locus-tag class description NtRootC45_00010 PF00308 Bacterial dnaA protein NtRootC45_00010 PF08299 Bacterial dnaA protein helix-turn-helix NtRootC45_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain NtRootC45_00020 PF02767 DNA polymerase III beta subunit, central domain NtRootC45_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain NtRootC45_00030 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NtRootC45_00030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC45_00040 PF02463 RecF/RecN/SMC N terminal domain NtRootC45_00050 PF05258 Dna[CI] antecedent, DciA NtRootC45_00060 PF00204 DNA gyrase B NtRootC45_00060 PF00986 DNA gyrase B subunit, carboxyl terminus NtRootC45_00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_00060 PF01751 Toprim domain NtRootC45_00070 PF00521 DNA gyrase/topoisomerase IV, subunit A NtRootC45_00070 PF03989 DNA gyrase C-terminal domain, beta-propeller NtRootC45_00090 PF12089 Transmembrane domain of unknown function (DUF3566) NtRootC45_00130 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NtRootC45_00140 PF01694 Rhomboid family NtRootC45_00160 PF03352 Methyladenine glycosylase NtRootC45_00180 PF02805 Metal binding domain of Ada NtRootC45_00180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NtRootC45_00180 PF12833 Helix-turn-helix domain NtRootC45_00180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NtRootC45_00190 PF04542 Sigma-70 region 2 NtRootC45_00190 PF04545 Sigma-70, region 4 NtRootC45_00200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NtRootC45_00200 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NtRootC45_00210 PF06781 Cell division protein CrgA NtRootC45_00220 PF04203 Sortase domain NtRootC45_00230 PF00117 Glutamine amidotransferase class-I NtRootC45_00240 PF03793 PASTA domain NtRootC45_00240 PF00069 Protein kinase domain NtRootC45_00250 PF00069 Protein kinase domain NtRootC45_00260 PF00905 Penicillin binding protein transpeptidase domain NtRootC45_00270 PF01098 Cell cycle protein NtRootC45_00290 PF16697 Inner membrane component of T3SS, cytoplasmic domain NtRootC45_00300 PF12401 Protein of unknown function (DUF2662) NtRootC45_00300 PF00498 FHA domain NtRootC45_00310 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_00310 PF07729 FCD domain NtRootC45_00320 PF13378 Enolase C-terminal domain-like NtRootC45_00320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootC45_00340 PF12146 Serine aminopeptidase, S33 NtRootC45_00350 PF01425 Amidase NtRootC45_00390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC45_00390 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC45_00390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC45_00420 PF07690 Major Facilitator Superfamily NtRootC45_00430 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NtRootC45_00460 PF01593 Flavin containing amine oxidoreductase NtRootC45_00470 PF00582 Universal stress protein family NtRootC45_00500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootC45_00530 PF07729 FCD domain NtRootC45_00530 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_00540 PF03746 LamB/YcsF family NtRootC45_00550 PF07690 Major Facilitator Superfamily NtRootC45_00550 PF00083 Sugar (and other) transporter NtRootC45_00560 PF02682 Carboxyltransferase domain, subdomain C and D NtRootC45_00570 PF02785 Biotin carboxylase C-terminal domain NtRootC45_00570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootC45_00570 PF00364 Biotin-requiring enzyme NtRootC45_00570 PF00289 Biotin carboxylase, N-terminal domain NtRootC45_00580 PF00480 ROK family NtRootC45_00590 PF13416 Bacterial extracellular solute-binding protein NtRootC45_00610 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_00610 PF14785 Maltose transport system permease protein MalF P2 domain NtRootC45_00620 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_00640 PF00480 ROK family NtRootC45_00650 PF16385 Domain of unknown function NtRootC45_00650 PF00884 Sulfatase NtRootC45_00670 PF03932 CutC family NtRootC45_00680 PF01565 FAD binding domain NtRootC45_00680 PF04030 D-arabinono-1,4-lactone oxidase NtRootC45_00690 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_00700 PF01638 HxlR-like helix-turn-helix NtRootC45_00720 PF01758 Sodium Bile acid symporter family NtRootC45_00730 PF00916 Sulfate permease family NtRootC45_00730 PF01740 STAS domain NtRootC45_00760 PF00294 pfkB family carbohydrate kinase NtRootC45_00770 PF13409 Glutathione S-transferase, N-terminal domain NtRootC45_00820 PF03009 Glycerophosphoryl diester phosphodiesterase family NtRootC45_00830 PF02837 Glycosyl hydrolases family 2, sugar binding domain NtRootC45_00830 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NtRootC45_00830 PF00703 Glycosyl hydrolases family 2 NtRootC45_00830 PF16353 Domain of unknown function(DUF4981) NtRootC45_00830 PF02929 Beta galactosidase small chain NtRootC45_00840 PF01842 ACT domain NtRootC45_00840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC45_00840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootC45_00850 PF02595 Glycerate kinase family NtRootC45_00860 PF10944 Protein of unknown function (DUF2630) NtRootC45_00950 PF04294 VanW like protein NtRootC45_00980 PF02586 SOS response associated peptidase (SRAP) NtRootC45_01010 PF01965 DJ-1/PfpI family NtRootC45_01030 PF00005 ABC transporter NtRootC45_01050 PF00072 Response regulator receiver domain NtRootC45_01050 PF00196 Bacterial regulatory proteins, luxR family NtRootC45_01060 PF07730 Histidine kinase NtRootC45_01060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_01090 PF00860 Permease family NtRootC45_01110 PF00881 Nitroreductase family NtRootC45_01130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootC45_01130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootC45_01130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootC45_01130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootC45_01150 PF00854 POT family NtRootC45_01160 PF01425 Amidase NtRootC45_01170 PF03575 Peptidase family S51 NtRootC45_01180 PF00581 Rhodanese-like domain NtRootC45_01180 PF01206 Sulfurtransferase TusA NtRootC45_01190 PF00800 Prephenate dehydratase NtRootC45_01190 PF01842 ACT domain NtRootC45_01210 PF00781 Diacylglycerol kinase catalytic domain NtRootC45_01220 PF02403 Seryl-tRNA synthetase N-terminal domain NtRootC45_01220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootC45_01230 PF13649 Methyltransferase domain NtRootC45_01240 PF13538 UvrD-like helicase C-terminal domain NtRootC45_01270 PF04545 Sigma-70, region 4 NtRootC45_01270 PF04539 Sigma-70 region 3 NtRootC45_01270 PF04542 Sigma-70 region 2 NtRootC45_01380 PF00719 Inorganic pyrophosphatase NtRootC45_01390 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NtRootC45_01410 PF01171 PP-loop family NtRootC45_01410 PF09179 TilS substrate binding domain NtRootC45_01420 PF00156 Phosphoribosyl transferase domain NtRootC45_01440 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC45_01440 PF17862 AAA+ lid domain NtRootC45_01440 PF01434 Peptidase family M41 NtRootC45_01450 PF01227 GTP cyclohydrolase I NtRootC45_01460 PF00809 Pterin binding enzyme NtRootC45_01470 PF02152 Dihydroneopterin aldolase NtRootC45_01480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NtRootC45_01530 PF02569 Pantoate-beta-alanine ligase NtRootC45_01550 PF07690 Major Facilitator Superfamily NtRootC45_01600 PF01336 OB-fold nucleic acid binding domain NtRootC45_01600 PF00152 tRNA synthetases class II (D, K and N) NtRootC45_01620 PF11774 Lsr2 NtRootC45_01630 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC45_01630 PF07724 AAA domain (Cdc48 subfamily) NtRootC45_01630 PF17871 AAA lid domain NtRootC45_01630 PF02861 Clp amino terminal domain, pathogenicity island component NtRootC45_01630 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootC45_01640 PF03033 Glycosyltransferase family 28 N-terminal domain NtRootC45_01650 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NtRootC45_01650 PF07676 WD40-like Beta Propeller Repeat NtRootC45_01650 PF00326 Prolyl oligopeptidase family NtRootC45_01660 PF00583 Acetyltransferase (GNAT) family NtRootC45_01670 PF01565 FAD binding domain NtRootC45_01670 PF08031 Berberine and berberine like NtRootC45_01690 PF02733 Dak1 domain NtRootC45_01700 PF02734 DAK2 domain NtRootC45_01710 PF03610 PTS system fructose IIA component NtRootC45_01770 PF03861 ANTAR domain NtRootC45_01770 PF08376 Nitrate and nitrite sensing NtRootC45_01790 PF00375 Sodium:dicarboxylate symporter family NtRootC45_01810 PF00730 HhH-GPD superfamily base excision DNA repair protein NtRootC45_01810 PF00633 Helix-hairpin-helix motif NtRootC45_01830 PF02457 DisA bacterial checkpoint controller nucleotide-binding NtRootC45_01830 PF10635 DisA bacterial checkpoint controller linker region NtRootC45_01830 PF00633 Helix-hairpin-helix motif NtRootC45_01850 PF18073 Rubredoxin metal binding domain NtRootC45_01860 PF01569 PAP2 superfamily NtRootC45_01880 PF12849 PBP superfamily domain NtRootC45_01890 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_01900 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_01910 PF00005 ABC transporter NtRootC45_01960 PF01384 Phosphate transporter family NtRootC45_02010 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NtRootC45_02030 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_02040 PF14031 Putative serine dehydratase domain NtRootC45_02070 PF00547 Urease, gamma subunit NtRootC45_02080 PF00699 Urease beta subunit NtRootC45_02090 PF01979 Amidohydrolase family NtRootC45_02090 PF00449 Urease alpha-subunit, N-terminal domain NtRootC45_02100 PF05194 UreE urease accessory protein, C-terminal domain NtRootC45_02100 PF02814 UreE urease accessory protein, N-terminal domain NtRootC45_02110 PF01730 UreF NtRootC45_02120 PF02492 CobW/HypB/UreG, nucleotide-binding domain NtRootC45_02130 PF01774 UreD urease accessory protein NtRootC45_02140 PF03824 High-affinity nickel-transport protein NtRootC45_02180 PF00583 Acetyltransferase (GNAT) family NtRootC45_02190 PF00128 Alpha amylase, catalytic domain NtRootC45_02190 PF03714 Bacterial pullanase-associated domain NtRootC45_02190 PF02806 Alpha amylase, C-terminal all-beta domain NtRootC45_02230 PF10282 Lactonase, 7-bladed beta-propeller NtRootC45_02240 PF00248 Aldo/keto reductase family NtRootC45_02260 PF00248 Aldo/keto reductase family NtRootC45_02270 PF00248 Aldo/keto reductase family NtRootC45_02290 PF13936 Helix-turn-helix domain NtRootC45_02290 PF00665 Integrase core domain NtRootC45_02300 PF07311 Dodecin NtRootC45_02340 PF02796 Helix-turn-helix domain of resolvase NtRootC45_02340 PF00239 Resolvase, N terminal domain NtRootC45_02350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC45_02350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC45_02350 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC45_02360 PF04199 Putative cyclase NtRootC45_02370 PF01593 Flavin containing amine oxidoreductase NtRootC45_02380 PF01613 Flavin reductase like domain NtRootC45_02420 PF14525 AraC-binding-like domain NtRootC45_02420 PF12833 Helix-turn-helix domain NtRootC45_02430 PF07729 FCD domain NtRootC45_02430 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_02440 PF00561 alpha/beta hydrolase fold NtRootC45_02460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootC45_02460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC45_02470 PF02447 GntP family permease NtRootC45_02480 PF01116 Fructose-bisphosphate aldolase class-II NtRootC45_02580 PF00282 Pyridoxal-dependent decarboxylase conserved domain NtRootC45_02590 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NtRootC45_02610 PF06276 Ferric iron reductase FhuF-like transporter NtRootC45_02610 PF04183 IucA / IucC family NtRootC45_02650 PF00005 ABC transporter NtRootC45_02680 PF00535 Glycosyl transferase family 2 NtRootC45_02700 PF00398 Ribosomal RNA adenine dimethylase NtRootC45_02710 PF00202 Aminotransferase class-III NtRootC45_02780 PF00583 Acetyltransferase (GNAT) family NtRootC45_02810 PF00892 EamA-like transporter family NtRootC45_02820 PF00155 Aminotransferase class I and II NtRootC45_02820 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_02830 PF07729 FCD domain NtRootC45_02830 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_02840 PF13416 Bacterial extracellular solute-binding protein NtRootC45_02850 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_02860 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_02870 PF13378 Enolase C-terminal domain-like NtRootC45_02870 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootC45_02880 PF00171 Aldehyde dehydrogenase family NtRootC45_02900 PF00083 Sugar (and other) transporter NtRootC45_02910 PF13649 Methyltransferase domain NtRootC45_02910 PF17827 PrmC N-terminal domain NtRootC45_02940 PF04679 ATP dependent DNA ligase C terminal region NtRootC45_02940 PF13298 DNA polymerase Ligase (LigD) NtRootC45_02940 PF01068 ATP dependent DNA ligase domain NtRootC45_02950 PF02735 Ku70/Ku80 beta-barrel domain NtRootC45_02960 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_02970 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_03000 PF07729 FCD domain NtRootC45_03000 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_03050 PF00210 Ferritin-like domain NtRootC45_03080 PF13977 BetI-type transcriptional repressor, C-terminal NtRootC45_03080 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_03100 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NtRootC45_03100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NtRootC45_03110 PF00294 pfkB family carbohydrate kinase NtRootC45_03120 PF00455 DeoR C terminal sensor domain NtRootC45_03120 PF08220 DeoR-like helix-turn-helix domain NtRootC45_03170 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootC45_03210 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_03220 PF13419 Haloacid dehalogenase-like hydrolase NtRootC45_03230 PF03633 Glycosyl hydrolase family 65, C-terminal domain NtRootC45_03230 PF03632 Glycosyl hydrolase family 65 central catalytic domain NtRootC45_03230 PF03636 Glycosyl hydrolase family 65, N-terminal domain NtRootC45_03270 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NtRootC45_03270 PF01409 tRNA synthetases class II core domain (F) NtRootC45_03290 PF01047 MarR family NtRootC45_03300 PF01040 UbiA prenyltransferase family NtRootC45_03320 PF01593 Flavin containing amine oxidoreductase NtRootC45_03340 PF00348 Polyprenyl synthetase NtRootC45_03350 PF00293 NUDIX domain NtRootC45_03420 PF00920 Dehydratase family NtRootC45_03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_03440 PF03466 LysR substrate binding domain NtRootC45_03450 PF00892 EamA-like transporter family NtRootC45_03460 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_03470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_03470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_03480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_03480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_03490 PF01261 Xylose isomerase-like TIM barrel NtRootC45_03500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_03500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_03510 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_03550 PF03746 LamB/YcsF family NtRootC45_03560 PF02626 Carboxyltransferase domain, subdomain A and B NtRootC45_03580 PF04286 Protein of unknown function (DUF445) NtRootC45_03590 PF03009 Glycerophosphoryl diester phosphodiesterase family NtRootC45_03650 PF01910 Thiamine-binding protein NtRootC45_03660 PF01596 O-methyltransferase NtRootC45_03670 PF00583 Acetyltransferase (GNAT) family NtRootC45_03700 PF00664 ABC transporter transmembrane region NtRootC45_03700 PF00005 ABC transporter NtRootC45_03710 PF00005 ABC transporter NtRootC45_03710 PF00664 ABC transporter transmembrane region NtRootC45_03720 PF12833 Helix-turn-helix domain NtRootC45_03720 PF02311 AraC-like ligand binding domain NtRootC45_03760 PF01032 FecCD transport family NtRootC45_03770 PF01032 FecCD transport family NtRootC45_03780 PF00005 ABC transporter NtRootC45_03790 PF00665 Integrase core domain NtRootC45_03790 PF13936 Helix-turn-helix domain NtRootC45_03810 PF00083 Sugar (and other) transporter NtRootC45_03830 PF13936 Helix-turn-helix domain NtRootC45_03830 PF00665 Integrase core domain NtRootC45_03850 PF00324 Amino acid permease NtRootC45_03890 PF01175 Urocanase Rossmann-like domain NtRootC45_03890 PF17392 Urocanase C-terminal domain NtRootC45_03890 PF17391 Urocanase N-terminal domain NtRootC45_03900 PF00221 Aromatic amino acid lyase NtRootC45_03930 PF00665 Integrase core domain NtRootC45_03930 PF13936 Helix-turn-helix domain NtRootC45_03950 PF00491 Arginase family NtRootC45_03960 PF00860 Permease family NtRootC45_04010 PF00582 Universal stress protein family NtRootC45_04020 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootC45_04020 PF00391 PEP-utilising enzyme, mobile domain NtRootC45_04030 PF01545 Cation efflux family NtRootC45_04030 PF16916 Dimerisation domain of Zinc Transporter NtRootC45_04050 PF00294 pfkB family carbohydrate kinase NtRootC45_04210 PF01545 Cation efflux family NtRootC45_04230 PF01022 Bacterial regulatory protein, arsR family NtRootC45_04260 PF01547 Bacterial extracellular solute-binding protein NtRootC45_04270 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_04280 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_04300 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_04340 PF00196 Bacterial regulatory proteins, luxR family NtRootC45_04340 PF00072 Response regulator receiver domain NtRootC45_04350 PF07730 Histidine kinase NtRootC45_04370 PF12796 Ankyrin repeats (3 copies) NtRootC45_04380 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootC45_04380 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootC45_04390 PF01144 Coenzyme A transferase NtRootC45_04400 PF01144 Coenzyme A transferase NtRootC45_04450 PF02469 Fasciclin domain NtRootC45_04470 PF02028 BCCT, betaine/carnitine/choline family transporter NtRootC45_04480 PF09339 IclR helix-turn-helix domain NtRootC45_04480 PF01614 Bacterial transcriptional regulator NtRootC45_04490 PF02634 FdhD/NarQ family NtRootC45_04500 PF00994 Probable molybdopterin binding domain NtRootC45_04500 PF03454 MoeA C-terminal region (domain IV) NtRootC45_04500 PF03453 MoeA N-terminal region (domain I and II) NtRootC45_04510 PF00107 Zinc-binding dehydrogenase NtRootC45_04510 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_04520 PF01568 Molydopterin dinucleotide binding domain NtRootC45_04520 PF00384 Molybdopterin oxidoreductase NtRootC45_04530 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NtRootC45_04530 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NtRootC45_04540 PF04961 Formiminotransferase-cyclodeaminase NtRootC45_04550 PF01266 FAD dependent oxidoreductase NtRootC45_04550 PF16350 FAD dependent oxidoreductase central domain NtRootC45_04550 PF01571 Aminomethyltransferase folate-binding domain NtRootC45_04550 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC45_04560 PF00551 Formyl transferase NtRootC45_04570 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_04570 PF07729 FCD domain NtRootC45_04580 PF01680 SOR/SNZ family NtRootC45_04600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_04600 PF03466 LysR substrate binding domain NtRootC45_04610 PF00355 Rieske [2Fe-2S] domain NtRootC45_04610 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NtRootC45_04620 PF00970 Oxidoreductase FAD-binding domain NtRootC45_04620 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootC45_04620 PF00175 Oxidoreductase NAD-binding domain NtRootC45_04630 PF00196 Bacterial regulatory proteins, luxR family NtRootC45_04630 PF00072 Response regulator receiver domain NtRootC45_04640 PF01380 SIS domain NtRootC45_04650 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NtRootC45_04680 PF03441 FAD binding domain of DNA photolyase NtRootC45_04680 PF00875 DNA photolyase NtRootC45_04700 PF00171 Aldehyde dehydrogenase family NtRootC45_04710 PF00378 Enoyl-CoA hydratase/isomerase NtRootC45_04720 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootC45_04720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC45_04730 PF00378 Enoyl-CoA hydratase/isomerase NtRootC45_04770 PF00501 AMP-binding enzyme NtRootC45_04770 PF13193 AMP-binding enzyme C-terminal domain NtRootC45_04780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC45_04780 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC45_04780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC45_04800 PF05199 GMC oxidoreductase NtRootC45_04800 PF00732 GMC oxidoreductase NtRootC45_04810 PF00171 Aldehyde dehydrogenase family NtRootC45_04850 PF00376 MerR family regulatory protein NtRootC45_04850 PF09278 MerR, DNA binding NtRootC45_04860 PF03551 Transcriptional regulator PadR-like family NtRootC45_04880 PF02540 NAD synthase NtRootC45_04890 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_04910 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_04920 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_04940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_04940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_04960 PF02614 Glucuronate isomerase NtRootC45_04970 PF08125 Mannitol dehydrogenase C-terminal domain NtRootC45_04970 PF01232 Mannitol dehydrogenase Rossmann domain NtRootC45_04980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootC45_04980 PF13378 Enolase C-terminal domain-like NtRootC45_04990 PF01202 Shikimate kinase NtRootC45_05000 PF13407 Periplasmic binding protein domain NtRootC45_05010 PF00005 ABC transporter NtRootC45_05020 PF02653 Branched-chain amino acid transport system / permease component NtRootC45_05030 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_05040 PF00156 Phosphoribosyl transferase domain NtRootC45_05070 PF13344 Haloacid dehalogenase-like hydrolase NtRootC45_05100 PF13936 Helix-turn-helix domain NtRootC45_05100 PF00665 Integrase core domain NtRootC45_05120 PF00665 Integrase core domain NtRootC45_05120 PF13936 Helix-turn-helix domain NtRootC45_05130 PF01116 Fructose-bisphosphate aldolase class-II NtRootC45_05150 PF00005 ABC transporter NtRootC45_05160 PF01032 FecCD transport family NtRootC45_05170 PF01032 FecCD transport family NtRootC45_05180 PF01497 Periplasmic binding protein NtRootC45_05250 PF00709 Adenylosuccinate synthetase NtRootC45_05260 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_05260 PF07689 KaiB domain NtRootC45_05280 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_05290 PF07690 Major Facilitator Superfamily NtRootC45_05300 PF08450 SMP-30/Gluconolactonase/LRE-like region NtRootC45_05320 PF00698 Acyl transferase domain NtRootC45_05320 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_05320 PF14765 Polyketide synthase dehydratase NtRootC45_05320 PF00550 Phosphopantetheine attachment site NtRootC45_05320 PF08659 KR domain NtRootC45_05320 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootC45_05320 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootC45_05320 PF16197 Ketoacyl-synthetase C-terminal extension NtRootC45_05320 PF00107 Zinc-binding dehydrogenase NtRootC45_05330 PF16326 ABC transporter C-terminal domain NtRootC45_05330 PF12848 ABC transporter NtRootC45_05330 PF00005 ABC transporter NtRootC45_05350 PF00561 alpha/beta hydrolase fold NtRootC45_05370 PF07690 Major Facilitator Superfamily NtRootC45_05370 PF00083 Sugar (and other) transporter NtRootC45_05380 PF00999 Sodium/hydrogen exchanger family NtRootC45_05380 PF03471 Transporter associated domain NtRootC45_05380 PF02080 TrkA-C domain NtRootC45_05390 PF02368 Bacterial Ig-like domain (group 2) NtRootC45_05390 PF11999 Protein of unknown function (DUF3494) NtRootC45_05420 PF07859 alpha/beta hydrolase fold NtRootC45_05440 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_05450 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC45_05460 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_05470 PF00005 ABC transporter NtRootC45_05480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_05480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_05490 PF01266 FAD dependent oxidoreductase NtRootC45_05520 PF01594 AI-2E family transporter NtRootC45_05580 PF13380 CoA binding domain NtRootC45_05610 PF04237 YjbR NtRootC45_05620 PF01547 Bacterial extracellular solute-binding protein NtRootC45_05630 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_05640 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_05660 PF14525 AraC-binding-like domain NtRootC45_05660 PF12833 Helix-turn-helix domain NtRootC45_05690 PF01613 Flavin reductase like domain NtRootC45_05710 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal NtRootC45_05710 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal NtRootC45_05730 PF00795 Carbon-nitrogen hydrolase NtRootC45_05740 PF00083 Sugar (and other) transporter NtRootC45_05790 PF00437 Type II/IV secretion system protein NtRootC45_05790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NtRootC45_05800 PF00990 Diguanylate cyclase, GGDEF domain NtRootC45_05800 PF17151 Periplasmic sensor domain NtRootC45_05820 PF00990 Diguanylate cyclase, GGDEF domain NtRootC45_05820 PF00563 EAL domain NtRootC45_05820 PF03707 Bacterial signalling protein N terminal repeat NtRootC45_05830 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NtRootC45_05830 PF02769 AIR synthase related protein, C-terminal domain NtRootC45_05830 PF00586 AIR synthase related protein, N-terminal domain NtRootC45_05880 PF05067 Manganese containing catalase NtRootC45_05890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC45_05900 PF13088 BNR repeat-like domain NtRootC45_05900 