locus-tag class description KY499_00035 PF00535 Glycosyl transferase family 2 KY499_00045 PF04542 Sigma-70 region 2 KY499_00045 PF04545 Sigma-70, region 4 KY499_00055 PF16123 Hydroxyacylglutathione hydrolase C-terminus KY499_00055 PF00753 Metallo-beta-lactamase superfamily KY499_00060 PF01557 Fumarylacetoacetate (FAA) hydrolase family KY499_00075 PF13419 Haloacid dehalogenase-like hydrolase KY499_00105 PF09339 IclR helix-turn-helix domain KY499_00105 PF01614 Bacterial transcriptional regulator KY499_00110 PF00330 Aconitase family (aconitate hydratase) KY499_00115 PF00694 Aconitase C-terminal domain KY499_00125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KY499_00135 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KY499_00135 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KY499_00140 PF07478 D-ala D-ala ligase C-terminus KY499_00140 PF01820 D-ala D-ala ligase N-terminus KY499_00175 PF00005 ABC transporter KY499_00185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KY499_00185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KY499_00185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KY499_00200 PF00535 Glycosyl transferase family 2 KY499_00225 PF00535 Glycosyl transferase family 2 KY499_00260 PF01695 IstB-like ATP binding protein KY499_00330 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KY499_00330 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KY499_00330 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KY499_00365 PF02350 UDP-N-acetylglucosamine 2-epimerase KY499_00410 PF00155 Aminotransferase class I and II KY499_00415 PF01467 Cytidylyltransferase-like KY499_00420 PF02620 Large ribosomal RNA subunit accumulation protein YceD KY499_00425 PF01783 Ribosomal L32p protein family KY499_00430 PF00035 Double-stranded RNA binding motif KY499_00430 PF14622 Ribonuclease-III-like KY499_00435 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KY499_00435 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KY499_00435 PF06827 Zinc finger found in FPG and IleRS KY499_00440 PF06470 SMC proteins Flexible Hinge Domain KY499_00440 PF02463 RecF/RecN/SMC N terminal domain KY499_00445 PF00448 SRP54-type protein, GTPase domain KY499_00445 PF02881 SRP54-type protein, helical bundle domain KY499_00460 PF07690 Major Facilitator Superfamily KY499_00460 PF00083 Sugar (and other) transporter KY499_00465 PF00909 Ammonium Transporter Family KY499_00470 PF00543 Nitrogen regulatory protein P-II KY499_00475 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KY499_00475 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KY499_00480 PF02978 Signal peptide binding domain KY499_00480 PF00448 SRP54-type protein, GTPase domain KY499_00480 PF02881 SRP54-type protein, helical bundle domain KY499_00490 PF13667 ThiC-associated domain KY499_00490 PF01964 Radical SAM ThiC family KY499_00495 PF01979 Amidohydrolase family KY499_00500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KY499_00510 PF00563 EAL domain KY499_00510 PF00990 Diguanylate cyclase, GGDEF domain KY499_00510 PF03707 Bacterial signalling protein N terminal repeat KY499_00515 PF00886 Ribosomal protein S16 KY499_00525 PF01782 RimM N-terminal domain KY499_00525 PF05239 PRC-barrel domain KY499_00535 PF01245 Ribosomal protein L19 KY499_00540 PF10502 Signal peptidase, peptidase S26 KY499_00545 PF10502 Signal peptidase, peptidase S26 KY499_00550 PF01351 Ribonuclease HII KY499_00555 PF10611 Protein of unknown function (DUF2469) KY499_00565 PF02021 Uncharacterised protein family UPF0102 KY499_00575 PF17782 DprA winged helix domain KY499_00575 PF02481 DNA recombination-mediator protein A KY499_00580 PF00589 Phage integrase family KY499_00580 PF02899 Phage integrase, N-terminal SAM-like domain KY499_00590 PF02801 Beta-ketoacyl synthase, C-terminal domain KY499_00590 PF00109 Beta-ketoacyl synthase, N-terminal domain KY499_00595 PF00550 Phosphopantetheine attachment site KY499_00600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KY499_00600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KY499_00605 PF00698 Acyl transferase domain KY499_00610 PF17853 GGDEF-like domain KY499_00610 PF13556 PucR C-terminal helix-turn-helix domain KY499_00620 PF11253 Protein of unknown function (DUF3052) KY499_00625 PF00578 AhpC/TSA family KY499_00630 PF02146 Sir2 family KY499_00650 PF07729 FCD domain KY499_00650 PF00392 Bacterial regulatory proteins, gntR family KY499_00655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KY499_00655 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KY499_00660 PF06426 Serine acetyltransferase, N-terminal KY499_00660 PF00132 Bacterial transferase hexapeptide (six repeats) KY499_00665 PF00291 Pyridoxal-phosphate dependent enzyme KY499_00670 PF01625 Peptide methionine sulfoxide reductase