -  -7.2  -3.05384   GGCGTCGCGACGGAA                CGCG CCAT CGCG                 TCCAATCCTGGGATC  54 363
NtRootA1_08470  891302 ..  891319 -  -4.8  -4.10007   AGAAGTCGGGCAAAA             CGCCCA TCGAGT TGGACG              ATGCGCAGGTTACGT  63 342
NtRootA1_08450  890622 ..  890657 -  -2.4  -3.41878   TGGCCCAACCGAGAA    GGA-GCTCTCCGGGCTG ACT CTTCCCGAAGTACGTCC    GGCGCCATCAACCGA  47 65
       gpm_2 NONE
        nnrD  887308 ..  887318 -  -6.8  -3.70947   CACAACACAAAGGAA                 GAGC GCG GCTC                 AGATGAACAGCGGGC  62 216
NtRootA1_08400  884166 ..  884181 -  -4.6  -3.55622   TCGAAGCTGTCGAAA              GTGCCC TTTT GGTCAC               CCCTCGTGACCGTGA  53 237
NtRootA1_08390  883191 ..  883201 -  -5.4  -3.60798   ATCTCCACAAACGAA                 TGCT TGA AGCA                 GCCCCGCACCGACCG  55 327
NtRootA1_08370  880590 ..  880626 - -15.2  -3.14211   AGGGGGCTCCACCAA    CCCCTCCATTCCGG CGATTTTGC CCGGATTGGAGGGG    CTTTTGTTTCCGGGA  85 43
NtRootA1_08350 NONE
      otsB_1  876779 ..  876798 -  -3.6  -4.26076   GTAGCGTTATCAAAA            GTAACTGT AGCC ACAGTTAT             CAATCCCTTCACCGG  65 249
NtRootA1_08330  875636 ..  875689 - -13.8  -2.57132   TTCTTTCTGCAGAAT GGTTAACGCGAGAGCGGCCCGACCC GGGAA GGGTCGGGCCGCTGTCACGATG-CG GATTCAGGTGCCGGT  74 46
NtRootA1_08320 NONE
NtRootA1_08310  872506 ..  872523 -  -5.5   -3.5764   AACGCCATCCTGAAA             GGCC-GGC CGG ACCTGGCC             TACTCGCTGGCGTAC  57 105
NtRootA1_08280 NONE
NtRootA1_08270  867365 ..  867413 - -12.1  -2.84999   ATGAAAGTCATCATA GTGGTGGTTGCGGGCCGCCCGCT GGG AGCAGGCGGCCCGCTTCTCCTTC TGGACTATGCCGATG  70 57
NtRootA1_08260 NONE
NtRootA1_08250 NONE
NtRootA1_08240 NONE
NtRootA1_08230  862596 ..  862621 -  -5.3  -3.50853   TCCGGTGAATTACAA         GGTGGACCACG GGAC CATGGTCTTCC          GTACCGGCGAGGGCA  53 417
NtRootA1_08150 NONE
NtRootA1_08140  849817 ..  849838 -  -3.5  -3.53012   CGGCGCGGCGGCAAA           CGGACCCGC AATG GCAGGAACG            GACTGCGGCTATGGC  49 441
NtRootA1_08110  847962 ..  847992 -   -19   -4.2772   TCTAACCAACACAAA       GCGAGCCCCGACCA CCA CAGCCGGGGCTCGC       CCCATTTAACGCGCA 100 42
NtRootA1_08070  831345 ..  831369 -  -5.5  -3.05596   CAGCGGCCTACCGAA          CCGACCGCTCC TTC GGCGTGGTCTG          CGAAATCCTCCAAGA  49 227
NtRootA1_08030  827114 ..  827128 -  -9.2  -3.16742   CGTAATCCTCAGTAA               GGCGCC GCA AGCGCC               ATCCTCCGTGTGCTG  64 334
NtRootA1_07960  821384 ..  821427 - -22.6  -3.47227   CTTCAATCAGCACAA CGACGAAGGAAGGGTTCCGC CGCA GCGGAACCCTTCCTTTGTTG TCTTACTTGAAGCGT 100 46
NtRootA1_07930  818476 ..  818510 - -31.6  -2.71364   GTAGTGTGTTAACGA     CGGCGGCCGGTCACCT CTC AGGTGACCGGCCGCCG     TCGTTGGTTATGCGG 100 48
NtRootA1_07910  816184 ..  816194 -  -2.4  -3.05596   GAGTCGCTGATCGAA                 CGTC GAC GCCG                 GCACACGGCTGAACC  41 518
NtRootA1_07880 NONE
NtRootA1_07870  813175 ..  813197 -    -7   -2.8805   AGCAGGCTGGACAGA          CCGGT-CCC TTATAG GGGTACCGG           CGGGCCGGCGAGGTG  50 59
NtRootA1_07850  811559 ..  811576 -  -6.9  -3.40371   GATTCCATCAAGCAA             CTCCCGC TCCT GCTGGAG              AAACACGAATCCAGG  57 61
NtRootA1_t00140  810536 ..  810576 - -22.1  -4.87665   CTTCAGTCAGAAAAA  CTGAGAACCCCTGGAAATC CTT GATTTCCAGGGGTTCTCTA  CCGAGCTTCCTATCA 100 27
      trxB_1 NONE
NtRootA1_07810  808491 ..  808549 -  -6.8  -2.93858   CACCACACCCACACA GGCCGCGAAGCGCCTGACTGCGCACTGTC CCAT GACAGTGCGCAGTGATG-GCCCCG-GGG- TTCAGTTGCGGACCA  53 27
NtRootA1_07790 NONE
NtRootA1_07780  805952 ..  805972 -  -6.7  -3.53012   GCGGGTTTTTGTAAA            CCCGGCCCC GCT GAGACTGGG            GCTCTCCTTGGTGCC  58 155
NtRootA1_07770 NONE
NtRootA1_07760  804611 ..  804642 -  -7.4  -4.20516   CTGGGATGCAACAAA      GAACCGCTGGAAACC CGT GATTTACAG-GGTTC      ACTTACGAGCTTCCC  71 222
NtRootA1_t00130  797911 ..  797936 - -16.2  -4.74103   GTGTTAAGCCAAAAA         TGCCCCGGGT TCGTAG ACCCGGGGCA          TTTGCTGGCGGAAGG 100 31
NtRootA1_07680 NONE
NtRootA1_07670  792108 ..  792155 - -28.7  -3.56568   GAAGTAGCTGCCAAA CCCCAGGGGGGCACCTCACGAT TCATC ACCGTGAGGTGCC-CCCTGGGG CAGCCTAAGGAAAGG 100 47
NtRootA1_07640  788230 ..  788266 -  -2.9  -3.15544   TGTCATTGTCAGGAA   GGGGCGTCTGATCAGC TTCTGT GGTGGTCAT-CGCCCC    ATCCAAGCAACACTT  43 67
NtRootA1_07630  785957 ..  785970 -  -8.1  -3.05384   CTCGCTGCCAGCCAA               GCCGT TCGC ACGGC                CTTGCGTGCAGCGGG  57 57
NtRootA1_t00120  785733 ..  785771 - -16.9  -3.72576   CGGCTTGGGATTAAA  CGCAAA-AGGTCCCGGTT CGAA AACCGGGACCCATTCGCG   GAGACGGGGGGATTT 100 23
      manB_2 NONE
NtRootA1_07590 NONE
NtRootA1_07580  779419 ..  779431 -  -4.8  -3.63589   GAAAAGATGTGCAAA                TCGC TGAAC GCGA                TTGCGGCCGCATGCC  53 42
NtRootA1_07570  778052 ..  778099 - -35.2  -3.17075   GCGTTCTTAAGTGAA CGACGACGGCCCGTCACTTTTC GCTG GAAAAGTGACGGGCCGCCGTCG TGCTTGTTGCTTTTG 100 59
NtRootA1_t00110  775799 ..  775826 - -22.8  -5.08255   AGCGGGAAAACAAAA        GACCCGCACCGG CGAA CCGGTGCGGGTC         TTCATCTGTGCGCCC 100 33
