locus-tag class description NtRootA4_00020 PF00248 Aldo/keto reductase family NtRootA4_00030 PF00248 Aldo/keto reductase family NtRootA4_00050 PF13936 Helix-turn-helix domain NtRootA4_00050 PF00665 Integrase core domain NtRootA4_00060 PF07311 Dodecin NtRootA4_00100 PF02796 Helix-turn-helix domain of resolvase NtRootA4_00100 PF00239 Resolvase, N terminal domain NtRootA4_00110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA4_00110 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA4_00110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA4_00120 PF04199 Putative cyclase NtRootA4_00130 PF01593 Flavin containing amine oxidoreductase NtRootA4_00140 PF01613 Flavin reductase like domain NtRootA4_00180 PF14525 AraC-binding-like domain NtRootA4_00180 PF12833 Helix-turn-helix domain NtRootA4_00190 PF07729 FCD domain NtRootA4_00190 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_00200 PF00561 alpha/beta hydrolase fold NtRootA4_00220 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootA4_00220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootA4_00230 PF02447 GntP family permease NtRootA4_00240 PF01116 Fructose-bisphosphate aldolase class-II NtRootA4_00340 PF00282 Pyridoxal-dependent decarboxylase conserved domain NtRootA4_00350 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NtRootA4_00370 PF04183 IucA / IucC family NtRootA4_00370 PF06276 Ferric iron reductase FhuF-like transporter NtRootA4_00410 PF00005 ABC transporter NtRootA4_00440 PF00535 Glycosyl transferase family 2 NtRootA4_00460 PF00398 Ribosomal RNA adenine dimethylase NtRootA4_00470 PF00202 Aminotransferase class-III NtRootA4_00540 PF00583 Acetyltransferase (GNAT) family NtRootA4_00570 PF00892 EamA-like transporter family NtRootA4_00580 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_00580 PF00155 Aminotransferase class I and II NtRootA4_00590 PF07729 FCD domain NtRootA4_00590 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_00600 PF13416 Bacterial extracellular solute-binding protein NtRootA4_00610 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_00620 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_00630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootA4_00630 PF13378 Enolase C-terminal domain-like NtRootA4_00640 PF00171 Aldehyde dehydrogenase family NtRootA4_00660 PF00083 Sugar (and other) transporter NtRootA4_00670 PF13649 Methyltransferase domain NtRootA4_00670 PF17827 PrmC N-terminal domain NtRootA4_00700 PF04679 ATP dependent DNA ligase C terminal region NtRootA4_00700 PF13298 DNA polymerase Ligase (LigD) NtRootA4_00700 PF01068 ATP dependent DNA ligase domain NtRootA4_00710 PF02735 Ku70/Ku80 beta-barrel domain NtRootA4_00720 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_00730 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_00760 PF07729 FCD domain NtRootA4_00760 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_00810 PF00210 Ferritin-like domain NtRootA4_00840 PF13977 BetI-type transcriptional repressor, C-terminal NtRootA4_00840 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_00860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NtRootA4_00860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NtRootA4_00870 PF00294 pfkB family carbohydrate kinase NtRootA4_00880 PF00455 DeoR C terminal sensor domain NtRootA4_00880 PF08220 DeoR-like helix-turn-helix domain NtRootA4_00930 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootA4_00970 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_00980 PF13419 Haloacid dehalogenase-like hydrolase NtRootA4_00990 PF03633 Glycosyl hydrolase family 65, C-terminal domain NtRootA4_00990 PF03636 Glycosyl hydrolase family 65, N-terminal domain NtRootA4_00990 PF03632 Glycosyl hydrolase family 65 central catalytic domain NtRootA4_01030 PF01409 tRNA synthetases class II core domain (F) NtRootA4_01030 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NtRootA4_01050 PF01047 MarR family NtRootA4_01060 PF01040 UbiA prenyltransferase family NtRootA4_01080 PF01593 Flavin containing amine oxidoreductase NtRootA4_01100 PF00348 Polyprenyl synthetase NtRootA4_01110 PF00293 NUDIX domain NtRootA4_01180 PF00920 Dehydratase family NtRootA4_01200 PF03466 LysR substrate binding domain NtRootA4_01200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_01210 PF00892 EamA-like transporter family NtRootA4_01220 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_01230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_01230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_01240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_01240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_01250 PF01261 Xylose isomerase-like TIM barrel NtRootA4_01260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_01260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_01270 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_01310 PF03746 LamB/YcsF family NtRootA4_01320 PF02626 Carboxyltransferase domain, subdomain A and B NtRootA4_01340 PF04286 Protein of unknown function (DUF445) NtRootA4_01350 PF03009 Glycerophosphoryl diester phosphodiesterase family NtRootA4_01410 PF01910 Thiamine-binding protein NtRootA4_01420 PF01596 O-methyltransferase NtRootA4_01430 PF00583 Acetyltransferase (GNAT) family NtRootA4_01460 PF00664 ABC transporter transmembrane region NtRootA4_01460 PF00005 ABC transporter NtRootA4_01470 PF00005 ABC transporter NtRootA4_01470 PF00664 ABC transporter transmembrane region NtRootA4_01480 PF12833 Helix-turn-helix domain NtRootA4_01480 PF02311 AraC-like ligand binding domain NtRootA4_01520 PF01032 FecCD transport family NtRootA4_01530 PF01032 FecCD transport family NtRootA4_01540 PF00005 ABC transporter NtRootA4_01550 PF00665 Integrase core domain NtRootA4_01550 PF13936 Helix-turn-helix domain NtRootA4_01570 PF00083 Sugar (and other) transporter NtRootA4_01590 PF13936 Helix-turn-helix domain NtRootA4_01590 PF00665 Integrase core domain NtRootA4_01610 PF00324 Amino acid permease NtRootA4_01650 PF17391 Urocanase N-terminal domain NtRootA4_01650 PF17392 Urocanase C-terminal domain NtRootA4_01650 PF01175 Urocanase Rossmann-like domain NtRootA4_01660 PF00221 Aromatic amino acid lyase NtRootA4_01690 PF00665 Integrase core domain NtRootA4_01690 PF13936 Helix-turn-helix domain NtRootA4_01710 PF00491 Arginase family NtRootA4_01720 PF00860 Permease family NtRootA4_01770 PF00582 Universal stress protein family NtRootA4_01780 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootA4_01780 PF00391 PEP-utilising enzyme, mobile domain NtRootA4_01790 PF01545 Cation efflux family NtRootA4_01790 PF16916 Dimerisation domain of Zinc Transporter NtRootA4_01810 PF00294 pfkB family carbohydrate kinase NtRootA4_01970 PF01545 Cation efflux family NtRootA4_01990 PF01022 Bacterial regulatory protein, arsR family NtRootA4_02020 PF01547 Bacterial extracellular solute-binding protein NtRootA4_02030 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_02040 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_02060 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_02100 PF00072 Response regulator receiver domain NtRootA4_02100 PF00196 Bacterial regulatory proteins, luxR family NtRootA4_02110 PF07730 Histidine kinase NtRootA4_02130 PF12796 Ankyrin repeats (3 copies) NtRootA4_02140 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootA4_02140 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootA4_02150 PF01144 Coenzyme A transferase NtRootA4_02160 PF01144 Coenzyme A transferase NtRootA4_02210 PF02469 Fasciclin domain NtRootA4_02230 PF02028 BCCT, betaine/carnitine/choline family transporter NtRootA4_02240 PF09339 IclR helix-turn-helix domain NtRootA4_02240 PF01614 Bacterial transcriptional regulator NtRootA4_02250 PF02634 FdhD/NarQ family NtRootA4_02260 PF00994 Probable molybdopterin binding domain NtRootA4_02260 PF03454 MoeA C-terminal region (domain IV) NtRootA4_02260 PF03453 MoeA N-terminal region (domain I and II) NtRootA4_02270 PF00107 Zinc-binding dehydrogenase NtRootA4_02270 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_02280 PF00384 Molybdopterin oxidoreductase NtRootA4_02280 PF01568 Molydopterin dinucleotide binding domain NtRootA4_02290 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NtRootA4_02290 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NtRootA4_02300 PF04961 Formiminotransferase-cyclodeaminase NtRootA4_02310 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA4_02310 PF01571 Aminomethyltransferase folate-binding domain NtRootA4_02310 PF16350 FAD dependent oxidoreductase central domain NtRootA4_02310 PF01266 FAD dependent oxidoreductase NtRootA4_02320 PF00551 Formyl transferase NtRootA4_02330 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_02330 PF07729 FCD domain NtRootA4_02340 PF01680 SOR/SNZ family NtRootA4_02360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_02360 PF03466 LysR substrate binding domain NtRootA4_02370 PF00355 Rieske [2Fe-2S] domain NtRootA4_02370 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NtRootA4_02380 PF00175 Oxidoreductase NAD-binding domain NtRootA4_02380 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootA4_02380 PF00970 Oxidoreductase FAD-binding domain NtRootA4_02390 PF00072 Response regulator receiver domain NtRootA4_02390 PF00196 Bacterial regulatory proteins, luxR family NtRootA4_02400 PF01380 SIS domain NtRootA4_02410 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NtRootA4_02440 PF00875 DNA photolyase NtRootA4_02440 PF03441 FAD binding domain of DNA photolyase NtRootA4_02460 PF00171 Aldehyde dehydrogenase family NtRootA4_02470 PF00378 Enoyl-CoA hydratase/isomerase NtRootA4_02480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootA4_02480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootA4_02490 PF00378 Enoyl-CoA hydratase/isomerase NtRootA4_02530 PF00501 AMP-binding enzyme NtRootA4_02530 PF13193 AMP-binding enzyme C-terminal domain NtRootA4_02540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA4_02540 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA4_02540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA4_02560 PF00732 GMC oxidoreductase NtRootA4_02560 PF05199 GMC oxidoreductase NtRootA4_02570 PF00171 Aldehyde dehydrogenase family NtRootA4_02610 PF09278 MerR, DNA binding NtRootA4_02610 PF00376 MerR family regulatory protein NtRootA4_02620 PF03551 Transcriptional regulator PadR-like family NtRootA4_02640 PF02540 NAD synthase NtRootA4_02650 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_02670 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_02680 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_02700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_02700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_02720 PF02614 Glucuronate isomerase NtRootA4_02730 PF01232 Mannitol dehydrogenase Rossmann domain NtRootA4_02730 PF08125 Mannitol dehydrogenase C-terminal domain NtRootA4_02740 PF13378 Enolase C-terminal domain-like NtRootA4_02740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootA4_02750 PF01202 Shikimate kinase NtRootA4_02760 PF13407 Periplasmic binding protein domain NtRootA4_02770 PF00005 ABC transporter NtRootA4_02780 PF02653 Branched-chain amino acid transport system / permease component NtRootA4_02790 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_02800 PF00156 Phosphoribosyl transferase domain NtRootA4_02830 PF13344 Haloacid dehalogenase-like hydrolase NtRootA4_02860 PF00665 Integrase core domain NtRootA4_02860 PF13936 Helix-turn-helix domain NtRootA4_02880 PF13936 Helix-turn-helix domain NtRootA4_02880 PF00665 Integrase core domain NtRootA4_02890 PF01116 Fructose-bisphosphate aldolase class-II NtRootA4_02910 PF00005 ABC transporter NtRootA4_02920 PF01032 FecCD transport family NtRootA4_02930 PF01032 FecCD transport family NtRootA4_02940 PF01497 Periplasmic binding protein NtRootA4_03010 PF00709 Adenylosuccinate synthetase NtRootA4_03020 PF07689 KaiB domain NtRootA4_03020 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_03020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_03040 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_03050 PF07690 Major Facilitator Superfamily NtRootA4_03060 PF08450 SMP-30/Gluconolactonase/LRE-like region NtRootA4_03080 PF14765 Polyketide synthase dehydratase NtRootA4_03080 PF00698 Acyl transferase domain NtRootA4_03080 PF00550 Phosphopantetheine attachment site NtRootA4_03080 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootA4_03080 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootA4_03080 PF00107 Zinc-binding dehydrogenase NtRootA4_03080 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_03080 PF16197 Ketoacyl-synthetase C-terminal extension NtRootA4_03080 PF08659 KR domain NtRootA4_03090 PF00005 ABC transporter NtRootA4_03090 PF16326 ABC transporter C-terminal domain NtRootA4_03090 PF12848 ABC transporter NtRootA4_03110 PF00561 alpha/beta hydrolase fold NtRootA4_03130 PF07690 Major Facilitator Superfamily NtRootA4_03130 PF00083 Sugar (and other) transporter NtRootA4_03140 PF02080 TrkA-C domain NtRootA4_03140 PF03471 Transporter associated domain NtRootA4_03140 PF00999 Sodium/hydrogen exchanger family NtRootA4_03150 PF11999 Protein of unknown function (DUF3494) NtRootA4_03150 PF02368 Bacterial Ig-like domain (group 2) NtRootA4_03180 PF07859 alpha/beta hydrolase fold NtRootA4_03200 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_03210 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA4_03220 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_03230 PF00005 ABC transporter NtRootA4_03240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_03240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_03250 PF01266 FAD dependent oxidoreductase NtRootA4_03280 PF01594 AI-2E family transporter NtRootA4_03340 PF13380 CoA binding domain NtRootA4_03370 PF04237 YjbR NtRootA4_03380 PF01547 Bacterial extracellular solute-binding protein NtRootA4_03390 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_03400 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_03420 PF14525 AraC-binding-like domain NtRootA4_03420 PF12833 Helix-turn-helix domain NtRootA4_03450 PF01613 Flavin reductase like domain NtRootA4_03470 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal NtRootA4_03470 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal NtRootA4_03490 PF00795 Carbon-nitrogen hydrolase NtRootA4_03500 PF00083 Sugar (and other) transporter NtRootA4_03550 PF00437 Type II/IV secretion system protein NtRootA4_03550 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NtRootA4_03560 PF00990 Diguanylate cyclase, GGDEF domain NtRootA4_03560 PF17151 Periplasmic sensor domain NtRootA4_03580 PF00563 EAL domain NtRootA4_03580 PF00990 Diguanylate cyclase, GGDEF domain NtRootA4_03580 PF03707 Bacterial signalling protein N terminal repeat NtRootA4_03590 PF00586 AIR synthase related protein, N-terminal domain NtRootA4_03590 PF02769 AIR synthase related protein, C-terminal domain NtRootA4_03590 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NtRootA4_03640 PF05067 Manganese containing catalase NtRootA4_03650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA4_03660 PF13088 BNR repeat-like domain NtRootA4_03660 PF00754 F5/8 type C domain NtRootA4_03660 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase NtRootA4_03670 PF06280 Fn3-like domain NtRootA4_03670 PF00746 LPXTG cell wall anchor motif NtRootA4_03670 PF02225 PA domain NtRootA4_03670 PF00082 Subtilase family NtRootA4_03710 PF01047 MarR family NtRootA4_03730 PF13936 Helix-turn-helix domain NtRootA4_03730 PF00665 Integrase core domain NtRootA4_03750 PF06305 Lipopolysaccharide assembly protein A domain NtRootA4_03770 PF07691 PA14 domain NtRootA4_03770 PF14310 Fibronectin type III-like domain NtRootA4_03770 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA4_03770 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootA4_03820 PF04314 Copper chaperone PCu(A)C NtRootA4_03830 PF04261 Dyp-type peroxidase family NtRootA4_03830 PF10518 TAT (twin-arginine translocation) pathway signal sequence NtRootA4_03840 PF00696 Amino acid kinase family NtRootA4_03840 PF01842 ACT domain NtRootA4_03840 PF13840 ACT domain NtRootA4_03880 PF02132 RecR protein NtRootA4_03880 PF13662 Toprim domain NtRootA4_03890 PF12169 DNA polymerase III subunits gamma and tau domain III NtRootA4_03900 PF01784 NIF3 (NGG1p interacting factor 3) NtRootA4_03920 PF00171 Aldehyde dehydrogenase family NtRootA4_03940 PF07690 Major Facilitator Superfamily NtRootA4_03950 PF01047 MarR family NtRootA4_04010 PF01551 Peptidase family M23 NtRootA4_04010 PF01464 Transglycosylase SLT domain NtRootA4_04010 PF10145 Phage-related minor tail protein NtRootA4_04020 PF00255 Glutathione peroxidase NtRootA4_04030 PF00149 Calcineurin-like phosphoesterase NtRootA4_04040 PF17101 Stealth protein CR1, conserved region 1 NtRootA4_04040 PF11380 Stealth protein CR2, conserved region 2 NtRootA4_04040 PF17102 Stealth protein CR3, conserved region 3 NtRootA4_04040 PF17103 Stealth protein CR4, conserved region 4 NtRootA4_04090 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_04110 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_04120 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_04130 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NtRootA4_04150 PF13439 Glycosyltransferase Family 4 NtRootA4_04180 PF18835 Beta helix repeat of Inulin fructotransferase NtRootA4_04180 PF05048 Periplasmic copper-binding protein (NosD) NtRootA4_04190 PF00294 pfkB family carbohydrate kinase NtRootA4_04200 PF08244 Glycosyl hydrolases family 32 C terminal NtRootA4_04200 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootA4_04210 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_04220 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_04230 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_04250 PF05048 Periplasmic copper-binding protein (NosD) NtRootA4_04250 PF18835 Beta helix repeat of Inulin fructotransferase NtRootA4_04260 PF00582 Universal stress protein family NtRootA4_04270 PF01970 Tripartite tricarboxylate transporter TctA family NtRootA4_04300 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NtRootA4_04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_04300 PF00989 PAS fold NtRootA4_04300 PF17203 Single cache domain 3 NtRootA4_04310 PF12431 Transcriptional regulator NtRootA4_04310 PF00072 Response regulator receiver domain NtRootA4_04320 PF03928 Haem-degrading NtRootA4_04330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_04330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_04340 PF07676 WD40-like Beta Propeller Repeat NtRootA4_04360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_04360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_04370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_04370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_04390 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_04400 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_04430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_04430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_04440 PF00480 ROK family NtRootA4_04440 PF01047 MarR family NtRootA4_04460 PF01274 Malate synthase NtRootA4_04470 PF00463 Isocitrate lyase family NtRootA4_04480 PF01381 Helix-turn-helix NtRootA4_04530 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_04550 PF08543 Phosphomethylpyrimidine kinase NtRootA4_04570 PF08521 Two-component sensor kinase N-terminal NtRootA4_04570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_04570 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_04580 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_04580 PF00072 Response regulator receiver domain NtRootA4_04590 PF00083 Sugar (and other) transporter NtRootA4_04610 PF08338 Domain of unknown function (DUF1731) NtRootA4_04610 PF01370 NAD dependent epimerase/dehydratase family NtRootA4_04620 PF17932 Tetracyclin repressor-like, C-terminal domain NtRootA4_04620 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_04650 PF01702 Queuine tRNA-ribosyltransferase NtRootA4_04720 PF00106 short chain dehydrogenase NtRootA4_04730 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA4_04730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA4_04730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA4_04790 PF00311 Phosphoenolpyruvate carboxylase NtRootA4_04810 PF09335 SNARE associated Golgi protein NtRootA4_04820 PF01661 Macro domain NtRootA4_04830 PF00849 RNA pseudouridylate synthase NtRootA4_04880 PF00155 Aminotransferase class I and II NtRootA4_04900 PF11606 Family 31 carbohydrate binding protein NtRootA4_04920 PF03552 Cellulose synthase NtRootA4_04920 PF00535 Glycosyl transferase family 2 NtRootA4_04920 PF07238 PilZ domain NtRootA4_04930 PF00722 Glycosyl hydrolases family 16 NtRootA4_04940 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NtRootA4_04940 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootA4_04950 PF00271 Helicase conserved C-terminal domain NtRootA4_04950 PF00270 DEAD/DEAH box helicase NtRootA4_04950 PF08494 DEAD/H associated NtRootA4_05000 PF02080 TrkA-C domain NtRootA4_05000 PF02254 TrkA-N domain NtRootA4_05000 PF00999 Sodium/hydrogen exchanger family NtRootA4_05030 PF00107 Zinc-binding dehydrogenase NtRootA4_05030 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_05050 PF13439 Glycosyltransferase Family 4 NtRootA4_05050 PF00534 Glycosyl transferases group 1 NtRootA4_05080 PF14437 MafB19-like deaminase NtRootA4_05130 PF13419 Haloacid dehalogenase-like hydrolase NtRootA4_05170 PF00672 HAMP domain NtRootA4_05170 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_05170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_05180 PF00072 Response regulator receiver domain NtRootA4_05180 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_05190 PF00072 Response regulator receiver domain NtRootA4_05190 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_05210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_05210 PF03466 LysR substrate binding domain NtRootA4_05220 PF00892 EamA-like transporter family NtRootA4_05240 PF08361 MAATS-type transcriptional repressor, C-terminal region NtRootA4_05240 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_05270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootA4_05270 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_05270 PF00403 Heavy-metal-associated domain NtRootA4_05280 PF00581 Rhodanese-like domain NtRootA4_05290 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase NtRootA4_05300 PF00480 ROK family NtRootA4_05310 PF00701 Dihydrodipicolinate synthetase family NtRootA4_05320 PF00005 ABC transporter NtRootA4_05320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA4_05330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA4_05330 PF00005 ABC transporter NtRootA4_05340 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_05350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA4_05370 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_05370 PF17932 Tetracyclin repressor-like, C-terminal domain NtRootA4_05380 PF07690 Major Facilitator Superfamily NtRootA4_05390 PF04199 Putative cyclase NtRootA4_05400 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA4_05410 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NtRootA4_05410 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NtRootA4_05420 PF00970 Oxidoreductase FAD-binding domain NtRootA4_05420 PF00042 Globin NtRootA4_05420 PF00175 Oxidoreductase NAD-binding domain NtRootA4_05470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootA4_05470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootA4_05470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootA4_05470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootA4_05480 PF00270 DEAD/DEAH box helicase NtRootA4_05480 PF00271 Helicase conserved C-terminal domain NtRootA4_05480 PF16124 RecQ zinc-binding NtRootA4_05480 PF09382 RQC domain NtRootA4_05480 PF00570 HRDC domain NtRootA4_05490 PF07690 Major Facilitator Superfamily NtRootA4_05500 PF00326 Prolyl oligopeptidase family NtRootA4_05500 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NtRootA4_05520 PF00324 Amino acid permease NtRootA4_05530 PF00149 Calcineurin-like phosphoesterase NtRootA4_05560 PF14765 Polyketide synthase dehydratase NtRootA4_05560 PF00550 Phosphopantetheine attachment site NtRootA4_05560 PF08659 KR domain NtRootA4_05560 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootA4_05560 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootA4_05560 PF16197 Ketoacyl-synthetase C-terminal extension NtRootA4_05560 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_05560 PF00698 Acyl transferase domain NtRootA4_05580 PF13722 5TM C-terminal transporter carbon starvation CstA NtRootA4_05580 PF02554 Carbon starvation protein CstA NtRootA4_05600 PF10759 Protein of unknown function (DUF2587) NtRootA4_05620 PF00248 Aldo/keto reductase family NtRootA4_05640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_05640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_05650 PF01261 Xylose isomerase-like TIM barrel NtRootA4_05660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_05660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_05670 