locus-tag class description NtRootC7_00010 PF00308 Bacterial dnaA protein NtRootC7_00010 PF08299 Bacterial dnaA protein helix-turn-helix NtRootC7_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain NtRootC7_00020 PF02767 DNA polymerase III beta subunit, central domain NtRootC7_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain NtRootC7_00030 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NtRootC7_00030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC7_00040 PF02463 RecF/RecN/SMC N terminal domain NtRootC7_00050 PF05258 Dna[CI] antecedent, DciA NtRootC7_00060 PF01751 Toprim domain NtRootC7_00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_00060 PF00204 DNA gyrase B NtRootC7_00060 PF00986 DNA gyrase B subunit, carboxyl terminus NtRootC7_00070 PF03989 DNA gyrase C-terminal domain, beta-propeller NtRootC7_00070 PF00521 DNA gyrase/topoisomerase IV, subunit A NtRootC7_00090 PF12089 Transmembrane domain of unknown function (DUF3566) NtRootC7_00130 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NtRootC7_00140 PF01694 Rhomboid family NtRootC7_00160 PF03352 Methyladenine glycosylase NtRootC7_00180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NtRootC7_00180 PF12833 Helix-turn-helix domain NtRootC7_00180 PF02805 Metal binding domain of Ada NtRootC7_00180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NtRootC7_00190 PF04542 Sigma-70 region 2 NtRootC7_00190 PF04545 Sigma-70, region 4 NtRootC7_00200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NtRootC7_00200 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NtRootC7_00210 PF06781 Cell division protein CrgA NtRootC7_00220 PF04203 Sortase domain NtRootC7_00230 PF00117 Glutamine amidotransferase class-I NtRootC7_00240 PF00069 Protein kinase domain NtRootC7_00240 PF03793 PASTA domain NtRootC7_00250 PF00069 Protein kinase domain NtRootC7_00260 PF00905 Penicillin binding protein transpeptidase domain NtRootC7_00270 PF01098 Cell cycle protein NtRootC7_00290 PF16697 Inner membrane component of T3SS, cytoplasmic domain NtRootC7_00300 PF12401 Protein of unknown function (DUF2662) NtRootC7_00300 PF00498 FHA domain NtRootC7_00310 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_00310 PF07729 FCD domain NtRootC7_00320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootC7_00320 PF13378 Enolase C-terminal domain-like NtRootC7_00340 PF12146 Serine aminopeptidase, S33 NtRootC7_00350 PF01425 Amidase NtRootC7_00390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC7_00390 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC7_00390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC7_00420 PF07690 Major Facilitator Superfamily NtRootC7_00430 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NtRootC7_00460 PF01593 Flavin containing amine oxidoreductase NtRootC7_00470 PF00582 Universal stress protein family NtRootC7_00500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootC7_00530 PF07729 FCD domain NtRootC7_00530 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_00540 PF03746 LamB/YcsF family NtRootC7_00550 PF00083 Sugar (and other) transporter NtRootC7_00550 PF07690 Major Facilitator Superfamily NtRootC7_00560 PF02682 Carboxyltransferase domain, subdomain C and D NtRootC7_00570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootC7_00570 PF02785 Biotin carboxylase C-terminal domain NtRootC7_00570 PF00289 Biotin carboxylase, N-terminal domain NtRootC7_00570 PF00364 Biotin-requiring enzyme NtRootC7_00580 PF00480 ROK family NtRootC7_00590 PF13416 Bacterial extracellular solute-binding protein NtRootC7_00610 PF14785 Maltose transport system permease protein MalF P2 domain NtRootC7_00610 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_00620 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_00640 PF00480 ROK family NtRootC7_00650 PF16385 Domain of unknown function NtRootC7_00650 PF00884 Sulfatase NtRootC7_00670 PF03932 CutC family NtRootC7_00680 PF04030 D-arabinono-1,4-lactone oxidase NtRootC7_00680 PF01565 FAD binding domain NtRootC7_00690 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_00700 PF01638 HxlR-like helix-turn-helix NtRootC7_00720 PF01758 Sodium Bile acid symporter family NtRootC7_00730 PF01740 STAS domain NtRootC7_00730 PF00916 Sulfate permease family NtRootC7_00760 PF00294 pfkB family carbohydrate kinase NtRootC7_00770 PF13409 Glutathione S-transferase, N-terminal domain NtRootC7_00820 PF03009 Glycerophosphoryl diester phosphodiesterase family NtRootC7_00830 PF02929 Beta galactosidase small chain NtRootC7_00830 PF02837 Glycosyl hydrolases family 2, sugar binding domain NtRootC7_00830 PF16353 Domain of unknown function(DUF4981) NtRootC7_00830 PF00703 Glycosyl hydrolases family 2 NtRootC7_00830 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NtRootC7_00840 PF01842 ACT domain NtRootC7_00840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC7_00840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootC7_00850 PF02595 Glycerate kinase family NtRootC7_00860 PF10944 Protein of unknown function (DUF2630) NtRootC7_00950 PF04294 VanW like protein NtRootC7_00980 PF02586 SOS response associated peptidase (SRAP) NtRootC7_01010 PF01965 DJ-1/PfpI family NtRootC7_01030 PF00005 ABC transporter NtRootC7_01050 PF00196 Bacterial regulatory proteins, luxR family NtRootC7_01050 PF00072 Response regulator receiver domain NtRootC7_01060 PF07730 Histidine kinase NtRootC7_01060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_01090 PF00860 Permease family NtRootC7_01110 PF00881 Nitroreductase family NtRootC7_01130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootC7_01130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootC7_01130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootC7_01130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootC7_01150 PF00854 POT family NtRootC7_01160 PF01425 Amidase NtRootC7_01170 PF03575 Peptidase family S51 NtRootC7_01180 PF00581 Rhodanese-like domain NtRootC7_01180 PF01206 Sulfurtransferase TusA NtRootC7_01190 PF01842 ACT domain NtRootC7_01190 PF00800 Prephenate dehydratase NtRootC7_01210 PF00781 Diacylglycerol kinase catalytic domain NtRootC7_01220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootC7_01220 PF02403 Seryl-tRNA synthetase N-terminal domain NtRootC7_01230 PF13649 Methyltransferase domain NtRootC7_01240 PF13538 UvrD-like helicase C-terminal domain NtRootC7_01270 PF04542 Sigma-70 region 2 NtRootC7_01270 PF04539 Sigma-70 region 3 NtRootC7_01270 PF04545 Sigma-70, region 4 NtRootC7_01380 PF00719 Inorganic pyrophosphatase NtRootC7_01390 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NtRootC7_01410 PF09179 TilS substrate binding domain NtRootC7_01410 PF01171 PP-loop family NtRootC7_01420 PF00156 Phosphoribosyl transferase domain NtRootC7_01440 PF01434 Peptidase family M41 NtRootC7_01440 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC7_01440 PF17862 AAA+ lid domain NtRootC7_01450 PF01227 GTP cyclohydrolase I NtRootC7_01460 PF00809 Pterin binding enzyme NtRootC7_01470 PF02152 Dihydroneopterin aldolase NtRootC7_01480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NtRootC7_01530 PF02569 Pantoate-beta-alanine ligase NtRootC7_01550 PF07690 Major Facilitator Superfamily NtRootC7_01600 PF01336 OB-fold nucleic acid binding domain NtRootC7_01600 PF00152 tRNA synthetases class II (D, K and N) NtRootC7_01620 PF11774 Lsr2 NtRootC7_01630 PF07724 AAA domain (Cdc48 subfamily) NtRootC7_01630 PF02861 Clp amino terminal domain, pathogenicity island component NtRootC7_01630 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootC7_01630 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC7_01630 PF17871 AAA lid domain NtRootC7_01640 PF03033 Glycosyltransferase family 28 N-terminal domain NtRootC7_01650 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NtRootC7_01650 PF07676 WD40-like Beta Propeller Repeat NtRootC7_01650 PF00326 Prolyl oligopeptidase family NtRootC7_01660 PF00583 Acetyltransferase (GNAT) family NtRootC7_01670 PF08031 Berberine and berberine like NtRootC7_01670 PF01565 FAD binding domain NtRootC7_01690 PF02733 Dak1 domain NtRootC7_01700 PF02734 DAK2 domain NtRootC7_01710 PF03610 PTS system fructose IIA component NtRootC7_01770 PF08376 Nitrate and nitrite sensing NtRootC7_01770 PF03861 ANTAR domain NtRootC7_01790 PF00375 Sodium:dicarboxylate symporter family NtRootC7_01810 PF00633 Helix-hairpin-helix motif NtRootC7_01810 PF00730 HhH-GPD superfamily base excision DNA repair protein NtRootC7_01830 PF02457 DisA bacterial checkpoint controller nucleotide-binding NtRootC7_01830 PF10635 DisA bacterial checkpoint controller linker region NtRootC7_01830 PF00633 Helix-hairpin-helix motif NtRootC7_01850 PF18073 Rubredoxin metal binding domain NtRootC7_01860 PF01569 PAP2 superfamily NtRootC7_01880 PF12849 PBP superfamily domain NtRootC7_01890 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_01900 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_01910 PF00005 ABC transporter NtRootC7_01960 PF01384 Phosphate transporter family NtRootC7_02010 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NtRootC7_02030 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_02040 PF14031 Putative serine dehydratase domain NtRootC7_02070 PF00547 Urease, gamma subunit NtRootC7_02080 PF00699 Urease beta subunit NtRootC7_02090 PF01979 Amidohydrolase family NtRootC7_02090 PF00449 Urease alpha-subunit, N-terminal domain NtRootC7_02100 PF05194 UreE urease accessory protein, C-terminal domain NtRootC7_02100 PF02814 UreE urease accessory protein, N-terminal domain NtRootC7_02110 PF01730 UreF NtRootC7_02120 PF02492 CobW/HypB/UreG, nucleotide-binding domain NtRootC7_02130 PF01774 UreD urease accessory protein NtRootC7_02140 PF03824 High-affinity nickel-transport protein NtRootC7_02180 PF00583 Acetyltransferase (GNAT) family NtRootC7_02190 PF00128 Alpha amylase, catalytic domain NtRootC7_02190 PF02806 Alpha amylase, C-terminal all-beta domain NtRootC7_02190 PF03714 Bacterial pullanase-associated domain NtRootC7_02230 PF10282 Lactonase, 7-bladed beta-propeller NtRootC7_02240 PF00248 Aldo/keto reductase family NtRootC7_02260 PF00248 Aldo/keto reductase family NtRootC7_02270 PF00248 Aldo/keto reductase family NtRootC7_02290 PF13936 Helix-turn-helix domain NtRootC7_02290 PF00665 Integrase core domain NtRootC7_02300 PF07311 Dodecin NtRootC7_02340 PF02796 Helix-turn-helix domain of resolvase NtRootC7_02340 PF00239 Resolvase, N terminal domain NtRootC7_02350 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC7_02350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC7_02350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC7_02360 PF04199 Putative cyclase NtRootC7_02370 PF01593 Flavin containing amine oxidoreductase NtRootC7_02380 PF01613 Flavin reductase like domain NtRootC7_02420 PF14525 AraC-binding-like domain NtRootC7_02420 PF12833 Helix-turn-helix domain NtRootC7_02430 PF07729 FCD domain NtRootC7_02430 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_02440 PF00561 alpha/beta hydrolase fold NtRootC7_02460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootC7_02460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC7_02470 PF02447 GntP family permease NtRootC7_02480 PF01116 Fructose-bisphosphate aldolase class-II NtRootC7_02580 PF00282 Pyridoxal-dependent decarboxylase conserved domain NtRootC7_02590 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NtRootC7_02610 PF04183 IucA / IucC family NtRootC7_02610 PF06276 Ferric iron reductase FhuF-like transporter NtRootC7_02650 PF00005 ABC transporter NtRootC7_02680 PF00535 Glycosyl transferase family 2 NtRootC7_02700 PF00398 Ribosomal RNA adenine dimethylase NtRootC7_02710 PF00202 Aminotransferase class-III NtRootC7_02780 PF00583 Acetyltransferase (GNAT) family NtRootC7_02810 PF00892 EamA-like transporter family NtRootC7_02820 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_02820 PF00155 Aminotransferase class I and II NtRootC7_02830 PF07729 FCD domain NtRootC7_02830 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_02840 PF13416 Bacterial extracellular solute-binding protein NtRootC7_02850 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_02860 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_02870 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootC7_02870 PF13378 Enolase C-terminal domain-like NtRootC7_02880 PF00171 Aldehyde dehydrogenase family NtRootC7_02900 PF00083 Sugar (and other) transporter NtRootC7_02910 PF17827 PrmC N-terminal domain NtRootC7_02910 PF13649 Methyltransferase domain NtRootC7_02940 PF13298 DNA polymerase Ligase (LigD) NtRootC7_02940 PF04679 ATP dependent DNA ligase C terminal region NtRootC7_02940 PF01068 ATP dependent DNA ligase domain NtRootC7_02950 PF02735 Ku70/Ku80 beta-barrel domain NtRootC7_02960 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_02970 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_03000 PF07729 FCD domain NtRootC7_03000 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_03050 PF00210 Ferritin-like domain NtRootC7_03080 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_03080 PF13977 BetI-type transcriptional repressor, C-terminal NtRootC7_03100 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NtRootC7_03100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NtRootC7_03110 PF00294 pfkB family carbohydrate kinase NtRootC7_03120 PF08220 DeoR-like helix-turn-helix domain NtRootC7_03120 PF00455 DeoR C terminal sensor domain NtRootC7_03170 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootC7_03210 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_03220 PF13419 Haloacid dehalogenase-like hydrolase NtRootC7_03230 PF03632 Glycosyl hydrolase family 65 central catalytic domain NtRootC7_03230 PF03636 Glycosyl hydrolase family 65, N-terminal domain NtRootC7_03230 PF03633 Glycosyl hydrolase family 65, C-terminal domain NtRootC7_03270 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NtRootC7_03270 PF01409 tRNA synthetases class II core domain (F) NtRootC7_03290 PF01047 MarR family NtRootC7_03300 PF01040 UbiA prenyltransferase family NtRootC7_03320 PF01593 Flavin containing amine oxidoreductase NtRootC7_03340 PF00348 Polyprenyl synthetase NtRootC7_03350 PF00293 NUDIX domain NtRootC7_03420 PF00920 Dehydratase family NtRootC7_03440 PF03466 LysR substrate binding domain NtRootC7_03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_03450 PF00892 EamA-like transporter family NtRootC7_03460 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_03470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_03470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_03480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_03480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_03490 PF01261 Xylose isomerase-like TIM barrel NtRootC7_03500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_03500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_03510 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_03550 PF03746 LamB/YcsF family NtRootC7_03560 PF02626 Carboxyltransferase domain, subdomain A and B NtRootC7_03580 PF04286 Protein of unknown function (DUF445) NtRootC7_03590 PF03009 Glycerophosphoryl diester phosphodiesterase family NtRootC7_03650 PF01910 Thiamine-binding protein NtRootC7_03660 PF01596 O-methyltransferase NtRootC7_03670 PF00583 Acetyltransferase (GNAT) family NtRootC7_03700 PF00664 ABC transporter transmembrane region NtRootC7_03700 PF00005 ABC transporter NtRootC7_03710 PF00664 ABC transporter transmembrane region NtRootC7_03710 PF00005 ABC transporter NtRootC7_03720 PF12833 Helix-turn-helix domain NtRootC7_03720 PF02311 AraC-like ligand binding domain NtRootC7_03760 PF01032 FecCD transport family NtRootC7_03770 PF01032 FecCD transport family NtRootC7_03780 PF00005 ABC transporter NtRootC7_03790 PF00665 Integrase core domain NtRootC7_03790 PF13936 Helix-turn-helix domain NtRootC7_03810 PF00083 Sugar (and other) transporter NtRootC7_03830 PF00665 Integrase core domain NtRootC7_03830 PF13936 Helix-turn-helix domain NtRootC7_03850 PF00324 Amino acid permease NtRootC7_03890 PF01175 Urocanase Rossmann-like domain NtRootC7_03890 PF17392 Urocanase C-terminal domain NtRootC7_03890 PF17391 Urocanase N-terminal domain NtRootC7_03900 PF00221 Aromatic amino acid lyase NtRootC7_03930 PF00665 Integrase core domain NtRootC7_03930 PF13936 Helix-turn-helix domain NtRootC7_03950 PF00491 Arginase family NtRootC7_03960 PF00860 Permease family NtRootC7_04010 PF00582 Universal stress protein family NtRootC7_04020 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootC7_04020 PF00391 PEP-utilising enzyme, mobile domain NtRootC7_04030 PF01545 Cation efflux family NtRootC7_04030 PF16916 Dimerisation domain of Zinc Transporter NtRootC7_04050 PF00294 pfkB family carbohydrate kinase NtRootC7_04210 PF01545 Cation efflux family NtRootC7_04230 PF01022 Bacterial regulatory protein, arsR family NtRootC7_04260 PF01547 Bacterial extracellular solute-binding protein NtRootC7_04270 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_04280 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_04300 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_04340 PF00196 Bacterial regulatory proteins, luxR family NtRootC7_04340 PF00072 Response regulator receiver domain NtRootC7_04350 PF07730 Histidine kinase NtRootC7_04370 PF12796 Ankyrin repeats (3 copies) NtRootC7_04380 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootC7_04380 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootC7_04390 PF01144 Coenzyme A transferase NtRootC7_04400 PF01144 Coenzyme A transferase NtRootC7_04450 PF02469 Fasciclin domain NtRootC7_04470 PF02028 BCCT, betaine/carnitine/choline family transporter NtRootC7_04480 PF09339 IclR helix-turn-helix domain NtRootC7_04480 PF01614 Bacterial transcriptional regulator NtRootC7_04490 PF02634 FdhD/NarQ family NtRootC7_04500 PF03453 MoeA N-terminal region (domain I and II) NtRootC7_04500 PF00994 Probable molybdopterin binding domain NtRootC7_04500 PF03454 MoeA C-terminal region (domain IV) NtRootC7_04510 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_04510 PF00107 Zinc-binding dehydrogenase NtRootC7_04520 PF00384 Molybdopterin oxidoreductase NtRootC7_04520 PF01568 Molydopterin dinucleotide binding domain NtRootC7_04530 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NtRootC7_04530 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NtRootC7_04540 PF04961 Formiminotransferase-cyclodeaminase NtRootC7_04550 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC7_04550 PF16350 FAD dependent oxidoreductase central domain NtRootC7_04550 PF01266 FAD dependent oxidoreductase NtRootC7_04550 PF01571 Aminomethyltransferase folate-binding domain NtRootC7_04560 PF00551 Formyl transferase NtRootC7_04570 PF07729 FCD domain NtRootC7_04570 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_04580 PF01680 SOR/SNZ family NtRootC7_04600 PF03466 LysR substrate binding domain NtRootC7_04600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_04610 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NtRootC7_04610 PF00355 Rieske [2Fe-2S] domain NtRootC7_04620 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootC7_04620 PF00175 Oxidoreductase NAD-binding domain NtRootC7_04620 PF00970 Oxidoreductase FAD-binding domain NtRootC7_04630 PF00196 Bacterial regulatory proteins, luxR family NtRootC7_04630 PF00072 Response regulator receiver domain NtRootC7_04640 PF01380 SIS domain NtRootC7_04650 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NtRootC7_04680 PF00875 DNA photolyase NtRootC7_04680 PF03441 FAD binding domain of DNA photolyase NtRootC7_04700 PF00171 Aldehyde dehydrogenase family NtRootC7_04710 PF00378 Enoyl-CoA hydratase/isomerase NtRootC7_04720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC7_04720 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootC7_04730 PF00378 Enoyl-CoA hydratase/isomerase NtRootC7_04770 PF00501 AMP-binding enzyme NtRootC7_04770 PF13193 AMP-binding enzyme C-terminal domain NtRootC7_04780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC7_04780 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC7_04780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC7_04800 PF00732 GMC oxidoreductase NtRootC7_04800 PF05199 GMC oxidoreductase NtRootC7_04810 PF00171 Aldehyde dehydrogenase family NtRootC7_04850 PF00376 MerR family regulatory protein NtRootC7_04850 PF09278 MerR, DNA binding NtRootC7_04860 PF03551 Transcriptional regulator PadR-like family NtRootC7_04880 PF02540 NAD synthase NtRootC7_04890 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_04910 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_04920 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_04940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_04940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_04960 PF02614 Glucuronate isomerase NtRootC7_04970 PF01232 Mannitol dehydrogenase Rossmann domain NtRootC7_04970 PF08125 Mannitol dehydrogenase C-terminal domain NtRootC7_04980 PF13378 Enolase C-terminal domain-like NtRootC7_04980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootC7_04990 PF01202 Shikimate kinase NtRootC7_05000 PF13407 Periplasmic binding protein domain NtRootC7_05010 PF00005 ABC transporter NtRootC7_05020 PF02653 Branched-chain amino acid transport system / permease component NtRootC7_05030 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_05040 PF00156 Phosphoribosyl transferase domain NtRootC7_05070 PF13344 Haloacid dehalogenase-like hydrolase NtRootC7_05100 PF13936 Helix-turn-helix domain NtRootC7_05100 PF00665 Integrase core domain NtRootC7_05120 PF13936 Helix-turn-helix domain NtRootC7_05120 PF00665 Integrase core domain NtRootC7_05130 PF01116 Fructose-bisphosphate aldolase class-II NtRootC7_05150 PF00005 ABC transporter NtRootC7_05160 PF01032 FecCD transport family NtRootC7_05170 PF01032 FecCD transport family NtRootC7_05180 PF01497 Periplasmic binding protein NtRootC7_05250 PF00709 Adenylosuccinate synthetase NtRootC7_05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_05260 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_05260 PF07689 KaiB domain NtRootC7_05280 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_05290 PF07690 Major Facilitator Superfamily NtRootC7_05300 PF08450 SMP-30/Gluconolactonase/LRE-like region NtRootC7_05320 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_05320 PF00107 Zinc-binding dehydrogenase NtRootC7_05320 PF16197 Ketoacyl-synthetase C-terminal extension NtRootC7_05320 PF08659 KR domain NtRootC7_05320 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootC7_05320 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootC7_05320 PF00550 Phosphopantetheine attachment site NtRootC7_05320 PF00698 Acyl transferase domain NtRootC7_05320 PF14765 Polyketide synthase dehydratase NtRootC7_05330 PF00005 ABC transporter NtRootC7_05330 PF16326 ABC transporter C-terminal domain NtRootC7_05330 PF12848 ABC transporter NtRootC7_05350 PF00561 alpha/beta hydrolase fold NtRootC7_05370 PF07690 Major Facilitator Superfamily NtRootC7_05370 PF00083 Sugar (and other) transporter NtRootC7_05380 PF03471 Transporter associated domain NtRootC7_05380 PF00999 Sodium/hydrogen exchanger family NtRootC7_05380 PF02080 TrkA-C domain NtRootC7_05390 PF11999 Protein of unknown function (DUF3494) NtRootC7_05390 PF02368 Bacterial Ig-like domain (group 2) NtRootC7_05420 PF07859 alpha/beta hydrolase fold NtRootC7_05440 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_05450 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC7_05460 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_05470 PF00005 ABC transporter NtRootC7_05480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_05480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_05490 PF01266 FAD dependent oxidoreductase NtRootC7_05520 PF01594 AI-2E family transporter NtRootC7_05580 PF13380 CoA binding domain NtRootC7_05610 PF04237 YjbR NtRootC7_05620 PF01547 Bacterial extracellular solute-binding protein NtRootC7_05630 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_05640 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_05660 PF14525 AraC-binding-like domain NtRootC7_05660 PF12833 Helix-turn-helix domain NtRootC7_05690 PF01613 Flavin reductase like domain NtRootC7_05710 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal NtRootC7_05710 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal NtRootC7_05730 PF00795 Carbon-nitrogen hydrolase NtRootC7_05740 PF00083 Sugar (and other) transporter NtRootC7_05790 PF00437 Type II/IV secretion system protein NtRootC7_05790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NtRootC7_05800 PF17151 Periplasmic sensor domain NtRootC7_05800 PF00990 Diguanylate cyclase, GGDEF domain NtRootC7_05820 PF00990 Diguanylate cyclase, GGDEF domain NtRootC7_05820 PF03707 Bacterial signalling protein N terminal repeat NtRootC7_05820 PF00563 EAL domain NtRootC7_05830 PF00586 AIR synthase related protein, N-terminal domain NtRootC7_05830 PF02769 AIR synthase related protein, C-terminal domain NtRootC7_05830 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NtRootC7_05880 PF05067 Manganese containing catalase NtRootC7_05890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC7_05900 