NtRootA1_07540 NONE
NtRootA1_07530 NONE
NtRootA1_07520 NONE
NtRootA1_07510 NONE
NtRootA1_07500 NONE
NtRootA1_07490  767038 ..  767048 -  -2.4  -2.90496   CTCTCTTCTAAAGGA                 CGAG TTT CGCG                 GCACCAACAATGGCT  40 7
        nanE  766243 ..  766273 -  -2.7  -3.33492   GCATTCATGGGAGAA      GCCT-ACAACTGC TACCTCT GC-GTTGTGAGGC      CCGCTCTGCGAGGTT  46 83
NtRootA1_07470  764743 ..  764776 -  -7.5  -3.53012   TGGTGTCTGCTGAAA     GTCTAACTGAACTGA CTGG TCAGTTCAAATAGGC      CCTAGAGCCCATACT  60 27
NtRootA1_07460 NONE
        yhgE NONE
NtRootA1_07440  761210 ..  761223 -  -3.1  -3.01712   CTTTGCGCGTTAAGA               GCGACT CAT AG-CGC               GTCAAGCGGGCCTCA  42 57
NtRootA1_07430  760407 ..  760419 -  -5.5  -3.71148   GAAAACGCACGGAAA                CTCCC GTT GAGAG                GCCTGCTCTGCGCCT  58 97
NtRootA1_07410  758474 ..  758523 - -22.5  -2.53995   ACCTAGCCCAACTGA CTGGCAATAGGGGTTGTTTCGAA GGGG CTCAAAACAACCCCTATTGCGAG CTACTTGGGTTCAGG 100 26
NtRootA1_07350  752169 ..  752185 -  -6.5  -3.21099   GTCCCGGACCACGAA              CGTCCCC TCG AGGAACG              CGGACACCGTGAGGC  53 486
NtRootA1_07320 NONE
NtRootA1_07310 NONE
NtRootA1_07300  746989 ..  747047 - -23.2  -3.13919   GTTAAACGCGAAAAC CGCCCCG-GTCCCGCCGTTGGCTGCAG TAATCC CTGCTGCGAACGGCGGAAAACGGGGCG GCAATCATGCCCTGA 100 88
NtRootA1_07290  745850 ..  745865 -  -3.2  -3.72893   CAGGCTTGCAGGAAA              CGCC CGCGCGTT GGCG               GAGGGCCTCGCCGGT  54 300
        tadA  742315 ..  742330 -  -7.6  -2.87132   GCTCCTTTGCATAGA              GCTCAT GCGG ATGAGC               GGTGCTCCGCTGCCG  56 12
NtRootA1_07230  741682 ..  741700 - -10.2  -2.72461   CAACGGTCCTGAAAG             CCCTCGGC AGC GGCGAGGG             TGCAGAATAGGGCCG  63 239
NtRootA1_t00100  739017 ..  739053 - -15.9  -4.54727   CCGGGCAAAGCAAAA    GGCCCCGCCTCCCTC ATAAACA AAGGGAAGCAGGGCC    TTTCTCATTGGCGGT 100 34
NtRootA1_07170 NONE
NtRootA1_07160 NONE
NtRootA1_07150 NONE
NtRootA1_07140  733916 ..  733957 - -14.6  -3.91911   GCCACGGCAAGGAAA GCGGATTGGCGTCCGGA TCGTGATAT TCCGGACGCCAA-CCAC CGTGTTACTTGGCGT 100 30
NtRootA1_07120  733213 ..  733227 -  -4.2  -3.92996   GCTCAGACAGAATAA               GCCC GAGCCGT GGGC               TGATGGTTAGACAGC  57 32
NtRootA1_07110 NONE
         nei  727373 ..  727408 - -13.2  -3.13164   CCCGGAACCAGCCAA    GGCTCCGGCCCCCACCG AAG CTGTGGAGGCCGC-GCC    GGCCGCCTGATGGTT  76 65
NtRootA1_07080  725006 ..  725023 -  -6.3  -3.57792   TCAGTTACTGGGAAA             GCC-CAGA GCA TCTGAGGC             GCTTCGCAGCGGACC  59 276
NtRootA1_07060  724056 ..  724103 - -30.2  -2.52464   TTCCCGCCCAACTGA CTGGCAGTAGTGGTTGTTCCCA GAGC TGGGAACAACCGCTACTGCCAG TCACTTTGCGTTTAC 100 37
NtRootA1_07030 NONE
NtRootA1_07020  720463 ..  720488 -  -5.9  -3.72576   GTTCGTCGCACCAAA         GTGCCGGACGG GCTG CCGGTCGGCGC          CGCCGTCGTGACTCC  60 398
NtRootA1_07000  719493 ..  719536 -  -4.4  -3.29144   TTACTCGGGTGAGAA CGACGAAGCC-CGGACCTCGG CTG CCATGATGCGCGACGCCGTCG AACGCGTTGCGCTGA  48 101
NtRootA1_06920  711663 ..  711682 -    -5  -4.00934   AGGGGAAATATGAAA            GCAACG TTGTTGGC CGTTGC             AGGCTTGCTGGGCGC  62 156
NtRootA1_06900  708576 ..  708605 -  -3.5  -3.14211   ATGGTCCGCCACGAA       GTCGGTCAAGGTGA AGA CCAC-TTGTCCGGC       ATCGTTGGCTGCCGC  44 444
NtRootA1_06870  706305 ..  706323 -  -3.1   -4.4767   TCACCGACTACAAAA             TCGCCAA GATTT TTGCCGA             CGCCGAGGCCATCTT  67 126
NtRootA1_06840  702972 ..  702994 -  -6.3  -4.37092   AGCCCGCTGAGAAAA           GCGTAGGTT AGGCA AACCTATGC           TTCCAAAGCTACGAG  72 101
NtRootA1_06830  701828 ..  701838 -  -6.8  -2.88822   GTGGTCACAGAATTA                 CAGG AGT CCTG                 CCTTGGTCATCAGAT  53 12
        sfuB NONE
        fbpC  698641 ..  698652 -  -2.2  -3.57144   GCCGCGACGCCGAAA                GCTA CTTC CAGC                 GCATGACGCCACGGG  49 429
NtRootA1_06790 NONE
NtRootA1_06780  696932 ..  696955 -  -4.4  -3.89346   CGTCCAGTCTACAAA          CTCCGGCCGCC GAG GGAGGTCGG-G          ACCCGCTAGAGGACG  59 68
NtRootA1_06770 NONE
NtRootA1_06760  695059 ..  695098 - -12.3  -3.75169   GACGAGGGCAGGAAA GCGG--AAGCTGGCACGCT ACCA AGTGTGCCAGCTTTACCGC  GGGTAACCTGCGGAG  81 46
         tgt  693493 ..  693509 -  -2.9  -4.09864   ACGCACCGGTGAAAA              GACGC TTTGGGC GCGCC              TTATGGGTTCCTCCG  58 257
        kgtP  690194 ..  690215 -  -5.1  -3.29461   GAACGGGCCTCACAA           GCCAGC-CGT TCT AGGCGCTGGC           ACAGCAGGTTTTAGG  49 36
NtRootA1_06710 NONE
NtRootA1_06700 NONE
NtRootA1_06690 NONE
NtRootA1_06680  685775 ..  685787 -  -5.5  -3.61089   CTGGAACAACTACAA                CAGCC TGC AGCTG                CTGACCTACTTTGTC  57 399
NtRootA1_06660  684199 ..  684215 -  -9.3  -3.36749   GATGTGCAAGAGGAA              CCGCCGG AAC CCGCCGG              GATGTGAGAGAGGAA  67 108