PF00754 F5/8 type C domain NtRootC45_05900 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase NtRootC45_05910 PF00082 Subtilase family NtRootC45_05910 PF02225 PA domain NtRootC45_05910 PF06280 Fn3-like domain NtRootC45_05910 PF00746 LPXTG cell wall anchor motif NtRootC45_05950 PF01047 MarR family NtRootC45_05970 PF13936 Helix-turn-helix domain NtRootC45_05970 PF00665 Integrase core domain NtRootC45_05990 PF06305 Lipopolysaccharide assembly protein A domain NtRootC45_06010 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootC45_06010 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootC45_06010 PF14310 Fibronectin type III-like domain NtRootC45_06010 PF07691 PA14 domain NtRootC45_06060 PF04314 Copper chaperone PCu(A)C NtRootC45_06070 PF10518 TAT (twin-arginine translocation) pathway signal sequence NtRootC45_06070 PF04261 Dyp-type peroxidase family NtRootC45_06080 PF01842 ACT domain NtRootC45_06080 PF00696 Amino acid kinase family NtRootC45_06080 PF13840 ACT domain NtRootC45_06120 PF13662 Toprim domain NtRootC45_06120 PF02132 RecR protein NtRootC45_06130 PF12169 DNA polymerase III subunits gamma and tau domain III NtRootC45_06140 PF01784 NIF3 (NGG1p interacting factor 3) NtRootC45_06160 PF00171 Aldehyde dehydrogenase family NtRootC45_06180 PF07690 Major Facilitator Superfamily NtRootC45_06190 PF01047 MarR family NtRootC45_06250 PF01551 Peptidase family M23 NtRootC45_06250 PF01464 Transglycosylase SLT domain NtRootC45_06250 PF10145 Phage-related minor tail protein NtRootC45_06260 PF00255 Glutathione peroxidase NtRootC45_06270 PF00149 Calcineurin-like phosphoesterase NtRootC45_06280 PF11380 Stealth protein CR2, conserved region 2 NtRootC45_06280 PF17102 Stealth protein CR3, conserved region 3 NtRootC45_06280 PF17103 Stealth protein CR4, conserved region 4 NtRootC45_06280 PF17101 Stealth protein CR1, conserved region 1 NtRootC45_06330 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_06350 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_06360 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_06370 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NtRootC45_06390 PF13439 Glycosyltransferase Family 4 NtRootC45_06420 PF05048 Periplasmic copper-binding protein (NosD) NtRootC45_06420 PF18835 Beta helix repeat of Inulin fructotransferase NtRootC45_06430 PF00294 pfkB family carbohydrate kinase NtRootC45_06440 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootC45_06440 PF08244 Glycosyl hydrolases family 32 C terminal NtRootC45_06450 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_06460 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_06470 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_06490 PF18835 Beta helix repeat of Inulin fructotransferase NtRootC45_06490 PF05048 Periplasmic copper-binding protein (NosD) NtRootC45_06500 PF00582 Universal stress protein family NtRootC45_06510 PF01970 Tripartite tricarboxylate transporter TctA family NtRootC45_06540 PF17203 Single cache domain 3 NtRootC45_06540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_06540 PF00989 PAS fold NtRootC45_06540 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NtRootC45_06550 PF00072 Response regulator receiver domain NtRootC45_06550 PF12431 Transcriptional regulator NtRootC45_06560 PF03928 Haem-degrading NtRootC45_06570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_06570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_06580 PF07676 WD40-like Beta Propeller Repeat NtRootC45_06600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_06600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_06610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_06610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_06630 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_06640 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_06670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_06670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_06680 PF01047 MarR family NtRootC45_06680 PF00480 ROK family NtRootC45_06700 PF01274 Malate synthase NtRootC45_06710 PF00463 Isocitrate lyase family NtRootC45_06720 PF01381 Helix-turn-helix NtRootC45_06770 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_06790 PF08543 Phosphomethylpyrimidine kinase NtRootC45_06810 PF08521 Two-component sensor kinase N-terminal NtRootC45_06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_06810 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_06820 PF00072 Response regulator receiver domain NtRootC45_06820 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_06830 PF00083 Sugar (and other) transporter NtRootC45_06850 PF01370 NAD dependent epimerase/dehydratase family NtRootC45_06850 PF08338 Domain of unknown function (DUF1731) NtRootC45_06860 PF17932 Tetracyclin repressor-like, C-terminal domain NtRootC45_06860 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_06890 PF01702 Queuine tRNA-ribosyltransferase NtRootC45_06960 PF00106 short chain dehydrogenase NtRootC45_06970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC45_06970 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC45_06970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC45_07030 PF00311 Phosphoenolpyruvate carboxylase NtRootC45_07050 PF09335 SNARE associated Golgi protein NtRootC45_07060 PF01661 Macro domain NtRootC45_07070 PF00849 RNA pseudouridylate synthase NtRootC45_07120 PF00155 Aminotransferase class I and II NtRootC45_07140 PF11606 Family 31 carbohydrate binding protein NtRootC45_07160 PF07238 PilZ domain NtRootC45_07160 PF03552 Cellulose synthase NtRootC45_07160 PF00535 Glycosyl transferase family 2 NtRootC45_07170 PF00722 Glycosyl hydrolases family 16 NtRootC45_07180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NtRootC45_07180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootC45_07190 PF00271 Helicase conserved C-terminal domain NtRootC45_07190 PF08494 DEAD/H associated NtRootC45_07190 PF00270 DEAD/DEAH box helicase NtRootC45_07240 PF00999 Sodium/hydrogen exchanger family NtRootC45_07240 PF02254 TrkA-N domain NtRootC45_07240 PF02080 TrkA-C domain NtRootC45_07270 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_07270 PF00107 Zinc-binding dehydrogenase NtRootC45_07290 PF13439 Glycosyltransferase Family 4 NtRootC45_07290 PF00534 Glycosyl transferases group 1 NtRootC45_07320 PF14437 MafB19-like deaminase NtRootC45_07370 PF13419 Haloacid dehalogenase-like hydrolase NtRootC45_07410 PF00672 HAMP domain NtRootC45_07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_07410 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_07420 PF00072 Response regulator receiver domain NtRootC45_07420 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_07430 PF00072 Response regulator receiver domain NtRootC45_07430 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_07450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_07450 PF03466 LysR substrate binding domain NtRootC45_07460 PF00892 EamA-like transporter family NtRootC45_07480 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_07480 PF08361 MAATS-type transcriptional repressor, C-terminal region NtRootC45_07510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootC45_07510 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_07510 PF00403 Heavy-metal-associated domain NtRootC45_07520 PF00581 Rhodanese-like domain NtRootC45_07530 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase NtRootC45_07540 PF00480 ROK family NtRootC45_07550 PF00701 Dihydrodipicolinate synthetase family NtRootC45_07560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC45_07560 PF00005 ABC transporter NtRootC45_07570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC45_07570 PF00005 ABC transporter NtRootC45_07580 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_07590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootC45_07610 PF17932 Tetracyclin repressor-like, C-terminal domain NtRootC45_07610 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_07620 PF07690 Major Facilitator Superfamily NtRootC45_07630 PF04199 Putative cyclase NtRootC45_07640 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC45_07650 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NtRootC45_07650 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NtRootC45_07660 PF00042 Globin NtRootC45_07660 PF00175 Oxidoreductase NAD-binding domain NtRootC45_07660 PF00970 Oxidoreductase FAD-binding domain NtRootC45_07710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootC45_07710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootC45_07710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootC45_07710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootC45_07720 PF16124 RecQ zinc-binding NtRootC45_07720 PF09382 RQC domain NtRootC45_07720 PF00271 Helicase conserved C-terminal domain NtRootC45_07720 PF00270 DEAD/DEAH box helicase NtRootC45_07720 PF00570 HRDC domain NtRootC45_07740 PF07690 Major Facilitator Superfamily NtRootC45_07750 PF00326 Prolyl oligopeptidase family NtRootC45_07750 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NtRootC45_07770 PF00324 Amino acid permease NtRootC45_07780 PF00149 Calcineurin-like phosphoesterase NtRootC45_07810 PF00698 Acyl transferase domain NtRootC45_07810 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_07810 PF16197 Ketoacyl-synthetase C-terminal extension NtRootC45_07810 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootC45_07810 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootC45_07810 PF08659 KR domain NtRootC45_07810 PF00550 Phosphopantetheine attachment site NtRootC45_07810 PF14765 Polyketide synthase dehydratase NtRootC45_07830 PF13722 5TM C-terminal transporter carbon starvation CstA NtRootC45_07830 PF02554 Carbon starvation protein CstA NtRootC45_07850 PF10759 Protein of unknown function (DUF2587) NtRootC45_07870 PF00248 Aldo/keto reductase family NtRootC45_07890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_07890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_07900 PF01261 Xylose isomerase-like TIM barrel NtRootC45_07910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_07910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_07920 PF02653 Branched-chain amino acid transport system / permease component NtRootC45_07930 PF00005 ABC transporter NtRootC45_07960 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_07990 PF01425 Amidase NtRootC45_08020 PF07687 Peptidase dimerisation domain NtRootC45_08020 PF01546 Peptidase family M20/M25/M40 NtRootC45_08030 PF02515 CoA-transferase family III NtRootC45_08040 PF01039 Carboxyl transferase domain NtRootC45_08080 PF00561 alpha/beta hydrolase fold NtRootC45_08090 PF12169 DNA polymerase III subunits gamma and tau domain III NtRootC45_08100 PF02223 Thymidylate kinase NtRootC45_08110 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootC45_08140 PF00300 Histidine phosphatase superfamily (branch 1) NtRootC45_08150 PF01895 PhoU domain NtRootC45_08160 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_08160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_08170 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_08170 PF00072 Response regulator receiver domain NtRootC45_08190 PF02559 CarD-like/TRCF domain NtRootC45_08200 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NtRootC45_08210 PF02542 YgbB family NtRootC45_08230 PF09190 DALR domain NtRootC45_08230 PF01406 tRNA synthetases class I (C) catalytic domain NtRootC45_08240 PF00588 SpoU rRNA Methylase family NtRootC45_08240 PF08032 RNA 2'-O ribose methyltransferase substrate binding NtRootC45_08260 PF00795 Carbon-nitrogen hydrolase NtRootC45_08270 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NtRootC45_08270 PF00128 Alpha amylase, catalytic domain NtRootC45_08300 PF11897 Protein of unknown function (DUF3417) NtRootC45_08300 PF00343 Carbohydrate phosphorylase NtRootC45_08310 PF11896 Domain of unknown function (DUF3416) NtRootC45_08320 PF00128 Alpha amylase, catalytic domain NtRootC45_08320 PF16657 Maltogenic Amylase, C-terminal domain NtRootC45_08330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NtRootC45_08330 PF00128 Alpha amylase, catalytic domain NtRootC45_08330 PF02806 Alpha amylase, C-terminal all-beta domain NtRootC45_08360 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_08370 PF00128 Alpha amylase, catalytic domain NtRootC45_08390 PF14785 Maltose transport system permease protein MalF P2 domain NtRootC45_08390 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_08400 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_08410 PF00128 Alpha amylase, catalytic domain NtRootC45_08410 PF02903 Alpha amylase, N-terminal ig-like domain NtRootC45_08420 PF02913 FAD linked oxidases, C-terminal domain NtRootC45_08420 PF01565 FAD binding domain NtRootC45_08450 PF07969 Amidohydrolase family NtRootC45_08460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC45_08460 PF00005 ABC transporter NtRootC45_08470 PF00005 ABC transporter NtRootC45_08470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC45_08480 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_08490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootC45_08500 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_08500 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootC45_08510 PF01979 Amidohydrolase family NtRootC45_08540 PF00728 Glycosyl hydrolase family 20, catalytic domain NtRootC45_08540 PF02838 Glycosyl hydrolase family 20, domain 2 NtRootC45_08550 PF00005 ABC transporter NtRootC45_08550 PF17912 MalK OB fold domain NtRootC45_08560 PF02358 Trehalose-phosphatase NtRootC45_08560 PF03636 Glycosyl hydrolase family 65, N-terminal domain NtRootC45_08560 PF03633 Glycosyl hydrolase family 65, C-terminal domain NtRootC45_08560 PF03632 Glycosyl hydrolase family 65 central catalytic domain NtRootC45_08570 PF00982 Glycosyltransferase family 20 NtRootC45_08590 PF02661 Fic/DOC family NtRootC45_08590 PF13784 Fic/DOC family N-terminal NtRootC45_08650 PF02861 Clp amino terminal domain, pathogenicity island component NtRootC45_08650 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC45_08650 PF07724 AAA domain (Cdc48 subfamily) NtRootC45_08650 PF17871 AAA lid domain NtRootC45_08650 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootC45_08670 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_08680 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_08690 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_08700 PF01547 Bacterial extracellular solute-binding protein NtRootC45_08720 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootC45_08720 PF08244 Glycosyl hydrolases family 32 C terminal NtRootC45_08760 PF09382 RQC domain NtRootC45_08760 PF16124 RecQ zinc-binding NtRootC45_08760 PF00270 DEAD/DEAH box helicase NtRootC45_08760 PF00570 HRDC domain NtRootC45_08760 PF00271 Helicase conserved C-terminal domain NtRootC45_08780 PF01256 Carbohydrate kinase NtRootC45_08800 PF13192 Thioredoxin domain NtRootC45_08800 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_08870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC45_08870 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC45_08870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC45_08880 PF01575 MaoC like domain NtRootC45_08890 PF00083 Sugar (and other) transporter NtRootC45_08900 PF13193 AMP-binding enzyme C-terminal domain NtRootC45_08900 PF00501 AMP-binding enzyme NtRootC45_08920 PF01266 FAD dependent oxidoreductase NtRootC45_08960 PF13520 Amino acid permease NtRootC45_08970 PF04371 Porphyromonas-type peptidyl-arginine deiminase NtRootC45_08980 PF00795 Carbon-nitrogen hydrolase NtRootC45_08990 PF00557 Metallopeptidase family M24 NtRootC45_09020 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_09040 PF07687 Peptidase dimerisation domain NtRootC45_09040 PF01546 Peptidase family M20/M25/M40 NtRootC45_09060 PF07690 Major Facilitator Superfamily NtRootC45_09070 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_09080 PF02347 Glycine cleavage system P-protein NtRootC45_09090 PF01571 Aminomethyltransferase folate-binding domain NtRootC45_09090 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC45_09100 PF01597 Glycine cleavage H-protein NtRootC45_09110 PF03315 Serine dehydratase beta chain NtRootC45_09110 PF03313 Serine dehydratase alpha chain NtRootC45_09120 PF01223 DNA/RNA non-specific endonuclease NtRootC45_09160 PF04954 Siderophore-interacting protein NtRootC45_09160 PF08021 Siderophore-interacting FAD-binding domain NtRootC45_09170 PF03167 Uracil DNA glycosylase superfamily NtRootC45_09200 PF00313 'Cold-shock' DNA-binding domain NtRootC45_09210 PF00118 TCP-1/cpn60 chaperonin family NtRootC45_09220 PF00075 RNase H NtRootC45_09240 PF00672 HAMP domain NtRootC45_09240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_09240 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_09250 PF00072 Response regulator receiver domain NtRootC45_09250 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_09260 PF01810 LysE type translocator NtRootC45_09270 PF03466 LysR substrate binding domain NtRootC45_09270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_09290 PF07731 Multicopper oxidase NtRootC45_09290 PF07732 Multicopper oxidase NtRootC45_09290 PF00394 Multicopper oxidase NtRootC45_09340 PF00313 'Cold-shock' DNA-binding domain NtRootC45_09360 PF05977 Transmembrane secretion effector NtRootC45_09370 PF00266 Aminotransferase class-V NtRootC45_09380 PF18357 Diphteria toxin repressor SH3 domain NtRootC45_09380 PF02742 Iron dependent repressor, metal binding and dimerisation domain NtRootC45_09380 PF01325 Iron dependent repressor, N-terminal DNA binding domain NtRootC45_09390 PF01551 Peptidase family M23 NtRootC45_09390 PF04225 Opacity-associated protein A LysM-like domain NtRootC45_09400 PF08239 Bacterial SH3 domain NtRootC45_09400 PF00877 NlpC/P60 family NtRootC45_09400 PF01476 LysM domain NtRootC45_09430 PF12804 MobA-like NTP transferase domain NtRootC45_09450 PF01568 Molydopterin dinucleotide binding domain NtRootC45_09450 PF00384 Molybdopterin oxidoreductase NtRootC45_09460 PF02634 FdhD/NarQ family NtRootC45_09500 PF00005 ABC transporter NtRootC45_09510 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_09520 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC45_09550 PF16326 ABC transporter C-terminal domain NtRootC45_09550 PF00005 ABC transporter NtRootC45_09550 PF12848 ABC transporter NtRootC45_09560 PF00664 ABC transporter transmembrane region NtRootC45_09560 PF00005 ABC transporter NtRootC45_09570 PF00293 NUDIX domain NtRootC45_09640 PF00459 Inositol monophosphatase family NtRootC45_09750 PF00196 Bacterial regulatory proteins, luxR family NtRootC45_09750 PF00072 Response regulator receiver domain NtRootC45_09760 PF13361 UvrD-like helicase C-terminal domain NtRootC45_09760 PF00580 UvrD/REP helicase N-terminal domain NtRootC45_09780 PF00549 CoA-ligase NtRootC45_09780 PF08442 ATP-grasp domain NtRootC45_09790 PF02629 CoA binding domain NtRootC45_09790 PF00549 CoA-ligase NtRootC45_09810 PF00294 pfkB family carbohydrate kinase NtRootC45_09830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC45_09830 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC45_09830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC45_09840 PF00171 Aldehyde dehydrogenase family NtRootC45_09850 PF01261 Xylose isomerase-like TIM barrel NtRootC45_09860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_09860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_09870 PF01261 Xylose isomerase-like TIM barrel NtRootC45_09880 PF04962 KduI/IolB family NtRootC45_09890 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_09890 PF07702 UTRA domain NtRootC45_09910 PF02653 Branched-chain amino acid transport system / permease component NtRootC45_09920 PF00005 ABC transporter NtRootC45_09930 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_09940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_09940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_09960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_09960 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_10050 PF00474 Sodium:solute symporter family NtRootC45_10060 PF07883 Cupin domain NtRootC45_10060 PF01381 Helix-turn-helix NtRootC45_10100 PF00491 Arginase family NtRootC45_10110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC45_10110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC45_10110 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC45_10120 PF07690 Major Facilitator Superfamily NtRootC45_10120 PF00083 Sugar (and other) transporter NtRootC45_10130 PF00753 Metallo-beta-lactamase superfamily NtRootC45_10140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_10140 PF03466 LysR substrate binding domain NtRootC45_10160 PF07690 Major Facilitator Superfamily NtRootC45_10170 PF00664 ABC transporter transmembrane region NtRootC45_10170 PF00005 ABC transporter NtRootC45_10180 PF00664 ABC transporter transmembrane region NtRootC45_10180 PF00005 ABC transporter NtRootC45_10200 PF03932 CutC family NtRootC45_10250 PF07728 AAA domain (dynein-related subfamily) NtRootC45_10250 PF12102 Domain of unknown function (DUF3578) NtRootC45_10280 PF13426 PAS domain NtRootC45_10280 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_10280 PF00672 HAMP domain NtRootC45_10280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_10290 PF00072 Response regulator receiver domain NtRootC45_10290 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_10300 PF00037 4Fe-4S binding domain NtRootC45_10310 PF00171 Aldehyde dehydrogenase family NtRootC45_10330 PF00701 Dihydrodipicolinate synthetase family NtRootC45_10340 PF00378 Enoyl-CoA hydratase/isomerase NtRootC45_10350 PF02515 CoA-transferase family III NtRootC45_10360 PF01571 Aminomethyltransferase folate-binding domain NtRootC45_10360 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC45_10360 PF17806 Sarcosine oxidase A3 domain NtRootC45_10360 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_10370 PF00083 Sugar (and other) transporter NtRootC45_10380 PF07883 Cupin domain NtRootC45_10380 PF01381 Helix-turn-helix NtRootC45_10410 PF06968 Biotin and Thiamin Synthesis associated domain NtRootC45_10410 PF04055 Radical SAM superfamily NtRootC45_10430 PF05532 CsbD-like NtRootC45_10460 PF00107 Zinc-binding dehydrogenase NtRootC45_10460 PF13823 Alcohol dehydrogenase GroES-associated NtRootC45_10460 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_10490 PF13580 SIS domain NtRootC45_10510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NtRootC45_10540 PF02734 DAK2 domain NtRootC45_10540 PF02733 Dak1 domain NtRootC45_10550 PF02502 Ribose/Galactose Isomerase NtRootC45_10560 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootC45_10560 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootC45_10580 PF07690 Major Facilitator Superfamily NtRootC45_10590 PF00121 Triosephosphate isomerase NtRootC45_10620 PF00571 CBS domain NtRootC45_10630 PF16921 Tex protein YqgF-like domain NtRootC45_10630 PF17674 HHH domain NtRootC45_10630 PF09371 Tex-like protein N-terminal domain NtRootC45_10630 PF00575 S1 RNA binding domain NtRootC45_10670 PF00962 Adenosine/AMP deaminase NtRootC45_10680 PF00128 Alpha amylase, catalytic domain NtRootC45_10680 PF02903 Alpha amylase, N-terminal ig-like domain NtRootC45_10680 PF00395 S-layer homology domain NtRootC45_10690 PF00708 Acylphosphatase NtRootC45_10700 PF01850 PIN domain NtRootC45_10720 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_10740 PF00294 pfkB family carbohydrate kinase NtRootC45_10750 PF07729 FCD domain NtRootC45_10750 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_10760 PF07690 Major Facilitator Superfamily NtRootC45_10770 PF01156 Inosine-uridine preferring nucleoside hydrolase NtRootC45_10790 PF08532 Beta-galactosidase trimerisation domain NtRootC45_10790 PF08533 Beta-galactosidase C-terminal domain NtRootC45_10790 PF02449 Beta-galactosidase NtRootC45_10800 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_10810 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_10820 PF01547 Bacterial extracellular solute-binding protein NtRootC45_10920 PF14310 Fibronectin type III-like domain NtRootC45_10920 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootC45_10920 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootC45_10930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_10930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_10960 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_10970 PF03466 LysR substrate binding domain NtRootC45_10970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_10980 PF00795 Carbon-nitrogen hydrolase NtRootC45_11000 PF07690 Major Facilitator Superfamily NtRootC45_11010 PF03741 Integral membrane protein TerC family NtRootC45_11070 PF01022 Bacterial regulatory protein, arsR family NtRootC45_11100 PF01047 MarR family NtRootC45_11110 PF00892 EamA-like transporter family NtRootC45_11130 PF00144 Beta-lactamase NtRootC45_11240 PF00313 'Cold-shock' DNA-binding domain NtRootC45_11260 PF13732 Domain of unknown function (DUF4162) NtRootC45_11260 PF00005 ABC transporter NtRootC45_11300 PF13520 Amino acid permease NtRootC45_11330 PF01047 MarR family NtRootC45_11370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NtRootC45_11370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NtRootC45_11370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NtRootC45_11380 PF00534 Glycosyl transferases group 1 NtRootC45_11380 PF13439 Glycosyltransferase Family 4 NtRootC45_11390 PF13411 MerR HTH family regulatory protein NtRootC45_11400 PF00011 Hsp20/alpha crystallin family NtRootC45_11410 