PF13088 BNR repeat-like domain NtRootC7_05900 PF00754 F5/8 type C domain NtRootC7_05900 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase NtRootC7_05910 PF00082 Subtilase family NtRootC7_05910 PF06280 Fn3-like domain NtRootC7_05910 PF00746 LPXTG cell wall anchor motif NtRootC7_05910 PF02225 PA domain NtRootC7_05950 PF01047 MarR family NtRootC7_05970 PF00665 Integrase core domain NtRootC7_05970 PF13936 Helix-turn-helix domain NtRootC7_05990 PF06305 Lipopolysaccharide assembly protein A domain NtRootC7_06010 PF14310 Fibronectin type III-like domain NtRootC7_06010 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootC7_06010 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootC7_06010 PF07691 PA14 domain NtRootC7_06060 PF04314 Copper chaperone PCu(A)C NtRootC7_06070 PF04261 Dyp-type peroxidase family NtRootC7_06070 PF10518 TAT (twin-arginine translocation) pathway signal sequence NtRootC7_06080 PF00696 Amino acid kinase family NtRootC7_06080 PF13840 ACT domain NtRootC7_06080 PF01842 ACT domain NtRootC7_06120 PF13662 Toprim domain NtRootC7_06120 PF02132 RecR protein NtRootC7_06130 PF12169 DNA polymerase III subunits gamma and tau domain III NtRootC7_06140 PF01784 NIF3 (NGG1p interacting factor 3) NtRootC7_06160 PF00171 Aldehyde dehydrogenase family NtRootC7_06180 PF07690 Major Facilitator Superfamily NtRootC7_06190 PF01047 MarR family NtRootC7_06250 PF01464 Transglycosylase SLT domain NtRootC7_06250 PF10145 Phage-related minor tail protein NtRootC7_06250 PF01551 Peptidase family M23 NtRootC7_06260 PF00255 Glutathione peroxidase NtRootC7_06270 PF00149 Calcineurin-like phosphoesterase NtRootC7_06280 PF17102 Stealth protein CR3, conserved region 3 NtRootC7_06280 PF17103 Stealth protein CR4, conserved region 4 NtRootC7_06280 PF17101 Stealth protein CR1, conserved region 1 NtRootC7_06280 PF11380 Stealth protein CR2, conserved region 2 NtRootC7_06330 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_06350 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_06360 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_06370 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NtRootC7_06390 PF13439 Glycosyltransferase Family 4 NtRootC7_06420 PF18835 Beta helix repeat of Inulin fructotransferase NtRootC7_06420 PF05048 Periplasmic copper-binding protein (NosD) NtRootC7_06430 PF00294 pfkB family carbohydrate kinase NtRootC7_06440 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootC7_06440 PF08244 Glycosyl hydrolases family 32 C terminal NtRootC7_06450 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_06460 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_06470 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_06490 PF18835 Beta helix repeat of Inulin fructotransferase NtRootC7_06490 PF05048 Periplasmic copper-binding protein (NosD) NtRootC7_06500 PF00582 Universal stress protein family NtRootC7_06510 PF01970 Tripartite tricarboxylate transporter TctA family NtRootC7_06540 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NtRootC7_06540 PF17203 Single cache domain 3 NtRootC7_06540 PF00989 PAS fold NtRootC7_06540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_06550 PF12431 Transcriptional regulator NtRootC7_06550 PF00072 Response regulator receiver domain NtRootC7_06560 PF03928 Haem-degrading NtRootC7_06570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_06570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_06580 PF07676 WD40-like Beta Propeller Repeat NtRootC7_06600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_06600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_06610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_06610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_06630 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_06640 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_06670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_06670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_06680 PF01047 MarR family NtRootC7_06680 PF00480 ROK family NtRootC7_06700 PF01274 Malate synthase NtRootC7_06710 PF00463 Isocitrate lyase family NtRootC7_06720 PF01381 Helix-turn-helix NtRootC7_06770 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_06790 PF08543 Phosphomethylpyrimidine kinase NtRootC7_06810 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_06810 PF08521 Two-component sensor kinase N-terminal NtRootC7_06820 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_06820 PF00072 Response regulator receiver domain NtRootC7_06830 PF00083 Sugar (and other) transporter NtRootC7_06850 PF08338 Domain of unknown function (DUF1731) NtRootC7_06850 PF01370 NAD dependent epimerase/dehydratase family NtRootC7_06860 PF17932 Tetracyclin repressor-like, C-terminal domain NtRootC7_06860 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_06890 PF01702 Queuine tRNA-ribosyltransferase NtRootC7_06960 PF00106 short chain dehydrogenase NtRootC7_06970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC7_06970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC7_06970 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC7_07030 PF00311 Phosphoenolpyruvate carboxylase NtRootC7_07050 PF09335 SNARE associated Golgi protein NtRootC7_07060 PF01661 Macro domain NtRootC7_07070 PF00849 RNA pseudouridylate synthase NtRootC7_07120 PF00155 Aminotransferase class I and II NtRootC7_07140 PF11606 Family 31 carbohydrate binding protein NtRootC7_07160 PF03552 Cellulose synthase NtRootC7_07160 PF00535 Glycosyl transferase family 2 NtRootC7_07160 PF07238 PilZ domain NtRootC7_07170 PF00722 Glycosyl hydrolases family 16 NtRootC7_07180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NtRootC7_07180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootC7_07190 PF00270 DEAD/DEAH box helicase NtRootC7_07190 PF00271 Helicase conserved C-terminal domain NtRootC7_07190 PF08494 DEAD/H associated NtRootC7_07240 PF00999 Sodium/hydrogen exchanger family NtRootC7_07240 PF02254 TrkA-N domain NtRootC7_07240 PF02080 TrkA-C domain NtRootC7_07270 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_07270 PF00107 Zinc-binding dehydrogenase NtRootC7_07290 PF13439 Glycosyltransferase Family 4 NtRootC7_07290 PF00534 Glycosyl transferases group 1 NtRootC7_07320 PF14437 MafB19-like deaminase NtRootC7_07370 PF13419 Haloacid dehalogenase-like hydrolase NtRootC7_07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_07410 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_07410 PF00672 HAMP domain NtRootC7_07420 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_07420 PF00072 Response regulator receiver domain NtRootC7_07430 PF00072 Response regulator receiver domain NtRootC7_07430 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_07450 PF03466 LysR substrate binding domain NtRootC7_07450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_07460 PF00892 EamA-like transporter family NtRootC7_07480 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_07480 PF08361 MAATS-type transcriptional repressor, C-terminal region NtRootC7_07510 PF00403 Heavy-metal-associated domain NtRootC7_07510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootC7_07510 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_07520 PF00581 Rhodanese-like domain NtRootC7_07530 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase NtRootC7_07540 PF00480 ROK family NtRootC7_07550 PF00701 Dihydrodipicolinate synthetase family NtRootC7_07560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC7_07560 PF00005 ABC transporter NtRootC7_07570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC7_07570 PF00005 ABC transporter NtRootC7_07580 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_07590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootC7_07610 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_07610 PF17932 Tetracyclin repressor-like, C-terminal domain NtRootC7_07620 PF07690 Major Facilitator Superfamily NtRootC7_07630 PF04199 Putative cyclase NtRootC7_07640 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC7_07650 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NtRootC7_07650 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NtRootC7_07660 PF00042 Globin NtRootC7_07660 PF00970 Oxidoreductase FAD-binding domain NtRootC7_07660 PF00175 Oxidoreductase NAD-binding domain NtRootC7_07710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootC7_07710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootC7_07710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootC7_07710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootC7_07720 PF09382 RQC domain NtRootC7_07720 PF00270 DEAD/DEAH box helicase NtRootC7_07720 PF00271 Helicase conserved C-terminal domain NtRootC7_07720 PF00570 HRDC domain NtRootC7_07720 PF16124 RecQ zinc-binding NtRootC7_07730 PF07690 Major Facilitator Superfamily NtRootC7_07740 PF00326 Prolyl oligopeptidase family NtRootC7_07740 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NtRootC7_07760 PF00324 Amino acid permease NtRootC7_07770 PF00149 Calcineurin-like phosphoesterase NtRootC7_07800 PF14765 Polyketide synthase dehydratase NtRootC7_07800 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootC7_07800 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootC7_07800 PF00550 Phosphopantetheine attachment site NtRootC7_07800 PF08659 KR domain NtRootC7_07800 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_07800 PF00698 Acyl transferase domain NtRootC7_07800 PF16197 Ketoacyl-synthetase C-terminal extension NtRootC7_07820 PF02554 Carbon starvation protein CstA NtRootC7_07820 PF13722 5TM C-terminal transporter carbon starvation CstA NtRootC7_07840 PF10759 Protein of unknown function (DUF2587) NtRootC7_07860 PF00248 Aldo/keto reductase family NtRootC7_07880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_07880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_07890 PF01261 Xylose isomerase-like TIM barrel NtRootC7_07900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_07900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_07910 PF02653 Branched-chain amino acid transport system / permease component NtRootC7_07920 PF00005 ABC transporter NtRootC7_07950 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_07980 PF01425 Amidase NtRootC7_08010 PF07687 Peptidase dimerisation domain NtRootC7_08010 PF01546 Peptidase family M20/M25/M40 NtRootC7_08020 PF02515 CoA-transferase family III NtRootC7_08030 PF01039 Carboxyl transferase domain NtRootC7_08070 PF00561 alpha/beta hydrolase fold NtRootC7_08080 PF12169 DNA polymerase III subunits gamma and tau domain III NtRootC7_08090 PF02223 Thymidylate kinase NtRootC7_08100 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootC7_08130 PF00300 Histidine phosphatase superfamily (branch 1) NtRootC7_08140 PF01895 PhoU domain NtRootC7_08150 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_08150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_08160 PF00072 Response regulator receiver domain NtRootC7_08160 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_08180 PF02559 CarD-like/TRCF domain NtRootC7_08190 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NtRootC7_08200 PF02542 YgbB family NtRootC7_08220 PF09190 DALR domain NtRootC7_08220 PF01406 tRNA synthetases class I (C) catalytic domain NtRootC7_08230 PF00588 SpoU rRNA Methylase family NtRootC7_08230 PF08032 RNA 2'-O ribose methyltransferase substrate binding NtRootC7_08250 PF00795 Carbon-nitrogen hydrolase NtRootC7_08260 PF00128 Alpha amylase, catalytic domain NtRootC7_08260 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NtRootC7_08290 PF11897 Protein of unknown function (DUF3417) NtRootC7_08290 PF00343 Carbohydrate phosphorylase NtRootC7_08300 PF11896 Domain of unknown function (DUF3416) NtRootC7_08310 PF00128 Alpha amylase, catalytic domain NtRootC7_08310 PF16657 Maltogenic Amylase, C-terminal domain NtRootC7_08320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NtRootC7_08320 PF02806 Alpha amylase, C-terminal all-beta domain NtRootC7_08320 PF00128 Alpha amylase, catalytic domain NtRootC7_08350 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_08360 PF00128 Alpha amylase, catalytic domain NtRootC7_08380 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_08380 PF14785 Maltose transport system permease protein MalF P2 domain NtRootC7_08390 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_08400 PF00128 Alpha amylase, catalytic domain NtRootC7_08400 PF02903 Alpha amylase, N-terminal ig-like domain NtRootC7_08410 PF02913 FAD linked oxidases, C-terminal domain NtRootC7_08410 PF01565 FAD binding domain NtRootC7_08440 PF07969 Amidohydrolase family NtRootC7_08450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC7_08450 PF00005 ABC transporter NtRootC7_08460 PF00005 ABC transporter NtRootC7_08460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC7_08470 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_08480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootC7_08490 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_08490 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootC7_08500 PF01979 Amidohydrolase family NtRootC7_08530 PF00728 Glycosyl hydrolase family 20, catalytic domain NtRootC7_08530 PF02838 Glycosyl hydrolase family 20, domain 2 NtRootC7_08540 PF17912 MalK OB fold domain NtRootC7_08540 PF00005 ABC transporter NtRootC7_08550 PF02358 Trehalose-phosphatase NtRootC7_08550 PF03636 Glycosyl hydrolase family 65, N-terminal domain NtRootC7_08550 PF03632 Glycosyl hydrolase family 65 central catalytic domain NtRootC7_08550 PF03633 Glycosyl hydrolase family 65, C-terminal domain NtRootC7_08560 PF00982 Glycosyltransferase family 20 NtRootC7_08580 PF13784 Fic/DOC family N-terminal NtRootC7_08580 PF02661 Fic/DOC family NtRootC7_08640 PF07724 AAA domain (Cdc48 subfamily) NtRootC7_08640 PF17871 AAA lid domain NtRootC7_08640 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootC7_08640 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC7_08640 PF02861 Clp amino terminal domain, pathogenicity island component NtRootC7_08660 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_08670 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_08680 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_08690 PF01547 Bacterial extracellular solute-binding protein NtRootC7_08710 PF08244 Glycosyl hydrolases family 32 C terminal NtRootC7_08710 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootC7_08750 PF00271 Helicase conserved C-terminal domain NtRootC7_08750 PF09382 RQC domain NtRootC7_08750 PF00270 DEAD/DEAH box helicase NtRootC7_08750 PF00570 HRDC domain NtRootC7_08750 PF16124 RecQ zinc-binding NtRootC7_08770 PF01256 Carbohydrate kinase NtRootC7_08790 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_08790 PF13192 Thioredoxin domain NtRootC7_08860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC7_08860 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC7_08860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC7_08870 PF01575 MaoC like domain NtRootC7_08880 PF00083 Sugar (and other) transporter NtRootC7_08890 PF00501 AMP-binding enzyme NtRootC7_08890 PF13193 AMP-binding enzyme C-terminal domain NtRootC7_08910 PF01266 FAD dependent oxidoreductase NtRootC7_08950 PF13520 Amino acid permease NtRootC7_08960 PF04371 Porphyromonas-type peptidyl-arginine deiminase NtRootC7_08970 PF00795 Carbon-nitrogen hydrolase NtRootC7_08980 PF00557 Metallopeptidase family M24 NtRootC7_09010 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_09030 PF07687 Peptidase dimerisation domain NtRootC7_09030 PF01546 Peptidase family M20/M25/M40 NtRootC7_09050 PF07690 Major Facilitator Superfamily NtRootC7_09060 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_09070 PF02347 Glycine cleavage system P-protein NtRootC7_09080 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC7_09080 PF01571 Aminomethyltransferase folate-binding domain NtRootC7_09090 PF01597 Glycine cleavage H-protein NtRootC7_09100 PF03315 Serine dehydratase beta chain NtRootC7_09100 PF03313 Serine dehydratase alpha chain NtRootC7_09110 PF01223 DNA/RNA non-specific endonuclease NtRootC7_09150 PF08021 Siderophore-interacting FAD-binding domain NtRootC7_09150 PF04954 Siderophore-interacting protein NtRootC7_09160 PF03167 Uracil DNA glycosylase superfamily NtRootC7_09190 PF00313 'Cold-shock' DNA-binding domain NtRootC7_09200 PF00118 TCP-1/cpn60 chaperonin family NtRootC7_09210 PF00075 RNase H NtRootC7_09230 PF00672 HAMP domain NtRootC7_09230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_09230 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_09240 PF00072 Response regulator receiver domain NtRootC7_09240 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_09250 PF01810 LysE type translocator NtRootC7_09260 PF03466 LysR substrate binding domain NtRootC7_09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_09280 PF00394 Multicopper oxidase NtRootC7_09280 PF07731 Multicopper oxidase NtRootC7_09280 PF07732 Multicopper oxidase NtRootC7_09330 PF00313 'Cold-shock' DNA-binding domain NtRootC7_09350 PF05977 Transmembrane secretion effector NtRootC7_09360 PF00266 Aminotransferase class-V NtRootC7_09370 PF01325 Iron dependent repressor, N-terminal DNA binding domain NtRootC7_09370 PF18357 Diphteria toxin repressor SH3 domain NtRootC7_09370 PF02742 Iron dependent repressor, metal binding and dimerisation domain NtRootC7_09380 PF04225 Opacity-associated protein A LysM-like domain NtRootC7_09380 PF01551 Peptidase family M23 NtRootC7_09390 PF08239 Bacterial SH3 domain NtRootC7_09390 PF00877 NlpC/P60 family NtRootC7_09390 PF01476 LysM domain NtRootC7_09420 PF12804 MobA-like NTP transferase domain NtRootC7_09440 PF00384 Molybdopterin oxidoreductase NtRootC7_09440 PF01568 Molydopterin dinucleotide binding domain NtRootC7_09450 PF02634 FdhD/NarQ family NtRootC7_09490 PF00005 ABC transporter NtRootC7_09500 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_09510 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC7_09540 PF12848 ABC transporter NtRootC7_09540 PF16326 ABC transporter C-terminal domain NtRootC7_09540 PF00005 ABC transporter NtRootC7_09550 PF00664 ABC transporter transmembrane region NtRootC7_09550 PF00005 ABC transporter NtRootC7_09560 PF00293 NUDIX domain NtRootC7_09630 PF00459 Inositol monophosphatase family NtRootC7_09740 PF00072 Response regulator receiver domain NtRootC7_09740 PF00196 Bacterial regulatory proteins, luxR family NtRootC7_09750 PF13361 UvrD-like helicase C-terminal domain NtRootC7_09750 PF00580 UvrD/REP helicase N-terminal domain NtRootC7_09770 PF08442 ATP-grasp domain NtRootC7_09770 PF00549 CoA-ligase NtRootC7_09780 PF02629 CoA binding domain NtRootC7_09780 PF00549 CoA-ligase NtRootC7_09800 PF00294 pfkB family carbohydrate kinase NtRootC7_09820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC7_09820 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC7_09820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC7_09830 PF00171 Aldehyde dehydrogenase family NtRootC7_09840 PF01261 Xylose isomerase-like TIM barrel NtRootC7_09850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_09850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_09860 PF01261 Xylose isomerase-like TIM barrel NtRootC7_09870 PF04962 KduI/IolB family NtRootC7_09880 PF07702 UTRA domain NtRootC7_09880 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_09900 PF02653 Branched-chain amino acid transport system / permease component NtRootC7_09910 PF00005 ABC transporter NtRootC7_09920 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_09930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_09930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_09950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_09950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_10040 PF00474 Sodium:solute symporter family NtRootC7_10050 PF07883 Cupin domain NtRootC7_10050 PF01381 Helix-turn-helix NtRootC7_10080 PF00491 Arginase family NtRootC7_10090 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC7_10090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC7_10090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC7_10100 PF07690 Major Facilitator Superfamily NtRootC7_10100 PF00083 Sugar (and other) transporter NtRootC7_10110 PF00753 Metallo-beta-lactamase superfamily NtRootC7_10120 PF03466 LysR substrate binding domain NtRootC7_10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_10140 PF07690 Major Facilitator Superfamily NtRootC7_10150 PF00664 ABC transporter transmembrane region NtRootC7_10150 PF00005 ABC transporter NtRootC7_10160 PF00664 ABC transporter transmembrane region NtRootC7_10160 PF00005 ABC transporter NtRootC7_10180 PF03932 CutC family NtRootC7_10230 PF12102 Domain of unknown function (DUF3578) NtRootC7_10230 PF07728 AAA domain (dynein-related subfamily) NtRootC7_10260 PF13426 PAS domain NtRootC7_10260 PF00672 HAMP domain NtRootC7_10260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_10260 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_10270 PF00072 Response regulator receiver domain NtRootC7_10270 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_10280 PF00037 4Fe-4S binding domain NtRootC7_10290 PF00171 Aldehyde dehydrogenase family NtRootC7_10310 PF00701 Dihydrodipicolinate synthetase family NtRootC7_10320 PF00378 Enoyl-CoA hydratase/isomerase NtRootC7_10330 PF02515 CoA-transferase family III NtRootC7_10340 PF17806 Sarcosine oxidase A3 domain NtRootC7_10340 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_10340 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC7_10340 PF01571 Aminomethyltransferase folate-binding domain NtRootC7_10350 PF00083 Sugar (and other) transporter NtRootC7_10360 PF07883 Cupin domain NtRootC7_10360 PF01381 Helix-turn-helix NtRootC7_10400 PF04055 Radical SAM superfamily NtRootC7_10400 PF06968 Biotin and Thiamin Synthesis associated domain NtRootC7_10420 PF05532 CsbD-like NtRootC7_10450 PF00107 Zinc-binding dehydrogenase NtRootC7_10450 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_10450 PF13823 Alcohol dehydrogenase GroES-associated NtRootC7_10480 PF13580 SIS domain NtRootC7_10500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NtRootC7_10530 PF02734 DAK2 domain NtRootC7_10530 PF02733 Dak1 domain NtRootC7_10540 PF02502 Ribose/Galactose Isomerase NtRootC7_10550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootC7_10550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootC7_10570 PF07690 Major Facilitator Superfamily NtRootC7_10580 PF00121 Triosephosphate isomerase NtRootC7_10610 PF00571 CBS domain NtRootC7_10620 PF00575 S1 RNA binding domain NtRootC7_10620 PF09371 Tex-like protein N-terminal domain NtRootC7_10620 PF16921 Tex protein YqgF-like domain NtRootC7_10620 PF17674 HHH domain NtRootC7_10660 PF00962 Adenosine/AMP deaminase NtRootC7_10670 PF00128 Alpha amylase, catalytic domain NtRootC7_10670 PF02903 Alpha amylase, N-terminal ig-like domain NtRootC7_10670 PF00395 S-layer homology domain NtRootC7_10680 PF00708 Acylphosphatase NtRootC7_10690 PF01850 PIN domain NtRootC7_10710 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_10730 PF00294 pfkB family carbohydrate kinase NtRootC7_10740 PF07729 FCD domain NtRootC7_10740 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_10750 PF07690 Major Facilitator Superfamily NtRootC7_10760 PF01156 Inosine-uridine preferring nucleoside hydrolase NtRootC7_10780 PF02449 Beta-galactosidase NtRootC7_10780 PF08532 Beta-galactosidase trimerisation domain NtRootC7_10780 PF08533 Beta-galactosidase C-terminal domain NtRootC7_10790 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_10800 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_10810 PF01547 Bacterial extracellular solute-binding protein NtRootC7_10910 PF14310 Fibronectin type III-like domain NtRootC7_10910 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootC7_10910 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootC7_10920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_10920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_10950 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_10960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_10960 PF03466 LysR substrate binding domain NtRootC7_10970 PF00795 Carbon-nitrogen hydrolase NtRootC7_10990 PF07690 Major Facilitator Superfamily NtRootC7_11000 PF03741 Integral membrane protein TerC family NtRootC7_11060 PF01022 Bacterial regulatory protein, arsR family NtRootC7_11090 PF01047 MarR family NtRootC7_11100 PF00892 EamA-like transporter family NtRootC7_11120 PF00144 Beta-lactamase NtRootC7_11230 PF00313 'Cold-shock' DNA-binding domain NtRootC7_11280 PF13520 Amino acid permease NtRootC7_11310 PF01047 MarR family NtRootC7_11350 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NtRootC7_11350 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NtRootC7_11350 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NtRootC7_11360 PF13439 Glycosyltransferase Family 4 NtRootC7_11360 PF00534 Glycosyl transferases group 1 NtRootC7_11370 PF13411 MerR HTH family regulatory protein NtRootC7_11380 PF00011 Hsp20/alpha crystallin family NtRootC7_11390 PF00684 DnaJ central domain NtRootC7_11390 PF01556 DnaJ C terminal domain