PF02653 Branched-chain amino acid transport system / permease component NtRootA4_05680 PF00005 ABC transporter NtRootA4_05710 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_05740 PF01425 Amidase NtRootA4_05770 PF01546 Peptidase family M20/M25/M40 NtRootA4_05770 PF07687 Peptidase dimerisation domain NtRootA4_05780 PF02515 CoA-transferase family III NtRootA4_05790 PF01039 Carboxyl transferase domain NtRootA4_05830 PF00561 alpha/beta hydrolase fold NtRootA4_05840 PF12169 DNA polymerase III subunits gamma and tau domain III NtRootA4_05850 PF02223 Thymidylate kinase NtRootA4_05860 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootA4_05890 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA4_05900 PF01895 PhoU domain NtRootA4_05910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_05910 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_05920 PF00072 Response regulator receiver domain NtRootA4_05920 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_05940 PF02559 CarD-like/TRCF domain NtRootA4_05950 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NtRootA4_05960 PF02542 YgbB family NtRootA4_05980 PF09190 DALR domain NtRootA4_05980 PF01406 tRNA synthetases class I (C) catalytic domain NtRootA4_05990 PF00588 SpoU rRNA Methylase family NtRootA4_05990 PF08032 RNA 2'-O ribose methyltransferase substrate binding NtRootA4_06010 PF00795 Carbon-nitrogen hydrolase NtRootA4_06020 PF00128 Alpha amylase, catalytic domain NtRootA4_06020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NtRootA4_06050 PF00343 Carbohydrate phosphorylase NtRootA4_06050 PF11897 Protein of unknown function (DUF3417) NtRootA4_06060 PF11896 Domain of unknown function (DUF3416) NtRootA4_06070 PF00128 Alpha amylase, catalytic domain NtRootA4_06070 PF16657 Maltogenic Amylase, C-terminal domain NtRootA4_06080 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NtRootA4_06080 PF00128 Alpha amylase, catalytic domain NtRootA4_06080 PF02806 Alpha amylase, C-terminal all-beta domain NtRootA4_06110 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_06120 PF00128 Alpha amylase, catalytic domain NtRootA4_06140 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_06140 PF14785 Maltose transport system permease protein MalF P2 domain NtRootA4_06150 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_06160 PF00128 Alpha amylase, catalytic domain NtRootA4_06160 PF02903 Alpha amylase, N-terminal ig-like domain NtRootA4_06170 PF02913 FAD linked oxidases, C-terminal domain NtRootA4_06170 PF01565 FAD binding domain NtRootA4_06200 PF07969 Amidohydrolase family NtRootA4_06210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA4_06210 PF00005 ABC transporter NtRootA4_06220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA4_06220 PF00005 ABC transporter NtRootA4_06230 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_06240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA4_06250 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootA4_06250 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_06260 PF01979 Amidohydrolase family NtRootA4_06290 PF02838 Glycosyl hydrolase family 20, domain 2 NtRootA4_06290 PF00728 Glycosyl hydrolase family 20, catalytic domain NtRootA4_06300 PF17912 MalK OB fold domain NtRootA4_06300 PF00005 ABC transporter NtRootA4_06310 PF02358 Trehalose-phosphatase NtRootA4_06310 PF03633 Glycosyl hydrolase family 65, C-terminal domain NtRootA4_06310 PF03632 Glycosyl hydrolase family 65 central catalytic domain NtRootA4_06310 PF03636 Glycosyl hydrolase family 65, N-terminal domain NtRootA4_06320 PF00982 Glycosyltransferase family 20 NtRootA4_06340 PF02661 Fic/DOC family NtRootA4_06340 PF13784 Fic/DOC family N-terminal NtRootA4_06400 PF17871 AAA lid domain NtRootA4_06400 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA4_06400 PF07724 AAA domain (Cdc48 subfamily) NtRootA4_06400 PF02861 Clp amino terminal domain, pathogenicity island component NtRootA4_06400 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootA4_06420 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_06430 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_06440 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_06450 PF01547 Bacterial extracellular solute-binding protein NtRootA4_06470 PF08244 Glycosyl hydrolases family 32 C terminal NtRootA4_06470 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootA4_06510 PF09382 RQC domain NtRootA4_06510 PF00270 DEAD/DEAH box helicase NtRootA4_06510 PF00271 Helicase conserved C-terminal domain NtRootA4_06510 PF16124 RecQ zinc-binding NtRootA4_06510 PF00570 HRDC domain NtRootA4_06530 PF01256 Carbohydrate kinase NtRootA4_06550 PF13192 Thioredoxin domain NtRootA4_06550 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_06620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA4_06620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA4_06620 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA4_06630 PF01575 MaoC like domain NtRootA4_06640 PF00083 Sugar (and other) transporter NtRootA4_06650 PF13193 AMP-binding enzyme C-terminal domain NtRootA4_06650 PF00501 AMP-binding enzyme NtRootA4_06670 PF01266 FAD dependent oxidoreductase NtRootA4_06710 PF13520 Amino acid permease NtRootA4_06720 PF04371 Porphyromonas-type peptidyl-arginine deiminase NtRootA4_06730 PF00795 Carbon-nitrogen hydrolase NtRootA4_06740 PF00557 Metallopeptidase family M24 NtRootA4_06770 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_06790 PF07687 Peptidase dimerisation domain NtRootA4_06790 PF01546 Peptidase family M20/M25/M40 NtRootA4_06810 PF07690 Major Facilitator Superfamily NtRootA4_06820 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_06830 PF02347 Glycine cleavage system P-protein NtRootA4_06840 PF01571 Aminomethyltransferase folate-binding domain NtRootA4_06840 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA4_06850 PF01597 Glycine cleavage H-protein NtRootA4_06860 PF03315 Serine dehydratase beta chain NtRootA4_06860 PF03313 Serine dehydratase alpha chain NtRootA4_06870 PF01223 DNA/RNA non-specific endonuclease NtRootA4_06910 PF04954 Siderophore-interacting protein NtRootA4_06910 PF08021 Siderophore-interacting FAD-binding domain NtRootA4_06920 PF03167 Uracil DNA glycosylase superfamily NtRootA4_06950 PF00313 'Cold-shock' DNA-binding domain NtRootA4_06960 PF00118 TCP-1/cpn60 chaperonin family NtRootA4_06970 PF00075 RNase H NtRootA4_06990 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_06990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_06990 PF00672 HAMP domain NtRootA4_07000 PF00072 Response regulator receiver domain NtRootA4_07000 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_07010 PF01810 LysE type translocator NtRootA4_07020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_07020 PF03466 LysR substrate binding domain NtRootA4_07040 PF07732 Multicopper oxidase NtRootA4_07040 PF07731 Multicopper oxidase NtRootA4_07040 PF00394 Multicopper oxidase NtRootA4_07090 PF00313 'Cold-shock' DNA-binding domain NtRootA4_07110 PF05977 Transmembrane secretion effector NtRootA4_07120 PF00266 Aminotransferase class-V NtRootA4_07130 PF01325 Iron dependent repressor, N-terminal DNA binding domain NtRootA4_07130 PF02742 Iron dependent repressor, metal binding and dimerisation domain NtRootA4_07130 PF18357 Diphteria toxin repressor SH3 domain NtRootA4_07140 PF04225 Opacity-associated protein A LysM-like domain NtRootA4_07140 PF01551 Peptidase family M23 NtRootA4_07150 PF01476 LysM domain NtRootA4_07150 PF00877 NlpC/P60 family NtRootA4_07150 PF08239 Bacterial SH3 domain NtRootA4_07180 PF12804 MobA-like NTP transferase domain NtRootA4_07200 PF00384 Molybdopterin oxidoreductase NtRootA4_07200 PF01568 Molydopterin dinucleotide binding domain NtRootA4_07210 PF02634 FdhD/NarQ family NtRootA4_07250 PF00005 ABC transporter NtRootA4_07260 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_07270 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA4_07300 PF12848 ABC transporter NtRootA4_07300 PF16326 ABC transporter C-terminal domain NtRootA4_07300 PF00005 ABC transporter NtRootA4_07310 PF00005 ABC transporter NtRootA4_07310 PF00664 ABC transporter transmembrane region NtRootA4_07320 PF00293 NUDIX domain NtRootA4_07390 PF00459 Inositol monophosphatase family NtRootA4_07500 PF00196 Bacterial regulatory proteins, luxR family NtRootA4_07500 PF00072 Response regulator receiver domain NtRootA4_07510 PF13361 UvrD-like helicase C-terminal domain NtRootA4_07510 PF00580 UvrD/REP helicase N-terminal domain NtRootA4_07530 PF08442 ATP-grasp domain NtRootA4_07530 PF00549 CoA-ligase NtRootA4_07540 PF02629 CoA binding domain NtRootA4_07540 PF00549 CoA-ligase NtRootA4_07560 PF00294 pfkB family carbohydrate kinase NtRootA4_07580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA4_07580 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA4_07580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA4_07590 PF00171 Aldehyde dehydrogenase family NtRootA4_07600 PF01261 Xylose isomerase-like TIM barrel NtRootA4_07610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_07610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_07620 PF01261 Xylose isomerase-like TIM barrel NtRootA4_07630 PF04962 KduI/IolB family NtRootA4_07640 PF07702 UTRA domain NtRootA4_07640 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_07660 PF02653 Branched-chain amino acid transport system / permease component NtRootA4_07670 PF00005 ABC transporter NtRootA4_07680 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_07690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_07690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_07710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_07710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_07800 PF00474 Sodium:solute symporter family NtRootA4_07810 PF01381 Helix-turn-helix NtRootA4_07810 PF07883 Cupin domain NtRootA4_07850 PF00491 Arginase family NtRootA4_07860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA4_07860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA4_07860 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA4_07870 PF00083 Sugar (and other) transporter NtRootA4_07870 PF07690 Major Facilitator Superfamily NtRootA4_07880 PF00753 Metallo-beta-lactamase superfamily NtRootA4_07890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_07890 PF03466 LysR substrate binding domain NtRootA4_07910 PF07690 Major Facilitator Superfamily NtRootA4_07920 PF00664 ABC transporter transmembrane region NtRootA4_07920 PF00005 ABC transporter NtRootA4_07930 PF00664 ABC transporter transmembrane region NtRootA4_07930 PF00005 ABC transporter NtRootA4_07950 PF03932 CutC family NtRootA4_08000 PF07728 AAA domain (dynein-related subfamily) NtRootA4_08000 PF12102 Domain of unknown function (DUF3578) NtRootA4_08030 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_08030 PF00672 HAMP domain NtRootA4_08030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_08030 PF13426 PAS domain NtRootA4_08040 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_08040 PF00072 Response regulator receiver domain NtRootA4_08050 PF00037 4Fe-4S binding domain NtRootA4_08060 PF00171 Aldehyde dehydrogenase family NtRootA4_08080 PF00701 Dihydrodipicolinate synthetase family NtRootA4_08090 PF00378 Enoyl-CoA hydratase/isomerase NtRootA4_08100 PF02515 CoA-transferase family III NtRootA4_08110 PF01571 Aminomethyltransferase folate-binding domain NtRootA4_08110 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA4_08110 PF17806 Sarcosine oxidase A3 domain NtRootA4_08110 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_08120 PF00083 Sugar (and other) transporter NtRootA4_08130 PF01381 Helix-turn-helix NtRootA4_08130 PF07883 Cupin domain NtRootA4_08170 PF06968 Biotin and Thiamin Synthesis associated domain NtRootA4_08170 PF04055 Radical SAM superfamily NtRootA4_08190 PF05532 CsbD-like NtRootA4_08220 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_08220 PF13823 Alcohol dehydrogenase GroES-associated NtRootA4_08220 PF00107 Zinc-binding dehydrogenase NtRootA4_08250 PF13580 SIS domain NtRootA4_08270 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NtRootA4_08300 PF02733 Dak1 domain NtRootA4_08300 PF02734 DAK2 domain NtRootA4_08310 PF02502 Ribose/Galactose Isomerase NtRootA4_08320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootA4_08320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootA4_08340 PF07690 Major Facilitator Superfamily NtRootA4_08350 PF00121 Triosephosphate isomerase NtRootA4_08380 PF00571 CBS domain NtRootA4_08390 PF09371 Tex-like protein N-terminal domain NtRootA4_08390 PF00575 S1 RNA binding domain NtRootA4_08390 PF17674 HHH domain NtRootA4_08390 PF16921 Tex protein YqgF-like domain NtRootA4_08430 PF00962 Adenosine/AMP deaminase NtRootA4_08440 PF00128 Alpha amylase, catalytic domain NtRootA4_08440 PF02903 Alpha amylase, N-terminal ig-like domain NtRootA4_08440 PF00395 S-layer homology domain NtRootA4_08450 PF00708 Acylphosphatase NtRootA4_08460 PF01850 PIN domain NtRootA4_08480 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_08500 PF00294 pfkB family carbohydrate kinase NtRootA4_08510 PF07729 FCD domain NtRootA4_08510 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_08520 PF07690 Major Facilitator Superfamily NtRootA4_08530 PF01156 Inosine-uridine preferring nucleoside hydrolase NtRootA4_08550 PF08532 Beta-galactosidase trimerisation domain NtRootA4_08550 PF08533 Beta-galactosidase C-terminal domain NtRootA4_08550 PF02449 Beta-galactosidase NtRootA4_08560 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_08570 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_08580 PF01547 Bacterial extracellular solute-binding protein NtRootA4_08680 PF14310 Fibronectin type III-like domain NtRootA4_08680 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA4_08680 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootA4_08690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_08690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_08720 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_08730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_08730 PF03466 LysR substrate binding domain NtRootA4_08740 PF00795 Carbon-nitrogen hydrolase NtRootA4_08760 PF07690 Major Facilitator Superfamily NtRootA4_08770 PF03741 Integral membrane protein TerC family NtRootA4_08830 PF01022 Bacterial regulatory protein, arsR family NtRootA4_08860 PF01047 MarR family NtRootA4_08870 PF00892 EamA-like transporter family NtRootA4_08890 PF00144 Beta-lactamase NtRootA4_09000 PF00313 'Cold-shock' DNA-binding domain NtRootA4_09050 PF13520 Amino acid permease NtRootA4_09080 PF01047 MarR family NtRootA4_09120 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NtRootA4_09120 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NtRootA4_09120 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NtRootA4_09130 PF13439 Glycosyltransferase Family 4 NtRootA4_09130 PF00534 Glycosyl transferases group 1 NtRootA4_09140 PF13411 MerR HTH family regulatory protein NtRootA4_09150 PF00011 Hsp20/alpha crystallin family NtRootA4_09160 PF00226 DnaJ domain NtRootA4_09160 PF01556 DnaJ C terminal domain NtRootA4_09160 PF00684 DnaJ central domain NtRootA4_09200 PF00551 Formyl transferase NtRootA4_09210 PF07690 Major Facilitator Superfamily NtRootA4_09220 PF01380 SIS domain NtRootA4_09260 PF01808 AICARFT/IMPCHase bienzyme NtRootA4_09260 PF02142 MGS-like domain NtRootA4_09280 PF03971 Monomeric isocitrate dehydrogenase NtRootA4_09290 PF01266 FAD dependent oxidoreductase NtRootA4_09300 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_09310 PF00005 ABC transporter NtRootA4_09340 PF07702 UTRA domain NtRootA4_09340 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_09350 PF13419 Haloacid dehalogenase-like hydrolase NtRootA4_09370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_09370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_09380 PF00005 ABC transporter NtRootA4_09400 PF13407 Periplasmic binding protein domain NtRootA4_09410 PF02653 Branched-chain amino acid transport system / permease component NtRootA4_09420 PF00005 ABC transporter NtRootA4_09430 PF00480 ROK family NtRootA4_09430 PF01047 MarR family NtRootA4_09440 PF00795 Carbon-nitrogen hydrolase NtRootA4_09460 PF00842 Alanine racemase, C-terminal domain NtRootA4_09460 PF01168 Alanine racemase, N-terminal domain NtRootA4_09480 PF13520 Amino acid permease NtRootA4_09490 PF01593 Flavin containing amine oxidoreductase NtRootA4_09490 PF02027 RolB/RolC glucosidase family NtRootA4_09500 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootA4_09510 PF13649 Methyltransferase domain NtRootA4_09520 PF00551 Formyl transferase NtRootA4_09530 PF00464 Serine hydroxymethyltransferase NtRootA4_09540 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NtRootA4_09540 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NtRootA4_09550 PF00230 Major intrinsic protein NtRootA4_09560 PF00005 ABC transporter NtRootA4_09600 PF03372 Endonuclease/Exonuclease/phosphatase family NtRootA4_09610 PF00579 tRNA synthetases class I (W and Y) NtRootA4_09680 PF13085 2Fe-2S iron-sulfur cluster binding domain NtRootA4_09690 PF02910 Fumarate reductase flavoprotein C-term NtRootA4_09690 PF00890 FAD binding domain NtRootA4_09710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NtRootA4_09720 PF01050 Mannose-6-phosphate isomerase NtRootA4_09720 PF00483 Nucleotidyl transferase NtRootA4_09730 PF01546 Peptidase family M20/M25/M40 NtRootA4_09730 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootA4_09740 PF01047 MarR family NtRootA4_09750 PF02566 OsmC-like protein NtRootA4_09760 PF16884 N-terminal domain of oxidoreductase NtRootA4_09760 PF00107 Zinc-binding dehydrogenase NtRootA4_09770 PF02608 ABC transporter substrate-binding protein PnrA-like NtRootA4_09780 PF00005 ABC transporter NtRootA4_09790 PF02653 Branched-chain amino acid transport system / permease component NtRootA4_09800 PF02653 Branched-chain amino acid transport system / permease component NtRootA4_09810 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootA4_09820 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NtRootA4_09820 PF02885 Glycosyl transferase family, helical bundle domain NtRootA4_09820 PF00591 Glycosyl transferase family, a/b domain NtRootA4_09840 PF09335 SNARE associated Golgi protein NtRootA4_09850 PF00962 Adenosine/AMP deaminase NtRootA4_09860 PF03819 MazG nucleotide pyrophosphohydrolase domain NtRootA4_09870 PF03952 Enolase, N-terminal domain NtRootA4_09870 PF00113 Enolase, C-terminal TIM barrel domain NtRootA4_09900 PF02541 Ppx/GppA phosphatase family NtRootA4_09910 PF00082 Subtilase family NtRootA4_09920 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_09930 PF00583 Acetyltransferase (GNAT) family NtRootA4_09960 PF00672 HAMP domain NtRootA4_09960 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_09960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_09970 PF00072 Response regulator receiver domain NtRootA4_09970 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_10000 PF00005 ABC transporter NtRootA4_10000 PF02687 FtsX-like permease family NtRootA4_10000 PF12704 MacB-like periplasmic core domain NtRootA4_10010 PF02687 FtsX-like permease family NtRootA4_10010 PF12704 MacB-like periplasmic core domain NtRootA4_10010 PF00005 ABC transporter NtRootA4_10040 PF00005 ABC transporter NtRootA4_10050 PF00005 ABC transporter NtRootA4_10050 PF12399 Branched-chain amino acid ATP-binding cassette transporter NtRootA4_10060 PF02653 Branched-chain amino acid transport system / permease component NtRootA4_10060 PF11862 Domain of unknown function (DUF3382) NtRootA4_10070 PF02653 Branched-chain amino acid transport system / permease component NtRootA4_10090 PF02803 Thiolase, C-terminal domain NtRootA4_10090 PF00108 Thiolase, N-terminal domain NtRootA4_10100 PF00288 GHMP kinases N terminal domain NtRootA4_10100 PF08544 GHMP kinases C terminal NtRootA4_10100 PF10509 Galactokinase galactose-binding signature NtRootA4_10110 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NtRootA4_10110 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NtRootA4_10120 PF01263 Aldose 1-epimerase NtRootA4_10130 PF01594 AI-2E family transporter NtRootA4_10140 PF13291 ACT domain NtRootA4_10140 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA4_10150 PF01694 Rhomboid family NtRootA4_10160 PF01272 Transcription elongation factor, GreA/GreB, C-term NtRootA4_10160 PF03449 Transcription elongation factor, N-terminal NtRootA4_10180 PF02585 GlcNAc-PI de-N-acetylase NtRootA4_10200 PF03006 Haemolysin-III related NtRootA4_10210 PF01255 Putative undecaprenyl diphosphate synthase NtRootA4_10220 PF13638 PIN domain NtRootA4_10220 PF02562 PhoH-like protein NtRootA4_10270 PF07690 Major Facilitator Superfamily NtRootA4_10290 PF10415 Fumarase C C-terminus NtRootA4_10290 PF00206 Lyase NtRootA4_10300 PF00484 Carbonic anhydrase NtRootA4_10320 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NtRootA4_10340 PF01238 Phosphomannose isomerase type I NtRootA4_10360 PF00731 AIR carboxylase NtRootA4_10370 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NtRootA4_10370 PF02222 ATP-grasp domain NtRootA4_10400 PF02467 Transcription factor WhiB NtRootA4_10410 PF00535 Glycosyl transferase family 2 NtRootA4_10410 PF00534 Glycosyl transferases group 1 NtRootA4_10460 PF05221 S-adenosyl-L-homocysteine hydrolase NtRootA4_10460 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NtRootA4_10470 PF17964 Bacterial Ig domain NtRootA4_10470 PF03734 L,D-transpeptidase catalytic domain NtRootA4_10480 PF00805 Pentapeptide repeats (8 copies) NtRootA4_10520 PF00501 AMP-binding enzyme NtRootA4_10530 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase NtRootA4_10530 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NtRootA4_10540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NtRootA4_10550 PF00171 Aldehyde dehydrogenase family NtRootA4_10580 PF17863 AAA lid domain NtRootA4_10580 PF07726 ATPase family associated with various cellular activities (AAA) NtRootA4_10590 PF01026 TatD related DNase NtRootA4_10600 PF07501 G5 domain NtRootA4_10600 PF03990 G5-linked-Ubiquitin-like domain NtRootA4_10600 PF06737 Transglycosylase-like domain NtRootA4_10610 PF00398 Ribosomal RNA adenine dimethylase NtRootA4_10620 PF00288 GHMP kinases N terminal domain NtRootA4_10620 PF08544 GHMP kinases C terminal NtRootA4_10630 PF16326 ABC transporter C-terminal domain NtRootA4_10630 PF00005 ABC transporter NtRootA4_10630 PF12848 ABC transporter NtRootA4_10650 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_10660 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootA4_10660 PF12804 MobA-like NTP transferase domain NtRootA4_10670 PF14572 Phosphoribosyl synthetase-associated domain NtRootA4_10670 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NtRootA4_10680 PF14693 Ribosomal protein TL5, C-terminal domain NtRootA4_10680 PF01386 Ribosomal L25p family NtRootA4_10690 PF01195 Peptidyl-tRNA hydrolase NtRootA4_10710 PF00072 Response regulator receiver domain NtRootA4_10710 PF00196 Bacterial regulatory proteins, luxR family NtRootA4_10730 PF00266 Aminotransferase class-V NtRootA4_10740 PF01592 NifU-like N terminal domain NtRootA4_10750 PF06965 Na+/H+ antiporter 1 NtRootA4_10780 PF11066 Protein of unknown function (DUF2867) NtRootA4_10780 PF13460 NAD(P)H-binding NtRootA4_10790 PF00270 DEAD/DEAH box helicase NtRootA4_10790 PF17757 UvrB interaction domain NtRootA4_10790 PF03461 TRCF domain NtRootA4_10790 PF00271 Helicase conserved C-terminal domain NtRootA4_10790 PF02559 CarD-like/TRCF domain NtRootA4_10800 PF04307 LexA-binding, inner membrane-associated putative hydrolase NtRootA4_10820 PF01791 DeoC/LacD family aldolase NtRootA4_10840 PF18113 Rubredoxin binding C-terminal domain NtRootA4_10840 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_10910 PF05199 GMC oxidoreductase NtRootA4_10960 PF00717 Peptidase S24-like NtRootA4_10970 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_10980 PF00083 Sugar (and other) transporter NtRootA4_11000 PF13438 Domain of unknown function (DUF4113) NtRootA4_11000 PF00817 impB/mucB/samB family NtRootA4_11000 PF11799 impB/mucB/samB family C-terminal domain NtRootA4_11000 PF11798 IMS family HHH motif NtRootA4_11020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NtRootA4_11020 PF02602 Uroporphyrinogen-III synthase HemD NtRootA4_11030 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_11030 PF18267 Rubredoxin NAD+ reductase C-terminal domain NtRootA4_11030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NtRootA4_11030 PF04324 BFD-like [2Fe-2S] binding domain NtRootA4_11030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NtRootA4_11050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootA4_11050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootA4_11050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootA4_11050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootA4_11060 PF08244 Glycosyl hydrolases family 32 C terminal NtRootA4_11060 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootA4_11070 PF02435 Levansucrase/Invertase NtRootA4_11080 PF01048 