PF00226 DnaJ domain NtRootC45_11410 PF01556 DnaJ C terminal domain NtRootC45_11410 PF00684 DnaJ central domain NtRootC45_11450 PF00551 Formyl transferase NtRootC45_11460 PF07690 Major Facilitator Superfamily NtRootC45_11470 PF01380 SIS domain NtRootC45_11510 PF02142 MGS-like domain NtRootC45_11510 PF01808 AICARFT/IMPCHase bienzyme NtRootC45_11530 PF03971 Monomeric isocitrate dehydrogenase NtRootC45_11540 PF01266 FAD dependent oxidoreductase NtRootC45_11550 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_11560 PF00005 ABC transporter NtRootC45_11590 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_11590 PF07702 UTRA domain NtRootC45_11600 PF13419 Haloacid dehalogenase-like hydrolase NtRootC45_11620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_11620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_11630 PF00005 ABC transporter NtRootC45_11650 PF13407 Periplasmic binding protein domain NtRootC45_11660 PF02653 Branched-chain amino acid transport system / permease component NtRootC45_11670 PF00005 ABC transporter NtRootC45_11680 PF00480 ROK family NtRootC45_11680 PF01047 MarR family NtRootC45_11690 PF00795 Carbon-nitrogen hydrolase NtRootC45_11710 PF01168 Alanine racemase, N-terminal domain NtRootC45_11710 PF00842 Alanine racemase, C-terminal domain NtRootC45_11730 PF13520 Amino acid permease NtRootC45_11740 PF01593 Flavin containing amine oxidoreductase NtRootC45_11740 PF02027 RolB/RolC glucosidase family NtRootC45_11750 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootC45_11760 PF13649 Methyltransferase domain NtRootC45_11770 PF00551 Formyl transferase NtRootC45_11780 PF00464 Serine hydroxymethyltransferase NtRootC45_11790 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NtRootC45_11790 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NtRootC45_11800 PF00230 Major intrinsic protein NtRootC45_11810 PF00005 ABC transporter NtRootC45_11850 PF03372 Endonuclease/Exonuclease/phosphatase family NtRootC45_11860 PF00579 tRNA synthetases class I (W and Y) NtRootC45_11930 PF13085 2Fe-2S iron-sulfur cluster binding domain NtRootC45_11940 PF00890 FAD binding domain NtRootC45_11940 PF02910 Fumarate reductase flavoprotein C-term NtRootC45_11960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NtRootC45_11970 PF01050 Mannose-6-phosphate isomerase NtRootC45_11970 PF00483 Nucleotidyl transferase NtRootC45_11980 PF01546 Peptidase family M20/M25/M40 NtRootC45_11980 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootC45_11990 PF01047 MarR family NtRootC45_12000 PF02566 OsmC-like protein NtRootC45_12010 PF16884 N-terminal domain of oxidoreductase NtRootC45_12010 PF00107 Zinc-binding dehydrogenase NtRootC45_12020 PF02608 ABC transporter substrate-binding protein PnrA-like NtRootC45_12030 PF00005 ABC transporter NtRootC45_12040 PF02653 Branched-chain amino acid transport system / permease component NtRootC45_12050 PF02653 Branched-chain amino acid transport system / permease component NtRootC45_12060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootC45_12070 PF02885 Glycosyl transferase family, helical bundle domain NtRootC45_12070 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NtRootC45_12070 PF00591 Glycosyl transferase family, a/b domain NtRootC45_12090 PF09335 SNARE associated Golgi protein NtRootC45_12100 PF00962 Adenosine/AMP deaminase NtRootC45_12110 PF03819 MazG nucleotide pyrophosphohydrolase domain NtRootC45_12120 PF00113 Enolase, C-terminal TIM barrel domain NtRootC45_12120 PF03952 Enolase, N-terminal domain NtRootC45_12150 PF02541 Ppx/GppA phosphatase family NtRootC45_12160 PF00082 Subtilase family NtRootC45_12170 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_12180 PF00583 Acetyltransferase (GNAT) family NtRootC45_12220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_12220 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_12220 PF00672 HAMP domain NtRootC45_12230 PF00072 Response regulator receiver domain NtRootC45_12230 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_12260 PF00005 ABC transporter NtRootC45_12260 PF02687 FtsX-like permease family NtRootC45_12260 PF12704 MacB-like periplasmic core domain NtRootC45_12270 PF00005 ABC transporter NtRootC45_12270 PF02687 FtsX-like permease family NtRootC45_12270 PF12704 MacB-like periplasmic core domain NtRootC45_12300 PF00005 ABC transporter NtRootC45_12310 PF00005 ABC transporter NtRootC45_12310 PF12399 Branched-chain amino acid ATP-binding cassette transporter NtRootC45_12320 PF11862 Domain of unknown function (DUF3382) NtRootC45_12320 PF02653 Branched-chain amino acid transport system / permease component NtRootC45_12330 PF02653 Branched-chain amino acid transport system / permease component NtRootC45_12350 PF02803 Thiolase, C-terminal domain NtRootC45_12350 PF00108 Thiolase, N-terminal domain NtRootC45_12360 PF00288 GHMP kinases N terminal domain NtRootC45_12360 PF10509 Galactokinase galactose-binding signature NtRootC45_12360 PF08544 GHMP kinases C terminal NtRootC45_12370 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NtRootC45_12370 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NtRootC45_12380 PF01263 Aldose 1-epimerase NtRootC45_12390 PF01594 AI-2E family transporter NtRootC45_12400 PF13291 ACT domain NtRootC45_12400 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC45_12410 PF01694 Rhomboid family NtRootC45_12420 PF01272 Transcription elongation factor, GreA/GreB, C-term NtRootC45_12420 PF03449 Transcription elongation factor, N-terminal NtRootC45_12440 PF02585 GlcNAc-PI de-N-acetylase NtRootC45_12460 PF03006 Haemolysin-III related NtRootC45_12470 PF01255 Putative undecaprenyl diphosphate synthase NtRootC45_12480 PF02562 PhoH-like protein NtRootC45_12480 PF13638 PIN domain NtRootC45_12530 PF07690 Major Facilitator Superfamily NtRootC45_12550 PF00206 Lyase NtRootC45_12550 PF10415 Fumarase C C-terminus NtRootC45_12560 PF00484 Carbonic anhydrase NtRootC45_12580 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NtRootC45_12600 PF01238 Phosphomannose isomerase type I NtRootC45_12620 PF00731 AIR carboxylase NtRootC45_12630 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NtRootC45_12630 PF02222 ATP-grasp domain NtRootC45_12660 PF02467 Transcription factor WhiB NtRootC45_12670 PF00534 Glycosyl transferases group 1 NtRootC45_12670 PF00535 Glycosyl transferase family 2 NtRootC45_12720 PF05221 S-adenosyl-L-homocysteine hydrolase NtRootC45_12720 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NtRootC45_12730 PF17964 Bacterial Ig domain NtRootC45_12730 PF03734 L,D-transpeptidase catalytic domain NtRootC45_12740 PF00805 Pentapeptide repeats (8 copies) NtRootC45_12780 PF00501 AMP-binding enzyme NtRootC45_12790 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NtRootC45_12790 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase NtRootC45_12800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NtRootC45_12810 PF00171 Aldehyde dehydrogenase family NtRootC45_12840 PF07726 ATPase family associated with various cellular activities (AAA) NtRootC45_12840 PF17863 AAA lid domain NtRootC45_12850 PF01026 TatD related DNase NtRootC45_12860 PF07501 G5 domain NtRootC45_12860 PF06737 Transglycosylase-like domain NtRootC45_12860 PF03990 G5-linked-Ubiquitin-like domain NtRootC45_12870 PF00398 Ribosomal RNA adenine dimethylase NtRootC45_12880 PF08544 GHMP kinases C terminal NtRootC45_12880 PF00288 GHMP kinases N terminal domain NtRootC45_12890 PF00005 ABC transporter NtRootC45_12890 PF16326 ABC transporter C-terminal domain NtRootC45_12890 PF12848 ABC transporter NtRootC45_12910 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_12920 PF12804 MobA-like NTP transferase domain NtRootC45_12920 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootC45_12930 PF14572 Phosphoribosyl synthetase-associated domain NtRootC45_12930 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NtRootC45_12940 PF01386 Ribosomal L25p family NtRootC45_12940 PF14693 Ribosomal protein TL5, C-terminal domain NtRootC45_12950 PF01195 Peptidyl-tRNA hydrolase NtRootC45_12970 PF00196 Bacterial regulatory proteins, luxR family NtRootC45_12970 PF00072 Response regulator receiver domain NtRootC45_12990 PF00266 Aminotransferase class-V NtRootC45_13000 PF01592 NifU-like N terminal domain NtRootC45_13010 PF06965 Na+/H+ antiporter 1 NtRootC45_13040 PF11066 Protein of unknown function (DUF2867) NtRootC45_13040 PF13460 NAD(P)H-binding NtRootC45_13050 PF02559 CarD-like/TRCF domain NtRootC45_13050 PF00270 DEAD/DEAH box helicase NtRootC45_13050 PF00271 Helicase conserved C-terminal domain NtRootC45_13050 PF03461 TRCF domain NtRootC45_13050 PF17757 UvrB interaction domain NtRootC45_13060 PF04307 LexA-binding, inner membrane-associated putative hydrolase NtRootC45_13080 PF01791 DeoC/LacD family aldolase NtRootC45_13100 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_13100 PF18113 Rubredoxin binding C-terminal domain NtRootC45_13170 PF05199 GMC oxidoreductase NtRootC45_13220 PF00717 Peptidase S24-like NtRootC45_13230 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_13240 PF00083 Sugar (and other) transporter NtRootC45_13260 PF13438 Domain of unknown function (DUF4113) NtRootC45_13260 PF00817 impB/mucB/samB family NtRootC45_13260 PF11799 impB/mucB/samB family C-terminal domain NtRootC45_13260 PF11798 IMS family HHH motif NtRootC45_13280 PF02602 Uroporphyrinogen-III synthase HemD NtRootC45_13280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NtRootC45_13290 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_13290 PF18267 Rubredoxin NAD+ reductase C-terminal domain NtRootC45_13290 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NtRootC45_13290 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NtRootC45_13290 PF04324 BFD-like [2Fe-2S] binding domain NtRootC45_13310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootC45_13310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootC45_13310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootC45_13310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootC45_13320 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootC45_13320 PF08244 Glycosyl hydrolases family 32 C terminal NtRootC45_13330 PF02435 Levansucrase/Invertase NtRootC45_13340 PF01048 Phosphorylase superfamily NtRootC45_13350 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_13350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootC45_13370 PF14759 Reductase C-terminal NtRootC45_13370 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_13380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NtRootC45_13380 PF01568 Molydopterin dinucleotide binding domain NtRootC45_13380 PF00384 Molybdopterin oxidoreductase NtRootC45_13390 PF07690 Major Facilitator Superfamily NtRootC45_13400 PF00083 Sugar (and other) transporter NtRootC45_13400 PF07690 Major Facilitator Superfamily NtRootC45_13410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootC45_13410 PF00289 Biotin carboxylase, N-terminal domain NtRootC45_13410 PF00364 Biotin-requiring enzyme NtRootC45_13410 PF02785 Biotin carboxylase C-terminal domain NtRootC45_13420 PF02545 Maf-like protein NtRootC45_13430 PF03176 MMPL family NtRootC45_13440 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_13450 PF01906 Putative heavy-metal-binding NtRootC45_13460 PF00375 Sodium:dicarboxylate symporter family NtRootC45_13490 PF01039 Carboxyl transferase domain NtRootC45_13510 PF02237 Biotin protein ligase C terminal domain NtRootC45_13510 PF03099 Biotin/lipoate A/B protein ligase family NtRootC45_13510 PF08279 HTH domain NtRootC45_13530 PF00211 Adenylate and Guanylate cyclase catalytic domain NtRootC45_13530 PF16701 Adenylate cyclase regulatory domain NtRootC45_13560 PF07726 ATPase family associated with various cellular activities (AAA) NtRootC45_13560 PF17863 AAA lid domain NtRootC45_13620 PF13191 AAA ATPase domain NtRootC45_13620 PF00069 Protein kinase domain NtRootC45_13640 PF01580 FtsK/SpoIIIE family NtRootC45_13640 PF12538 DNA transporter NtRootC45_13650 PF00533 BRCA1 C Terminus (BRCT) domain NtRootC45_13650 PF01653 NAD-dependent DNA ligase adenylation domain NtRootC45_13650 PF03120 NAD-dependent DNA ligase OB-fold domain NtRootC45_13650 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NtRootC45_13650 PF12826 Helix-hairpin-helix motif NtRootC45_13660 PF00459 Inositol monophosphatase family NtRootC45_13680 PF00296 Luciferase-like monooxygenase NtRootC45_13720 PF00072 Response regulator receiver domain NtRootC45_13740 PF03600 Citrate transporter NtRootC45_13750 PF03816 Cell envelope-related transcriptional attenuator domain NtRootC45_13770 PF02686 Glu-tRNAGln amidotransferase C subunit NtRootC45_13780 PF01425 Amidase NtRootC45_13790 PF02934 GatB/GatE catalytic domain NtRootC45_13790 PF02637 GatB domain NtRootC45_13810 PF03781 Sulfatase-modifying factor enzyme 1 NtRootC45_13820 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_13830 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_13850 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_13870 PF03466 LysR substrate binding domain NtRootC45_13870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_13880 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_13880 PF00107 Zinc-binding dehydrogenase NtRootC45_13890 PF00155 Aminotransferase class I and II NtRootC45_13910 PF01979 Amidohydrolase family NtRootC45_13920 PF17974 Galactose-binding domain-like NtRootC45_13920 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase NtRootC45_13920 PF08305 NPCBM/NEW2 domain NtRootC45_13920 PF12905 Endo-alpha-N-acetylgalactosaminidase NtRootC45_13920 PF17451 Glycosyl hydrolase 101 beta sandwich domain NtRootC45_13920 PF18080 Galactose mutarotase-like fold domain NtRootC45_13930 PF01380 SIS domain NtRootC45_13950 PF00294 pfkB family carbohydrate kinase NtRootC45_13960 PF01116 Fructose-bisphosphate aldolase class-II NtRootC45_13970 PF08220 DeoR-like helix-turn-helix domain NtRootC45_13970 PF00455 DeoR C terminal sensor domain NtRootC45_13980 PF00300 Histidine phosphatase superfamily (branch 1) NtRootC45_14010 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootC45_14020 PF00561 alpha/beta hydrolase fold NtRootC45_14090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootC45_14090 PF03129 Anticodon binding domain NtRootC45_14110 PF01565 FAD binding domain NtRootC45_14110 PF08031 Berberine and berberine like NtRootC45_14130 PF03649 Uncharacterised protein family (UPF0014) NtRootC45_14140 PF00672 HAMP domain NtRootC45_14140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_14140 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_14150 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_14150 PF00072 Response regulator receiver domain NtRootC45_14160 PF09335 SNARE associated Golgi protein NtRootC45_14170 PF01569 PAP2 superfamily NtRootC45_14190 PF00005 ABC transporter NtRootC45_14210 PF07730 Histidine kinase NtRootC45_14210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_14220 PF00072 Response regulator receiver domain NtRootC45_14220 PF00196 Bacterial regulatory proteins, luxR family NtRootC45_14230 PF01207 Dihydrouridine synthase (Dus) NtRootC45_14240 PF13286 Phosphohydrolase-associated domain NtRootC45_14240 PF01966 HD domain NtRootC45_14250 PF08278 DNA primase DnaG DnaB-binding NtRootC45_14250 PF10410 DnaB-helicase binding domain of primase NtRootC45_14250 PF13662 Toprim domain NtRootC45_14250 PF01807 CHC2 zinc finger NtRootC45_14250 PF08275 DNA primase catalytic core, N-terminal domain NtRootC45_14270 PF00756 Putative esterase NtRootC45_14280 PF09924 Uncharacterised conserved protein (DUF2156) NtRootC45_14300 PF07690 Major Facilitator Superfamily NtRootC45_14320 PF01066 CDP-alcohol phosphatidyltransferase NtRootC45_14340 PF08323 Starch synthase catalytic domain NtRootC45_14350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC45_14350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC45_14350 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC45_14360 PF01551 Peptidase family M23 NtRootC45_14370 PF00318 Ribosomal protein S2 NtRootC45_14380 PF00889 Elongation factor TS NtRootC45_14390 PF00696 Amino acid kinase family NtRootC45_14400 PF01765 Ribosome recycling factor NtRootC45_14440 PF00474 Sodium:solute symporter family NtRootC45_14460 PF04397 LytTr DNA-binding domain NtRootC45_14460 PF00072 Response regulator receiver domain NtRootC45_14470 PF07694 5TMR of 5TMR-LYT NtRootC45_14470 PF06580 Histidine kinase NtRootC45_14490 PF00474 Sodium:solute symporter family NtRootC45_14500 PF02811 PHP domain NtRootC45_14500 PF14791 DNA polymerase beta thumb NtRootC45_14500 PF14716 Helix-hairpin-helix domain NtRootC45_14540 PF01037 Lrp/AsnC ligand binding domain NtRootC45_14550 PF00676 Dehydrogenase E1 component NtRootC45_14560 PF02779 Transketolase, pyrimidine binding domain NtRootC45_14560 PF02780 Transketolase, C-terminal domain NtRootC45_14570 PF02817 e3 binding domain NtRootC45_14570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootC45_14570 PF00364 Biotin-requiring enzyme NtRootC45_14580 PF16363 GDP-mannose 4,6 dehydratase NtRootC45_14610 PF01039 Carboxyl transferase domain NtRootC45_14620 PF00364 Biotin-requiring enzyme NtRootC45_14620 PF00289 Biotin carboxylase, N-terminal domain NtRootC45_14620 PF02785 Biotin carboxylase C-terminal domain NtRootC45_14620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootC45_14630 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC45_14630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC45_14630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC45_14640 PF01144 Coenzyme A transferase NtRootC45_14650 PF01144 Coenzyme A transferase NtRootC45_14670 PF03328 HpcH/HpaI aldolase/citrate lyase family NtRootC45_14680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_14680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_14710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_14710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_14720 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_14730 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_14740 PF01547 Bacterial extracellular solute-binding protein NtRootC45_14750 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_14770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NtRootC45_14770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NtRootC45_14770 PF13288 DXP reductoisomerase C-terminal domain NtRootC45_14780 PF02163 Peptidase family M50 NtRootC45_14780 PF17820 PDZ domain NtRootC45_14800 PF04551 GcpE protein NtRootC45_14830 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_14850 PF00005 ABC transporter NtRootC45_14870 PF03129 Anticodon binding domain NtRootC45_14870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootC45_14870 PF04073 Aminoacyl-tRNA editing domain NtRootC45_14880 PF01925 Sulfite exporter TauE/SafE NtRootC45_14890 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NtRootC45_14920 PF17384 RimP C-terminal SH3 domain NtRootC45_14920 PF02576 RimP N-terminal domain NtRootC45_14930 PF13184 NusA-like KH domain NtRootC45_14930 PF08529 NusA N-terminal domain NtRootC45_14950 PF11987 Translation-initiation factor 2 NtRootC45_14950 PF00009 Elongation factor Tu GTP binding domain NtRootC45_14950 PF04760 Translation initiation factor IF-2, N-terminal region NtRootC45_14960 PF02033 Ribosome-binding factor A NtRootC45_14970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootC45_14980 PF00155 Aminotransferase class I and II NtRootC45_14990 PF09142 tRNA Pseudouridine synthase II, C terminal NtRootC45_14990 PF16198 tRNA pseudouridylate synthase B C-terminal domain NtRootC45_14990 PF01509 TruB family pseudouridylate synthase (N terminal domain) NtRootC45_15020 PF06574 FAD synthetase NtRootC45_15020 PF01687 Riboflavin kinase NtRootC45_15030 PF00312 Ribosomal protein S15 NtRootC45_15040 PF00013 KH domain NtRootC45_15040 PF00575 S1 RNA binding domain NtRootC45_15040 PF01138 3' exoribonuclease family, domain 1 NtRootC45_15040 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NtRootC45_15050 PF05193 Peptidase M16 inactive domain NtRootC45_15050 PF00675 Insulinase (Peptidase family M16) NtRootC45_15080 PF04055 Radical SAM superfamily NtRootC45_15080 PF06463 Molybdenum Cofactor Synthesis C NtRootC45_15090 PF00072 Response regulator receiver domain NtRootC45_15090 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_15100 PF00672 HAMP domain NtRootC45_15100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_15100 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_15120 PF03453 MoeA N-terminal region (domain I and II) NtRootC45_15120 PF00994 Probable molybdopterin binding domain NtRootC45_15120 PF03454 MoeA C-terminal region (domain IV) NtRootC45_15130 PF01967 MoaC family NtRootC45_15140 PF00994 Probable molybdopterin binding domain NtRootC45_15150 PF02391 MoaE protein NtRootC45_15160 PF05173 Dihydrodipicolinate reductase, C-terminus NtRootC45_15160 PF01113 Dihydrodipicolinate reductase, N-terminus NtRootC45_15200 PF00701 Dihydrodipicolinate synthetase family NtRootC45_15210 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NtRootC45_15210 PF12706 Beta-lactamase superfamily domain NtRootC45_15210 PF17770 Ribonuclease J C-terminal domain NtRootC45_15220 PF17854 FtsK alpha domain NtRootC45_15220 PF09397 Ftsk gamma domain NtRootC45_15220 PF01580 FtsK/SpoIIIE family NtRootC45_15230 PF01066 CDP-alcohol phosphatidyltransferase NtRootC45_15240 PF00994 Probable molybdopterin binding domain NtRootC45_15240 PF18146 Damage-inducible protein CinA KH domain NtRootC45_15240 PF02464 Competence-damaged protein NtRootC45_15280 PF00154 recA bacterial DNA recombination protein NtRootC45_15290 PF02631 RecX family NtRootC45_15300 PF00919 Uncharacterized protein family UPF0004 NtRootC45_15300 PF01938 TRAM domain NtRootC45_15300 PF04055 Radical SAM superfamily NtRootC45_15320 PF01678 Diaminopimelate epimerase NtRootC45_15330 PF05175 Methyltransferase small domain NtRootC45_15340 PF16360 GTP-binding GTPase Middle Region NtRootC45_15340 PF13167 GTP-binding GTPase N-terminal NtRootC45_15340 PF01926 50S ribosome-binding GTPase NtRootC45_15350 PF13307 Helicase C-terminal domain NtRootC45_15360 PF01726 LexA DNA binding domain NtRootC45_15360 PF00717 Peptidase S24-like NtRootC45_15370 PF01476 LysM domain NtRootC45_15390 PF00155 Aminotransferase class I and II NtRootC45_15400 PF00475 Imidazoleglycerol-phosphate dehydratase NtRootC45_15410 PF00117 Glutamine amidotransferase class-I NtRootC45_15430 PF00977 Histidine biosynthesis protein NtRootC45_15480 PF00707 Translation initiation factor IF-3, C-terminal domain NtRootC45_15480 PF05198 Translation initiation factor IF-3, N-terminal domain NtRootC45_15490 PF01632 Ribosomal protein L35 NtRootC45_15500 PF00453 Ribosomal protein L20 NtRootC45_15510 PF08032 RNA 2'-O ribose methyltransferase substrate binding NtRootC45_15510 PF00588 SpoU rRNA Methylase family NtRootC45_15520 PF16916 Dimerisation domain of Zinc Transporter NtRootC45_15520 PF01545 Cation efflux family NtRootC45_15530 PF07690 Major Facilitator Superfamily NtRootC45_15540 PF00293 NUDIX domain NtRootC45_15550 PF04055 Radical SAM superfamily NtRootC45_15560 PF01470 Pyroglutamyl peptidase NtRootC45_15600 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NtRootC45_15600 PF01409 tRNA synthetases class II core domain (F) NtRootC45_15610 PF03483 B3/4 domain NtRootC45_15610 PF03484 tRNA synthetase B5 domain NtRootC45_15610 PF03147 Ferredoxin-fold anticodon binding domain NtRootC45_15610 PF01588 Putative tRNA binding domain NtRootC45_15610 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NtRootC45_15620 PF00089 Trypsin NtRootC45_15660 PF00501 AMP-binding enzyme NtRootC45_15660 PF13193 AMP-binding enzyme C-terminal domain NtRootC45_15660 PF00668 Condensation domain NtRootC45_15660 PF07993 Male sterility protein NtRootC45_15660 PF00550 Phosphopantetheine attachment site NtRootC45_15670 PF00107 Zinc-binding dehydrogenase NtRootC45_15670 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_15690 PF02774 Semialdehyde dehydrogenase, dimerisation domain NtRootC45_15690 PF01118 Semialdehyde dehydrogenase, NAD binding domain NtRootC45_15700 PF01960 ArgJ family NtRootC45_15710 PF00696 Amino acid kinase family NtRootC45_15720 PF00202 Aminotransferase class-III NtRootC45_15730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NtRootC45_15730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NtRootC45_15740 PF01316 Arginine repressor, DNA binding domain NtRootC45_15740 PF02863 Arginine repressor, C-terminal domain NtRootC45_15750 PF00764 Arginosuccinate synthase NtRootC45_15760 PF14698 Argininosuccinate lyase C-terminal NtRootC45_15760 PF00206 Lyase NtRootC45_15780 PF06029 AlkA N-terminal domain NtRootC45_15780 PF00730 HhH-GPD superfamily base excision DNA repair protein NtRootC45_15780 PF02805 Metal binding domain of Ada NtRootC45_15780 PF12833 Helix-turn-helix domain NtRootC45_15790 PF02245 Methylpurine-DNA glycosylase (MPG) NtRootC45_15810 PF00579 tRNA synthetases class I (W and Y) NtRootC45_15850 PF13419 Haloacid dehalogenase-like hydrolase NtRootC45_15870 PF01728 FtsJ-like methyltransferase NtRootC45_15870 PF01479 S4 domain NtRootC45_15880 PF01513 ATP-NAD kinase NtRootC45_15890 PF02463 RecF/RecN/SMC N terminal domain NtRootC45_15900 PF06418 CTP synthase N-terminus NtRootC45_15900 PF00117 Glutamine amidotransferase class-I NtRootC45_15920 PF02899 Phage integrase, N-terminal SAM-like domain NtRootC45_15920 PF00589 Phage integrase family NtRootC45_15960 PF00285 Citrate synthase, C-terminal domain NtRootC45_15980 PF03972 MmgE/PrpD family NtRootC45_15990 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_15990 