NtRootC7_11390 PF00226 DnaJ domain NtRootC7_11430 PF00551 Formyl transferase NtRootC7_11440 PF07690 Major Facilitator Superfamily NtRootC7_11450 PF01380 SIS domain NtRootC7_11490 PF01808 AICARFT/IMPCHase bienzyme NtRootC7_11490 PF02142 MGS-like domain NtRootC7_11510 PF03971 Monomeric isocitrate dehydrogenase NtRootC7_11520 PF01266 FAD dependent oxidoreductase NtRootC7_11530 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_11540 PF00005 ABC transporter NtRootC7_11570 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_11570 PF07702 UTRA domain NtRootC7_11580 PF13419 Haloacid dehalogenase-like hydrolase NtRootC7_11600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_11600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_11610 PF00005 ABC transporter NtRootC7_11630 PF13407 Periplasmic binding protein domain NtRootC7_11640 PF02653 Branched-chain amino acid transport system / permease component NtRootC7_11650 PF00005 ABC transporter NtRootC7_11660 PF00480 ROK family NtRootC7_11660 PF01047 MarR family NtRootC7_11670 PF00795 Carbon-nitrogen hydrolase NtRootC7_11690 PF01168 Alanine racemase, N-terminal domain NtRootC7_11690 PF00842 Alanine racemase, C-terminal domain NtRootC7_11710 PF13520 Amino acid permease NtRootC7_11720 PF01593 Flavin containing amine oxidoreductase NtRootC7_11720 PF02027 RolB/RolC glucosidase family NtRootC7_11730 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootC7_11740 PF13649 Methyltransferase domain NtRootC7_11750 PF00551 Formyl transferase NtRootC7_11760 PF00464 Serine hydroxymethyltransferase NtRootC7_11770 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NtRootC7_11770 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NtRootC7_11780 PF00230 Major intrinsic protein NtRootC7_11790 PF00005 ABC transporter NtRootC7_11830 PF03372 Endonuclease/Exonuclease/phosphatase family NtRootC7_11840 PF00579 tRNA synthetases class I (W and Y) NtRootC7_11910 PF13085 2Fe-2S iron-sulfur cluster binding domain NtRootC7_11920 PF00890 FAD binding domain NtRootC7_11920 PF02910 Fumarate reductase flavoprotein C-term NtRootC7_11940 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NtRootC7_11950 PF01050 Mannose-6-phosphate isomerase NtRootC7_11950 PF00483 Nucleotidyl transferase NtRootC7_11960 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootC7_11960 PF01546 Peptidase family M20/M25/M40 NtRootC7_11970 PF01047 MarR family NtRootC7_11980 PF02566 OsmC-like protein NtRootC7_11990 PF00107 Zinc-binding dehydrogenase NtRootC7_11990 PF16884 N-terminal domain of oxidoreductase NtRootC7_12000 PF02608 ABC transporter substrate-binding protein PnrA-like NtRootC7_12010 PF00005 ABC transporter NtRootC7_12020 PF02653 Branched-chain amino acid transport system / permease component NtRootC7_12030 PF02653 Branched-chain amino acid transport system / permease component NtRootC7_12040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootC7_12050 PF02885 Glycosyl transferase family, helical bundle domain NtRootC7_12050 PF00591 Glycosyl transferase family, a/b domain NtRootC7_12050 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NtRootC7_12070 PF09335 SNARE associated Golgi protein NtRootC7_12080 PF00962 Adenosine/AMP deaminase NtRootC7_12090 PF03819 MazG nucleotide pyrophosphohydrolase domain NtRootC7_12100 PF00113 Enolase, C-terminal TIM barrel domain NtRootC7_12100 PF03952 Enolase, N-terminal domain NtRootC7_12130 PF02541 Ppx/GppA phosphatase family NtRootC7_12140 PF00082 Subtilase family NtRootC7_12150 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_12160 PF00583 Acetyltransferase (GNAT) family NtRootC7_12190 PF00672 HAMP domain NtRootC7_12190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_12190 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_12200 PF00072 Response regulator receiver domain NtRootC7_12200 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_12230 PF00005 ABC transporter NtRootC7_12230 PF02687 FtsX-like permease family NtRootC7_12230 PF12704 MacB-like periplasmic core domain NtRootC7_12240 PF00005 ABC transporter NtRootC7_12240 PF12704 MacB-like periplasmic core domain NtRootC7_12240 PF02687 FtsX-like permease family NtRootC7_12270 PF00005 ABC transporter NtRootC7_12280 PF12399 Branched-chain amino acid ATP-binding cassette transporter NtRootC7_12280 PF00005 ABC transporter NtRootC7_12290 PF11862 Domain of unknown function (DUF3382) NtRootC7_12290 PF02653 Branched-chain amino acid transport system / permease component NtRootC7_12300 PF02653 Branched-chain amino acid transport system / permease component NtRootC7_12320 PF00108 Thiolase, N-terminal domain NtRootC7_12320 PF02803 Thiolase, C-terminal domain NtRootC7_12330 PF00288 GHMP kinases N terminal domain NtRootC7_12330 PF08544 GHMP kinases C terminal NtRootC7_12330 PF10509 Galactokinase galactose-binding signature NtRootC7_12340 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NtRootC7_12340 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NtRootC7_12350 PF01263 Aldose 1-epimerase NtRootC7_12360 PF01594 AI-2E family transporter NtRootC7_12370 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC7_12370 PF13291 ACT domain NtRootC7_12380 PF01694 Rhomboid family NtRootC7_12390 PF01272 Transcription elongation factor, GreA/GreB, C-term NtRootC7_12390 PF03449 Transcription elongation factor, N-terminal NtRootC7_12410 PF02585 GlcNAc-PI de-N-acetylase NtRootC7_12430 PF03006 Haemolysin-III related NtRootC7_12440 PF01255 Putative undecaprenyl diphosphate synthase NtRootC7_12450 PF02562 PhoH-like protein NtRootC7_12450 PF13638 PIN domain NtRootC7_12500 PF07690 Major Facilitator Superfamily NtRootC7_12520 PF00206 Lyase NtRootC7_12520 PF10415 Fumarase C C-terminus NtRootC7_12530 PF00484 Carbonic anhydrase NtRootC7_12550 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NtRootC7_12570 PF01238 Phosphomannose isomerase type I NtRootC7_12590 PF00731 AIR carboxylase NtRootC7_12600 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NtRootC7_12600 PF02222 ATP-grasp domain NtRootC7_12630 PF02467 Transcription factor WhiB NtRootC7_12640 PF00535 Glycosyl transferase family 2 NtRootC7_12640 PF00534 Glycosyl transferases group 1 NtRootC7_12700 PF05221 S-adenosyl-L-homocysteine hydrolase NtRootC7_12700 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NtRootC7_12710 PF17964 Bacterial Ig domain NtRootC7_12710 PF03734 L,D-transpeptidase catalytic domain NtRootC7_12720 PF00805 Pentapeptide repeats (8 copies) NtRootC7_12760 PF00501 AMP-binding enzyme NtRootC7_12770 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NtRootC7_12770 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase NtRootC7_12780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NtRootC7_12790 PF00171 Aldehyde dehydrogenase family NtRootC7_12820 PF07726 ATPase family associated with various cellular activities (AAA) NtRootC7_12820 PF17863 AAA lid domain NtRootC7_12830 PF01026 TatD related DNase NtRootC7_12840 PF06737 Transglycosylase-like domain NtRootC7_12840 PF07501 G5 domain NtRootC7_12840 PF03990 G5-linked-Ubiquitin-like domain NtRootC7_12850 PF00398 Ribosomal RNA adenine dimethylase NtRootC7_12860 PF08544 GHMP kinases C terminal NtRootC7_12860 PF00288 GHMP kinases N terminal domain NtRootC7_12870 PF16326 ABC transporter C-terminal domain NtRootC7_12870 PF00005 ABC transporter NtRootC7_12870 PF12848 ABC transporter NtRootC7_12890 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_12900 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootC7_12900 PF12804 MobA-like NTP transferase domain NtRootC7_12910 PF14572 Phosphoribosyl synthetase-associated domain NtRootC7_12910 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NtRootC7_12920 PF01386 Ribosomal L25p family NtRootC7_12920 PF14693 Ribosomal protein TL5, C-terminal domain NtRootC7_12930 PF01195 Peptidyl-tRNA hydrolase NtRootC7_12950 PF00196 Bacterial regulatory proteins, luxR family NtRootC7_12950 PF00072 Response regulator receiver domain NtRootC7_12970 PF00266 Aminotransferase class-V NtRootC7_12980 PF01592 NifU-like N terminal domain NtRootC7_12990 PF06965 Na+/H+ antiporter 1 NtRootC7_13020 PF11066 Protein of unknown function (DUF2867) NtRootC7_13020 PF13460 NAD(P)H-binding NtRootC7_13030 PF02559 CarD-like/TRCF domain NtRootC7_13030 PF00270 DEAD/DEAH box helicase NtRootC7_13030 PF00271 Helicase conserved C-terminal domain NtRootC7_13030 PF03461 TRCF domain NtRootC7_13030 PF17757 UvrB interaction domain NtRootC7_13040 PF04307 LexA-binding, inner membrane-associated putative hydrolase NtRootC7_13060 PF01791 DeoC/LacD family aldolase NtRootC7_13080 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_13080 PF18113 Rubredoxin binding C-terminal domain NtRootC7_13150 PF05199 GMC oxidoreductase NtRootC7_13200 PF00717 Peptidase S24-like NtRootC7_13210 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_13220 PF00083 Sugar (and other) transporter NtRootC7_13240 PF13438 Domain of unknown function (DUF4113) NtRootC7_13240 PF00817 impB/mucB/samB family NtRootC7_13240 PF11799 impB/mucB/samB family C-terminal domain NtRootC7_13240 PF11798 IMS family HHH motif NtRootC7_13260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NtRootC7_13260 PF02602 Uroporphyrinogen-III synthase HemD NtRootC7_13270 PF04324 BFD-like [2Fe-2S] binding domain NtRootC7_13270 PF18267 Rubredoxin NAD+ reductase C-terminal domain NtRootC7_13270 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_13270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NtRootC7_13270 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NtRootC7_13290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootC7_13290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootC7_13290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootC7_13290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootC7_13300 PF08244 Glycosyl hydrolases family 32 C terminal NtRootC7_13300 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootC7_13310 PF02435 Levansucrase/Invertase NtRootC7_13320 PF01048 Phosphorylase superfamily NtRootC7_13330 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_13330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootC7_13350 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_13350 PF14759 Reductase C-terminal NtRootC7_13360 PF01568 Molydopterin dinucleotide binding domain NtRootC7_13360 PF00384 Molybdopterin oxidoreductase NtRootC7_13360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NtRootC7_13370 PF07690 Major Facilitator Superfamily NtRootC7_13380 PF07690 Major Facilitator Superfamily NtRootC7_13380 PF00083 Sugar (and other) transporter NtRootC7_13390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootC7_13390 PF00364 Biotin-requiring enzyme NtRootC7_13390 PF00289 Biotin carboxylase, N-terminal domain NtRootC7_13390 PF02785 Biotin carboxylase C-terminal domain NtRootC7_13400 PF02545 Maf-like protein NtRootC7_13410 PF03176 MMPL family NtRootC7_13420 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_13430 PF01906 Putative heavy-metal-binding NtRootC7_13440 PF00375 Sodium:dicarboxylate symporter family NtRootC7_13470 PF01039 Carboxyl transferase domain NtRootC7_13490 PF02237 Biotin protein ligase C terminal domain NtRootC7_13490 PF08279 HTH domain NtRootC7_13490 PF03099 Biotin/lipoate A/B protein ligase family NtRootC7_13510 PF00211 Adenylate and Guanylate cyclase catalytic domain NtRootC7_13510 PF16701 Adenylate cyclase regulatory domain NtRootC7_13540 PF07726 ATPase family associated with various cellular activities (AAA) NtRootC7_13540 PF17863 AAA lid domain NtRootC7_13600 PF13191 AAA ATPase domain NtRootC7_13600 PF00069 Protein kinase domain NtRootC7_13620 PF01580 FtsK/SpoIIIE family NtRootC7_13620 PF12538 DNA transporter NtRootC7_13630 PF12826 Helix-hairpin-helix motif NtRootC7_13630 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NtRootC7_13630 PF01653 NAD-dependent DNA ligase adenylation domain NtRootC7_13630 PF00533 BRCA1 C Terminus (BRCT) domain NtRootC7_13630 PF03120 NAD-dependent DNA ligase OB-fold domain NtRootC7_13640 PF00459 Inositol monophosphatase family NtRootC7_13660 PF00296 Luciferase-like monooxygenase NtRootC7_13700 PF00072 Response regulator receiver domain NtRootC7_13720 PF03600 Citrate transporter NtRootC7_13730 PF03816 Cell envelope-related transcriptional attenuator domain NtRootC7_13750 PF02686 Glu-tRNAGln amidotransferase C subunit NtRootC7_13760 PF01425 Amidase NtRootC7_13770 PF02934 GatB/GatE catalytic domain NtRootC7_13770 PF02637 GatB domain NtRootC7_13790 PF03781 Sulfatase-modifying factor enzyme 1 NtRootC7_13800 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_13810 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_13830 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_13850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_13850 PF03466 LysR substrate binding domain NtRootC7_13860 PF00107 Zinc-binding dehydrogenase NtRootC7_13860 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_13870 PF00155 Aminotransferase class I and II NtRootC7_13890 PF01979 Amidohydrolase family NtRootC7_13900 PF12905 Endo-alpha-N-acetylgalactosaminidase NtRootC7_13900 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase NtRootC7_13900 PF17451 Glycosyl hydrolase 101 beta sandwich domain NtRootC7_13900 PF18080 Galactose mutarotase-like fold domain NtRootC7_13900 PF17974 Galactose-binding domain-like NtRootC7_13900 PF08305 NPCBM/NEW2 domain NtRootC7_13910 PF01380 SIS domain NtRootC7_13930 PF00294 pfkB family carbohydrate kinase NtRootC7_13940 PF01116 Fructose-bisphosphate aldolase class-II NtRootC7_13950 PF00455 DeoR C terminal sensor domain NtRootC7_13950 PF08220 DeoR-like helix-turn-helix domain NtRootC7_13960 PF00300 Histidine phosphatase superfamily (branch 1) NtRootC7_13990 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootC7_14000 PF00561 alpha/beta hydrolase fold NtRootC7_14070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootC7_14070 PF03129 Anticodon binding domain NtRootC7_14090 PF01565 FAD binding domain NtRootC7_14090 PF08031 Berberine and berberine like NtRootC7_14110 PF03649 Uncharacterised protein family (UPF0014) NtRootC7_14120 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_14120 PF00672 HAMP domain NtRootC7_14130 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_14130 PF00072 Response regulator receiver domain NtRootC7_14140 PF09335 SNARE associated Golgi protein NtRootC7_14150 PF01569 PAP2 superfamily NtRootC7_14170 PF00005 ABC transporter NtRootC7_14190 PF07730 Histidine kinase NtRootC7_14190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_14200 PF00072 Response regulator receiver domain NtRootC7_14200 PF00196 Bacterial regulatory proteins, luxR family NtRootC7_14210 PF01207 Dihydrouridine synthase (Dus) NtRootC7_14220 PF13286 Phosphohydrolase-associated domain NtRootC7_14220 PF01966 HD domain NtRootC7_14230 PF01807 CHC2 zinc finger NtRootC7_14230 PF10410 DnaB-helicase binding domain of primase NtRootC7_14230 PF08278 DNA primase DnaG DnaB-binding NtRootC7_14230 PF13662 Toprim domain NtRootC7_14230 PF08275 DNA primase catalytic core, N-terminal domain NtRootC7_14250 PF00756 Putative esterase NtRootC7_14260 PF09924 Uncharacterised conserved protein (DUF2156) NtRootC7_14280 PF07690 Major Facilitator Superfamily NtRootC7_14300 PF01066 CDP-alcohol phosphatidyltransferase NtRootC7_14320 PF08323 Starch synthase catalytic domain NtRootC7_14330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC7_14330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC7_14330 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC7_14340 PF01551 Peptidase family M23 NtRootC7_14350 PF00318 Ribosomal protein S2 NtRootC7_14360 PF00889 Elongation factor TS NtRootC7_14370 PF00696 Amino acid kinase family NtRootC7_14380 PF01765 Ribosome recycling factor NtRootC7_14420 PF00474 Sodium:solute symporter family NtRootC7_14440 PF00072 Response regulator receiver domain NtRootC7_14440 PF04397 LytTr DNA-binding domain NtRootC7_14450 PF06580 Histidine kinase NtRootC7_14450 PF07694 5TMR of 5TMR-LYT NtRootC7_14470 PF00474 Sodium:solute symporter family NtRootC7_14480 PF14716 Helix-hairpin-helix domain NtRootC7_14480 PF14791 DNA polymerase beta thumb NtRootC7_14480 PF02811 PHP domain NtRootC7_14520 PF01037 Lrp/AsnC ligand binding domain NtRootC7_14530 PF00676 Dehydrogenase E1 component NtRootC7_14540 PF02779 Transketolase, pyrimidine binding domain NtRootC7_14540 PF02780 Transketolase, C-terminal domain NtRootC7_14550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootC7_14550 PF00364 Biotin-requiring enzyme NtRootC7_14550 PF02817 e3 binding domain NtRootC7_14560 PF16363 GDP-mannose 4,6 dehydratase NtRootC7_14590 PF01039 Carboxyl transferase domain NtRootC7_14600 PF02785 Biotin carboxylase C-terminal domain NtRootC7_14600 PF00289 Biotin carboxylase, N-terminal domain NtRootC7_14600 PF00364 Biotin-requiring enzyme NtRootC7_14600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootC7_14610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC7_14610 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC7_14610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC7_14620 PF01144 Coenzyme A transferase NtRootC7_14630 PF01144 Coenzyme A transferase NtRootC7_14650 PF03328 HpcH/HpaI aldolase/citrate lyase family NtRootC7_14660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_14660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_14690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_14690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_14700 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_14710 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_14720 PF01547 Bacterial extracellular solute-binding protein NtRootC7_14730 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_14750 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NtRootC7_14750 PF13288 DXP reductoisomerase C-terminal domain NtRootC7_14750 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NtRootC7_14760 PF17820 PDZ domain NtRootC7_14760 PF02163 Peptidase family M50 NtRootC7_14780 PF04551 GcpE protein NtRootC7_14810 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_14830 PF00005 ABC transporter NtRootC7_14850 PF03129 Anticodon binding domain NtRootC7_14850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootC7_14850 PF04073 Aminoacyl-tRNA editing domain NtRootC7_14860 PF01925 Sulfite exporter TauE/SafE NtRootC7_14870 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NtRootC7_14900 PF17384 RimP C-terminal SH3 domain NtRootC7_14900 PF02576 RimP N-terminal domain NtRootC7_14910 PF13184 NusA-like KH domain NtRootC7_14910 PF08529 NusA N-terminal domain NtRootC7_14930 PF00009 Elongation factor Tu GTP binding domain NtRootC7_14930 PF11987 Translation-initiation factor 2 NtRootC7_14930 PF04760 Translation initiation factor IF-2, N-terminal region NtRootC7_14940 PF02033 Ribosome-binding factor A NtRootC7_14950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootC7_14960 PF00155 Aminotransferase class I and II NtRootC7_14970 PF16198 tRNA pseudouridylate synthase B C-terminal domain NtRootC7_14970 PF09142 tRNA Pseudouridine synthase II, C terminal NtRootC7_14970 PF01509 TruB family pseudouridylate synthase (N terminal domain) NtRootC7_15000 PF01687 Riboflavin kinase NtRootC7_15000 PF06574 FAD synthetase NtRootC7_15010 PF00312 Ribosomal protein S15 NtRootC7_15020 PF00013 KH domain NtRootC7_15020 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NtRootC7_15020 PF01138 3' exoribonuclease family, domain 1 NtRootC7_15020 PF00575 S1 RNA binding domain NtRootC7_15030 PF00675 Insulinase (Peptidase family M16) NtRootC7_15030 PF05193 Peptidase M16 inactive domain NtRootC7_15060 PF06463 Molybdenum Cofactor Synthesis C NtRootC7_15060 PF04055 Radical SAM superfamily NtRootC7_15070 PF00072 Response regulator receiver domain NtRootC7_15070 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_15080 PF00672 HAMP domain NtRootC7_15080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_15080 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_15100 PF03453 MoeA N-terminal region (domain I and II) NtRootC7_15100 PF03454 MoeA C-terminal region (domain IV) NtRootC7_15100 PF00994 Probable molybdopterin binding domain NtRootC7_15110 PF01967 MoaC family NtRootC7_15120 PF00994 Probable molybdopterin binding domain NtRootC7_15130 PF02391 MoaE protein NtRootC7_15140 PF01113 Dihydrodipicolinate reductase, N-terminus NtRootC7_15140 PF05173 Dihydrodipicolinate reductase, C-terminus NtRootC7_15180 PF00701 Dihydrodipicolinate synthetase family NtRootC7_15190 PF12706 Beta-lactamase superfamily domain NtRootC7_15190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NtRootC7_15190 PF17770 Ribonuclease J C-terminal domain NtRootC7_15200 PF17854 FtsK alpha domain NtRootC7_15200 PF09397 Ftsk gamma domain NtRootC7_15200 PF01580 FtsK/SpoIIIE family NtRootC7_15210 PF01066 CDP-alcohol phosphatidyltransferase NtRootC7_15220 PF02464 Competence-damaged protein NtRootC7_15220 PF18146 Damage-inducible protein CinA KH domain NtRootC7_15220 PF00994 Probable molybdopterin binding domain NtRootC7_15260 PF00154 recA bacterial DNA recombination protein NtRootC7_15270 PF02631 RecX family NtRootC7_15280 PF04055 Radical SAM superfamily NtRootC7_15280 PF01938 TRAM domain NtRootC7_15280 PF00919 Uncharacterized protein family UPF0004 NtRootC7_15300 PF01678 Diaminopimelate epimerase NtRootC7_15310 PF05175 Methyltransferase small domain NtRootC7_15320 PF16360 GTP-binding GTPase Middle Region NtRootC7_15320 PF13167 GTP-binding GTPase N-terminal NtRootC7_15320 PF01926 50S ribosome-binding GTPase NtRootC7_15330 PF13307 Helicase C-terminal domain NtRootC7_15340 PF01726 LexA DNA binding domain NtRootC7_15340 PF00717 Peptidase S24-like NtRootC7_15350 PF01476 LysM domain NtRootC7_15370 PF00155 Aminotransferase class I and II NtRootC7_15380 PF00475 Imidazoleglycerol-phosphate dehydratase NtRootC7_15390 PF00117 Glutamine amidotransferase class-I NtRootC7_15410 PF00977 Histidine biosynthesis protein NtRootC7_15460 PF00707 Translation initiation factor IF-3, C-terminal domain NtRootC7_15460 PF05198 Translation initiation factor IF-3, N-terminal domain NtRootC7_15470 PF01632 Ribosomal protein L35 NtRootC7_15480 PF00453 Ribosomal protein L20 NtRootC7_15490 PF00588 SpoU rRNA Methylase family NtRootC7_15490 PF08032 RNA 2'-O ribose methyltransferase substrate binding NtRootC7_15500 PF01545 Cation efflux family NtRootC7_15500 PF16916 Dimerisation domain of Zinc Transporter NtRootC7_15510 PF07690 Major Facilitator Superfamily NtRootC7_15520 PF00293 NUDIX domain NtRootC7_15530 PF04055 Radical SAM superfamily NtRootC7_15540 PF01470 Pyroglutamyl peptidase NtRootC7_15580 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NtRootC7_15580 PF01409 tRNA synthetases class II core domain (F) NtRootC7_15590 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NtRootC7_15590 PF01588 Putative tRNA binding domain NtRootC7_15590 PF03483 B3/4 domain NtRootC7_15590 PF03484 tRNA synthetase B5 domain NtRootC7_15590 PF03147 Ferredoxin-fold anticodon binding domain NtRootC7_15600 PF00089 Trypsin NtRootC7_15640 PF00501 AMP-binding enzyme NtRootC7_15640 PF00550 Phosphopantetheine attachment site NtRootC7_15640 PF07993 Male sterility protein NtRootC7_15640 PF00668 Condensation domain NtRootC7_15640 PF13193 AMP-binding enzyme C-terminal domain NtRootC7_15650 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_15650 PF00107 Zinc-binding dehydrogenase NtRootC7_15670 PF01118 Semialdehyde dehydrogenase, NAD binding domain NtRootC7_15670 PF02774 Semialdehyde dehydrogenase, dimerisation domain NtRootC7_15680 PF01960 ArgJ family NtRootC7_15690 PF00696 Amino acid kinase family NtRootC7_15700 PF00202 Aminotransferase class-III NtRootC7_15710 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NtRootC7_15710 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NtRootC7_15720 PF02863 Arginine repressor, C-terminal domain NtRootC7_15720 PF01316 Arginine repressor, DNA binding domain NtRootC7_15730 PF00764 Arginosuccinate synthase NtRootC7_15740 PF00206 Lyase NtRootC7_15740 PF14698 Argininosuccinate lyase C-terminal NtRootC7_15760 PF00730 HhH-GPD superfamily base excision DNA repair protein NtRootC7_15760 PF02805 Metal binding domain of Ada NtRootC7_15760 PF06029 AlkA N-terminal domain NtRootC7_15760 PF12833 Helix-turn-helix domain NtRootC7_15770 PF02245 Methylpurine-DNA glycosylase (MPG) NtRootC7_15790 PF00579 tRNA synthetases class I (W and Y) NtRootC7_15830 PF13419 Haloacid dehalogenase-like hydrolase NtRootC7_15850 PF01728 FtsJ-like methyltransferase NtRootC7_15850 PF01479 S4 domain NtRootC7_15860 PF01513 ATP-NAD kinase NtRootC7_15870 PF02463 RecF/RecN/SMC N terminal domain NtRootC7_15880 PF06418 CTP synthase N-terminus NtRootC7_15880 PF00117 Glutamine amidotransferase class-I NtRootC7_15900 PF00589 Phage integrase family NtRootC7_15900 PF02899 Phage integrase, N-terminal SAM-like domain NtRootC7_15940 PF00285 Citrate synthase, C-terminal domain NtRootC7_15960 PF03972 MmgE/PrpD family NtRootC7_15970 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_15970 PF07729 FCD domain NtRootC7_15980 PF00072 Response regulator receiver domain NtRootC7_15980 PF04703 FaeA-like protein NtRootC7_15990 