Phosphorylase superfamily NtRootA4_11090 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_11090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootA4_11110 PF14759 Reductase C-terminal NtRootA4_11110 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_11120 PF01568 Molydopterin dinucleotide binding domain NtRootA4_11120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NtRootA4_11120 PF00384 Molybdopterin oxidoreductase NtRootA4_11130 PF07690 Major Facilitator Superfamily NtRootA4_11140 PF07690 Major Facilitator Superfamily NtRootA4_11140 PF00083 Sugar (and other) transporter NtRootA4_11150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootA4_11150 PF00289 Biotin carboxylase, N-terminal domain NtRootA4_11150 PF02785 Biotin carboxylase C-terminal domain NtRootA4_11150 PF00364 Biotin-requiring enzyme NtRootA4_11160 PF02545 Maf-like protein NtRootA4_11170 PF03176 MMPL family NtRootA4_11180 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_11190 PF01906 Putative heavy-metal-binding NtRootA4_11200 PF00375 Sodium:dicarboxylate symporter family NtRootA4_11230 PF01039 Carboxyl transferase domain NtRootA4_11250 PF02237 Biotin protein ligase C terminal domain NtRootA4_11250 PF08279 HTH domain NtRootA4_11250 PF03099 Biotin/lipoate A/B protein ligase family NtRootA4_11270 PF16701 Adenylate cyclase regulatory domain NtRootA4_11270 PF00211 Adenylate and Guanylate cyclase catalytic domain NtRootA4_11300 PF07726 ATPase family associated with various cellular activities (AAA) NtRootA4_11300 PF17863 AAA lid domain NtRootA4_11360 PF13191 AAA ATPase domain NtRootA4_11360 PF00069 Protein kinase domain NtRootA4_11380 PF01580 FtsK/SpoIIIE family NtRootA4_11380 PF12538 DNA transporter NtRootA4_11390 PF00533 BRCA1 C Terminus (BRCT) domain NtRootA4_11390 PF01653 NAD-dependent DNA ligase adenylation domain NtRootA4_11390 PF03120 NAD-dependent DNA ligase OB-fold domain NtRootA4_11390 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NtRootA4_11390 PF12826 Helix-hairpin-helix motif NtRootA4_11400 PF00459 Inositol monophosphatase family NtRootA4_11420 PF00296 Luciferase-like monooxygenase NtRootA4_11460 PF00072 Response regulator receiver domain NtRootA4_11480 PF03600 Citrate transporter NtRootA4_11490 PF03816 Cell envelope-related transcriptional attenuator domain NtRootA4_11510 PF02686 Glu-tRNAGln amidotransferase C subunit NtRootA4_11520 PF01425 Amidase NtRootA4_11530 PF02934 GatB/GatE catalytic domain NtRootA4_11530 PF02637 GatB domain NtRootA4_11550 PF03781 Sulfatase-modifying factor enzyme 1 NtRootA4_11560 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_11570 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_11590 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_11610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_11610 PF03466 LysR substrate binding domain NtRootA4_11620 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_11620 PF00107 Zinc-binding dehydrogenase NtRootA4_11630 PF00155 Aminotransferase class I and II NtRootA4_11650 PF01979 Amidohydrolase family NtRootA4_11660 PF17974 Galactose-binding domain-like NtRootA4_11660 PF17451 Glycosyl hydrolase 101 beta sandwich domain NtRootA4_11660 PF12905 Endo-alpha-N-acetylgalactosaminidase NtRootA4_11660 PF08305 NPCBM/NEW2 domain NtRootA4_11660 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase NtRootA4_11660 PF18080 Galactose mutarotase-like fold domain NtRootA4_11670 PF01380 SIS domain NtRootA4_11690 PF00294 pfkB family carbohydrate kinase NtRootA4_11700 PF01116 Fructose-bisphosphate aldolase class-II NtRootA4_11710 PF00455 DeoR C terminal sensor domain NtRootA4_11710 PF08220 DeoR-like helix-turn-helix domain NtRootA4_11720 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA4_11750 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootA4_11760 PF00561 alpha/beta hydrolase fold NtRootA4_11830 PF03129 Anticodon binding domain NtRootA4_11830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootA4_11850 PF08031 Berberine and berberine like NtRootA4_11850 PF01565 FAD binding domain NtRootA4_11870 PF03649 Uncharacterised protein family (UPF0014) NtRootA4_11880 PF00672 HAMP domain NtRootA4_11880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_11880 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_11890 PF00072 Response regulator receiver domain NtRootA4_11890 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_11900 PF09335 SNARE associated Golgi protein NtRootA4_11910 PF01569 PAP2 superfamily NtRootA4_11930 PF00005 ABC transporter NtRootA4_11950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_11950 PF07730 Histidine kinase NtRootA4_11960 PF00196 Bacterial regulatory proteins, luxR family NtRootA4_11960 PF00072 Response regulator receiver domain NtRootA4_11970 PF01207 Dihydrouridine synthase (Dus) NtRootA4_11980 PF13286 Phosphohydrolase-associated domain NtRootA4_11980 PF01966 HD domain NtRootA4_11990 PF01807 CHC2 zinc finger NtRootA4_11990 PF10410 DnaB-helicase binding domain of primase NtRootA4_11990 PF08275 DNA primase catalytic core, N-terminal domain NtRootA4_11990 PF08278 DNA primase DnaG DnaB-binding NtRootA4_11990 PF13662 Toprim domain NtRootA4_12010 PF00756 Putative esterase NtRootA4_12020 PF09924 Uncharacterised conserved protein (DUF2156) NtRootA4_12040 PF07690 Major Facilitator Superfamily NtRootA4_12060 PF01066 CDP-alcohol phosphatidyltransferase NtRootA4_12080 PF08323 Starch synthase catalytic domain NtRootA4_12090 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA4_12090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA4_12090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA4_12100 PF01551 Peptidase family M23 NtRootA4_12110 PF00318 Ribosomal protein S2 NtRootA4_12120 PF00889 Elongation factor TS NtRootA4_12130 PF00696 Amino acid kinase family NtRootA4_12140 PF01765 Ribosome recycling factor NtRootA4_12180 PF00474 Sodium:solute symporter family NtRootA4_12200 PF04397 LytTr DNA-binding domain NtRootA4_12200 PF00072 Response regulator receiver domain NtRootA4_12210 PF07694 5TMR of 5TMR-LYT NtRootA4_12210 PF06580 Histidine kinase NtRootA4_12230 PF00474 Sodium:solute symporter family NtRootA4_12240 PF02811 PHP domain NtRootA4_12240 PF14716 Helix-hairpin-helix domain NtRootA4_12240 PF14791 DNA polymerase beta thumb NtRootA4_12280 PF01037 Lrp/AsnC ligand binding domain NtRootA4_12290 PF00676 Dehydrogenase E1 component NtRootA4_12300 PF02779 Transketolase, pyrimidine binding domain NtRootA4_12300 PF02780 Transketolase, C-terminal domain NtRootA4_12310 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootA4_12310 PF00364 Biotin-requiring enzyme NtRootA4_12310 PF02817 e3 binding domain NtRootA4_12320 PF16363 GDP-mannose 4,6 dehydratase NtRootA4_12350 PF01039 Carboxyl transferase domain NtRootA4_12360 PF00289 Biotin carboxylase, N-terminal domain NtRootA4_12360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootA4_12360 PF02785 Biotin carboxylase C-terminal domain NtRootA4_12360 PF00364 Biotin-requiring enzyme NtRootA4_12370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA4_12370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA4_12370 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA4_12380 PF01144 Coenzyme A transferase NtRootA4_12390 PF01144 Coenzyme A transferase NtRootA4_12410 PF03328 HpcH/HpaI aldolase/citrate lyase family NtRootA4_12420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_12420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_12450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_12450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_12460 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_12470 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_12480 PF01547 Bacterial extracellular solute-binding protein NtRootA4_12490 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_12510 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NtRootA4_12510 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NtRootA4_12510 PF13288 DXP reductoisomerase C-terminal domain NtRootA4_12520 PF02163 Peptidase family M50 NtRootA4_12520 PF17820 PDZ domain NtRootA4_12540 PF04551 GcpE protein NtRootA4_12570 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_12590 PF00005 ABC transporter NtRootA4_12610 PF03129 Anticodon binding domain NtRootA4_12610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootA4_12610 PF04073 Aminoacyl-tRNA editing domain NtRootA4_12620 PF01925 Sulfite exporter TauE/SafE NtRootA4_12630 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NtRootA4_12660 PF17384 RimP C-terminal SH3 domain NtRootA4_12660 PF02576 RimP N-terminal domain NtRootA4_12670 PF08529 NusA N-terminal domain NtRootA4_12670 PF13184 NusA-like KH domain NtRootA4_12690 PF04760 Translation initiation factor IF-2, N-terminal region NtRootA4_12690 PF11987 Translation-initiation factor 2 NtRootA4_12690 PF00009 Elongation factor Tu GTP binding domain NtRootA4_12700 PF02033 Ribosome-binding factor A NtRootA4_12710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootA4_12720 PF00155 Aminotransferase class I and II NtRootA4_12730 PF09142 tRNA Pseudouridine synthase II, C terminal NtRootA4_12730 PF16198 tRNA pseudouridylate synthase B C-terminal domain NtRootA4_12730 PF01509 TruB family pseudouridylate synthase (N terminal domain) NtRootA4_12760 PF06574 FAD synthetase NtRootA4_12760 PF01687 Riboflavin kinase NtRootA4_12770 PF00312 Ribosomal protein S15 NtRootA4_12780 PF00013 KH domain NtRootA4_12780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NtRootA4_12780 PF01138 3' exoribonuclease family, domain 1 NtRootA4_12780 PF00575 S1 RNA binding domain NtRootA4_12790 PF00675 Insulinase (Peptidase family M16) NtRootA4_12790 PF05193 Peptidase M16 inactive domain NtRootA4_12820 PF04055 Radical SAM superfamily NtRootA4_12820 PF06463 Molybdenum Cofactor Synthesis C NtRootA4_12830 PF00072 Response regulator receiver domain NtRootA4_12830 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_12840 PF00672 HAMP domain NtRootA4_12840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_12840 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_12860 PF00994 Probable molybdopterin binding domain NtRootA4_12860 PF03454 MoeA C-terminal region (domain IV) NtRootA4_12860 PF03453 MoeA N-terminal region (domain I and II) NtRootA4_12870 PF01967 MoaC family NtRootA4_12880 PF00994 Probable molybdopterin binding domain NtRootA4_12890 PF02391 MoaE protein NtRootA4_12900 PF01113 Dihydrodipicolinate reductase, N-terminus NtRootA4_12900 PF05173 Dihydrodipicolinate reductase, C-terminus NtRootA4_12940 PF00701 Dihydrodipicolinate synthetase family NtRootA4_12950 PF12706 Beta-lactamase superfamily domain NtRootA4_12950 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NtRootA4_12950 PF17770 Ribonuclease J C-terminal domain NtRootA4_12960 PF17854 FtsK alpha domain NtRootA4_12960 PF09397 Ftsk gamma domain NtRootA4_12960 PF01580 FtsK/SpoIIIE family NtRootA4_12970 PF01066 CDP-alcohol phosphatidyltransferase NtRootA4_12980 PF02464 Competence-damaged protein NtRootA4_12980 PF18146 Damage-inducible protein CinA KH domain NtRootA4_12980 PF00994 Probable molybdopterin binding domain NtRootA4_13020 PF00154 recA bacterial DNA recombination protein NtRootA4_13030 PF02631 RecX family NtRootA4_13040 PF04055 Radical SAM superfamily NtRootA4_13040 PF01938 TRAM domain NtRootA4_13040 PF00919 Uncharacterized protein family UPF0004 NtRootA4_13060 PF01678 Diaminopimelate epimerase NtRootA4_13070 PF05175 Methyltransferase small domain NtRootA4_13080 PF16360 GTP-binding GTPase Middle Region NtRootA4_13080 PF13167 GTP-binding GTPase N-terminal NtRootA4_13080 PF01926 50S ribosome-binding GTPase NtRootA4_13090 PF13307 Helicase C-terminal domain NtRootA4_13100 PF01726 LexA DNA binding domain NtRootA4_13100 PF00717 Peptidase S24-like NtRootA4_13110 PF01476 LysM domain NtRootA4_13130 PF00155 Aminotransferase class I and II NtRootA4_13140 PF00475 Imidazoleglycerol-phosphate dehydratase NtRootA4_13150 PF00117 Glutamine amidotransferase class-I NtRootA4_13170 PF00977 Histidine biosynthesis protein NtRootA4_13220 PF00707 Translation initiation factor IF-3, C-terminal domain NtRootA4_13220 PF05198 Translation initiation factor IF-3, N-terminal domain NtRootA4_13230 PF01632 Ribosomal protein L35 NtRootA4_13240 PF00453 Ribosomal protein L20 NtRootA4_13250 PF08032 RNA 2'-O ribose methyltransferase substrate binding NtRootA4_13250 PF00588 SpoU rRNA Methylase family NtRootA4_13260 PF16916 Dimerisation domain of Zinc Transporter NtRootA4_13260 PF01545 Cation efflux family NtRootA4_13270 PF07690 Major Facilitator Superfamily NtRootA4_13290 PF00293 NUDIX domain NtRootA4_13300 PF04055 Radical SAM superfamily NtRootA4_13310 PF01470 Pyroglutamyl peptidase NtRootA4_13350 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NtRootA4_13350 PF01409 tRNA synthetases class II core domain (F) NtRootA4_13360 PF03483 B3/4 domain NtRootA4_13360 PF01588 Putative tRNA binding domain NtRootA4_13360 PF03147 Ferredoxin-fold anticodon binding domain NtRootA4_13360 PF03484 tRNA synthetase B5 domain NtRootA4_13360 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NtRootA4_13370 PF00089 Trypsin NtRootA4_13410 PF00550 Phosphopantetheine attachment site NtRootA4_13410 PF00501 AMP-binding enzyme NtRootA4_13410 PF13193 AMP-binding enzyme C-terminal domain NtRootA4_13410 PF07993 Male sterility protein NtRootA4_13410 PF00668 Condensation domain NtRootA4_13420 PF00107 Zinc-binding dehydrogenase NtRootA4_13420 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_13440 PF02774 Semialdehyde dehydrogenase, dimerisation domain NtRootA4_13440 PF01118 Semialdehyde dehydrogenase, NAD binding domain NtRootA4_13450 PF01960 ArgJ family NtRootA4_13460 PF00696 Amino acid kinase family NtRootA4_13470 PF00202 Aminotransferase class-III NtRootA4_13480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NtRootA4_13480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NtRootA4_13490 PF01316 Arginine repressor, DNA binding domain NtRootA4_13490 PF02863 Arginine repressor, C-terminal domain NtRootA4_13500 PF00764 Arginosuccinate synthase NtRootA4_13510 PF14698 Argininosuccinate lyase C-terminal NtRootA4_13510 PF00206 Lyase NtRootA4_13530 PF02805 Metal binding domain of Ada NtRootA4_13530 PF00730 HhH-GPD superfamily base excision DNA repair protein NtRootA4_13530 PF12833 Helix-turn-helix domain NtRootA4_13530 PF06029 AlkA N-terminal domain NtRootA4_13540 PF02245 Methylpurine-DNA glycosylase (MPG) NtRootA4_13560 PF00579 tRNA synthetases class I (W and Y) NtRootA4_13600 PF13419 Haloacid dehalogenase-like hydrolase NtRootA4_13620 PF01728 FtsJ-like methyltransferase NtRootA4_13620 PF01479 S4 domain NtRootA4_13630 PF01513 ATP-NAD kinase NtRootA4_13640 PF02463 RecF/RecN/SMC N terminal domain NtRootA4_13650 PF06418 CTP synthase N-terminus NtRootA4_13650 PF00117 Glutamine amidotransferase class-I NtRootA4_13670 PF02899 Phage integrase, N-terminal SAM-like domain NtRootA4_13670 PF00589 Phage integrase family NtRootA4_13710 PF00285 Citrate synthase, C-terminal domain NtRootA4_13730 PF03972 MmgE/PrpD family NtRootA4_13740 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_13740 PF07729 FCD domain NtRootA4_13750 PF04703 FaeA-like protein NtRootA4_13750 PF00072 Response regulator receiver domain NtRootA4_13760 PF17203 Single cache domain 3 NtRootA4_13760 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NtRootA4_13760 PF00989 PAS fold NtRootA4_13760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_13770 PF00375 Sodium:dicarboxylate symporter family NtRootA4_13780 PF13614 AAA domain NtRootA4_13790 PF02616 Segregation and condensation protein ScpA NtRootA4_13800 PF04079 Segregation and condensation complex subunit ScpB NtRootA4_13810 PF01479 S4 domain NtRootA4_13810 PF00849 RNA pseudouridylate synthase NtRootA4_13820 PF02153 Prephenate dehydrogenase NtRootA4_13830 PF02224 Cytidylate kinase NtRootA4_13850 PF01926 50S ribosome-binding GTPase NtRootA4_13850 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NtRootA4_13860 PF01047 MarR family NtRootA4_13870 PF07690 Major Facilitator Superfamily NtRootA4_13890 PF01597 Glycine cleavage H-protein NtRootA4_13900 PF00498 FHA domain NtRootA4_13910 PF00376 MerR family regulatory protein NtRootA4_13920 PF02577 Bifunctional nuclease NtRootA4_13930 PF13411 MerR HTH family regulatory protein NtRootA4_13940 PF13614 AAA domain NtRootA4_13950 PF00364 Biotin-requiring enzyme NtRootA4_13950 PF00289 Biotin carboxylase, N-terminal domain NtRootA4_13950 PF02785 Biotin carboxylase C-terminal domain NtRootA4_13950 PF02436 Conserved carboxylase domain NtRootA4_13950 PF00682 HMGL-like NtRootA4_13950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootA4_13960 PF00501 AMP-binding enzyme NtRootA4_13970 PF00480 ROK family NtRootA4_13990 PF12146 Serine aminopeptidase, S33 NtRootA4_14020 PF01474 Class-II DAHP synthetase family NtRootA4_14030 PF03793 PASTA domain NtRootA4_14030 PF00069 Protein kinase domain NtRootA4_14040 PF05257 CHAP domain NtRootA4_14040 PF01476 LysM domain NtRootA4_14070 PF00348 Polyprenyl synthetase NtRootA4_14100 PF11799 impB/mucB/samB family C-terminal domain NtRootA4_14100 PF00817 impB/mucB/samB family NtRootA4_14120 PF02381 MraZ protein, putative antitoxin-like NtRootA4_14130 PF01795 MraW methylase family NtRootA4_14150 PF00905 Penicillin binding protein transpeptidase domain NtRootA4_14150 PF03717 Penicillin-binding Protein dimerisation domain NtRootA4_14160 PF02875 Mur ligase family, glutamate ligase domain NtRootA4_14160 PF01225 Mur ligase family, catalytic domain NtRootA4_14160 PF08245 Mur ligase middle domain NtRootA4_14170 PF08245 Mur ligase middle domain NtRootA4_14170 PF02875 Mur ligase family, glutamate ligase domain NtRootA4_14170 PF01225 Mur ligase family, catalytic domain NtRootA4_14180 PF00953 Glycosyl transferase family 4 NtRootA4_14190 PF08245 Mur ligase middle domain NtRootA4_14190 PF02875 Mur ligase family, glutamate ligase domain NtRootA4_14200 PF01098 Cell cycle protein NtRootA4_14210 PF03033 Glycosyltransferase family 28 N-terminal domain NtRootA4_14210 PF04101 Glycosyltransferase family 28 C-terminal domain NtRootA4_14220 PF08245 Mur ligase middle domain NtRootA4_14220 PF01225 Mur ligase family, catalytic domain NtRootA4_14220 PF02875 Mur ligase family, glutamate ligase domain NtRootA4_14240 PF00091 Tubulin/FtsZ family, GTPase domain NtRootA4_14240 PF12327 FtsZ family, C-terminal domain NtRootA4_14250 PF02578 Multi-copper polyphenol oxidoreductase laccase NtRootA4_14260 PF01168 Alanine racemase, N-terminal domain NtRootA4_14270 PF04472 Cell division protein SepF NtRootA4_14290 PF05103 DivIVA protein NtRootA4_14300 PF01252 Signal peptidase (SPase) II NtRootA4_14310 PF00849 RNA pseudouridylate synthase NtRootA4_14320 PF07733 Bacterial DNA polymerase III alpha NTPase domain NtRootA4_14320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NtRootA4_14320 PF14579 Helix-hairpin-helix motif NtRootA4_14320 PF02811 PHP domain NtRootA4_14350 PF00815 Histidinol dehydrogenase NtRootA4_14360 PF03477 ATP cone domain NtRootA4_14380 PF00480 ROK family NtRootA4_14390 PF00557 Metallopeptidase family M24 NtRootA4_14410 PF02548 Ketopantoate hydroxymethyltransferase NtRootA4_14420 PF03951 Glutamine synthetase, beta-Grasp domain NtRootA4_14420 PF00120 Glutamine synthetase, catalytic domain NtRootA4_14430 PF08335 GlnD PII-uridylyltransferase NtRootA4_14430 PF03710 Glutamate-ammonia ligase adenylyltransferase NtRootA4_14440 PF00884 Sulfatase NtRootA4_14440 PF16347 Domain of unknown function (DUF4976) NtRootA4_14470 PF03951 Glutamine synthetase, beta-Grasp domain NtRootA4_14470 PF00120 Glutamine synthetase, catalytic domain NtRootA4_14500 PF04055 Radical SAM superfamily NtRootA4_14500 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NtRootA4_14510 PF03099 Biotin/lipoate A/B protein ligase family NtRootA4_14520 PF00069 Protein kinase domain NtRootA4_14520 PF13360 PQQ-like domain NtRootA4_14540 PF14684 Tricorn protease C1 domain NtRootA4_14540 PF03572 Peptidase family S41 NtRootA4_14540 PF07676 WD40-like Beta Propeller Repeat NtRootA4_14540 PF14685 Tricorn protease PDZ domain NtRootA4_14550 PF02566 OsmC-like protein NtRootA4_14580 PF00364 Biotin-requiring enzyme NtRootA4_14580 PF02817 e3 binding domain NtRootA4_14580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootA4_14590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootA4_14590 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_14600 PF00883 Cytosol aminopeptidase family, catalytic domain NtRootA4_14600 PF02789 Cytosol aminopeptidase family, N-terminal domain NtRootA4_14640 PF00140 Sigma-70 factor, region 1.2 NtRootA4_14640 PF04542 Sigma-70 region 2 NtRootA4_14640 PF04539 Sigma-70 region 3 NtRootA4_14640 PF04545 Sigma-70, region 4 NtRootA4_14660 PF01751 Toprim domain NtRootA4_14660 PF00204 DNA gyrase B NtRootA4_14660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_14660 PF00986 DNA gyrase B subunit, carboxyl terminus NtRootA4_14690 PF03965 Penicillinase repressor NtRootA4_14700 PF01654 Cytochrome bd terminal oxidase subunit I NtRootA4_14710 PF02322 Cytochrome bd terminal oxidase subunit II NtRootA4_14720 PF00664 ABC transporter transmembrane region NtRootA4_14720 PF00005 ABC transporter NtRootA4_14760 PF00521 DNA gyrase/topoisomerase IV, subunit A NtRootA4_14760 PF03989 DNA gyrase C-terminal domain, beta-propeller NtRootA4_14770 PF13607 Succinyl-CoA ligase like flavodoxin domain NtRootA4_14770 PF13380 CoA binding domain NtRootA4_14770 PF00583 Acetyltransferase (GNAT) family NtRootA4_14800 PF00265 Thymidine kinase NtRootA4_14810 PF11268 Protein of unknown function (DUF3071) NtRootA4_14850 PF00692 dUTPase NtRootA4_14890 PF02254 TrkA-N domain NtRootA4_14890 PF02080 TrkA-C domain NtRootA4_14900 PF02080 TrkA-C domain NtRootA4_14900 PF02254 TrkA-N domain NtRootA4_14920 PF13520 Amino acid permease NtRootA4_14930 PF01938 TRAM domain NtRootA4_14930 PF05958 tRNA (Uracil-5-)-methyltransferase NtRootA4_14940 PF00694 Aconitase C-terminal domain NtRootA4_14940 PF00330 Aconitase family (aconitate hydratase) NtRootA4_14950 PF02780 Transketolase, C-terminal domain NtRootA4_14950 PF02779 Transketolase, pyrimidine binding domain NtRootA4_14950 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NtRootA4_14990 PF00248 Aldo/keto reductase family NtRootA4_15000 PF00378 Enoyl-CoA hydratase/isomerase NtRootA4_15000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootA4_15000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootA4_15010 PF00108 Thiolase, N-terminal domain NtRootA4_15010 PF02803 Thiolase, C-terminal domain NtRootA4_15020 PF01612 3'-5' exonuclease NtRootA4_15020 PF00570 HRDC domain NtRootA4_15040 PF01212 Beta-eliminating lyase NtRootA4_15070 PF01641 SelR domain NtRootA4_15100 PF04073 Aminoacyl-tRNA editing domain NtRootA4_15110 PF02657 Fe-S metabolism associated domain NtRootA4_15120 PF00581 Rhodanese-like domain NtRootA4_15130 PF11638 DnaA N-terminal domain NtRootA4_15130 PF00308 Bacterial dnaA protein NtRootA4_15130 PF08299 Bacterial dnaA protein helix-turn-helix NtRootA4_15140 PF03594 Benzoate membrane transport protein NtRootA4_15160 PF13520 Amino acid permease NtRootA4_15180 PF01327 Polypeptide deformylase NtRootA4_15190 PF02911 Formyl transferase, C-terminal domain NtRootA4_15190 PF00551 Formyl transferase NtRootA4_15200 PF01189 16S rRNA methyltransferase RsmB/F NtRootA4_15200 PF01029 NusB family NtRootA4_15210 PF00834 Ribulose-phosphate 3 epimerase family NtRootA4_15240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootA4_15240 PF01872 RibD C-terminal domain NtRootA4_15250 PF00677 Lumazine binding domain NtRootA4_15260 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NtRootA4_15260 PF00925 GTP cyclohydrolase II NtRootA4_15270 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NtRootA4_15270 PF00925 GTP cyclohydrolase II NtRootA4_15280 PF00885 6,7-dimethyl-8-ribityllumazine synthase NtRootA4_15290 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NtRootA4_15300 PF01634 ATP phosphoribosyltransferase NtRootA4_15300 PF08029 HisG, C-terminal domain NtRootA4_15310 PF00977 Histidine biosynthesis protein NtRootA4_15330 PF01502 Phosphoribosyl-AMP cyclohydrolase NtRootA4_15340 PF04715 Anthranilate synthase component I, N terminal region NtRootA4_15340 PF00425 chorismate binding enzyme NtRootA4_15370 PF00218 Indole-3-glycerol phosphate synthase NtRootA4_15380 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA4_15390 PF00290 Tryptophan synthase alpha chain NtRootA4_15400 PF01790 Prolipoprotein diacylglyceryl transferase NtRootA4_15410 PF01493 GXGXG motif NtRootA4_15410 PF00310 Glutamine amidotransferases class-II NtRootA4_15410 PF04898 Glutamate synthase central domain NtRootA4_15410 PF01645 Conserved region in glutamate synthase NtRootA4_15420 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NtRootA4_15420 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_15430 PF00224 Pyruvate kinase, barrel domain NtRootA4_15430 PF02887 Pyruvate kinase, alpha/beta domain NtRootA4_15440 PF03861 ANTAR domain NtRootA4_15440 PF00072 Response regulator receiver domain NtRootA4_15470 PF02954 Bacterial regulatory protein, Fis family NtRootA4_15470 PF00072 Response regulator receiver domain NtRootA4_15470 PF00158 