PF07729 FCD domain NtRootC45_16000 PF00072 Response regulator receiver domain NtRootC45_16000 PF04703 FaeA-like protein NtRootC45_16010 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NtRootC45_16010 PF17203 Single cache domain 3 NtRootC45_16010 PF00989 PAS fold NtRootC45_16010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_16020 PF00375 Sodium:dicarboxylate symporter family NtRootC45_16030 PF13614 AAA domain NtRootC45_16040 PF02616 Segregation and condensation protein ScpA NtRootC45_16050 PF04079 Segregation and condensation complex subunit ScpB NtRootC45_16060 PF00849 RNA pseudouridylate synthase NtRootC45_16060 PF01479 S4 domain NtRootC45_16070 PF02153 Prephenate dehydrogenase NtRootC45_16080 PF02224 Cytidylate kinase NtRootC45_16100 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NtRootC45_16100 PF01926 50S ribosome-binding GTPase NtRootC45_16110 PF01047 MarR family NtRootC45_16120 PF07690 Major Facilitator Superfamily NtRootC45_16140 PF01597 Glycine cleavage H-protein NtRootC45_16150 PF00498 FHA domain NtRootC45_16160 PF00376 MerR family regulatory protein NtRootC45_16170 PF02577 Bifunctional nuclease NtRootC45_16180 PF13411 MerR HTH family regulatory protein NtRootC45_16190 PF13614 AAA domain NtRootC45_16200 PF02785 Biotin carboxylase C-terminal domain NtRootC45_16200 PF00289 Biotin carboxylase, N-terminal domain NtRootC45_16200 PF00364 Biotin-requiring enzyme NtRootC45_16200 PF02436 Conserved carboxylase domain NtRootC45_16200 PF00682 HMGL-like NtRootC45_16200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootC45_16210 PF00501 AMP-binding enzyme NtRootC45_16220 PF00480 ROK family NtRootC45_16240 PF12146 Serine aminopeptidase, S33 NtRootC45_16270 PF01474 Class-II DAHP synthetase family NtRootC45_16280 PF00069 Protein kinase domain NtRootC45_16280 PF03793 PASTA domain NtRootC45_16290 PF05257 CHAP domain NtRootC45_16290 PF01476 LysM domain NtRootC45_16320 PF00348 Polyprenyl synthetase NtRootC45_16350 PF11799 impB/mucB/samB family C-terminal domain NtRootC45_16350 PF00817 impB/mucB/samB family NtRootC45_16370 PF02381 MraZ protein, putative antitoxin-like NtRootC45_16380 PF01795 MraW methylase family NtRootC45_16400 PF03717 Penicillin-binding Protein dimerisation domain NtRootC45_16400 PF00905 Penicillin binding protein transpeptidase domain NtRootC45_16410 PF01225 Mur ligase family, catalytic domain NtRootC45_16410 PF08245 Mur ligase middle domain NtRootC45_16410 PF02875 Mur ligase family, glutamate ligase domain NtRootC45_16420 PF01225 Mur ligase family, catalytic domain NtRootC45_16420 PF02875 Mur ligase family, glutamate ligase domain NtRootC45_16420 PF08245 Mur ligase middle domain NtRootC45_16430 PF00953 Glycosyl transferase family 4 NtRootC45_16440 PF02875 Mur ligase family, glutamate ligase domain NtRootC45_16440 PF08245 Mur ligase middle domain NtRootC45_16450 PF01098 Cell cycle protein NtRootC45_16460 PF04101 Glycosyltransferase family 28 C-terminal domain NtRootC45_16460 PF03033 Glycosyltransferase family 28 N-terminal domain NtRootC45_16470 PF08245 Mur ligase middle domain NtRootC45_16470 PF02875 Mur ligase family, glutamate ligase domain NtRootC45_16470 PF01225 Mur ligase family, catalytic domain NtRootC45_16490 PF12327 FtsZ family, C-terminal domain NtRootC45_16490 PF00091 Tubulin/FtsZ family, GTPase domain NtRootC45_16500 PF02578 Multi-copper polyphenol oxidoreductase laccase NtRootC45_16510 PF01168 Alanine racemase, N-terminal domain NtRootC45_16520 PF04472 Cell division protein SepF NtRootC45_16540 PF05103 DivIVA protein NtRootC45_16550 PF01252 Signal peptidase (SPase) II NtRootC45_16560 PF00849 RNA pseudouridylate synthase NtRootC45_16570 PF07733 Bacterial DNA polymerase III alpha NTPase domain NtRootC45_16570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NtRootC45_16570 PF14579 Helix-hairpin-helix motif NtRootC45_16570 PF02811 PHP domain NtRootC45_16600 PF00815 Histidinol dehydrogenase NtRootC45_16610 PF03477 ATP cone domain NtRootC45_16630 PF00480 ROK family NtRootC45_16640 PF00557 Metallopeptidase family M24 NtRootC45_16660 PF02548 Ketopantoate hydroxymethyltransferase NtRootC45_16670 PF00120 Glutamine synthetase, catalytic domain NtRootC45_16670 PF03951 Glutamine synthetase, beta-Grasp domain NtRootC45_16680 PF08335 GlnD PII-uridylyltransferase NtRootC45_16680 PF03710 Glutamate-ammonia ligase adenylyltransferase NtRootC45_16690 PF16347 Domain of unknown function (DUF4976) NtRootC45_16690 PF00884 Sulfatase NtRootC45_16720 PF03951 Glutamine synthetase, beta-Grasp domain NtRootC45_16720 PF00120 Glutamine synthetase, catalytic domain NtRootC45_16750 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NtRootC45_16750 PF04055 Radical SAM superfamily NtRootC45_16760 PF03099 Biotin/lipoate A/B protein ligase family NtRootC45_16770 PF00069 Protein kinase domain NtRootC45_16770 PF13360 PQQ-like domain NtRootC45_16790 PF03572 Peptidase family S41 NtRootC45_16790 PF14684 Tricorn protease C1 domain NtRootC45_16790 PF14685 Tricorn protease PDZ domain NtRootC45_16790 PF07676 WD40-like Beta Propeller Repeat NtRootC45_16800 PF02566 OsmC-like protein NtRootC45_16830 PF02817 e3 binding domain NtRootC45_16830 PF00364 Biotin-requiring enzyme NtRootC45_16830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootC45_16840 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_16840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootC45_16850 PF02789 Cytosol aminopeptidase family, N-terminal domain NtRootC45_16850 PF00883 Cytosol aminopeptidase family, catalytic domain NtRootC45_16900 PF04542 Sigma-70 region 2 NtRootC45_16900 PF04545 Sigma-70, region 4 NtRootC45_16900 PF04539 Sigma-70 region 3 NtRootC45_16900 PF00140 Sigma-70 factor, region 1.2 NtRootC45_16920 PF01751 Toprim domain NtRootC45_16920 PF00204 DNA gyrase B NtRootC45_16920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_16920 PF00986 DNA gyrase B subunit, carboxyl terminus NtRootC45_16950 PF03965 Penicillinase repressor NtRootC45_16960 PF01654 Cytochrome bd terminal oxidase subunit I NtRootC45_16970 PF02322 Cytochrome bd terminal oxidase subunit II NtRootC45_16980 PF00005 ABC transporter NtRootC45_16980 PF00664 ABC transporter transmembrane region NtRootC45_17020 PF03989 DNA gyrase C-terminal domain, beta-propeller NtRootC45_17020 PF00521 DNA gyrase/topoisomerase IV, subunit A NtRootC45_17030 PF00583 Acetyltransferase (GNAT) family NtRootC45_17030 PF13380 CoA binding domain NtRootC45_17030 PF13607 Succinyl-CoA ligase like flavodoxin domain NtRootC45_17060 PF00265 Thymidine kinase NtRootC45_17070 PF11268 Protein of unknown function (DUF3071) NtRootC45_17110 PF00692 dUTPase NtRootC45_17150 PF02254 TrkA-N domain NtRootC45_17150 PF02080 TrkA-C domain NtRootC45_17160 PF02080 TrkA-C domain NtRootC45_17160 PF02254 TrkA-N domain NtRootC45_17180 PF13520 Amino acid permease NtRootC45_17190 PF01938 TRAM domain NtRootC45_17190 PF05958 tRNA (Uracil-5-)-methyltransferase NtRootC45_17200 PF00330 Aconitase family (aconitate hydratase) NtRootC45_17200 PF00694 Aconitase C-terminal domain NtRootC45_17210 PF02780 Transketolase, C-terminal domain NtRootC45_17210 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NtRootC45_17210 PF02779 Transketolase, pyrimidine binding domain NtRootC45_17250 PF00248 Aldo/keto reductase family NtRootC45_17260 PF00378 Enoyl-CoA hydratase/isomerase NtRootC45_17260 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootC45_17260 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootC45_17270 PF00108 Thiolase, N-terminal domain NtRootC45_17270 PF02803 Thiolase, C-terminal domain NtRootC45_17280 PF01612 3'-5' exonuclease NtRootC45_17280 PF00570 HRDC domain NtRootC45_17300 PF01212 Beta-eliminating lyase NtRootC45_17330 PF01641 SelR domain NtRootC45_17360 PF04073 Aminoacyl-tRNA editing domain NtRootC45_17370 PF02657 Fe-S metabolism associated domain NtRootC45_17380 PF00581 Rhodanese-like domain NtRootC45_17390 PF00308 Bacterial dnaA protein NtRootC45_17390 PF08299 Bacterial dnaA protein helix-turn-helix NtRootC45_17390 PF11638 DnaA N-terminal domain NtRootC45_17400 PF03594 Benzoate membrane transport protein NtRootC45_17420 PF13520 Amino acid permease NtRootC45_17440 PF01327 Polypeptide deformylase NtRootC45_17450 PF00551 Formyl transferase NtRootC45_17450 PF02911 Formyl transferase, C-terminal domain NtRootC45_17460 PF01189 16S rRNA methyltransferase RsmB/F NtRootC45_17460 PF01029 NusB family NtRootC45_17470 PF00834 Ribulose-phosphate 3 epimerase family NtRootC45_17490 PF01872 RibD C-terminal domain NtRootC45_17490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootC45_17500 PF00677 Lumazine binding domain NtRootC45_17510 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NtRootC45_17510 PF00925 GTP cyclohydrolase II NtRootC45_17520 PF00925 GTP cyclohydrolase II NtRootC45_17520 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NtRootC45_17530 PF00885 6,7-dimethyl-8-ribityllumazine synthase NtRootC45_17540 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NtRootC45_17550 PF01634 ATP phosphoribosyltransferase NtRootC45_17550 PF08029 HisG, C-terminal domain NtRootC45_17560 PF00977 Histidine biosynthesis protein NtRootC45_17580 PF01502 Phosphoribosyl-AMP cyclohydrolase NtRootC45_17590 PF04715 Anthranilate synthase component I, N terminal region NtRootC45_17590 PF00425 chorismate binding enzyme NtRootC45_17620 PF00218 Indole-3-glycerol phosphate synthase NtRootC45_17630 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC45_17640 PF00290 Tryptophan synthase alpha chain NtRootC45_17650 PF01790 Prolipoprotein diacylglyceryl transferase NtRootC45_17660 PF01645 Conserved region in glutamate synthase NtRootC45_17660 PF04898 Glutamate synthase central domain NtRootC45_17660 PF01493 GXGXG motif NtRootC45_17660 PF00310 Glutamine amidotransferases class-II NtRootC45_17670 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_17670 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NtRootC45_17680 PF02887 Pyruvate kinase, alpha/beta domain NtRootC45_17680 PF00224 Pyruvate kinase, barrel domain NtRootC45_17690 PF03861 ANTAR domain NtRootC45_17690 PF00072 Response regulator receiver domain NtRootC45_17720 PF02954 Bacterial regulatory protein, Fis family NtRootC45_17720 PF00072 Response regulator receiver domain NtRootC45_17720 PF00158 Sigma-54 interaction domain NtRootC45_17730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC45_17730 PF01842 ACT domain NtRootC45_17730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootC45_17740 PF00202 Aminotransferase class-III NtRootC45_17750 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC45_17760 PF01968 Hydantoinase/oxoprolinase NtRootC45_17760 PF05378 Hydantoinase/oxoprolinase N-terminal region NtRootC45_17780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_17780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_17790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC45_17790 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC45_17790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC45_17800 PF00171 Aldehyde dehydrogenase family NtRootC45_17810 PF10518 TAT (twin-arginine translocation) pathway signal sequence NtRootC45_17810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_17830 PF00920 Dehydratase family NtRootC45_17840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC45_17860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_17860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_17880 PF00005 ABC transporter NtRootC45_17890 PF02653 Branched-chain amino acid transport system / permease component NtRootC45_17900 PF13407 Periplasmic binding protein domain NtRootC45_17910 PF01565 FAD binding domain NtRootC45_17910 PF13183 4Fe-4S dicluster domain NtRootC45_17910 PF02913 FAD linked oxidases, C-terminal domain NtRootC45_17970 PF01261 Xylose isomerase-like TIM barrel NtRootC45_17980 PF08946 Osmosensory transporter coiled coil NtRootC45_17980 PF00083 Sugar (and other) transporter NtRootC45_17990 PF02224 Cytidylate kinase NtRootC45_18000 PF01081 KDPG and KHG aldolase NtRootC45_18020 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_18090 PF00106 short chain dehydrogenase NtRootC45_18110 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_18120 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_18120 PF14785 Maltose transport system permease protein MalF P2 domain NtRootC45_18140 PF03315 Serine dehydratase beta chain NtRootC45_18140 PF03313 Serine dehydratase alpha chain NtRootC45_18150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_18150 PF03466 LysR substrate binding domain NtRootC45_18170 PF07690 Major Facilitator Superfamily NtRootC45_18200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootC45_18200 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_18210 PF01638 HxlR-like helix-turn-helix NtRootC45_18240 PF06736 Protein of unknown function (DUF1211) NtRootC45_18250 PF06628 Catalase-related immune-responsive NtRootC45_18250 PF18011 C-terminal domain found in long catalases NtRootC45_18250 PF00199 Catalase NtRootC45_18280 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_18300 PF00012 Hsp70 protein NtRootC45_18310 PF01025 GrpE NtRootC45_18320 PF00226 DnaJ domain NtRootC45_18320 PF01556 DnaJ C terminal domain NtRootC45_18340 PF07724 AAA domain (Cdc48 subfamily) NtRootC45_18340 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC45_18340 PF17871 AAA lid domain NtRootC45_18340 PF02861 Clp amino terminal domain, pathogenicity island component NtRootC45_18340 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootC45_18350 PF00085 Thioredoxin NtRootC45_18360 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_18370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootC45_18380 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_18390 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_18390 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootC45_18400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC45_18400 PF00005 ABC transporter NtRootC45_18410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC45_18410 PF00005 ABC transporter NtRootC45_18420 PF08244 Glycosyl hydrolases family 32 C terminal NtRootC45_18420 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootC45_18430 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootC45_18430 PF08244 Glycosyl hydrolases family 32 C terminal NtRootC45_18440 PF07729 FCD domain NtRootC45_18440 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_18460 PF01266 FAD dependent oxidoreductase NtRootC45_18490 PF01042 Endoribonuclease L-PSP NtRootC45_18540 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_18540 PF07729 FCD domain NtRootC45_18550 PF00171 Aldehyde dehydrogenase family NtRootC45_18560 PF00202 Aminotransferase class-III NtRootC45_18580 PF00005 ABC transporter NtRootC45_18590 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_18600 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC45_18620 PF01266 FAD dependent oxidoreductase NtRootC45_18630 PF00171 Aldehyde dehydrogenase family NtRootC45_18640 PF00180 Isocitrate/isopropylmalate dehydrogenase NtRootC45_18650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC45_18670 PF00107 Zinc-binding dehydrogenase NtRootC45_18670 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_18680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootC45_18690 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_18700 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_18710 PF00005 ABC transporter NtRootC45_18710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC45_18720 PF16295 Tetracyclin repressor-like, C-terminal domain NtRootC45_18720 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_18730 PF00561 alpha/beta hydrolase fold NtRootC45_18740 PF14765 Polyketide synthase dehydratase NtRootC45_18740 PF00550 Phosphopantetheine attachment site NtRootC45_18740 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootC45_18740 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootC45_18740 PF16197 Ketoacyl-synthetase C-terminal extension NtRootC45_18740 PF00698 Acyl transferase domain NtRootC45_18740 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_18740 PF08659 KR domain NtRootC45_18810 PF00582 Universal stress protein family NtRootC45_18850 PF13185 GAF domain NtRootC45_18850 PF13492 GAF domain NtRootC45_18850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_18850 PF07730 Histidine kinase NtRootC45_18860 PF00582 Universal stress protein family NtRootC45_18880 PF00582 Universal stress protein family NtRootC45_18890 PF00582 Universal stress protein family NtRootC45_18900 PF00753 Metallo-beta-lactamase superfamily NtRootC45_18900 PF10996 Beta-Casp domain NtRootC45_18900 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NtRootC45_18920 PF00072 Response regulator receiver domain NtRootC45_18920 PF00196 Bacterial regulatory proteins, luxR family NtRootC45_18930 PF07730 Histidine kinase NtRootC45_18930 PF13492 GAF domain NtRootC45_18930 PF13185 GAF domain NtRootC45_18930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_18960 PF13823 Alcohol dehydrogenase GroES-associated NtRootC45_18960 PF00107 Zinc-binding dehydrogenase NtRootC45_18960 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_18970 PF00403 Heavy-metal-associated domain NtRootC45_18990 PF01515 Phosphate acetyl/butaryl transferase NtRootC45_18990 PF07085 DRTGG domain NtRootC45_19000 PF00582 Universal stress protein family NtRootC45_19010 PF00690 Cation transporter/ATPase, N-terminus NtRootC45_19010 PF00689 Cation transporting ATPase, C-terminus NtRootC45_19030 PF00582 Universal stress protein family NtRootC45_19040 PF00871 Acetokinase family NtRootC45_19050 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase NtRootC45_19050 PF09363 XFP C-terminal domain NtRootC45_19050 PF09364 XFP N-terminal domain NtRootC45_19070 PF17866 AAA lid domain NtRootC45_19070 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC45_19160 PF00391 PEP-utilising enzyme, mobile domain NtRootC45_19160 PF02896 PEP-utilising enzyme, TIM barrel domain NtRootC45_19160 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootC45_19170 PF03618 Kinase/pyrophosphorylase NtRootC45_19180 PF01037 Lrp/AsnC ligand binding domain NtRootC45_19190 PF00206 Lyase NtRootC45_19190 PF10415 Fumarase C C-terminus NtRootC45_19200 PF00171 Aldehyde dehydrogenase family NtRootC45_19210 PF03447 Homoserine dehydrogenase, NAD binding domain NtRootC45_19210 PF01842 ACT domain NtRootC45_19210 PF00742 Homoserine dehydrogenase NtRootC45_19250 PF04303 PrpF protein NtRootC45_19260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_19260 PF03466 LysR substrate binding domain NtRootC45_19270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_19270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_19290 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_19300 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_19310 PF01547 Bacterial extracellular solute-binding protein NtRootC45_19320 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_19340 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootC45_19340 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootC45_19350 PF00501 AMP-binding enzyme NtRootC45_19360 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NtRootC45_19380 PF00999 Sodium/hydrogen exchanger family NtRootC45_19390 PF13298 DNA polymerase Ligase (LigD) NtRootC45_19390 PF04679 ATP dependent DNA ligase C terminal region NtRootC45_19390 PF01068 ATP dependent DNA ligase domain NtRootC45_19410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC45_19410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC45_19410 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC45_19420 PF17755 UvrA DNA-binding domain NtRootC45_19440 PF00472 RF-1 domain NtRootC45_19440 PF03462 PCRF domain NtRootC45_19530 PF01546 Peptidase family M20/M25/M40 NtRootC45_19530 PF07687 Peptidase dimerisation domain NtRootC45_19540 PF00171 Aldehyde dehydrogenase family NtRootC45_19550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootC45_19550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC45_19560 PF01380 SIS domain NtRootC45_19560 PF01418 Helix-turn-helix domain, rpiR family NtRootC45_19570 PF01494 FAD binding domain NtRootC45_19570 PF07976 Phenol hydroxylase, C-terminal dimerisation domain NtRootC45_19580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NtRootC45_19580 PF01367 5'-3' exonuclease, C-terminal SAM fold NtRootC45_19600 PF03795 YCII-related domain NtRootC45_19610 PF08281 Sigma-70, region 4 NtRootC45_19610 PF04542 Sigma-70 region 2 NtRootC45_19640 PF00107 Zinc-binding dehydrogenase NtRootC45_19640 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_19650 PF04408 Helicase associated domain (HA2) NtRootC45_19650 PF00270 DEAD/DEAH box helicase NtRootC45_19650 PF08482 ATP-dependent helicase C-terminal NtRootC45_19650 PF00271 Helicase conserved C-terminal domain NtRootC45_19660 PF01979 Amidohydrolase family NtRootC45_19700 PF03144 Elongation factor Tu domain 2 NtRootC45_19700 PF03764 Elongation factor G, domain IV NtRootC45_19700 PF00009 Elongation factor Tu GTP binding domain NtRootC45_19700 PF14492 Elongation Factor G, domain II NtRootC45_19700 PF00679 Elongation factor G C-terminus NtRootC45_19730 PF01300 Telomere recombination NtRootC45_19750 PF00005 ABC transporter NtRootC45_19770 PF01869 BadF/BadG/BcrA/BcrD ATPase family NtRootC45_19780 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_19780 PF07702 UTRA domain NtRootC45_19790 PF09339 IclR helix-turn-helix domain NtRootC45_19790 PF01614 Bacterial transcriptional regulator NtRootC45_19810 PF00890 FAD binding domain NtRootC45_19830 PF07690 Major Facilitator Superfamily NtRootC45_19830 PF00083 Sugar (and other) transporter NtRootC45_19850 PF00266 Aminotransferase class-V NtRootC45_19860 PF03301 Tryptophan 2,3-dioxygenase NtRootC45_19880 PF01384 Phosphate transporter family NtRootC45_19930 PF03061 Thioesterase superfamily NtRootC45_19940 PF01367 5'-3' exonuclease, C-terminal SAM fold NtRootC45_19940 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NtRootC45_19940 PF00476 DNA polymerase family A NtRootC45_19950 PF17668 Acetyltransferase (GNAT) domain NtRootC45_19950 PF13530 Sterol carrier protein domain NtRootC45_19970 PF00575 S1 RNA binding domain NtRootC45_19980 PF09186 Domain of unknown function (DUF1949) NtRootC45_19980 PF01205 Uncharacterized protein family UPF0029 NtRootC45_19990 PF01121 Dephospho-CoA kinase NtRootC45_19990 PF04229 GrpB protein NtRootC45_20000 PF17757 UvrB interaction domain NtRootC45_20000 PF02151 UvrB/uvrC motif NtRootC45_20000 PF04851 Type III restriction enzyme, res subunit NtRootC45_20000 PF12344 Ultra-violet resistance protein B NtRootC45_20000 PF00271 Helicase conserved C-terminal domain NtRootC45_20010 PF03741 Integral membrane protein TerC family NtRootC45_20020 PF07690 Major Facilitator Superfamily NtRootC45_20030 PF00561 alpha/beta hydrolase fold NtRootC45_20040 PF13673 Acetyltransferase (GNAT) domain NtRootC45_20050 PF02515 CoA-transferase family III NtRootC45_20090 PF17760 UvrA interaction domain NtRootC45_20090 PF17755 UvrA DNA-binding domain NtRootC45_20090 PF00005 ABC transporter NtRootC45_20100 PF13419 Haloacid dehalogenase-like hydrolase NtRootC45_20110 PF01553 Acyltransferase NtRootC45_20110 PF00501 AMP-binding enzyme NtRootC45_20120 PF01541 GIY-YIG catalytic domain NtRootC45_20120 PF12826 Helix-hairpin-helix motif NtRootC45_20120 PF02151 UvrB/uvrC motif NtRootC45_20120 PF08459 UvrC Helix-hairpin-helix N-terminal NtRootC45_20130 PF03668 P-loop ATPase protein family NtRootC45_20140 PF01933 Uncharacterised protein family UPF0052 NtRootC45_20150 PF02650 WhiA C-terminal HTH domain NtRootC45_20150 PF14527 WhiA LAGLIDADG-like domain NtRootC45_20150 PF10298 WhiA N-terminal LAGLIDADG-like domain NtRootC45_20160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NtRootC45_20160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NtRootC45_20170 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NtRootC45_20170 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NtRootC45_20180 PF00162 Phosphoglycerate kinase NtRootC45_20190 PF00121 Triosephosphate isomerase NtRootC45_20200 PF03840 Preprotein translocase SecG subunit NtRootC45_20220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NtRootC45_20240 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NtRootC45_20240 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NtRootC45_20250 PF00342 Phosphoglucose isomerase NtRootC45_20260 PF00923 Transaldolase/Fructose-6-phosphate aldolase NtRootC45_20270 PF02779 Transketolase, pyrimidine binding domain NtRootC45_20270 PF02780 Transketolase, C-terminal domain NtRootC45_20270 PF00456 Transketolase, thiamine diphosphate binding domain NtRootC45_20280 PF01040 UbiA prenyltransferase family NtRootC45_20320 PF00005 ABC transporter NtRootC45_20320 PF02687 FtsX-like permease family NtRootC45_20320 PF12704 MacB-like periplasmic core domain NtRootC45_20330 PF02628 Cytochrome oxidase assembly protein NtRootC45_20350 PF00005 ABC transporter NtRootC45_20370 PF01458 Uncharacterized protein family (UPF0051) NtRootC45_20380 PF01458 Uncharacterized protein family (UPF0051) NtRootC45_20400 PF00005 ABC transporter NtRootC45_20410 PF01883 Iron-sulfur cluster assembly protein NtRootC45_20420 PF04228 Putative neutral zinc metallopeptidase NtRootC45_20430 PF00501 AMP-binding enzyme NtRootC45_20430 PF13193 AMP-binding enzyme C-terminal domain NtRootC45_20440 PF02803 Thiolase, C-terminal domain NtRootC45_20440 PF00108 Thiolase, N-terminal domain NtRootC45_20460 PF00005 ABC transporter NtRootC45_20470 PF02632 BioY family