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NtRootC7_15990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_15990 PF17203 Single cache domain 3 NtRootC7_15990 PF00989 PAS fold NtRootC7_16000 PF00375 Sodium:dicarboxylate symporter family NtRootC7_16010 PF13614 AAA domain NtRootC7_16020 PF02616 Segregation and condensation protein ScpA NtRootC7_16030 PF04079 Segregation and condensation complex subunit ScpB NtRootC7_16040 PF00849 RNA pseudouridylate synthase NtRootC7_16040 PF01479 S4 domain NtRootC7_16050 PF02153 Prephenate dehydrogenase NtRootC7_16060 PF02224 Cytidylate kinase NtRootC7_16080 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NtRootC7_16080 PF01926 50S ribosome-binding GTPase NtRootC7_16090 PF01047 MarR family NtRootC7_16100 PF07690 Major Facilitator Superfamily NtRootC7_16120 PF01597 Glycine cleavage H-protein NtRootC7_16130 PF00498 FHA domain NtRootC7_16140 PF00376 MerR family regulatory protein NtRootC7_16150 PF02577 Bifunctional nuclease NtRootC7_16160 PF13411 MerR HTH family regulatory protein NtRootC7_16170 PF13614 AAA domain NtRootC7_16180 PF00289 Biotin carboxylase, N-terminal domain NtRootC7_16180 PF00364 Biotin-requiring enzyme NtRootC7_16180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootC7_16180 PF00682 HMGL-like NtRootC7_16180 PF02436 Conserved carboxylase domain NtRootC7_16180 PF02785 Biotin carboxylase C-terminal domain NtRootC7_16190 PF00501 AMP-binding enzyme NtRootC7_16200 PF00480 ROK family NtRootC7_16220 PF12146 Serine aminopeptidase, S33 NtRootC7_16250 PF01474 Class-II DAHP synthetase family NtRootC7_16260 PF00069 Protein kinase domain NtRootC7_16260 PF03793 PASTA domain NtRootC7_16270 PF05257 CHAP domain NtRootC7_16270 PF01476 LysM domain NtRootC7_16300 PF00348 Polyprenyl synthetase NtRootC7_16330 PF00817 impB/mucB/samB family NtRootC7_16330 PF11799 impB/mucB/samB family C-terminal domain NtRootC7_16350 PF02381 MraZ protein, putative antitoxin-like NtRootC7_16360 PF01795 MraW methylase family NtRootC7_16380 PF00905 Penicillin binding protein transpeptidase domain NtRootC7_16380 PF03717 Penicillin-binding Protein dimerisation domain NtRootC7_16390 PF02875 Mur ligase family, glutamate ligase domain NtRootC7_16390 PF01225 Mur ligase family, catalytic domain NtRootC7_16390 PF08245 Mur ligase middle domain NtRootC7_16400 PF02875 Mur ligase family, glutamate ligase domain NtRootC7_16400 PF01225 Mur ligase family, catalytic domain NtRootC7_16400 PF08245 Mur ligase middle domain NtRootC7_16410 PF00953 Glycosyl transferase family 4 NtRootC7_16420 PF08245 Mur ligase middle domain NtRootC7_16420 PF02875 Mur ligase family, glutamate ligase domain NtRootC7_16430 PF01098 Cell cycle protein NtRootC7_16440 PF04101 Glycosyltransferase family 28 C-terminal domain NtRootC7_16440 PF03033 Glycosyltransferase family 28 N-terminal domain NtRootC7_16450 PF02875 Mur ligase family, glutamate ligase domain NtRootC7_16450 PF01225 Mur ligase family, catalytic domain NtRootC7_16450 PF08245 Mur ligase middle domain NtRootC7_16470 PF12327 FtsZ family, C-terminal domain NtRootC7_16470 PF00091 Tubulin/FtsZ family, GTPase domain NtRootC7_16480 PF02578 Multi-copper polyphenol oxidoreductase laccase NtRootC7_16490 PF01168 Alanine racemase, N-terminal domain NtRootC7_16500 PF04472 Cell division protein SepF NtRootC7_16520 PF05103 DivIVA protein NtRootC7_16530 PF01252 Signal peptidase (SPase) II NtRootC7_16540 PF00849 RNA pseudouridylate synthase NtRootC7_16550 PF02811 PHP domain NtRootC7_16550 PF14579 Helix-hairpin-helix motif NtRootC7_16550 PF07733 Bacterial DNA polymerase III alpha NTPase domain NtRootC7_16550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NtRootC7_16580 PF00815 Histidinol dehydrogenase NtRootC7_16590 PF03477 ATP cone domain NtRootC7_16610 PF00480 ROK family NtRootC7_16620 PF00557 Metallopeptidase family M24 NtRootC7_16640 PF02548 Ketopantoate hydroxymethyltransferase NtRootC7_16650 PF00120 Glutamine synthetase, catalytic domain NtRootC7_16650 PF03951 Glutamine synthetase, beta-Grasp domain NtRootC7_16660 PF08335 GlnD PII-uridylyltransferase NtRootC7_16660 PF03710 Glutamate-ammonia ligase adenylyltransferase NtRootC7_16670 PF00884 Sulfatase NtRootC7_16670 PF16347 Domain of unknown function (DUF4976) NtRootC7_16700 PF00120 Glutamine synthetase, catalytic domain NtRootC7_16700 PF03951 Glutamine synthetase, beta-Grasp domain NtRootC7_16730 PF04055 Radical SAM superfamily NtRootC7_16730 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NtRootC7_16740 PF03099 Biotin/lipoate A/B protein ligase family NtRootC7_16750 PF00069 Protein kinase domain NtRootC7_16750 PF13360 PQQ-like domain NtRootC7_16770 PF07676 WD40-like Beta Propeller Repeat NtRootC7_16770 PF03572 Peptidase family S41 NtRootC7_16770 PF14684 Tricorn protease C1 domain NtRootC7_16770 PF14685 Tricorn protease PDZ domain NtRootC7_16780 PF02566 OsmC-like protein NtRootC7_16810 PF00364 Biotin-requiring enzyme NtRootC7_16810 PF02817 e3 binding domain NtRootC7_16810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootC7_16820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootC7_16820 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_16830 PF00883 Cytosol aminopeptidase family, catalytic domain NtRootC7_16830 PF02789 Cytosol aminopeptidase family, N-terminal domain NtRootC7_16870 PF04542 Sigma-70 region 2 NtRootC7_16870 PF00140 Sigma-70 factor, region 1.2 NtRootC7_16870 PF04539 Sigma-70 region 3 NtRootC7_16870 PF04545 Sigma-70, region 4 NtRootC7_16890 PF00204 DNA gyrase B NtRootC7_16890 PF00986 DNA gyrase B subunit, carboxyl terminus NtRootC7_16890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_16890 PF01751 Toprim domain NtRootC7_16920 PF03965 Penicillinase repressor NtRootC7_16930 PF01654 Cytochrome bd terminal oxidase subunit I NtRootC7_16940 PF02322 Cytochrome bd terminal oxidase subunit II NtRootC7_16950 PF00664 ABC transporter transmembrane region NtRootC7_16950 PF00005 ABC transporter NtRootC7_16990 PF03989 DNA gyrase C-terminal domain, beta-propeller NtRootC7_16990 PF00521 DNA gyrase/topoisomerase IV, subunit A NtRootC7_17000 PF13607 Succinyl-CoA ligase like flavodoxin domain NtRootC7_17000 PF00583 Acetyltransferase (GNAT) family NtRootC7_17000 PF13380 CoA binding domain NtRootC7_17030 PF00265 Thymidine kinase NtRootC7_17040 PF11268 Protein of unknown function (DUF3071) NtRootC7_17080 PF00692 dUTPase NtRootC7_17120 PF02080 TrkA-C domain NtRootC7_17120 PF02254 TrkA-N domain NtRootC7_17130 PF02080 TrkA-C domain NtRootC7_17130 PF02254 TrkA-N domain NtRootC7_17150 PF13520 Amino acid permease NtRootC7_17160 PF05958 tRNA (Uracil-5-)-methyltransferase NtRootC7_17160 PF01938 TRAM domain NtRootC7_17170 PF00330 Aconitase family (aconitate hydratase) NtRootC7_17170 PF00694 Aconitase C-terminal domain NtRootC7_17180 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NtRootC7_17180 PF02779 Transketolase, pyrimidine binding domain NtRootC7_17180 PF02780 Transketolase, C-terminal domain NtRootC7_17220 PF00248 Aldo/keto reductase family NtRootC7_17230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootC7_17230 PF00378 Enoyl-CoA hydratase/isomerase NtRootC7_17230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootC7_17240 PF00108 Thiolase, N-terminal domain NtRootC7_17240 PF02803 Thiolase, C-terminal domain NtRootC7_17250 PF00570 HRDC domain NtRootC7_17250 PF01612 3'-5' exonuclease NtRootC7_17270 PF01212 Beta-eliminating lyase NtRootC7_17300 PF01641 SelR domain NtRootC7_17330 PF04073 Aminoacyl-tRNA editing domain NtRootC7_17340 PF02657 Fe-S metabolism associated domain NtRootC7_17350 PF00581 Rhodanese-like domain NtRootC7_17360 PF00308 Bacterial dnaA protein NtRootC7_17360 PF08299 Bacterial dnaA protein helix-turn-helix NtRootC7_17360 PF11638 DnaA N-terminal domain NtRootC7_17370 PF03594 Benzoate membrane transport protein NtRootC7_17390 PF13520 Amino acid permease NtRootC7_17410 PF01327 Polypeptide deformylase NtRootC7_17420 PF02911 Formyl transferase, C-terminal domain NtRootC7_17420 PF00551 Formyl transferase NtRootC7_17430 PF01029 NusB family NtRootC7_17430 PF01189 16S rRNA methyltransferase RsmB/F NtRootC7_17440 PF00834 Ribulose-phosphate 3 epimerase family NtRootC7_17470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootC7_17470 PF01872 RibD C-terminal domain NtRootC7_17480 PF00677 Lumazine binding domain NtRootC7_17490 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NtRootC7_17490 PF00925 GTP cyclohydrolase II NtRootC7_17500 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NtRootC7_17500 PF00925 GTP cyclohydrolase II NtRootC7_17510 PF00885 6,7-dimethyl-8-ribityllumazine synthase NtRootC7_17520 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NtRootC7_17530 PF01634 ATP phosphoribosyltransferase NtRootC7_17530 PF08029 HisG, C-terminal domain NtRootC7_17540 PF00977 Histidine biosynthesis protein NtRootC7_17560 PF01502 Phosphoribosyl-AMP cyclohydrolase NtRootC7_17570 PF04715 Anthranilate synthase component I, N terminal region NtRootC7_17570 PF00425 chorismate binding enzyme NtRootC7_17600 PF00218 Indole-3-glycerol phosphate synthase NtRootC7_17610 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC7_17620 PF00290 Tryptophan synthase alpha chain NtRootC7_17630 PF01790 Prolipoprotein diacylglyceryl transferase NtRootC7_17640 PF00310 Glutamine amidotransferases class-II NtRootC7_17640 PF04898 Glutamate synthase central domain NtRootC7_17640 PF01645 Conserved region in glutamate synthase NtRootC7_17640 PF01493 GXGXG motif NtRootC7_17650 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NtRootC7_17650 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_17660 PF00224 Pyruvate kinase, barrel domain NtRootC7_17660 PF02887 Pyruvate kinase, alpha/beta domain NtRootC7_17670 PF03861 ANTAR domain NtRootC7_17670 PF00072 Response regulator receiver domain NtRootC7_17700 PF02954 Bacterial regulatory protein, Fis family NtRootC7_17700 PF00158 Sigma-54 interaction domain NtRootC7_17700 PF00072 Response regulator receiver domain NtRootC7_17710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC7_17710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootC7_17710 PF01842 ACT domain NtRootC7_17720 PF00202 Aminotransferase class-III NtRootC7_17730 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC7_17740 PF01968 Hydantoinase/oxoprolinase NtRootC7_17740 PF05378 Hydantoinase/oxoprolinase N-terminal region NtRootC7_17760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_17760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_17770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC7_17770 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC7_17770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC7_17780 PF00171 Aldehyde dehydrogenase family NtRootC7_17790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_17790 PF10518 TAT (twin-arginine translocation) pathway signal sequence NtRootC7_17810 PF00920 Dehydratase family NtRootC7_17820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC7_17840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_17840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_17860 PF00005 ABC transporter NtRootC7_17870 PF02653 Branched-chain amino acid transport system / permease component NtRootC7_17880 PF13407 Periplasmic binding protein domain NtRootC7_17890 PF13183 4Fe-4S dicluster domain NtRootC7_17890 PF02913 FAD linked oxidases, C-terminal domain NtRootC7_17890 PF01565 FAD binding domain NtRootC7_17950 PF01261 Xylose isomerase-like TIM barrel NtRootC7_17960 PF08946 Osmosensory transporter coiled coil NtRootC7_17960 PF00083 Sugar (and other) transporter NtRootC7_17970 PF02224 Cytidylate kinase NtRootC7_17980 PF01081 KDPG and KHG aldolase NtRootC7_18000 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_18070 PF00106 short chain dehydrogenase NtRootC7_18090 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_18100 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_18100 PF14785 Maltose transport system permease protein MalF P2 domain NtRootC7_18120 PF03315 Serine dehydratase beta chain NtRootC7_18120 PF03313 Serine dehydratase alpha chain NtRootC7_18130 PF03466 LysR substrate binding domain NtRootC7_18130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_18150 PF07690 Major Facilitator Superfamily NtRootC7_18180 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_18180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NtRootC7_18190 PF01638 HxlR-like helix-turn-helix NtRootC7_18220 PF06736 Protein of unknown function (DUF1211) NtRootC7_18230 PF00199 Catalase NtRootC7_18230 PF06628 Catalase-related immune-responsive NtRootC7_18230 PF18011 C-terminal domain found in long catalases NtRootC7_18260 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_18280 PF00012 Hsp70 protein NtRootC7_18290 PF01025 GrpE NtRootC7_18300 PF00226 DnaJ domain NtRootC7_18300 PF01556 DnaJ C terminal domain NtRootC7_18320 PF07724 AAA domain (Cdc48 subfamily) NtRootC7_18320 PF17871 AAA lid domain NtRootC7_18320 PF02861 Clp amino terminal domain, pathogenicity island component NtRootC7_18320 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootC7_18320 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC7_18330 PF00085 Thioredoxin NtRootC7_18340 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_18350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootC7_18360 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_18370 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_18370 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootC7_18380 PF00005 ABC transporter NtRootC7_18380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC7_18390 PF00005 ABC transporter NtRootC7_18390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC7_18400 PF08244 Glycosyl hydrolases family 32 C terminal NtRootC7_18400 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootC7_18410 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootC7_18410 PF08244 Glycosyl hydrolases family 32 C terminal NtRootC7_18420 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_18420 PF07729 FCD domain NtRootC7_18440 PF01266 FAD dependent oxidoreductase NtRootC7_18470 PF01042 Endoribonuclease L-PSP NtRootC7_18520 PF07729 FCD domain NtRootC7_18520 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_18530 PF00171 Aldehyde dehydrogenase family NtRootC7_18540 PF00202 Aminotransferase class-III NtRootC7_18560 PF00005 ABC transporter NtRootC7_18570 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_18580 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC7_18600 PF01266 FAD dependent oxidoreductase NtRootC7_18610 PF00171 Aldehyde dehydrogenase family NtRootC7_18620 PF00180 Isocitrate/isopropylmalate dehydrogenase NtRootC7_18630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC7_18650 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_18650 PF00107 Zinc-binding dehydrogenase NtRootC7_18660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootC7_18670 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_18680 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_18690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC7_18690 PF00005 ABC transporter NtRootC7_18700 PF16295 Tetracyclin repressor-like, C-terminal domain NtRootC7_18700 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_18710 PF00561 alpha/beta hydrolase fold NtRootC7_18720 PF00550 Phosphopantetheine attachment site NtRootC7_18720 PF08659 KR domain NtRootC7_18720 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootC7_18720 PF14765 Polyketide synthase dehydratase NtRootC7_18720 PF16197 Ketoacyl-synthetase C-terminal extension NtRootC7_18720 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_18720 PF00698 Acyl transferase domain NtRootC7_18720 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootC7_18800 PF00582 Universal stress protein family NtRootC7_18840 PF13185 GAF domain NtRootC7_18840 PF13492 GAF domain NtRootC7_18840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_18840 PF07730 Histidine kinase NtRootC7_18850 PF00582 Universal stress protein family NtRootC7_18870 PF00582 Universal stress protein family NtRootC7_18880 PF00582 Universal stress protein family NtRootC7_18890 PF10996 Beta-Casp domain NtRootC7_18890 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NtRootC7_18890 PF00753 Metallo-beta-lactamase superfamily NtRootC7_18910 PF00072 Response regulator receiver domain NtRootC7_18910 PF00196 Bacterial regulatory proteins, luxR family NtRootC7_18920 PF13185 GAF domain NtRootC7_18920 PF13492 GAF domain NtRootC7_18920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_18920 PF07730 Histidine kinase NtRootC7_18950 PF00107 Zinc-binding dehydrogenase NtRootC7_18950 PF13823 Alcohol dehydrogenase GroES-associated NtRootC7_18950 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_18960 PF00403 Heavy-metal-associated domain NtRootC7_18980 PF01515 Phosphate acetyl/butaryl transferase NtRootC7_18980 PF07085 DRTGG domain NtRootC7_18990 PF00582 Universal stress protein family NtRootC7_19000 PF00690 Cation transporter/ATPase, N-terminus NtRootC7_19000 PF00689 Cation transporting ATPase, C-terminus NtRootC7_19020 PF00582 Universal stress protein family NtRootC7_19030 PF00871 Acetokinase family NtRootC7_19040 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase NtRootC7_19040 PF09364 XFP N-terminal domain NtRootC7_19040 PF09363 XFP C-terminal domain NtRootC7_19060 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC7_19060 PF17866 AAA lid domain NtRootC7_19150 PF00391 PEP-utilising enzyme, mobile domain NtRootC7_19150 PF02896 PEP-utilising enzyme, TIM barrel domain NtRootC7_19150 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootC7_19160 PF03618 Kinase/pyrophosphorylase NtRootC7_19170 PF01037 Lrp/AsnC ligand binding domain NtRootC7_19180 PF00206 Lyase NtRootC7_19180 PF10415 Fumarase C C-terminus NtRootC7_19190 PF00171 Aldehyde dehydrogenase family NtRootC7_19200 PF03447 Homoserine dehydrogenase, NAD binding domain NtRootC7_19200 PF01842 ACT domain NtRootC7_19200 PF00742 Homoserine dehydrogenase NtRootC7_19240 PF04303 PrpF protein NtRootC7_19250 PF03466 LysR substrate binding domain NtRootC7_19250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_19260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_19260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_19280 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_19290 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_19300 PF01547 Bacterial extracellular solute-binding protein NtRootC7_19310 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_19330 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootC7_19330 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootC7_19340 PF00501 AMP-binding enzyme NtRootC7_19350 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NtRootC7_19370 PF00999 Sodium/hydrogen exchanger family NtRootC7_19380 PF04679 ATP dependent DNA ligase C terminal region NtRootC7_19380 PF13298 DNA polymerase Ligase (LigD) NtRootC7_19380 PF01068 ATP dependent DNA ligase domain NtRootC7_19410 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC7_19410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC7_19410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC7_19420 PF17755 UvrA DNA-binding domain NtRootC7_19440 PF03462 PCRF domain NtRootC7_19440 PF00472 RF-1 domain NtRootC7_19530 PF01546 Peptidase family M20/M25/M40 NtRootC7_19530 PF07687 Peptidase dimerisation domain NtRootC7_19540 PF00171 Aldehyde dehydrogenase family NtRootC7_19550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC7_19550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootC7_19560 PF01418 Helix-turn-helix domain, rpiR family NtRootC7_19560 PF01380 SIS domain NtRootC7_19570 PF01494 FAD binding domain NtRootC7_19570 PF07976 Phenol hydroxylase, C-terminal dimerisation domain NtRootC7_19580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NtRootC7_19580 PF01367 5'-3' exonuclease, C-terminal SAM fold NtRootC7_19600 PF03795 YCII-related domain NtRootC7_19610 PF08281 Sigma-70, region 4 NtRootC7_19610 PF04542 Sigma-70 region 2 NtRootC7_19640 PF00107 Zinc-binding dehydrogenase NtRootC7_19640 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_19650 PF08482 ATP-dependent helicase C-terminal NtRootC7_19650 PF00270 DEAD/DEAH box helicase NtRootC7_19650 PF00271 Helicase conserved C-terminal domain NtRootC7_19650 PF04408 Helicase associated domain (HA2) NtRootC7_19660 PF01979 Amidohydrolase family NtRootC7_19700 PF03144 Elongation factor Tu domain 2 NtRootC7_19700 PF03764 Elongation factor G, domain IV NtRootC7_19700 PF14492 Elongation Factor G, domain II NtRootC7_19700 PF00679 Elongation factor G C-terminus NtRootC7_19700 PF00009 Elongation factor Tu GTP binding domain NtRootC7_19730 PF01300 Telomere recombination NtRootC7_19750 PF00005 ABC transporter NtRootC7_19770 PF01869 BadF/BadG/BcrA/BcrD ATPase family NtRootC7_19780 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_19780 PF07702 UTRA domain NtRootC7_19790 PF09339 IclR helix-turn-helix domain NtRootC7_19790 PF01614 Bacterial transcriptional regulator NtRootC7_19810 PF00890 FAD binding domain NtRootC7_19830 PF00083 Sugar (and other) transporter NtRootC7_19830 PF07690 Major Facilitator Superfamily NtRootC7_19850 PF00266 Aminotransferase class-V NtRootC7_19860 PF03301 Tryptophan 2,3-dioxygenase NtRootC7_19880 PF01384 Phosphate transporter family NtRootC7_19930 PF03061 Thioesterase superfamily NtRootC7_19940 PF01367 5'-3' exonuclease, C-terminal SAM fold NtRootC7_19940 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NtRootC7_19940 PF00476 DNA polymerase family A NtRootC7_19950 PF13530 Sterol carrier protein domain NtRootC7_19950 PF17668 Acetyltransferase (GNAT) domain NtRootC7_19970 PF00575 S1 RNA binding domain NtRootC7_19980 PF09186 Domain of unknown function (DUF1949) NtRootC7_19980 PF01205 Uncharacterized protein family UPF0029 NtRootC7_19990 PF01121 Dephospho-CoA kinase NtRootC7_19990 PF04229 GrpB protein NtRootC7_20000 PF17757 UvrB interaction domain NtRootC7_20000 PF12344 Ultra-violet resistance protein B NtRootC7_20000 PF02151 UvrB/uvrC motif NtRootC7_20000 PF00271 Helicase conserved C-terminal domain NtRootC7_20000 PF04851 Type III restriction enzyme, res subunit NtRootC7_20010 PF03741 Integral membrane protein TerC family NtRootC7_20020 PF07690 Major Facilitator Superfamily NtRootC7_20030 PF00561 alpha/beta hydrolase fold NtRootC7_20040 PF13673 Acetyltransferase (GNAT) domain NtRootC7_20050 PF02515 CoA-transferase family III NtRootC7_20090 PF00005 ABC transporter NtRootC7_20090 PF17760 UvrA interaction domain NtRootC7_20090 PF17755 UvrA DNA-binding domain NtRootC7_20100 PF13419 Haloacid dehalogenase-like hydrolase NtRootC7_20110 PF00501 AMP-binding enzyme NtRootC7_20110 PF01553 Acyltransferase NtRootC7_20120 PF02151 UvrB/uvrC motif NtRootC7_20120 PF08459 UvrC Helix-hairpin-helix N-terminal NtRootC7_20120 PF01541 GIY-YIG catalytic domain NtRootC7_20120 PF12826 Helix-hairpin-helix motif NtRootC7_20130 PF03668 P-loop ATPase protein family NtRootC7_20140 PF01933 Uncharacterised protein family UPF0052 NtRootC7_20150 PF02650 WhiA C-terminal HTH domain NtRootC7_20150 PF14527 WhiA LAGLIDADG-like domain NtRootC7_20150 PF10298 WhiA N-terminal LAGLIDADG-like domain NtRootC7_20160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NtRootC7_20160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NtRootC7_20170 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NtRootC7_20170 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NtRootC7_20180 PF00162 Phosphoglycerate kinase NtRootC7_20190 PF00121 Triosephosphate isomerase NtRootC7_20200 PF03840 Preprotein translocase SecG subunit NtRootC7_20220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NtRootC7_20240 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NtRootC7_20240 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NtRootC7_20250 PF00342 Phosphoglucose isomerase NtRootC7_20260 PF00923 Transaldolase/Fructose-6-phosphate aldolase NtRootC7_20270 PF02779 Transketolase, pyrimidine binding domain NtRootC7_20270 PF02780 Transketolase, C-terminal domain NtRootC7_20270 PF00456 Transketolase, thiamine diphosphate binding domain NtRootC7_20280 PF01040 UbiA prenyltransferase family NtRootC7_20320 PF00005 ABC transporter NtRootC7_20320 PF02687 FtsX-like permease family NtRootC7_20320 PF12704 MacB-like periplasmic core domain NtRootC7_20330 PF02628 Cytochrome oxidase assembly protein NtRootC7_20350 PF00005 ABC transporter NtRootC7_20370 PF01458 Uncharacterized protein family (UPF0051) NtRootC7_20380 PF01458 Uncharacterized protein family (UPF0051) NtRootC7_20400 PF00005 ABC transporter NtRootC7_20410 PF01883 Iron-sulfur cluster assembly protein NtRootC7_20420 PF04228 Putative neutral zinc metallopeptidase NtRootC7_20430 PF13193 AMP-binding enzyme C-terminal domain NtRootC7_20430 PF00501 AMP-binding enzyme NtRootC7_20440 PF00108 Thiolase, N-terminal domain NtRootC7_20440 PF02803 Thiolase, C-terminal domain NtRootC7_20460 PF00005 ABC transporter NtRootC7_20470 PF02632 BioY family NtRootC7_20480 PF16326 ABC transporter C-terminal domain NtRootC7_20480 PF12848 ABC transporter NtRootC7_20480 PF00005 ABC transporter NtRootC7_20490 PF04073 Aminoacyl-tRNA editing