Sigma-54 interaction domain NtRootA4_15480 PF01842 ACT domain NtRootA4_15480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA4_15480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA4_15490 PF00202 Aminotransferase class-III NtRootA4_15500 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA4_15510 PF05378 Hydantoinase/oxoprolinase N-terminal region NtRootA4_15510 PF01968 Hydantoinase/oxoprolinase NtRootA4_15530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_15530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_15540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA4_15540 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA4_15540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA4_15550 PF00171 Aldehyde dehydrogenase family NtRootA4_15560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_15560 PF10518 TAT (twin-arginine translocation) pathway signal sequence NtRootA4_15580 PF00920 Dehydratase family NtRootA4_15590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA4_15610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_15610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_15630 PF00005 ABC transporter NtRootA4_15640 PF02653 Branched-chain amino acid transport system / permease component NtRootA4_15650 PF13407 Periplasmic binding protein domain NtRootA4_15660 PF02913 FAD linked oxidases, C-terminal domain NtRootA4_15660 PF01565 FAD binding domain NtRootA4_15660 PF13183 4Fe-4S dicluster domain NtRootA4_15720 PF01261 Xylose isomerase-like TIM barrel NtRootA4_15730 PF08946 Osmosensory transporter coiled coil NtRootA4_15730 PF00083 Sugar (and other) transporter NtRootA4_15740 PF02224 Cytidylate kinase NtRootA4_15750 PF01081 KDPG and KHG aldolase NtRootA4_15770 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_15840 PF00106 short chain dehydrogenase NtRootA4_15860 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_15870 PF14785 Maltose transport system permease protein MalF P2 domain NtRootA4_15870 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_15890 PF03315 Serine dehydratase beta chain NtRootA4_15890 PF03313 Serine dehydratase alpha chain NtRootA4_15900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_15900 PF03466 LysR substrate binding domain NtRootA4_15920 PF07690 Major Facilitator Superfamily NtRootA4_15950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootA4_15950 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_15960 PF01638 HxlR-like helix-turn-helix NtRootA4_15990 PF06736 Protein of unknown function (DUF1211) NtRootA4_16000 PF06628 Catalase-related immune-responsive NtRootA4_16000 PF00199 Catalase NtRootA4_16000 PF18011 C-terminal domain found in long catalases NtRootA4_16030 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_16050 PF00012 Hsp70 protein NtRootA4_16060 PF01025 GrpE NtRootA4_16070 PF00226 DnaJ domain NtRootA4_16070 PF01556 DnaJ C terminal domain NtRootA4_16090 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA4_16090 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootA4_16090 PF02861 Clp amino terminal domain, pathogenicity island component NtRootA4_16090 PF17871 AAA lid domain NtRootA4_16090 PF07724 AAA domain (Cdc48 subfamily) NtRootA4_16100 PF00085 Thioredoxin NtRootA4_16110 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_16120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA4_16130 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_16140 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_16140 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootA4_16150 PF00005 ABC transporter NtRootA4_16150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA4_16160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA4_16160 PF00005 ABC transporter NtRootA4_16170 PF08244 Glycosyl hydrolases family 32 C terminal NtRootA4_16170 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootA4_16180 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootA4_16180 PF08244 Glycosyl hydrolases family 32 C terminal NtRootA4_16190 PF07729 FCD domain NtRootA4_16190 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_16210 PF01266 FAD dependent oxidoreductase NtRootA4_16240 PF01042 Endoribonuclease L-PSP NtRootA4_16290 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_16290 PF07729 FCD domain NtRootA4_16300 PF00171 Aldehyde dehydrogenase family NtRootA4_16310 PF00202 Aminotransferase class-III NtRootA4_16330 PF00005 ABC transporter NtRootA4_16340 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_16350 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA4_16370 PF01266 FAD dependent oxidoreductase NtRootA4_16380 PF00171 Aldehyde dehydrogenase family NtRootA4_16390 PF00180 Isocitrate/isopropylmalate dehydrogenase NtRootA4_16400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA4_16420 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_16420 PF00107 Zinc-binding dehydrogenase NtRootA4_16430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA4_16440 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_16450 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_16460 PF00005 ABC transporter NtRootA4_16460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA4_16470 PF16295 Tetracyclin repressor-like, C-terminal domain NtRootA4_16470 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_16480 PF00561 alpha/beta hydrolase fold NtRootA4_16490 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_16490 PF16197 Ketoacyl-synthetase C-terminal extension NtRootA4_16490 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootA4_16490 PF14765 Polyketide synthase dehydratase NtRootA4_16490 PF00550 Phosphopantetheine attachment site NtRootA4_16490 PF08659 KR domain NtRootA4_16490 PF00698 Acyl transferase domain NtRootA4_16490 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootA4_16570 PF00582 Universal stress protein family NtRootA4_16610 PF13492 GAF domain NtRootA4_16610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_16610 PF13185 GAF domain NtRootA4_16610 PF07730 Histidine kinase NtRootA4_16620 PF00582 Universal stress protein family NtRootA4_16640 PF00582 Universal stress protein family NtRootA4_16650 PF00582 Universal stress protein family NtRootA4_16660 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NtRootA4_16660 PF00753 Metallo-beta-lactamase superfamily NtRootA4_16660 PF10996 Beta-Casp domain NtRootA4_16680 PF00196 Bacterial regulatory proteins, luxR family NtRootA4_16680 PF00072 Response regulator receiver domain NtRootA4_16690 PF13185 GAF domain NtRootA4_16690 PF07730 Histidine kinase NtRootA4_16690 PF13492 GAF domain NtRootA4_16690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_16720 PF00107 Zinc-binding dehydrogenase NtRootA4_16720 PF13823 Alcohol dehydrogenase GroES-associated NtRootA4_16720 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_16730 PF00403 Heavy-metal-associated domain NtRootA4_16750 PF07085 DRTGG domain NtRootA4_16750 PF01515 Phosphate acetyl/butaryl transferase NtRootA4_16760 PF00582 Universal stress protein family NtRootA4_16770 PF00690 Cation transporter/ATPase, N-terminus NtRootA4_16770 PF00689 Cation transporting ATPase, C-terminus NtRootA4_16790 PF00582 Universal stress protein family NtRootA4_16800 PF00871 Acetokinase family NtRootA4_16810 PF09363 XFP C-terminal domain NtRootA4_16810 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase NtRootA4_16810 PF09364 XFP N-terminal domain NtRootA4_16830 PF17866 AAA lid domain NtRootA4_16830 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA4_16920 PF02896 PEP-utilising enzyme, TIM barrel domain NtRootA4_16920 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootA4_16920 PF00391 PEP-utilising enzyme, mobile domain NtRootA4_16930 PF03618 Kinase/pyrophosphorylase NtRootA4_16940 PF01037 Lrp/AsnC ligand binding domain NtRootA4_16950 PF10415 Fumarase C C-terminus NtRootA4_16950 PF00206 Lyase NtRootA4_16960 PF00171 Aldehyde dehydrogenase family NtRootA4_16970 PF01842 ACT domain NtRootA4_16970 PF00742 Homoserine dehydrogenase NtRootA4_16970 PF03447 Homoserine dehydrogenase, NAD binding domain NtRootA4_17010 PF04303 PrpF protein NtRootA4_17020 PF03466 LysR substrate binding domain NtRootA4_17020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_17030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_17030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_17050 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_17060 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_17070 PF01547 Bacterial extracellular solute-binding protein NtRootA4_17080 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_17100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootA4_17100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootA4_17110 PF00501 AMP-binding enzyme NtRootA4_17120 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NtRootA4_17140 PF00999 Sodium/hydrogen exchanger family NtRootA4_17150 PF13298 DNA polymerase Ligase (LigD) NtRootA4_17150 PF01068 ATP dependent DNA ligase domain NtRootA4_17150 PF04679 ATP dependent DNA ligase C terminal region NtRootA4_17180 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA4_17180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA4_17180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA4_17190 PF17755 UvrA DNA-binding domain NtRootA4_17210 PF03462 PCRF domain NtRootA4_17210 PF00472 RF-1 domain NtRootA4_17300 PF07687 Peptidase dimerisation domain NtRootA4_17300 PF01546 Peptidase family M20/M25/M40 NtRootA4_17310 PF00171 Aldehyde dehydrogenase family NtRootA4_17320 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootA4_17320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootA4_17330 PF01418 Helix-turn-helix domain, rpiR family NtRootA4_17330 PF01380 SIS domain NtRootA4_17340 PF07976 Phenol hydroxylase, C-terminal dimerisation domain NtRootA4_17340 PF01494 FAD binding domain NtRootA4_17350 PF01367 5'-3' exonuclease, C-terminal SAM fold NtRootA4_17350 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NtRootA4_17370 PF03795 YCII-related domain NtRootA4_17380 PF04542 Sigma-70 region 2 NtRootA4_17380 PF08281 Sigma-70, region 4 NtRootA4_17410 PF00107 Zinc-binding dehydrogenase NtRootA4_17410 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_17420 PF00270 DEAD/DEAH box helicase NtRootA4_17420 PF04408 Helicase associated domain (HA2) NtRootA4_17420 PF00271 Helicase conserved C-terminal domain NtRootA4_17420 PF08482 ATP-dependent helicase C-terminal NtRootA4_17430 PF01979 Amidohydrolase family NtRootA4_17470 PF00679 Elongation factor G C-terminus NtRootA4_17470 PF03144 Elongation factor Tu domain 2 NtRootA4_17470 PF00009 Elongation factor Tu GTP binding domain NtRootA4_17470 PF03764 Elongation factor G, domain IV NtRootA4_17470 PF14492 Elongation Factor G, domain II NtRootA4_17500 PF01300 Telomere recombination NtRootA4_17520 PF00005 ABC transporter NtRootA4_17540 PF01869 BadF/BadG/BcrA/BcrD ATPase family NtRootA4_17550 PF07702 UTRA domain NtRootA4_17550 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_17560 PF09339 IclR helix-turn-helix domain NtRootA4_17560 PF01614 Bacterial transcriptional regulator NtRootA4_17580 PF00890 FAD binding domain NtRootA4_17600 PF00083 Sugar (and other) transporter NtRootA4_17600 PF07690 Major Facilitator Superfamily NtRootA4_17620 PF00266 Aminotransferase class-V NtRootA4_17630 PF03301 Tryptophan 2,3-dioxygenase NtRootA4_17650 PF01384 Phosphate transporter family NtRootA4_17700 PF03061 Thioesterase superfamily NtRootA4_17710 PF00476 DNA polymerase family A NtRootA4_17710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NtRootA4_17710 PF01367 5'-3' exonuclease, C-terminal SAM fold NtRootA4_17720 PF13530 Sterol carrier protein domain NtRootA4_17720 PF17668 Acetyltransferase (GNAT) domain NtRootA4_17740 PF00575 S1 RNA binding domain NtRootA4_17750 PF09186 Domain of unknown function (DUF1949) NtRootA4_17750 PF01205 Uncharacterized protein family UPF0029 NtRootA4_17760 PF01121 Dephospho-CoA kinase NtRootA4_17760 PF04229 GrpB protein NtRootA4_17770 PF00271 Helicase conserved C-terminal domain NtRootA4_17770 PF02151 UvrB/uvrC motif NtRootA4_17770 PF12344 Ultra-violet resistance protein B NtRootA4_17770 PF17757 UvrB interaction domain NtRootA4_17770 PF04851 Type III restriction enzyme, res subunit NtRootA4_17780 PF03741 Integral membrane protein TerC family NtRootA4_17790 PF07690 Major Facilitator Superfamily NtRootA4_17800 PF00561 alpha/beta hydrolase fold NtRootA4_17810 PF13673 Acetyltransferase (GNAT) domain NtRootA4_17820 PF02515 CoA-transferase family III NtRootA4_17860 PF17760 UvrA interaction domain NtRootA4_17860 PF00005 ABC transporter NtRootA4_17860 PF17755 UvrA DNA-binding domain NtRootA4_17870 PF13419 Haloacid dehalogenase-like hydrolase NtRootA4_17880 PF00501 AMP-binding enzyme NtRootA4_17880 PF01553 Acyltransferase NtRootA4_17890 PF12826 Helix-hairpin-helix motif NtRootA4_17890 PF01541 GIY-YIG catalytic domain NtRootA4_17890 PF08459 UvrC Helix-hairpin-helix N-terminal NtRootA4_17890 PF02151 UvrB/uvrC motif NtRootA4_17900 PF03668 P-loop ATPase protein family NtRootA4_17910 PF01933 Uncharacterised protein family UPF0052 NtRootA4_17920 PF10298 WhiA N-terminal LAGLIDADG-like domain NtRootA4_17920 PF02650 WhiA C-terminal HTH domain NtRootA4_17920 PF14527 WhiA LAGLIDADG-like domain NtRootA4_17930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NtRootA4_17930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NtRootA4_17940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NtRootA4_17940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NtRootA4_17950 PF00162 Phosphoglycerate kinase NtRootA4_17960 PF00121 Triosephosphate isomerase NtRootA4_17970 PF03840 Preprotein translocase SecG subunit NtRootA4_17990 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NtRootA4_18010 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NtRootA4_18010 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NtRootA4_18020 PF00342 Phosphoglucose isomerase NtRootA4_18030 PF00923 Transaldolase/Fructose-6-phosphate aldolase NtRootA4_18040 PF02779 Transketolase, pyrimidine binding domain NtRootA4_18040 PF02780 Transketolase, C-terminal domain NtRootA4_18040 PF00456 Transketolase, thiamine diphosphate binding domain NtRootA4_18050 PF01040 UbiA prenyltransferase family NtRootA4_18090 PF02687 FtsX-like permease family NtRootA4_18090 PF12704 MacB-like periplasmic core domain NtRootA4_18090 PF00005 ABC transporter NtRootA4_18100 PF02628 Cytochrome oxidase assembly protein NtRootA4_18120 PF00005 ABC transporter NtRootA4_18140 PF01458 Uncharacterized protein family (UPF0051) NtRootA4_18150 PF01458 Uncharacterized protein family (UPF0051) NtRootA4_18170 PF00005 ABC transporter NtRootA4_18180 PF01883 Iron-sulfur cluster assembly protein NtRootA4_18190 PF04228 Putative neutral zinc metallopeptidase NtRootA4_18200 PF13193 AMP-binding enzyme C-terminal domain NtRootA4_18200 PF00501 AMP-binding enzyme NtRootA4_18210 PF02803 Thiolase, C-terminal domain NtRootA4_18210 PF00108 Thiolase, N-terminal domain NtRootA4_18230 PF00005 ABC transporter NtRootA4_18240 PF02632 BioY family NtRootA4_18250 PF12848 ABC transporter NtRootA4_18250 PF00005 ABC transporter NtRootA4_18250 PF16326 ABC transporter C-terminal domain NtRootA4_18260 PF03129 Anticodon binding domain NtRootA4_18260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootA4_18260 PF04073 Aminoacyl-tRNA editing domain NtRootA4_18320 PF00005 ABC transporter NtRootA4_18360 PF00005 ABC transporter NtRootA4_18380 PF00588 SpoU rRNA Methylase family NtRootA4_18390 PF01197 Ribosomal protein L31 NtRootA4_18400 PF10437 Bacterial lipoate protein ligase C-terminus NtRootA4_18400 PF03099 Biotin/lipoate A/B protein ligase family NtRootA4_18430 PF11838 ERAP1-like C-terminal domain NtRootA4_18430 PF01433 Peptidase family M1 domain NtRootA4_18440 PF03601 Conserved hypothetical protein 698 NtRootA4_18450 PF04174 A circularly permuted ATPgrasp NtRootA4_18470 PF08379 Bacterial transglutaminase-like N-terminal region NtRootA4_18470 PF01841 Transglutaminase-like superfamily NtRootA4_18480 PF00106 short chain dehydrogenase NtRootA4_18490 PF00483 Nucleotidyl transferase NtRootA4_18500 PF13439 Glycosyltransferase Family 4 NtRootA4_18500 PF00534 Glycosyl transferases group 1 NtRootA4_18530 PF02803 Thiolase, C-terminal domain NtRootA4_18530 PF00108 Thiolase, N-terminal domain NtRootA4_18560 PF07687 Peptidase dimerisation domain NtRootA4_18560 PF01546 Peptidase family M20/M25/M40 NtRootA4_18600 PF02397 Bacterial sugar transferase NtRootA4_18610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_18610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_18620 PF16363 GDP-mannose 4,6 dehydratase NtRootA4_18630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NtRootA4_18750 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NtRootA4_18760 PF16363 GDP-mannose 4,6 dehydratase NtRootA4_18770 PF00483 Nucleotidyl transferase NtRootA4_18780 PF00248 Aldo/keto reductase family NtRootA4_18790 PF02673 Bacitracin resistance protein BacA NtRootA4_18800 PF01406 tRNA synthetases class I (C) catalytic domain NtRootA4_18820 PF13419 Haloacid dehalogenase-like hydrolase NtRootA4_18830 PF00571 CBS domain NtRootA4_18830 PF02163 Peptidase family M50 NtRootA4_18840 PF08704 tRNA methyltransferase complex GCD14 subunit NtRootA4_18850 PF17758 Proteasomal ATPase OB N-terminal domain NtRootA4_18850 PF16450 Proteasomal ATPase OB C-terminal domain NtRootA4_18850 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA4_18860 PF03136 Pup-ligase protein NtRootA4_18870 PF05639 Pup-like protein NtRootA4_18880 PF00227 Proteasome subunit NtRootA4_18890 PF00227 Proteasome subunit NtRootA4_18900 PF03136 Pup-ligase protein NtRootA4_18910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NtRootA4_18920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NtRootA4_18930 PF13280 WYL domain NtRootA4_18950 PF02416 mttA/Hcf106 family NtRootA4_18960 PF00902 Sec-independent protein translocase protein (TatC) NtRootA4_18970 PF00270 DEAD/DEAH box helicase NtRootA4_18970 PF08148 DSHCT (NUC185) domain NtRootA4_18970 PF00271 Helicase conserved C-terminal domain NtRootA4_18980 PF07969 Amidohydrolase family NtRootA4_18990 PF00535 Glycosyl transferase family 2 NtRootA4_19000 PF13397 RNA polymerase-binding protein NtRootA4_19010 PF01145 SPFH domain / Band 7 family NtRootA4_19040 PF07676 WD40-like Beta Propeller Repeat NtRootA4_19040 PF00326 Prolyl oligopeptidase family NtRootA4_19050 PF01327 Polypeptide deformylase NtRootA4_19080 PF01494 FAD binding domain NtRootA4_19100 PF02797 Chalcone and stilbene synthases, C-terminal domain NtRootA4_19100 PF00195 Chalcone and stilbene synthases, N-terminal domain NtRootA4_19110 PF17760 UvrA interaction domain NtRootA4_19110 PF17755 UvrA DNA-binding domain NtRootA4_19110 PF00005 ABC transporter NtRootA4_19190 PF02885 Glycosyl transferase family, helical bundle domain NtRootA4_19190 PF00591 Glycosyl transferase family, a/b domain NtRootA4_19200 PF00510 Cytochrome c oxidase subunit III NtRootA4_19210 PF00034 Cytochrome c NtRootA4_19210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NtRootA4_19220 PF00355 Rieske [2Fe-2S] domain NtRootA4_19230 PF13631 Cytochrome b(N-terminal)/b6/petB NtRootA4_19250 PF07729 FCD domain NtRootA4_19250 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_19260 PF00381 PTS HPr component phosphorylation site NtRootA4_19270 PF12270 Cytochrome c oxidase subunit IV NtRootA4_19280 PF00115 Cytochrome C and Quinol oxidase polypeptide I NtRootA4_19290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NtRootA4_19300 PF01521 Iron-sulphur cluster biosynthesis NtRootA4_19310 PF01546 Peptidase family M20/M25/M40 NtRootA4_19310 PF07687 Peptidase dimerisation domain NtRootA4_19320 PF11241 Protein of unknown function (DUF3043) NtRootA4_19330 PF01180 Dihydroorotate dehydrogenase NtRootA4_19340 PF00890 FAD binding domain NtRootA4_19370 PF01255 Putative undecaprenyl diphosphate synthase NtRootA4_19380 PF11967 Recombination protein O N terminal NtRootA4_19380 PF02565 Recombination protein O C terminal NtRootA4_19390 PF00682 HMGL-like NtRootA4_19390 PF08502 LeuA allosteric (dimerisation) domain NtRootA4_19400 PF01431 Peptidase family M13 NtRootA4_19400 PF05649 Peptidase family M13 NtRootA4_19410 PF03816 Cell envelope-related transcriptional attenuator domain NtRootA4_19420 PF07650 KH domain NtRootA4_19420 PF01926 50S ribosome-binding GTPase NtRootA4_19430 PF01595 Cyclin M transmembrane N-terminal domain NtRootA4_19430 PF03471 Transporter associated domain NtRootA4_19430 PF00571 CBS domain NtRootA4_19440 PF02130 Uncharacterized protein family UPF0054 NtRootA4_19450 PF02562 PhoH-like protein NtRootA4_19470 PF04452 RNA methyltransferase NtRootA4_19480 PF00226 DnaJ domain NtRootA4_19480 PF01556 DnaJ C terminal domain NtRootA4_19480 PF00684 DnaJ central domain NtRootA4_19490 PF01628 HrcA protein C terminal domain NtRootA4_19490 PF08220 DeoR-like helix-turn-helix domain NtRootA4_19520 PF06969 HemN C-terminal domain NtRootA4_19520 PF04055 Radical SAM superfamily NtRootA4_19530 PF00679 Elongation factor G C-terminus NtRootA4_19530 PF00009 Elongation factor Tu GTP binding domain NtRootA4_19530 PF06421 GTP-binding protein LepA C-terminus NtRootA4_19550 PF01649 Ribosomal protein S20 NtRootA4_19600 PF02645 Uncharacterised protein, DegV family COG1307 NtRootA4_19610 PF08264 Anticodon-binding domain of tRNA NtRootA4_19610 PF00133 tRNA synthetases class I (I, L, M and V) NtRootA4_19610 PF13603 Leucyl-tRNA synthetase, Domain 2 NtRootA4_19610 PF09334 tRNA synthetases class I (M) NtRootA4_19620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootA4_19620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootA4_19630 PF00230 Major intrinsic protein NtRootA4_19640 PF01266 FAD dependent oxidoreductase NtRootA4_19640 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NtRootA4_19660 PF04198 Putative sugar-binding domain NtRootA4_19670 PF00248 Aldo/keto reductase family NtRootA4_19690 PF13439 Glycosyltransferase Family 4 NtRootA4_19700 PF17764 3′ DNA-binding domain (3′BD) NtRootA4_19710 PF00438 S-adenosylmethionine synthetase, N-terminal domain NtRootA4_19710 PF02773 S-adenosylmethionine synthetase, C-terminal domain NtRootA4_19710 PF02772 S-adenosylmethionine synthetase, central domain NtRootA4_19720 PF04127 DNA / pantothenate metabolism flavoprotein NtRootA4_19720 PF02441 Flavoprotein NtRootA4_19730 PF01192 RNA polymerase Rpb6 NtRootA4_19740 PF00625 Guanylate kinase NtRootA4_19760 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NtRootA4_19770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootA4_19770 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NtRootA4_19770 PF02142 MGS-like domain NtRootA4_19780 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NtRootA4_19780 PF00117 Glutamine amidotransferase class-I NtRootA4_19800 PF01979 Amidohydrolase family NtRootA4_19810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NtRootA4_19810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NtRootA4_19820 PF00156 Phosphoribosyl transferase domain NtRootA4_19840 PF01029 NusB family NtRootA4_19850 PF09285 Elongation factor P, C-terminal NtRootA4_19850 PF01132 Elongation factor P (EF-P) OB domain NtRootA4_19850 PF08207 Elongation factor P (EF-P) KOW-like domain NtRootA4_19870 PF01761 3-dehydroquinate synthase NtRootA4_19880 PF01202 Shikimate kinase NtRootA4_19890 PF01264 Chorismate synthase NtRootA4_19900 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NtRootA4_19900 PF01488 Shikimate / quinate 5-dehydrogenase NtRootA4_19900 PF08501 Shikimate dehydrogenase substrate binding domain NtRootA4_19920 PF03652 Holliday junction resolvase NtRootA4_19930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NtRootA4_19930 PF02272 DHHA1 domain NtRootA4_19930 PF01411 tRNA synthetases class II (A) NtRootA4_19960 PF01479 S4 domain NtRootA4_19960 PF00163 Ribosomal protein S4/S9 N-terminal domain NtRootA4_19970 PF12002 MgsA AAA+ ATPase C terminal NtRootA4_19970 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA4_19970 PF16193 AAA C-terminal domain NtRootA4_20000 PF01336 OB-fold nucleic acid binding domain NtRootA4_20000 PF02938 GAD domain NtRootA4_20000 PF00152 tRNA synthetases class II (D, K and N) NtRootA4_20010 PF03129 Anticodon binding domain NtRootA4_20010 PF13393 Histidyl-tRNA synthetase NtRootA4_20030 PF03993 Domain of Unknown Function (DUF349) NtRootA4_20050 PF04607 Region found in RelA / SpoT proteins NtRootA4_20050 PF02824 TGS domain NtRootA4_20050 PF13291 ACT domain NtRootA4_20060 PF07549 SecD/SecF GG Motif NtRootA4_20060 PF02355 Protein export membrane protein NtRootA4_20070 PF07549 SecD/SecF GG Motif NtRootA4_20070 PF02355 Protein export membrane protein NtRootA4_20090 PF17864 RuvB AAA lid domain NtRootA4_20090 PF05491 RuvB C-terminal winged helix domain NtRootA4_20090 PF05496 Holliday junction DNA helicase RuvB P-loop domain NtRootA4_20100 PF07499 RuvA, C-terminal domain NtRootA4_20100 PF01330 RuvA N terminal domain NtRootA4_20110 PF02075 Crossover junction endodeoxyribonuclease RuvC NtRootA4_20120 PF01709 Transcriptional regulator NtRootA4_20130 PF01174 SNO glutamine amidotransferase family NtRootA4_20140 PF08353 Domain of unknown function (DUF1727) NtRootA4_20140 PF08245 Mur ligase middle domain NtRootA4_20150 PF07685 CobB/CobQ-like glutamine amidotransferase domain NtRootA4_20170 PF01432 Peptidase family M3 NtRootA4_20180 PF01680 SOR/SNZ family NtRootA4_20190 PF01066 CDP-alcohol phosphatidyltransferase NtRootA4_20200 PF01230 HIT domain NtRootA4_20210 PF03129 Anticodon binding domain NtRootA4_20210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootA4_20210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NtRootA4_20220 PF14579 Helix-hairpin-helix motif NtRootA4_20220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NtRootA4_20220 PF02811 PHP domain NtRootA4_20220 PF07733 Bacterial DNA polymerase III alpha NTPase domain NtRootA4_20240 PF01494 FAD binding domain NtRootA4_20270 PF02586 SOS response associated peptidase (SRAP) NtRootA4_20280 PF00462 Glutaredoxin NtRootA4_20290 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_20290 PF00107 Zinc-binding dehydrogenase NtRootA4_20300 PF00753 Metallo-beta-lactamase superfamily NtRootA4_20310 PF00384 Molybdopterin oxidoreductase NtRootA4_20310 PF01568 Molydopterin dinucleotide binding domain NtRootA4_20360 PF01494 FAD binding domain NtRootA4_20390 PF06250 YhcG PDDEXK nuclease domain NtRootA4_20390 PF17761 DUF1016 N-terminal domain NtRootA4_20410 PF00005 ABC transporter NtRootA4_20410 PF08402 TOBE domain NtRootA4_20420 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_20440 PF00268 Ribonucleotide reductase, small chain NtRootA4_20450 PF02867 Ribonucleotide reductase, barrel domain NtRootA4_20450 PF00317 Ribonucleotide reductase, all-alpha domain NtRootA4_20450 PF08343 Ribonucleotide reductase N-terminal NtRootA4_20460 PF07972 NrdI Flavodoxin like NtRootA4_20480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_20480 PF03466 LysR substrate binding domain NtRootA4_20550 PF17863 AAA lid domain NtRootA4_20550 PF07726 ATPase family associated with various cellular activities (AAA) NtRootA4_20570 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_20580 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_20600 PF00480 ROK family NtRootA4_20610 PF05175 Methyltransferase small domain NtRootA4_20630 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_20660 PF01467 Cytidylyltransferase-like NtRootA4_20680 PF00171 Aldehyde dehydrogenase family NtRootA4_20690 PF00696 Amino acid kinase family NtRootA4_20690 PF01472 PUA domain NtRootA4_20700 PF01018 GTP1/OBG NtRootA4_20700 PF01926 50S ribosome-binding GTPase NtRootA4_20700 PF09269 Domain of unknown function (DUF1967) NtRootA4_20710 PF01016 Ribosomal L27 protein NtRootA4_20720 PF00829 Ribosomal prokaryotic L21 protein NtRootA4_20730 PF02581 Thiamine monophosphate synthase NtRootA4_20730 PF08543 Phosphomethylpyrimidine kinase NtRootA4_20730 PF03070 TENA/THI-4/PQQC family NtRootA4_20740 PF10150 Ribonuclease E/G family NtRootA4_20760 PF00334 Nucleoside diphosphate kinase NtRootA4_20780 PF02875 Mur ligase family, glutamate ligase domain NtRootA4_20780 PF08245 Mur ligase middle domain NtRootA4_20790 PF08264 Anticodon-binding domain of tRNA NtRootA4_20790 PF00133 tRNA synthetases class I (I, L, M and V) NtRootA4_20810 PF00106 short chain dehydrogenase NtRootA4_20820 PF08264 Anticodon-binding domain of tRNA NtRootA4_20820 PF00133 tRNA synthetases class I (I, L, M and V) NtRootA4_20830 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootA4_20830 PF06827 Zinc finger found in FPG and IleRS NtRootA4_20840 PF01323 DSBA-like thioredoxin domain NtRootA4_20850 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootA4_20850 PF06689 ClpX C4-type zinc finger NtRootA4_20850 PF07724 AAA domain (Cdc48 subfamily) NtRootA4_20860 PF00574 Clp protease NtRootA4_20870 PF00574 Clp protease NtRootA4_20880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NtRootA4_20880 PF05698 Bacterial trigger factor protein (TF) C-terminus NtRootA4_20880 PF05697 Bacterial trigger factor protein (TF) NtRootA4_20890 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NtRootA4_20890 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootA4_20890 PF06827 Zinc finger found in FPG and IleRS NtRootA4_20900 PF02502 Ribose/Galactose Isomerase NtRootA4_20920 PF01433 Peptidase family M1 domain NtRootA4_20920 PF11838 ERAP1-like C-terminal domain NtRootA4_20950 PF00924 Mechanosensitive ion channel NtRootA4_20960 PF01152 Bacterial-like globin NtRootA4_20990 PF00005 ABC transporter NtRootA4_20990 PF12848 ABC transporter NtRootA4_21030 PF00436 Single-strand binding protein family NtRootA4_21060 PF00929 Exonuclease NtRootA4_21070 PF01327 Polypeptide deformylase NtRootA4_21110 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NtRootA4_21110 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NtRootA4_21120 PF03883 Peroxide stress protein YaaA NtRootA4_21130 PF02591 C4-type zinc ribbon domain NtRootA4_21140 PF01784 NIF3 (NGG1p interacting factor 3) NtRootA4_21150 PF01625 Peptide methionine sulfoxide reductase NtRootA4_21160 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA4_21170 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootA4_21180 PF00106 short chain dehydrogenase NtRootA4_21190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootA4_21190 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NtRootA4_21200 PF07729 FCD domain NtRootA4_21200 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_21210 PF00107 Zinc-binding dehydrogenase NtRootA4_21210 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_21230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootA4_21230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootA4_21240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA4_21250 PF01757 Acyltransferase family NtRootA4_21260 PF07690 Major Facilitator Superfamily NtRootA4_21260 PF00083 Sugar (and other) transporter NtRootA4_21270 PF09339 IclR helix-turn-helix domain NtRootA4_21270 PF01614 Bacterial transcriptional regulator NtRootA4_21300 PF02146 Sir2 family NtRootA4_21310 PF00578 AhpC/TSA family NtRootA4_21320 PF11253 Protein of unknown function (DUF3052) NtRootA4_21330 PF00456 Transketolase, thiamine diphosphate binding domain NtRootA4_21330 PF17831 Pyruvate dehydrogenase E1 component middle domain NtRootA4_21340 PF17853 GGDEF-like domain NtRootA4_21340 PF13556 PucR C-terminal helix-turn-helix domain NtRootA4_21350 PF00698 Acyl transferase domain NtRootA4_21360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootA4_21360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootA4_21370 PF00550 Phosphopantetheine attachment site NtRootA4_21380 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootA4_21380 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootA4_21400 PF02899 Phage integrase, N-terminal SAM-like domain NtRootA4_21400 PF00589 Phage integrase family NtRootA4_21420 PF01078 Magnesium chelatase, subunit ChlI NtRootA4_21420 PF13335 Magnesium chelatase, subunit ChlI C-terminal NtRootA4_21430 PF02021 Uncharacterised protein family UPF0102 NtRootA4_21440 PF10611 Protein of unknown function (DUF2469) NtRootA4_21450 PF01351 Ribonuclease HII NtRootA4_21460 PF10502 Signal peptidase, peptidase S26 NtRootA4_21470 PF10502 Signal peptidase, peptidase S26 NtRootA4_21480 PF01245 Ribosomal protein L19 NtRootA4_21490 PF01746 tRNA (Guanine-1)-methyltransferase NtRootA4_21500 PF01782 RimM N-terminal domain NtRootA4_21520 PF00886 Ribosomal protein S16 NtRootA4_21540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootA4_21550 PF01979 Amidohydrolase family NtRootA4_21560 PF13667 ThiC-associated domain NtRootA4_21560 PF01964 Radical SAM ThiC family NtRootA4_21580 PF02881 SRP54-type protein, helical bundle domain NtRootA4_21580 PF00448 SRP54-type protein, GTPase domain NtRootA4_21580 PF02978 Signal peptide binding domain NtRootA4_21590 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NtRootA4_21590 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NtRootA4_21600 PF00543 Nitrogen regulatory protein P-II NtRootA4_21610 PF00909 Ammonium Transporter Family NtRootA4_21620 PF07690 Major Facilitator Superfamily NtRootA4_21630 PF00448 SRP54-type protein, GTPase domain NtRootA4_21630 PF02881 SRP54-type protein, helical bundle domain NtRootA4_21640 PF06470 SMC proteins Flexible Hinge Domain NtRootA4_21640 PF02463 RecF/RecN/SMC N terminal domain NtRootA4_21690 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NtRootA4_21690 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootA4_21690 PF06827 Zinc finger found in FPG and IleRS NtRootA4_21700 PF00035 Double-stranded RNA binding motif NtRootA4_21700 PF14622 Ribonuclease-III-like NtRootA4_21710 PF01783 Ribosomal L32p protein family NtRootA4_21720 PF02620 Large ribosomal RNA subunit accumulation protein YceD NtRootA4_21730 PF01467 Cytidylyltransferase-like NtRootA4_21740 PF00155 Aminotransferase class I and II NtRootA4_21770 PF17191 RecG wedge domain NtRootA4_21770 PF00270 DEAD/DEAH box helicase NtRootA4_21770 PF00271 Helicase conserved C-terminal domain NtRootA4_21780 PF13684 Dihydroxyacetone kinase family NtRootA4_21780 PF02734 DAK2 domain NtRootA4_21790 PF02769 AIR synthase related protein, C-terminal domain NtRootA4_21790 PF00586 AIR synthase related protein, N-terminal domain NtRootA4_21810 PF07478 D-ala D-ala ligase C-terminus NtRootA4_21810 PF01820 D-ala D-ala ligase N-terminus NtRootA4_21820 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NtRootA4_21820 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NtRootA4_21840 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NtRootA4_21850 PF00694 Aconitase C-terminal domain NtRootA4_21860 PF00330 Aconitase family (aconitate hydratase) NtRootA4_21870 PF01614 Bacterial transcriptional regulator NtRootA4_21870 PF09339 IclR helix-turn-helix domain NtRootA4_21920 PF00749 tRNA synthetases class I (E and Q), catalytic domain NtRootA4_21930 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA4_21940 PF16123 Hydroxyacylglutathione hydrolase C-terminus NtRootA4_21940 PF00753 Metallo-beta-lactamase superfamily NtRootA4_21960 PF01063 Amino-transferase class IV NtRootA4_21970 PF00180 Isocitrate/isopropylmalate dehydrogenase NtRootA4_21980 PF07730 Histidine kinase NtRootA4_21990 PF00196 Bacterial regulatory proteins, luxR family NtRootA4_21990 PF00072 Response regulator receiver domain NtRootA4_22000 PF02687 FtsX-like permease family NtRootA4_22000 PF00005 ABC transporter NtRootA4_22000 PF12704 MacB-like periplasmic core domain NtRootA4_22020 PF08264 Anticodon-binding domain of tRNA NtRootA4_22020 PF09334 tRNA synthetases class I (M) NtRootA4_22030 PF00005 ABC transporter NtRootA4_22030 PF02687 FtsX-like permease family NtRootA4_22030 PF12704 MacB-like periplasmic core domain NtRootA4_22050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA4_22050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA4_22050 PF01842 ACT domain NtRootA4_22060 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NtRootA4_22060 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NtRootA4_22070 PF10369 Small subunit of acetolactate synthase NtRootA4_22080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA4_22080 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA4_22080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA4_22090 PF00920 Dehydratase family NtRootA4_22100 PF03466 LysR substrate binding domain NtRootA4_22100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_22110 PF00573 Ribosomal protein L4/L1 family NtRootA4_22120 PF07995 Glucose / Sorbosone dehydrogenase NtRootA4_22140 PF00578 AhpC/TSA family NtRootA4_22150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA4_22160 PF06039 Malate:quinone oxidoreductase (Mqo) NtRootA4_22170 PF00873 AcrB/AcrD/AcrF family NtRootA4_22180 PF00296 Luciferase-like monooxygenase NtRootA4_22200 PF08379 Bacterial transglutaminase-like N-terminal region NtRootA4_22200 PF01841 Transglutaminase-like superfamily NtRootA4_22240 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA4_22260 PF00266 Aminotransferase class-V NtRootA4_22270 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NtRootA4_22270 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NtRootA4_22280 PF00890 FAD binding domain NtRootA4_22280 PF02910 Fumarate reductase flavoprotein C-term NtRootA4_22290 PF02445 Quinolinate synthetase A protein NtRootA4_22300 PF00293 NUDIX domain NtRootA4_22310 PF01037 Lrp/AsnC ligand binding domain NtRootA4_22320 PF00324 Amino acid permease NtRootA4_22330 PF00676 Dehydrogenase E1 component NtRootA4_22340 PF02780 Transketolase, C-terminal domain NtRootA4_22340 PF02779 Transketolase, pyrimidine binding domain NtRootA4_22350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootA4_22350 PF02817 e3 binding domain NtRootA4_22350 PF00364 Biotin-requiring enzyme NtRootA4_22380 PF05139 Erythromycin esterase NtRootA4_22380 PF00156 Phosphoribosyl transferase domain NtRootA4_22390 PF07690 Major Facilitator Superfamily NtRootA4_22390 PF00083 Sugar (and other) transporter NtRootA4_22400 PF01614 Bacterial transcriptional regulator NtRootA4_22400 PF09339 IclR helix-turn-helix domain NtRootA4_22410 PF17409 MoaF C-terminal domain NtRootA4_22410 PF10703 MoaF N-terminal domain NtRootA4_22430 PF14525 AraC-binding-like domain NtRootA4_22440 PF16347 Domain of unknown function (DUF4976) NtRootA4_22440 PF00884 Sulfatase NtRootA4_22450 PF00005 ABC transporter NtRootA4_22460 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_22470 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_22490 PF01979 Amidohydrolase family NtRootA4_22490 PF13382 Adenine deaminase C-terminal domain NtRootA4_22520 PF13476 AAA domain NtRootA4_22530 PF12320 Type 5 capsule protein repressor C-terminal domain NtRootA4_22530 PF00149 Calcineurin-like phosphoesterase NtRootA4_22540 PF00230 Major intrinsic protein NtRootA4_22560 PF02656 Domain of unknown function (DUF202) NtRootA4_22610 PF00005 ABC transporter NtRootA4_22630 PF09335 SNARE associated Golgi protein NtRootA4_22640 PF01725 Ham1 family NtRootA4_22650 PF01138 3' exoribonuclease family, domain 1 NtRootA4_22650 PF03725 3' exoribonuclease family, domain 2 NtRootA4_22660 PF12706 Beta-lactamase superfamily domain NtRootA4_22660 PF00753 Metallo-beta-lactamase superfamily NtRootA4_22670 PF01177 Asp/Glu/Hydantoin racemase NtRootA4_22690 PF02617 ATP-dependent Clp protease adaptor protein ClpS NtRootA4_22700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NtRootA4_22700 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NtRootA4_22710 PF00857 Isochorismatase family NtRootA4_22720 PF04851 Type III restriction enzyme, res subunit NtRootA4_22740 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NtRootA4_22760 PF00005 ABC transporter NtRootA4_22770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NtRootA4_22830 PF01939 Endonuclease NucS NtRootA4_22840 PF01979 Amidohydrolase family NtRootA4_22850 PF00313 'Cold-shock' DNA-binding domain NtRootA4_22860 PF09924 Uncharacterised conserved protein (DUF2156) NtRootA4_22870 PF00756 Putative esterase NtRootA4_22890 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NtRootA4_22900 PF02874 ATP synthase alpha/beta family, beta-barrel domain NtRootA4_22900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NtRootA4_22910 PF00231 ATP synthase NtRootA4_22920 PF02874 ATP synthase alpha/beta family, beta-barrel domain NtRootA4_22920 PF00306 ATP synthase alpha/beta chain, C terminal domain NtRootA4_22920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NtRootA4_22930 PF00213 ATP synthase delta (OSCP) subunit NtRootA4_22940 PF00430 ATP synthase B/B' CF(0) NtRootA4_22950 PF00137 ATP synthase subunit C NtRootA4_22960 PF00119 ATP synthase A chain NtRootA4_23000 PF00953 Glycosyl transferase family 4 NtRootA4_23030 PF01300 Telomere recombination NtRootA4_23040 PF13649 Methyltransferase domain NtRootA4_23040 PF17827 PrmC N-terminal domain NtRootA4_23050 PF03462 PCRF domain NtRootA4_23050 PF00472 RF-1 domain NtRootA4_23060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NtRootA4_23060 PF07498 Rho termination factor, N-terminal domain NtRootA4_23060 PF07497 Rho termination factor, RNA-binding domain NtRootA4_23070 PF00288 GHMP kinases N terminal domain NtRootA4_23070 PF08544 GHMP kinases C terminal NtRootA4_23080 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA4_23090 PF01842 ACT domain NtRootA4_23090 PF00742 Homoserine dehydrogenase NtRootA4_23090 PF03447 Homoserine dehydrogenase, NAD binding domain NtRootA4_23100 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NtRootA4_23100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NtRootA4_23110 PF03485 Arginyl tRNA synthetase N terminal domain NtRootA4_23110 PF05746 DALR anticodon binding domain NtRootA4_23110 PF00750 tRNA synthetases class I (R) NtRootA4_23150 PF00970 Oxidoreductase FAD-binding domain NtRootA4_23150 PF00042 Globin NtRootA4_23150 PF00175 Oxidoreductase NAD-binding domain NtRootA4_23160 PF02868 Thermolysin metallopeptidase, alpha-helical domain NtRootA4_23160 PF01447 Thermolysin metallopeptidase, catalytic domain NtRootA4_23160 PF16485 Protealysin propeptide NtRootA4_23180 PF01965 DJ-1/PfpI family NtRootA4_23210 PF04408 Helicase associated domain (HA2) NtRootA4_23210 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NtRootA4_23210 PF11898 Domain of unknown function (DUF3418) NtRootA4_23210 PF00270 DEAD/DEAH box helicase NtRootA4_23210 PF00271 Helicase conserved C-terminal domain NtRootA4_23220 PF01230 HIT domain NtRootA4_23230 PF00107 Zinc-binding dehydrogenase NtRootA4_23230 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_23240 PF00581 Rhodanese-like domain NtRootA4_23280 PF01475 Ferric uptake regulator family NtRootA4_23290 PF00950 ABC 3 transport family NtRootA4_23300 PF00005 ABC transporter NtRootA4_23310 PF01297 Zinc-uptake complex component A periplasmic NtRootA4_23320 PF00571 CBS domain NtRootA4_23320 PF01595 Cyclin M transmembrane N-terminal domain NtRootA4_23330 PF00571 CBS domain NtRootA4_23330 PF03471 Transporter associated domain NtRootA4_23330 PF01595 Cyclin M transmembrane N-terminal domain NtRootA4_23340 PF02779 Transketolase, pyrimidine binding domain NtRootA4_23340 PF16870 2-oxoglutarate dehydrogenase C-terminal NtRootA4_23340 PF16078 2-oxoglutarate dehydrogenase N-terminus NtRootA4_23340 PF00676 Dehydrogenase E1 component NtRootA4_23340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootA4_23370 PF00144 Beta-lactamase NtRootA4_23410 PF04542 Sigma-70 region 2 NtRootA4_23410 PF08281 Sigma-70, region 4 NtRootA4_23430 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NtRootA4_23440 PF03193 RsgA GTPase NtRootA4_23450 PF00459 Inositol monophosphatase family NtRootA4_23460 PF00266 Aminotransferase class-V NtRootA4_23470 PF08241 Methyltransferase domain NtRootA4_23490 PF07690 Major Facilitator Superfamily NtRootA4_23510 PF13180 PDZ domain NtRootA4_23520 PF01668 SmpB protein NtRootA4_23530 PF01551 Peptidase family M23 NtRootA4_23540 PF02687 FtsX-like permease family NtRootA4_23540 PF18075 FtsX extracellular domain NtRootA4_23550 PF00005 ABC transporter NtRootA4_23560 PF00472 RF-1 domain NtRootA4_23560 PF03462 PCRF domain NtRootA4_23620 PF00437 Type II/IV secretion system protein NtRootA4_23640 PF01183 Glycosyl hydrolases family 25 NtRootA4_23690 PF00535 Glycosyl transferase family 2 NtRootA4_23720 PF14524 Wzt C-terminal domain NtRootA4_23720 PF00005 ABC transporter NtRootA4_23730 PF01061 ABC-2 type transporter NtRootA4_23740 PF17994 Galactofuranosyltransferase 2 N-terminal NtRootA4_23750 PF03275 UDP-galactopyranose mutase NtRootA4_23790 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NtRootA4_23800 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootA4_23820 PF12538 DNA transporter NtRootA4_23820 PF01580 FtsK/SpoIIIE family NtRootA4_23840 PF02467 Transcription factor WhiB NtRootA4_23850 PF12282 Signal transduction histidine kinase NtRootA4_23850 PF07568 Histidine kinase NtRootA4_23850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_23860 PF05088 Bacterial NAD-glutamate dehydrogenase NtRootA4_23930 PF07517 SecA DEAD-like domain NtRootA4_23930 PF07516 SecA Wing and Scaffold domain NtRootA4_23930 PF01043 SecA preprotein cross-linking domain NtRootA4_23940 PF06224 Winged helix DNA-binding domain NtRootA4_23950 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NtRootA4_23950 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NtRootA4_23980 PF10646 Sporulation and spore germination NtRootA4_23980 PF10647 Lipoprotein LpqB beta-propeller domain NtRootA4_23990 PF00672 HAMP domain NtRootA4_23990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_23990 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_24000 PF00072 Response regulator receiver domain NtRootA4_24000 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_24030 PF14258 Domain of unknown function (DUF4350) NtRootA4_24040 PF17863 AAA lid domain NtRootA4_24040 PF07726 ATPase family associated with various cellular activities (AAA) NtRootA4_24100 PF00005 ABC transporter NtRootA4_24100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA4_24110 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_24110 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootA4_24120 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_24170 PF00890 FAD binding domain NtRootA4_24180 PF00248 Aldo/keto reductase family NtRootA4_24200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NtRootA4_24200 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_24210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_24210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_24230 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NtRootA4_24230 PF08501 Shikimate dehydrogenase substrate binding domain NtRootA4_24240 PF00083 Sugar (and other) transporter NtRootA4_24240 PF07690 Major Facilitator Superfamily NtRootA4_24250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_24250 PF03466 LysR substrate binding domain NtRootA4_24260 PF00266 Aminotransferase class-V NtRootA4_24280 PF00781 Diacylglycerol kinase catalytic domain NtRootA4_24290 PF00226 DnaJ domain NtRootA4_24290 PF01556 DnaJ C terminal domain NtRootA4_24290 PF00684 DnaJ central domain NtRootA4_24300 PF00588 SpoU rRNA Methylase family NtRootA4_24310 PF04542 Sigma-70 region 2 NtRootA4_24310 PF04545 Sigma-70, region 4 NtRootA4_24320 PF10099 Anti-sigma-K factor rskA NtRootA4_24330 PF02447 GntP family permease NtRootA4_24350 PF02585 GlcNAc-PI de-N-acetylase NtRootA4_24360 PF01012 Electron transfer flavoprotein domain NtRootA4_24360 PF00766 Electron transfer flavoprotein FAD-binding domain NtRootA4_24370 PF01012 Electron transfer flavoprotein domain NtRootA4_24380 PF13180 PDZ domain NtRootA4_24400 PF04536 TPM domain NtRootA4_24410 PF04012 PspA/IM30 family NtRootA4_24420 PF07702 UTRA domain NtRootA4_24420 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_24430 PF03699 Uncharacterised protein family (UPF0182) NtRootA4_24440 PF05362 Lon protease (S16) C-terminal proteolytic domain NtRootA4_24440 PF13180 PDZ domain NtRootA4_24470 PF00570 HRDC domain NtRootA4_24470 PF00580 UvrD/REP helicase N-terminal domain NtRootA4_24470 PF13361 UvrD-like helicase C-terminal domain NtRootA4_24480 PF00293 NUDIX domain NtRootA4_24480 PF09297 NADH pyrophosphatase zinc ribbon domain NtRootA4_24480 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NtRootA4_24500 PF00580 UvrD/REP helicase N-terminal domain NtRootA4_24500 PF13361 UvrD-like helicase C-terminal domain NtRootA4_24540 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA4_24550 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_24560 PF00005 ABC transporter NtRootA4_24570 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA4_24590 PF00202 Aminotransferase class-III NtRootA4_24600 PF00296 Luciferase-like monooxygenase NtRootA4_24610 PF00490 Delta-aminolevulinic acid dehydratase NtRootA4_24630 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NtRootA4_24630 PF03900 Porphobilinogen deaminase, C-terminal domain NtRootA4_24640 PF00762 Ferrochelatase NtRootA4_24650 PF06778 Chlorite dismutase NtRootA4_24660 PF01593 Flavin containing amine oxidoreductase NtRootA4_24670 PF01208 Uroporphyrinogen decarboxylase (URO-D) NtRootA4_24680 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NtRootA4_24680 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NtRootA4_24680 PF01488 Shikimate / quinate 5-dehydrogenase NtRootA4_24690 PF00106 short chain dehydrogenase NtRootA4_24700 PF00581 Rhodanese-like domain NtRootA4_24700 PF00899 ThiF family NtRootA4_24710 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_24740 PF01329 Pterin 4 alpha carbinolamine dehydratase NtRootA4_24750 PF05690 Thiazole biosynthesis protein ThiG NtRootA4_24770 PF01266 FAD dependent oxidoreductase NtRootA4_24770 PF05690 Thiazole biosynthesis protein ThiG NtRootA4_24780 PF02581 Thiamine monophosphate synthase NtRootA4_24800 PF00561 alpha/beta hydrolase fold NtRootA4_24810 PF00575 S1 RNA binding domain NtRootA4_24810 PF00773 RNB domain NtRootA4_24820 PF00271 Helicase conserved C-terminal domain NtRootA4_24820 PF00270 DEAD/DEAH box helicase NtRootA4_24830 PF01555 DNA methylase NtRootA4_24840 PF01914 MarC family integral membrane protein NtRootA4_24860 PF00557 Metallopeptidase family M24 NtRootA4_24860 PF05195 Aminopeptidase