NtRootA1_06630  679596 ..  679653 - -12.5  -3.04715   CAGCCTGCGTAAAAG GGGCCCTGCGTCCCGGT-CCGTCCTCGC TCA GCGAGGTCGAAACCGGGACGTGGGGAAT AGCAGGCAGAGCATT  76 82
        aceB  677752 ..  677764 -  -4.7  -3.91897   GGTGGCATGGAGAAA                CCCCG CTG CTGGG                CTGCCTCCCCGACCA  59 111
NtRootA1_06590 NONE
NtRootA1_06580 NONE
NtRootA1_06570  671602 ..  671615 -  -3.8  -3.71645   AATGGGACATGGAAA               CTCC TTTGCC GGAG                CGGGGACACCACTTT  54 70
NtRootA1_06560 NONE
NtRootA1_06550  669759 ..  669774 -  -2.5  -3.10112   AGTGAACCTACTTAA              CTGCC CCGGAT GACAG               ACCTGCCACCAAGTG  41 2
NtRootA1_06540 NONE
NtRootA1_06530 NONE
NtRootA1_06520 NONE
NtRootA1_06510 NONE
NtRootA1_06500 NONE
NtRootA1_06490 NONE
NtRootA1_06480  662914 ..  662936 -  -7.6  -3.38272   GATCAGCACGCAGAA           GGGGGCGTTG AGT CAACGCAACC           CACAGCCGGAGGCGT  58 189
NtRootA1_06440 NONE
NtRootA1_06430  658548 ..  658566 -  -7.4  -2.79501   CAGACGTCCATCAGA             GGATTCCT TCC AGGAGTCC             GGCGGGTAGTGCAAT  51 2
NtRootA1_06420 NONE
NtRootA1_06410  656488 ..  656514 - -11.7  -3.12351   TTTGTGGACAGCTAA         TGCCCCTAAGA ACGAA TCTTAAGGGCA         TTGGCTGGACACGGA  73 55
NtRootA1_06400  655781 ..  655795 -  -2.7   -4.4009   GTTCAGGGCAGAAAA               CGTCC TGCTG GGGCG               CTCGCGGATCACGAT  65 156
NtRootA1_06370  651648 ..  651703 -   -22  -3.05596   TAGCGCCGCACCCAA CTGAGTCGCACTTGAGCGCGTTTTGA GCTC TCATAACGCGCACTACTGCGACTCAG TTGGGTTCGCGTACG 100 56
NtRootA1_06310  644941 ..  644953 -  -9.1  -2.52464   CCGTCGGGTAAGGGA                TCCCG CAA CGGGA                CGGCAGCGCTAAACC  57 69
NtRootA1_06290  643225 ..  643244 - -10.8  -3.31461   TATCGATTGGTACAA            GCTGTACT AAAC AGTACAGC             TTTTGGGTAATGGGC  68 101
NtRootA1_06280  642721 ..  642738 -  -3.3  -2.78384   GTGCGTGGCATTACA             GTCCGAG TTCG CTCAGGC              CGGGGTGATCCGCGG  41 3
NtRootA1_06270  642069 ..  642080 -  -4.4  -3.17212   CGACCACGGTATCAA                CGAA GCAG TTCG                 CGCCCATTAGCCGAT  47 95
NtRootA1_06260  641095 ..  641105 -  -2.4  -3.92542   TTCATTTGCAAAGAA                 CGCC CGA GGAG                 AAACGTTTGGTTCGG  53 373
NtRootA1_06250  639110 ..  639155 - -22.9  -3.53012   GTTTGTTGGTCTAAA TGAACGTAGGCGTGTCTACAGC TGT GCTGTAGACACGCCTAC-CCCA ATCAGGGCAAGAATG 100 83
NtRootA1_06240  637912 ..  637926 -  -4.2  -3.93556   ACGTACCGAACGAAA               CCGTGA ACA TCAAGG               TCTTCAATGCCACCT  58 469
NtRootA1_06210  636079 ..  636091 - -10.5  -2.72344   GGTCACCGTTAAGCA                GGGCG TAC CGCCC                GCGGTGACGGACGAC  63 202
      cpsY_1  634534 ..  634546 -  -4.7  -3.05384   CGCCGCCTCACCGAA                GCCGG CAT CCGGA                TTCCGAGCCGTTCGC  47 110
NtRootA1_06150  629218 ..  629274 - -18.8    -4.128   ACCTGTACAGAGAAA TTTGTGCACGGCTCCTGCCCTCATGA AGCTG TCGAAAGGACAGGAGCCGCGCACAAT CTAGGAGCGGATGCG 100 26
NtRootA1_06140  628221 ..  628250 - -18.7  -4.56597   GGCTGTCTTTAAAAA       GAGAAGCCCGCAC CTGT GTGCGAGCTTCTC        TCGCGGGGTGATCTC 100 39
NtRootA1_06120  623342 ..  623362 -  -3.9  -3.66844   GTGATACCGCAAGAA            TGGGCGC GTTGGGG GCGTCCA            TTTTTCCGTTAAGGC  54 268
NtRootA1_06100 NONE
NtRootA1_06090  621868 ..  621879 -  -4.4  -3.81339   CAGTCACAAGTGAAA                CCTA CCTA TAGG                 GACTGACATTTTAAA  59 234
NtRootA1_06080 NONE
        recR NONE
NtRootA1_06050  615363 ..  615389 - -19.5  -3.65046   CCGCCACGCGAAGAA         GGCTCCGTCCC AAGTG GGGACGGAGCC         TTCTCAGAAGAGCCG 100 143
NtRootA1_06000  610218 ..  610230 -  -4.1  -3.57792   TCACTGACCGCTAAA                GTGAA GAT CTCAC                AAACCGTCGTAGAGA  51 174
NtRootA1_05980  606696 ..  606735 - -15.7  -4.07568   CGCTTGTGGCGAAAA  CCACGTGCGTGGCGGCCC AAAAA AGGCCGCCACGC-CGCGC  CAATTGCCCTCTATT 100 42
NtRootA1_05970  606189 ..  606244 - -28.6  -3.30159   GGAACCGGGCGACAA GTAGTTAATTGCGGAAGGACCGGAGC ACGT GCTCCGGTCCTTCCGCAATTAATCCC GACGGCGGCACTCCC 100 76
NtRootA1_05920  603853 ..  603872 -  -4.9  -3.61398   CGCCGTTTCCAAGAA            CGGGGTC GCTGCG GACTCCG             CTATCAGCTTCACAG  55 500
NtRootA1_05900 NONE
NtRootA1_05890 NONE
NtRootA1_05880 NONE
NtRootA1_05870  600887 ..  600902 -  -4.6  -3.17688   CAACCAGCCCACCAA              GGCAAC AGTT GATGCC               GCAGTCCTGGGGGCC  48 372
NtRootA1_05840  593570 ..  593625 - -20.6  -3.06183   CGCACGTTCACCCAA CTAGGTAGCAGCTGAGCGCGTTTAGA CGGC TCTAAACGCGCTCTAATGCGACCCAG TTGGGATCAGCGGTC 100 32
        purS  592397 ..  592409 -  -2.6  -2.63715   ATCGATGTCATATCA                GGCC TCGAC GACC                TCGACGTTGACAACA  38 10
        purQ NONE
        purL  588991 ..  589002 -  -3.6  -4.08767   GTCAGGGCCGTAAAA                CGGC CGGT ACCG                 GTCCCGGGTAGAGGT  60 336
NtRootA1_05780  587677 ..  587690 -  -8.1  -3.19522   CGATCCAACAGGTAA               TCCGC TCCT GCGGA                CTGCAGGGAATCTGG  58 211