domain NtRootC7_20490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootC7_20490 PF03129 Anticodon binding domain NtRootC7_20550 PF00005 ABC transporter NtRootC7_20590 PF00005 ABC transporter NtRootC7_20610 PF00588 SpoU rRNA Methylase family NtRootC7_20620 PF01197 Ribosomal protein L31 NtRootC7_20630 PF10437 Bacterial lipoate protein ligase C-terminus NtRootC7_20630 PF03099 Biotin/lipoate A/B protein ligase family NtRootC7_20660 PF01433 Peptidase family M1 domain NtRootC7_20660 PF11838 ERAP1-like C-terminal domain NtRootC7_20670 PF03601 Conserved hypothetical protein 698 NtRootC7_20680 PF04174 A circularly permuted ATPgrasp NtRootC7_20700 PF01841 Transglutaminase-like superfamily NtRootC7_20700 PF08379 Bacterial transglutaminase-like N-terminal region NtRootC7_20710 PF00106 short chain dehydrogenase NtRootC7_20720 PF00483 Nucleotidyl transferase NtRootC7_20730 PF13439 Glycosyltransferase Family 4 NtRootC7_20730 PF00534 Glycosyl transferases group 1 NtRootC7_20760 PF02803 Thiolase, C-terminal domain NtRootC7_20760 PF00108 Thiolase, N-terminal domain NtRootC7_20790 PF07687 Peptidase dimerisation domain NtRootC7_20790 PF01546 Peptidase family M20/M25/M40 NtRootC7_20830 PF02397 Bacterial sugar transferase NtRootC7_20840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_20840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_20850 PF16363 GDP-mannose 4,6 dehydratase NtRootC7_20860 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NtRootC7_20980 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NtRootC7_20990 PF16363 GDP-mannose 4,6 dehydratase NtRootC7_21000 PF00483 Nucleotidyl transferase NtRootC7_21010 PF00248 Aldo/keto reductase family NtRootC7_21020 PF02673 Bacitracin resistance protein BacA NtRootC7_21030 PF01406 tRNA synthetases class I (C) catalytic domain NtRootC7_21050 PF13419 Haloacid dehalogenase-like hydrolase NtRootC7_21060 PF02163 Peptidase family M50 NtRootC7_21060 PF00571 CBS domain NtRootC7_21070 PF08704 tRNA methyltransferase complex GCD14 subunit NtRootC7_21080 PF16450 Proteasomal ATPase OB C-terminal domain NtRootC7_21080 PF17758 Proteasomal ATPase OB N-terminal domain NtRootC7_21080 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC7_21090 PF03136 Pup-ligase protein NtRootC7_21100 PF05639 Pup-like protein NtRootC7_21110 PF00227 Proteasome subunit NtRootC7_21120 PF00227 Proteasome subunit NtRootC7_21130 PF03136 Pup-ligase protein NtRootC7_21140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NtRootC7_21150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NtRootC7_21160 PF13280 WYL domain NtRootC7_21180 PF02416 mttA/Hcf106 family NtRootC7_21190 PF00902 Sec-independent protein translocase protein (TatC) NtRootC7_21200 PF00271 Helicase conserved C-terminal domain NtRootC7_21200 PF08148 DSHCT (NUC185) domain NtRootC7_21200 PF00270 DEAD/DEAH box helicase NtRootC7_21210 PF07969 Amidohydrolase family NtRootC7_21220 PF00535 Glycosyl transferase family 2 NtRootC7_21230 PF13397 RNA polymerase-binding protein NtRootC7_21240 PF01145 SPFH domain / Band 7 family NtRootC7_21270 PF00326 Prolyl oligopeptidase family NtRootC7_21270 PF07676 WD40-like Beta Propeller Repeat NtRootC7_21280 PF01327 Polypeptide deformylase NtRootC7_21310 PF01494 FAD binding domain NtRootC7_21330 PF02797 Chalcone and stilbene synthases, C-terminal domain NtRootC7_21330 PF00195 Chalcone and stilbene synthases, N-terminal domain NtRootC7_21340 PF00005 ABC transporter NtRootC7_21340 PF17755 UvrA DNA-binding domain NtRootC7_21340 PF17760 UvrA interaction domain NtRootC7_21420 PF00591 Glycosyl transferase family, a/b domain NtRootC7_21420 PF02885 Glycosyl transferase family, helical bundle domain NtRootC7_21430 PF00510 Cytochrome c oxidase subunit III NtRootC7_21440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NtRootC7_21440 PF00034 Cytochrome c NtRootC7_21450 PF00355 Rieske [2Fe-2S] domain NtRootC7_21460 PF13631 Cytochrome b(N-terminal)/b6/petB NtRootC7_21480 PF07729 FCD domain NtRootC7_21480 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_21490 PF00381 PTS HPr component phosphorylation site NtRootC7_21500 PF12270 Cytochrome c oxidase subunit IV NtRootC7_21510 PF00115 Cytochrome C and Quinol oxidase polypeptide I NtRootC7_21520 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NtRootC7_21530 PF01521 Iron-sulphur cluster biosynthesis NtRootC7_21540 PF01546 Peptidase family M20/M25/M40 NtRootC7_21540 PF07687 Peptidase dimerisation domain NtRootC7_21550 PF11241 Protein of unknown function (DUF3043) NtRootC7_21560 PF01180 Dihydroorotate dehydrogenase NtRootC7_21570 PF00890 FAD binding domain NtRootC7_21600 PF01255 Putative undecaprenyl diphosphate synthase NtRootC7_21610 PF02565 Recombination protein O C terminal NtRootC7_21610 PF11967 Recombination protein O N terminal NtRootC7_21620 PF08502 LeuA allosteric (dimerisation) domain NtRootC7_21620 PF00682 HMGL-like NtRootC7_21630 PF05649 Peptidase family M13 NtRootC7_21630 PF01431 Peptidase family M13 NtRootC7_21640 PF03816 Cell envelope-related transcriptional attenuator domain NtRootC7_21650 PF07650 KH domain NtRootC7_21650 PF01926 50S ribosome-binding GTPase NtRootC7_21660 PF03471 Transporter associated domain NtRootC7_21660 PF01595 Cyclin M transmembrane N-terminal domain NtRootC7_21660 PF00571 CBS domain NtRootC7_21670 PF02130 Uncharacterized protein family UPF0054 NtRootC7_21680 PF02562 PhoH-like protein NtRootC7_21700 PF04452 RNA methyltransferase NtRootC7_21710 PF00226 DnaJ domain NtRootC7_21710 PF01556 DnaJ C terminal domain NtRootC7_21710 PF00684 DnaJ central domain NtRootC7_21720 PF01628 HrcA protein C terminal domain NtRootC7_21720 PF08220 DeoR-like helix-turn-helix domain NtRootC7_21750 PF06969 HemN C-terminal domain NtRootC7_21750 PF04055 Radical SAM superfamily NtRootC7_21760 PF00679 Elongation factor G C-terminus NtRootC7_21760 PF00009 Elongation factor Tu GTP binding domain NtRootC7_21760 PF06421 GTP-binding protein LepA C-terminus NtRootC7_21780 PF01649 Ribosomal protein S20 NtRootC7_21830 PF02645 Uncharacterised protein, DegV family COG1307 NtRootC7_21840 PF09334 tRNA synthetases class I (M) NtRootC7_21840 PF00133 tRNA synthetases class I (I, L, M and V) NtRootC7_21840 PF13603 Leucyl-tRNA synthetase, Domain 2 NtRootC7_21840 PF08264 Anticodon-binding domain of tRNA NtRootC7_21850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootC7_21850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootC7_21860 PF00230 Major intrinsic protein NtRootC7_21870 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NtRootC7_21870 PF01266 FAD dependent oxidoreductase NtRootC7_21890 PF04198 Putative sugar-binding domain NtRootC7_21900 PF00248 Aldo/keto reductase family NtRootC7_21920 PF13439 Glycosyltransferase Family 4 NtRootC7_21930 PF17764 3′ DNA-binding domain (3′BD) NtRootC7_21940 PF02773 S-adenosylmethionine synthetase, C-terminal domain NtRootC7_21940 PF02772 S-adenosylmethionine synthetase, central domain NtRootC7_21940 PF00438 S-adenosylmethionine synthetase, N-terminal domain NtRootC7_21950 PF04127 DNA / pantothenate metabolism flavoprotein NtRootC7_21950 PF02441 Flavoprotein NtRootC7_21960 PF01192 RNA polymerase Rpb6 NtRootC7_21970 PF00625 Guanylate kinase NtRootC7_21990 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NtRootC7_22000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NtRootC7_22000 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NtRootC7_22000 PF02142 MGS-like domain NtRootC7_22010 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NtRootC7_22010 PF00117 Glutamine amidotransferase class-I NtRootC7_22030 PF01979 Amidohydrolase family NtRootC7_22040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NtRootC7_22040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NtRootC7_22050 PF00156 Phosphoribosyl transferase domain NtRootC7_22070 PF01029 NusB family NtRootC7_22080 PF08207 Elongation factor P (EF-P) KOW-like domain NtRootC7_22080 PF01132 Elongation factor P (EF-P) OB domain NtRootC7_22080 PF09285 Elongation factor P, C-terminal NtRootC7_22100 PF01761 3-dehydroquinate synthase NtRootC7_22110 PF01202 Shikimate kinase NtRootC7_22120 PF01264 Chorismate synthase NtRootC7_22130 PF08501 Shikimate dehydrogenase substrate binding domain NtRootC7_22130 PF01488 Shikimate / quinate 5-dehydrogenase NtRootC7_22130 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NtRootC7_22150 PF03652 Holliday junction resolvase NtRootC7_22160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NtRootC7_22160 PF01411 tRNA synthetases class II (A) NtRootC7_22160 PF02272 DHHA1 domain NtRootC7_22190 PF00163 Ribosomal protein S4/S9 N-terminal domain NtRootC7_22190 PF01479 S4 domain NtRootC7_22200 PF16193 AAA C-terminal domain NtRootC7_22200 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC7_22200 PF12002 MgsA AAA+ ATPase C terminal NtRootC7_22230 PF02938 GAD domain NtRootC7_22230 PF00152 tRNA synthetases class II (D, K and N) NtRootC7_22230 PF01336 OB-fold nucleic acid binding domain NtRootC7_22240 PF03129 Anticodon binding domain NtRootC7_22240 PF13393 Histidyl-tRNA synthetase NtRootC7_22260 PF03993 Domain of Unknown Function (DUF349) NtRootC7_22280 PF04607 Region found in RelA / SpoT proteins NtRootC7_22280 PF02824 TGS domain NtRootC7_22280 PF13291 ACT domain NtRootC7_22290 PF07549 SecD/SecF GG Motif NtRootC7_22290 PF02355 Protein export membrane protein NtRootC7_22300 PF07549 SecD/SecF GG Motif NtRootC7_22300 PF02355 Protein export membrane protein NtRootC7_22320 PF05496 Holliday junction DNA helicase RuvB P-loop domain NtRootC7_22320 PF17864 RuvB AAA lid domain NtRootC7_22320 PF05491 RuvB C-terminal winged helix domain NtRootC7_22330 PF01330 RuvA N terminal domain NtRootC7_22330 PF07499 RuvA, C-terminal domain NtRootC7_22340 PF02075 Crossover junction endodeoxyribonuclease RuvC NtRootC7_22350 PF01709 Transcriptional regulator NtRootC7_22360 PF01174 SNO glutamine amidotransferase family NtRootC7_22370 PF08353 Domain of unknown function (DUF1727) NtRootC7_22370 PF08245 Mur ligase middle domain NtRootC7_22380 PF07685 CobB/CobQ-like glutamine amidotransferase domain NtRootC7_22400 PF01432 Peptidase family M3 NtRootC7_22410 PF01680 SOR/SNZ family NtRootC7_22420 PF01066 CDP-alcohol phosphatidyltransferase NtRootC7_22430 PF01230 HIT domain NtRootC7_22440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootC7_22440 PF03129 Anticodon binding domain NtRootC7_22440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NtRootC7_22450 PF02811 PHP domain NtRootC7_22450 PF14579 Helix-hairpin-helix motif NtRootC7_22450 PF07733 Bacterial DNA polymerase III alpha NTPase domain NtRootC7_22450 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NtRootC7_22470 PF01494 FAD binding domain NtRootC7_22500 PF02586 SOS response associated peptidase (SRAP) NtRootC7_22510 PF00462 Glutaredoxin NtRootC7_22520 PF00107 Zinc-binding dehydrogenase NtRootC7_22520 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_22530 PF00753 Metallo-beta-lactamase superfamily NtRootC7_22540 PF00384 Molybdopterin oxidoreductase NtRootC7_22540 PF01568 Molydopterin dinucleotide binding domain NtRootC7_22590 PF01494 FAD binding domain NtRootC7_22620 PF06250 YhcG PDDEXK nuclease domain NtRootC7_22620 PF17761 DUF1016 N-terminal domain NtRootC7_22640 PF00005 ABC transporter NtRootC7_22640 PF08402 TOBE domain NtRootC7_22650 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_22670 PF00268 Ribonucleotide reductase, small chain NtRootC7_22680 PF08343 Ribonucleotide reductase N-terminal NtRootC7_22680 PF00317 Ribonucleotide reductase, all-alpha domain NtRootC7_22680 PF02867 Ribonucleotide reductase, barrel domain NtRootC7_22690 PF07972 NrdI Flavodoxin like NtRootC7_22710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_22710 PF03466 LysR substrate binding domain NtRootC7_22780 PF07726 ATPase family associated with various cellular activities (AAA) NtRootC7_22780 PF17863 AAA lid domain NtRootC7_22800 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_22810 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_22830 PF00480 ROK family NtRootC7_22840 PF05175 Methyltransferase small domain NtRootC7_22860 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_22890 PF01467 Cytidylyltransferase-like NtRootC7_22910 PF00171 Aldehyde dehydrogenase family NtRootC7_22920 PF00696 Amino acid kinase family NtRootC7_22920 PF01472 PUA domain NtRootC7_22930 PF09269 Domain of unknown function (DUF1967) NtRootC7_22930 PF01018 GTP1/OBG NtRootC7_22930 PF01926 50S ribosome-binding GTPase NtRootC7_22940 PF01016 Ribosomal L27 protein NtRootC7_22950 PF00829 Ribosomal prokaryotic L21 protein NtRootC7_22960 PF02581 Thiamine monophosphate synthase NtRootC7_22960 PF03070 TENA/THI-4/PQQC family NtRootC7_22960 PF08543 Phosphomethylpyrimidine kinase NtRootC7_22970 PF10150 Ribonuclease E/G family NtRootC7_22990 PF00334 Nucleoside diphosphate kinase NtRootC7_23010 PF02875 Mur ligase family, glutamate ligase domain NtRootC7_23010 PF08245 Mur ligase middle domain NtRootC7_23020 PF08264 Anticodon-binding domain of tRNA NtRootC7_23020 PF00133 tRNA synthetases class I (I, L, M and V) NtRootC7_23040 PF00106 short chain dehydrogenase NtRootC7_23050 PF00133 tRNA synthetases class I (I, L, M and V) NtRootC7_23050 PF08264 Anticodon-binding domain of tRNA NtRootC7_23060 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootC7_23060 PF06827 Zinc finger found in FPG and IleRS NtRootC7_23070 PF01323 DSBA-like thioredoxin domain NtRootC7_23080 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootC7_23080 PF07724 AAA domain (Cdc48 subfamily) NtRootC7_23080 PF06689 ClpX C4-type zinc finger NtRootC7_23090 PF00574 Clp protease NtRootC7_23100 PF00574 Clp protease NtRootC7_23110 PF05698 Bacterial trigger factor protein (TF) C-terminus NtRootC7_23110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NtRootC7_23110 PF05697 Bacterial trigger factor protein (TF) NtRootC7_23120 PF06827 Zinc finger found in FPG and IleRS NtRootC7_23120 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NtRootC7_23120 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootC7_23130 PF02502 Ribose/Galactose Isomerase NtRootC7_23150 PF11838 ERAP1-like C-terminal domain NtRootC7_23150 PF01433 Peptidase family M1 domain NtRootC7_23180 PF00924 Mechanosensitive ion channel NtRootC7_23190 PF01152 Bacterial-like globin NtRootC7_23220 PF12848 ABC transporter NtRootC7_23220 PF00005 ABC transporter NtRootC7_23260 PF00436 Single-strand binding protein family NtRootC7_23290 PF00929 Exonuclease NtRootC7_23300 PF01327 Polypeptide deformylase NtRootC7_23340 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NtRootC7_23340 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NtRootC7_23350 PF03883 Peroxide stress protein YaaA NtRootC7_23360 PF02591 C4-type zinc ribbon domain NtRootC7_23370 PF01784 NIF3 (NGG1p interacting factor 3) NtRootC7_23380 PF01625 Peptide methionine sulfoxide reductase NtRootC7_23390 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC7_23400 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootC7_23410 PF00106 short chain dehydrogenase NtRootC7_23420 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NtRootC7_23420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC7_23430 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_23430 PF07729 FCD domain NtRootC7_23440 PF00107 Zinc-binding dehydrogenase NtRootC7_23440 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_23460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootC7_23460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC7_23470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC7_23480 PF01757 Acyltransferase family NtRootC7_23490 PF07690 Major Facilitator Superfamily NtRootC7_23490 PF00083 Sugar (and other) transporter NtRootC7_23500 PF09339 IclR helix-turn-helix domain NtRootC7_23500 PF01614 Bacterial transcriptional regulator NtRootC7_23530 PF02146 Sir2 family NtRootC7_23540 PF00578 AhpC/TSA family NtRootC7_23550 PF11253 Protein of unknown function (DUF3052) NtRootC7_23560 PF00456 Transketolase, thiamine diphosphate binding domain NtRootC7_23560 PF17831 Pyruvate dehydrogenase E1 component middle domain NtRootC7_23570 PF13556 PucR C-terminal helix-turn-helix domain NtRootC7_23570 PF17853 GGDEF-like domain NtRootC7_23580 PF00698 Acyl transferase domain NtRootC7_23590 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootC7_23590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootC7_23600 PF00550 Phosphopantetheine attachment site NtRootC7_23610 PF02801 Beta-ketoacyl synthase, C-terminal domain NtRootC7_23610 PF00109 Beta-ketoacyl synthase, N-terminal domain NtRootC7_23630 PF00589 Phage integrase family NtRootC7_23630 PF02899 Phage integrase, N-terminal SAM-like domain NtRootC7_23650 PF01078 Magnesium chelatase, subunit ChlI NtRootC7_23650 PF13335 Magnesium chelatase, subunit ChlI C-terminal NtRootC7_23660 PF02021 Uncharacterised protein family UPF0102 NtRootC7_23670 PF10611 Protein of unknown function (DUF2469) NtRootC7_23680 PF01351 Ribonuclease HII NtRootC7_23690 PF10502 Signal peptidase, peptidase S26 NtRootC7_23700 PF10502 Signal peptidase, peptidase S26 NtRootC7_23710 PF01245 Ribosomal protein L19 NtRootC7_23720 PF01746 tRNA (Guanine-1)-methyltransferase NtRootC7_23730 PF01782 RimM N-terminal domain NtRootC7_23750 PF00886 Ribosomal protein S16 NtRootC7_23770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootC7_23780 PF01979 Amidohydrolase family NtRootC7_23790 PF01964 Radical SAM ThiC family NtRootC7_23790 PF13667 ThiC-associated domain NtRootC7_23810 PF02978 Signal peptide binding domain NtRootC7_23810 PF02881 SRP54-type protein, helical bundle domain NtRootC7_23810 PF00448 SRP54-type protein, GTPase domain NtRootC7_23820 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NtRootC7_23820 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NtRootC7_23830 PF00543 Nitrogen regulatory protein P-II NtRootC7_23840 PF00909 Ammonium Transporter Family NtRootC7_23850 PF07690 Major Facilitator Superfamily NtRootC7_23860 PF00448 SRP54-type protein, GTPase domain NtRootC7_23860 PF02881 SRP54-type protein, helical bundle domain NtRootC7_23870 PF06470 SMC proteins Flexible Hinge Domain NtRootC7_23870 PF02463 RecF/RecN/SMC N terminal domain NtRootC7_23920 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NtRootC7_23920 PF06827 Zinc finger found in FPG and IleRS NtRootC7_23920 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NtRootC7_23930 PF14622 Ribonuclease-III-like NtRootC7_23930 PF00035 Double-stranded RNA binding motif NtRootC7_23940 PF01783 Ribosomal L32p protein family NtRootC7_23950 PF02620 Large ribosomal RNA subunit accumulation protein YceD NtRootC7_23960 PF01467 Cytidylyltransferase-like NtRootC7_23970 PF00155 Aminotransferase class I and II NtRootC7_24000 PF00270 DEAD/DEAH box helicase NtRootC7_24000 PF00271 Helicase conserved C-terminal domain NtRootC7_24000 PF17191 RecG wedge domain NtRootC7_24010 PF13684 Dihydroxyacetone kinase family NtRootC7_24010 PF02734 DAK2 domain NtRootC7_24020 PF00586 AIR synthase related protein, N-terminal domain NtRootC7_24020 PF02769 AIR synthase related protein, C-terminal domain NtRootC7_24040 PF07478 D-ala D-ala ligase C-terminus NtRootC7_24040 PF01820 D-ala D-ala ligase N-terminus NtRootC7_24050 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NtRootC7_24050 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NtRootC7_24070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NtRootC7_24080 PF00694 Aconitase C-terminal domain NtRootC7_24090 PF00330 Aconitase family (aconitate hydratase) NtRootC7_24100 PF01614 Bacterial transcriptional regulator NtRootC7_24100 PF09339 IclR helix-turn-helix domain NtRootC7_24150 PF00749 tRNA synthetases class I (E and Q), catalytic domain NtRootC7_24160 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC7_24170 PF00753 Metallo-beta-lactamase superfamily NtRootC7_24170 PF16123 Hydroxyacylglutathione hydrolase C-terminus NtRootC7_24190 PF01063 Amino-transferase class IV NtRootC7_24200 PF00180 Isocitrate/isopropylmalate dehydrogenase NtRootC7_24210 PF07730 Histidine kinase NtRootC7_24220 PF00196 Bacterial regulatory proteins, luxR family NtRootC7_24220 PF00072 Response regulator receiver domain NtRootC7_24230 PF00005 ABC transporter NtRootC7_24230 PF02687 FtsX-like permease family NtRootC7_24230 PF12704 MacB-like periplasmic core domain NtRootC7_24250 PF09334 tRNA synthetases class I (M) NtRootC7_24250 PF08264 Anticodon-binding domain of tRNA NtRootC7_24260 PF12704 MacB-like periplasmic core domain NtRootC7_24260 PF00005 ABC transporter NtRootC7_24260 PF02687 FtsX-like permease family NtRootC7_24280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC7_24280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootC7_24280 PF01842 ACT domain NtRootC7_24290 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NtRootC7_24290 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NtRootC7_24300 PF10369 Small subunit of acetolactate synthase NtRootC7_24310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC7_24310 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC7_24310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC7_24320 PF00920 Dehydratase family NtRootC7_24330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_24330 PF03466 LysR substrate binding domain NtRootC7_24340 PF00573 Ribosomal protein L4/L1 family NtRootC7_24350 PF07995 Glucose / Sorbosone dehydrogenase NtRootC7_24370 PF00578 AhpC/TSA family NtRootC7_24380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootC7_24390 PF06039 Malate:quinone oxidoreductase (Mqo) NtRootC7_24400 PF00873 AcrB/AcrD/AcrF family NtRootC7_24410 PF00296 Luciferase-like monooxygenase NtRootC7_24430 PF01841 Transglutaminase-like superfamily NtRootC7_24430 PF08379 Bacterial transglutaminase-like N-terminal region NtRootC7_24470 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC7_24490 PF00266 Aminotransferase class-V NtRootC7_24500 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NtRootC7_24500 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NtRootC7_24510 PF00890 FAD binding domain NtRootC7_24510 PF02910 Fumarate reductase flavoprotein C-term NtRootC7_24520 PF02445 Quinolinate synthetase A protein NtRootC7_24530 PF00293 NUDIX domain NtRootC7_24540 PF01037 Lrp/AsnC ligand binding domain NtRootC7_24550 PF00324 Amino acid permease NtRootC7_24560 PF00676 Dehydrogenase E1 component NtRootC7_24570 PF02780 Transketolase, C-terminal domain NtRootC7_24570 PF02779 Transketolase, pyrimidine binding domain NtRootC7_24580 PF02817 e3 binding domain NtRootC7_24580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootC7_24580 PF00364 Biotin-requiring enzyme NtRootC7_24610 PF05139 Erythromycin esterase NtRootC7_24610 PF00156 Phosphoribosyl transferase domain NtRootC7_24620 PF07690 Major Facilitator Superfamily NtRootC7_24620 PF00083 Sugar (and other) transporter NtRootC7_24630 PF09339 IclR helix-turn-helix domain NtRootC7_24630 PF01614 Bacterial transcriptional regulator NtRootC7_24640 PF17409 MoaF C-terminal domain NtRootC7_24640 PF10703 MoaF N-terminal domain NtRootC7_24660 PF14525 AraC-binding-like domain NtRootC7_24670 PF00884 Sulfatase NtRootC7_24670 PF16347 Domain of unknown function (DUF4976) NtRootC7_24680 PF00005 ABC transporter NtRootC7_24690 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_24700 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_24720 PF13382 Adenine deaminase C-terminal domain NtRootC7_24720 PF01979 Amidohydrolase family NtRootC7_24750 PF13476 AAA domain NtRootC7_24760 PF00149 Calcineurin-like phosphoesterase NtRootC7_24760 PF12320 Type 5 capsule protein repressor C-terminal domain NtRootC7_24770 PF00230 Major intrinsic protein NtRootC7_24790 PF02656 Domain of unknown function (DUF202) NtRootC7_24840 PF00005 ABC transporter NtRootC7_24860 PF09335 SNARE associated Golgi protein NtRootC7_24870 PF01725 Ham1 family NtRootC7_24880 PF03725 3' exoribonuclease family, domain 2 NtRootC7_24880 PF01138 3' exoribonuclease family, domain 1 NtRootC7_24890 PF00753 Metallo-beta-lactamase superfamily NtRootC7_24890 PF12706 Beta-lactamase superfamily domain NtRootC7_24900 PF01177 Asp/Glu/Hydantoin racemase NtRootC7_24920 PF02617 ATP-dependent Clp protease adaptor protein ClpS NtRootC7_24930 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NtRootC7_24930 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NtRootC7_24940 PF00857 Isochorismatase family NtRootC7_24950 PF04851 Type III restriction enzyme, res subunit NtRootC7_24970 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NtRootC7_24990 PF00005 ABC transporter NtRootC7_25000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NtRootC7_25060 PF01939 Endonuclease NucS NtRootC7_25070 PF01979 Amidohydrolase family NtRootC7_25080 PF00313 'Cold-shock' DNA-binding domain NtRootC7_25090 PF09924 Uncharacterised conserved protein (DUF2156) NtRootC7_25100 PF00756 Putative esterase NtRootC7_25120 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NtRootC7_25130 PF02874 ATP synthase alpha/beta family, beta-barrel domain NtRootC7_25130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NtRootC7_25140 PF00231 ATP synthase NtRootC7_25150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NtRootC7_25150 