KY499_00675 PF01784 NIF3 (NGG1p interacting factor 3) KY499_00680 PF02591 C4-type zinc ribbon domain KY499_00685 PF03883 Peroxide stress protein YaaA KY499_00695 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KY499_00695 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KY499_00710 PF00294 pfkB family carbohydrate kinase KY499_00720 PF01327 Polypeptide deformylase KY499_00725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KY499_00725 PF02770 Acyl-CoA dehydrogenase, middle domain KY499_00725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KY499_00735 PF00929 Exonuclease KY499_00765 PF03780 Asp23 family, cell envelope-related function KY499_00770 PF08281 Sigma-70, region 4 KY499_00770 PF04542 Sigma-70 region 2 KY499_00790 PF00557 Metallopeptidase family M24 KY499_00800 PF00436 Single-strand binding protein family KY499_00805 PF12848 ABC transporter KY499_00805 PF00005 ABC transporter KY499_00820 PF01152 Bacterial-like globin KY499_00825 PF00924 Mechanosensitive ion channel KY499_00845 PF02502 Ribose/Galactose Isomerase KY499_00850 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KY499_00850 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KY499_00850 PF06827 Zinc finger found in FPG and IleRS KY499_00865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KY499_00865 PF05698 Bacterial trigger factor protein (TF) C-terminus KY499_00865 PF05697 Bacterial trigger factor protein (TF) KY499_00870 PF00574 Clp protease KY499_00875 PF00574 Clp protease KY499_00880 PF07724 AAA domain (Cdc48 subfamily) KY499_00880 PF10431 C-terminal, D2-small domain, of ClpB protein KY499_00880 PF06689 ClpX C4-type zinc finger KY499_00885 PF01323 DSBA-like thioredoxin domain KY499_00910 PF08264 Anticodon-binding domain of tRNA KY499_00910 PF00133 tRNA synthetases class I (I, L, M and V) KY499_00915 PF01235 Sodium:alanine symporter family KY499_00920 PF00106 short chain dehydrogenase KY499_00930 PF00561 alpha/beta hydrolase fold KY499_00935 PF00133 tRNA synthetases class I (I, L, M and V) KY499_00935 PF08264 Anticodon-binding domain of tRNA KY499_00940 PF02875 Mur ligase family, glutamate ligase domain KY499_00940 PF08245 Mur ligase middle domain KY499_00950 PF00334 Nucleoside diphosphate kinase KY499_00965 PF08543 Phosphomethylpyrimidine kinase KY499_00965 PF03070 TENA/THI-4/PQQC family KY499_00965 PF02581 Thiamine monophosphate synthase KY499_00970 PF00829 Ribosomal prokaryotic L21 protein KY499_00975 PF01016 Ribosomal L27 protein KY499_00980 PF09269 Domain of unknown function (DUF1967) KY499_00980 PF01018 GTP1/OBG KY499_00980 PF01926 50S ribosome-binding GTPase KY499_00985 PF00696 Amino acid kinase family KY499_00985 PF01472 PUA domain KY499_01000 PF01467 Cytidylyltransferase-like KY499_01025 PF03831 PhnA domain KY499_01025 PF08274 PhnA Zinc-Ribbon KY499_01030 PF05175 Methyltransferase small domain KY499_01030 PF08468 Methyltransferase small domain N-terminal KY499_01035 PF00480 ROK family KY499_01040 PF13416 Bacterial extracellular solute-binding protein KY499_01045 PF00528 Binding-protein-dependent transport system inner membrane component KY499_01055 PF00135 Carboxylesterase family KY499_01075 PF02219 Methylenetetrahydrofolate reductase KY499_01080 PF08267 Cobalamin-independent synthase, N-terminal domain KY499_01080 PF01717 Cobalamin-independent synthase, Catalytic domain KY499_01100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY499_01100 PF03466 LysR substrate binding domain KY499_01125 PF07972 NrdI Flavodoxin like KY499_01130 PF00317 Ribonucleotide reductase, all-alpha domain KY499_01130 PF08343 Ribonucleotide reductase N-terminal KY499_01130 PF02867 Ribonucleotide reductase, barrel domain KY499_01135 PF00268 Ribonucleotide reductase, small chain KY499_01145 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KY499_01160 PF05661 Protein of unknown function (DUF808) KY499_01165 PF13443 Cro/C1-type HTH DNA-binding domain KY499_01180 PF13847 Methyltransferase domain KY499_01190 PF00392 Bacterial regulatory proteins, gntR family KY499_01190 PF07729 FCD domain KY499_01200 PF00171 Aldehyde dehydrogenase family KY499_01205 PF04030 D-arabinono-1,4-lactone oxidase KY499_01205 PF01565 FAD binding domain KY499_01210 PF04346 Ethanolamine utilisation protein, EutH KY499_01235 PF01434 Peptidase family M41 KY499_01235 PF00004 ATPase family associated with various cellular activities (AAA) KY499_01235 PF17862 AAA+ lid domain KY499_01255 PF01738 Dienelactone hydrolase family KY499_01275 PF01494 FAD binding domain KY499_01280 PF00582 Universal stress protein family KY499_01295 PF00561 alpha/beta hydrolase fold KY499_01300 PF06772 Bacterial low temperature requirement A protein (LtrA) KY499_01305 PF03435 Saccharopine dehydrogenase NADP binding domain KY499_01345 PF01740 STAS domain KY499_01345 