P, N-terminal domain NtRootA4_24880 PF01769 Divalent cation transporter NtRootA4_24880 PF03448 MgtE intracellular N domain NtRootA4_24880 PF00571 CBS domain NtRootA4_24900 PF10609 NUBPL iron-transfer P-loop NTPase NtRootA4_24900 PF01883 Iron-sulfur cluster assembly protein NtRootA4_24910 PF02416 mttA/Hcf106 family NtRootA4_24930 PF04542 Sigma-70 region 2 NtRootA4_24930 PF08281 Sigma-70, region 4 NtRootA4_24940 PF01596 O-methyltransferase NtRootA4_24980 PF03641 Possible lysine decarboxylase NtRootA4_24990 PF00005 ABC transporter NtRootA4_25000 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA4_25010 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_25020 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_25030 PF01546 Peptidase family M20/M25/M40 NtRootA4_25030 PF07687 Peptidase dimerisation domain NtRootA4_25040 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle NtRootA4_25040 PF14602 Hexapeptide repeat of succinyl-transferase NtRootA4_25070 PF13977 BetI-type transcriptional repressor, C-terminal NtRootA4_25070 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_25080 PF16363 GDP-mannose 4,6 dehydratase NtRootA4_25090 PF00285 Citrate synthase, C-terminal domain NtRootA4_25100 PF00155 Aminotransferase class I and II NtRootA4_25110 PF00037 4Fe-4S binding domain NtRootA4_25140 PF00679 Elongation factor G C-terminus NtRootA4_25140 PF14492 Elongation Factor G, domain II NtRootA4_25140 PF00009 Elongation factor Tu GTP binding domain NtRootA4_25140 PF03144 Elongation factor Tu domain 2 NtRootA4_25160 PF00005 ABC transporter NtRootA4_25160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA4_25170 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootA4_25170 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_25180 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_25190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootA4_25210 PF06071 Protein of unknown function (DUF933) NtRootA4_25210 PF01926 50S ribosome-binding GTPase NtRootA4_25220 PF02646 RmuC family NtRootA4_25230 PF02401 LytB protein NtRootA4_25250 PF02601 Exonuclease VII, large subunit NtRootA4_25250 PF13742 OB-fold nucleic acid binding domain NtRootA4_25260 PF02609 Exonuclease VII small subunit NtRootA4_25270 PF03976 Polyphosphate kinase 2 (PPK2) NtRootA4_25280 PF00155 Aminotransferase class I and II NtRootA4_25300 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_25310 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_25320 PF00005 ABC transporter NtRootA4_25320 PF00571 CBS domain NtRootA4_25330 PF03193 RsgA GTPase NtRootA4_25340 PF13344 Haloacid dehalogenase-like hydrolase NtRootA4_25340 PF00293 NUDIX domain NtRootA4_25350 PF01301 Glycosyl hydrolases family 35 NtRootA4_25370 PF02678 Pirin NtRootA4_25370 PF05726 Pirin C-terminal cupin domain NtRootA4_25380 PF01869 BadF/BadG/BcrA/BcrD ATPase family NtRootA4_25410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_25410 PF03466 LysR substrate binding domain NtRootA4_25420 PF07690 Major Facilitator Superfamily NtRootA4_25430 PF06736 Protein of unknown function (DUF1211) NtRootA4_25490 PF01544 CorA-like Mg2+ transporter protein NtRootA4_25510 PF00210 Ferritin-like domain NtRootA4_25520 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NtRootA4_25530 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NtRootA4_25550 PF03109 ABC1 family NtRootA4_25560 PF03551 Transcriptional regulator PadR-like family NtRootA4_25730 PF03861 ANTAR domain NtRootA4_25730 PF00072 Response regulator receiver domain NtRootA4_25750 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA4_25750 PF06480 FtsH Extracellular NtRootA4_25750 PF17862 AAA+ lid domain NtRootA4_25750 PF01434 Peptidase family M41 NtRootA4_25860 PF13302 Acetyltransferase (GNAT) domain NtRootA4_25870 PF00483 Nucleotidyl transferase NtRootA4_25880 PF01812 5-formyltetrahydrofolate cyclo-ligase family NtRootA4_25920 PF00117 Glutamine amidotransferase class-I NtRootA4_25920 PF02540 NAD synthase NtRootA4_25920 PF00958 GMP synthase C terminal domain NtRootA4_25960 PF01266 FAD dependent oxidoreductase NtRootA4_25960 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NtRootA4_25970 PF00478 IMP dehydrogenase / GMP reductase domain NtRootA4_26010 PF00664 ABC transporter transmembrane region NtRootA4_26010 PF00005 ABC transporter NtRootA4_26020 PF00571 CBS domain NtRootA4_26020 PF00478 IMP dehydrogenase / GMP reductase domain NtRootA4_26030 PF01757 Acyltransferase family NtRootA4_26040 PF01757 Acyltransferase family NtRootA4_26050 PF00118 TCP-1/cpn60 chaperonin family NtRootA4_26060 PF00166 Chaperonin 10 Kd subunit NtRootA4_26080 PF18096 THUMP domain-like NtRootA4_26090 PF08501 Shikimate dehydrogenase substrate binding domain NtRootA4_26100 PF00444 Ribosomal protein L36 NtRootA4_26120 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootA4_26130 PF00814 Glycoprotease family NtRootA4_26150 PF00814 Glycoprotease family NtRootA4_26160 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NtRootA4_26170 PF00842 Alanine racemase, C-terminal domain NtRootA4_26170 PF01168 Alanine racemase, N-terminal domain NtRootA4_26190 PF11975 Family 4 glycosyl hydrolase C-terminal domain NtRootA4_26190 PF02056 Family 4 glycosyl hydrolase NtRootA4_26210 PF13439 Glycosyltransferase Family 4 NtRootA4_26210 PF00534 Glycosyl transferases group 1 NtRootA4_26220 PF01268 Formate--tetrahydrofolate ligase NtRootA4_26230 PF01658 Myo-inositol-1-phosphate synthase NtRootA4_26240 PF00248 Aldo/keto reductase family NtRootA4_26250 PF00128 Alpha amylase, catalytic domain NtRootA4_26250 PF11941 Domain of unknown function (DUF3459) NtRootA4_26260 PF00128 Alpha amylase, catalytic domain NtRootA4_26270 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NtRootA4_26270 PF00128 Alpha amylase, catalytic domain NtRootA4_26280 PF03853 YjeF-related protein N-terminus NtRootA4_26280 PF01256 Carbohydrate kinase NtRootA4_26290 PF01648 4'-phosphopantetheinyl transferase superfamily NtRootA4_26300 PF01380 SIS domain NtRootA4_26310 PF00485 Phosphoribulokinase / Uridine kinase family NtRootA4_26330 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootA4_26330 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootA4_26330 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootA4_26330 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootA4_26340 PF00380 Ribosomal protein S9/S16 NtRootA4_26350 PF00572 Ribosomal protein L13 NtRootA4_26390 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NtRootA4_26400 PF00437 Type II/IV secretion system protein NtRootA4_26450 PF13180 PDZ domain NtRootA4_26470 PF01416 tRNA pseudouridine synthase NtRootA4_26480 PF01196 Ribosomal protein L17 NtRootA4_26490 PF01000 RNA polymerase Rpb3/RpoA insert domain NtRootA4_26490 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NtRootA4_26490 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NtRootA4_26500 PF00411 Ribosomal protein S11 NtRootA4_26510 PF00416 Ribosomal protein S13/S18 NtRootA4_26520 PF01176 Translation initiation factor 1A / IF-1 NtRootA4_26530 PF03576 Peptidase family S58 NtRootA4_26540 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_26550 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_26570 PF00557 Metallopeptidase family M24 NtRootA4_26590 PF00501 AMP-binding enzyme NtRootA4_26590 PF13193 AMP-binding enzyme C-terminal domain NtRootA4_26600 PF00067 Cytochrome P450 NtRootA4_26610 PF00535 Glycosyl transferase family 2 NtRootA4_26620 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootA4_26620 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootA4_26640 PF00344 SecY translocase NtRootA4_26650 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NtRootA4_26660 PF00327 Ribosomal protein L30p/L7e NtRootA4_26670 PF03719 Ribosomal protein S5, C-terminal domain NtRootA4_26670 PF00333 Ribosomal protein S5, N-terminal domain NtRootA4_26680 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NtRootA4_26690 PF00347 Ribosomal protein L6 NtRootA4_26700 PF00410 Ribosomal protein S8 NtRootA4_26710 PF00673 ribosomal L5P family C-terminus NtRootA4_26710 PF00281 Ribosomal protein L5 NtRootA4_26720 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NtRootA4_26730 PF00238 Ribosomal protein L14p/L23e NtRootA4_26740 PF00366 Ribosomal protein S17 NtRootA4_26750 PF00831 Ribosomal L29 protein NtRootA4_26760 PF00252 Ribosomal protein L16p/L10e NtRootA4_26770 PF07650 KH domain NtRootA4_26770 PF00189 Ribosomal protein S3, C-terminal domain NtRootA4_26780 PF00237 Ribosomal protein L22p/L17e NtRootA4_26790 PF00203 Ribosomal protein S19 NtRootA4_26800 PF00181 Ribosomal Proteins L2, RNA binding domain NtRootA4_26800 PF03947 Ribosomal Proteins L2, C-terminal domain NtRootA4_26810 PF00276 Ribosomal protein L23 NtRootA4_26820 PF00573 Ribosomal protein L4/L1 family NtRootA4_26830 PF00297 Ribosomal protein L3 NtRootA4_26840 PF00338 Ribosomal protein S10p/S20e NtRootA4_26850 PF00232 Glycosyl hydrolase family 1 NtRootA4_26880 PF03143 Elongation factor Tu C-terminal domain NtRootA4_26880 PF03144 Elongation factor Tu domain 2 NtRootA4_26880 PF00009 Elongation factor Tu GTP binding domain NtRootA4_26890 PF14492 Elongation Factor G, domain II NtRootA4_26890 PF00009 Elongation factor Tu GTP binding domain NtRootA4_26890 PF03144 Elongation factor Tu domain 2 NtRootA4_26890 PF00679 Elongation factor G C-terminus NtRootA4_26890 PF03764 Elongation factor G, domain IV NtRootA4_26900 PF00177 Ribosomal protein S7p/S5e NtRootA4_26910 PF00164 Ribosomal protein S12/S23 NtRootA4_26920 PF04983 RNA polymerase Rpb1, domain 3 NtRootA4_26920 PF05000 RNA polymerase Rpb1, domain 4 NtRootA4_26920 PF00623 RNA polymerase Rpb1, domain 2 NtRootA4_26920 PF04997 RNA polymerase Rpb1, domain 1 NtRootA4_26920 PF04998 RNA polymerase Rpb1, domain 5 NtRootA4_26930 PF04563 RNA polymerase beta subunit NtRootA4_26930 PF04561 RNA polymerase Rpb2, domain 2 NtRootA4_26930 PF04565 RNA polymerase Rpb2, domain 3 NtRootA4_26930 PF10385 RNA polymerase beta subunit external 1 domain NtRootA4_26930 PF00562 RNA polymerase Rpb2, domain 6 NtRootA4_26930 PF04560 RNA polymerase Rpb2, domain 7 NtRootA4_26940 PF02803 Thiolase, C-terminal domain NtRootA4_26940 PF00108 Thiolase, N-terminal domain NtRootA4_26950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootA4_26950 PF04073 Aminoacyl-tRNA editing domain NtRootA4_26950 PF03129 Anticodon binding domain NtRootA4_26960 PF00542 Ribosomal protein L7/L12 C-terminal domain NtRootA4_26960 PF16320 Ribosomal protein L7/L12 dimerisation domain NtRootA4_26970 PF00466 Ribosomal protein L10 NtRootA4_27010 PF00687 Ribosomal protein L1p/L10e family NtRootA4_27020 PF00298 Ribosomal protein L11, RNA binding domain NtRootA4_27020 PF03946 Ribosomal protein L11, N-terminal domain NtRootA4_27030 PF02357 Transcription termination factor nusG NtRootA4_27040 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NtRootA4_27050 PF00155 Aminotransferase class I and II NtRootA4_27060 PF00196 Bacterial regulatory proteins, luxR family NtRootA4_27060 PF00072 Response regulator receiver domain NtRootA4_27130 PF00365 Phosphofructokinase NtRootA4_27150 PF07690 Major Facilitator Superfamily NtRootA4_27180 PF01571 Aminomethyltransferase folate-binding domain NtRootA4_27180 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA4_27190 PF01566 Natural resistance-associated macrophage protein NtRootA4_27190 PF03358 NADPH-dependent FMN reductase NtRootA4_27200 PF08768 Domain of unknown function (DUF1794) NtRootA4_27230 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_27240 PF00583 Acetyltransferase (GNAT) family NtRootA4_27250 PF13090 Polyphosphate kinase C-terminal domain 2 NtRootA4_27250 PF17941 Polyphosphate kinase C-terminal domain 1 NtRootA4_27250 PF02503 Polyphosphate kinase middle domain NtRootA4_27250 PF13089 Polyphosphate kinase N-terminal domain NtRootA4_27260 PF00293 NUDIX domain NtRootA4_27260 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA4_27300 PF00303 Thymidylate synthase NtRootA4_27310 PF00186 Dihydrofolate reductase NtRootA4_27330 PF01118 Semialdehyde dehydrogenase, NAD binding domain NtRootA4_27330 PF02774 Semialdehyde dehydrogenase, dimerisation domain NtRootA4_27370 PF01565 FAD binding domain NtRootA4_27370 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NtRootA4_27380 PF07690 Major Facilitator Superfamily NtRootA4_27400 PF13452 N-terminal half of MaoC dehydratase NtRootA4_27450 PF00005 ABC transporter NtRootA4_27460 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_27470 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NtRootA4_27480 PF00248 Aldo/keto reductase family NtRootA4_27490 PF00128 Alpha amylase, catalytic domain NtRootA4_27500 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_27510 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_27540 PF00480 ROK family NtRootA4_27550 PF00999 Sodium/hydrogen exchanger family NtRootA4_27570 PF01476 LysM domain NtRootA4_27570 PF03734 L,D-transpeptidase catalytic domain NtRootA4_27580 PF03880 DbpA RNA binding domain NtRootA4_27580 PF00270 DEAD/DEAH box helicase NtRootA4_27580 PF00271 Helicase conserved C-terminal domain NtRootA4_27600 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_27600 PF00072 Response regulator receiver domain NtRootA4_27610 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_27610 PF13493 Domain of unknown function (DUF4118) NtRootA4_27610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_27610 PF00582 Universal stress protein family NtRootA4_27610 PF02702 Osmosensitive K+ channel His kinase sensor domain NtRootA4_27630 PF03738 Glutathionylspermidine synthase preATP-grasp NtRootA4_27640 PF13520 Amino acid permease NtRootA4_27650 PF09594 Glycosyltransferase family 87 NtRootA4_27660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA4_27660 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA4_27660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA4_27690 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_27700 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_27710 PF02837 Glycosyl hydrolases family 2, sugar binding domain NtRootA4_27710 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NtRootA4_27710 PF16353 Domain of unknown function(DUF4981) NtRootA4_27710 PF02929 Beta galactosidase small chain NtRootA4_27730 PF01638 HxlR-like helix-turn-helix NtRootA4_27740 PF05506 Domain of unknown function (DUF756) NtRootA4_27740 PF04185 Phosphoesterase family NtRootA4_27750 PF09594 Glycosyltransferase family 87 NtRootA4_27760 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootA4_27770 PF00571 CBS domain NtRootA4_27770 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA4_27810 PF00501 AMP-binding enzyme NtRootA4_27810 PF13193 AMP-binding enzyme C-terminal domain NtRootA4_27830 PF00085 Thioredoxin NtRootA4_27840 PF17933 Tetracyclin repressor-like, C-terminal domain NtRootA4_27840 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_27850 PF13732 Domain of unknown function (DUF4162) NtRootA4_27850 PF00005 ABC transporter NtRootA4_27890 PF07885 Ion channel NtRootA4_27910 PF04461 Protein of unknown function (DUF520) NtRootA4_27920 PF03239 Iron permease FTR1 family NtRootA4_27930 PF13473 Cupredoxin-like domain NtRootA4_27930 PF09375 Imelysin NtRootA4_27940 PF10518 TAT (twin-arginine translocation) pathway signal sequence NtRootA4_27940 PF04261 Dyp-type peroxidase family NtRootA4_27970 PF01435 Peptidase family M48 NtRootA4_28000 PF01475 Ferric uptake regulator family NtRootA4_28010 PF06628 Catalase-related immune-responsive NtRootA4_28010 PF00199 Catalase NtRootA4_28030 PF13520 Amino acid permease NtRootA4_28050 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_28050 PF00107 Zinc-binding dehydrogenase NtRootA4_28060 PF00171 Aldehyde dehydrogenase family NtRootA4_28080 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_28090 PF00892 EamA-like transporter family NtRootA4_28130 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_28140 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_28150 PF01842 ACT domain NtRootA4_28150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA4_28150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA4_28160 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_28170 PF02278 Polysaccharide lyase family 8, super-sandwich domain NtRootA4_28170 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NtRootA4_28170 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NtRootA4_28180 PF02278 Polysaccharide lyase family 8, super-sandwich domain NtRootA4_28180 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NtRootA4_28180 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NtRootA4_28190 PF00202 Aminotransferase class-III NtRootA4_28200 PF00171 Aldehyde dehydrogenase family NtRootA4_28210 PF13556 PucR C-terminal helix-turn-helix domain NtRootA4_28210 PF05651 Putative sugar diacid recognition NtRootA4_28210 PF17853 GGDEF-like domain NtRootA4_28220 PF07690 Major Facilitator Superfamily NtRootA4_28230 PF07729 FCD domain NtRootA4_28230 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_28240 PF00753 Metallo-beta-lactamase superfamily NtRootA4_28240 PF00581 Rhodanese-like domain NtRootA4_28250 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_28260 PF10414 Sirohaem synthase dimerisation region NtRootA4_28260 PF14824 Sirohaem biosynthesis protein central NtRootA4_28260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NtRootA4_28270 PF04960 Glutaminase NtRootA4_28280 PF00296 Luciferase-like monooxygenase NtRootA4_28330 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_28340 PF00005 ABC transporter NtRootA4_28360 PF02574 Homocysteine S-methyltransferase NtRootA4_28370 PF00009 Elongation factor Tu GTP binding domain NtRootA4_28380 PF01507 Phosphoadenosine phosphosulfate reductase family NtRootA4_28390 PF01507 Phosphoadenosine phosphosulfate reductase family NtRootA4_28400 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NtRootA4_28400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NtRootA4_28420 PF03458 UPF0126 domain NtRootA4_28450 PF00348 Polyprenyl synthetase NtRootA4_28460 PF01494 FAD binding domain NtRootA4_28470 PF01209 ubiE/COQ5 methyltransferase family NtRootA4_28480 PF00425 chorismate binding enzyme NtRootA4_28490 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA4_28500 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_28510 PF00005 ABC transporter NtRootA4_28530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA4_28550 PF13378 Enolase C-terminal domain-like NtRootA4_28550 PF18374 Enolase N-terminal domain-like NtRootA4_28590 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_28600 PF08244 Glycosyl hydrolases family 32 C terminal NtRootA4_28600 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootA4_28610 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_28620 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_28710 PF00082 Subtilase family NtRootA4_28710 PF04151 Bacterial pre-peptidase C-terminal domain NtRootA4_28770 PF02817 e3 binding domain NtRootA4_28770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootA4_28770 PF00364 Biotin-requiring enzyme NtRootA4_28780 PF02779 Transketolase, pyrimidine binding domain NtRootA4_28780 PF02780 Transketolase, C-terminal domain NtRootA4_28790 PF00676 Dehydrogenase E1 component NtRootA4_28820 PF02350 UDP-N-acetylglucosamine 2-epimerase NtRootA4_28840 PF00483 Nucleotidyl transferase NtRootA4_28850 PF16363 GDP-mannose 4,6 dehydratase NtRootA4_28860 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NtRootA4_28870 PF13614 AAA domain NtRootA4_28950 PF13439 Glycosyltransferase Family 4 NtRootA4_28950 PF00534 Glycosyl transferases group 1 NtRootA4_28970 PF02397 Bacterial sugar transferase NtRootA4_29050 PF00561 alpha/beta hydrolase fold NtRootA4_29070 PF02386 Cation transport protein NtRootA4_29080 PF03814 Potassium-transporting ATPase A subunit NtRootA4_29100 PF02669 K+-transporting ATPase, c chain NtRootA4_29110 PF00582 Universal stress protein family NtRootA4_29110 PF02702 Osmosensitive K+ channel His kinase sensor domain NtRootA4_29110 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_29110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_29110 PF13493 Domain of unknown function (DUF4118) NtRootA4_29120 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_29120 PF00072 Response regulator receiver domain NtRootA4_29160 PF01022 Bacterial regulatory protein, arsR family NtRootA4_29230 PF01047 MarR family NtRootA4_29240 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NtRootA4_29270 PF00743 Flavin-binding monooxygenase-like NtRootA4_29280 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_29280 PF00107 Zinc-binding dehydrogenase NtRootA4_29300 PF00248 Aldo/keto reductase family NtRootA4_29310 PF00248 Aldo/keto reductase family NtRootA4_29370 PF00378 Enoyl-CoA hydratase/isomerase NtRootA4_29380 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootA4_29380 PF00970 Oxidoreductase FAD-binding domain NtRootA4_29380 PF00175 Oxidoreductase NAD-binding domain NtRootA4_29390 PF01883 Iron-sulfur cluster assembly protein NtRootA4_29400 PF05138 Phenylacetic acid catabolic protein NtRootA4_29410 PF06243 Phenylacetic acid degradation B NtRootA4_29420 PF05138 Phenylacetic acid catabolic protein NtRootA4_29430 PF01451 Low molecular weight phosphotyrosine protein phosphatase NtRootA4_29440 PF05257 CHAP domain NtRootA4_29440 PF01476 LysM domain NtRootA4_29450 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_29450 PF00072 Response regulator receiver domain NtRootA4_29450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NtRootA4_29450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_29450 PF00672 HAMP domain NtRootA4_29450 PF01627 Hpt domain NtRootA4_29460 PF00990 Diguanylate cyclase, GGDEF domain NtRootA4_29490 PF13439 Glycosyltransferase Family 4 NtRootA4_29510 PF13439 Glycosyltransferase Family 4 NtRootA4_29510 PF00534 Glycosyl transferases group 1 NtRootA4_29520 PF00535 Glycosyl transferase family 2 NtRootA4_29530 PF00326 Prolyl oligopeptidase family NtRootA4_29530 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NtRootA4_29540 PF08241 Methyltransferase domain NtRootA4_29560 PF00672 HAMP domain NtRootA4_29560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_29560 PF18698 Histidine kinase sensor domain NtRootA4_29560 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_29560 PF00989 PAS fold NtRootA4_29590 PF00563 EAL domain NtRootA4_29590 PF00990 Diguanylate cyclase, GGDEF domain NtRootA4_29590 PF03707 Bacterial signalling protein N terminal repeat NtRootA4_29610 PF03061 Thioesterase superfamily NtRootA4_29620 PF14535 AMP-binding enzyme C-terminal domain NtRootA4_29620 PF00501 AMP-binding enzyme NtRootA4_29640 PF01575 MaoC like domain NtRootA4_29640 PF00171 Aldehyde dehydrogenase family NtRootA4_29650 PF13350 Tyrosine phosphatase family NtRootA4_29670 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootA4_29670 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootA4_29680 PF00378 Enoyl-CoA hydratase/isomerase NtRootA4_29690 PF02803 Thiolase, C-terminal domain NtRootA4_29690 PF00108 Thiolase, N-terminal domain NtRootA4_29710 PF01738 Dienelactone hydrolase family NtRootA4_29720 PF00324 Amino acid permease NtRootA4_29730 PF01566 Natural resistance-associated macrophage protein NtRootA4_29730 PF03358 NADPH-dependent FMN reductase NtRootA4_29740 PF02517 CPBP intramembrane metalloprotease NtRootA4_29760 PF00378 Enoyl-CoA hydratase/isomerase NtRootA4_29770 PF00501 AMP-binding enzyme NtRootA4_29770 PF13193 AMP-binding enzyme C-terminal domain NtRootA4_29780 PF01040 UbiA prenyltransferase family NtRootA4_29820 PF00350 Dynamin family NtRootA4_29830 PF00350 Dynamin family NtRootA4_29860 PF00012 Hsp70 protein NtRootA4_29870 PF01578 Cytochrome C assembly protein NtRootA4_29890 PF02683 Cytochrome C biogenesis protein transmembrane region NtRootA4_29900 PF00578 AhpC/TSA family NtRootA4_29910 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA4_29930 PF04264 YceI-like domain NtRootA4_29970 PF06971 Putative DNA-binding protein N-terminus NtRootA4_29970 PF02629 CoA binding domain NtRootA4_30010 PF12728 Helix-turn-helix domain NtRootA4_30020 PF00793 DAHP synthetase I family NtRootA4_30030 PF05448 Acetyl xylan esterase (AXE1) NtRootA4_30050 PF07690 Major Facilitator Superfamily NtRootA4_30070 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_30080 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_30100 PF08532 Beta-galactosidase trimerisation domain NtRootA4_30100 PF08533 Beta-galactosidase C-terminal domain NtRootA4_30100 PF02449 Beta-galactosidase NtRootA4_30110 PF01547 Bacterial extracellular solute-binding protein NtRootA4_30120 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_30130 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_30150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_30170 PF00171 Aldehyde dehydrogenase family NtRootA4_30180 PF13378 Enolase C-terminal domain-like NtRootA4_30180 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootA4_30190 PF00701 Dihydrodipicolinate synthetase family NtRootA4_30210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_30210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_30220 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_30230 