PF00306 ATP synthase alpha/beta chain, C terminal domain NtRootC7_25150 PF02874 ATP synthase alpha/beta family, beta-barrel domain NtRootC7_25160 PF00213 ATP synthase delta (OSCP) subunit NtRootC7_25170 PF00430 ATP synthase B/B' CF(0) NtRootC7_25180 PF00137 ATP synthase subunit C NtRootC7_25190 PF00119 ATP synthase A chain NtRootC7_25230 PF00953 Glycosyl transferase family 4 NtRootC7_25260 PF01300 Telomere recombination NtRootC7_25270 PF13649 Methyltransferase domain NtRootC7_25270 PF17827 PrmC N-terminal domain NtRootC7_25280 PF03462 PCRF domain NtRootC7_25280 PF00472 RF-1 domain NtRootC7_25290 PF07498 Rho termination factor, N-terminal domain NtRootC7_25290 PF07497 Rho termination factor, RNA-binding domain NtRootC7_25290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NtRootC7_25300 PF08544 GHMP kinases C terminal NtRootC7_25300 PF00288 GHMP kinases N terminal domain NtRootC7_25310 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC7_25320 PF03447 Homoserine dehydrogenase, NAD binding domain NtRootC7_25320 PF01842 ACT domain NtRootC7_25320 PF00742 Homoserine dehydrogenase NtRootC7_25330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NtRootC7_25330 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NtRootC7_25340 PF05746 DALR anticodon binding domain NtRootC7_25340 PF00750 tRNA synthetases class I (R) NtRootC7_25340 PF03485 Arginyl tRNA synthetase N terminal domain NtRootC7_25380 PF00042 Globin NtRootC7_25380 PF00175 Oxidoreductase NAD-binding domain NtRootC7_25380 PF00970 Oxidoreductase FAD-binding domain NtRootC7_25390 PF01447 Thermolysin metallopeptidase, catalytic domain NtRootC7_25390 PF02868 Thermolysin metallopeptidase, alpha-helical domain NtRootC7_25390 PF16485 Protealysin propeptide NtRootC7_25410 PF01965 DJ-1/PfpI family NtRootC7_25440 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NtRootC7_25440 PF00271 Helicase conserved C-terminal domain NtRootC7_25440 PF11898 Domain of unknown function (DUF3418) NtRootC7_25440 PF04408 Helicase associated domain (HA2) NtRootC7_25440 PF00270 DEAD/DEAH box helicase NtRootC7_25450 PF01230 HIT domain NtRootC7_25460 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_25460 PF00107 Zinc-binding dehydrogenase NtRootC7_25470 PF00581 Rhodanese-like domain NtRootC7_25510 PF01475 Ferric uptake regulator family NtRootC7_25520 PF00950 ABC 3 transport family NtRootC7_25530 PF00005 ABC transporter NtRootC7_25540 PF01297 Zinc-uptake complex component A periplasmic NtRootC7_25550 PF00571 CBS domain NtRootC7_25550 PF01595 Cyclin M transmembrane N-terminal domain NtRootC7_25560 PF00571 CBS domain NtRootC7_25560 PF01595 Cyclin M transmembrane N-terminal domain NtRootC7_25560 PF03471 Transporter associated domain NtRootC7_25570 PF16870 2-oxoglutarate dehydrogenase C-terminal NtRootC7_25570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootC7_25570 PF16078 2-oxoglutarate dehydrogenase N-terminus NtRootC7_25570 PF00676 Dehydrogenase E1 component NtRootC7_25570 PF02779 Transketolase, pyrimidine binding domain NtRootC7_25600 PF00144 Beta-lactamase NtRootC7_25640 PF04542 Sigma-70 region 2 NtRootC7_25640 PF08281 Sigma-70, region 4 NtRootC7_25660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NtRootC7_25670 PF03193 RsgA GTPase NtRootC7_25680 PF00459 Inositol monophosphatase family NtRootC7_25690 PF00266 Aminotransferase class-V NtRootC7_25700 PF08241 Methyltransferase domain NtRootC7_25720 PF07690 Major Facilitator Superfamily NtRootC7_25740 PF13180 PDZ domain NtRootC7_25750 PF01668 SmpB protein NtRootC7_25760 PF01551 Peptidase family M23 NtRootC7_25770 PF02687 FtsX-like permease family NtRootC7_25770 PF18075 FtsX extracellular domain NtRootC7_25780 PF00005 ABC transporter NtRootC7_25790 PF00472 RF-1 domain NtRootC7_25790 PF03462 PCRF domain NtRootC7_25850 PF00437 Type II/IV secretion system protein NtRootC7_25870 PF01183 Glycosyl hydrolases family 25 NtRootC7_25920 PF00535 Glycosyl transferase family 2 NtRootC7_25950 PF00005 ABC transporter NtRootC7_25950 PF14524 Wzt C-terminal domain NtRootC7_25960 PF01061 ABC-2 type transporter NtRootC7_25970 PF17994 Galactofuranosyltransferase 2 N-terminal NtRootC7_25980 PF03275 UDP-galactopyranose mutase NtRootC7_26020 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NtRootC7_26030 PF00132 Bacterial transferase hexapeptide (six repeats) NtRootC7_26050 PF01580 FtsK/SpoIIIE family NtRootC7_26050 PF12538 DNA transporter NtRootC7_26070 PF02467 Transcription factor WhiB NtRootC7_26080 PF07568 Histidine kinase NtRootC7_26080 PF12282 Signal transduction histidine kinase NtRootC7_26080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_26090 PF05088 Bacterial NAD-glutamate dehydrogenase NtRootC7_26160 PF01043 SecA preprotein cross-linking domain NtRootC7_26160 PF07517 SecA DEAD-like domain NtRootC7_26160 PF07516 SecA Wing and Scaffold domain NtRootC7_26170 PF06224 Winged helix DNA-binding domain NtRootC7_26180 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NtRootC7_26180 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NtRootC7_26210 PF10646 Sporulation and spore germination NtRootC7_26210 PF10647 Lipoprotein LpqB beta-propeller domain NtRootC7_26220 PF00672 HAMP domain NtRootC7_26220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_26220 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_26230 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_26230 PF00072 Response regulator receiver domain NtRootC7_26260 PF14258 Domain of unknown function (DUF4350) NtRootC7_26270 PF07726 ATPase family associated with various cellular activities (AAA) NtRootC7_26270 PF17863 AAA lid domain NtRootC7_26330 PF00005 ABC transporter NtRootC7_26330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC7_26340 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_26340 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootC7_26350 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_26400 PF00890 FAD binding domain NtRootC7_26410 PF00248 Aldo/keto reductase family NtRootC7_26430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NtRootC7_26430 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_26440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_26440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_26460 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NtRootC7_26460 PF08501 Shikimate dehydrogenase substrate binding domain NtRootC7_26470 PF00083 Sugar (and other) transporter NtRootC7_26470 PF07690 Major Facilitator Superfamily NtRootC7_26480 PF03466 LysR substrate binding domain NtRootC7_26480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_26490 PF00266 Aminotransferase class-V NtRootC7_26510 PF00781 Diacylglycerol kinase catalytic domain NtRootC7_26520 PF00226 DnaJ domain NtRootC7_26520 PF01556 DnaJ C terminal domain NtRootC7_26520 PF00684 DnaJ central domain NtRootC7_26530 PF00588 SpoU rRNA Methylase family NtRootC7_26540 PF04542 Sigma-70 region 2 NtRootC7_26540 PF04545 Sigma-70, region 4 NtRootC7_26550 PF10099 Anti-sigma-K factor rskA NtRootC7_26560 PF02447 GntP family permease NtRootC7_26580 PF02585 GlcNAc-PI de-N-acetylase NtRootC7_26590 PF00766 Electron transfer flavoprotein FAD-binding domain NtRootC7_26590 PF01012 Electron transfer flavoprotein domain NtRootC7_26600 PF01012 Electron transfer flavoprotein domain NtRootC7_26610 PF13180 PDZ domain NtRootC7_26630 PF04536 TPM domain NtRootC7_26640 PF04012 PspA/IM30 family NtRootC7_26650 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_26650 PF07702 UTRA domain NtRootC7_26660 PF03699 Uncharacterised protein family (UPF0182) NtRootC7_26670 PF05362 Lon protease (S16) C-terminal proteolytic domain NtRootC7_26670 PF13180 PDZ domain NtRootC7_26700 PF00580 UvrD/REP helicase N-terminal domain NtRootC7_26700 PF13361 UvrD-like helicase C-terminal domain NtRootC7_26700 PF00570 HRDC domain NtRootC7_26710 PF00293 NUDIX domain NtRootC7_26710 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NtRootC7_26710 PF09297 NADH pyrophosphatase zinc ribbon domain NtRootC7_26730 PF13361 UvrD-like helicase C-terminal domain NtRootC7_26730 PF00580 UvrD/REP helicase N-terminal domain NtRootC7_26770 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC7_26780 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_26790 PF00005 ABC transporter NtRootC7_26800 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootC7_26820 PF00202 Aminotransferase class-III NtRootC7_26830 PF00296 Luciferase-like monooxygenase NtRootC7_26840 PF00490 Delta-aminolevulinic acid dehydratase NtRootC7_26860 PF03900 Porphobilinogen deaminase, C-terminal domain NtRootC7_26860 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NtRootC7_26870 PF00762 Ferrochelatase NtRootC7_26880 PF06778 Chlorite dismutase NtRootC7_26890 PF01593 Flavin containing amine oxidoreductase NtRootC7_26900 PF01208 Uroporphyrinogen decarboxylase (URO-D) NtRootC7_26910 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NtRootC7_26910 PF01488 Shikimate / quinate 5-dehydrogenase NtRootC7_26910 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NtRootC7_26920 PF00106 short chain dehydrogenase NtRootC7_26930 PF00581 Rhodanese-like domain NtRootC7_26930 PF00899 ThiF family NtRootC7_26940 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_26970 PF01329 Pterin 4 alpha carbinolamine dehydratase NtRootC7_26980 PF05690 Thiazole biosynthesis protein ThiG NtRootC7_27000 PF01266 FAD dependent oxidoreductase NtRootC7_27000 PF05690 Thiazole biosynthesis protein ThiG NtRootC7_27010 PF02581 Thiamine monophosphate synthase NtRootC7_27030 PF00561 alpha/beta hydrolase fold NtRootC7_27040 PF00575 S1 RNA binding domain NtRootC7_27040 PF00773 RNB domain NtRootC7_27050 PF00271 Helicase conserved C-terminal domain NtRootC7_27050 PF00270 DEAD/DEAH box helicase NtRootC7_27060 PF01555 DNA methylase NtRootC7_27070 PF01914 MarC family integral membrane protein NtRootC7_27090 PF05195 Aminopeptidase P, N-terminal domain NtRootC7_27090 PF00557 Metallopeptidase family M24 NtRootC7_27110 PF03448 MgtE intracellular N domain NtRootC7_27110 PF01769 Divalent cation transporter NtRootC7_27110 PF00571 CBS domain NtRootC7_27130 PF01883 Iron-sulfur cluster assembly protein NtRootC7_27130 PF10609 NUBPL iron-transfer P-loop NTPase NtRootC7_27140 PF02416 mttA/Hcf106 family NtRootC7_27160 PF08281 Sigma-70, region 4 NtRootC7_27160 PF04542 Sigma-70 region 2 NtRootC7_27170 PF01596 O-methyltransferase NtRootC7_27210 PF03641 Possible lysine decarboxylase NtRootC7_27220 PF00005 ABC transporter NtRootC7_27230 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC7_27240 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_27250 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_27260 PF01546 Peptidase family M20/M25/M40 NtRootC7_27260 PF07687 Peptidase dimerisation domain NtRootC7_27270 PF14602 Hexapeptide repeat of succinyl-transferase NtRootC7_27270 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle NtRootC7_27300 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_27300 PF13977 BetI-type transcriptional repressor, C-terminal NtRootC7_27310 PF16363 GDP-mannose 4,6 dehydratase NtRootC7_27320 PF00285 Citrate synthase, C-terminal domain NtRootC7_27330 PF00155 Aminotransferase class I and II NtRootC7_27340 PF00037 4Fe-4S binding domain NtRootC7_27370 PF00009 Elongation factor Tu GTP binding domain NtRootC7_27370 PF00679 Elongation factor G C-terminus NtRootC7_27370 PF14492 Elongation Factor G, domain II NtRootC7_27370 PF03144 Elongation factor Tu domain 2 NtRootC7_27390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC7_27390 PF00005 ABC transporter NtRootC7_27400 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_27400 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootC7_27410 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_27420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NtRootC7_27440 PF01926 50S ribosome-binding GTPase NtRootC7_27440 PF06071 Protein of unknown function (DUF933) NtRootC7_27450 PF02646 RmuC family NtRootC7_27460 PF02401 LytB protein NtRootC7_27480 PF02601 Exonuclease VII, large subunit NtRootC7_27480 PF13742 OB-fold nucleic acid binding domain NtRootC7_27490 PF02609 Exonuclease VII small subunit NtRootC7_27500 PF03976 Polyphosphate kinase 2 (PPK2) NtRootC7_27510 PF00155 Aminotransferase class I and II NtRootC7_27530 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_27540 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_27550 PF00005 ABC transporter NtRootC7_27550 PF00571 CBS domain NtRootC7_27560 PF03193 RsgA GTPase NtRootC7_27570 PF13344 Haloacid dehalogenase-like hydrolase NtRootC7_27570 PF00293 NUDIX domain NtRootC7_27580 PF01301 Glycosyl hydrolases family 35 NtRootC7_27600 PF05726 Pirin C-terminal cupin domain NtRootC7_27600 PF02678 Pirin NtRootC7_27610 PF01869 BadF/BadG/BcrA/BcrD ATPase family NtRootC7_27640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_27640 PF03466 LysR substrate binding domain NtRootC7_27650 PF07690 Major Facilitator Superfamily NtRootC7_27660 PF06736 Protein of unknown function (DUF1211) NtRootC7_27710 PF01544 CorA-like Mg2+ transporter protein NtRootC7_27730 PF00210 Ferritin-like domain NtRootC7_27740 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NtRootC7_27750 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NtRootC7_27770 PF03109 ABC1 family NtRootC7_27780 PF03551 Transcriptional regulator PadR-like family NtRootC7_27950 PF03861 ANTAR domain NtRootC7_27950 PF00072 Response regulator receiver domain NtRootC7_27970 PF01434 Peptidase family M41 NtRootC7_27970 PF17862 AAA+ lid domain NtRootC7_27970 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC7_27970 PF06480 FtsH Extracellular NtRootC7_28080 PF13302 Acetyltransferase (GNAT) domain NtRootC7_28090 PF00483 Nucleotidyl transferase NtRootC7_28100 PF01812 5-formyltetrahydrofolate cyclo-ligase family NtRootC7_28140 PF00117 Glutamine amidotransferase class-I NtRootC7_28140 PF00958 GMP synthase C terminal domain NtRootC7_28140 PF02540 NAD synthase NtRootC7_28180 PF01266 FAD dependent oxidoreductase NtRootC7_28180 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NtRootC7_28190 PF00478 IMP dehydrogenase / GMP reductase domain NtRootC7_28230 PF00664 ABC transporter transmembrane region NtRootC7_28230 PF00005 ABC transporter NtRootC7_28240 PF00571 CBS domain NtRootC7_28240 PF00478 IMP dehydrogenase / GMP reductase domain NtRootC7_28250 PF01757 Acyltransferase family NtRootC7_28260 PF01757 Acyltransferase family NtRootC7_28270 PF00118 TCP-1/cpn60 chaperonin family NtRootC7_28280 PF00166 Chaperonin 10 Kd subunit NtRootC7_28300 PF18096 THUMP domain-like NtRootC7_28310 PF08501 Shikimate dehydrogenase substrate binding domain NtRootC7_28320 PF00444 Ribosomal protein L36 NtRootC7_28340 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootC7_28350 PF00814 Glycoprotease family NtRootC7_28370 PF00814 Glycoprotease family NtRootC7_28380 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NtRootC7_28390 PF00842 Alanine racemase, C-terminal domain NtRootC7_28390 PF01168 Alanine racemase, N-terminal domain NtRootC7_28410 PF02056 Family 4 glycosyl hydrolase NtRootC7_28410 PF11975 Family 4 glycosyl hydrolase C-terminal domain NtRootC7_28430 PF00534 Glycosyl transferases group 1 NtRootC7_28430 PF13439 Glycosyltransferase Family 4 NtRootC7_28440 PF01268 Formate--tetrahydrofolate ligase NtRootC7_28450 PF01658 Myo-inositol-1-phosphate synthase NtRootC7_28460 PF00248 Aldo/keto reductase family NtRootC7_28470 PF00128 Alpha amylase, catalytic domain NtRootC7_28470 PF11941 Domain of unknown function (DUF3459) NtRootC7_28480 PF00128 Alpha amylase, catalytic domain NtRootC7_28490 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NtRootC7_28490 PF00128 Alpha amylase, catalytic domain NtRootC7_28500 PF01256 Carbohydrate kinase NtRootC7_28500 PF03853 YjeF-related protein N-terminus NtRootC7_28510 PF01648 4'-phosphopantetheinyl transferase superfamily NtRootC7_28520 PF01380 SIS domain NtRootC7_28530 PF00485 Phosphoribulokinase / Uridine kinase family NtRootC7_28550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NtRootC7_28550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NtRootC7_28550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NtRootC7_28550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NtRootC7_28560 PF00380 Ribosomal protein S9/S16 NtRootC7_28570 PF00572 Ribosomal protein L13 NtRootC7_28610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NtRootC7_28620 PF00437 Type II/IV secretion system protein NtRootC7_28670 PF13180 PDZ domain NtRootC7_28690 PF01416 tRNA pseudouridine synthase NtRootC7_28700 PF01196 Ribosomal protein L17 NtRootC7_28710 PF01000 RNA polymerase Rpb3/RpoA insert domain NtRootC7_28710 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NtRootC7_28710 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NtRootC7_28720 PF00411 Ribosomal protein S11 NtRootC7_28730 PF00416 Ribosomal protein S13/S18 NtRootC7_28740 PF01176 Translation initiation factor 1A / IF-1 NtRootC7_28750 PF03576 Peptidase family S58 NtRootC7_28760 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_28770 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_28790 PF00557 Metallopeptidase family M24 NtRootC7_28810 PF00501 AMP-binding enzyme NtRootC7_28810 PF13193 AMP-binding enzyme C-terminal domain NtRootC7_28820 PF00067 Cytochrome P450 NtRootC7_28830 PF00535 Glycosyl transferase family 2 NtRootC7_28840 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NtRootC7_28840 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NtRootC7_28860 PF00344 SecY translocase NtRootC7_28870 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NtRootC7_28880 PF00327 Ribosomal protein L30p/L7e NtRootC7_28890 PF00333 Ribosomal protein S5, N-terminal domain NtRootC7_28890 PF03719 Ribosomal protein S5, C-terminal domain NtRootC7_28900 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NtRootC7_28910 PF00347 Ribosomal protein L6 NtRootC7_28920 PF00410 Ribosomal protein S8 NtRootC7_28930 PF00281 Ribosomal protein L5 NtRootC7_28930 PF00673 ribosomal L5P family C-terminus NtRootC7_28940 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NtRootC7_28950 PF00238 Ribosomal protein L14p/L23e NtRootC7_28960 PF00366 Ribosomal protein S17 NtRootC7_28970 PF00831 Ribosomal L29 protein NtRootC7_28980 PF00252 Ribosomal protein L16p/L10e NtRootC7_28990 PF00189 Ribosomal protein S3, C-terminal domain NtRootC7_28990 PF07650 KH domain NtRootC7_29000 PF00237 Ribosomal protein L22p/L17e NtRootC7_29010 PF00203 Ribosomal protein S19 NtRootC7_29020 PF03947 Ribosomal Proteins L2, C-terminal domain NtRootC7_29020 PF00181 Ribosomal Proteins L2, RNA binding domain NtRootC7_29030 PF00276 Ribosomal protein L23 NtRootC7_29040 PF00573 Ribosomal protein L4/L1 family NtRootC7_29050 PF00297 Ribosomal protein L3 NtRootC7_29060 PF00338 Ribosomal protein S10p/S20e NtRootC7_29070 PF00232 Glycosyl hydrolase family 1 NtRootC7_29100 PF03143 Elongation factor Tu C-terminal domain NtRootC7_29100 PF03144 Elongation factor Tu domain 2 NtRootC7_29100 PF00009 Elongation factor Tu GTP binding domain NtRootC7_29110 PF03144 Elongation factor Tu domain 2 NtRootC7_29110 PF00009 Elongation factor Tu GTP binding domain NtRootC7_29110 PF03764 Elongation factor G, domain IV NtRootC7_29110 PF14492 Elongation Factor G, domain II NtRootC7_29110 PF00679 Elongation factor G C-terminus NtRootC7_29120 PF00177 Ribosomal protein S7p/S5e NtRootC7_29130 PF00164 Ribosomal protein S12/S23 NtRootC7_29140 PF04997 RNA polymerase Rpb1, domain 1 NtRootC7_29140 PF00623 RNA polymerase Rpb1, domain 2 NtRootC7_29140 PF04983 RNA polymerase Rpb1, domain 3 NtRootC7_29140 PF04998 RNA polymerase Rpb1, domain 5 NtRootC7_29140 PF05000 RNA polymerase Rpb1, domain 4 NtRootC7_29150 PF04563 RNA polymerase beta subunit NtRootC7_29150 PF04561 RNA polymerase Rpb2, domain 2 NtRootC7_29150 PF04565 RNA polymerase Rpb2, domain 3 NtRootC7_29150 PF10385 RNA polymerase beta subunit external 1 domain NtRootC7_29150 PF00562 RNA polymerase Rpb2, domain 6 NtRootC7_29150 PF04560 RNA polymerase Rpb2, domain 7 NtRootC7_29160 PF00108 Thiolase, N-terminal domain NtRootC7_29160 PF02803 Thiolase, C-terminal domain NtRootC7_29170 PF04073 Aminoacyl-tRNA editing domain NtRootC7_29170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NtRootC7_29170 PF03129 Anticodon binding domain NtRootC7_29180 PF00542 Ribosomal protein L7/L12 C-terminal domain NtRootC7_29180 PF16320 Ribosomal protein L7/L12 dimerisation domain NtRootC7_29190 PF00466 Ribosomal protein L10 NtRootC7_29230 PF00687 Ribosomal protein L1p/L10e family NtRootC7_29240 PF03946 Ribosomal protein L11, N-terminal domain NtRootC7_29240 PF00298 Ribosomal protein L11, RNA binding domain NtRootC7_29250 PF02357 Transcription termination factor nusG NtRootC7_29260 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NtRootC7_29270 PF00155 Aminotransferase class I and II NtRootC7_29280 PF00196 Bacterial regulatory proteins, luxR family NtRootC7_29280 PF00072 Response regulator receiver domain NtRootC7_29350 PF00365 Phosphofructokinase NtRootC7_29370 PF07690 Major Facilitator Superfamily NtRootC7_29400 PF01571 Aminomethyltransferase folate-binding domain NtRootC7_29400 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC7_29410 PF03358 NADPH-dependent FMN reductase NtRootC7_29410 PF01566 Natural resistance-associated macrophage protein NtRootC7_29420 PF08768 Domain of unknown function (DUF1794) NtRootC7_29450 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_29460 PF00583 Acetyltransferase (GNAT) family NtRootC7_29470 PF02503 Polyphosphate kinase middle domain NtRootC7_29470 PF13090 Polyphosphate kinase C-terminal domain 2 NtRootC7_29470 PF17941 Polyphosphate kinase C-terminal domain 1 NtRootC7_29470 PF13089 Polyphosphate kinase N-terminal domain NtRootC7_29480 PF00293 NUDIX domain NtRootC7_29480 PF00300 Histidine phosphatase superfamily (branch 1) NtRootC7_29520 PF00303 Thymidylate synthase NtRootC7_29530 PF00186 Dihydrofolate reductase NtRootC7_29550 PF01118 Semialdehyde dehydrogenase, NAD binding domain NtRootC7_29550 PF02774 Semialdehyde dehydrogenase, dimerisation domain NtRootC7_29590 PF01565 FAD binding domain NtRootC7_29590 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NtRootC7_29600 PF07690 Major Facilitator Superfamily NtRootC7_29620 PF13452 N-terminal half of MaoC dehydratase NtRootC7_29670 PF00005 ABC transporter NtRootC7_29680 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_29690 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NtRootC7_29700 PF00248 Aldo/keto reductase family NtRootC7_29710 PF00128 Alpha amylase, catalytic domain NtRootC7_29720 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_29730 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_29750 PF00480 ROK family NtRootC7_29760 PF00999 Sodium/hydrogen exchanger family NtRootC7_29780 PF01476 LysM domain NtRootC7_29780 PF03734 L,D-transpeptidase catalytic domain NtRootC7_29790 PF03880 DbpA RNA binding domain NtRootC7_29790 PF00270 DEAD/DEAH box helicase NtRootC7_29790 PF00271 Helicase conserved C-terminal domain NtRootC7_29810 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_29810 PF00072 Response regulator receiver domain NtRootC7_29820 PF13493 Domain of unknown function (DUF4118) NtRootC7_29820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_29820 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_29820 PF02702 Osmosensitive K+ channel His kinase sensor domain NtRootC7_29820 PF00582 Universal stress protein family NtRootC7_29840 PF03738 Glutathionylspermidine synthase preATP-grasp NtRootC7_29850 PF13520 Amino acid permease NtRootC7_29860 PF09594 Glycosyltransferase family 87 NtRootC7_29870 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC7_29870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC7_29870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC7_29900 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_29910 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_29920 PF02837 Glycosyl hydrolases family 2, sugar binding domain NtRootC7_29920 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NtRootC7_29920 PF16353 Domain of unknown function(DUF4981) NtRootC7_29920 PF02929 Beta galactosidase small chain NtRootC7_29940 PF01638 HxlR-like helix-turn-helix NtRootC7_29950 PF04185 Phosphoesterase family NtRootC7_29950 PF05506 Domain of unknown function (DUF756) NtRootC7_29960 PF09594 Glycosyltransferase family 87 NtRootC7_29970 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootC7_29980 PF00571 CBS domain NtRootC7_29980 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC7_30020 PF00501 AMP-binding enzyme NtRootC7_30020 PF13193 AMP-binding enzyme C-terminal domain NtRootC7_30040 PF00085 Thioredoxin NtRootC7_30050 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_30050 PF17933 Tetracyclin repressor-like, C-terminal domain NtRootC7_30060 PF13732 Domain of unknown function (DUF4162) NtRootC7_30060 PF00005 ABC transporter NtRootC7_30100 PF07885 Ion channel NtRootC7_30120 PF04461 Protein of unknown function (DUF520) NtRootC7_30130 PF03239 Iron permease FTR1 family NtRootC7_30140 PF09375 Imelysin NtRootC7_30140 PF13473 Cupredoxin-like domain NtRootC7_30150 PF10518 TAT (twin-arginine translocation) pathway