NtRootA1_05730  583526 ..  583538 -  -4.7  -3.21695   GCAGCACGAAGCTAA                GGAGG ACC CCGCC                CGGTTCATTGAGTTG  48 312
NtRootA1_05710 NONE
NtRootA1_05700  580721 ..  580734 -  -3.7   -3.5936   GCCAAACTGGTCAAA               CGGCG AGGG CGTCG                TAGGCCGCGAGCCGA  51 7
NtRootA1_05690 NONE
NtRootA1_05680 NONE
NtRootA1_05670 NONE
NtRootA1_05660  577520 ..  577576 - -29.8  -3.53989   AAGACATAGAAGCAA CGCGGGGTCACTTACGGCCCAT CCCAAGGGGATTT ATGGGCCGTAAGTGACCCCGCG TTGCTTTAAGAGGGG 100 42
NtRootA1_05650  576866 ..  576880 -  -5.6  -3.18264   TTCCTGATTTACGAA               GCCGTT GTG ACCGGC               CACTCTGGCTCGGCC  51 215
NtRootA1_05620  574875 ..  574913 -  -2.9  -3.65425   GCGACAGAGTCCAAA  GTCCCCGCCCACCTCACG GATT CACAGGGGTGGCGGGG-C   TTTGCGATGAGGGAC  52 66
NtRootA1_05610 NONE
NtRootA1_05600  573677 ..  573730 -  -6.9   -3.3164   AATCGAGTGTGAGAA GTTC-CCGACC-ACCC---CGGCAGGGA TTT TCCCTGCCGCCAGGGTAGGCCGGAGTAC AGATGGCGATAAGGG  56 387
NtRootA1_05530  567150 ..  567164 -  -5.6  -2.76453   CGACAAGCTGAAGCA               GCGGCT GAA AGGCGC               GGGACGCTAAGCTAG  47 515
NtRootA1_05490 NONE
NtRootA1_05480 NONE
NtRootA1_05470 NONE
NtRootA1_05460  560581 ..  560616 - -22.7  -3.28745   TGCGGAAGAAGTCAA    CCAGCGGCCGGGCAGG CCTGT CCTGCCCGGCCG-TGG    AGGGTTAGGAGTTGC 100 30
NtRootA1_05450  558690 ..  558741 - -19.4  -3.60627   CTAGCGGAGCGGAAA CGGCGACGACGGCGACCTTCACCT TGGT AGGTGACGGCCGCCGTCGTACTCG TTAATCCAAAACCAG 100 329
NtRootA1_05430  557176 ..  557226 - -14.7  -2.76815   AGCCGCCTTAACAAG GGCCAACGGCCCCGATACGC-CGT CTGC ATGAGCGTTTCGGGGCCGTTGGAG TTTGTTGGGGAAATA  80 121
NtRootA1_05370 NONE
NtRootA1_05360 NONE
NtRootA1_05350  549992 ..  550040 - -14.4  -3.33483   CAGTTAAACCAGGAA TCACGACGGCGGTGGCCAGCCC TGCGG GGGGTGGCTGCCGACGTCGTGG TTTCCGAAGGGAAAC  87 56
NtRootA1_05280 NONE
NtRootA1_05270 NONE
NtRootA1_05260  541476 ..  541488 -  -4.7  -3.17075   CCGTTTGGAACGGAA                GGTGC GCT GCGCC                TGTCAGGCTTTGGCC  47 28
NtRootA1_05250  540322 ..  540333 -  -4.4  -4.08767   GCCACGGTTCCAAAA                GAAC CTTG GTTC                 TTCGAAACCGAAAGG  62 105
NtRootA1_05240  538593 ..  538609 -    -3  -4.00042   GGCGGGACCAAACAA             TCA-GGC CTCG GCCGTGA              AGGGGGCATCGAAGG  58 140
NtRootA1_05210  536361 ..  536395 - -17.1  -2.52896   GGATTCCTCAATTGA     CCCGCTGGGGGACGG GATCT CCGTCCCCCAGCCGC     AATCCAAGCAAACCA  85 44
NtRootA1_05120 NONE
NtRootA1_05080  523746 ..  523764 -  -6.7  -3.53012   CCTGGCGCGGCTAAA             CCTGAGC CTGGT GCTCAAG             CTGGACCGCGACGGA  57 45
NtRootA1_05040  518967 ..  519019 - -16.7  -2.71924   CACCCGGCGTTAAAC GCTCGACGGCGGCAGGCGGCGCTGC TCT GATGAGCCGCCGCCCGCCGTCGTAC TCCCCGAAAGCCAGC  87 50
NtRootA1_05030  518304 ..  518321 -  -4.1  -3.92542   CCGATCCGCAAACAA             CGGTG TCCGCTTC CACCG              CCGTCTTCCTGGCCG  58 153
NtRootA1_04950  511119 ..  511162 - -28.2  -3.90112   CGCTGCTTAAGCAAA CGACGACGGCGGCCCTCACC AAAA GGTGGGGGCCGCCGTCGTTG TTAATCACCCAACTG 100 104
NtRootA1_04890 NONE
        ptbB  504276 ..  504298 - -11.2   -2.6155   GCGTCGAACATGAAG           CTCCCCGTGC TGA GCACGGAGGG           TGCGCGGCCAGCACA  62 311
NtRootA1_04710  484713 ..  484733 -  -3.1  -4.06419   CCTTCTCAGAAAGAA            CCTTGCGGT CGC ACCGCCCGA            CGTCGGCCACCCCCG  58 315
NtRootA1_04680 NONE
     glnA4-1 NONE
NtRootA1_04660 NONE
        feaB NONE
NtRootA1_04640  476594 ..  476643 - -36.7  -3.60234   TGAGAGAGCGTTAAA GCCCGACGGCGGGTGCGGACTTC ACGA AAAGTCCGCACCCGCCGTCGAGC TTCCCAGGGAGTTAC 100 37
NtRootA1_04630 NONE
NtRootA1_04620  474909 ..  474928 -  -3.5   -3.5882   CAGACTATTGCCAAA            CCCGGAT CAGCGC ATCCCGG             ACGACTACAGGTTTC  49 30
NtRootA1_04610  474255 ..  474270 -    -4  -3.43756   TATTCGAGCAAAAAC              GTCC-CA TCA TGTGGAC              TGGTGTGCATGCGTC  49 41
NtRootA1_04600  473204 ..  473222 -  -7.4  -2.59927   AATGGCCATAATGGA             CCTCCAAT GGG ATTGGCGG             GGGATGATCCCACTG  51 176
NtRootA1_04580  472858 ..  472884 - -13.6  -4.62069   GGTGTAGCTCAAAAA         CCGGGACGGCGG GGG CCGGCGTCCCGC         GTCAGACTCTGCGAG 100 45
NtRootA1_04570  472515 ..  472545 -  -9.7  -3.88232   CGGGGCAGACAACAA      CGGCGCCCCTACCCG TTG CCGG-A-GGGCGCCG      TCGTGGTCCGAAGGG  75 42
NtRootA1_04560 NONE
NtRootA1_04550  469189 ..  469226 - -12.7  -4.18018   CGCGGGCACGGAAAA   CGCCGGTGG-GGGCGC TGGGTGT GCACCCTCCACCGGTG   CTTTCAGTGGCAACC  93 47
NtRootA1_04540  467167 ..  467225 - -23.5  -3.53012   CGGCGTTCGTCTAAA TCGACAATGAGGGCATCTCTTCGCCCGCG GAA CGCCGGCGAAGAGATGCCCTCATT-TGG- AAACTGCTATTAGCT 100 35
       acs_1 NONE
NtRootA1_04510  463537 ..  463548 -  -5.8  -2.80994   TGGAATCTCAGGATA                CGCT CGCG AGCG                 CCTTCAGTCACTCCT  47 33
NtRootA1_04500  462298 ..  462336 - -34.8  -2.62616   GGACTTCGGACAGCA   CGACGCCGGCCGGACAGT CAG ACTGTCCGGCCGGCGTCG   TTGTTTCTTGGGCGA 100 260