NtRootC45_20480 PF12848 ABC transporter NtRootC45_20480 PF00005 ABC transporter NtRootC45_20480 PF16326 ABC transporter C-terminal domain NtRootC45_20490 PF03129 Anticodon binding domain NtRootC45_20490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootC45_20490 PF04073 Aminoacyl-tRNA editing domain NtRootC45_20550 PF00005 ABC transporter NtRootC45_20590 PF00005 ABC transporter NtRootC45_20610 PF00588 SpoU rRNA Methylase family NtRootC45_20620 PF01197 Ribosomal protein L31 NtRootC45_20630 PF10437 Bacterial lipoate protein ligase C-terminus NtRootC45_20630 PF03099 Biotin/lipoate A/B protein ligase family NtRootC45_20660 PF11838 ERAP1-like C-terminal domain NtRootC45_20660 PF01433 Peptidase family M1 domain NtRootC45_20670 PF03601 Conserved hypothetical protein 698 NtRootC45_20680 PF04174 A circularly permuted ATPgrasp NtRootC45_20700 PF01841 Transglutaminase-like superfamily NtRootC45_20700 PF08379 Bacterial transglutaminase-like N-terminal region NtRootC45_20710 PF00106 short chain dehydrogenase NtRootC45_20720 PF00483 Nucleotidyl transferase NtRootC45_20740 PF13439 Glycosyltransferase Family 4 NtRootC45_20740 PF00534 Glycosyl transferases group 1 NtRootC45_20770 PF00108 Thiolase, N-terminal domain NtRootC45_20770 PF02803 Thiolase, C-terminal domain NtRootC45_20800 PF07687 Peptidase dimerisation domain NtRootC45_20800 PF01546 Peptidase family M20/M25/M40 NtRootC45_20840 PF02397 Bacterial sugar transferase NtRootC45_20850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_20850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_20860 PF16363 GDP-mannose 4,6 dehydratase NtRootC45_20870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NtRootC45_20990 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NtRootC45_21000 PF16363 GDP-mannose 4,6 dehydratase NtRootC45_21010 PF00483 Nucleotidyl transferase NtRootC45_21020 PF00248 Aldo/keto reductase family NtRootC45_21030 PF02673 Bacitracin resistance protein BacA NtRootC45_21040 PF01406 tRNA synthetases class I (C) catalytic domain NtRootC45_21060 PF13419 Haloacid dehalogenase-like hydrolase NtRootC45_21070 PF00571 CBS domain NtRootC45_21070 PF02163 Peptidase family M50 NtRootC45_21080 PF08704 tRNA methyltransferase complex GCD14 subunit NtRootC45_21090 PF17758 Proteasomal ATPase OB N-terminal domain NtRootC45_21090 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC45_21090 PF16450 Proteasomal ATPase OB C-terminal domain NtRootC45_21100 PF03136 Pup-ligase protein NtRootC45_21110 PF05639 Pup-like protein NtRootC45_21120 PF00227 Proteasome subunit NtRootC45_21130 PF00227 Proteasome subunit NtRootC45_21140 PF03136 Pup-ligase protein NtRootC45_21150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NtRootC45_21160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NtRootC45_21170 PF13280 WYL domain NtRootC45_21190 PF02416 mttA/Hcf106 family NtRootC45_21200 PF00902 Sec-independent protein translocase protein (TatC) NtRootC45_21210 PF00270 DEAD/DEAH box helicase NtRootC45_21210 PF08148 DSHCT (NUC185) domain NtRootC45_21210 PF00271 Helicase conserved C-terminal domain NtRootC45_21220 PF07969 Amidohydrolase family NtRootC45_21230 PF00535 Glycosyl transferase family 2 NtRootC45_21240 PF13397 RNA polymerase-binding protein NtRootC45_21250 PF01145 SPFH domain / Band 7 family NtRootC45_21280 PF07676 WD40-like Beta Propeller Repeat NtRootC45_21280 PF00326 Prolyl oligopeptidase family NtRootC45_21290 PF01327 Polypeptide deformylase NtRootC45_21320 PF01494 FAD binding domain NtRootC45_21340 PF02797 Chalcone and stilbene synthases, C-terminal domain NtRootC45_21340 PF00195 Chalcone and stilbene synthases, N-terminal domain NtRootC45_21350 PF00005 ABC transporter NtRootC45_21350 PF17755 UvrA DNA-binding domain NtRootC45_21350 PF17760 UvrA interaction domain NtRootC45_21430 PF00591 Glycosyl transferase family, a/b domain NtRootC45_21430 PF02885 Glycosyl transferase family, helical bundle domain NtRootC45_21440 PF00510 Cytochrome c oxidase subunit III NtRootC45_21450 PF00034 Cytochrome c NtRootC45_21450 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NtRootC45_21460 PF00355 Rieske [2Fe-2S] domain NtRootC45_21470 PF13631 Cytochrome b(N-terminal)/b6/petB NtRootC45_21490 PF07729 FCD domain NtRootC45_21490 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_21500 PF00381 PTS HPr component phosphorylation site NtRootC45_21510 PF12270 Cytochrome c oxidase subunit IV NtRootC45_21520 PF00115 Cytochrome C and Quinol oxidase polypeptide I NtRootC45_21530 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NtRootC45_21540 PF01521 Iron-sulphur cluster biosynthesis NtRootC45_21550 PF07687 Peptidase dimerisation domain NtRootC45_21550 PF01546 Peptidase family M20/M25/M40 NtRootC45_21560 PF11241 Protein of unknown function (DUF3043) NtRootC45_21570 PF01180 Dihydroorotate dehydrogenase NtRootC45_21580 PF00890 FAD binding domain NtRootC45_21610 PF01255 Putative undecaprenyl diphosphate synthase NtRootC45_21620 PF11967 Recombination protein O N terminal NtRootC45_21620 PF02565 Recombination protein O C terminal NtRootC45_21630 PF08502 LeuA allosteric (dimerisation) domain NtRootC45_21630 PF00682 HMGL-like NtRootC45_21640 PF01431 Peptidase family M13 NtRootC45_21640 PF05649 Peptidase family M13 NtRootC45_21650 PF03816 Cell envelope-related transcriptional attenuator domain NtRootC45_21660 PF01926 50S ribosome-binding GTPase NtRootC45_21660 PF07650 KH domain NtRootC45_21670 PF00571 CBS domain NtRootC45_21670 PF03471 Transporter associated domain NtRootC45_21670 PF01595 Cyclin M transmembrane N-terminal domain NtRootC45_21680 PF02130 Uncharacterized protein family UPF0054 NtRootC45_21690 PF02562 PhoH-like protein NtRootC45_21710 PF04452 RNA methyltransferase NtRootC45_21720 PF00226 DnaJ domain NtRootC45_21720 PF01556 DnaJ C terminal domain NtRootC45_21720 PF00684 DnaJ central domain NtRootC45_21730 PF08220 DeoR-like helix-turn-helix domain NtRootC45_21730 PF01628 HrcA protein C terminal domain NtRootC45_21760 PF04055 Radical SAM superfamily NtRootC45_21760 PF06969 HemN C-terminal domain NtRootC45_21770 PF00009 Elongation factor Tu GTP binding domain NtRootC45_21770 PF06421 GTP-binding protein LepA C-terminus NtRootC45_21770 PF00679 Elongation factor G C-terminus NtRootC45_21790 PF01649 Ribosomal protein S20 NtRootC45_21840 PF02645 Uncharacterised protein, DegV family COG1307 NtRootC45_21850 PF00133 tRNA synthetases class I (I, L, M and V) NtRootC45_21850 PF08264 Anticodon-binding domain of tRNA NtRootC45_21850 PF13603 Leucyl-tRNA synthetase, Domain 2 NtRootC45_21850 PF09334 tRNA synthetases class I (M) NtRootC45_21860 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootC45_21860 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootC45_21870 PF00230 Major intrinsic protein NtRootC45_21880 PF01266 FAD dependent oxidoreductase NtRootC45_21880 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NtRootC45_21900 PF04198 Putative sugar-binding domain NtRootC45_21910 PF00248 Aldo/keto reductase family NtRootC45_21930 PF13439 Glycosyltransferase Family 4 NtRootC45_21940 PF17764 3′ DNA-binding domain (3′BD) NtRootC45_21950 PF02772 S-adenosylmethionine synthetase, central domain NtRootC45_21950 PF00438 S-adenosylmethionine synthetase, N-terminal domain NtRootC45_21950 PF02773 S-adenosylmethionine synthetase, C-terminal domain NtRootC45_21960 PF04127 DNA / pantothenate metabolism flavoprotein NtRootC45_21960 PF02441 Flavoprotein NtRootC45_21970 PF01192 RNA polymerase Rpb6 NtRootC45_21980 PF00625 Guanylate kinase NtRootC45_22000 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NtRootC45_22010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootC45_22010 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NtRootC45_22010 PF02142 MGS-like domain NtRootC45_22020 PF00117 Glutamine amidotransferase class-I NtRootC45_22020 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NtRootC45_22040 PF01979 Amidohydrolase family NtRootC45_22050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NtRootC45_22050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NtRootC45_22060 PF00156 Phosphoribosyl transferase domain NtRootC45_22080 PF01029 NusB family NtRootC45_22090 PF01132 Elongation factor P (EF-P) OB domain NtRootC45_22090 PF08207 Elongation factor P (EF-P) KOW-like domain NtRootC45_22090 PF09285 Elongation factor P, C-terminal NtRootC45_22110 PF01761 3-dehydroquinate synthase NtRootC45_22120 PF01202 Shikimate kinase NtRootC45_22130 PF01264 Chorismate synthase NtRootC45_22140 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NtRootC45_22140 PF01488 Shikimate / quinate 5-dehydrogenase NtRootC45_22140 PF08501 Shikimate dehydrogenase substrate binding domain NtRootC45_22160 PF03652 Holliday junction resolvase NtRootC45_22170 PF02272 DHHA1 domain NtRootC45_22170 PF01411 tRNA synthetases class II (A) NtRootC45_22170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NtRootC45_22200 PF01479 S4 domain NtRootC45_22200 PF00163 Ribosomal protein S4/S9 N-terminal domain NtRootC45_22210 PF12002 MgsA AAA+ ATPase C terminal NtRootC45_22210 PF16193 AAA C-terminal domain NtRootC45_22210 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC45_22240 PF00152 tRNA synthetases class II (D, K and N) NtRootC45_22240 PF01336 OB-fold nucleic acid binding domain NtRootC45_22240 PF02938 GAD domain NtRootC45_22250 PF03129 Anticodon binding domain NtRootC45_22250 PF13393 Histidyl-tRNA synthetase NtRootC45_22270 PF03993 Domain of Unknown Function (DUF349) NtRootC45_22290 PF13291 ACT domain NtRootC45_22290 PF04607 Region found in RelA / SpoT proteins NtRootC45_22290 PF02824 TGS domain NtRootC45_22300 PF02355 Protein export membrane protein NtRootC45_22300 PF07549 SecD/SecF GG Motif NtRootC45_22310 PF02355 Protein export membrane protein NtRootC45_22310 PF07549 SecD/SecF GG Motif NtRootC45_22330 PF05496 Holliday junction DNA helicase RuvB P-loop domain NtRootC45_22330 PF05491 RuvB C-terminal winged helix domain NtRootC45_22330 PF17864 RuvB AAA lid domain NtRootC45_22340 PF07499 RuvA, C-terminal domain NtRootC45_22340 PF01330 RuvA N terminal domain NtRootC45_22350 PF02075 Crossover junction endodeoxyribonuclease RuvC NtRootC45_22360 PF01709 Transcriptional regulator NtRootC45_22370 PF01174 SNO glutamine amidotransferase family NtRootC45_22380 PF08353 Domain of unknown function (DUF1727) NtRootC45_22380 PF08245 Mur ligase middle domain NtRootC45_22390 PF07685 CobB/CobQ-like glutamine amidotransferase domain NtRootC45_22410 PF01432 Peptidase family M3 NtRootC45_22420 PF01680 SOR/SNZ family NtRootC45_22430 PF01066 CDP-alcohol phosphatidyltransferase NtRootC45_22440 PF01230 HIT domain NtRootC45_22450 PF03129 Anticodon binding domain NtRootC45_22450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootC45_22450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NtRootC45_22460 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NtRootC45_22460 PF02811 PHP domain NtRootC45_22460 PF07733 Bacterial DNA polymerase III alpha NTPase domain NtRootC45_22460 PF14579 Helix-hairpin-helix motif NtRootC45_22480 PF01494 FAD binding domain NtRootC45_22510 PF02586 SOS response associated peptidase (SRAP) NtRootC45_22520 PF00462 Glutaredoxin NtRootC45_22530 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_22530 PF00107 Zinc-binding dehydrogenase NtRootC45_22540 PF00753 Metallo-beta-lactamase superfamily NtRootC45_22550 PF00384 Molybdopterin oxidoreductase NtRootC45_22550 PF01568 Molydopterin dinucleotide binding domain NtRootC45_22600 PF01494 FAD binding domain NtRootC45_22630 PF17761 DUF1016 N-terminal domain NtRootC45_22630 PF06250 YhcG PDDEXK nuclease domain NtRootC45_22650 PF08402 TOBE domain NtRootC45_22650 PF00005 ABC transporter NtRootC45_22660 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_22680 PF00268 Ribonucleotide reductase, small chain NtRootC45_22690 PF02867 Ribonucleotide reductase, barrel domain NtRootC45_22690 PF00317 Ribonucleotide reductase, all-alpha domain NtRootC45_22690 PF08343 Ribonucleotide reductase N-terminal NtRootC45_22700 PF07972 NrdI Flavodoxin like NtRootC45_22720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_22720 PF03466 LysR substrate binding domain NtRootC45_22790 PF17863 AAA lid domain NtRootC45_22790 PF07726 ATPase family associated with various cellular activities (AAA) NtRootC45_22810 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_22820 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_22840 PF00480 ROK family NtRootC45_22850 PF05175 Methyltransferase small domain NtRootC45_22870 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_22900 PF01467 Cytidylyltransferase-like NtRootC45_22920 PF00171 Aldehyde dehydrogenase family NtRootC45_22930 PF00696 Amino acid kinase family NtRootC45_22930 PF01472 PUA domain NtRootC45_22940 PF09269 Domain of unknown function (DUF1967) NtRootC45_22940 PF01018 GTP1/OBG NtRootC45_22940 PF01926 50S ribosome-binding GTPase NtRootC45_22950 PF01016 Ribosomal L27 protein NtRootC45_22960 PF00829 Ribosomal prokaryotic L21 protein NtRootC45_22970 PF02581 Thiamine monophosphate synthase NtRootC45_22970 PF03070 TENA/THI-4/PQQC family NtRootC45_22970 PF08543 Phosphomethylpyrimidine kinase NtRootC45_22980 PF10150 Ribonuclease E/G family NtRootC45_23000 PF00334 Nucleoside diphosphate kinase NtRootC45_23020 PF08245 Mur ligase middle domain NtRootC45_23020 PF02875 Mur ligase family, glutamate ligase domain NtRootC45_23030 PF08264 Anticodon-binding domain of tRNA NtRootC45_23030 PF00133 tRNA synthetases class I (I, L, M and V) NtRootC45_23050 PF00106 short chain dehydrogenase NtRootC45_23060 PF08264 Anticodon-binding domain of tRNA NtRootC45_23060 PF00133 tRNA synthetases class I (I, L, M and V) NtRootC45_23070 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootC45_23070 PF06827 Zinc finger found in FPG and IleRS NtRootC45_23080 PF01323 DSBA-like thioredoxin domain NtRootC45_23090 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootC45_23090 PF07724 AAA domain (Cdc48 subfamily) NtRootC45_23090 PF06689 ClpX C4-type zinc finger NtRootC45_23100 PF00574 Clp protease NtRootC45_23110 PF00574 Clp protease NtRootC45_23120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NtRootC45_23120 PF05698 Bacterial trigger factor protein (TF) C-terminus NtRootC45_23120 PF05697 Bacterial trigger factor protein (TF) NtRootC45_23130 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NtRootC45_23130 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootC45_23130 PF06827 Zinc finger found in FPG and IleRS NtRootC45_23140 PF02502 Ribose/Galactose Isomerase NtRootC45_23160 PF11838 ERAP1-like C-terminal domain NtRootC45_23160 PF01433 Peptidase family M1 domain NtRootC45_23190 PF00924 Mechanosensitive ion channel NtRootC45_23200 PF01152 Bacterial-like globin NtRootC45_23230 PF00005 ABC transporter NtRootC45_23230 PF12848 ABC transporter NtRootC45_23270 PF00436 Single-strand binding protein family NtRootC45_23300 PF00929 Exonuclease NtRootC45_23310 PF01327 Polypeptide deformylase NtRootC45_23350 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NtRootC45_23350 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NtRootC45_23360 PF03883 Peroxide stress protein YaaA NtRootC45_23370 PF02591 C4-type zinc ribbon domain NtRootC45_23380 PF01784 NIF3 (NGG1p interacting factor 3) NtRootC45_23390 PF01625 Peptide methionine sulfoxide reductase NtRootC45_23400 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC45_23410 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootC45_23420 PF00106 short chain dehydrogenase NtRootC45_23430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC45_23430 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NtRootC45_23440 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_23440 PF07729 FCD domain NtRootC45_23450 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_23450 PF00107 Zinc-binding dehydrogenase NtRootC45_23470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootC45_23470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC45_23480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC45_23490 PF01757 Acyltransferase family NtRootC45_23500 PF00083 Sugar (and other) transporter NtRootC45_23500 PF07690 Major Facilitator Superfamily NtRootC45_23510 PF09339 IclR helix-turn-helix domain NtRootC45_23510 PF01614 Bacterial transcriptional regulator NtRootC45_23540 PF02146 Sir2 family NtRootC45_23550 PF00578 AhpC/TSA family NtRootC45_23560 PF11253 Protein of unknown function (DUF3052) NtRootC45_23570 PF00456 Transketolase, thiamine diphosphate binding domain NtRootC45_23570 PF17831 Pyruvate dehydrogenase E1 component middle domain NtRootC45_23580 PF17853 GGDEF-like domain NtRootC45_23580 PF13556 PucR C-terminal helix-turn-helix domain NtRootC45_23590 PF00698 Acyl transferase domain NtRootC45_23600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootC45_23600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootC45_23610 PF00550 Phosphopantetheine attachment site NtRootC45_23620 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootC45_23620 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootC45_23640 PF02899 Phage integrase, N-terminal SAM-like domain NtRootC45_23640 PF00589 Phage integrase family NtRootC45_23660 PF01078 Magnesium chelatase, subunit ChlI NtRootC45_23660 PF13335 Magnesium chelatase, subunit ChlI C-terminal NtRootC45_23670 PF02021 Uncharacterised protein family UPF0102 NtRootC45_23680 PF10611 Protein of unknown function (DUF2469) NtRootC45_23690 PF01351 Ribonuclease HII NtRootC45_23700 PF10502 Signal peptidase, peptidase S26 NtRootC45_23710 PF10502 Signal peptidase, peptidase S26 NtRootC45_23720 PF01245 Ribosomal protein L19 NtRootC45_23730 PF01746 tRNA (Guanine-1)-methyltransferase NtRootC45_23740 PF01782 RimM N-terminal domain NtRootC45_23760 PF00886 Ribosomal protein S16 NtRootC45_23780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootC45_23790 PF01979 Amidohydrolase family NtRootC45_23800 PF13667 ThiC-associated domain NtRootC45_23800 PF01964 Radical SAM ThiC family NtRootC45_23820 PF00448 SRP54-type protein, GTPase domain NtRootC45_23820 PF02978 Signal peptide binding domain NtRootC45_23820 PF02881 SRP54-type protein, helical bundle domain NtRootC45_23830 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NtRootC45_23830 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NtRootC45_23840 PF00543 Nitrogen regulatory protein P-II NtRootC45_23850 PF00909 Ammonium Transporter Family NtRootC45_23860 PF07690 Major Facilitator Superfamily NtRootC45_23870 PF02881 SRP54-type protein, helical bundle domain NtRootC45_23870 PF00448 SRP54-type protein, GTPase domain NtRootC45_23880 PF06470 SMC proteins Flexible Hinge Domain NtRootC45_23880 PF02463 RecF/RecN/SMC N terminal domain NtRootC45_23930 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NtRootC45_23930 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootC45_23930 PF06827 Zinc finger found in FPG and IleRS NtRootC45_23940 PF00035 Double-stranded RNA binding motif NtRootC45_23940 PF14622 Ribonuclease-III-like NtRootC45_23950 PF01783 Ribosomal L32p protein family NtRootC45_23960 PF02620 Large ribosomal RNA subunit accumulation protein YceD NtRootC45_23970 PF01467 Cytidylyltransferase-like NtRootC45_23980 PF00155 Aminotransferase class I and II NtRootC45_24010 PF00271 Helicase conserved C-terminal domain NtRootC45_24010 PF17191 RecG wedge domain NtRootC45_24010 PF00270 DEAD/DEAH box helicase NtRootC45_24020 PF13684 Dihydroxyacetone kinase family NtRootC45_24020 PF02734 DAK2 domain NtRootC45_24030 PF00586 AIR synthase related protein, N-terminal domain NtRootC45_24030 PF02769 AIR synthase related protein, C-terminal domain NtRootC45_24050 PF07478 D-ala D-ala ligase C-terminus NtRootC45_24050 PF01820 D-ala D-ala ligase N-terminus NtRootC45_24060 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NtRootC45_24060 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NtRootC45_24080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NtRootC45_24090 PF00694 Aconitase C-terminal domain NtRootC45_24100 PF00330 Aconitase family (aconitate hydratase) NtRootC45_24110 PF01614 Bacterial transcriptional regulator NtRootC45_24110 PF09339 IclR helix-turn-helix domain NtRootC45_24160 PF00749 tRNA synthetases class I (E and Q), catalytic domain NtRootC45_24170 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC45_24180 PF00753 Metallo-beta-lactamase superfamily NtRootC45_24180 PF16123 Hydroxyacylglutathione hydrolase C-terminus NtRootC45_24200 PF01063 Amino-transferase class IV NtRootC45_24210 PF00180 Isocitrate/isopropylmalate dehydrogenase NtRootC45_24220 PF07730 Histidine kinase NtRootC45_24230 PF00072 Response regulator receiver domain NtRootC45_24230 PF00196 Bacterial regulatory proteins, luxR family NtRootC45_24240 PF00005 ABC transporter NtRootC45_24240 PF02687 FtsX-like permease family NtRootC45_24240 PF12704 MacB-like periplasmic core domain NtRootC45_24260 PF09334 tRNA synthetases class I (M) NtRootC45_24260 PF08264 Anticodon-binding domain of tRNA NtRootC45_24270 PF00005 ABC transporter NtRootC45_24270 PF02687 FtsX-like permease family NtRootC45_24270 PF12704 MacB-like periplasmic core domain NtRootC45_24290 PF01842 ACT domain NtRootC45_24290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC45_24290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootC45_24300 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NtRootC45_24300 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NtRootC45_24310 PF10369 Small subunit of acetolactate synthase NtRootC45_24320 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC45_24320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC45_24320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC45_24330 PF00920 Dehydratase family NtRootC45_24340 PF03466 LysR substrate binding domain NtRootC45_24340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_24350 PF00573 Ribosomal protein L4/L1 family NtRootC45_24360 PF07995 Glucose / Sorbosone dehydrogenase NtRootC45_24380 PF00578 AhpC/TSA family NtRootC45_24390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootC45_24400 PF06039 Malate:quinone oxidoreductase (Mqo) NtRootC45_24410 PF00873 AcrB/AcrD/AcrF family NtRootC45_24420 PF00296 Luciferase-like monooxygenase NtRootC45_24440 PF08379 Bacterial transglutaminase-like N-terminal region NtRootC45_24440 PF01841 Transglutaminase-like superfamily NtRootC45_24480 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC45_24500 PF00266 Aminotransferase class-V NtRootC45_24510 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NtRootC45_24510 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NtRootC45_24520 PF02910 Fumarate reductase flavoprotein C-term NtRootC45_24520 PF00890 FAD binding domain NtRootC45_24530 PF02445 Quinolinate synthetase A protein NtRootC45_24540 PF00293 NUDIX domain NtRootC45_24550 PF01037 Lrp/AsnC ligand binding domain NtRootC45_24560 PF00324 Amino acid permease NtRootC45_24570 PF00676 Dehydrogenase E1 component NtRootC45_24580 PF02780 Transketolase, C-terminal domain NtRootC45_24580 PF02779 Transketolase, pyrimidine binding domain NtRootC45_24590 PF02817 e3 binding domain NtRootC45_24590 PF00364 Biotin-requiring enzyme NtRootC45_24590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootC45_24620 PF00156 Phosphoribosyl transferase domain NtRootC45_24620 PF05139 Erythromycin esterase NtRootC45_24630 PF07690 Major Facilitator Superfamily NtRootC45_24630 PF00083 Sugar (and other) transporter NtRootC45_24640 PF01614 Bacterial transcriptional regulator NtRootC45_24640 PF09339 IclR helix-turn-helix domain NtRootC45_24650 PF17409 MoaF C-terminal domain NtRootC45_24650 PF10703 MoaF N-terminal domain NtRootC45_24670 PF14525 AraC-binding-like domain NtRootC45_24680 PF16347 Domain of unknown function (DUF4976) NtRootC45_24680 PF00884 Sulfatase NtRootC45_24690 PF00005 ABC transporter NtRootC45_24700 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_24710 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_24730 PF13382 Adenine deaminase C-terminal domain NtRootC45_24730 PF01979 Amidohydrolase family NtRootC45_24760 PF13476 AAA domain NtRootC45_24770 PF00149 Calcineurin-like phosphoesterase NtRootC45_24770 PF12320 Type 5 capsule protein repressor C-terminal domain NtRootC45_24780 PF00230 Major intrinsic protein NtRootC45_24800 PF02656 Domain of unknown function (DUF202) NtRootC45_24850 PF00005 ABC transporter NtRootC45_24870 PF09335 SNARE associated Golgi protein NtRootC45_24880 PF01725 Ham1 family NtRootC45_24890 PF01138 3' exoribonuclease family, domain 1 NtRootC45_24890 PF03725 3' exoribonuclease family, domain 2 NtRootC45_24900 PF00753 Metallo-beta-lactamase superfamily NtRootC45_24900 PF12706 Beta-lactamase superfamily domain NtRootC45_24910 PF01177 Asp/Glu/Hydantoin racemase NtRootC45_24930 PF02617 ATP-dependent Clp protease adaptor protein ClpS NtRootC45_24940 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NtRootC45_24940 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NtRootC45_24950 PF00857 Isochorismatase family NtRootC45_24960 PF04851 Type III restriction enzyme, res subunit NtRootC45_24980 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NtRootC45_25000 PF00005 ABC transporter NtRootC45_25010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NtRootC45_25070 PF01939 Endonuclease NucS NtRootC45_25080 PF01979 Amidohydrolase family NtRootC45_25090 PF00313 'Cold-shock' DNA-binding domain NtRootC45_25100 PF09924 Uncharacterised conserved protein (DUF2156) NtRootC45_25110 PF00756 Putative esterase NtRootC45_25130 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NtRootC45_25140 PF02874 ATP synthase alpha/beta