signal sequence NtRootC7_30150 PF04261 Dyp-type peroxidase family NtRootC7_30180 PF01435 Peptidase family M48 NtRootC7_30210 PF01475 Ferric uptake regulator family NtRootC7_30220 PF00199 Catalase NtRootC7_30220 PF06628 Catalase-related immune-responsive NtRootC7_30240 PF13520 Amino acid permease NtRootC7_30260 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_30260 PF00107 Zinc-binding dehydrogenase NtRootC7_30270 PF00171 Aldehyde dehydrogenase family NtRootC7_30290 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_30300 PF00892 EamA-like transporter family NtRootC7_30340 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_30350 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_30360 PF01842 ACT domain NtRootC7_30360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC7_30360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootC7_30370 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_30380 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NtRootC7_30380 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NtRootC7_30380 PF02278 Polysaccharide lyase family 8, super-sandwich domain NtRootC7_30390 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NtRootC7_30390 PF02278 Polysaccharide lyase family 8, super-sandwich domain NtRootC7_30390 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NtRootC7_30400 PF00202 Aminotransferase class-III NtRootC7_30410 PF00171 Aldehyde dehydrogenase family NtRootC7_30420 PF13556 PucR C-terminal helix-turn-helix domain NtRootC7_30420 PF17853 GGDEF-like domain NtRootC7_30420 PF05651 Putative sugar diacid recognition NtRootC7_30430 PF07690 Major Facilitator Superfamily NtRootC7_30440 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_30440 PF07729 FCD domain NtRootC7_30450 PF00581 Rhodanese-like domain NtRootC7_30450 PF00753 Metallo-beta-lactamase superfamily NtRootC7_30460 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_30470 PF14824 Sirohaem biosynthesis protein central NtRootC7_30470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NtRootC7_30470 PF10414 Sirohaem synthase dimerisation region NtRootC7_30480 PF04960 Glutaminase NtRootC7_30490 PF00296 Luciferase-like monooxygenase NtRootC7_30540 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_30550 PF00005 ABC transporter NtRootC7_30570 PF02574 Homocysteine S-methyltransferase NtRootC7_30580 PF00009 Elongation factor Tu GTP binding domain NtRootC7_30590 PF01507 Phosphoadenosine phosphosulfate reductase family NtRootC7_30600 PF01507 Phosphoadenosine phosphosulfate reductase family NtRootC7_30610 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NtRootC7_30610 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NtRootC7_30630 PF03458 UPF0126 domain NtRootC7_30660 PF00348 Polyprenyl synthetase NtRootC7_30670 PF01494 FAD binding domain NtRootC7_30680 PF01209 ubiE/COQ5 methyltransferase family NtRootC7_30690 PF00425 chorismate binding enzyme NtRootC7_30700 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC7_30710 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_30720 PF00005 ABC transporter NtRootC7_30740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC7_30760 PF13378 Enolase C-terminal domain-like NtRootC7_30760 PF18374 Enolase N-terminal domain-like NtRootC7_30800 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_30810 PF08244 Glycosyl hydrolases family 32 C terminal NtRootC7_30810 PF00251 Glycosyl hydrolases family 32 N-terminal domain NtRootC7_30820 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_30830 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_30920 PF04151 Bacterial pre-peptidase C-terminal domain NtRootC7_30920 PF00082 Subtilase family NtRootC7_30980 PF02817 e3 binding domain NtRootC7_30980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootC7_30980 PF00364 Biotin-requiring enzyme NtRootC7_30990 PF02780 Transketolase, C-terminal domain NtRootC7_30990 PF02779 Transketolase, pyrimidine binding domain NtRootC7_31000 PF00676 Dehydrogenase E1 component NtRootC7_31030 PF02350 UDP-N-acetylglucosamine 2-epimerase NtRootC7_31050 PF00483 Nucleotidyl transferase NtRootC7_31060 PF16363 GDP-mannose 4,6 dehydratase NtRootC7_31070 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NtRootC7_31080 PF13614 AAA domain NtRootC7_31160 PF13439 Glycosyltransferase Family 4 NtRootC7_31160 PF00534 Glycosyl transferases group 1 NtRootC7_31180 PF02397 Bacterial sugar transferase NtRootC7_31260 PF00561 alpha/beta hydrolase fold NtRootC7_31280 PF02386 Cation transport protein NtRootC7_31290 PF03814 Potassium-transporting ATPase A subunit NtRootC7_31310 PF02669 K+-transporting ATPase, c chain NtRootC7_31320 PF02702 Osmosensitive K+ channel His kinase sensor domain NtRootC7_31320 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_31320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_31320 PF13493 Domain of unknown function (DUF4118) NtRootC7_31320 PF00582 Universal stress protein family NtRootC7_31330 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_31330 PF00072 Response regulator receiver domain NtRootC7_31370 PF01022 Bacterial regulatory protein, arsR family NtRootC7_31440 PF01047 MarR family NtRootC7_31450 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NtRootC7_31480 PF00743 Flavin-binding monooxygenase-like NtRootC7_31490 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_31490 PF00107 Zinc-binding dehydrogenase NtRootC7_31510 PF00248 Aldo/keto reductase family NtRootC7_31520 PF00248 Aldo/keto reductase family NtRootC7_31580 PF00378 Enoyl-CoA hydratase/isomerase NtRootC7_31590 PF00970 Oxidoreductase FAD-binding domain NtRootC7_31590 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootC7_31590 PF00175 Oxidoreductase NAD-binding domain NtRootC7_31600 PF01883 Iron-sulfur cluster assembly protein NtRootC7_31610 PF05138 Phenylacetic acid catabolic protein NtRootC7_31620 PF06243 Phenylacetic acid degradation B NtRootC7_31630 PF05138 Phenylacetic acid catabolic protein NtRootC7_31640 PF01451 Low molecular weight phosphotyrosine protein phosphatase NtRootC7_31650 PF05257 CHAP domain NtRootC7_31650 PF01476 LysM domain NtRootC7_31660 PF00072 Response regulator receiver domain NtRootC7_31660 PF00672 HAMP domain NtRootC7_31660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_31660 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_31660 PF01627 Hpt domain NtRootC7_31660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NtRootC7_31670 PF00990 Diguanylate cyclase, GGDEF domain NtRootC7_31700 PF13439 Glycosyltransferase Family 4 NtRootC7_31720 PF00534 Glycosyl transferases group 1 NtRootC7_31720 PF13439 Glycosyltransferase Family 4 NtRootC7_31730 PF00535 Glycosyl transferase family 2 NtRootC7_31740 PF00326 Prolyl oligopeptidase family NtRootC7_31740 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NtRootC7_31750 PF08241 Methyltransferase domain NtRootC7_31770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_31770 PF18698 Histidine kinase sensor domain NtRootC7_31770 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_31770 PF00989 PAS fold NtRootC7_31770 PF00672 HAMP domain NtRootC7_31800 PF03707 Bacterial signalling protein N terminal repeat NtRootC7_31800 PF00990 Diguanylate cyclase, GGDEF domain NtRootC7_31800 PF00563 EAL domain NtRootC7_31820 PF03061 Thioesterase superfamily NtRootC7_31830 PF14535 AMP-binding enzyme C-terminal domain NtRootC7_31830 PF00501 AMP-binding enzyme NtRootC7_31850 PF00171 Aldehyde dehydrogenase family NtRootC7_31850 PF01575 MaoC like domain NtRootC7_31860 PF13350 Tyrosine phosphatase family NtRootC7_31880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NtRootC7_31880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NtRootC7_31890 PF00378 Enoyl-CoA hydratase/isomerase NtRootC7_31900 PF00108 Thiolase, N-terminal domain NtRootC7_31900 PF02803 Thiolase, C-terminal domain NtRootC7_31920 PF01738 Dienelactone hydrolase family NtRootC7_31930 PF00324 Amino acid permease NtRootC7_31940 PF01566 Natural resistance-associated macrophage protein NtRootC7_31940 PF03358 NADPH-dependent FMN reductase NtRootC7_31950 PF02517 CPBP intramembrane metalloprotease NtRootC7_31970 PF00378 Enoyl-CoA hydratase/isomerase NtRootC7_31980 PF00501 AMP-binding enzyme NtRootC7_31980 PF13193 AMP-binding enzyme C-terminal domain NtRootC7_31990 PF01040 UbiA prenyltransferase family NtRootC7_32030 PF00350 Dynamin family NtRootC7_32040 PF00350 Dynamin family NtRootC7_32070 PF00012 Hsp70 protein NtRootC7_32080 PF01578 Cytochrome C assembly protein NtRootC7_32100 PF02683 Cytochrome C biogenesis protein transmembrane region NtRootC7_32110 PF00578 AhpC/TSA family NtRootC7_32120 PF00300 Histidine phosphatase superfamily (branch 1) NtRootC7_32140 PF04264 YceI-like domain NtRootC7_32180 PF02629 CoA binding domain NtRootC7_32180 PF06971 Putative DNA-binding protein N-terminus NtRootC7_32220 PF12728 Helix-turn-helix domain NtRootC7_32230 PF00793 DAHP synthetase I family NtRootC7_32240 PF05448 Acetyl xylan esterase (AXE1) NtRootC7_32260 PF07690 Major Facilitator Superfamily NtRootC7_32280 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_32290 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_32310 PF02449 Beta-galactosidase NtRootC7_32310 PF08533 Beta-galactosidase C-terminal domain NtRootC7_32310 PF08532 Beta-galactosidase trimerisation domain NtRootC7_32320 PF01547 Bacterial extracellular solute-binding protein NtRootC7_32330 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_32340 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_32360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_32380 PF00171 Aldehyde dehydrogenase family NtRootC7_32390 PF13378 Enolase C-terminal domain-like NtRootC7_32390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootC7_32400 PF00701 Dihydrodipicolinate synthetase family NtRootC7_32420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_32420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_32430 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_32440 PF07729 FCD domain NtRootC7_32440 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_32450 PF01070 FMN-dependent dehydrogenase NtRootC7_32460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NtRootC7_32460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NtRootC7_32470 PF01022 Bacterial regulatory protein, arsR family NtRootC7_32490 PF00850 Histone deacetylase domain NtRootC7_32500 PF02386 Cation transport protein NtRootC7_32510 PF02080 TrkA-C domain NtRootC7_32510 PF02254 TrkA-N domain NtRootC7_32520 PF14748 Pyrroline-5-carboxylate reductase dimerisation NtRootC7_32520 PF03807 NADP oxidoreductase coenzyme F420-dependent NtRootC7_32530 PF01261 Xylose isomerase-like TIM barrel NtRootC7_32540 PF02541 Ppx/GppA phosphatase family NtRootC7_32560 PF01751 Toprim domain NtRootC7_32560 PF13368 Topoisomerase C-terminal repeat NtRootC7_32560 PF01131 DNA topoisomerase NtRootC7_32610 PF17773 UPF0176 acylphosphatase like domain NtRootC7_32610 PF12368 Rhodanase C-terminal NtRootC7_32610 PF00581 Rhodanese-like domain NtRootC7_32630 PF00270 DEAD/DEAH box helicase NtRootC7_32630 PF09369 Domain of unknown function (DUF1998) NtRootC7_32630 PF00271 Helicase conserved C-terminal domain NtRootC7_32690 PF00437 Type II/IV secretion system protein NtRootC7_32710 PF01367 5'-3' exonuclease, C-terminal SAM fold NtRootC7_32710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NtRootC7_32710 PF00476 DNA polymerase family A NtRootC7_32710 PF01612 3'-5' exonuclease NtRootC7_32730 PF00293 NUDIX domain NtRootC7_32740 PF00633 Helix-hairpin-helix motif NtRootC7_32740 PF00730 HhH-GPD superfamily base excision DNA repair protein NtRootC7_32740 PF10576 Iron-sulfur binding domain of endonuclease III NtRootC7_32770 PF16177 Acetyl-coenzyme A synthetase N-terminus NtRootC7_32770 PF00501 AMP-binding enzyme NtRootC7_32770 PF13193 AMP-binding enzyme C-terminal domain NtRootC7_32780 PF00455 DeoR C terminal sensor domain NtRootC7_32780 PF08220 DeoR-like helix-turn-helix domain NtRootC7_32790 PF00005 ABC transporter NtRootC7_32790 PF02687 FtsX-like permease family NtRootC7_32790 PF12704 MacB-like periplasmic core domain NtRootC7_32810 PF00665 Integrase core domain NtRootC7_32810 PF13936 Helix-turn-helix domain NtRootC7_32820 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_32840 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_32850 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_32870 PF16875 Glycosyl hydrolase family 36 N-terminal domain NtRootC7_32870 PF16874 Glycosyl hydrolase family 36 C-terminal domain NtRootC7_32880 PF01220 Dehydroquinase class II NtRootC7_32890 PF02674 Colicin V production protein NtRootC7_32900 PF13545 Crp-like helix-turn-helix domain NtRootC7_32900 PF00027 Cyclic nucleotide-binding domain NtRootC7_32940 PF00905 Penicillin binding protein transpeptidase domain NtRootC7_32940 PF00912 Transglycosylase NtRootC7_32950 PF00149 Calcineurin-like phosphoesterase NtRootC7_32960 PF00664 ABC transporter transmembrane region NtRootC7_32960 PF00005 ABC transporter NtRootC7_32970 PF00005 ABC transporter NtRootC7_32970 PF00664 ABC transporter transmembrane region NtRootC7_33010 PF01259 SAICAR synthetase NtRootC7_33020 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NtRootC7_33020 PF02843 Phosphoribosylglycinamide synthetase, C domain NtRootC7_33020 PF02844 Phosphoribosylglycinamide synthetase, N domain NtRootC7_33050 PF00375 Sodium:dicarboxylate symporter family NtRootC7_33080 PF01177 Asp/Glu/Hydantoin racemase NtRootC7_33090 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NtRootC7_33100 PF17831 Pyruvate dehydrogenase E1 component middle domain NtRootC7_33100 PF00456 Transketolase, thiamine diphosphate binding domain NtRootC7_33120 PF12804 MobA-like NTP transferase domain NtRootC7_33130 PF00583 Acetyltransferase (GNAT) family NtRootC7_33140 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NtRootC7_33140 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NtRootC7_33160 PF13478 XdhC Rossmann domain NtRootC7_33160 PF02625 XdhC and CoxI family NtRootC7_33170 PF00860 Permease family NtRootC7_33180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NtRootC7_33190 PF01979 Amidohydrolase family NtRootC7_33240 PF01014 Uricase NtRootC7_33250 PF00860 Permease family NtRootC7_33260 PF01614 Bacterial transcriptional regulator NtRootC7_33260 PF09339 IclR helix-turn-helix domain NtRootC7_33270 PF00390 Malic enzyme, N-terminal domain NtRootC7_33270 PF03949 Malic enzyme, NAD binding domain NtRootC7_33280 PF01274 Malate synthase NtRootC7_33300 PF07883 Cupin domain NtRootC7_33300 PF05899 Protein of unknown function (DUF861) NtRootC7_33330 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_33350 PF01547 Bacterial extracellular solute-binding protein NtRootC7_33360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_33360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_33370 PF00884 Sulfatase NtRootC7_33380 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_33390 PF02278 Polysaccharide lyase family 8, super-sandwich domain NtRootC7_33390 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NtRootC7_33390 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NtRootC7_33400 PF02661 Fic/DOC family NtRootC7_33420 PF04978 Protein of unknown function (DUF664) NtRootC7_33480 PF07690 Major Facilitator Superfamily NtRootC7_33510 PF00912 Transglycosylase NtRootC7_33510 PF00905 Penicillin binding protein transpeptidase domain NtRootC7_33530 PF07690 Major Facilitator Superfamily NtRootC7_33540 PF00909 Ammonium Transporter Family NtRootC7_33560 PF01740 STAS domain NtRootC7_33560 PF00916 Sulfate permease family NtRootC7_33600 PF03466 LysR substrate binding domain NtRootC7_33600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_33620 PF01717 Cobalamin-independent synthase, Catalytic domain NtRootC7_33620 PF08267 Cobalamin-independent synthase, N-terminal domain NtRootC7_33660 PF07690 Major Facilitator Superfamily NtRootC7_33680 PF01979 Amidohydrolase family NtRootC7_33690 PF03364 Polyketide cyclase / dehydrase and lipid transport NtRootC7_33700 PF01839 FG-GAP repeat NtRootC7_33700 PF18370 Rhamnogalacturonan I lyases beta-sheet domain NtRootC7_33710 PF00296 Luciferase-like monooxygenase NtRootC7_33730 PF07690 Major Facilitator Superfamily NtRootC7_33750 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_33760 PF00005 ABC transporter NtRootC7_33760 PF09383 NIL domain NtRootC7_33770 PF03180 NLPA lipoprotein NtRootC7_33780 PF00296 Luciferase-like monooxygenase NtRootC7_33870 PF12146 Serine aminopeptidase, S33 NtRootC7_33910 PF00664 ABC transporter transmembrane region NtRootC7_33910 PF00005 ABC transporter NtRootC7_33920 PF00664 ABC transporter transmembrane region NtRootC7_33920 PF00005 ABC transporter NtRootC7_33930 PF02525 Flavodoxin-like fold NtRootC7_33940 PF01638 HxlR-like helix-turn-helix NtRootC7_33950 PF05235 CHAD domain NtRootC7_33950 PF01928 CYTH domain NtRootC7_33960 PF03364 Polyketide cyclase / dehydrase and lipid transport NtRootC7_34030 PF02223 Thymidylate kinase NtRootC7_34060 PF00293 NUDIX domain NtRootC7_34060 PF13344 Haloacid dehalogenase-like hydrolase NtRootC7_34220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_34220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_34240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_34240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_34250 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_34260 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_34270 PF01547 Bacterial extracellular solute-binding protein NtRootC7_34280 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_34290 PF10137 Predicted nucleotide-binding protein containing TIR-like domain NtRootC7_34350 PF01261 Xylose isomerase-like TIM barrel NtRootC7_34360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NtRootC7_34360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NtRootC7_34370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC7_34370 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC7_34370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC7_34380 PF02595 Glycerate kinase family NtRootC7_34390 PF01979 Amidohydrolase family NtRootC7_34400 PF00072 Response regulator receiver domain NtRootC7_34400 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_34410 PF00578 AhpC/TSA family NtRootC7_34420 PF00072 Response regulator receiver domain NtRootC7_34420 PF00486 Transcriptional regulatory protein, C terminal NtRootC7_34430 PF00535 Glycosyl transferase family 2 NtRootC7_34430 PF07238 PilZ domain NtRootC7_34430 PF03552 Cellulose synthase NtRootC7_34440 PF01740 STAS domain NtRootC7_34460 PF00266 Aminotransferase class-V NtRootC7_34500 PF07690 Major Facilitator Superfamily NtRootC7_34510 PF01638 HxlR-like helix-turn-helix NtRootC7_34520 PF01569 PAP2 superfamily NtRootC7_34540 PF00576 HIUase/Transthyretin family NtRootC7_34550 PF00665 Integrase core domain NtRootC7_34550 PF13936 Helix-turn-helix domain NtRootC7_34570 PF00156 Phosphoribosyl transferase domain NtRootC7_34580 PF00586 AIR synthase related protein, N-terminal domain NtRootC7_34580 PF02769 AIR synthase related protein, C-terminal domain NtRootC7_34620 PF07724 AAA domain (Cdc48 subfamily) NtRootC7_34620 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC7_34620 PF02861 Clp amino terminal domain, pathogenicity island component NtRootC7_34620 PF10431 C-terminal, D2-small domain, of ClpB protein NtRootC7_34620 PF17871 AAA lid domain NtRootC7_34640 PF03459 TOBE domain NtRootC7_34640 PF00005 ABC transporter NtRootC7_34650 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_34670 PF03459 TOBE domain NtRootC7_34680 PF07730 Histidine kinase NtRootC7_34690 PF00072 Response regulator receiver domain NtRootC7_34690 PF00196 Bacterial regulatory proteins, luxR family NtRootC7_34710 PF01565 FAD binding domain NtRootC7_34710 PF08031 Berberine and berberine like NtRootC7_34750 PF03733 Inner membrane component domain NtRootC7_34760 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NtRootC7_34770 PF05962 HutD NtRootC7_34780 PF00893 Small Multidrug Resistance protein NtRootC7_34790 PF00893 Small Multidrug Resistance protein NtRootC7_34800 PF00248 Aldo/keto reductase family NtRootC7_34810 PF00753 Metallo-beta-lactamase superfamily NtRootC7_34820 PF00270 DEAD/DEAH box helicase NtRootC7_34820 PF00271 Helicase conserved C-terminal domain NtRootC7_34830 PF07690 Major Facilitator Superfamily NtRootC7_34840 PF00376 MerR family regulatory protein NtRootC7_34840 PF09278 MerR, DNA binding NtRootC7_34850 PF05175 Methyltransferase small domain NtRootC7_34850 PF08468 Methyltransferase small domain N-terminal NtRootC7_34870 PF07687 Peptidase dimerisation domain NtRootC7_34870 PF01546 Peptidase family M20/M25/M40 NtRootC7_34880 PF00083 Sugar (and other) transporter NtRootC7_34890 PF07690 Major Facilitator Superfamily NtRootC7_34920 PF02390 Putative methyltransferase NtRootC7_34960 PF04542 Sigma-70 region 2 NtRootC7_34960 PF04545 Sigma-70, region 4 NtRootC7_35000 PF00176 SNF2 family N-terminal domain NtRootC7_35000 PF00271 Helicase conserved C-terminal domain NtRootC7_35000 PF04434 SWIM zinc finger NtRootC7_35030 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_35030 PF07702 UTRA domain NtRootC7_35100 PF00171 Aldehyde dehydrogenase family NtRootC7_35110 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootC7_35110 PF00175 Oxidoreductase NAD-binding domain NtRootC7_35130 PF12697 Alpha/beta hydrolase family NtRootC7_35150 PF00106 short chain dehydrogenase NtRootC7_35160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NtRootC7_35160 PF00205 Thiamine pyrophosphate enzyme, central domain NtRootC7_35160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NtRootC7_35190 PF00355 Rieske [2Fe-2S] domain NtRootC7_35210 PF01047 MarR family NtRootC7_35220 PF01958 Domain of unknown function DUF108 NtRootC7_35220 PF03447 Homoserine dehydrogenase, NAD binding domain NtRootC7_35230 PF13411 MerR HTH family regulatory protein NtRootC7_35240 PF01556 DnaJ C terminal domain NtRootC7_35240 PF00684 DnaJ central domain NtRootC7_35240 PF00226 DnaJ domain NtRootC7_35250 PF01025 GrpE NtRootC7_35260 PF00012 Hsp70 protein NtRootC7_35270 PF05675 Protein of unknown function (DUF817) NtRootC7_35290 PF13305 Tetracyclin repressor-like, C-terminal domain NtRootC7_35290 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_35320 PF02311 AraC-like ligand binding domain NtRootC7_35320 PF12833 Helix-turn-helix domain NtRootC7_35350 PF16655 PhoD-like phosphatase, N-terminal domain NtRootC7_35350 PF09423 PhoD-like phosphatase NtRootC7_35360 PF05199 GMC oxidoreductase NtRootC7_35360 PF00732 GMC oxidoreductase NtRootC7_35370 PF14525 AraC-binding-like domain NtRootC7_35390 PF00155 Aminotransferase class I and II NtRootC7_35400 PF08240 Alcohol dehydrogenase GroES-like domain NtRootC7_35400 PF00107 Zinc-binding dehydrogenase NtRootC7_35430 PF13520 Amino acid permease NtRootC7_35450 PF01179 Copper amine oxidase, enzyme domain NtRootC7_35450 PF02728 Copper amine oxidase, N3 domain NtRootC7_35460 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_35460 PF13977 BetI-type transcriptional repressor, C-terminal NtRootC7_35470 PF01810 LysE type translocator NtRootC7_35480 PF00171 Aldehyde dehydrogenase family NtRootC7_35500 PF00800 Prephenate dehydratase NtRootC7_35500 PF01817 Chorismate mutase type II NtRootC7_35500 PF01842 ACT domain NtRootC7_35520 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_35530 PF01451 Low molecular weight phosphotyrosine protein phosphatase NtRootC7_35540 PF01758 Sodium Bile acid symporter family NtRootC7_35550 PF01022 Bacterial regulatory protein, arsR family NtRootC7_35570 PF03176 MMPL family NtRootC7_35590 PF08241 Methyltransferase domain NtRootC7_35600 PF03795 YCII-related domain NtRootC7_35620 PF04542 Sigma-70 region 2 NtRootC7_35620 PF08281 Sigma-70, region 4 NtRootC7_35630 PF00248 Aldo/keto reductase family NtRootC7_35660 PF00817 impB/mucB/samB family NtRootC7_35660 PF11799 impB/mucB/samB family C-terminal domain NtRootC7_35670 PF01810 LysE type translocator NtRootC7_35690 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_35700 PF01156 Inosine-uridine preferring nucleoside hydrolase NtRootC7_35710 PF07690 Major Facilitator Superfamily NtRootC7_35720 PF00294 pfkB family carbohydrate kinase NtRootC7_35750 PF01451 Low molecular weight phosphotyrosine protein phosphatase NtRootC7_35760 PF00425 chorismate binding enzyme NtRootC7_35760 PF04715 Anthranilate synthase component I, N terminal region NtRootC7_35760 PF00117 Glutamine amidotransferase class-I NtRootC7_35770 PF13091 PLD-like domain NtRootC7_35770 PF13396 Phospholipase_D-nuclease N-terminal NtRootC7_35790 PF00324 Amino acid permease NtRootC7_35800 PF02627 Carboxymuconolactone decarboxylase family NtRootC7_35810 PF00571 CBS domain NtRootC7_35810 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC7_35820 PF00221 Aromatic amino acid lyase NtRootC7_35830 PF00296 Luciferase-like monooxygenase NtRootC7_35860 PF01053 Cys/Met metabolism PLP-dependent enzyme NtRootC7_35880 PF04107 Glutamate-cysteine ligase family 2(GCS2) NtRootC7_35900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NtRootC7_35910 PF00005 ABC transporter NtRootC7_35910 PF08021 Siderophore-interacting