NtRootA1_04490  461459 ..  461471 - -10.5  -3.14344   CAGGTTGTGGAGGAA                CCGCC GGG GGCGG                ACGGTCCGTCGATGC  64 126
NtRootA1_04390 NONE
NtRootA1_04380 NONE
NtRootA1_04370  449103 ..  449114 -  -3.6  -4.56597   GCTGGTGGGCAAAAA                GGGC CTGG ACCC                 TGGCGCGTCCCGTTG  70 65
NtRootA1_04340  444744 ..  444795 - -14.5  -3.65046   CCTTCAGCCCAATAA CGGTCGCCGCCCGGAAGA-TACCCC TCAA GGGGTACTTTTCCGGGCGGCT-CCT TTTTGGGGCTCAGTT  95 35
NtRootA1_04310  441794 ..  441805 -  -5.8  -2.93348   TGGAGGAACAGGACA                CGGT CTTC ACCG                 GAGACACCCTGTTCA  48 222
      purU_1 NONE
NtRootA1_04240  434564 ..  434607 - -13.8  -3.04799   TAGAACGGGGTAAGA CAGCGGCCCGGACACCGTTGC GAG GGGATGA-GTCCGGGCCGCTG GCCAACCAAAGCGTC  79 49
NtRootA1_04230 NONE
      folD_1 NONE
NtRootA1_04210 NONE
NtRootA1_04200  429837 ..  429858 -  -3.7  -2.79074   AGGAAAGATATATCA           GTCACATAC TATG GTATGTATC            ACACTGTGTCCAGAC  43 45
NtRootA1_04190 NONE
        yycR NONE
NtRootA1_04170 NONE
      fdhD_1  425698 ..  425713 -  -4.6  -3.65351   TTAGCTGCACGCAAA              CCGGCA GAAA TGGCGG               TTAGAGCCCGGCGAA  56 26
NtRootA1_04150  424616 ..  424630 -  -4.2  -5.06451   CAGCAGGGTAAAAAA               TGGCCA CGC TGGCGA               CGGCAGCGAGTTGTA  81 116
NtRootA1_04140 NONE
NtRootA1_04130  421933 ..  421986 - -16.9   -5.4505   TCCGCGAACAAAAAA GTCCGCAAACAAAAAGCAGGCGCCGG GAT CCGGCGCCTGCTTTTTTGTTG-GAAA TGAAGGGTTATCGCT 100 33
        dipZ  419192 ..  419207 -  -4.6  -3.27902   GGAGCGAACAAGACA              GGGCCT CCCA AGGCGC               AGGGGTTATCCGAAC  49 31
        yihV NONE
        yihT NONE
NtRootA1_04030 NONE
     ABC-MSP NONE
NtRootA1_04010 NONE
NtRootA1_04000 NONE
NtRootA1_03990 NONE
NtRootA1_03980  406928 ..  406947 -  -2.8  -5.00467   CGAATAACAACAAAA            GCCTATCGG ATG CCGA-AGTC            CGTATCCGTATATGA  76 8
      manB_1 NONE
NtRootA1_03960  404804 ..  404851 - -27.4  -3.40073   AGGCTGACCAAGTAA GTAGCAGATGATGCCGTTTTGA GCGT TCTAAACGGCATCATCTGCTAC TCAGTTGGGTTATCG 100 35
NtRootA1_03940 NONE
        lpsJ NONE
NtRootA1_03920  401069 ..  401124 -   -22  -3.18199   GAACCGCTAACCCAA CTGAGTCGCAGTTGTGCGCGTTTAGA CGCC TCAAAACGCGCACTGCTGCGACTTAG TTGGGTGGGTTAGAC 100 35
NtRootA1_03890 NONE
NtRootA1_03880  397697 ..  397715 -  -3.1  -2.84059   GATATATAGCAATGA            GC-CCTGA ATCG CCAGGCGC             GGCTGGCCTACCGCA  41 33
NtRootA1_03870  397022 ..  397033 -  -4.4  -3.10409   CACTAACTTACCGAA                CTTG GCGC CAAG                 CGCATCCCCTCATGA  47 78
NtRootA1_03860 NONE
NtRootA1_03850  395193 ..  395216 -  -6.8  -3.34043   GGTAGCACCGCACAA          GCTGATTGTCC GGG AGACAA-CAGC          ACCACCATGCCGGTG  58 49
NtRootA1_03800  389651 ..  389671 -  -5.4  -3.63367   GTGGTCAAGAAAAAT           CCGCACGCC GAAG AGC-TGCGG            GTCGCCTGGTTTGCG  55 364
NtRootA1_03710  384844 ..  384893 -  -2.9  -4.43844   GCAGCAGTGACAAAA GTC-GATGCGCGGAGCCAA-GGT GTGATG ACCATTGGCTCAACGAATCAGGC CGAGATCGACCATGA  66 12
NtRootA1_03700  383669 ..  383691 -  -5.5  -3.75933   AGACAGGCGATGAAA          TCCGTG-CGG CGGT CCGGCTCGGA           GTCGATGGGGTCTGC  60 262
NtRootA1_03670 NONE
NtRootA1_03660 NONE
NtRootA1_03650  378434 ..  378444 -  -8.2  -2.51966   GGAAAGGGCAGCAAT                 CCGG TTC CCGG                 GGCCATCTGGGAGGA  53 113
NtRootA1_03640 NONE
NtRootA1_03630  375390 ..  375409 -  -5.6  -3.05715   AACCTGTTCAGGGAA            GCTGCAGGC CCT GCCGGC-GC            ATCTTCAATGGATCC  49 374
NtRootA1_03610  373312 ..  373348 -  -5.9  -4.21462   AGCCACCAGCGAAAA   CCCCGTC-TTTCCC AGCAATAAAA GGGAAAGGGCGGGG    TTTTTCTTTACGTCC  66 136
NtRootA1_03580  370422 ..  370440 -  -4.4  -4.08767   CGGACGTCGTGAAAA             TGAGCGCC CAC GACGCCCG             TTGGCTATACCCGGG  61 376
NtRootA1_03560  369190 ..  369203 -  -4.5  -3.31144   GCCCCATGCTTACAA               GGCTA GCCC CAGCC                GAGCTCATGCAGGCG  49 14
NtRootA1_03550  367780 ..  367792 -  -4.7  -4.10331   TCAACGAAGTAGAAA                CCGCC TTG GCCGG                CAACAAGCTCCACCA  63 494
NtRootA1_03520  363106 ..  363147 - -23.1  -3.75332   ACGCTCCAACTCAAA GGCCGGTGCCTTCGAGGAC TCAC GTCTTCGAAGGTACCGGCC  TTCTGAGTTAATTTT 100 175
NtRootA1_03500  361926 ..  361945 -   -10  -3.61715   TACCGCGCGGAAGAA            GCTCGC-GG CTC CCAGCGAGC            CGGATGGCGAAAATT  70 89
        pbuG  359752 ..  359770 -    -3  -5.00616   CTGCGTTCCAAAAAA             CAGCTACA GCG TGTTGCGG             TGTCTGAGATGCCGG  76 47
        hutG  358732 ..  358763 -  -2.8  -3.65425   TCCACACAGGCTAAA      CGGAGGGCGGCGTC TAAG AACAGGGCCCTACG       CCAAGAGCGTGTTTA  52 21
NtRootA1_03460  358142 ..  358165 - -11.7  -2.73441   CATGATCGCTTAAAG          GCCGCGGGA TGGCAC TCCCGCGAC           ACGGCAGTTGCTGAC  70 90
NtRootA1_03450 NONE
NtRootA1_03440  352718 ..  352772 - -20.8  -3.82946   GCAGCTTAAACAGAA CCGGGGCTCGTTCCCTTTCCGC GGGTAGTAGAT GCGGAAGAGGAACGGGCCCCGG TTTTTTGTGCGCTGG 100 65