family, beta-barrel domain NtRootC45_25140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NtRootC45_25150 PF00231 ATP synthase NtRootC45_25160 PF02874 ATP synthase alpha/beta family, beta-barrel domain NtRootC45_25160 PF00306 ATP synthase alpha/beta chain, C terminal domain NtRootC45_25160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NtRootC45_25170 PF00213 ATP synthase delta (OSCP) subunit NtRootC45_25180 PF00430 ATP synthase B/B' CF(0) NtRootC45_25190 PF00137 ATP synthase subunit C NtRootC45_25200 PF00119 ATP synthase A chain NtRootC45_25240 PF00953 Glycosyl transferase family 4 NtRootC45_25270 PF01300 Telomere recombination NtRootC45_25280 PF17827 PrmC N-terminal domain NtRootC45_25280 PF13649 Methyltransferase domain NtRootC45_25290 PF00472 RF-1 domain NtRootC45_25290 PF03462 PCRF domain NtRootC45_25300 PF07497 Rho termination factor, RNA-binding domain NtRootC45_25300 PF07498 Rho termination factor, N-terminal domain NtRootC45_25300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NtRootC45_25310 PF00288 GHMP kinases N terminal domain NtRootC45_25310 PF08544 GHMP kinases C terminal NtRootC45_25320 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC45_25330 PF03447 Homoserine dehydrogenase, NAD binding domain NtRootC45_25330 PF00742 Homoserine dehydrogenase NtRootC45_25330 PF01842 ACT domain NtRootC45_25340 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NtRootC45_25340 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NtRootC45_25350 PF05746 DALR anticodon binding domain NtRootC45_25350 PF03485 Arginyl tRNA synthetase N terminal domain NtRootC45_25350 PF00750 tRNA synthetases class I (R) NtRootC45_25390 PF00970 Oxidoreductase FAD-binding domain NtRootC45_25390 PF00042 Globin NtRootC45_25390 PF00175 Oxidoreductase NAD-binding domain NtRootC45_25400 PF16485 Protealysin propeptide NtRootC45_25400 PF01447 Thermolysin metallopeptidase, catalytic domain NtRootC45_25400 PF02868 Thermolysin metallopeptidase, alpha-helical domain NtRootC45_25420 PF01965 DJ-1/PfpI family NtRootC45_25450 PF11898 Domain of unknown function (DUF3418) NtRootC45_25450 PF04408 Helicase associated domain (HA2) NtRootC45_25450 PF00271 Helicase conserved C-terminal domain NtRootC45_25450 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NtRootC45_25450 PF00270 DEAD/DEAH box helicase NtRootC45_25460 PF01230 HIT domain NtRootC45_25470 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_25470 PF00107 Zinc-binding dehydrogenase NtRootC45_25480 PF00581 Rhodanese-like domain NtRootC45_25520 PF01475 Ferric uptake regulator family NtRootC45_25530 PF00950 ABC 3 transport family NtRootC45_25540 PF00005 ABC transporter NtRootC45_25550 PF01297 Zinc-uptake complex component A periplasmic NtRootC45_25560 PF01595 Cyclin M transmembrane N-terminal domain NtRootC45_25560 PF00571 CBS domain NtRootC45_25570 PF01595 Cyclin M transmembrane N-terminal domain NtRootC45_25570 PF03471 Transporter associated domain NtRootC45_25570 PF00571 CBS domain NtRootC45_25580 PF00676 Dehydrogenase E1 component NtRootC45_25580 PF16078 2-oxoglutarate dehydrogenase N-terminus NtRootC45_25580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootC45_25580 PF16870 2-oxoglutarate dehydrogenase C-terminal NtRootC45_25580 PF02779 Transketolase, pyrimidine binding domain NtRootC45_25610 PF00144 Beta-lactamase NtRootC45_25650 PF08281 Sigma-70, region 4 NtRootC45_25650 PF04542 Sigma-70 region 2 NtRootC45_25670 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NtRootC45_25680 PF03193 RsgA GTPase NtRootC45_25690 PF00459 Inositol monophosphatase family NtRootC45_25700 PF00266 Aminotransferase class-V NtRootC45_25710 PF08241 Methyltransferase domain NtRootC45_25730 PF07690 Major Facilitator Superfamily NtRootC45_25750 PF13180 PDZ domain NtRootC45_25760 PF01668 SmpB protein NtRootC45_25770 PF01551 Peptidase family M23 NtRootC45_25780 PF18075 FtsX extracellular domain NtRootC45_25780 PF02687 FtsX-like permease family NtRootC45_25790 PF00005 ABC transporter NtRootC45_25800 PF00472 RF-1 domain NtRootC45_25800 PF03462 PCRF domain NtRootC45_25860 PF00437 Type II/IV secretion system protein NtRootC45_25870 PF01183 Glycosyl hydrolases family 25 NtRootC45_25920 PF00535 Glycosyl transferase family 2 NtRootC45_25950 PF00005 ABC transporter NtRootC45_25950 PF14524 Wzt C-terminal domain NtRootC45_25960 PF01061 ABC-2 type transporter NtRootC45_25970 PF17994 Galactofuranosyltransferase 2 N-terminal NtRootC45_25980 PF03275 UDP-galactopyranose mutase NtRootC45_26020 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NtRootC45_26030 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootC45_26050 PF12538 DNA transporter NtRootC45_26050 PF01580 FtsK/SpoIIIE family NtRootC45_26070 PF02467 Transcription factor WhiB NtRootC45_26080 PF12282 Signal transduction histidine kinase NtRootC45_26080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_26080 PF07568 Histidine kinase NtRootC45_26090 PF05088 Bacterial NAD-glutamate dehydrogenase NtRootC45_26160 PF07517 SecA DEAD-like domain NtRootC45_26160 PF07516 SecA Wing and Scaffold domain NtRootC45_26160 PF01043 SecA preprotein cross-linking domain NtRootC45_26170 PF06224 Winged helix DNA-binding domain NtRootC45_26180 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NtRootC45_26180 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NtRootC45_26210 PF10646 Sporulation and spore germination NtRootC45_26210 PF10647 Lipoprotein LpqB beta-propeller domain NtRootC45_26220 PF00672 HAMP domain NtRootC45_26220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_26220 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_26230 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_26230 PF00072 Response regulator receiver domain NtRootC45_26260 PF14258 Domain of unknown function (DUF4350) NtRootC45_26270 PF17863 AAA lid domain NtRootC45_26270 PF07726 ATPase family associated with various cellular activities (AAA) NtRootC45_26330 PF00005 ABC transporter NtRootC45_26330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC45_26340 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootC45_26340 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_26350 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_26400 PF00890 FAD binding domain NtRootC45_26410 PF00248 Aldo/keto reductase family NtRootC45_26430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NtRootC45_26430 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_26440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_26440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_26460 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NtRootC45_26460 PF08501 Shikimate dehydrogenase substrate binding domain NtRootC45_26470 PF00083 Sugar (and other) transporter NtRootC45_26470 PF07690 Major Facilitator Superfamily NtRootC45_26480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_26480 PF03466 LysR substrate binding domain NtRootC45_26490 PF00266 Aminotransferase class-V NtRootC45_26510 PF00781 Diacylglycerol kinase catalytic domain NtRootC45_26520 PF01556 DnaJ C terminal domain NtRootC45_26520 PF00226 DnaJ domain NtRootC45_26520 PF00684 DnaJ central domain NtRootC45_26530 PF00588 SpoU rRNA Methylase family NtRootC45_26540 PF04542 Sigma-70 region 2 NtRootC45_26540 PF04545 Sigma-70, region 4 NtRootC45_26550 PF10099 Anti-sigma-K factor rskA NtRootC45_26560 PF02447 GntP family permease NtRootC45_26580 PF02585 GlcNAc-PI de-N-acetylase NtRootC45_26590 PF01012 Electron transfer flavoprotein domain NtRootC45_26590 PF00766 Electron transfer flavoprotein FAD-binding domain NtRootC45_26600 PF01012 Electron transfer flavoprotein domain NtRootC45_26610 PF13180 PDZ domain NtRootC45_26630 PF04536 TPM domain NtRootC45_26640 PF04012 PspA/IM30 family NtRootC45_26650 PF07702 UTRA domain NtRootC45_26650 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_26660 PF03699 Uncharacterised protein family (UPF0182) NtRootC45_26670 PF13180 PDZ domain NtRootC45_26670 PF05362 Lon protease (S16) C-terminal proteolytic domain NtRootC45_26700 PF00570 HRDC domain NtRootC45_26700 PF00580 UvrD/REP helicase N-terminal domain NtRootC45_26700 PF13361 UvrD-like helicase C-terminal domain NtRootC45_26710 PF00293 NUDIX domain NtRootC45_26710 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NtRootC45_26710 PF09297 NADH pyrophosphatase zinc ribbon domain NtRootC45_26730 PF00580 UvrD/REP helicase N-terminal domain NtRootC45_26730 PF13361 UvrD-like helicase C-terminal domain NtRootC45_26770 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC45_26780 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_26790 PF00005 ABC transporter NtRootC45_26800 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootC45_26820 PF00202 Aminotransferase class-III NtRootC45_26830 PF00296 Luciferase-like monooxygenase NtRootC45_26840 PF00490 Delta-aminolevulinic acid dehydratase NtRootC45_26860 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NtRootC45_26860 PF03900 Porphobilinogen deaminase, C-terminal domain NtRootC45_26870 PF00762 Ferrochelatase NtRootC45_26880 PF06778 Chlorite dismutase NtRootC45_26890 PF01593 Flavin containing amine oxidoreductase NtRootC45_26900 PF01208 Uroporphyrinogen decarboxylase (URO-D) NtRootC45_26910 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NtRootC45_26910 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NtRootC45_26910 PF01488 Shikimate / quinate 5-dehydrogenase NtRootC45_26920 PF00106 short chain dehydrogenase NtRootC45_26930 PF00899 ThiF family NtRootC45_26930 PF00581 Rhodanese-like domain NtRootC45_26940 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_26970 PF01329 Pterin 4 alpha carbinolamine dehydratase NtRootC45_26980 PF05690 Thiazole biosynthesis protein ThiG NtRootC45_27000 PF01266 FAD dependent oxidoreductase NtRootC45_27000 PF05690 Thiazole biosynthesis protein ThiG NtRootC45_27010 PF02581 Thiamine monophosphate synthase NtRootC45_27030 PF00561 alpha/beta hydrolase fold NtRootC45_27040 PF00773 RNB domain NtRootC45_27040 PF00575 S1 RNA binding domain NtRootC45_27050 PF00270 DEAD/DEAH box helicase NtRootC45_27050 PF00271 Helicase conserved C-terminal domain NtRootC45_27060 PF01555 DNA methylase NtRootC45_27070 PF01914 MarC family integral membrane protein NtRootC45_27090 PF00557 Metallopeptidase family M24 NtRootC45_27090 PF05195 Aminopeptidase P, N-terminal domain NtRootC45_27110 PF00571 CBS domain NtRootC45_27110 PF01769 Divalent cation transporter NtRootC45_27110 PF03448 MgtE intracellular N domain NtRootC45_27130 PF01883 Iron-sulfur cluster assembly protein NtRootC45_27130 PF10609 NUBPL iron-transfer P-loop NTPase NtRootC45_27140 PF02416 mttA/Hcf106 family NtRootC45_27160 PF04542 Sigma-70 region 2 NtRootC45_27160 PF08281 Sigma-70, region 4 NtRootC45_27170 PF01596 O-methyltransferase NtRootC45_27210 PF03641 Possible lysine decarboxylase NtRootC45_27220 PF00005 ABC transporter NtRootC45_27240 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC45_27250 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_27260 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_27270 PF07687 Peptidase dimerisation domain NtRootC45_27270 PF01546 Peptidase family M20/M25/M40 NtRootC45_27280 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle NtRootC45_27280 PF14602 Hexapeptide repeat of succinyl-transferase NtRootC45_27310 PF13977 BetI-type transcriptional repressor, C-terminal NtRootC45_27310 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_27320 PF16363 GDP-mannose 4,6 dehydratase NtRootC45_27330 PF00285 Citrate synthase, C-terminal domain NtRootC45_27340 PF00155 Aminotransferase class I and II NtRootC45_27350 PF00037 4Fe-4S binding domain NtRootC45_27380 PF00009 Elongation factor Tu GTP binding domain NtRootC45_27380 PF03144 Elongation factor Tu domain 2 NtRootC45_27380 PF00679 Elongation factor G C-terminus NtRootC45_27380 PF14492 Elongation Factor G, domain II NtRootC45_27400 PF00005 ABC transporter NtRootC45_27400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC45_27410 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_27410 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootC45_27420 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_27430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootC45_27450 PF01926 50S ribosome-binding GTPase NtRootC45_27450 PF06071 Protein of unknown function (DUF933) NtRootC45_27460 PF02646 RmuC family NtRootC45_27470 PF02401 LytB protein NtRootC45_27490 PF02601 Exonuclease VII, large subunit NtRootC45_27490 PF13742 OB-fold nucleic acid binding domain NtRootC45_27500 PF02609 Exonuclease VII small subunit NtRootC45_27510 PF03976 Polyphosphate kinase 2 (PPK2) NtRootC45_27520 PF00155 Aminotransferase class I and II NtRootC45_27540 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_27550 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_27560 PF00571 CBS domain NtRootC45_27560 PF00005 ABC transporter NtRootC45_27570 PF03193 RsgA GTPase NtRootC45_27580 PF13344 Haloacid dehalogenase-like hydrolase NtRootC45_27580 PF00293 NUDIX domain NtRootC45_27590 PF01301 Glycosyl hydrolases family 35 NtRootC45_27610 PF02678 Pirin NtRootC45_27610 PF05726 Pirin C-terminal cupin domain NtRootC45_27620 PF01869 BadF/BadG/BcrA/BcrD ATPase family NtRootC45_27640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_27640 PF03466 LysR substrate binding domain NtRootC45_27650 PF07690 Major Facilitator Superfamily NtRootC45_27660 PF06736 Protein of unknown function (DUF1211) NtRootC45_27710 PF01544 CorA-like Mg2+ transporter protein NtRootC45_27730 PF00210 Ferritin-like domain NtRootC45_27740 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NtRootC45_27750 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NtRootC45_27770 PF03109 ABC1 family NtRootC45_27780 PF03551 Transcriptional regulator PadR-like family NtRootC45_27960 PF00072 Response regulator receiver domain NtRootC45_27960 PF03861 ANTAR domain NtRootC45_27980 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC45_27980 PF17862 AAA+ lid domain NtRootC45_27980 PF06480 FtsH Extracellular NtRootC45_27980 PF01434 Peptidase family M41 NtRootC45_28090 PF13302 Acetyltransferase (GNAT) domain NtRootC45_28100 PF00483 Nucleotidyl transferase NtRootC45_28110 PF01812 5-formyltetrahydrofolate cyclo-ligase family NtRootC45_28150 PF00117 Glutamine amidotransferase class-I NtRootC45_28150 PF02540 NAD synthase NtRootC45_28150 PF00958 GMP synthase C terminal domain NtRootC45_28190 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NtRootC45_28190 PF01266 FAD dependent oxidoreductase NtRootC45_28200 PF00478 IMP dehydrogenase / GMP reductase domain NtRootC45_28240 PF00664 ABC transporter transmembrane region NtRootC45_28240 PF00005 ABC transporter NtRootC45_28250 PF00571 CBS domain NtRootC45_28250 PF00478 IMP dehydrogenase / GMP reductase domain NtRootC45_28260 PF01757 Acyltransferase family NtRootC45_28270 PF01757 Acyltransferase family NtRootC45_28280 PF00118 TCP-1/cpn60 chaperonin family NtRootC45_28290 PF00166 Chaperonin 10 Kd subunit NtRootC45_28310 PF18096 THUMP domain-like NtRootC45_28320 PF08501 Shikimate dehydrogenase substrate binding domain NtRootC45_28330 PF00444 Ribosomal protein L36 NtRootC45_28350 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootC45_28360 PF00814 Glycoprotease family NtRootC45_28380 PF00814 Glycoprotease family NtRootC45_28390 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NtRootC45_28400 PF00842 Alanine racemase, C-terminal domain NtRootC45_28400 PF01168 Alanine racemase, N-terminal domain NtRootC45_28420 PF02056 Family 4 glycosyl hydrolase NtRootC45_28420 PF11975 Family 4 glycosyl hydrolase C-terminal domain NtRootC45_28440 PF13439 Glycosyltransferase Family 4 NtRootC45_28440 PF00534 Glycosyl transferases group 1 NtRootC45_28450 PF01268 Formate--tetrahydrofolate ligase NtRootC45_28460 PF01658 Myo-inositol-1-phosphate synthase NtRootC45_28470 PF00248 Aldo/keto reductase family NtRootC45_28480 PF11941 Domain of unknown function (DUF3459) NtRootC45_28480 PF00128 Alpha amylase, catalytic domain NtRootC45_28490 PF00128 Alpha amylase, catalytic domain NtRootC45_28500 PF00128 Alpha amylase, catalytic domain NtRootC45_28500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NtRootC45_28510 PF01256 Carbohydrate kinase NtRootC45_28510 PF03853 YjeF-related protein N-terminus NtRootC45_28520 PF01648 4'-phosphopantetheinyl transferase superfamily NtRootC45_28530 PF01380 SIS domain NtRootC45_28540 PF00485 Phosphoribulokinase / Uridine kinase family NtRootC45_28560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootC45_28560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootC45_28560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootC45_28560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootC45_28570 PF00380 Ribosomal protein S9/S16 NtRootC45_28580 PF00572 Ribosomal protein L13 NtRootC45_28620 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NtRootC45_28630 PF00437 Type II/IV secretion system protein NtRootC45_28680 PF13180 PDZ domain NtRootC45_28700 PF01416 tRNA pseudouridine synthase NtRootC45_28710 PF01196 Ribosomal protein L17 NtRootC45_28720 PF01000 RNA polymerase Rpb3/RpoA insert domain NtRootC45_28720 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NtRootC45_28720 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NtRootC45_28730 PF00411 Ribosomal protein S11 NtRootC45_28740 PF00416 Ribosomal protein S13/S18 NtRootC45_28750 PF01176 Translation initiation factor 1A / IF-1 NtRootC45_28760 PF03576 Peptidase family S58 NtRootC45_28770 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_28780 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_28800 PF00557 Metallopeptidase family M24 NtRootC45_28820 PF00501 AMP-binding enzyme NtRootC45_28820 PF13193 AMP-binding enzyme C-terminal domain NtRootC45_28830 PF00067 Cytochrome P450 NtRootC45_28840 PF00535 Glycosyl transferase family 2 NtRootC45_28850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootC45_28850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootC45_28870 PF00344 SecY translocase NtRootC45_28880 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NtRootC45_28890 PF00327 Ribosomal protein L30p/L7e NtRootC45_28900 PF00333 Ribosomal protein S5, N-terminal domain NtRootC45_28900 PF03719 Ribosomal protein S5, C-terminal domain NtRootC45_28910 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NtRootC45_28920 PF00347 Ribosomal protein L6 NtRootC45_28930 PF00410 Ribosomal protein S8 NtRootC45_28940 PF00281 Ribosomal protein L5 NtRootC45_28940 PF00673 ribosomal L5P family C-terminus NtRootC45_28950 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NtRootC45_28960 PF00238 Ribosomal protein L14p/L23e NtRootC45_28970 PF00366 Ribosomal protein S17 NtRootC45_28980 PF00831 Ribosomal L29 protein NtRootC45_28990 PF00252 Ribosomal protein L16p/L10e NtRootC45_29000 PF07650 KH domain NtRootC45_29000 PF00189 Ribosomal protein S3, C-terminal domain NtRootC45_29010 PF00237 Ribosomal protein L22p/L17e NtRootC45_29020 PF00203 Ribosomal protein S19 NtRootC45_29030 PF00181 Ribosomal Proteins L2, RNA binding domain NtRootC45_29030 PF03947 Ribosomal Proteins L2, C-terminal domain NtRootC45_29040 PF00276 Ribosomal protein L23 NtRootC45_29050 PF00573 Ribosomal protein L4/L1 family NtRootC45_29060 PF00297 Ribosomal protein L3 NtRootC45_29070 PF00338 Ribosomal protein S10p/S20e NtRootC45_29080 PF00232 Glycosyl hydrolase family 1 NtRootC45_29110 PF03143 Elongation factor Tu C-terminal domain NtRootC45_29110 PF00009 Elongation factor Tu GTP binding domain NtRootC45_29110 PF03144 Elongation factor Tu domain 2 NtRootC45_29120 PF03764 Elongation factor G, domain IV NtRootC45_29120 PF00679 Elongation factor G C-terminus NtRootC45_29120 PF03144 Elongation factor Tu domain 2 NtRootC45_29120 PF14492 Elongation Factor G, domain II NtRootC45_29120 PF00009 Elongation factor Tu GTP binding domain NtRootC45_29130 PF00177 Ribosomal protein S7p/S5e NtRootC45_29140 PF00164 Ribosomal protein S12/S23 NtRootC45_29150 PF00623 RNA polymerase Rpb1, domain 2 NtRootC45_29150 PF05000 RNA polymerase Rpb1, domain 4 NtRootC45_29150 PF04997 RNA polymerase Rpb1, domain 1 NtRootC45_29150 PF04998 RNA polymerase Rpb1, domain 5 NtRootC45_29150 PF04983 RNA polymerase Rpb1, domain 3 NtRootC45_29160 PF10385 RNA polymerase beta subunit external 1 domain NtRootC45_29160 PF04563 RNA polymerase beta subunit NtRootC45_29160 PF00562 RNA polymerase Rpb2, domain 6 NtRootC45_29160 PF04560 RNA polymerase Rpb2, domain 7 NtRootC45_29160 PF04565 RNA polymerase Rpb2, domain 3 NtRootC45_29160 PF04561 RNA polymerase Rpb2, domain 2 NtRootC45_29170 PF02803 Thiolase, C-terminal domain NtRootC45_29170 PF00108 Thiolase, N-terminal domain NtRootC45_29180 PF03129 Anticodon binding domain NtRootC45_29180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootC45_29180 PF04073 Aminoacyl-tRNA editing domain NtRootC45_29190 PF00542 Ribosomal protein L7/L12 C-terminal domain NtRootC45_29190 PF16320 Ribosomal protein L7/L12 dimerisation domain NtRootC45_29200 PF00466 Ribosomal protein L10 NtRootC45_29240 PF00687 Ribosomal protein L1p/L10e family NtRootC45_29250 PF00298 Ribosomal protein L11, RNA binding domain NtRootC45_29250 PF03946 Ribosomal protein L11, N-terminal domain NtRootC45_29260 PF02357 Transcription termination factor nusG NtRootC45_29270 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NtRootC45_29280 PF00155 Aminotransferase class I and II NtRootC45_29290 PF00072 Response regulator receiver domain NtRootC45_29290 PF00196 Bacterial regulatory proteins, luxR family NtRootC45_29360 PF00365 Phosphofructokinase NtRootC45_29380 PF07690 Major Facilitator Superfamily NtRootC45_29410 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC45_29410 PF01571 Aminomethyltransferase folate-binding domain NtRootC45_29420 PF01566 Natural resistance-associated macrophage protein NtRootC45_29420 PF03358 NADPH-dependent FMN reductase NtRootC45_29430 PF08768 Domain of unknown function (DUF1794) NtRootC45_29460 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_29470 PF00583 Acetyltransferase (GNAT) family NtRootC45_29480 PF02503 Polyphosphate kinase middle domain NtRootC45_29480 PF13090 Polyphosphate kinase C-terminal domain 2 NtRootC45_29480 PF17941 Polyphosphate kinase C-terminal domain 1 NtRootC45_29480 PF13089 Polyphosphate kinase N-terminal domain NtRootC45_29490 PF00293 NUDIX domain NtRootC45_29490 PF00300 Histidine phosphatase superfamily (branch 1) NtRootC45_29530 PF00303 Thymidylate synthase NtRootC45_29540 PF00186 Dihydrofolate reductase NtRootC45_29560 PF01118 Semialdehyde dehydrogenase, NAD binding domain NtRootC45_29560 PF02774 Semialdehyde dehydrogenase, dimerisation domain NtRootC45_29600 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NtRootC45_29600 PF01565 FAD binding domain NtRootC45_29610 PF07690 Major Facilitator Superfamily NtRootC45_29630 PF13452 N-terminal half of MaoC dehydratase NtRootC45_29680 PF00005 ABC transporter NtRootC45_29690 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_29700 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NtRootC45_29710 PF00248 Aldo/keto reductase family NtRootC45_29720 PF00128 Alpha amylase, catalytic domain NtRootC45_29730 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_29740 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_29760 PF00480 ROK family NtRootC45_29770 PF00999 Sodium/hydrogen exchanger family NtRootC45_29790 PF01476 LysM domain NtRootC45_29790 PF03734 L,D-transpeptidase catalytic domain NtRootC45_29800 PF00270 DEAD/DEAH box helicase NtRootC45_29800 PF00271 Helicase conserved C-terminal domain NtRootC45_29800 PF03880 DbpA RNA binding domain NtRootC45_29820 PF00072 Response regulator receiver domain NtRootC45_29820 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_29830 PF00582 Universal stress protein family NtRootC45_29830 PF13493 Domain of unknown function (DUF4118) NtRootC45_29830 PF02702 Osmosensitive K+ channel His kinase sensor domain NtRootC45_29830 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_29830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_29850 PF03738 Glutathionylspermidine synthase preATP-grasp NtRootC45_29860 PF13520 Amino acid permease NtRootC45_29870 PF09594 Glycosyltransferase family 87 NtRootC45_29880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC45_29880 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC45_29880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC45_29910 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_29920 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_29930 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NtRootC45_29930 PF02929 Beta galactosidase small chain NtRootC45_29930 PF02837 Glycosyl hydrolases family 2, sugar binding domain NtRootC45_29930 PF16353 Domain of unknown function(DUF4981) NtRootC45_29950 PF01638 HxlR-like helix-turn-helix NtRootC45_29960 PF05506 Domain of unknown function (DUF756) NtRootC45_29960 PF04185 Phosphoesterase family NtRootC45_29970 PF09594 Glycosyltransferase family 87 NtRootC45_29980 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootC45_29990 PF00571 CBS domain NtRootC45_29990 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC45_30030 PF00501 AMP-binding enzyme NtRootC45_30030 PF13193 AMP-binding enzyme C-terminal domain NtRootC45_30050 PF00085 Thioredoxin NtRootC45_30060 PF17933 Tetracyclin repressor-like, C-terminal domain NtRootC45_30060 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_30070 PF00005 ABC transporter NtRootC45_30070 PF13732 Domain of unknown function (DUF4162) NtRootC45_30110 PF07885 Ion channel NtRootC45_30130 PF04461 Protein of unknown