PF00916 Sulfate permease family KY499_01355 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain KY499_01405 PF00753 Metallo-beta-lactamase superfamily KY499_01410 PF00107 Zinc-binding dehydrogenase KY499_01410 PF08240 Alcohol dehydrogenase GroES-like domain KY499_01415 PF00462 Glutaredoxin KY499_01420 PF02586 SOS response associated peptidase (SRAP) KY499_01430 PF01842 ACT domain KY499_01430 PF01817 Chorismate mutase type II KY499_01430 PF00800 Prephenate dehydratase KY499_01460 PF01230 HIT domain KY499_01470 PF01680 SOR/SNZ family KY499_01475 PF01432 Peptidase family M3 KY499_01515 PF00486 Transcriptional regulatory protein, C terminal KY499_01515 PF00931 NB-ARC domain KY499_01515 PF03704 Bacterial transcriptional activator domain KY499_01520 PF07730 Histidine kinase KY499_01520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_01530 PF10502 Signal peptidase, peptidase S26 KY499_01535 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KY499_01545 PF07685 CobB/CobQ-like glutamine amidotransferase domain KY499_01550 PF08245 Mur ligase middle domain KY499_01550 PF08353 Domain of unknown function (DUF1727) KY499_01555 PF01174 SNO glutamine amidotransferase family KY499_01560 PF01709 Transcriptional regulator KY499_01565 PF02075 Crossover junction endodeoxyribonuclease RuvC KY499_01570 PF07499 RuvA, C-terminal domain KY499_01570 PF01330 RuvA N terminal domain KY499_01575 PF17864 RuvB AAA lid domain KY499_01575 PF05496 Holliday junction DNA helicase RuvB P-loop domain KY499_01575 PF05491 RuvB C-terminal winged helix domain KY499_01585 PF07549 SecD/SecF GG Motif KY499_01585 PF02355 Protein export membrane protein KY499_01590 PF07549 SecD/SecF GG Motif KY499_01590 PF02355 Protein export membrane protein KY499_01595 PF13291 ACT domain KY499_01595 PF02824 TGS domain KY499_01595 PF04607 Region found in RelA / SpoT proteins KY499_01605 PF03993 Domain of Unknown Function (DUF349) KY499_01615 PF13393 Histidyl-tRNA synthetase KY499_01615 PF03129 Anticodon binding domain KY499_01620 PF13520 Amino acid permease KY499_01625 PF01336 OB-fold nucleic acid binding domain KY499_01625 PF00152 tRNA synthetases class II (D, K and N) KY499_01625 PF02938 GAD domain KY499_01640 PF01022 Bacterial regulatory protein, arsR family KY499_01645 PF01758 Sodium Bile acid symporter family KY499_01650 PF01451 Low molecular weight phosphotyrosine protein phosphatase KY499_01665 PF12002 MgsA AAA+ ATPase C terminal KY499_01665 PF16193 AAA C-terminal domain KY499_01665 PF00004 ATPase family associated with various cellular activities (AAA) KY499_01675 PF01479 S4 domain KY499_01675 PF00163 Ribosomal protein S4/S9 N-terminal domain KY499_01690 PF01411 tRNA synthetases class II (A) KY499_01690 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KY499_01690 PF02272 DHHA1 domain KY499_01695 PF03652 Holliday junction resolvase KY499_01705 PF08501 Shikimate dehydrogenase substrate binding domain KY499_01705 PF01488 Shikimate / quinate 5-dehydrogenase KY499_01705 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KY499_01710 PF01264 Chorismate synthase KY499_01715 PF01202 Shikimate kinase KY499_01720 PF01761 3-dehydroquinate synthase KY499_01730 PF09285 Elongation factor P, C-terminal KY499_01730 PF01132 Elongation factor P (EF-P) OB domain KY499_01730 PF08207 Elongation factor P (EF-P) KOW-like domain KY499_01735 PF01029 NusB family KY499_01745 PF00156 Phosphoribosyl transferase domain KY499_01750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KY499_01750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KY499_01755 PF01979 Amidohydrolase family KY499_01765 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KY499_01765 PF00117 Glutamine amidotransferase class-I KY499_01770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KY499_01770 PF02142 MGS-like domain KY499_01770 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KY499_01775 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KY499_01780 PF00625 Guanylate kinase KY499_01790 PF01192 RNA polymerase Rpb6 KY499_01795 PF02441 Flavoprotein KY499_01795 PF04127 DNA / pantothenate metabolism flavoprotein KY499_01800 PF00438 S-adenosylmethionine synthetase, N-terminal domain KY499_01800 PF02772 S-adenosylmethionine synthetase, central domain KY499_01800 PF02773 S-adenosylmethionine synthetase, C-terminal domain KY499_01805 PF17764 3′ DNA-binding domain (3′BD) KY499_01815 PF05728 Uncharacterised protein family (UPF0227) KY499_01830 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KY499_01830 PF01266 FAD dependent oxidoreductase KY499_01835 PF00230 Major intrinsic protein KY499_01840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KY499_01840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KY499_01850 PF00873 AcrB/AcrD/AcrF family KY499_01860 PF00873 