FAD-binding domain NtRootC7_35910 PF04954 Siderophore-interacting protein NtRootC7_35910 PF00664 ABC transporter transmembrane region NtRootC7_35920 PF01804 Penicillin amidase NtRootC7_35950 PF00005 ABC transporter NtRootC7_35960 PF09819 ABC-type cobalt transport system, permease component NtRootC7_35990 PF03334 Na+/H+ antiporter subunit NtRootC7_36000 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NtRootC7_36020 PF00361 Proton-conducting membrane transporter NtRootC7_36030 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NtRootC7_36040 PF13244 Domain of unknown function (DUF4040) NtRootC7_36040 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NtRootC7_36040 PF00361 Proton-conducting membrane transporter NtRootC7_36040 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NtRootC7_36070 PF00999 Sodium/hydrogen exchanger family NtRootC7_36090 PF00692 dUTPase NtRootC7_36120 PF02557 D-alanyl-D-alanine carboxypeptidase NtRootC7_36140 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NtRootC7_36140 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NtRootC7_36150 PF05977 Transmembrane secretion effector NtRootC7_36160 PF03466 LysR substrate binding domain NtRootC7_36160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_36170 PF16363 GDP-mannose 4,6 dehydratase NtRootC7_36180 PF01022 Bacterial regulatory protein, arsR family NtRootC7_36210 PF01261 Xylose isomerase-like TIM barrel NtRootC7_36220 PF07859 alpha/beta hydrolase fold NtRootC7_36220 PF13472 GDSL-like Lipase/Acylhydrolase family NtRootC7_36230 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_36240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_36240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_36280 PF03631 Virulence factor BrkB NtRootC7_36290 PF00480 ROK family NtRootC7_36300 PF01261 Xylose isomerase-like TIM barrel NtRootC7_36310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootC7_36310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootC7_36320 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_36330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootC7_36330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootC7_36340 PF00596 Class II Aldolase and Adducin N-terminal domain NtRootC7_36350 PF11762 L-arabinose isomerase C-terminal domain NtRootC7_36350 PF02610 L-arabinose isomerase NtRootC7_36360 PF01263 Aldose 1-epimerase NtRootC7_36370 PF00135 Carboxylesterase family NtRootC7_36390 PF00480 ROK family NtRootC7_36390 PF01047 MarR family NtRootC7_36410 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_36420 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_36430 PF00005 ABC transporter NtRootC7_36450 PF01042 Endoribonuclease L-PSP NtRootC7_36480 PF03466 LysR substrate binding domain NtRootC7_36480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_36510 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_36520 PF05336 L-rhamnose mutarotase NtRootC7_36540 PF00596 Class II Aldolase and Adducin N-terminal domain NtRootC7_36550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NtRootC7_36550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NtRootC7_36560 PF02261 Aspartate decarboxylase NtRootC7_36580 PF00723 Glycosyl hydrolases family 15 NtRootC7_36590 PF00296 Luciferase-like monooxygenase NtRootC7_36600 PF00497 Bacterial extracellular solute-binding proteins, family 3 NtRootC7_36610 PF13291 ACT domain NtRootC7_36610 PF00291 Pyridoxal-phosphate dependent enzyme NtRootC7_36650 PF00296 Luciferase-like monooxygenase NtRootC7_36660 PF00296 Luciferase-like monooxygenase NtRootC7_36680 PF00296 Luciferase-like monooxygenase NtRootC7_36700 PF00005 ABC transporter NtRootC7_36710 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_36740 PF05872 Bacterial protein of unknown function (DUF853) NtRootC7_36760 PF00578 AhpC/TSA family NtRootC7_36760 PF02683 Cytochrome C biogenesis protein transmembrane region NtRootC7_36760 PF17991 Thioredoxin like C-terminal domain NtRootC7_36770 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) NtRootC7_36770 PF05425 Copper resistance protein D NtRootC7_36780 PF00216 Bacterial DNA-binding protein NtRootC7_36810 PF04542 Sigma-70 region 2 NtRootC7_36810 PF08281 Sigma-70, region 4 NtRootC7_36810 PF12680 SnoaL-like domain NtRootC7_36830 PF00253 Ribosomal protein S14p/S29e NtRootC7_36840 PF00471 Ribosomal protein L33 NtRootC7_36850 PF00830 Ribosomal L28 family NtRootC7_36860 PF00970 Oxidoreductase FAD-binding domain NtRootC7_36860 PF00042 Globin NtRootC7_36860 PF00175 Oxidoreductase NAD-binding domain NtRootC7_36940 PF08021 Siderophore-interacting FAD-binding domain NtRootC7_36940 PF04954 Siderophore-interacting protein NtRootC7_36950 PF00005 ABC transporter NtRootC7_36960 PF01032 FecCD transport family NtRootC7_36970 PF01032 FecCD transport family NtRootC7_37040 PF02770 Acyl-CoA dehydrogenase, middle domain NtRootC7_37040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NtRootC7_37040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NtRootC7_37070 PF01613 Flavin reductase like domain NtRootC7_37080 PF00248 Aldo/keto reductase family NtRootC7_37160 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_37160 PF07729 FCD domain NtRootC7_37180 PF10415 Fumarase C C-terminus NtRootC7_37180 PF00206 Lyase NtRootC7_37190 PF00324 Amino acid permease NtRootC7_37200 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_37200 PF07729 FCD domain NtRootC7_37220 PF00248 Aldo/keto reductase family NtRootC7_37230 PF05336 L-rhamnose mutarotase NtRootC7_37250 PF13378 Enolase C-terminal domain-like NtRootC7_37250 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NtRootC7_37260 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC7_37290 PF00004 ATPase family associated with various cellular activities (AAA) NtRootC7_37290 PF06480 FtsH Extracellular NtRootC7_37290 PF01434 Peptidase family M41 NtRootC7_37290 PF17862 AAA+ lid domain NtRootC7_37310 PF13291 ACT domain NtRootC7_37310 PF04607 Region found in RelA / SpoT proteins NtRootC7_37310 PF02824 TGS domain NtRootC7_37320 PF00106 short chain dehydrogenase NtRootC7_37330 PF02909 Tetracyclin repressor-like, C-terminal domain NtRootC7_37330 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_37340 PF00144 Beta-lactamase NtRootC7_37350 PF00749 tRNA synthetases class I (E and Q), catalytic domain NtRootC7_37390 PF01037 Lrp/AsnC ligand binding domain NtRootC7_37400 PF01810 LysE type translocator NtRootC7_37420 PF01022 Bacterial regulatory protein, arsR family NtRootC7_37460 PF00665 Integrase core domain NtRootC7_37460 PF13936 Helix-turn-helix domain NtRootC7_37470 PF00295 Glycosyl hydrolases family 28 NtRootC7_37480 PF13936 Helix-turn-helix domain NtRootC7_37480 PF00665 Integrase core domain NtRootC7_37490 PF09339 IclR helix-turn-helix domain NtRootC7_37490 PF01614 Bacterial transcriptional regulator NtRootC7_37500 PF00557 Metallopeptidase family M24 NtRootC7_37500 PF01321 Creatinase/Prolidase N-terminal domain NtRootC7_37510 PF08946 Osmosensory transporter coiled coil NtRootC7_37510 PF00083 Sugar (and other) transporter NtRootC7_37520 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_37520 PF07729 FCD domain NtRootC7_37530 PF00464 Serine hydroxymethyltransferase NtRootC7_37540 PF01266 FAD dependent oxidoreductase NtRootC7_37550 PF04267 Sarcosine oxidase, delta subunit family NtRootC7_37560 PF01571 Aminomethyltransferase folate-binding domain NtRootC7_37560 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC7_37560 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_37560 PF17806 Sarcosine oxidase A3 domain NtRootC7_37570 PF04268 Sarcosine oxidase, gamma subunit family NtRootC7_37580 PF03315 Serine dehydratase beta chain NtRootC7_37580 PF03313 Serine dehydratase alpha chain NtRootC7_37590 PF00551 Formyl transferase NtRootC7_37620 PF01522 Polysaccharide deacetylase NtRootC7_37630 PF13936 Helix-turn-helix domain NtRootC7_37630 PF00665 Integrase core domain NtRootC7_37650 PF03949 Malic enzyme, NAD binding domain NtRootC7_37650 PF00390 Malic enzyme, N-terminal domain NtRootC7_37660 PF17925 Tetracyclin repressor-like, C-terminal domain NtRootC7_37660 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_37710 PF03737 Aldolase/RraA NtRootC7_37720 PF07690 Major Facilitator Superfamily NtRootC7_37730 PF00083 Sugar (and other) transporter NtRootC7_37740 PF07690 Major Facilitator Superfamily NtRootC7_37750 PF01047 MarR family NtRootC7_37790 PF00005 ABC transporter NtRootC7_37790 PF13732 Domain of unknown function (DUF4162) NtRootC7_37810 PF00324 Amino acid permease NtRootC7_37820 PF01232 Mannitol dehydrogenase Rossmann domain NtRootC7_37820 PF08125 Mannitol dehydrogenase C-terminal domain NtRootC7_37830 PF02378 Phosphotransferase system, EIIC NtRootC7_37830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NtRootC7_37830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NtRootC7_37850 PF02896 PEP-utilising enzyme, TIM barrel domain NtRootC7_37850 PF00391 PEP-utilising enzyme, mobile domain NtRootC7_37850 PF05524 PEP-utilising enzyme, N-terminal NtRootC7_37890 PF00561 alpha/beta hydrolase fold NtRootC7_37910 PF04679 ATP dependent DNA ligase C terminal region NtRootC7_37910 PF01068 ATP dependent DNA ligase domain NtRootC7_37950 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NtRootC7_37950 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NtRootC7_37990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_37990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_38010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NtRootC7_38010 PF00005 ABC transporter NtRootC7_38020 PF12911 N-terminal TM domain of oligopeptide transport permease C NtRootC7_38020 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_38030 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_38040 PF00440 Bacterial regulatory proteins, tetR family NtRootC7_38040 PF17925 Tetracyclin repressor-like, C-terminal domain NtRootC7_38050 PF03358 NADPH-dependent FMN reductase NtRootC7_38100 PF00155 Aminotransferase class I and II NtRootC7_38140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NtRootC7_38140 PF00364 Biotin-requiring enzyme NtRootC7_38140 PF02817 e3 binding domain NtRootC7_38150 PF02779 Transketolase, pyrimidine binding domain NtRootC7_38150 PF02780 Transketolase, C-terminal domain NtRootC7_38160 PF00676 Dehydrogenase E1 component NtRootC7_38170 PF00155 Aminotransferase class I and II NtRootC7_38180 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NtRootC7_38210 PF08328 Adenylosuccinate lyase C-terminal NtRootC7_38210 PF00206 Lyase NtRootC7_38240 PF03061 Thioesterase superfamily NtRootC7_38250 PF00106 short chain dehydrogenase NtRootC7_38260 PF08946 Osmosensory transporter coiled coil NtRootC7_38260 PF00083 Sugar (and other) transporter NtRootC7_38270 PF02626 Carboxyltransferase domain, subdomain A and B NtRootC7_38280 PF02682 Carboxyltransferase domain, subdomain C and D NtRootC7_38290 PF03746 LamB/YcsF family NtRootC7_38300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_38300 PF03466 LysR substrate binding domain NtRootC7_38320 PF03737 Aldolase/RraA NtRootC7_38330 PF00155 Aminotransferase class I and II NtRootC7_38370 PF03328 HpcH/HpaI aldolase/citrate lyase family NtRootC7_38380 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC7_38390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootC7_38400 PF00171 Aldehyde dehydrogenase family NtRootC7_38410 PF07729 FCD domain NtRootC7_38410 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_38420 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC7_38450 PF04226 Transglycosylase associated protein NtRootC7_38480 PF12833 Helix-turn-helix domain NtRootC7_38480 PF06445 GyrI-like small molecule binding domain NtRootC7_38520 PF06724 Domain of Unknown Function (DUF1206) NtRootC7_38550 PF03780 Asp23 family, cell envelope-related function NtRootC7_38610 PF08281 Sigma-70, region 4 NtRootC7_38610 PF04542 Sigma-70 region 2 NtRootC7_38650 PF00512 His Kinase A (phospho-acceptor) domain NtRootC7_38650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_38660 PF03793 PASTA domain NtRootC7_38660 PF00069 Protein kinase domain NtRootC7_38670 PF00300 Histidine phosphatase superfamily (branch 1) NtRootC7_38700 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NtRootC7_38710 PF00723 Glycosyl hydrolases family 15 NtRootC7_38730 PF00282 Pyridoxal-dependent decarboxylase conserved domain NtRootC7_38750 PF13419 Haloacid dehalogenase-like hydrolase NtRootC7_38780 PF01494 FAD binding domain NtRootC7_38790 PF01614 Bacterial transcriptional regulator NtRootC7_38790 PF09339 IclR helix-turn-helix domain NtRootC7_38800 PF07690 Major Facilitator Superfamily NtRootC7_38860 PF04226 Transglycosylase associated protein NtRootC7_38870 PF00069 Protein kinase domain NtRootC7_38870 PF03793 PASTA domain NtRootC7_38890 PF01047 MarR family NtRootC7_38950 PF04055 Radical SAM superfamily NtRootC7_38950 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NtRootC7_38960 PF03313 Serine dehydratase alpha chain NtRootC7_38960 PF03315 Serine dehydratase beta chain NtRootC7_38970 PF00464 Serine hydroxymethyltransferase NtRootC7_38980 PF01597 Glycine cleavage H-protein NtRootC7_38990 PF01571 Aminomethyltransferase folate-binding domain NtRootC7_38990 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC7_39000 PF02347 Glycine cleavage system P-protein NtRootC7_39010 PF13556 PucR C-terminal helix-turn-helix domain NtRootC7_39020 PF00083 Sugar (and other) transporter NtRootC7_39030 PF00491 Arginase family NtRootC7_39040 PF01741 Large-conductance mechanosensitive channel, MscL NtRootC7_39090 PF02233 NAD(P) transhydrogenase beta subunit NtRootC7_39100 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NtRootC7_39110 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NtRootC7_39110 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NtRootC7_39120 PF03358 NADPH-dependent FMN reductase NtRootC7_39350 PF13419 Haloacid dehalogenase-like hydrolase NtRootC7_39370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NtRootC7_39370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NtRootC7_39420 PF13936 Helix-turn-helix domain NtRootC7_39420 PF00665 Integrase core domain NtRootC7_39430 PF07690 Major Facilitator Superfamily NtRootC7_39440 PF01494 FAD binding domain NtRootC7_39450 PF13193 AMP-binding enzyme C-terminal domain NtRootC7_39450 PF00501 AMP-binding enzyme NtRootC7_39480 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC7_39490 PF01042 Endoribonuclease L-PSP NtRootC7_39510 PF09339 IclR helix-turn-helix domain NtRootC7_39510 PF01614 Bacterial transcriptional regulator NtRootC7_39520 PF01144 Coenzyme A transferase NtRootC7_39530 PF01144 Coenzyme A transferase NtRootC7_39540 PF00108 Thiolase, N-terminal domain NtRootC7_39540 PF02803 Thiolase, C-terminal domain NtRootC7_39550 PF02627 Carboxymuconolactone decarboxylase family NtRootC7_39560 PF00561 alpha/beta hydrolase fold NtRootC7_39560 PF08386 TAP-like protein NtRootC7_39570 PF00206 Lyase NtRootC7_39570 PF10397 Adenylosuccinate lyase C-terminus NtRootC7_39580 PF04444 Catechol dioxygenase N terminus NtRootC7_39580 PF00775 Dioxygenase NtRootC7_39590 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NtRootC7_39590 PF00775 Dioxygenase NtRootC7_39600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NtRootC7_39600 PF01261 Xylose isomerase-like TIM barrel NtRootC7_39610 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NtRootC7_39610 PF08501 Shikimate dehydrogenase substrate binding domain NtRootC7_39620 PF09339 IclR helix-turn-helix domain NtRootC7_39620 PF01614 Bacterial transcriptional regulator NtRootC7_39630 PF00083 Sugar (and other) transporter NtRootC7_39660 PF02597 ThiS family NtRootC7_39680 PF00990 Diguanylate cyclase, GGDEF domain NtRootC7_39680 PF05230 MASE2 domain NtRootC7_39710 PF07690 Major Facilitator Superfamily NtRootC7_39720 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootC7_39720 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootC7_39720 PF14310 Fibronectin type III-like domain NtRootC7_39720 PF07691 PA14 domain NtRootC7_39740 PF03466 LysR substrate binding domain NtRootC7_39740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NtRootC7_39810 PF02447 GntP family permease NtRootC7_39820 PF01081 KDPG and KHG aldolase NtRootC7_39830 PF07969 Amidohydrolase family NtRootC7_39850 PF00294 pfkB family carbohydrate kinase NtRootC7_39860 PF09339 IclR helix-turn-helix domain NtRootC7_39860 PF01614 Bacterial transcriptional regulator NtRootC7_39870 PF01042 Endoribonuclease L-PSP NtRootC7_39880 PF00795 Carbon-nitrogen hydrolase NtRootC7_39880 PF00535 Glycosyl transferase family 2 NtRootC7_39960 PF03976 Polyphosphate kinase 2 (PPK2) NtRootC7_39980 PF01418 Helix-turn-helix domain, rpiR family NtRootC7_39980 PF01380 SIS domain NtRootC7_39990 PF07075 Protein of unknown function (DUF1343) NtRootC7_40000 PF01915 Glycosyl hydrolase family 3 C-terminal domain NtRootC7_40000 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootC7_40040 PF02583 Metal-sensitive transcriptional repressor NtRootC7_40050 PF00403 Heavy-metal-associated domain NtRootC7_40060 PF00403 Heavy-metal-associated domain NtRootC7_40160 PF01554 MatE NtRootC7_40180 PF07681 DoxX NtRootC7_40210 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NtRootC7_40210 PF00391 PEP-utilising enzyme, mobile domain NtRootC7_40230 PF03061 Thioesterase superfamily NtRootC7_40260 PF02779 Transketolase, pyrimidine binding domain NtRootC7_40260 PF02780 Transketolase, C-terminal domain NtRootC7_40270 PF00456 Transketolase, thiamine diphosphate binding domain NtRootC7_40280 PF00083 Sugar (and other) transporter NtRootC7_40310 PF02734 DAK2 domain NtRootC7_40310 PF02733 Dak1 domain NtRootC7_40320 PF02502 Ribose/Galactose Isomerase NtRootC7_40350 PF00772 DnaB-like helicase N terminal domain NtRootC7_40350 PF03796 DnaB-like helicase C terminal domain NtRootC7_40390 PF03358 NADPH-dependent FMN reductase NtRootC7_40410 PF00135 Carboxylesterase family NtRootC7_40430 PF02515 CoA-transferase family III NtRootC7_40440 PF00682 HMGL-like NtRootC7_40510 PF00005 ABC transporter NtRootC7_40530 PF02567 Phenazine biosynthesis-like protein NtRootC7_40550 PF13936 Helix-turn-helix domain NtRootC7_40550 PF00665 Integrase core domain NtRootC7_40560 PF03948 Ribosomal protein L9, C-terminal domain NtRootC7_40560 PF01281 Ribosomal protein L9, N-terminal domain NtRootC7_40570 PF01084 Ribosomal protein S18 NtRootC7_40580 PF00436 Single-strand binding protein family NtRootC7_40590 PF01250 Ribosomal protein S6 NtRootC7_40620 PF00324 Amino acid permease NtRootC7_40630 PF02127 Aminopeptidase I zinc metalloprotease (M18) NtRootC7_40690 PF00842 Alanine racemase, C-terminal domain NtRootC7_40690 PF01168 Alanine racemase, N-terminal domain NtRootC7_40700 PF00324 Amino acid permease NtRootC7_40710 PF00196 Bacterial regulatory proteins, luxR family NtRootC7_40710 PF00072 Response regulator receiver domain NtRootC7_40720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NtRootC7_40720 PF07730 Histidine kinase NtRootC7_40740 PF00005 ABC transporter NtRootC7_40750 PF00781 Diacylglycerol kinase catalytic domain NtRootC7_40770 PF07690 Major Facilitator Superfamily NtRootC7_40780 PF08220 DeoR-like helix-turn-helix domain NtRootC7_40780 PF00455 DeoR C terminal sensor domain NtRootC7_40790 PF12848 ABC transporter NtRootC7_40790 PF00005 ABC transporter NtRootC7_40800 PF01494 FAD binding domain NtRootC7_40810 PF00905 Penicillin binding protein transpeptidase domain NtRootC7_40820 PF17137 Domain of unknown function (DUF5110) NtRootC7_40820 PF01055 Glycosyl hydrolases family 31 NtRootC7_40820 PF16338 Domain of unknown function (DUF4968) NtRootC7_40830 PF00072 Response regulator receiver domain NtRootC7_40830 PF00196 Bacterial regulatory proteins, luxR family NtRootC7_40840 PF07730 Histidine kinase NtRootC7_40860 PF00005 ABC transporter NtRootC7_40870 PF01638 HxlR-like helix-turn-helix NtRootC7_40880 PF13460 NAD(P)H-binding NtRootC7_40920 PF00300 Histidine phosphatase superfamily (branch 1) NtRootC7_40930 PF01743 Poly A polymerase head domain NtRootC7_40930 PF01966 HD domain NtRootC7_40930 PF12627 Probable RNA and SrmB- binding site of polymerase A NtRootC7_40940 PF00293 NUDIX domain NtRootC7_40950 PF03023 Lipid II flippase MurJ NtRootC7_40970 PF07992 Pyridine nucleotide-disulphide oxidoreductase NtRootC7_40980 PF00085 Thioredoxin NtRootC7_41010 PF17762 HTH domain found in ParB protein NtRootC7_41010 PF02195 ParB-like nuclease domain NtRootC7_41020 PF13614 AAA domain NtRootC7_41030 PF02527 rRNA small subunit methyltransferase G NtRootC7_41050 PF02096 60Kd inner membrane protein NtRootC7_41060 PF01809 Putative membrane protein insertion efficiency factor NtRootC7_41070 PF00825 Ribonuclease P NtRootC7_41080 PF00468 Ribosomal protein L34 NtRootC7_41090 PF17762 HTH domain found in ParB protein NtRootC7_41090 PF02195 ParB-like nuclease domain NtRootC7_41130 PF00436 Single-strand binding protein family NtRootC7_41210 PF04294 VanW like protein NtRootC7_41280 PF02156 Glycosyl hydrolase family 26 NtRootC7_41320 PF07729 FCD domain NtRootC7_41320 PF00392 Bacterial regulatory proteins, gntR family NtRootC7_41330 PF00005 ABC transporter NtRootC7_41340 PF02653 Branched-chain amino acid transport system / permease component NtRootC7_41350 PF02653 Branched-chain amino acid transport system / permease component NtRootC7_41370 PF13936 Helix-turn-helix domain NtRootC7_41370 PF00665 Integrase core domain NtRootC7_41400 PF00732 GMC oxidoreductase NtRootC7_41400 PF05199 GMC oxidoreductase NtRootC7_41410 PF00171 Aldehyde dehydrogenase family NtRootC7_41420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NtRootC7_41420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NtRootC7_41460 PF02595 Glycerate kinase family NtRootC7_41480 PF00271 Helicase conserved C-terminal domain NtRootC7_41530 PF02899 Phage integrase, N-terminal SAM-like domain NtRootC7_41530 PF00589 Phage integrase family NtRootC7_41540 PF00589 Phage integrase family NtRootC7_41540 PF02899 Phage integrase, N-terminal SAM-like domain NtRootC7_41580 PF03358 NADPH-dependent FMN reductase NtRootC7_41600 PF01593 Flavin containing amine oxidoreductase NtRootC7_41630 PF00171 Aldehyde dehydrogenase family NtRootC7_41640 PF01557 Fumarylacetoacetate (FAA) hydrolase family NtRootC7_41650 PF00893 Small Multidrug Resistance protein NtRootC7_41660 PF00893 Small Multidrug Resistance protein NtRootC7_41670 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NtRootC7_41670 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NtRootC7_41680 PF16350 FAD dependent oxidoreductase central domain NtRootC7_41680 PF01571 Aminomethyltransferase folate-binding domain NtRootC7_41680 PF08669 Glycine cleavage T-protein C-terminal barrel domain NtRootC7_41680 PF01266 FAD dependent oxidoreductase NtRootC7_41690 PF00551 Formyl transferase NtRootC7_41720 PF13556 PucR C-terminal helix-turn-helix domain NtRootC7_41720 PF07905 Purine catabolism regulatory protein-like family NtRootC7_41780 PF02625 XdhC and CoxI family NtRootC7_41780 PF13478 XdhC Rossmann domain NtRootC7_41810 PF00795 Carbon-nitrogen hydrolase NtRootC7_41830 PF01494 FAD binding domain NtRootC7_41860 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NtRootC7_41860 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NtRootC7_41870 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NtRootC7_41910 PF03450 CO dehydrogenase flavoprotein C-terminal domain NtRootC7_41910 PF00941 FAD binding domain in molybdopterin dehydrogenase NtRootC7_41940 PF01593 Flavin containing amine oxidoreductase NtRootC7_41950 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NtRootC7_41950 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NtRootC7_41960 PF00111 2Fe-2S iron-sulfur cluster binding domain NtRootC7_41960 PF01799 [2Fe-2S] binding domain NtRootC7_41990 PF00665 Integrase core domain NtRootC7_42020 PF04055 Radical SAM superfamily NtRootC7_42020 PF06463 Molybdenum Cofactor Synthesis C NtRootC7_42030 PF00994 Probable molybdopterin binding domain NtRootC7_42030 PF03453 MoeA N-terminal region (domain I and II) NtRootC7_42030 PF03454 MoeA C-terminal region (domain IV) NtRootC7_42040 PF01967 MoaC family NtRootC7_42050 PF02391 MoaE protein NtRootC7_42070 PF00528 Binding-protein-dependent transport system inner membrane component NtRootC7_42080 PF00005 ABC transporter NtRootC7_42080 PF03459 TOBE domain NtRootC7_42110 PF00933 Glycosyl hydrolase family 3 N terminal domain NtRootC7_42130 PF00356 Bacterial regulatory proteins, lacI family NtRootC7_42160 PF08031 Berberine and berberine like NtRootC7_42160 PF01565 FAD binding domain NtRootC7_42470 PF13614 AAA domain NtRootC7_42520 PF09299 Mu transposase, C-terminal NtRootC7_42520 PF00665 Integrase core domain NtRootC7_42530 PF13401 AAA domain NtRootC7_42540 PF02796 Helix-turn-helix domain of resolvase NtRootC7_42540 PF00239 Resolvase, N terminal domain NtRootC7_42600 PF04679 ATP dependent DNA ligase C terminal region NtRootC7_42600 PF01068 ATP dependent DNA ligase domain NtRootC7_42630 PF12697 Alpha/beta hydrolase family NtRootC7_42650 PF07859 alpha/beta hydrolase fold NtRootC7_42660 PF00083 Sugar (and other) transporter NtRootC7_42670 PF00356 Bacterial regulatory proteins, lacI family