NtRootA1_03400  348037 ..  348061 -  -4.2  -3.96148   TTCCTGGAGGACAAA          GTGCCGGC TGAGCAATG GCCGGTAC          TGGCTGCGCGCATCC  58 117
NtRootA1_03370  345933 ..  345980 -  -4.7  -3.57144   GGTGCGATCCCGAAA CCGGTGTGTGTCACCTGCCTGA AGACA CCAGCCCGGCGAG-CACCCCGG TCGACGACCAGGTCA  53 38
NtRootA1_03330  340632 ..  340666 - -17.5  -3.32844   TCCGCGAGGTGACAA     TTAATGCCAATGTTC TGCGC GAACATTGGCATTAA     CTGTCACTTGGACGG  93 46
NtRootA1_03300  337218 ..  337250 -  -4.7  -2.78935   ATACTTTTGAGCACA      CCATGATCATCGCCG ACC CCGCCATGCTCAAGG      GCCGCCGCTACGGGA  44 196
NtRootA1_03250  333851 ..  333863 -  -4.8  -2.59431   TGGGGCTAGAAGTTA                GACG TCCTC CGTC                AGGGTCACGCCTGGG  43 10
NtRootA1_03200  329919 ..  329948 -  -7.8  -3.13403   TGTTCGCGACGAAGA       CCTGGACCTGCT GGGCCA AGCACGTCCGGG        ACAGATGGTTCATTT  56 61
NtRootA1_03160  327159 ..  327185 -  -8.7  -2.75844   TCGCGCACTCCAAAG        GCCGGTCTGCCC CAAA AGGC-GACCAGC         GGTAAGTGCGGGAGG  58 49
NtRootA1_03140  325361 ..  325371 -  -3.2   -3.0894   GAACGATCTAGTGAA                 GCAA TGC TCGC                 ACGCTGGGTCCGCTG  43 82
NtRootA1_03130 NONE
NtRootA1_03120  323320 ..  323375 - -26.4  -3.25072   GGCAGCACAACCCAA CTGAGTCGCATTAGAGCGCGTTTAGA GCCC TCTAAACGCGCTCAGCTGCGACTCAG TTGGGAGAGAACGCG 100 22
NtRootA1_03100  321113 ..  321139 -  -5.6  -3.53012   CGTGCCTGCTGGAAA         GGCGCCCGGGAC AAT GCTCCGGTGGCC         AACTGCAGCGCGTCA  55 400
NtRootA1_02980 NONE
NtRootA1_02970 NONE
NtRootA1_02960  305109 ..  305119 -  -6.8  -2.66964   CCATCGACTACAGCA                 CCTG CTT CAGG                 AATGCCTGGGTGCGT  50 7
NtRootA1_02950  303926 ..  303962 - -21.7  -3.64487   GTAGATTGTCAACAA    TACACGATTCGCGGGCC TTT AGCCCGCGAATCGTGTT    GTGCCTAGTTCTTGA 100 30
        gabT NONE
NtRootA1_02930 NONE
NtRootA1_02920  300351 ..  300394 -   -24  -3.20164   GCACAGGCAAGCTAA CTGCAGGAAGGGCCCGGTTC AATT GAACCGGGCCCTTCCTGTAT GGAGACTTTCCTAAG 100 36
NtRootA1_02900  299372 ..  299384 -  -4.8  -3.53444   TCCTCTAAGAACCAA                GGAC GGCCA GTCC                CTGTCCCGGGCTCCC  53 178
NtRootA1_02890  296951 ..  296962 -  -3.6  -3.72027   ACCTGCCATGAAGAA                GCGA CGCC CCGC                 TACCCCGACTCCAGA  54 255
NtRootA1_02870  294600 ..  294616 -  -5.7  -3.14931   GTCATCCGCTACGAA              GGCCCCC GAG GTGGACC              AGGCATGCAGGAAAT  51 421
NtRootA1_02850  291738 ..  291750 -  -3.3  -3.15056   AGCTGGAACGGAACA                CCCTG AAG CAGGT                CCTTATCAGCTCGGA  44 500
NtRootA1_02830  290386 ..  290414 -  -3.1  -2.90075   CGGGGCGCAATGAGA       CGGGGCGGATTC GTCGTT GAACCCGTCC-G        AATGGTGTGGTGGGC  42 62
NtRootA1_02820  289811 ..  289847 - -30.3  -3.78934   CGGGGTGCAGAAGAA    CGACGGCGGTACGCACC TAT GGCGCGTACCGCCGTCG    TTGTTTCAAAAGCGG 100 31
NtRootA1_02800  287602 ..  287633 -  -2.8  -3.66178   CCTTGGAAGGCCAAA      CGCGCGACGACGGAC TCG GCCAGTTG-CGCTCG      CTCGGCTTGCGTGTT  51 376
NtRootA1_02780  285465 ..  285501 -  -3.7  -2.83894   ATCAGTACCAGGACA   CGCTCACCGCCTTGGCA CTCGT TGCC--GCCGGTGAGGG   GGTTGCGATCGTACC  44 410
NtRootA1_02760  284248 ..  284262 -    -7    -4.431   CAGGGATTTAGAAAA               CAGCCC TAG GGGCAG               TTGGCCACCGTTTGG  76 16
        mntH  282006 ..  282033 -    -4  -3.56092   CGATCACCCCTGAAA        CCCACGAGACGGC CAT GCGGAC-CGTAGG        GCGCCAGCAAGCCAG  53 151
         idi NONE
NtRootA1_02720 NONE
NtRootA1_02710 NONE
NtRootA1_02700  277223 ..  277236 -  -2.3  -2.72799   CGGCCAGATAGACGA               TGCCC ATCA GCGCA                TCCTGCTGGCGGTAC  39 18
NtRootA1_02690  276817 ..  276831 -  -4.2  -3.39803   TAGTGAGAGCCACAA               GTACGT CAT ACGTTC               TTCTTCTCAAGTCGC  49 16
NtRootA1_02680  275302 ..  275315 -  -4.5  -3.76492   GGCAAGGTGATGAAA               CCCAA GGAC CTGGG                CGACCGCTTGGGCAT  56 336
NtRootA1_02660  273283 ..  273304 -  -3.6  -3.93288   CGGGATGGAACCAAA           GGCCACCG GTGAAA CAGTTGCC            GTACGGCTATCGCCC  56 312
NtRootA1_02640  272396 ..  272406 -  -5.4  -2.70932   CGTCGCGCTGAAGCA                 CTTC ACC GAAG                 CGTTGTTCATTGACT  44 509
NtRootA1_02590 NONE
NtRootA1_02580  266866 ..  266916 -  -6.7  -3.54129   CACATTCCGTGGAAA GCACGACGGCGGCAGGCCGGTAAG TGCG CCAGTCA-CCTGCCGTCGTCGTAC CGATACTTGGGTGTT  58 39
NtRootA1_02540 NONE
NtRootA1_02530  262987 ..  263020 -   -19  -3.53012   TCGGGGCGCGCCAAA     GGGCATGCCGCACT CCCTGT AGTGCGACATGCCC      TTGCATCGGATCCTG  95 259
NtRootA1_02510 NONE
NtRootA1_02500 NONE
NtRootA1_02490 NONE
NtRootA1_02480 NONE
NtRootA1_02470  256754 ..  256807 - -24.3  -3.18264   TTCCTCATGGACTAA CCGTTACATGTGTAACTAATAGTGT CAAT ACGCTAATAGTTACACATGTAACGG TATCTGCACGTCTCG 100 91
NtRootA1_02460 NONE
NtRootA1_02450  254932 ..  254960 -  -9.5  -3.18681   GGTGAAGGCCATGAA        GGACGCCGCCCAA CTG CTGGGCAACACCC        CCACCGTGGCGCGTA  61 314