function (DUF520) NtRootC45_30140 PF03239 Iron permease FTR1 family NtRootC45_30150 PF13473 Cupredoxin-like domain NtRootC45_30150 PF09375 Imelysin NtRootC45_30160 PF04261 Dyp-type peroxidase family NtRootC45_30160 PF10518 TAT (twin-arginine translocation) pathway signal sequence NtRootC45_30190 PF01435 Peptidase family M48 NtRootC45_30220 PF01475 Ferric uptake regulator family NtRootC45_30230 PF06628 Catalase-related immune-responsive NtRootC45_30230 PF00199 Catalase NtRootC45_30250 PF13520 Amino acid permease NtRootC45_30270 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_30270 PF00107 Zinc-binding dehydrogenase NtRootC45_30280 PF00171 Aldehyde dehydrogenase family NtRootC45_30300 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_30310 PF00892 EamA-like transporter family NtRootC45_30350 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_30360 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_30370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC45_30370 PF01842 ACT domain NtRootC45_30370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootC45_30380 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_30390 PF02278 Polysaccharide lyase family 8, super-sandwich domain NtRootC45_30390 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NtRootC45_30390 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NtRootC45_30400 PF02278 Polysaccharide lyase family 8, super-sandwich domain NtRootC45_30400 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NtRootC45_30400 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NtRootC45_30410 PF00202 Aminotransferase class-III NtRootC45_30420 PF00171 Aldehyde dehydrogenase family NtRootC45_30430 PF13556 PucR C-terminal helix-turn-helix domain NtRootC45_30430 PF17853 GGDEF-like domain NtRootC45_30430 PF05651 Putative sugar diacid recognition NtRootC45_30440 PF07690 Major Facilitator Superfamily NtRootC45_30450 PF07729 FCD domain NtRootC45_30450 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_30460 PF00753 Metallo-beta-lactamase superfamily NtRootC45_30460 PF00581 Rhodanese-like domain NtRootC45_30470 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_30480 PF10414 Sirohaem synthase dimerisation region NtRootC45_30480 PF14824 Sirohaem biosynthesis protein central NtRootC45_30480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NtRootC45_30490 PF04960 Glutaminase NtRootC45_30500 PF00296 Luciferase-like monooxygenase NtRootC45_30550 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_30560 PF00005 ABC transporter NtRootC45_30580 PF02574 Homocysteine S-methyltransferase NtRootC45_30590 PF00009 Elongation factor Tu GTP binding domain NtRootC45_30600 PF01507 Phosphoadenosine phosphosulfate reductase family NtRootC45_30610 PF01507 Phosphoadenosine phosphosulfate reductase family NtRootC45_30620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NtRootC45_30620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NtRootC45_30640 PF03458 UPF0126 domain NtRootC45_30670 PF00348 Polyprenyl synthetase NtRootC45_30680 PF01494 FAD binding domain NtRootC45_30690 PF01209 ubiE/COQ5 methyltransferase family NtRootC45_30700 PF00425 chorismate binding enzyme NtRootC45_30710 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC45_30720 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_30730 PF00005 ABC transporter NtRootC45_30750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC45_30770 PF18374 Enolase N-terminal domain-like NtRootC45_30770 PF13378 Enolase C-terminal domain-like NtRootC45_30810 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_30820 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootC45_30820 PF08244 Glycosyl hydrolases family 32 C terminal NtRootC45_30830 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_30840 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_30930 PF00082 Subtilase family NtRootC45_30930 PF04151 Bacterial pre-peptidase C-terminal domain NtRootC45_30990 PF02817 e3 binding domain NtRootC45_30990 PF00364 Biotin-requiring enzyme NtRootC45_30990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootC45_31000 PF02780 Transketolase, C-terminal domain NtRootC45_31000 PF02779 Transketolase, pyrimidine binding domain NtRootC45_31010 PF00676 Dehydrogenase E1 component NtRootC45_31040 PF02350 UDP-N-acetylglucosamine 2-epimerase NtRootC45_31060 PF00483 Nucleotidyl transferase NtRootC45_31070 PF16363 GDP-mannose 4,6 dehydratase NtRootC45_31080 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NtRootC45_31090 PF13614 AAA domain NtRootC45_31170 PF13439 Glycosyltransferase Family 4 NtRootC45_31170 PF00534 Glycosyl transferases group 1 NtRootC45_31190 PF02397 Bacterial sugar transferase NtRootC45_31270 PF00561 alpha/beta hydrolase fold NtRootC45_31290 PF02386 Cation transport protein NtRootC45_31300 PF03814 Potassium-transporting ATPase A subunit NtRootC45_31320 PF02669 K+-transporting ATPase, c chain NtRootC45_31330 PF13493 Domain of unknown function (DUF4118) NtRootC45_31330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_31330 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_31330 PF02702 Osmosensitive K+ channel His kinase sensor domain NtRootC45_31330 PF00582 Universal stress protein family NtRootC45_31340 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_31340 PF00072 Response regulator receiver domain NtRootC45_31380 PF01022 Bacterial regulatory protein, arsR family NtRootC45_31440 PF01047 MarR family NtRootC45_31450 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NtRootC45_31480 PF00743 Flavin-binding monooxygenase-like NtRootC45_31490 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_31490 PF00107 Zinc-binding dehydrogenase NtRootC45_31510 PF00248 Aldo/keto reductase family NtRootC45_31520 PF00248 Aldo/keto reductase family NtRootC45_31580 PF00378 Enoyl-CoA hydratase/isomerase NtRootC45_31590 PF00970 Oxidoreductase FAD-binding domain NtRootC45_31590 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootC45_31590 PF00175 Oxidoreductase NAD-binding domain NtRootC45_31600 PF01883 Iron-sulfur cluster assembly protein NtRootC45_31610 PF05138 Phenylacetic acid catabolic protein NtRootC45_31620 PF06243 Phenylacetic acid degradation B NtRootC45_31630 PF05138 Phenylacetic acid catabolic protein NtRootC45_31640 PF01451 Low molecular weight phosphotyrosine protein phosphatase NtRootC45_31650 PF05257 CHAP domain NtRootC45_31650 PF01476 LysM domain NtRootC45_31660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NtRootC45_31660 PF00072 Response regulator receiver domain NtRootC45_31660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_31660 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_31660 PF00672 HAMP domain NtRootC45_31660 PF01627 Hpt domain NtRootC45_31670 PF00990 Diguanylate cyclase, GGDEF domain NtRootC45_31700 PF13439 Glycosyltransferase Family 4 NtRootC45_31720 PF13439 Glycosyltransferase Family 4 NtRootC45_31720 PF00534 Glycosyl transferases group 1 NtRootC45_31730 PF00535 Glycosyl transferase family 2 NtRootC45_31740 PF00326 Prolyl oligopeptidase family NtRootC45_31740 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NtRootC45_31750 PF08241 Methyltransferase domain NtRootC45_31770 PF00672 HAMP domain NtRootC45_31770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_31770 PF18698 Histidine kinase sensor domain NtRootC45_31770 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_31770 PF00989 PAS fold NtRootC45_31800 PF00990 Diguanylate cyclase, GGDEF domain NtRootC45_31800 PF03707 Bacterial signalling protein N terminal repeat NtRootC45_31800 PF00563 EAL domain NtRootC45_31820 PF03061 Thioesterase superfamily NtRootC45_31830 PF00501 AMP-binding enzyme NtRootC45_31830 PF14535 AMP-binding enzyme C-terminal domain NtRootC45_31850 PF01575 MaoC like domain NtRootC45_31850 PF00171 Aldehyde dehydrogenase family NtRootC45_31860 PF13350 Tyrosine phosphatase family NtRootC45_31880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootC45_31880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootC45_31890 PF00378 Enoyl-CoA hydratase/isomerase NtRootC45_31900 PF02803 Thiolase, C-terminal domain NtRootC45_31900 PF00108 Thiolase, N-terminal domain NtRootC45_31920 PF01738 Dienelactone hydrolase family NtRootC45_31930 PF00324 Amino acid permease NtRootC45_31940 PF01566 Natural resistance-associated macrophage protein NtRootC45_31940 PF03358 NADPH-dependent FMN reductase NtRootC45_31950 PF02517 CPBP intramembrane metalloprotease NtRootC45_31970 PF00378 Enoyl-CoA hydratase/isomerase NtRootC45_31980 PF00501 AMP-binding enzyme NtRootC45_31980 PF13193 AMP-binding enzyme C-terminal domain NtRootC45_31990 PF01040 UbiA prenyltransferase family NtRootC45_32030 PF00350 Dynamin family NtRootC45_32040 PF00350 Dynamin family NtRootC45_32070 PF00012 Hsp70 protein NtRootC45_32080 PF01578 Cytochrome C assembly protein NtRootC45_32100 PF02683 Cytochrome C biogenesis protein transmembrane region NtRootC45_32110 PF00578 AhpC/TSA family NtRootC45_32120 PF00300 Histidine phosphatase superfamily (branch 1) NtRootC45_32140 PF04264 YceI-like domain NtRootC45_32180 PF02629 CoA binding domain NtRootC45_32180 PF06971 Putative DNA-binding protein N-terminus NtRootC45_32220 PF12728 Helix-turn-helix domain NtRootC45_32230 PF00793 DAHP synthetase I family NtRootC45_32240 PF05448 Acetyl xylan esterase (AXE1) NtRootC45_32260 PF07690 Major Facilitator Superfamily NtRootC45_32280 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_32290 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_32310 PF02449 Beta-galactosidase NtRootC45_32310 PF08533 Beta-galactosidase C-terminal domain NtRootC45_32310 PF08532 Beta-galactosidase trimerisation domain NtRootC45_32320 PF01547 Bacterial extracellular solute-binding protein NtRootC45_32330 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_32340 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_32360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_32380 PF00171 Aldehyde dehydrogenase family NtRootC45_32390 PF13378 Enolase C-terminal domain-like NtRootC45_32390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootC45_32400 PF00701 Dihydrodipicolinate synthetase family NtRootC45_32420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_32420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_32430 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_32440 PF07729 FCD domain NtRootC45_32440 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_32450 PF01070 FMN-dependent dehydrogenase NtRootC45_32460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NtRootC45_32460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NtRootC45_32470 PF01022 Bacterial regulatory protein, arsR family NtRootC45_32500 PF00850 Histone deacetylase domain NtRootC45_32510 PF02386 Cation transport protein NtRootC45_32520 PF02080 TrkA-C domain NtRootC45_32520 PF02254 TrkA-N domain NtRootC45_32530 PF03807 NADP oxidoreductase coenzyme F420-dependent NtRootC45_32530 PF14748 Pyrroline-5-carboxylate reductase dimerisation NtRootC45_32540 PF01261 Xylose isomerase-like TIM barrel NtRootC45_32550 PF02541 Ppx/GppA phosphatase family NtRootC45_32570 PF01131 DNA topoisomerase NtRootC45_32570 PF01751 Toprim domain NtRootC45_32570 PF13368 Topoisomerase C-terminal repeat NtRootC45_32620 PF00581 Rhodanese-like domain NtRootC45_32620 PF17773 UPF0176 acylphosphatase like domain NtRootC45_32620 PF12368 Rhodanase C-terminal NtRootC45_32640 PF00271 Helicase conserved C-terminal domain NtRootC45_32640 PF09369 Domain of unknown function (DUF1998) NtRootC45_32640 PF00270 DEAD/DEAH box helicase NtRootC45_32700 PF00437 Type II/IV secretion system protein NtRootC45_32720 PF01612 3'-5' exonuclease NtRootC45_32720 PF00476 DNA polymerase family A NtRootC45_32720 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NtRootC45_32720 PF01367 5'-3' exonuclease, C-terminal SAM fold NtRootC45_32740 PF00293 NUDIX domain NtRootC45_32750 PF10576 Iron-sulfur binding domain of endonuclease III NtRootC45_32750 PF00633 Helix-hairpin-helix motif NtRootC45_32750 PF00730 HhH-GPD superfamily base excision DNA repair protein NtRootC45_32780 PF16177 Acetyl-coenzyme A synthetase N-terminus NtRootC45_32780 PF00501 AMP-binding enzyme NtRootC45_32780 PF13193 AMP-binding enzyme C-terminal domain NtRootC45_32790 PF08220 DeoR-like helix-turn-helix domain NtRootC45_32790 PF00455 DeoR C terminal sensor domain NtRootC45_32800 PF12704 MacB-like periplasmic core domain NtRootC45_32800 PF02687 FtsX-like permease family NtRootC45_32800 PF00005 ABC transporter NtRootC45_32820 PF00665 Integrase core domain NtRootC45_32820 PF13936 Helix-turn-helix domain NtRootC45_32830 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_32850 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_32860 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_32880 PF16874 Glycosyl hydrolase family 36 C-terminal domain NtRootC45_32880 PF16875 Glycosyl hydrolase family 36 N-terminal domain NtRootC45_32890 PF01220 Dehydroquinase class II NtRootC45_32900 PF02674 Colicin V production protein NtRootC45_32910 PF00027 Cyclic nucleotide-binding domain NtRootC45_32910 PF13545 Crp-like helix-turn-helix domain NtRootC45_32950 PF00912 Transglycosylase NtRootC45_32950 PF00905 Penicillin binding protein transpeptidase domain NtRootC45_32960 PF00149 Calcineurin-like phosphoesterase NtRootC45_32970 PF00664 ABC transporter transmembrane region NtRootC45_32970 PF00005 ABC transporter NtRootC45_32980 PF00005 ABC transporter NtRootC45_32980 PF00664 ABC transporter transmembrane region NtRootC45_33020 PF01259 SAICAR synthetase NtRootC45_33030 PF02844 Phosphoribosylglycinamide synthetase, N domain NtRootC45_33030 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NtRootC45_33030 PF02843 Phosphoribosylglycinamide synthetase, C domain NtRootC45_33070 PF00375 Sodium:dicarboxylate symporter family NtRootC45_33100 PF01177 Asp/Glu/Hydantoin racemase NtRootC45_33110 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NtRootC45_33120 PF17831 Pyruvate dehydrogenase E1 component middle domain NtRootC45_33120 PF00456 Transketolase, thiamine diphosphate binding domain NtRootC45_33140 PF12804 MobA-like NTP transferase domain NtRootC45_33150 PF00583 Acetyltransferase (GNAT) family NtRootC45_33160 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NtRootC45_33160 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NtRootC45_33180 PF13478 XdhC Rossmann domain NtRootC45_33180 PF02625 XdhC and CoxI family NtRootC45_33190 PF00860 Permease family NtRootC45_33200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootC45_33210 PF01979 Amidohydrolase family NtRootC45_33260 PF01014 Uricase NtRootC45_33270 PF00860 Permease family NtRootC45_33280 PF01614 Bacterial transcriptional regulator NtRootC45_33280 PF09339 IclR helix-turn-helix domain NtRootC45_33290 PF00390 Malic enzyme, N-terminal domain NtRootC45_33290 PF03949 Malic enzyme, NAD binding domain NtRootC45_33300 PF01274 Malate synthase NtRootC45_33320 PF07883 Cupin domain NtRootC45_33320 PF05899 Protein of unknown function (DUF861) NtRootC45_33350 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_33370 PF01547 Bacterial extracellular solute-binding protein NtRootC45_33380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_33380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_33390 PF00884 Sulfatase NtRootC45_33400 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_33410 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NtRootC45_33410 PF02278 Polysaccharide lyase family 8, super-sandwich domain NtRootC45_33410 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NtRootC45_33420 PF02661 Fic/DOC family NtRootC45_33440 PF04978 Protein of unknown function (DUF664) NtRootC45_33500 PF07690 Major Facilitator Superfamily NtRootC45_33530 PF00912 Transglycosylase NtRootC45_33530 PF00905 Penicillin binding protein transpeptidase domain NtRootC45_33550 PF07690 Major Facilitator Superfamily NtRootC45_33560 PF00909 Ammonium Transporter Family NtRootC45_33580 PF00916 Sulfate permease family NtRootC45_33580 PF01740 STAS domain NtRootC45_33620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_33620 PF03466 LysR substrate binding domain NtRootC45_33640 PF08267 Cobalamin-independent synthase, N-terminal domain NtRootC45_33640 PF01717 Cobalamin-independent synthase, Catalytic domain NtRootC45_33680 PF07690 Major Facilitator Superfamily NtRootC45_33700 PF01979 Amidohydrolase family NtRootC45_33710 PF03364 Polyketide cyclase / dehydrase and lipid transport NtRootC45_33720 PF01839 FG-GAP repeat NtRootC45_33720 PF18370 Rhamnogalacturonan I lyases beta-sheet domain NtRootC45_33730 PF00296 Luciferase-like monooxygenase NtRootC45_33750 PF07690 Major Facilitator Superfamily NtRootC45_33770 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_33780 PF00005 ABC transporter NtRootC45_33780 PF09383 NIL domain NtRootC45_33790 PF03180 NLPA lipoprotein NtRootC45_33800 PF00296 Luciferase-like monooxygenase NtRootC45_33890 PF12146 Serine aminopeptidase, S33 NtRootC45_33930 PF00005 ABC transporter NtRootC45_33930 PF00664 ABC transporter transmembrane region NtRootC45_33940 PF00664 ABC transporter transmembrane region NtRootC45_33940 PF00005 ABC transporter NtRootC45_33950 PF02525 Flavodoxin-like fold NtRootC45_33960 PF01638 HxlR-like helix-turn-helix NtRootC45_33970 PF05235 CHAD domain NtRootC45_33970 PF01928 CYTH domain NtRootC45_33980 PF03364 Polyketide cyclase / dehydrase and lipid transport NtRootC45_34050 PF02223 Thymidylate kinase NtRootC45_34080 PF13344 Haloacid dehalogenase-like hydrolase NtRootC45_34080 PF00293 NUDIX domain NtRootC45_34250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_34250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_34270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_34270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_34280 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_34290 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_34300 PF01547 Bacterial extracellular solute-binding protein NtRootC45_34310 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_34320 PF10137 Predicted nucleotide-binding protein containing TIR-like domain NtRootC45_34380 PF01261 Xylose isomerase-like TIM barrel NtRootC45_34390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootC45_34390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC45_34400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC45_34400 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC45_34400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC45_34410 PF02595 Glycerate kinase family NtRootC45_34420 PF01979 Amidohydrolase family NtRootC45_34430 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_34430 PF00072 Response regulator receiver domain NtRootC45_34440 PF00578 AhpC/TSA family NtRootC45_34460 PF00486 Transcriptional regulatory protein, C terminal NtRootC45_34460 PF00072 Response regulator receiver domain NtRootC45_34470 PF00535 Glycosyl transferase family 2 NtRootC45_34470 PF07238 PilZ domain NtRootC45_34470 PF03552 Cellulose synthase NtRootC45_34480 PF01740 STAS domain NtRootC45_34500 PF00266 Aminotransferase class-V NtRootC45_34540 PF07690 Major Facilitator Superfamily NtRootC45_34550 PF01638 HxlR-like helix-turn-helix NtRootC45_34560 PF01569 PAP2 superfamily NtRootC45_34580 PF00576 HIUase/Transthyretin family NtRootC45_34590 PF13936 Helix-turn-helix domain NtRootC45_34590 PF00665 Integrase core domain NtRootC45_34610 PF00156 Phosphoribosyl transferase domain NtRootC45_34620 PF00586 AIR synthase related protein, N-terminal domain NtRootC45_34620 PF02769 AIR synthase related protein, C-terminal domain NtRootC45_34660 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootC45_34660 PF17871 AAA lid domain NtRootC45_34660 PF02861 Clp amino terminal domain, pathogenicity island component NtRootC45_34660 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC45_34660 PF07724 AAA domain (Cdc48 subfamily) NtRootC45_34680 PF00005 ABC transporter NtRootC45_34680 PF03459 TOBE domain NtRootC45_34690 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_34710 PF03459 TOBE domain NtRootC45_34720 PF07730 Histidine kinase NtRootC45_34730 PF00196 Bacterial regulatory proteins, luxR family NtRootC45_34730 PF00072 Response regulator receiver domain NtRootC45_34750 PF08031 Berberine and berberine like NtRootC45_34750 PF01565 FAD binding domain NtRootC45_34790 PF03733 Inner membrane component domain NtRootC45_34800 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NtRootC45_34810 PF05962 HutD NtRootC45_34820 PF00893 Small Multidrug Resistance protein NtRootC45_34830 PF00893 Small Multidrug Resistance protein NtRootC45_34840 PF00248 Aldo/keto reductase family NtRootC45_34850 PF00753 Metallo-beta-lactamase superfamily NtRootC45_34860 PF00270 DEAD/DEAH box helicase NtRootC45_34860 PF00271 Helicase conserved C-terminal domain NtRootC45_34870 PF07690 Major Facilitator Superfamily NtRootC45_34880 PF00376 MerR family regulatory protein NtRootC45_34880 PF09278 MerR, DNA binding NtRootC45_34890 PF05175 Methyltransferase small domain NtRootC45_34890 PF08468 Methyltransferase small domain N-terminal NtRootC45_34910 PF07687 Peptidase dimerisation domain NtRootC45_34910 PF01546 Peptidase family M20/M25/M40 NtRootC45_34920 PF00083 Sugar (and other) transporter NtRootC45_34930 PF07690 Major Facilitator Superfamily NtRootC45_34960 PF02390 Putative methyltransferase NtRootC45_35000 PF04542 Sigma-70 region 2 NtRootC45_35000 PF04545 Sigma-70, region 4 NtRootC45_35040 PF00271 Helicase conserved C-terminal domain NtRootC45_35040 PF00176 SNF2 family N-terminal domain NtRootC45_35040 PF04434 SWIM zinc finger NtRootC45_35070 PF07702 UTRA domain NtRootC45_35070 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_35140 PF00171 Aldehyde dehydrogenase family NtRootC45_35150 PF00175 Oxidoreductase NAD-binding domain NtRootC45_35150 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootC45_35170 PF12697 Alpha/beta hydrolase family NtRootC45_35190 PF00106 short chain dehydrogenase NtRootC45_35200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC45_35200 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC45_35200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC45_35230 PF00355 Rieske [2Fe-2S] domain NtRootC45_35250 PF01047 MarR family NtRootC45_35260 PF03447 Homoserine dehydrogenase, NAD binding domain NtRootC45_35260 PF01958 Domain of unknown function DUF108 NtRootC45_35270 PF13411 MerR HTH family regulatory protein NtRootC45_35280 PF00684 DnaJ central domain NtRootC45_35280 PF00226 DnaJ domain NtRootC45_35280 PF01556 DnaJ C terminal domain NtRootC45_35290 PF01025 GrpE NtRootC45_35300 PF00012 Hsp70 protein NtRootC45_35310 PF05675 Protein of unknown function (DUF817) NtRootC45_35330 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_35330 PF13305 Tetracyclin repressor-like, C-terminal domain NtRootC45_35360 PF02311 AraC-like ligand binding domain NtRootC45_35360 PF12833 Helix-turn-helix domain NtRootC45_35390 PF09423 PhoD-like phosphatase NtRootC45_35390 PF16655 PhoD-like phosphatase, N-terminal domain NtRootC45_35400 PF00732 GMC oxidoreductase NtRootC45_35400 PF05199 GMC oxidoreductase NtRootC45_35410 PF14525 AraC-binding-like domain NtRootC45_35430 PF00155 Aminotransferase class I and II NtRootC45_35440 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC45_35440 PF00107 Zinc-binding dehydrogenase NtRootC45_35470 PF13520 Amino acid permease NtRootC45_35490 PF02728 Copper amine oxidase, N3 domain NtRootC45_35490 PF01179 Copper amine oxidase, enzyme domain NtRootC45_35500 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_35500 PF13977 BetI-type transcriptional repressor, C-terminal NtRootC45_35510 PF01810 LysE type translocator NtRootC45_35520 PF00171 Aldehyde dehydrogenase family NtRootC45_35540 PF00800 Prephenate dehydratase NtRootC45_35540 PF01817 Chorismate mutase type II NtRootC45_35540 PF01842 ACT domain NtRootC45_35560 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_35570 PF01451 Low molecular weight phosphotyrosine protein phosphatase NtRootC45_35580 PF01758 Sodium Bile acid symporter family NtRootC45_35590 PF01022 Bacterial regulatory protein, arsR family NtRootC45_35610 PF03176 MMPL family NtRootC45_35630 PF08241 Methyltransferase domain NtRootC45_35640 PF03795 YCII-related domain NtRootC45_35660 PF04542 Sigma-70 region 2 NtRootC45_35660 PF08281 Sigma-70, region 4 NtRootC45_35670 PF00248 Aldo/keto reductase family NtRootC45_35690 PF11799 impB/mucB/samB family C-terminal domain NtRootC45_35690 PF00817 impB/mucB/samB family NtRootC45_35700 PF01810 LysE type translocator NtRootC45_35720 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_35730 PF01156 Inosine-uridine preferring nucleoside hydrolase NtRootC45_35740 PF07690 Major Facilitator Superfamily NtRootC45_35750 PF00294 pfkB family carbohydrate kinase NtRootC45_35780 PF01451 Low molecular weight phosphotyrosine protein phosphatase NtRootC45_35790 PF00425 chorismate binding enzyme NtRootC45_35790 PF00117 Glutamine amidotransferase class-I NtRootC45_35790 PF04715 Anthranilate synthase component I, N terminal region NtRootC45_35800 PF13091 PLD-like domain NtRootC45_35800 PF13396 Phospholipase_D-nuclease N-terminal NtRootC45_35820 PF00324 Amino acid permease NtRootC45_35830 PF02627 Carboxymuconolactone decarboxylase family NtRootC45_35840 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC45_35840 PF00571 CBS domain NtRootC45_35850 PF00221 Aromatic amino acid lyase NtRootC45_35860 PF00296 Luciferase-like monooxygenase NtRootC45_35890 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootC45_35910 