AcrB/AcrD/AcrF family KY499_01865 PF09334 tRNA synthetases class I (M) KY499_01865 PF08264 Anticodon-binding domain of tRNA KY499_01865 PF13603 Leucyl-tRNA synthetase, Domain 2 KY499_01865 PF00133 tRNA synthetases class I (I, L, M and V) KY499_01870 PF02645 Uncharacterised protein, DegV family COG1307 KY499_01895 PF01649 Ribosomal protein S20 KY499_01910 PF04055 Radical SAM superfamily KY499_01925 PF01628 HrcA protein C terminal domain KY499_01925 PF08220 DeoR-like helix-turn-helix domain KY499_01930 PF00226 DnaJ domain KY499_01930 PF01556 DnaJ C terminal domain KY499_01930 PF00684 DnaJ central domain KY499_01935 PF04452 RNA methyltransferase KY499_01945 PF02562 PhoH-like protein KY499_01950 PF02130 Uncharacterized protein family UPF0054 KY499_01960 PF07650 KH domain KY499_01960 PF01926 50S ribosome-binding GTPase KY499_01965 PF13399 LytR cell envelope-related transcriptional attenuator KY499_01965 PF03816 Cell envelope-related transcriptional attenuator domain KY499_01975 PF02770 Acyl-CoA dehydrogenase, middle domain KY499_01975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KY499_01975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KY499_01990 PF04055 Radical SAM superfamily KY499_01990 PF06463 Molybdenum Cofactor Synthesis C KY499_01995 PF05649 Peptidase family M13 KY499_01995 PF01431 Peptidase family M13 KY499_02000 PF08502 LeuA allosteric (dimerisation) domain KY499_02000 PF00682 HMGL-like KY499_02005 PF11967 Recombination protein O N terminal KY499_02005 PF02565 Recombination protein O C terminal KY499_02010 PF01255 Putative undecaprenyl diphosphate synthase KY499_02025 PF01180 Dihydroorotate dehydrogenase KY499_02035 PF01546 Peptidase family M20/M25/M40 KY499_02035 PF07687 Peptidase dimerisation domain KY499_02040 PF01521 Iron-sulphur cluster biosynthesis KY499_02045 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KY499_02055 PF12270 Cytochrome c oxidase subunit IV KY499_02065 PF07729 FCD domain KY499_02065 PF00392 Bacterial regulatory proteins, gntR family KY499_02070 PF13631 Cytochrome b(N-terminal)/b6/petB KY499_02075 PF00355 Rieske [2Fe-2S] domain KY499_02080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KY499_02080 PF00034 Cytochrome c KY499_02085 PF00510 Cytochrome c oxidase subunit III KY499_02090 PF02885 Glycosyl transferase family, helical bundle domain KY499_02090 PF00591 Glycosyl transferase family, a/b domain KY499_02115 PF16363 GDP-mannose 4,6 dehydratase KY499_02120 PF00288 GHMP kinases N terminal domain KY499_02120 PF08544 GHMP kinases C terminal KY499_02120 PF10509 Galactokinase galactose-binding signature KY499_02150 PF03707 Bacterial signalling protein N terminal repeat KY499_02150 PF00990 Diguanylate cyclase, GGDEF domain KY499_02150 PF00563 EAL domain KY499_02160 PF00072 Response regulator receiver domain KY499_02160 PF00486 Transcriptional regulatory protein, C terminal KY499_02165 PF00672 HAMP domain KY499_02165 PF00512 His Kinase A (phospho-acceptor) domain KY499_02165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_02190 PF01300 Telomere recombination KY499_02225 PF00582 Universal stress protein family KY499_02235 PF00528 Binding-protein-dependent transport system inner membrane component KY499_02240 PF00571 CBS domain KY499_02240 PF00005 ABC transporter KY499_02250 PF01384 Phosphate transporter family KY499_02270 PF00476 DNA polymerase family A KY499_02270 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KY499_02270 PF01367 5'-3' exonuclease, C-terminal SAM fold KY499_02295 PF01205 Uncharacterized protein family UPF0029 KY499_02295 PF09186 Domain of unknown function (DUF1949) KY499_02300 PF04229 GrpB protein KY499_02300 PF01121 Dephospho-CoA kinase KY499_02305 PF02151 UvrB/uvrC motif KY499_02305 PF04851 Type III restriction enzyme, res subunit KY499_02305 PF12344 Ultra-violet resistance protein B KY499_02305 PF00271 Helicase conserved C-terminal domain KY499_02305 PF17757 UvrB interaction domain KY499_02310 PF03741 Integral membrane protein TerC family KY499_02315 PF00561 alpha/beta hydrolase fold KY499_02330 PF13649 Methyltransferase domain KY499_02335 PF00664 ABC transporter transmembrane region KY499_02335 PF00005 ABC transporter KY499_02340 PF00664 ABC transporter transmembrane region KY499_02340 PF00005 ABC transporter KY499_02360 PF01553 Acyltransferase KY499_02360 PF00501 AMP-binding enzyme KY499_02365 PF01541 GIY-YIG catalytic domain KY499_02365 PF08459 UvrC Helix-hairpin-helix N-terminal KY499_02365 PF02151 UvrB/uvrC motif KY499_02370 PF03668 P-loop ATPase protein family KY499_02375 PF01933 Uncharacterised protein family UPF0052 KY499_02380 PF02650 WhiA C-terminal HTH domain KY499_02380 PF10298 WhiA N-terminal LAGLIDADG-like domain KY499_02380 PF14527 WhiA LAGLIDADG-like domain KY499_02385 