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_30230 PF07729 FCD domain NtRootA4_30240 PF01070 FMN-dependent dehydrogenase NtRootA4_30250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NtRootA4_30250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NtRootA4_30260 PF01022 Bacterial regulatory protein, arsR family NtRootA4_30280 PF00850 Histone deacetylase domain NtRootA4_30290 PF02386 Cation transport protein NtRootA4_30300 PF02080 TrkA-C domain NtRootA4_30300 PF02254 TrkA-N domain NtRootA4_30310 PF03807 NADP oxidoreductase coenzyme F420-dependent NtRootA4_30310 PF14748 Pyrroline-5-carboxylate reductase dimerisation NtRootA4_30320 PF01261 Xylose isomerase-like TIM barrel NtRootA4_30330 PF02541 Ppx/GppA phosphatase family NtRootA4_30350 PF01131 DNA topoisomerase NtRootA4_30350 PF01751 Toprim domain NtRootA4_30350 PF13368 Topoisomerase C-terminal repeat NtRootA4_30400 PF00581 Rhodanese-like domain NtRootA4_30400 PF17773 UPF0176 acylphosphatase like domain NtRootA4_30400 PF12368 Rhodanase C-terminal NtRootA4_30420 PF00270 DEAD/DEAH box helicase NtRootA4_30420 PF09369 Domain of unknown function (DUF1998) NtRootA4_30420 PF00271 Helicase conserved C-terminal domain NtRootA4_30480 PF00437 Type II/IV secretion system protein NtRootA4_30500 PF01612 3'-5' exonuclease NtRootA4_30500 PF01367 5'-3' exonuclease, C-terminal SAM fold NtRootA4_30500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NtRootA4_30500 PF00476 DNA polymerase family A NtRootA4_30520 PF00293 NUDIX domain NtRootA4_30530 PF00633 Helix-hairpin-helix motif NtRootA4_30530 PF00730 HhH-GPD superfamily base excision DNA repair protein NtRootA4_30530 PF10576 Iron-sulfur binding domain of endonuclease III NtRootA4_30560 PF00501 AMP-binding enzyme NtRootA4_30560 PF16177 Acetyl-coenzyme A synthetase N-terminus NtRootA4_30560 PF13193 AMP-binding enzyme C-terminal domain NtRootA4_30570 PF00455 DeoR C terminal sensor domain NtRootA4_30570 PF08220 DeoR-like helix-turn-helix domain NtRootA4_30580 PF00005 ABC transporter NtRootA4_30580 PF02687 FtsX-like permease family NtRootA4_30580 PF12704 MacB-like periplasmic core domain NtRootA4_30600 PF13936 Helix-turn-helix domain NtRootA4_30600 PF00665 Integrase core domain NtRootA4_30610 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_30630 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_30640 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_30660 PF16874 Glycosyl hydrolase family 36 C-terminal domain NtRootA4_30660 PF16875 Glycosyl hydrolase family 36 N-terminal domain NtRootA4_30670 PF01220 Dehydroquinase class II NtRootA4_30680 PF02674 Colicin V production protein NtRootA4_30690 PF00027 Cyclic nucleotide-binding domain NtRootA4_30690 PF13545 Crp-like helix-turn-helix domain NtRootA4_30730 PF00905 Penicillin binding protein transpeptidase domain NtRootA4_30730 PF00912 Transglycosylase NtRootA4_30740 PF00149 Calcineurin-like phosphoesterase NtRootA4_30750 PF00664 ABC transporter transmembrane region NtRootA4_30750 PF00005 ABC transporter NtRootA4_30760 PF00664 ABC transporter transmembrane region NtRootA4_30760 PF00005 ABC transporter NtRootA4_30810 PF01259 SAICAR synthetase NtRootA4_30820 PF02843 Phosphoribosylglycinamide synthetase, C domain NtRootA4_30820 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NtRootA4_30820 PF02844 Phosphoribosylglycinamide synthetase, N domain NtRootA4_30850 PF00375 Sodium:dicarboxylate symporter family NtRootA4_30880 PF01177 Asp/Glu/Hydantoin racemase NtRootA4_30890 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NtRootA4_30900 PF00456 Transketolase, thiamine diphosphate binding domain NtRootA4_30900 PF17831 Pyruvate dehydrogenase E1 component middle domain NtRootA4_30920 PF12804 MobA-like NTP transferase domain NtRootA4_30930 PF00583 Acetyltransferase (GNAT) family NtRootA4_30940 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NtRootA4_30940 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NtRootA4_30960 PF13478 XdhC Rossmann domain NtRootA4_30960 PF02625 XdhC and CoxI family NtRootA4_30970 PF00860 Permease family NtRootA4_30980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootA4_30990 PF01979 Amidohydrolase family NtRootA4_31040 PF01014 Uricase NtRootA4_31050 PF00860 Permease family NtRootA4_31060 PF09339 IclR helix-turn-helix domain NtRootA4_31060 PF01614 Bacterial transcriptional regulator NtRootA4_31070 PF00390 Malic enzyme, N-terminal domain NtRootA4_31070 PF03949 Malic enzyme, NAD binding domain NtRootA4_31080 PF01274 Malate synthase NtRootA4_31100 PF07883 Cupin domain NtRootA4_31100 PF05899 Protein of unknown function (DUF861) NtRootA4_31130 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_31150 PF01547 Bacterial extracellular solute-binding protein NtRootA4_31160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_31160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_31170 PF00884 Sulfatase NtRootA4_31180 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_31190 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NtRootA4_31190 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NtRootA4_31190 PF02278 Polysaccharide lyase family 8, super-sandwich domain NtRootA4_31200 PF02661 Fic/DOC family NtRootA4_31220 PF04978 Protein of unknown function (DUF664) NtRootA4_31280 PF07690 Major Facilitator Superfamily NtRootA4_31310 PF00912 Transglycosylase NtRootA4_31310 PF00905 Penicillin binding protein transpeptidase domain NtRootA4_31330 PF07690 Major Facilitator Superfamily NtRootA4_31340 PF00909 Ammonium Transporter Family NtRootA4_31360 PF01740 STAS domain NtRootA4_31360 PF00916 Sulfate permease family NtRootA4_31400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_31400 PF03466 LysR substrate binding domain NtRootA4_31420 PF08267 Cobalamin-independent synthase, N-terminal domain NtRootA4_31420 PF01717 Cobalamin-independent synthase, Catalytic domain NtRootA4_31460 PF07690 Major Facilitator Superfamily NtRootA4_31480 PF01979 Amidohydrolase family NtRootA4_31490 PF03364 Polyketide cyclase / dehydrase and lipid transport NtRootA4_31500 PF18370 Rhamnogalacturonan I lyases beta-sheet domain NtRootA4_31500 PF01839 FG-GAP repeat NtRootA4_31510 PF00296 Luciferase-like monooxygenase NtRootA4_31530 PF07690 Major Facilitator Superfamily NtRootA4_31550 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_31560 PF00005 ABC transporter NtRootA4_31560 PF09383 NIL domain NtRootA4_31570 PF03180 NLPA lipoprotein NtRootA4_31580 PF00296 Luciferase-like monooxygenase NtRootA4_31670 PF12146 Serine aminopeptidase, S33 NtRootA4_31710 PF00005 ABC transporter NtRootA4_31710 PF00664 ABC transporter transmembrane region NtRootA4_31720 PF00005 ABC transporter NtRootA4_31720 PF00664 ABC transporter transmembrane region NtRootA4_31730 PF02525 Flavodoxin-like fold NtRootA4_31740 PF01638 HxlR-like helix-turn-helix NtRootA4_31750 PF01928 CYTH domain NtRootA4_31750 PF05235 CHAD domain NtRootA4_31760 PF03364 Polyketide cyclase / dehydrase and lipid transport NtRootA4_31830 PF02223 Thymidylate kinase NtRootA4_31860 PF00293 NUDIX domain NtRootA4_31860 PF13344 Haloacid dehalogenase-like hydrolase NtRootA4_32020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_32020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_32040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_32040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_32050 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_32060 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_32070 PF01547 Bacterial extracellular solute-binding protein NtRootA4_32080 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_32090 PF10137 Predicted nucleotide-binding protein containing TIR-like domain NtRootA4_32150 PF01261 Xylose isomerase-like TIM barrel NtRootA4_32160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootA4_32160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootA4_32170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA4_32170 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA4_32170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA4_32180 PF02595 Glycerate kinase family NtRootA4_32190 PF01979 Amidohydrolase family NtRootA4_32200 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_32200 PF00072 Response regulator receiver domain NtRootA4_32210 PF00578 AhpC/TSA family NtRootA4_32220 PF00072 Response regulator receiver domain NtRootA4_32220 PF00486 Transcriptional regulatory protein, C terminal NtRootA4_32230 PF07238 PilZ domain NtRootA4_32230 PF00535 Glycosyl transferase family 2 NtRootA4_32230 PF03552 Cellulose synthase NtRootA4_32240 PF01740 STAS domain NtRootA4_32260 PF00266 Aminotransferase class-V NtRootA4_32300 PF07690 Major Facilitator Superfamily NtRootA4_32310 PF01638 HxlR-like helix-turn-helix NtRootA4_32320 PF01569 PAP2 superfamily NtRootA4_32340 PF00576 HIUase/Transthyretin family NtRootA4_32350 PF13936 Helix-turn-helix domain NtRootA4_32350 PF00665 Integrase core domain NtRootA4_32370 PF00156 Phosphoribosyl transferase domain NtRootA4_32380 PF00586 AIR synthase related protein, N-terminal domain NtRootA4_32380 PF02769 AIR synthase related protein, C-terminal domain NtRootA4_32420 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA4_32420 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootA4_32420 PF02861 Clp amino terminal domain, pathogenicity island component NtRootA4_32420 PF17871 AAA lid domain NtRootA4_32420 PF07724 AAA domain (Cdc48 subfamily) NtRootA4_32440 PF03459 TOBE domain NtRootA4_32440 PF00005 ABC transporter NtRootA4_32450 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_32470 PF03459 TOBE domain NtRootA4_32480 PF07730 Histidine kinase NtRootA4_32490 PF00072 Response regulator receiver domain NtRootA4_32490 PF00196 Bacterial regulatory proteins, luxR family NtRootA4_32510 PF08031 Berberine and berberine like NtRootA4_32510 PF01565 FAD binding domain NtRootA4_32550 PF03733 Inner membrane component domain NtRootA4_32560 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NtRootA4_32570 PF05962 HutD NtRootA4_32580 PF00893 Small Multidrug Resistance protein NtRootA4_32590 PF00893 Small Multidrug Resistance protein NtRootA4_32600 PF00248 Aldo/keto reductase family NtRootA4_32610 PF00753 Metallo-beta-lactamase superfamily NtRootA4_32620 PF00270 DEAD/DEAH box helicase NtRootA4_32620 PF00271 Helicase conserved C-terminal domain NtRootA4_32630 PF07690 Major Facilitator Superfamily NtRootA4_32640 PF00376 MerR family regulatory protein NtRootA4_32640 PF09278 MerR, DNA binding NtRootA4_32650 PF05175 Methyltransferase small domain NtRootA4_32650 PF08468 Methyltransferase small domain N-terminal NtRootA4_32670 PF01546 Peptidase family M20/M25/M40 NtRootA4_32670 PF07687 Peptidase dimerisation domain NtRootA4_32680 PF00083 Sugar (and other) transporter NtRootA4_32690 PF07690 Major Facilitator Superfamily NtRootA4_32720 PF02390 Putative methyltransferase NtRootA4_32760 PF04542 Sigma-70 region 2 NtRootA4_32760 PF04545 Sigma-70, region 4 NtRootA4_32800 PF00176 SNF2 family N-terminal domain NtRootA4_32800 PF00271 Helicase conserved C-terminal domain NtRootA4_32800 PF04434 SWIM zinc finger NtRootA4_32830 PF07702 UTRA domain NtRootA4_32830 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_32900 PF00171 Aldehyde dehydrogenase family NtRootA4_32910 PF00175 Oxidoreductase NAD-binding domain NtRootA4_32910 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootA4_32930 PF12697 Alpha/beta hydrolase family NtRootA4_32950 PF00106 short chain dehydrogenase NtRootA4_32960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootA4_32960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootA4_32960 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootA4_32990 PF00355 Rieske [2Fe-2S] domain NtRootA4_33010 PF01047 MarR family NtRootA4_33020 PF01958 Domain of unknown function DUF108 NtRootA4_33020 PF03447 Homoserine dehydrogenase, NAD binding domain NtRootA4_33030 PF13411 MerR HTH family regulatory protein NtRootA4_33040 PF00684 DnaJ central domain NtRootA4_33040 PF00226 DnaJ domain NtRootA4_33040 PF01556 DnaJ C terminal domain NtRootA4_33050 PF01025 GrpE NtRootA4_33060 PF00012 Hsp70 protein NtRootA4_33070 PF05675 Protein of unknown function (DUF817) NtRootA4_33090 PF13305 Tetracyclin repressor-like, C-terminal domain NtRootA4_33090 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_33120 PF02311 AraC-like ligand binding domain NtRootA4_33120 PF12833 Helix-turn-helix domain NtRootA4_33150 PF09423 PhoD-like phosphatase NtRootA4_33150 PF16655 PhoD-like phosphatase, N-terminal domain NtRootA4_33160 PF05199 GMC oxidoreductase NtRootA4_33160 PF00732 GMC oxidoreductase NtRootA4_33170 PF14525 AraC-binding-like domain NtRootA4_33190 PF00155 Aminotransferase class I and II NtRootA4_33200 PF00107 Zinc-binding dehydrogenase NtRootA4_33200 PF08240 Alcohol dehydrogenase GroES-like domain NtRootA4_33230 PF13520 Amino acid permease NtRootA4_33250 PF01179 Copper amine oxidase, enzyme domain NtRootA4_33250 PF02728 Copper amine oxidase, N3 domain NtRootA4_33260 PF13977 BetI-type transcriptional repressor, C-terminal NtRootA4_33260 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_33270 PF01810 LysE type translocator NtRootA4_33280 PF00171 Aldehyde dehydrogenase family NtRootA4_33300 PF01842 ACT domain NtRootA4_33300 PF01817 Chorismate mutase type II NtRootA4_33300 PF00800 Prephenate dehydratase NtRootA4_33320 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_33330 PF01451 Low molecular weight phosphotyrosine protein phosphatase NtRootA4_33340 PF01758 Sodium Bile acid symporter family NtRootA4_33350 PF01022 Bacterial regulatory protein, arsR family NtRootA4_33370 PF03176 MMPL family NtRootA4_33390 PF08241 Methyltransferase domain NtRootA4_33400 PF03795 YCII-related domain NtRootA4_33410 PF08281 Sigma-70, region 4 NtRootA4_33410 PF04542 Sigma-70 region 2 NtRootA4_33420 PF00248 Aldo/keto reductase family NtRootA4_33450 PF11799 impB/mucB/samB family C-terminal domain NtRootA4_33450 PF00817 impB/mucB/samB family NtRootA4_33460 PF01810 LysE type translocator NtRootA4_33480 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_33490 PF01156 Inosine-uridine preferring nucleoside hydrolase NtRootA4_33500 PF07690 Major Facilitator Superfamily NtRootA4_33510 PF00294 pfkB family carbohydrate kinase NtRootA4_33540 PF01451 Low molecular weight phosphotyrosine protein phosphatase NtRootA4_33550 PF04715 Anthranilate synthase component I, N terminal region NtRootA4_33550 PF00117 Glutamine amidotransferase class-I NtRootA4_33550 PF00425 chorismate binding enzyme NtRootA4_33560 PF13091 PLD-like domain NtRootA4_33560 PF13396 Phospholipase_D-nuclease N-terminal NtRootA4_33580 PF00324 Amino acid permease NtRootA4_33590 PF02627 Carboxymuconolactone decarboxylase family NtRootA4_33600 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA4_33600 PF00571 CBS domain NtRootA4_33610 PF00221 Aromatic amino acid lyase NtRootA4_33620 PF00296 Luciferase-like monooxygenase NtRootA4_33650 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootA4_33670 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootA4_33690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NtRootA4_33700 PF08021 Siderophore-interacting FAD-binding domain NtRootA4_33700 PF04954 Siderophore-interacting protein NtRootA4_33700 PF00005 ABC transporter NtRootA4_33700 PF00664 ABC transporter transmembrane region NtRootA4_33710 PF01804 Penicillin amidase NtRootA4_33740 PF00005 ABC transporter NtRootA4_33750 PF09819 ABC-type cobalt transport system, permease component NtRootA4_33780 PF03334 Na+/H+ antiporter subunit NtRootA4_33790 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NtRootA4_33810 PF00361 Proton-conducting membrane transporter NtRootA4_33820 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NtRootA4_33830 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NtRootA4_33830 PF00361 Proton-conducting membrane transporter NtRootA4_33830 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NtRootA4_33830 PF13244 Domain of unknown function (DUF4040) NtRootA4_33860 PF00999 Sodium/hydrogen exchanger family NtRootA4_33880 PF00692 dUTPase NtRootA4_33910 PF02557 D-alanyl-D-alanine carboxypeptidase NtRootA4_33930 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NtRootA4_33930 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NtRootA4_33940 PF05977 Transmembrane secretion effector NtRootA4_33950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_33950 PF03466 LysR substrate binding domain NtRootA4_33960 PF16363 GDP-mannose 4,6 dehydratase NtRootA4_33970 PF01022 Bacterial regulatory protein, arsR family NtRootA4_34000 PF01261 Xylose isomerase-like TIM barrel NtRootA4_34010 PF07859 alpha/beta hydrolase fold NtRootA4_34010 PF13472 GDSL-like Lipase/Acylhydrolase family NtRootA4_34020 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_34030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_34030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_34070 PF03631 Virulence factor BrkB NtRootA4_34080 PF00480 ROK family NtRootA4_34090 PF01261 Xylose isomerase-like TIM barrel NtRootA4_34100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootA4_34100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootA4_34110 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_34120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootA4_34120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootA4_34130 PF00596 Class II Aldolase and Adducin N-terminal domain NtRootA4_34140 PF11762 L-arabinose isomerase C-terminal domain NtRootA4_34140 PF02610 L-arabinose isomerase NtRootA4_34150 PF01263 Aldose 1-epimerase NtRootA4_34160 PF00135 Carboxylesterase family NtRootA4_34180 PF00480 ROK family NtRootA4_34180 PF01047 MarR family NtRootA4_34200 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_34210 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_34220 PF00005 ABC transporter NtRootA4_34240 PF01042 Endoribonuclease L-PSP NtRootA4_34270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_34270 PF03466 LysR substrate binding domain NtRootA4_34300 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_34310 PF05336 L-rhamnose mutarotase NtRootA4_34330 PF00596 Class II Aldolase and Adducin N-terminal domain NtRootA4_34340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootA4_34340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootA4_34350 PF02261 Aspartate decarboxylase NtRootA4_34370 PF00723 Glycosyl hydrolases family 15 NtRootA4_34380 PF00296 Luciferase-like monooxygenase NtRootA4_34390 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootA4_34400 PF13291 ACT domain NtRootA4_34400 PF00291 Pyridoxal-phosphate dependent enzyme NtRootA4_34440 PF00296 Luciferase-like monooxygenase NtRootA4_34450 PF00296 Luciferase-like monooxygenase NtRootA4_34470 PF00296 Luciferase-like monooxygenase NtRootA4_34490 PF00005 ABC transporter NtRootA4_34500 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_34530 PF05872 Bacterial protein of unknown function (DUF853) NtRootA4_34550 PF00578 AhpC/TSA family NtRootA4_34550 PF02683 Cytochrome C biogenesis protein transmembrane region NtRootA4_34550 PF17991 Thioredoxin like C-terminal domain NtRootA4_34560 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) NtRootA4_34560 PF05425 Copper resistance protein D NtRootA4_34570 PF00216 Bacterial DNA-binding protein NtRootA4_34600 PF08281 Sigma-70, region 4 NtRootA4_34600 PF04542 Sigma-70 region 2 NtRootA4_34600 PF12680 SnoaL-like domain NtRootA4_34620 PF00253 Ribosomal protein S14p/S29e NtRootA4_34630 PF00471 Ribosomal protein L33 NtRootA4_34640 PF00830 Ribosomal L28 family NtRootA4_34650 PF00970 Oxidoreductase FAD-binding domain NtRootA4_34650 PF00042 Globin NtRootA4_34650 PF00175 Oxidoreductase NAD-binding domain NtRootA4_34730 PF04954 Siderophore-interacting protein NtRootA4_34730 PF08021 Siderophore-interacting FAD-binding domain NtRootA4_34740 PF00005 ABC transporter NtRootA4_34750 PF01032 FecCD transport family NtRootA4_34760 PF01032 FecCD transport family NtRootA4_34830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA4_34830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA4_34830 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA4_34860 PF01613 Flavin reductase like domain NtRootA4_34870 PF00248 Aldo/keto reductase family NtRootA4_34950 PF07729 FCD domain NtRootA4_34950 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_34970 PF00206 Lyase NtRootA4_34970 PF10415 Fumarase C C-terminus NtRootA4_34980 PF00324 Amino acid permease NtRootA4_34990 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_34990 PF07729 FCD domain NtRootA4_35010 PF00248 Aldo/keto reductase family NtRootA4_35020 PF05336 L-rhamnose mutarotase NtRootA4_35040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootA4_35040 PF13378 Enolase C-terminal domain-like NtRootA4_35050 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA4_35080 PF17862 AAA+ lid domain NtRootA4_35080 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA4_35080 PF01434 Peptidase family M41 NtRootA4_35080 PF06480 FtsH Extracellular NtRootA4_35100 PF13291 ACT domain NtRootA4_35100 PF04607 Region found in RelA / SpoT proteins NtRootA4_35100 PF02824 TGS domain NtRootA4_35110 PF00106 short chain dehydrogenase NtRootA4_35120 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_35120 PF02909 Tetracyclin repressor-like, C-terminal domain NtRootA4_35130 PF00144 Beta-lactamase NtRootA4_35140 PF00749 tRNA synthetases class I (E and Q), catalytic domain NtRootA4_35180 PF01037 Lrp/AsnC ligand binding domain NtRootA4_35190 PF01810 LysE type translocator NtRootA4_35210 PF01022 Bacterial regulatory protein, arsR family NtRootA4_35250 PF13936 Helix-turn-helix domain NtRootA4_35250 PF00665 Integrase core domain NtRootA4_35260 PF00295 Glycosyl hydrolases family 28 NtRootA4_35270 PF13936 Helix-turn-helix domain NtRootA4_35270 PF00665 Integrase core domain NtRootA4_35280 PF09339 IclR helix-turn-helix domain NtRootA4_35280 PF01614 Bacterial transcriptional regulator NtRootA4_35290 PF00557 Metallopeptidase family M24 NtRootA4_35290 PF01321 Creatinase/Prolidase N-terminal domain NtRootA4_35300 PF08946 Osmosensory transporter coiled coil NtRootA4_35300 PF00083 Sugar (and other) transporter NtRootA4_35310 PF07729 FCD domain NtRootA4_35310 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_35320 PF00464 Serine hydroxymethyltransferase NtRootA4_35330 PF01266 FAD dependent oxidoreductase NtRootA4_35340 PF04267 Sarcosine oxidase, delta subunit family NtRootA4_35350 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA4_35350 PF01571 Aminomethyltransferase folate-binding domain NtRootA4_35350 PF17806 Sarcosine oxidase A3 domain NtRootA4_35350 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_35360 PF04268 Sarcosine oxidase, gamma subunit family NtRootA4_35370 PF03313 Serine dehydratase alpha chain NtRootA4_35370 PF03315 Serine dehydratase beta chain NtRootA4_35380 PF00551 Formyl transferase NtRootA4_35410 PF01522 Polysaccharide deacetylase NtRootA4_35420 PF00665 Integrase core domain NtRootA4_35420 PF13936 Helix-turn-helix domain NtRootA4_35440 PF00390 Malic enzyme, N-terminal domain NtRootA4_35440 PF03949 Malic enzyme, NAD binding domain NtRootA4_35450 PF17925 Tetracyclin repressor-like, C-terminal domain NtRootA4_35450 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_35500 PF03737 Aldolase/RraA NtRootA4_35510 PF07690 Major Facilitator Superfamily NtRootA4_35520 PF00083 Sugar (and other) transporter NtRootA4_35530 PF07690 Major Facilitator Superfamily NtRootA4_35540 PF01047 MarR family NtRootA4_35580 PF13732 Domain of unknown function (DUF4162) NtRootA4_35580 PF00005 ABC transporter NtRootA4_35600 PF00324 Amino acid permease NtRootA4_35610 PF01232 Mannitol dehydrogenase Rossmann domain NtRootA4_35610 PF08125 Mannitol dehydrogenase C-terminal domain NtRootA4_35620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NtRootA4_35620 PF02378 Phosphotransferase system, EIIC NtRootA4_35620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NtRootA4_35640 PF00391 PEP-utilising enzyme, mobile domain NtRootA4_35640 PF05524 PEP-utilising enzyme, N-terminal NtRootA4_35640 PF02896 PEP-utilising enzyme, TIM barrel domain NtRootA4_35680 PF00561 alpha/beta hydrolase fold NtRootA4_35700 PF04679 ATP dependent DNA ligase C terminal region NtRootA4_35700 PF01068 ATP dependent DNA ligase domain NtRootA4_35740 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NtRootA4_35740 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NtRootA4_35780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_35780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_35800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootA4_35800 PF00005 ABC transporter NtRootA4_35810 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootA4_35810 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_35820 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_35830 PF00440 Bacterial regulatory proteins, tetR family NtRootA4_35830 PF17925 Tetracyclin repressor-like, C-terminal domain NtRootA4_35840 PF03358 NADPH-dependent FMN reductase NtRootA4_35890 PF00155 Aminotransferase class I and II NtRootA4_35930 PF02817 e3 binding domain