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootC45_35930 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NtRootC45_35940 PF00664 ABC transporter transmembrane region NtRootC45_35940 PF04954 Siderophore-interacting protein NtRootC45_35940 PF08021 Siderophore-interacting FAD-binding domain NtRootC45_35940 PF00005 ABC transporter NtRootC45_35950 PF01804 Penicillin amidase NtRootC45_35980 PF00005 ABC transporter NtRootC45_35990 PF09819 ABC-type cobalt transport system, permease component NtRootC45_36020 PF03334 Na+/H+ antiporter subunit NtRootC45_36030 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NtRootC45_36050 PF00361 Proton-conducting membrane transporter NtRootC45_36060 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NtRootC45_36070 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NtRootC45_36070 PF00361 Proton-conducting membrane transporter NtRootC45_36070 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NtRootC45_36070 PF13244 Domain of unknown function (DUF4040) NtRootC45_36100 PF00999 Sodium/hydrogen exchanger family NtRootC45_36120 PF00692 dUTPase NtRootC45_36150 PF02557 D-alanyl-D-alanine carboxypeptidase NtRootC45_36160 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NtRootC45_36160 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NtRootC45_36170 PF05977 Transmembrane secretion effector NtRootC45_36180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_36180 PF03466 LysR substrate binding domain NtRootC45_36190 PF16363 GDP-mannose 4,6 dehydratase NtRootC45_36200 PF01022 Bacterial regulatory protein, arsR family NtRootC45_36230 PF01261 Xylose isomerase-like TIM barrel NtRootC45_36240 PF13472 GDSL-like Lipase/Acylhydrolase family NtRootC45_36240 PF07859 alpha/beta hydrolase fold NtRootC45_36250 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_36260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_36260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_36300 PF03631 Virulence factor BrkB NtRootC45_36310 PF00480 ROK family NtRootC45_36320 PF01261 Xylose isomerase-like TIM barrel NtRootC45_36330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootC45_36330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootC45_36340 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_36350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootC45_36350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootC45_36360 PF00596 Class II Aldolase and Adducin N-terminal domain NtRootC45_36370 PF11762 L-arabinose isomerase C-terminal domain NtRootC45_36370 PF02610 L-arabinose isomerase NtRootC45_36380 PF01263 Aldose 1-epimerase NtRootC45_36390 PF00135 Carboxylesterase family NtRootC45_36410 PF01047 MarR family NtRootC45_36410 PF00480 ROK family NtRootC45_36430 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_36440 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_36450 PF00005 ABC transporter NtRootC45_36470 PF01042 Endoribonuclease L-PSP NtRootC45_36500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_36500 PF03466 LysR substrate binding domain NtRootC45_36530 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_36540 PF05336 L-rhamnose mutarotase NtRootC45_36560 PF00596 Class II Aldolase and Adducin N-terminal domain NtRootC45_36570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootC45_36570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootC45_36580 PF02261 Aspartate decarboxylase NtRootC45_36600 PF00723 Glycosyl hydrolases family 15 NtRootC45_36610 PF00296 Luciferase-like monooxygenase NtRootC45_36620 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC45_36630 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC45_36630 PF13291 ACT domain NtRootC45_36670 PF00296 Luciferase-like monooxygenase NtRootC45_36680 PF00296 Luciferase-like monooxygenase NtRootC45_36700 PF00296 Luciferase-like monooxygenase NtRootC45_36720 PF00005 ABC transporter NtRootC45_36730 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_36760 PF05872 Bacterial protein of unknown function (DUF853) NtRootC45_36780 PF02683 Cytochrome C biogenesis protein transmembrane region NtRootC45_36780 PF17991 Thioredoxin like C-terminal domain NtRootC45_36780 PF00578 AhpC/TSA family NtRootC45_36790 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) NtRootC45_36790 PF05425 Copper resistance protein D NtRootC45_36800 PF00216 Bacterial DNA-binding protein NtRootC45_36830 PF04542 Sigma-70 region 2 NtRootC45_36830 PF08281 Sigma-70, region 4 NtRootC45_36830 PF12680 SnoaL-like domain NtRootC45_36850 PF00253 Ribosomal protein S14p/S29e NtRootC45_36860 PF00471 Ribosomal protein L33 NtRootC45_36870 PF00830 Ribosomal L28 family NtRootC45_36880 PF00175 Oxidoreductase NAD-binding domain NtRootC45_36880 PF00042 Globin NtRootC45_36880 PF00970 Oxidoreductase FAD-binding domain NtRootC45_36960 PF08021 Siderophore-interacting FAD-binding domain NtRootC45_36960 PF04954 Siderophore-interacting protein NtRootC45_36970 PF00005 ABC transporter NtRootC45_36980 PF01032 FecCD transport family NtRootC45_36990 PF01032 FecCD transport family NtRootC45_37060 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC45_37060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC45_37060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC45_37090 PF01613 Flavin reductase like domain NtRootC45_37100 PF00248 Aldo/keto reductase family NtRootC45_37180 PF07729 FCD domain NtRootC45_37180 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_37200 PF10415 Fumarase C C-terminus NtRootC45_37200 PF00206 Lyase NtRootC45_37210 PF00324 Amino acid permease NtRootC45_37220 PF07729 FCD domain NtRootC45_37220 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_37240 PF00248 Aldo/keto reductase family NtRootC45_37250 PF05336 L-rhamnose mutarotase NtRootC45_37270 PF13378 Enolase C-terminal domain-like NtRootC45_37270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootC45_37280 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC45_37310 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC45_37310 PF17862 AAA+ lid domain NtRootC45_37310 PF01434 Peptidase family M41 NtRootC45_37310 PF06480 FtsH Extracellular NtRootC45_37330 PF13291 ACT domain NtRootC45_37330 PF04607 Region found in RelA / SpoT proteins NtRootC45_37330 PF02824 TGS domain NtRootC45_37340 PF00106 short chain dehydrogenase NtRootC45_37350 PF02909 Tetracyclin repressor-like, C-terminal domain NtRootC45_37350 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_37360 PF00144 Beta-lactamase NtRootC45_37370 PF00749 tRNA synthetases class I (E and Q), catalytic domain NtRootC45_37410 PF01037 Lrp/AsnC ligand binding domain NtRootC45_37420 PF01810 LysE type translocator NtRootC45_37440 PF01022 Bacterial regulatory protein, arsR family NtRootC45_37480 PF13936 Helix-turn-helix domain NtRootC45_37480 PF00665 Integrase core domain NtRootC45_37490 PF00295 Glycosyl hydrolases family 28 NtRootC45_37500 PF13936 Helix-turn-helix domain NtRootC45_37500 PF00665 Integrase core domain NtRootC45_37510 PF09339 IclR helix-turn-helix domain NtRootC45_37510 PF01614 Bacterial transcriptional regulator NtRootC45_37520 PF01321 Creatinase/Prolidase N-terminal domain NtRootC45_37520 PF00557 Metallopeptidase family M24 NtRootC45_37530 PF08946 Osmosensory transporter coiled coil NtRootC45_37530 PF00083 Sugar (and other) transporter NtRootC45_37540 PF07729 FCD domain NtRootC45_37540 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_37550 PF00464 Serine hydroxymethyltransferase NtRootC45_37560 PF01266 FAD dependent oxidoreductase NtRootC45_37570 PF04267 Sarcosine oxidase, delta subunit family NtRootC45_37580 PF17806 Sarcosine oxidase A3 domain NtRootC45_37580 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_37580 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC45_37580 PF01571 Aminomethyltransferase folate-binding domain NtRootC45_37590 PF04268 Sarcosine oxidase, gamma subunit family NtRootC45_37600 PF03313 Serine dehydratase alpha chain NtRootC45_37600 PF03315 Serine dehydratase beta chain NtRootC45_37610 PF00551 Formyl transferase NtRootC45_37640 PF01522 Polysaccharide deacetylase NtRootC45_37650 PF13936 Helix-turn-helix domain NtRootC45_37650 PF00665 Integrase core domain NtRootC45_37670 PF00390 Malic enzyme, N-terminal domain NtRootC45_37670 PF03949 Malic enzyme, NAD binding domain NtRootC45_37680 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_37680 PF17925 Tetracyclin repressor-like, C-terminal domain NtRootC45_37730 PF03737 Aldolase/RraA NtRootC45_37740 PF07690 Major Facilitator Superfamily NtRootC45_37750 PF00083 Sugar (and other) transporter NtRootC45_37760 PF07690 Major Facilitator Superfamily NtRootC45_37770 PF01047 MarR family NtRootC45_37810 PF00005 ABC transporter NtRootC45_37810 PF13732 Domain of unknown function (DUF4162) NtRootC45_37830 PF00324 Amino acid permease NtRootC45_37840 PF01232 Mannitol dehydrogenase Rossmann domain NtRootC45_37840 PF08125 Mannitol dehydrogenase C-terminal domain NtRootC45_37850 PF02378 Phosphotransferase system, EIIC NtRootC45_37850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NtRootC45_37850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NtRootC45_37870 PF00391 PEP-utilising enzyme, mobile domain NtRootC45_37870 PF02896 PEP-utilising enzyme, TIM barrel domain NtRootC45_37870 PF05524 PEP-utilising enzyme, N-terminal NtRootC45_37910 PF00561 alpha/beta hydrolase fold NtRootC45_37930 PF04679 ATP dependent DNA ligase C terminal region NtRootC45_37930 PF01068 ATP dependent DNA ligase domain NtRootC45_37970 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NtRootC45_37970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NtRootC45_38010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_38010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_38030 PF00005 ABC transporter NtRootC45_38030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC45_38040 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_38040 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootC45_38050 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_38060 PF00440 Bacterial regulatory proteins, tetR family NtRootC45_38060 PF17925 Tetracyclin repressor-like, C-terminal domain NtRootC45_38070 PF03358 NADPH-dependent FMN reductase NtRootC45_38120 PF00155 Aminotransferase class I and II NtRootC45_38160 PF02817 e3 binding domain NtRootC45_38160 PF00364 Biotin-requiring enzyme NtRootC45_38160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootC45_38170 PF02780 Transketolase, C-terminal domain NtRootC45_38170 PF02779 Transketolase, pyrimidine binding domain NtRootC45_38180 PF00676 Dehydrogenase E1 component NtRootC45_38190 PF00155 Aminotransferase class I and II NtRootC45_38200 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NtRootC45_38230 PF00206 Lyase NtRootC45_38230 PF08328 Adenylosuccinate lyase C-terminal NtRootC45_38260 PF03061 Thioesterase superfamily NtRootC45_38270 PF00106 short chain dehydrogenase NtRootC45_38280 PF08946 Osmosensory transporter coiled coil NtRootC45_38280 PF00083 Sugar (and other) transporter NtRootC45_38290 PF02626 Carboxyltransferase domain, subdomain A and B NtRootC45_38300 PF02682 Carboxyltransferase domain, subdomain C and D NtRootC45_38310 PF03746 LamB/YcsF family NtRootC45_38320 PF03466 LysR substrate binding domain NtRootC45_38320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_38340 PF03737 Aldolase/RraA NtRootC45_38350 PF00155 Aminotransferase class I and II NtRootC45_38390 PF03328 HpcH/HpaI aldolase/citrate lyase family NtRootC45_38400 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC45_38410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootC45_38420 PF00171 Aldehyde dehydrogenase family NtRootC45_38430 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_38430 PF07729 FCD domain NtRootC45_38440 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC45_38470 PF04226 Transglycosylase associated protein NtRootC45_38500 PF12833 Helix-turn-helix domain NtRootC45_38500 PF06445 GyrI-like small molecule binding domain NtRootC45_38540 PF06724 Domain of Unknown Function (DUF1206) NtRootC45_38570 PF03780 Asp23 family, cell envelope-related function NtRootC45_38630 PF04542 Sigma-70 region 2 NtRootC45_38630 PF08281 Sigma-70, region 4 NtRootC45_38670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_38670 PF00512 His Kinase A (phospho-acceptor) domain NtRootC45_38680 PF00069 Protein kinase domain NtRootC45_38680 PF03793 PASTA domain NtRootC45_38690 PF00300 Histidine phosphatase superfamily (branch 1) NtRootC45_38720 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NtRootC45_38730 PF00723 Glycosyl hydrolases family 15 NtRootC45_38750 PF00282 Pyridoxal-dependent decarboxylase conserved domain NtRootC45_38770 PF13419 Haloacid dehalogenase-like hydrolase NtRootC45_38800 PF01494 FAD binding domain NtRootC45_38810 PF01614 Bacterial transcriptional regulator NtRootC45_38810 PF09339 IclR helix-turn-helix domain NtRootC45_38820 PF07690 Major Facilitator Superfamily NtRootC45_38880 PF04226 Transglycosylase associated protein NtRootC45_38890 PF00069 Protein kinase domain NtRootC45_38890 PF03793 PASTA domain NtRootC45_38910 PF01047 MarR family NtRootC45_38970 PF04055 Radical SAM superfamily NtRootC45_38970 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NtRootC45_38980 PF03313 Serine dehydratase alpha chain NtRootC45_38980 PF03315 Serine dehydratase beta chain NtRootC45_38990 PF00464 Serine hydroxymethyltransferase NtRootC45_39000 PF01597 Glycine cleavage H-protein NtRootC45_39010 PF01571 Aminomethyltransferase folate-binding domain NtRootC45_39010 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC45_39020 PF02347 Glycine cleavage system P-protein NtRootC45_39030 PF13556 PucR C-terminal helix-turn-helix domain NtRootC45_39040 PF00083 Sugar (and other) transporter NtRootC45_39050 PF00491 Arginase family NtRootC45_39060 PF01741 Large-conductance mechanosensitive channel, MscL NtRootC45_39110 PF02233 NAD(P) transhydrogenase beta subunit NtRootC45_39120 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NtRootC45_39130 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NtRootC45_39130 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NtRootC45_39140 PF03358 NADPH-dependent FMN reductase NtRootC45_39370 PF13419 Haloacid dehalogenase-like hydrolase NtRootC45_39390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootC45_39390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC45_39440 PF13936 Helix-turn-helix domain NtRootC45_39440 PF00665 Integrase core domain NtRootC45_39450 PF07690 Major Facilitator Superfamily NtRootC45_39460 PF01494 FAD binding domain NtRootC45_39470 PF00501 AMP-binding enzyme NtRootC45_39470 PF13193 AMP-binding enzyme C-terminal domain NtRootC45_39500 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC45_39510 PF01042 Endoribonuclease L-PSP NtRootC45_39530 PF01614 Bacterial transcriptional regulator NtRootC45_39530 PF09339 IclR helix-turn-helix domain NtRootC45_39540 PF01144 Coenzyme A transferase NtRootC45_39550 PF01144 Coenzyme A transferase NtRootC45_39560 PF00108 Thiolase, N-terminal domain NtRootC45_39560 PF02803 Thiolase, C-terminal domain NtRootC45_39570 PF02627 Carboxymuconolactone decarboxylase family NtRootC45_39580 PF00561 alpha/beta hydrolase fold NtRootC45_39580 PF08386 TAP-like protein NtRootC45_39590 PF10397 Adenylosuccinate lyase C-terminus NtRootC45_39590 PF00206 Lyase NtRootC45_39600 PF04444 Catechol dioxygenase N terminus NtRootC45_39600 PF00775 Dioxygenase NtRootC45_39610 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NtRootC45_39610 PF00775 Dioxygenase NtRootC45_39620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootC45_39620 PF01261 Xylose isomerase-like TIM barrel NtRootC45_39630 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NtRootC45_39630 PF08501 Shikimate dehydrogenase substrate binding domain NtRootC45_39640 PF09339 IclR helix-turn-helix domain NtRootC45_39640 PF01614 Bacterial transcriptional regulator NtRootC45_39650 PF00083 Sugar (and other) transporter NtRootC45_39680 PF02597 ThiS family NtRootC45_39700 PF00990 Diguanylate cyclase, GGDEF domain NtRootC45_39700 PF05230 MASE2 domain NtRootC45_39730 PF07690 Major Facilitator Superfamily NtRootC45_39740 PF07691 PA14 domain NtRootC45_39740 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootC45_39740 PF14310 Fibronectin type III-like domain NtRootC45_39740 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootC45_39760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC45_39760 PF03466 LysR substrate binding domain NtRootC45_39830 PF02447 GntP family permease NtRootC45_39840 PF01081 KDPG and KHG aldolase NtRootC45_39850 PF07969 Amidohydrolase family NtRootC45_39870 PF00294 pfkB family carbohydrate kinase NtRootC45_39880 PF01614 Bacterial transcriptional regulator NtRootC45_39880 PF09339 IclR helix-turn-helix domain NtRootC45_39890 PF01042 Endoribonuclease L-PSP NtRootC45_39900 PF00795 Carbon-nitrogen hydrolase NtRootC45_39900 PF00535 Glycosyl transferase family 2 NtRootC45_39970 PF03976 Polyphosphate kinase 2 (PPK2) NtRootC45_39990 PF01380 SIS domain NtRootC45_39990 PF01418 Helix-turn-helix domain, rpiR family NtRootC45_40000 PF07075 Protein of unknown function (DUF1343) NtRootC45_40010 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootC45_40010 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootC45_40050 PF02583 Metal-sensitive transcriptional repressor NtRootC45_40060 PF00403 Heavy-metal-associated domain NtRootC45_40070 PF00403 Heavy-metal-associated domain NtRootC45_40170 PF01554 MatE NtRootC45_40190 PF07681 DoxX NtRootC45_40220 PF00391 PEP-utilising enzyme, mobile domain NtRootC45_40220 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootC45_40240 PF03061 Thioesterase superfamily NtRootC45_40270 PF02780 Transketolase, C-terminal domain NtRootC45_40270 PF02779 Transketolase, pyrimidine binding domain NtRootC45_40280 PF00456 Transketolase, thiamine diphosphate binding domain NtRootC45_40290 PF00083 Sugar (and other) transporter NtRootC45_40320 PF02733 Dak1 domain NtRootC45_40320 PF02734 DAK2 domain NtRootC45_40330 PF02502 Ribose/Galactose Isomerase NtRootC45_40360 PF00772 DnaB-like helicase N terminal domain NtRootC45_40360 PF03796 DnaB-like helicase C terminal domain NtRootC45_40400 PF03358 NADPH-dependent FMN reductase NtRootC45_40420 PF00135 Carboxylesterase family NtRootC45_40440 PF02515 CoA-transferase family III NtRootC45_40450 PF00682 HMGL-like NtRootC45_40520 PF00005 ABC transporter NtRootC45_40540 PF02567 Phenazine biosynthesis-like protein NtRootC45_40560 PF13936 Helix-turn-helix domain NtRootC45_40560 PF00665 Integrase core domain NtRootC45_40570 PF03948 Ribosomal protein L9, C-terminal domain NtRootC45_40570 PF01281 Ribosomal protein L9, N-terminal domain NtRootC45_40580 PF01084 Ribosomal protein S18 NtRootC45_40590 PF00436 Single-strand binding protein family NtRootC45_40600 PF01250 Ribosomal protein S6 NtRootC45_40630 PF00324 Amino acid permease NtRootC45_40640 PF02127 Aminopeptidase I zinc metalloprotease (M18) NtRootC45_40700 PF01168 Alanine racemase, N-terminal domain NtRootC45_40700 PF00842 Alanine racemase, C-terminal domain NtRootC45_40710 PF00324 Amino acid permease NtRootC45_40720 PF00196 Bacterial regulatory proteins, luxR family NtRootC45_40720 PF00072 Response regulator receiver domain NtRootC45_40730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC45_40730 PF07730 Histidine kinase NtRootC45_40750 PF00005 ABC transporter NtRootC45_40760 PF00781 Diacylglycerol kinase catalytic domain NtRootC45_40780 PF07690 Major Facilitator Superfamily NtRootC45_40790 PF00455 DeoR C terminal sensor domain NtRootC45_40790 PF08220 DeoR-like helix-turn-helix domain NtRootC45_40800 PF00005 ABC transporter NtRootC45_40800 PF12848 ABC transporter NtRootC45_40810 PF01494 FAD binding domain NtRootC45_40820 PF00905 Penicillin binding protein transpeptidase domain NtRootC45_40830 PF16338 Domain of unknown function (DUF4968) NtRootC45_40830 PF17137 Domain of unknown function (DUF5110) NtRootC45_40830 PF01055 Glycosyl hydrolases family 31 NtRootC45_40840 PF00072 Response regulator receiver domain NtRootC45_40840 PF00196 Bacterial regulatory proteins, luxR family NtRootC45_40850 PF07730 Histidine kinase NtRootC45_40870 PF00005 ABC transporter NtRootC45_40880 PF01638 HxlR-like helix-turn-helix NtRootC45_40890 PF13460 NAD(P)H-binding NtRootC45_40930 PF00300 Histidine phosphatase superfamily (branch 1) NtRootC45_40940 PF12627 Probable RNA and SrmB- binding site of polymerase A NtRootC45_40940 PF01966 HD domain NtRootC45_40940 PF01743 Poly A polymerase head domain NtRootC45_40950 PF00293 NUDIX domain NtRootC45_40960 PF03023 Lipid II flippase MurJ NtRootC45_40980 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC45_40990 PF00085 Thioredoxin NtRootC45_41030 PF02195 ParB-like nuclease domain NtRootC45_41030 PF17762 HTH domain found in ParB protein NtRootC45_41040 PF13614 AAA domain NtRootC45_41050 PF02527 rRNA small subunit methyltransferase G NtRootC45_41070 PF02096 60Kd inner membrane protein NtRootC45_41080 PF01809 Putative membrane protein insertion efficiency factor NtRootC45_41090 PF00825 Ribonuclease P NtRootC45_41100 PF00468 Ribosomal protein L34 NtRootC45_41130 PF02625 XdhC and CoxI family NtRootC45_41130 PF13478 XdhC Rossmann domain NtRootC45_41160 PF00795 Carbon-nitrogen hydrolase NtRootC45_41180 PF01494 FAD binding domain NtRootC45_41210 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NtRootC45_41210 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NtRootC45_41220 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NtRootC45_41260 PF03450 CO dehydrogenase flavoprotein C-terminal domain NtRootC45_41260 PF00941 FAD binding domain in molybdopterin dehydrogenase NtRootC45_41290 PF01593 Flavin containing amine oxidoreductase NtRootC45_41300 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NtRootC45_41300 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NtRootC45_41320 PF01799 [2Fe-2S] binding domain NtRootC45_41320 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootC45_41350 PF00665 Integrase core domain NtRootC45_41380 PF06463 Molybdenum Cofactor Synthesis C NtRootC45_41380 PF04055 Radical SAM superfamily NtRootC45_41390 PF00994 Probable molybdopterin binding domain NtRootC45_41390 PF03454 MoeA C-terminal region (domain IV) NtRootC45_41390 PF03453 MoeA N-terminal region (domain I and II) NtRootC45_41400 PF01967 MoaC family NtRootC45_41410 PF02391 MoaE protein NtRootC45_41430 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC45_41440 PF03459 TOBE domain NtRootC45_41440 PF00005 ABC transporter NtRootC45_41470 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootC45_41490 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_41520 PF01565 FAD binding domain NtRootC45_41520 PF08031 Berberine and berberine like NtRootC45_41820 PF13614 AAA domain NtRootC45_41870 PF09299 Mu transposase, C-terminal NtRootC45_41870 PF00665 Integrase core domain NtRootC45_41880 PF13401 AAA domain NtRootC45_41890 PF00239 Resolvase, N terminal domain NtRootC45_41890 PF02796 Helix-turn-helix domain of resolvase NtRootC45_41950 PF04679 ATP dependent DNA ligase C terminal region NtRootC45_41950 PF01068 ATP dependent DNA ligase domain NtRootC45_41980 PF12697 Alpha/beta hydrolase family NtRootC45_42000 PF07859 alpha/beta hydrolase fold NtRootC45_42010 PF00083 Sugar (and other) transporter NtRootC45_42020 PF00356 Bacterial regulatory proteins, lacI family NtRootC45_42030 PF02195 ParB-like nuclease domain NtRootC45_42030 PF17762 HTH domain found in ParB protein NtRootC45_42070 PF00436 Single-strand binding protein family NtRootC45_42150 PF04294 VanW like protein NtRootC45_42220 PF02156 Glycosyl hydrolase family 26 NtRootC45_42270 PF00392 Bacterial regulatory proteins, gntR family NtRootC45_42270 PF07729 FCD domain NtRootC45_42280 PF00005 ABC transporter NtRootC45_42290 PF02653 Branched-chain amino acid transport system / permease component NtRootC45_42300 PF02653 Branched-chain amino acid transport system / permease component NtRootC45_42320 PF00665 Integrase core domain NtRootC45_42320 PF13936 Helix-turn-helix domain NtRootC45_42350 PF05199 GMC oxidoreductase NtRootC45_42350 PF00732 GMC oxidoreductase NtRootC45_42360 PF00171 Aldehyde dehydrogenase family NtRootC45_42370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC45_42370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC45_42410 PF02595 Glycerate kinase family NtRootC45_42430 PF00271 Helicase conserved C-terminal domain NtRootC45_42480 PF02899 Phage integrase, N-terminal SAM-like domain NtRootC45_42480 PF00589 Phage integrase family NtRootC45_42490 PF00589 Phage integrase family NtRootC45_42490 PF02899 Phage integrase, N-terminal SAM-like domain NtRootC45_42530 PF03358 NADPH-dependent FMN reductase NtRootC45_42550 PF01593 Flavin containing amine oxidoreductase NtRootC45_42580 PF00171 Aldehyde dehydrogenase family NtRootC45_42590 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC45_42600 PF00893 Small Multidrug Resistance protein NtRootC45_42610 PF00893 Small Multidrug Resistance protein NtRootC45_42620 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NtRootC45_42620 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NtRootC45_42630 PF01266 FAD dependent oxidoreductase NtRootC45_42630 PF16350 FAD dependent oxidoreductase central domain NtRootC45_42630 PF01571 Aminomethyltransferase folate-binding domain NtRootC45_42630 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC45_42640 PF00551 Formyl transferase NtRootC45_42670 PF13556 PucR C-terminal helix-turn-helix domain NtRootC45_42670 PF07905 Purine catabolism regulatory protein-like family