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KY499_02385 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KY499_02390 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KY499_02390 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KY499_02400 PF00121 Triosephosphate isomerase KY499_02405 PF03840 Preprotein translocase SecG subunit KY499_02415 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KY499_02425 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KY499_02425 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KY499_02430 PF00342 Phosphoglucose isomerase KY499_02435 PF00923 Transaldolase/Fructose-6-phosphate aldolase KY499_02445 PF01040 UbiA prenyltransferase family KY499_02450 PF02628 Cytochrome oxidase assembly protein KY499_02460 PF00005 ABC transporter KY499_02470 PF01458 Uncharacterized protein family (UPF0051) KY499_02475 PF01458 Uncharacterized protein family (UPF0051) KY499_02485 PF00005 ABC transporter KY499_02490 PF01883 Iron-sulfur cluster assembly protein KY499_02500 PF04228 Putative neutral zinc metallopeptidase KY499_02505 PF13193 AMP-binding enzyme C-terminal domain KY499_02505 PF00501 AMP-binding enzyme KY499_02510 PF02803 Thiolase, C-terminal domain KY499_02510 PF00108 Thiolase, N-terminal domain KY499_02520 PF00005 ABC transporter KY499_02530 PF12848 ABC transporter KY499_02530 PF00005 ABC transporter KY499_02530 PF16326 ABC transporter C-terminal domain KY499_02540 PF02104 SURF1 family KY499_02560 PF00011 Hsp20/alpha crystallin family KY499_02575 PF00005 ABC transporter KY499_02585 PF00588 SpoU rRNA Methylase family KY499_02590 PF01197 Ribosomal protein L31 KY499_02595 PF03099 Biotin/lipoate A/B protein ligase family KY499_02595 PF10437 Bacterial lipoate protein ligase C-terminus KY499_02605 PF03601 Conserved hypothetical protein 698 KY499_02610 PF04174 A circularly permuted ATPgrasp KY499_02620 PF08379 Bacterial transglutaminase-like N-terminal region KY499_02620 PF01841 Transglutaminase-like superfamily KY499_02635 PF00196 Bacterial regulatory proteins, luxR family KY499_02635 PF00072 Response regulator receiver domain KY499_02650 PF00106 short chain dehydrogenase KY499_02655 PF00483 Nucleotidyl transferase KY499_02675 PF00108 Thiolase, N-terminal domain KY499_02675 PF02803 Thiolase, C-terminal domain KY499_02685 PF01575 MaoC like domain KY499_02700 PF13409 Glutathione S-transferase, N-terminal domain KY499_02740 PF02446 4-alpha-glucanotransferase KY499_02755 PF04185 Phosphoesterase family KY499_02785 PF07687 Peptidase dimerisation domain KY499_02785 PF01546 Peptidase family M20/M25/M40 KY499_02810 PF02673 Bacitracin resistance protein BacA KY499_02815 PF01406 tRNA synthetases class I (C) catalytic domain KY499_02825 PF13419 Haloacid dehalogenase-like hydrolase KY499_02830 PF00571 CBS domain KY499_02830 PF02163 Peptidase family M50 KY499_02835 PF08704 tRNA methyltransferase complex GCD14 subunit KY499_02840 PF17758 Proteasomal ATPase OB N-terminal domain KY499_02840 PF16450 Proteasomal ATPase OB C-terminal domain KY499_02840 PF00004 ATPase family associated with various cellular activities (AAA) KY499_02845 PF03136 Pup-ligase protein KY499_02850 PF05639 Pup-like protein KY499_02855 PF00227 Proteasome subunit KY499_02860 PF00227 Proteasome subunit KY499_02865 PF03136 Pup-ligase protein KY499_02870 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KY499_02870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KY499_02875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KY499_02880 PF13280 WYL domain KY499_02890 PF02416 mttA/Hcf106 family KY499_02895 PF00902 Sec-independent protein translocase protein (TatC) KY499_02900 PF00270 DEAD/DEAH box helicase KY499_02900 PF08148 DSHCT (NUC185) domain KY499_02900 PF00271 Helicase conserved C-terminal domain KY499_02905 PF01979 Amidohydrolase family KY499_02910 PF00561 alpha/beta hydrolase fold KY499_02920 PF00535 Glycosyl transferase family 2 KY499_02925 PF13397 RNA polymerase-binding protein KY499_02970 PF01327 Polypeptide deformylase KY499_02975 PF01494 FAD binding domain KY499_02985 PF00195 Chalcone and stilbene synthases, N-terminal domain KY499_02985 PF02797 Chalcone and stilbene synthases, C-terminal domain KY499_03010 PF00589 Phage integrase family KY499_03010 PF13495 Phage integrase, N-terminal SAM-like domain KY499_03030 PF02517 CPBP intramembrane metalloprotease KY499_03065 PF01048 Phosphorylase superfamily KY499_03070 PF01370 NAD dependent epimerase/dehydratase family KY499_03080 PF01042 Endoribonuclease L-PSP KY499_03100 PF00171 Aldehyde dehydrogenase family KY499_03105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY499_03105 PF03466 LysR substrate binding domain KY499_03110 PF02028 BCCT, betaine/carnitine/choline family transporter KY499_03115 PF00689 Cation transporting ATPase, C-terminus