NtRootA1_02420  252770 ..  252791 -  -8.7  -2.55999   TTATGGCACACCAAC           CCCGGAGCAG GAA CTGC-CCGGA           CAGGGATCGGAGCGA  53 388
NtRootA1_02400 NONE
NtRootA1_02390  251720 ..  251756 - -10.7  -3.13164   CGGCTAATTAGCGAA    GCGGCGTCGGCCGGTGA TGA TGAACGGCCGACGCGGT    TTTCTTTATGAATAT  66 40
        nifS NONE
NtRootA1_02360 NONE
NtRootA1_02350 NONE
NtRootA1_02340  246202 ..  246224 -  -6.9   -4.8622   CGCGGCAAGGAAAAA          GCGGCCGACG ACGA CG-CTGCCGC           CAGCAAAACTACCAG  83 165
NtRootA1_02320  242779 ..  242804 - -11.9  -2.83164   CTAGGTAGCAGCACA         GCGCGTTTAGA GCTC TCAAAACGCGC          TCAAGTGCGACCTAG  70 37
NtRootA1_02290  240962 ..  240976 -  -5.7  -4.32034   CCATTAGCAGCAAAA               GAGTG GCCGA CACTC               CCTGAAATAGTGAAG  69 184
NtRootA1_02280  238130 ..  238179 - -15.8  -3.01924   GATCGCGTCTTAACA GCCGTAGCCACCAATCCGAAGG AGAGCG CCTGGGGATTGGTGGCTACGAT GGGCGGCGGGTGGCC  88 87
NtRootA1_02260 NONE
NtRootA1_02250  234995 ..  235006 -  -2.2  -2.79023   CAAGCGCACCAAGGA                CTCG GCCG CGAA                 CTGTTGCATGCTGCA  39 263
NtRootA1_02220  232904 ..  232914 -  -4.6  -3.40403   GGGGCTGGAGGACAA                 CGCC GAG GGCA                 AGTCTGTTTCCATCC  53 95
NtRootA1_02170  224870 ..  224894 -  -6.5  -4.42386   TCGTGACGGAGAAAA          CGGAAAAAG ATTCAGG CTCTTTCCG          AGCAGGCTCGGCGCT  74 73
NtRootA1_02160  222000 ..  222021 -  -4.3  -3.79906   CCAGTGGCAGAAGAA           GCGGGCC ACGACCTA GGCCTGC            CGCTGGCTCCGGACA  57 16
NtRootA1_02140 NONE
NtRootA1_02130  218531 ..  218541 -  -4.6  -2.91681   TGTGAAGCTCATACA                 GCGG CCC CCAC                 GGTGTTCGGAGCTGT  46 8
NtRootA1_02120 NONE
NtRootA1_02110  215743 ..  215763 -  -6.7  -3.01708   GAAATGGGACAGATA            TGCCGAGGG GAA CTCGCGGCA            GTGGAAGCCACTGCG  51 361
NtRootA1_02070  212871 ..  212882 -  -7.2  -2.70932   CGCTGCCTCGAAGCA                GGCG CCCA CGCC                 AGCGGTTGCACCCTG  52 368
NtRootA1_02040  209020 ..  209058 -  -6.1   -3.1355   GCCAGCCACATGGAA  GCGG-TTCAGCGTCA-CAT CGC AGGCTGACGCCGAAACCAC  CAAGCCGCTCGCCTA  51 446
NtRootA1_01980 NONE
NtRootA1_01970  202192 ..  202237 -  -9.1  -2.78018   AGCCCTTACCAAGTA GGACAGCACTTGTCGCT CTGAGCATGTGC TGTGACAAGTGCTGTCC CTTGGTTATGGGTCT  58 56
NtRootA1_01950  200693 ..  200713 -  -2.3  -4.11484   CTGAATCTTTGAAAA            TGCTGGCCC GCT GGGCAGGCC            GTTCCTGCAGACTAG  59 78
NtRootA1_01940  200389 ..  200429 - -23.7  -2.62263   AGCTCGCCGAGACGA  CAGTTAATGCCAATGTTCC TCT GAAACATTGGCATTAACTG  TCATCTCGCGATGGG 100 44
NtRootA1_01920 NONE
NtRootA1_01910 NONE
NtRootA1_01900 NONE
NtRootA1_01890 NONE
NtRootA1_01880  193924 ..  193949 - -10.4  -2.62263   ATCTGCTTCACACCA         GGCGCTGCTT CACAGC ATGCAGCGCC          CTGAACTACCCAAGG  62 475
NtRootA1_01850  190721 ..  190769 -  -7.1  -3.31144   GTTCGATTTCGACAA GCAGCCCACCTTCGCCACCCCTG AAG CAGCGAAGGCCTGGATGGGCAGC ACGCAGTACGCCCAG  55 147
NtRootA1_01730 NONE
NtRootA1_01720  179807 ..  179840 - -20.4  -3.02144   TCATCGGGCTTAAGA     CTGTGGCGACGGGT TGATTT ACCCGCCGCCACAG      CAACTGCCGTTCCCT 100 40
NtRootA1_01680 NONE
NtRootA1_01670  175783 ..  175811 -  -2.4  -2.73007   AACATTCTTTGAAAT        CGCTGGACTC CCGTGTTCC AAGTCCAGCC        TAATGGGTTTTTGAC  39 71
NtRootA1_01660 NONE
NtRootA1_01650 NONE
NtRootA1_01640  174074 ..  174086 -  -4.1  -3.48276   CCTGCCCTCAGAGAA                CGTCA GTG TAACG                CTCGACGGCGGCCGA  51 97
NtRootA1_01620  171444 ..  171464 -  -2.5  -2.72829   CAGACGTGGGTAAAT            TTCGGGG TTTTTCG CCCCTAA            TCCAGCTCTCCCAAT  39 22
NtRootA1_01610 NONE
NtRootA1_01600  169430 ..  169485 -   -36  -3.05384   CTTTTTTGCACCCAA CTAAGTCGCATTTGTGCGCGTTTTGA GCCC TCAAAACGCGCACAAATGCGACTCAG TTGGGTCGGAGGTCC 100 22
NtRootA1_01550 NONE
NtRootA1_01540 NONE
        radA  161397 ..  161411 -  -5.6  -3.22223   TAACCGCACCAGCAA               GCCCCA AAG TGGGTC               ATTTCGTTATGTACG  51 242
        disA  159895 ..  159910 -  -7.5  -3.23692   CATGACCATCACCAA              CGGCG GAACGG CGCCG               TGTGAGGTCAACGTG  56 301
NtRootA1_01500 NONE
NtRootA1_01490 NONE
NtRootA1_01480  156629 ..  156645 -  -9.3  -3.33696   CGCGCGGGCAATGAA              CGCCCCC GAC GGCGGCG              CGCGCCGCGAGCTGG  63 439
NtRootA1_01460  155547 ..  155557 -  -4.6  -3.33696   CCTGGGGGCAAGCAA                 GGCG GAG CACC                 AGCCGGGGACCACAT  50 134
NtRootA1_01300 NONE
NtRootA1_01290  138968 ..  138987 -  -3.4  -2.53876   CTTGAGCCTAACCGA            GCCACCTG AGCG CCGGCAGC             ATGCTGGACGCTATG  39 51
NtRootA1_01280  138078 ..  138109 - -15.2   -3.9163   AAACGACACACCAAA      CACACCAACGTGGG CAAG CCTACGCTGGTGTG       AAACTCCTTAGCCCG 100 33
NtRootA1_01270  131009 ..  131040 - -15.2   -3.9163   AAACGACACACCAAA      CACACCAACGTGGG CAAG CCTACGCTGGTGTG       AAACTCCTTAGCCCG 100 400
NtRootA1_01260  125094 ..  125104 -  -8.2  -2.90496   TTCCCCTTCAAATTA                 CCGG TTT CCGG                 TGGTGCTTTGTGTGC  56 12