NtRootA4_35930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootA4_35930 PF00364 Biotin-requiring enzyme NtRootA4_35940 PF02780 Transketolase, C-terminal domain NtRootA4_35940 PF02779 Transketolase, pyrimidine binding domain NtRootA4_35950 PF00676 Dehydrogenase E1 component NtRootA4_35960 PF00155 Aminotransferase class I and II NtRootA4_35970 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NtRootA4_36000 PF00206 Lyase NtRootA4_36000 PF08328 Adenylosuccinate lyase C-terminal NtRootA4_36030 PF03061 Thioesterase superfamily NtRootA4_36040 PF00106 short chain dehydrogenase NtRootA4_36050 PF00083 Sugar (and other) transporter NtRootA4_36050 PF08946 Osmosensory transporter coiled coil NtRootA4_36060 PF02626 Carboxyltransferase domain, subdomain A and B NtRootA4_36070 PF02682 Carboxyltransferase domain, subdomain C and D NtRootA4_36080 PF03746 LamB/YcsF family NtRootA4_36090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_36090 PF03466 LysR substrate binding domain NtRootA4_36110 PF03737 Aldolase/RraA NtRootA4_36120 PF00155 Aminotransferase class I and II NtRootA4_36160 PF03328 HpcH/HpaI aldolase/citrate lyase family NtRootA4_36170 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA4_36180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootA4_36190 PF00171 Aldehyde dehydrogenase family NtRootA4_36200 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_36200 PF07729 FCD domain NtRootA4_36210 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA4_36240 PF04226 Transglycosylase associated protein NtRootA4_36270 PF06445 GyrI-like small molecule binding domain NtRootA4_36270 PF12833 Helix-turn-helix domain NtRootA4_36310 PF06724 Domain of Unknown Function (DUF1206) NtRootA4_36340 PF03780 Asp23 family, cell envelope-related function NtRootA4_36400 PF04542 Sigma-70 region 2 NtRootA4_36400 PF08281 Sigma-70, region 4 NtRootA4_36440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_36440 PF00512 His Kinase A (phospho-acceptor) domain NtRootA4_36450 PF03793 PASTA domain NtRootA4_36450 PF00069 Protein kinase domain NtRootA4_36460 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA4_36490 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NtRootA4_36500 PF00723 Glycosyl hydrolases family 15 NtRootA4_36520 PF00282 Pyridoxal-dependent decarboxylase conserved domain NtRootA4_36540 PF13419 Haloacid dehalogenase-like hydrolase NtRootA4_36570 PF01494 FAD binding domain NtRootA4_36580 PF01614 Bacterial transcriptional regulator NtRootA4_36580 PF09339 IclR helix-turn-helix domain NtRootA4_36590 PF07690 Major Facilitator Superfamily NtRootA4_36650 PF04226 Transglycosylase associated protein NtRootA4_36660 PF00069 Protein kinase domain NtRootA4_36660 PF03793 PASTA domain NtRootA4_36680 PF01047 MarR family NtRootA4_36740 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NtRootA4_36740 PF04055 Radical SAM superfamily NtRootA4_36750 PF03313 Serine dehydratase alpha chain NtRootA4_36750 PF03315 Serine dehydratase beta chain NtRootA4_36760 PF00464 Serine hydroxymethyltransferase NtRootA4_36770 PF01597 Glycine cleavage H-protein NtRootA4_36780 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA4_36780 PF01571 Aminomethyltransferase folate-binding domain NtRootA4_36790 PF02347 Glycine cleavage system P-protein NtRootA4_36800 PF13556 PucR C-terminal helix-turn-helix domain NtRootA4_36810 PF00083 Sugar (and other) transporter NtRootA4_36820 PF00491 Arginase family NtRootA4_36830 PF01741 Large-conductance mechanosensitive channel, MscL NtRootA4_36880 PF02233 NAD(P) transhydrogenase beta subunit NtRootA4_36890 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NtRootA4_36900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NtRootA4_36900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NtRootA4_36910 PF03358 NADPH-dependent FMN reductase NtRootA4_37140 PF13419 Haloacid dehalogenase-like hydrolase NtRootA4_37160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA4_37160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA4_37210 PF13936 Helix-turn-helix domain NtRootA4_37210 PF00665 Integrase core domain NtRootA4_37220 PF07690 Major Facilitator Superfamily NtRootA4_37230 PF01494 FAD binding domain NtRootA4_37240 PF00501 AMP-binding enzyme NtRootA4_37240 PF13193 AMP-binding enzyme C-terminal domain NtRootA4_37270 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA4_37280 PF01042 Endoribonuclease L-PSP NtRootA4_37300 PF09339 IclR helix-turn-helix domain NtRootA4_37300 PF01614 Bacterial transcriptional regulator NtRootA4_37310 PF01144 Coenzyme A transferase NtRootA4_37320 PF01144 Coenzyme A transferase NtRootA4_37330 PF02803 Thiolase, C-terminal domain NtRootA4_37330 PF00108 Thiolase, N-terminal domain NtRootA4_37340 PF02627 Carboxymuconolactone decarboxylase family NtRootA4_37350 PF08386 TAP-like protein NtRootA4_37350 PF00561 alpha/beta hydrolase fold NtRootA4_37360 PF10397 Adenylosuccinate lyase C-terminus NtRootA4_37360 PF00206 Lyase NtRootA4_37370 PF00775 Dioxygenase NtRootA4_37370 PF04444 Catechol dioxygenase N terminus NtRootA4_37380 PF00775 Dioxygenase NtRootA4_37380 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NtRootA4_37390 PF01261 Xylose isomerase-like TIM barrel NtRootA4_37390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootA4_37400 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NtRootA4_37400 PF08501 Shikimate dehydrogenase substrate binding domain NtRootA4_37410 PF01614 Bacterial transcriptional regulator NtRootA4_37410 PF09339 IclR helix-turn-helix domain NtRootA4_37420 PF00083 Sugar (and other) transporter NtRootA4_37450 PF02597 ThiS family NtRootA4_37470 PF05230 MASE2 domain NtRootA4_37470 PF00990 Diguanylate cyclase, GGDEF domain NtRootA4_37500 PF07690 Major Facilitator Superfamily NtRootA4_37510 PF14310 Fibronectin type III-like domain NtRootA4_37510 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA4_37510 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootA4_37510 PF07691 PA14 domain NtRootA4_37530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootA4_37530 PF03466 LysR substrate binding domain NtRootA4_37600 PF02447 GntP family permease NtRootA4_37610 PF01081 KDPG and KHG aldolase NtRootA4_37620 PF07969 Amidohydrolase family NtRootA4_37640 PF00294 pfkB family carbohydrate kinase NtRootA4_37650 PF09339 IclR helix-turn-helix domain NtRootA4_37650 PF01614 Bacterial transcriptional regulator NtRootA4_37660 PF01042 Endoribonuclease L-PSP NtRootA4_37670 PF00535 Glycosyl transferase family 2 NtRootA4_37670 PF00795 Carbon-nitrogen hydrolase NtRootA4_37750 PF03976 Polyphosphate kinase 2 (PPK2) NtRootA4_37770 PF01418 Helix-turn-helix domain, rpiR family NtRootA4_37770 PF01380 SIS domain NtRootA4_37780 PF07075 Protein of unknown function (DUF1343) NtRootA4_37790 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA4_37790 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootA4_37830 PF02583 Metal-sensitive transcriptional repressor NtRootA4_37840 PF00403 Heavy-metal-associated domain NtRootA4_37850 PF00403 Heavy-metal-associated domain NtRootA4_37950 PF01554 MatE NtRootA4_37970 PF07681 DoxX NtRootA4_38000 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootA4_38000 PF00391 PEP-utilising enzyme, mobile domain NtRootA4_38020 PF03061 Thioesterase superfamily NtRootA4_38050 PF02779 Transketolase, pyrimidine binding domain NtRootA4_38050 PF02780 Transketolase, C-terminal domain NtRootA4_38060 PF00456 Transketolase, thiamine diphosphate binding domain NtRootA4_38070 PF00083 Sugar (and other) transporter NtRootA4_38100 PF02733 Dak1 domain NtRootA4_38100 PF02734 DAK2 domain NtRootA4_38110 PF02502 Ribose/Galactose Isomerase NtRootA4_38140 PF00772 DnaB-like helicase N terminal domain NtRootA4_38140 PF03796 DnaB-like helicase C terminal domain NtRootA4_38180 PF03358 NADPH-dependent FMN reductase NtRootA4_38200 PF00135 Carboxylesterase family NtRootA4_38220 PF02515 CoA-transferase family III NtRootA4_38230 PF00682 HMGL-like NtRootA4_38300 PF00005 ABC transporter NtRootA4_38320 PF02567 Phenazine biosynthesis-like protein NtRootA4_38340 PF13936 Helix-turn-helix domain NtRootA4_38340 PF00665 Integrase core domain NtRootA4_38350 PF03948 Ribosomal protein L9, C-terminal domain NtRootA4_38350 PF01281 Ribosomal protein L9, N-terminal domain NtRootA4_38360 PF01084 Ribosomal protein S18 NtRootA4_38370 PF00436 Single-strand binding protein family NtRootA4_38380 PF01250 Ribosomal protein S6 NtRootA4_38410 PF00324 Amino acid permease NtRootA4_38420 PF02127 Aminopeptidase I zinc metalloprotease (M18) NtRootA4_38480 PF00842 Alanine racemase, C-terminal domain NtRootA4_38480 PF01168 Alanine racemase, N-terminal domain NtRootA4_38490 PF00324 Amino acid permease NtRootA4_38500 PF00196 Bacterial regulatory proteins, luxR family NtRootA4_38500 PF00072 Response regulator receiver domain NtRootA4_38510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_38510 PF07730 Histidine kinase NtRootA4_38530 PF00005 ABC transporter NtRootA4_38540 PF00781 Diacylglycerol kinase catalytic domain NtRootA4_38560 PF07690 Major Facilitator Superfamily NtRootA4_38570 PF00455 DeoR C terminal sensor domain NtRootA4_38570 PF08220 DeoR-like helix-turn-helix domain NtRootA4_38580 PF12848 ABC transporter NtRootA4_38580 PF00005 ABC transporter NtRootA4_38590 PF01494 FAD binding domain NtRootA4_38600 PF00905 Penicillin binding protein transpeptidase domain NtRootA4_38610 PF16338 Domain of unknown function (DUF4968) NtRootA4_38610 PF17137 Domain of unknown function (DUF5110) NtRootA4_38610 PF01055 Glycosyl hydrolases family 31 NtRootA4_38620 PF00196 Bacterial regulatory proteins, luxR family NtRootA4_38620 PF00072 Response regulator receiver domain NtRootA4_38630 PF07730 Histidine kinase NtRootA4_38650 PF00005 ABC transporter NtRootA4_38660 PF01638 HxlR-like helix-turn-helix NtRootA4_38670 PF13460 NAD(P)H-binding NtRootA4_38710 PF00300 Histidine phosphatase superfamily (branch 1) NtRootA4_38720 PF01966 HD domain NtRootA4_38720 PF01743 Poly A polymerase head domain NtRootA4_38720 PF12627 Probable RNA and SrmB- binding site of polymerase A NtRootA4_38730 PF00293 NUDIX domain NtRootA4_38740 PF03023 Lipid II flippase MurJ NtRootA4_38760 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootA4_38770 PF00085 Thioredoxin NtRootA4_38800 PF02195 ParB-like nuclease domain NtRootA4_38800 PF17762 HTH domain found in ParB protein NtRootA4_38810 PF13614 AAA domain NtRootA4_38820 PF02527 rRNA small subunit methyltransferase G NtRootA4_38840 PF02096 60Kd inner membrane protein NtRootA4_38850 PF01809 Putative membrane protein insertion efficiency factor NtRootA4_38860 PF00825 Ribonuclease P NtRootA4_38870 PF00468 Ribosomal protein L34 NtRootA4_38880 PF08299 Bacterial dnaA protein helix-turn-helix NtRootA4_38880 PF00308 Bacterial dnaA protein NtRootA4_38890 PF00712 DNA polymerase III beta subunit, N-terminal domain NtRootA4_38890 PF02767 DNA polymerase III beta subunit, central domain NtRootA4_38890 PF02768 DNA polymerase III beta subunit, C-terminal domain NtRootA4_38900 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NtRootA4_38900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootA4_38910 PF02463 RecF/RecN/SMC N terminal domain NtRootA4_38920 PF05258 Dna[CI] antecedent, DciA NtRootA4_38930 PF00204 DNA gyrase B NtRootA4_38930 PF00986 DNA gyrase B subunit, carboxyl terminus NtRootA4_38930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_38930 PF01751 Toprim domain NtRootA4_38940 PF03989 DNA gyrase C-terminal domain, beta-propeller NtRootA4_38940 PF00521 DNA gyrase/topoisomerase IV, subunit A NtRootA4_38960 PF12089 Transmembrane domain of unknown function (DUF3566) NtRootA4_39000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NtRootA4_39010 PF01694 Rhomboid family NtRootA4_39030 PF03352 Methyladenine glycosylase NtRootA4_39050 PF02805 Metal binding domain of Ada NtRootA4_39050 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NtRootA4_39050 PF12833 Helix-turn-helix domain NtRootA4_39050 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NtRootA4_39060 PF04542 Sigma-70 region 2 NtRootA4_39060 PF04545 Sigma-70, region 4 NtRootA4_39070 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NtRootA4_39070 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NtRootA4_39080 PF06781 Cell division protein CrgA NtRootA4_39090 PF04203 Sortase domain NtRootA4_39100 PF00117 Glutamine amidotransferase class-I NtRootA4_39110 PF00069 Protein kinase domain NtRootA4_39110 PF03793 PASTA domain NtRootA4_39120 PF00069 Protein kinase domain NtRootA4_39130 PF00905 Penicillin binding protein transpeptidase domain NtRootA4_39140 PF01098 Cell cycle protein NtRootA4_39160 PF16697 Inner membrane component of T3SS, cytoplasmic domain NtRootA4_39170 PF12401 Protein of unknown function (DUF2662) NtRootA4_39170 PF00498 FHA domain NtRootA4_39180 PF07729 FCD domain NtRootA4_39180 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_39190 PF13378 Enolase C-terminal domain-like NtRootA4_39190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootA4_39210 PF12146 Serine aminopeptidase, S33 NtRootA4_39220 PF01425 Amidase NtRootA4_39260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootA4_39260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootA4_39260 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootA4_39290 PF07690 Major Facilitator Superfamily NtRootA4_39300 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NtRootA4_39330 PF01593 Flavin containing amine oxidoreductase NtRootA4_39340 PF00582 Universal stress protein family NtRootA4_39370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootA4_39410 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_39410 PF07729 FCD domain NtRootA4_39420 PF03746 LamB/YcsF family NtRootA4_39430 PF00083 Sugar (and other) transporter NtRootA4_39430 PF07690 Major Facilitator Superfamily NtRootA4_39440 PF02682 Carboxyltransferase domain, subdomain C and D NtRootA4_39450 PF02785 Biotin carboxylase C-terminal domain NtRootA4_39450 PF00289 Biotin carboxylase, N-terminal domain NtRootA4_39450 PF00364 Biotin-requiring enzyme NtRootA4_39450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootA4_39460 PF00480 ROK family NtRootA4_39470 PF13416 Bacterial extracellular solute-binding protein NtRootA4_39490 PF14785 Maltose transport system permease protein MalF P2 domain NtRootA4_39490 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_39500 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_39520 PF00480 ROK family NtRootA4_39530 PF00884 Sulfatase NtRootA4_39530 PF16385 Domain of unknown function NtRootA4_39550 PF03932 CutC family NtRootA4_39560 PF01565 FAD binding domain NtRootA4_39560 PF04030 D-arabinono-1,4-lactone oxidase NtRootA4_39570 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_39580 PF01638 HxlR-like helix-turn-helix NtRootA4_39600 PF01758 Sodium Bile acid symporter family NtRootA4_39610 PF01740 STAS domain NtRootA4_39610 PF00916 Sulfate permease family NtRootA4_39640 PF00294 pfkB family carbohydrate kinase NtRootA4_39650 PF13409 Glutathione S-transferase, N-terminal domain NtRootA4_39700 PF03009 Glycerophosphoryl diester phosphodiesterase family NtRootA4_39710 PF02837 Glycosyl hydrolases family 2, sugar binding domain NtRootA4_39710 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NtRootA4_39710 PF00703 Glycosyl hydrolases family 2 NtRootA4_39710 PF16353 Domain of unknown function(DUF4981) NtRootA4_39710 PF02929 Beta galactosidase small chain NtRootA4_39720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootA4_39720 PF01842 ACT domain NtRootA4_39720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootA4_39730 PF02595 Glycerate kinase family NtRootA4_39740 PF10944 Protein of unknown function (DUF2630) NtRootA4_39830 PF04294 VanW like protein NtRootA4_39860 PF02586 SOS response associated peptidase (SRAP) NtRootA4_39890 PF01965 DJ-1/PfpI family NtRootA4_39910 PF00005 ABC transporter NtRootA4_39930 PF00196 Bacterial regulatory proteins, luxR family NtRootA4_39930 PF00072 Response regulator receiver domain NtRootA4_39940 PF07730 Histidine kinase NtRootA4_39940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootA4_39970 PF00860 Permease family NtRootA4_39990 PF00881 Nitroreductase family NtRootA4_40010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootA4_40010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootA4_40010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootA4_40010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootA4_40030 PF00854 POT family NtRootA4_40040 PF01425 Amidase NtRootA4_40050 PF03575 Peptidase family S51 NtRootA4_40060 PF01206 Sulfurtransferase TusA NtRootA4_40060 PF00581 Rhodanese-like domain NtRootA4_40070 PF01842 ACT domain NtRootA4_40070 PF00800 Prephenate dehydratase NtRootA4_40090 PF00781 Diacylglycerol kinase catalytic domain NtRootA4_40100 PF02403 Seryl-tRNA synthetase N-terminal domain NtRootA4_40100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootA4_40110 PF13649 Methyltransferase domain NtRootA4_40120 PF13538 UvrD-like helicase C-terminal domain NtRootA4_40150 PF04539 Sigma-70 region 3 NtRootA4_40150 PF04542 Sigma-70 region 2 NtRootA4_40150 PF04545 Sigma-70, region 4 NtRootA4_40260 PF00719 Inorganic pyrophosphatase NtRootA4_40270 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NtRootA4_40290 PF09179 TilS substrate binding domain NtRootA4_40290 PF01171 PP-loop family NtRootA4_40300 PF00156 Phosphoribosyl transferase domain NtRootA4_40320 PF17862 AAA+ lid domain NtRootA4_40320 PF01434 Peptidase family M41 NtRootA4_40320 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA4_40330 PF01227 GTP cyclohydrolase I NtRootA4_40340 PF00809 Pterin binding enzyme NtRootA4_40350 PF02152 Dihydroneopterin aldolase NtRootA4_40360 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NtRootA4_40410 PF02569 Pantoate-beta-alanine ligase NtRootA4_40430 PF07690 Major Facilitator Superfamily NtRootA4_40480 PF01336 OB-fold nucleic acid binding domain NtRootA4_40480 PF00152 tRNA synthetases class II (D, K and N) NtRootA4_40500 PF11774 Lsr2 NtRootA4_40510 PF17871 AAA lid domain NtRootA4_40510 PF02861 Clp amino terminal domain, pathogenicity island component NtRootA4_40510 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootA4_40510 PF07724 AAA domain (Cdc48 subfamily) NtRootA4_40510 PF00004 ATPase family associated with various cellular activities (AAA) NtRootA4_40520 PF03033 Glycosyltransferase family 28 N-terminal domain NtRootA4_40530 PF00326 Prolyl oligopeptidase family NtRootA4_40530 PF07676 WD40-like Beta Propeller Repeat NtRootA4_40530 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NtRootA4_40540 PF00583 Acetyltransferase (GNAT) family NtRootA4_40550 PF08031 Berberine and berberine like NtRootA4_40550 PF01565 FAD binding domain NtRootA4_40570 PF02733 Dak1 domain NtRootA4_40580 PF02734 DAK2 domain NtRootA4_40590 PF03610 PTS system fructose IIA component NtRootA4_40650 PF08376 Nitrate and nitrite sensing NtRootA4_40650 PF03861 ANTAR domain NtRootA4_40670 PF00375 Sodium:dicarboxylate symporter family NtRootA4_40690 PF00730 HhH-GPD superfamily base excision DNA repair protein NtRootA4_40690 PF00633 Helix-hairpin-helix motif NtRootA4_40710 PF02457 DisA bacterial checkpoint controller nucleotide-binding NtRootA4_40710 PF10635 DisA bacterial checkpoint controller linker region NtRootA4_40710 PF00633 Helix-hairpin-helix motif NtRootA4_40730 PF18073 Rubredoxin metal binding domain NtRootA4_40740 PF01569 PAP2 superfamily NtRootA4_40760 PF12849 PBP superfamily domain NtRootA4_40770 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_40780 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_40790 PF00005 ABC transporter NtRootA4_40840 PF01384 Phosphate transporter family NtRootA4_40890 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NtRootA4_40910 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_40920 PF14031 Putative serine dehydratase domain NtRootA4_40950 PF00547 Urease, gamma subunit NtRootA4_40960 PF00699 Urease beta subunit NtRootA4_40970 PF01979 Amidohydrolase family NtRootA4_40970 PF00449 Urease alpha-subunit, N-terminal domain NtRootA4_40980 PF05194 UreE urease accessory protein, C-terminal domain NtRootA4_40980 PF02814 UreE urease accessory protein, N-terminal domain NtRootA4_40990 PF01730 UreF NtRootA4_41000 PF02492 CobW/HypB/UreG, nucleotide-binding domain NtRootA4_41010 PF01774 UreD urease accessory protein NtRootA4_41020 PF03824 High-affinity nickel-transport protein NtRootA4_41060 PF00583 Acetyltransferase (GNAT) family NtRootA4_41070 PF00128 Alpha amylase, catalytic domain NtRootA4_41070 PF02806 Alpha amylase, C-terminal all-beta domain NtRootA4_41070 PF03714 Bacterial pullanase-associated domain NtRootA4_41110 PF10282 Lactonase, 7-bladed beta-propeller NtRootA4_41120 PF00248 Aldo/keto reductase family NtRootA4_41130 PF17762 HTH domain found in ParB protein NtRootA4_41130 PF02195 ParB-like nuclease domain NtRootA4_41170 PF00436 Single-strand binding protein family NtRootA4_41250 PF04294 VanW like protein NtRootA4_41320 PF02156 Glycosyl hydrolase family 26 NtRootA4_41360 PF07729 FCD domain NtRootA4_41360 PF00392 Bacterial regulatory proteins, gntR family NtRootA4_41370 PF00005 ABC transporter NtRootA4_41380 PF02653 Branched-chain amino acid transport system / permease component NtRootA4_41390 PF02653 Branched-chain amino acid transport system / permease component NtRootA4_41410 PF00665 Integrase core domain NtRootA4_41410 PF13936 Helix-turn-helix domain NtRootA4_41440 PF05199 GMC oxidoreductase NtRootA4_41440 PF00732 GMC oxidoreductase NtRootA4_41450 PF00171 Aldehyde dehydrogenase family NtRootA4_41460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootA4_41460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootA4_41500 PF02595 Glycerate kinase family NtRootA4_41520 PF00271 Helicase conserved C-terminal domain NtRootA4_41570 PF02899 Phage integrase, N-terminal SAM-like domain NtRootA4_41570 PF00589 Phage integrase family NtRootA4_41580 PF02899 Phage integrase, N-terminal SAM-like domain NtRootA4_41580 PF00589 Phage integrase family NtRootA4_41620 PF03358 NADPH-dependent FMN reductase NtRootA4_41640 PF01593 Flavin containing amine oxidoreductase NtRootA4_41670 PF00171 Aldehyde dehydrogenase family NtRootA4_41680 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootA4_41690 PF00893 Small Multidrug Resistance protein NtRootA4_41700 PF00893 Small Multidrug Resistance protein NtRootA4_41710 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NtRootA4_41710 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NtRootA4_41720 PF01266 FAD dependent oxidoreductase NtRootA4_41720 PF16350 FAD dependent oxidoreductase central domain NtRootA4_41720 PF01571 Aminomethyltransferase folate-binding domain NtRootA4_41720 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootA4_41730 PF00551 Formyl transferase NtRootA4_41760 PF13556 PucR C-terminal helix-turn-helix domain NtRootA4_41760 PF07905 Purine catabolism regulatory protein-like family NtRootA4_41810 PF13478 XdhC Rossmann domain NtRootA4_41810 PF02625 XdhC and CoxI family NtRootA4_41840 PF00795 Carbon-nitrogen hydrolase NtRootA4_41860 PF01494 FAD binding domain NtRootA4_41890 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NtRootA4_41890 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NtRootA4_41900 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NtRootA4_41940 PF00941 FAD binding domain in molybdopterin dehydrogenase NtRootA4_41940 PF03450 CO dehydrogenase flavoprotein C-terminal domain NtRootA4_41970 PF01593 Flavin containing amine oxidoreductase NtRootA4_41980 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NtRootA4_41980 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NtRootA4_42000 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootA4_42000 PF01799 [2Fe-2S] binding domain NtRootA4_42030 PF00665 Integrase core domain NtRootA4_42060 PF06463 Molybdenum Cofactor Synthesis C NtRootA4_42060 PF04055 Radical SAM superfamily NtRootA4_42070 PF00994 Probable molybdopterin binding domain NtRootA4_42070 PF03454 MoeA C-terminal region (domain IV) NtRootA4_42070 PF03453 MoeA N-terminal region (domain I and II) NtRootA4_42080 PF01967 MoaC family NtRootA4_42090 PF02391 MoaE protein NtRootA4_42110 PF00528 Binding-protein-dependent transport system inner membrane component NtRootA4_42120 PF00005 ABC transporter NtRootA4_42120 PF03459 TOBE domain NtRootA4_42150 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootA4_42170 PF00356 Bacterial regulatory proteins, lacI family NtRootA4_42200 PF08031 Berberine and berberine like NtRootA4_42200 PF01565 FAD binding domain NtRootA4_42510 PF13614 AAA domain NtRootA4_42560 PF00665 Integrase core domain NtRootA4_42560 PF09299 Mu transposase, C-terminal NtRootA4_42570 PF13401 AAA domain NtRootA4_42580 PF02796 Helix-turn-helix domain of resolvase NtRootA4_42580 PF00239 Resolvase, N terminal domain NtRootA4_42640 PF04679 ATP dependent DNA ligase C terminal region NtRootA4_42640 PF01068 ATP dependent DNA ligase domain NtRootA4_42670 PF12697 Alpha/beta hydrolase family NtRootA4_42690 PF07859 alpha/beta hydrolase fold NtRootA4_42700 PF00083 Sugar (and other) transporter NtRootA4_42710 PF00356 Bacterial regulatory proteins, lacI family