KY499_03115 PF00690 Cation transporter/ATPase, N-terminus KY499_03125 PF00795 Carbon-nitrogen hydrolase KY499_03130 PF00324 Amino acid permease KY499_03135 PF00795 Carbon-nitrogen hydrolase KY499_03140 PF01925 Sulfite exporter TauE/SafE KY499_03145 PF00581 Rhodanese-like domain KY499_03145 PF11127 Protein of unknown function (DUF2892) KY499_03150 PF00753 Metallo-beta-lactamase superfamily KY499_03150 PF00581 Rhodanese-like domain KY499_03155 PF07690 Major Facilitator Superfamily KY499_03155 PF00083 Sugar (and other) transporter KY499_03170 PF08482 ATP-dependent helicase C-terminal KY499_03170 PF00271 Helicase conserved C-terminal domain KY499_03170 PF04408 Helicase associated domain (HA2) KY499_03170 PF00270 DEAD/DEAH box helicase KY499_03185 PF00005 ABC transporter KY499_03200 PF13416 Bacterial extracellular solute-binding protein KY499_03210 PF00027 Cyclic nucleotide-binding domain KY499_03210 PF13545 Crp-like helix-turn-helix domain KY499_03225 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_03225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KY499_03230 PF01066 CDP-alcohol phosphatidyltransferase KY499_03235 PF09335 SNARE associated Golgi protein KY499_03240 PF00723 Glycosyl hydrolases family 15 KY499_03250 PF04226 Transglycosylase associated protein KY499_03270 PF02028 BCCT, betaine/carnitine/choline family transporter KY499_03340 PF00561 alpha/beta hydrolase fold KY499_03355 PF01179 Copper amine oxidase, enzyme domain KY499_03355 PF02728 Copper amine oxidase, N3 domain KY499_03360 PF13977 BetI-type transcriptional repressor, C-terminal KY499_03360 PF00440 Bacterial regulatory proteins, tetR family KY499_03365 PF02311 AraC-like ligand binding domain KY499_03365 PF12833 Helix-turn-helix domain KY499_03370 PF01548 Transposase KY499_03370 PF02371 Transposase IS116/IS110/IS902 family KY499_03380 PF00171 Aldehyde dehydrogenase family KY499_03420 PF00144 Beta-lactamase KY499_03450 PF13520 Amino acid permease KY499_03455 PF01872 RibD C-terminal domain KY499_03480 PF05532 CsbD-like KY499_03490 PF07976 Phenol hydroxylase, C-terminal dimerisation domain KY499_03490 PF01494 FAD binding domain KY499_03495 PF01557 Fumarylacetoacetate (FAA) hydrolase family KY499_03500 PF07729 FCD domain KY499_03500 PF00392 Bacterial regulatory proteins, gntR family KY499_03505 PF00171 Aldehyde dehydrogenase family KY499_03510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KY499_03515 PF01557 Fumarylacetoacetate (FAA) hydrolase family KY499_03520 PF03328 HpcH/HpaI aldolase/citrate lyase family KY499_03525 PF00892 EamA-like transporter family KY499_03555 PF05922 Peptidase inhibitor I9 KY499_03555 PF00082 Subtilase family KY499_03570 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KY499_03570 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KY499_03575 PF01799 [2Fe-2S] binding domain KY499_03575 PF00111 2Fe-2S iron-sulfur cluster binding domain KY499_03580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KY499_03595 PF07731 Multicopper oxidase KY499_03595 PF07732 Multicopper oxidase KY499_03615 PF00717 Peptidase S24-like KY499_03640 PF00667 FAD binding domain KY499_03640 PF00067 Cytochrome P450 KY499_03640 PF00175 Oxidoreductase NAD-binding domain KY499_03640 PF00258 Flavodoxin KY499_03650 PF03551 Transcriptional regulator PadR-like family KY499_03655 PF03109 ABC1 family KY499_03660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KY499_03660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KY499_03670 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KY499_03685 PF12704 MacB-like periplasmic core domain KY499_03685 PF02687 FtsX-like permease family KY499_03685 PF00005 ABC transporter KY499_03700 PF00403 Heavy-metal-associated domain KY499_03710 PF00239 Resolvase, N terminal domain KY499_03710 PF02796 Helix-turn-helix domain of resolvase KY499_03715 PF08031 Berberine and berberine like KY499_03715 PF01565 FAD binding domain KY499_03720 PF02796 Helix-turn-helix domain of resolvase KY499_03720 PF00239 Resolvase, N terminal domain KY499_03725 PF09299 Mu transposase, C-terminal KY499_03725 PF00665 Integrase core domain KY499_03730 PF13401 AAA domain KY499_03740 PF03741 Integral membrane protein TerC family KY499_03750 PF02254 TrkA-N domain KY499_03750 PF02080 TrkA-C domain KY499_03755 PF02386 Cation transport protein KY499_03765 PF00239 Resolvase, N terminal domain KY499_03765 PF02796 Helix-turn-helix domain of resolvase KY499_03815 PF01548 Transposase KY499_03815 PF02371 Transposase IS116/IS110/IS902 family KY499_03900 PF00313 'Cold-shock' DNA-binding domain KY499_03920 PF07724 AAA domain (Cdc48 subfamily) KY499_03920 PF00004 ATPase family associated with various cellular activities (AAA) KY499_03920 PF02861 Clp amino terminal domain, pathogenicity island component KY499_03920 