NtRootA1_01240  122993 ..  123007 -  -4.9  -4.46835   AGAACTGCAAAGAAA               CACCG TTCCG CGGCG               AAGGGCTGGCAATCA  71 107
NtRootA1_01100  110606 ..  110627 - -10.1  -4.35524   CGCCGAAATCGAAAA           GCTCAGCAG CCAT CTGCTGGGC            AACATGGATTCCCTG  85 514
         ppa  107686 ..  107738 -   -30  -3.53012   CCCGCGTTGCTTAAA GCACGACGGCGACTGGTGCGGTTC ACAGG GAACAGCACCAGCCGCCGTCGAGC CCAACTAGGTCGCAC 100 92
NtRootA1_01060 NONE
NtRootA1_01050 NONE
NtRootA1_01040 NONE
NtRootA1_01030  104431 ..  104448 -  -5.5  -2.80622   ACATAGTGGATCACA             TGCTACC GGCT GGTAGCC              GCTGTGCAAGGGCTT  47 88
NtRootA1_01020  103736 ..  103783 - -17.2  -2.52676   TACCCGCCCAACTGA GTCGCAGTTAAGCCCGTTTTGA GATC TCAGAACGGCATTAACTGCGAC TCAGTTGGGTTCGCG  85 62
NtRootA1_00980  100395 ..  100413 -    -3  -3.55622   GGTAAGGGGCGGAAA             GCCTCACC GCC GTTGACGC             CACGCTAATTTTGGC  49 50
NtRootA1_00950   96028 ..   96050 - -11.2  -3.34517   AGCCGCCGTGAAAGA           GGCGGCCGAA AGC CTCGGCGGCC           TGGATGGGGTGGTGA  69 470
NtRootA1_00870   88357 ..   88384 -  -2.6  -3.85092   ACTACCGAGAGGAAA        CGCAGT-CCACCA TCG CGGAGGCACTGGG        CATGTCCCAAATGCA  54 170
NtRootA1_00850 NONE
NtRootA1_00840   86095 ..   86120 -  -6.9  -3.14564   GGAGGGCGTGACGAA         GGC-CAGTGC GCTGGAG GCACTGCGCC         AGAGGATCGGCACGG  53 250
NtRootA1_00800   81427 ..   81461 -  -4.8  -4.02334   CACCGAGATGACAAA     GACGGCCAGGGCATGA TCG TCAATCCCAAGCCCTC     CGGCGAGAACAAGGA  63 194
NtRootA1_00760 NONE
NtRootA1_00750 NONE
NtRootA1_00740   76056 ..   76087 -  -6.6  -3.66178   GTTGTTAAGCGCAAA      CCGG-GTCGGTCA GTTGCCG TGAGCGACGCCGG      AATTCGAAGGCCCTA  61 48
NtRootA1_00720   73305 ..   73361 -  -8.8  -2.70708   AAGGCAACCACACCA TCCGGCGCATCCTCAGGCTCTG-GACGC AGG ACGCCGCAGAGGCTGAGGACTCGC-AAA CCGCATAAGGACGCG  57 50
NtRootA1_00690   70438 ..   70453 -    -6  -2.64735   AGCTGAGGTAGAGGA              GGACGC CGGG GCGGCC               TAACCCCCTATTTCT  48 33
NtRootA1_00660 NONE
NtRootA1_00650   68266 ..   68317 - -31.9  -3.59649   AAACAATTTCCTAAA CGCACACGACGACGGAACCCCCGC CTACC GCGGGGGTTCCGTCGTCGT-TACG GCAGCAGCAGGTCAA 100 37
NtRootA1_00600   63013 ..   63031 -  -4.4  -3.64703   GGGCCGGGACGTAAA             CGTTCCGG GAG CTGGAGCG             GCAGGCGGGTTCCCG  53 440
NtRootA1_00570   58972 ..   59009 -  -5.6  -3.55444   CGTGCAGTCTTGAAA  CTCCTCAGCCAGCCGACG GCTT CTTCGGCTGGC--AGCAG   CCTGACCGCTCTTTT  57 311
NtRootA1_00540   56774 ..   56786 -  -5.5  -4.12296   TCGAGAACGAAACAA                GCGAA CTG CTCGC                CGAGTTCACCCCTGC  67 463
NtRootA1_00490 NONE
NtRootA1_00480 NONE
NtRootA1_00470   50150 ..   50160 -  -2.4  -2.78384   CTTGGCTGGAGCAGA                 GCTG GAG CCGC                 GGGACGCTAGTCCTT  39 32
        xyoA   48639 ..   48649 -  -3.2  -3.77831   CCATGAAGATGGAAA                 CGCA GGT TGCA                 GCCCACCGAGCAGGC  54 174
NtRootA1_00410   42195 ..   42218 - -10.2  -3.61398   GGGTTCCCGCAAGAA          GGGCAAGCGC TGAC GCTCCTGCCC           GGTTGCTCCGCGATT  71 120
NtRootA1_00390   40954 ..   40991 - -22.1  -3.71607   CCAAGACTAGTTAAA   CAGCTATGGCCGGGACC AACT GGTCCCGGCCATAGCCC    GTTCAAACTATGCGT 100 33
NtRootA1_00370   39469 ..   39479 -  -2.4   -4.7254   ATTTCCGATGAAAAA                 GCGG ACG CCGT                 GTTCGAGCTCAGCGC  72 425
NtRootA1_00350   37540 ..   37552 -  -6.3  -3.24425   GATACAAGTTATTAA                CTTGT ACT ACAAG                AACTCCTCAAACTCC  54 53
NtRootA1_00340 NONE
NtRootA1_00330   35577 ..   35624 - -33.2  -2.52464   GTTTCCCCCAACTCA GTCGCATTAGTGCGCGTTTAGA CGGC TCTAAACGCGCACTAATGCGAC TTAGTTGGGCTGCGA 100 50
NtRootA1_00320 NONE
        fhaB NONE
NtRootA1_00300 NONE
NtRootA1_00290 NONE
NtRootA1_00280 NONE
NtRootA1_00270 NONE
NtRootA1_00260   25261 ..   25290 -  -8.6  -2.85351   GTCCTGGAGATCACA       GCCGA-GACCACG AACGG CGTGGTCATGGGC       CTGCAGCACAAGACC  55 216
NtRootA1_00230 NONE
NtRootA1_00220 NONE
NtRootA1_00210 NONE
         ogt NONE
        alkB NONE
NtRootA1_00180   20117 ..   20138 -  -8.1  -3.49475   TGGATGTCCACAGAA           CTTATCCAC TCCT GTGGATAAA            GTTACGCACTTCTGT  62 79
NtRootA1_00170   19642 ..   19654 -  -5.5  -3.44325   ATTGTGGACAACTAA                GCCAA TTC CTGGC                CATGTGTGGATAAAA  53 91
NtRootA1_00160   18731 ..   18748 -  -6.3  -3.53444   CGGGGCAAGAACCAA             GCCCTGCT GCA AGCAG-GC             GGCCTCATCCTCGTG  57 75
NtRootA1_00130   16205 ..   16243 - -22.7  -3.58533   TTACAAGGTGGCAAA  CA-CTGAAGGGATCCCGG CCAG CCGGGATCCCTTCAGATG   ATGTTTCAGTGACGG 100 68
NtRootA1_00120   15204 ..   15223 -  -4.2  -2.91199   CAAGGGCGAAGCAGA            CCAGC-GGG AGG CCGAGCTGG            GAACTGACTGAGCTT  44 69
NtRootA1_00100   12153 ..   12176 - -16.8  -4.81212   TCCACCATAAGAAAA          GTCCCGGTCA GAAA TGACCGGGAC           TTTTGCTTTTAACTC 100 49