PF17871 AAA lid domain KY499_03920 PF10431 C-terminal, D2-small domain, of ClpB protein KY499_03935 PF04107 Glutamate-cysteine ligase family 2(GCS2) KY499_03940 PF00011 Hsp20/alpha crystallin family KY499_03990 PF02796 Helix-turn-helix domain of resolvase KY499_03990 PF00239 Resolvase, N terminal domain KY499_04020 PF02583 Metal-sensitive transcriptional repressor KY499_04025 PF00403 Heavy-metal-associated domain KY499_04030 PF01476 LysM domain KY499_04030 PF00877 NlpC/P60 family KY499_04030 PF08239 Bacterial SH3 domain KY499_04050 PF02683 Cytochrome C biogenesis protein transmembrane region KY499_04055 PF07732 Multicopper oxidase KY499_04055 PF07731 Multicopper oxidase KY499_04055 PF00394 Multicopper oxidase KY499_04080 PF01551 Peptidase family M23 KY499_04080 PF10145 Phage-related minor tail protein KY499_04080 PF01464 Transglycosylase SLT domain KY499_04085 PF01022 Bacterial regulatory protein, arsR family KY499_04095 PF00444 Ribosomal protein L36 KY499_04100 PF02492 CobW/HypB/UreG, nucleotide-binding domain KY499_04100 PF07683 Cobalamin synthesis protein cobW C-terminal domain KY499_04115 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KY499_04115 PF01297 Zinc-uptake complex component A periplasmic KY499_04120 PF00005 ABC transporter KY499_04125 PF00950 ABC 3 transport family KY499_04160 PF07732 Multicopper oxidase KY499_04160 PF07731 Multicopper oxidase KY499_04185 PF13520 Amino acid permease KY499_04190 PF00403 Heavy-metal-associated domain KY499_04200 PF00239 Resolvase, N terminal domain KY499_04200 PF02796 Helix-turn-helix domain of resolvase KY499_04210 PF03861 ANTAR domain KY499_04210 PF00072 Response regulator receiver domain KY499_04215 PF00224 Pyruvate kinase, barrel domain KY499_04215 PF02887 Pyruvate kinase, alpha/beta domain KY499_04220 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KY499_04220 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_04225 PF04898 Glutamate synthase central domain KY499_04225 PF01645 Conserved region in glutamate synthase KY499_04225 PF00310 Glutamine amidotransferases class-II KY499_04225 PF01493 GXGXG motif KY499_04230 PF01790 Prolipoprotein diacylglyceryl transferase KY499_04235 PF00290 Tryptophan synthase alpha chain KY499_04240 PF00291 Pyridoxal-phosphate dependent enzyme KY499_04245 PF00218 Indole-3-glycerol phosphate synthase KY499_04260 PF04715 Anthranilate synthase component I, N terminal region KY499_04260 PF00425 chorismate binding enzyme KY499_04265 PF01502 Phosphoribosyl-AMP cyclohydrolase KY499_04275 PF00977 Histidine biosynthesis protein KY499_04280 PF08029 HisG, C-terminal domain KY499_04280 PF01634 ATP phosphoribosyltransferase KY499_04285 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KY499_04290 PF00885 6,7-dimethyl-8-ribityllumazine synthase KY499_04295 PF00925 GTP cyclohydrolase II KY499_04295 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KY499_04300 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KY499_04300 PF00925 GTP cyclohydrolase II KY499_04305 PF00677 Lumazine binding domain KY499_04310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KY499_04310 PF01872 RibD C-terminal domain KY499_04315 PF00834 Ribulose-phosphate 3 epimerase family KY499_04320 PF01189 16S rRNA methyltransferase RsmB/F KY499_04320 PF01029 NusB family KY499_04325 PF00551 Formyl transferase KY499_04325 PF02911 Formyl transferase, C-terminal domain KY499_04330 PF01327 Polypeptide deformylase KY499_04380 PF00581 Rhodanese-like domain KY499_04385 PF02657 Fe-S metabolism associated domain KY499_04390 PF04073 Aminoacyl-tRNA editing domain KY499_04420 PF01212 Beta-eliminating lyase KY499_04435 PF02803 Thiolase, C-terminal domain KY499_04435 PF00108 Thiolase, N-terminal domain KY499_04440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KY499_04440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KY499_04440 PF00378 Enoyl-CoA hydratase/isomerase KY499_04445 PF00582 Universal stress protein family KY499_04450 PF00571 CBS domain KY499_04460 PF07556 Protein of unknown function (DUF1538) KY499_04470 PF00005 ABC transporter KY499_04470 PF13732 Domain of unknown function (DUF4162) KY499_04480 PF01209 ubiE/COQ5 methyltransferase family KY499_04505 PF00005 ABC transporter KY499_04530 PF00248 Aldo/keto reductase family KY499_04545 PF02779 Transketolase, pyrimidine binding domain KY499_04545 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KY499_04545 PF02780 Transketolase, C-terminal domain KY499_04555 PF01938 TRAM domain KY499_04555 PF05958 tRNA (Uracil-5-)-methyltransferase KY499_04560 PF13520 Amino acid permease KY499_04570 PF02254 TrkA-N domain KY499_04570 PF02080 TrkA-C domain KY499_04590 PF00692 dUTPase KY499_04625 PF03989 DNA gyrase C-terminal domain, beta-propeller KY499_04625 PF00521 DNA gyrase/topoisomerase IV, subunit A KY499_04650 PF00583 Acetyltransferase (GNAT) family KY499_04655 PF00664 ABC transporter transmembrane region KY499_04655 PF00005 ABC transporter KY499_04660 PF02322 Cytochrome bd terminal oxidase subunit II KY499_04665 PF01654 Cytochrome bd terminal oxidase subunit I KY499_04670 PF03965 Penicillinase repressor KY499_04680 PF01751 Toprim domain KY499_04680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_04680 PF00204 DNA gyrase B KY499_04680 PF00986 DNA gyrase B subunit, carboxyl terminus KY499_04690 PF00140 Sigma-70 factor, region 1.2 KY499_04690 PF04542 Sigma-70 region 2 KY499_04690 PF04539 Sigma-70 region 3 KY499_04690 PF04545 Sigma-70, region 4 KY499_04710 PF00883 Cytosol aminopeptidase family, catalytic domain KY499_04710 PF02789 Cytosol aminopeptidase family, N-terminal domain KY499_04715 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_04715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KY499_04720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KY499_04720 PF00364 Biotin-requiring enzyme KY499_04720 PF02817 e3 binding domain KY499_04730 PF02566 OsmC-like protein KY499_04740 PF01370 NAD dependent epimerase/dehydratase family KY499_04740 PF08338 Domain of unknown function (DUF1731) KY499_04750 PF03099 Biotin/lipoate A/B protein ligase family KY499_04755 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KY499_04755 PF04055 Radical SAM superfamily KY499_04775 PF00120 Glutamine synthetase, catalytic domain KY499_04775 PF03951 Glutamine synthetase, beta-Grasp domain KY499_04790 PF00356 Bacterial regulatory proteins, lacI family KY499_04795 PF00005 ABC transporter KY499_04800 PF02653 Branched-chain amino acid transport system / permease component KY499_04810 PF00294 pfkB family carbohydrate kinase KY499_04815 PF05025 RbsD / FucU transport protein family KY499_04830 PF00005 ABC transporter KY499_04835 PF00528 Binding-protein-dependent transport system inner membrane component KY499_04840 PF08335 GlnD PII-uridylyltransferase KY499_04840 PF03710 Glutamate-ammonia ligase adenylyltransferase KY499_04845 PF03951 Glutamine synthetase, beta-Grasp domain KY499_04845 PF00120 Glutamine synthetase, catalytic domain KY499_04850 PF02548 Ketopantoate hydroxymethyltransferase KY499_04860 PF00557 Metallopeptidase family M24 KY499_04865 PF00480 ROK family KY499_04870 PF03477 ATP cone domain KY499_04875 PF00815 Histidinol dehydrogenase KY499_04895 PF00849 RNA pseudouridylate synthase KY499_04900 PF01252 Signal peptidase (SPase) II KY499_04915 PF04472 Cell division protein SepF KY499_04920 PF01168 Alanine racemase, N-terminal domain KY499_04925 PF02578 Multi-copper polyphenol oxidoreductase laccase KY499_04930 PF00091 Tubulin/FtsZ family, GTPase domain KY499_04930 PF12327 FtsZ family, C-terminal domain KY499_04935 PF08478 POTRA domain, FtsQ-type KY499_04940 PF01225 Mur ligase family, catalytic domain KY499_04940 PF02875 Mur ligase family, glutamate ligase domain KY499_04940 PF08245 Mur ligase middle domain KY499_04945 PF04101 Glycosyltransferase family 28 C-terminal domain KY499_04945 PF03033 Glycosyltransferase family 28 N-terminal domain KY499_04950 PF01098 Cell cycle protein KY499_04955 PF08245 Mur ligase middle domain KY499_04955 PF02875 Mur ligase family, glutamate ligase domain KY499_04960 PF00953 Glycosyl transferase family 4 KY499_04965 PF01225 Mur ligase family, catalytic domain KY499_04965 PF02875 Mur ligase family, glutamate ligase domain KY499_04965 PF08245 Mur ligase middle domain KY499_04970 PF01225 Mur ligase family, catalytic domain KY499_04970 PF02875 Mur ligase family, glutamate ligase domain KY499_04970 PF08245 Mur ligase middle domain KY499_04975 PF03717 Penicillin-binding Protein dimerisation domain KY499_04975 PF00905 Penicillin binding protein transpeptidase domain KY499_04985 PF01795 MraW methylase family KY499_04990 PF02381 MraZ protein, putative antitoxin-like KY499_05000 PF00817 impB/mucB/samB family KY499_05000 PF11799 impB/mucB/samB family C-terminal domain KY499_05000 PF11798 IMS family HHH motif KY499_05010 PF00348 Polyprenyl synthetase KY499_05025 PF03793 PASTA domain KY499_05025 PF00069 Protein kinase domain KY499_05030 PF01474 Class-II DAHP synthetase family KY499_05040 PF12146 Serine aminopeptidase, S33 KY499_05050 PF00480 ROK family KY499_05060 PF02785 Biotin carboxylase C-terminal domain KY499_05060 PF00289 Biotin carboxylase, N-terminal domain KY499_05060 PF00364 Biotin-requiring enzyme KY499_05060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KY499_05060 PF00682 HMGL-like KY499_05060 PF02436 Conserved carboxylase domain KY499_05070 PF13411 MerR HTH family regulatory protein KY499_05075 PF02577 Bifunctional nuclease KY499_05080 PF00376 MerR family regulatory protein KY499_05085 PF00498 FHA domain KY499_05090 PF01597 Glycine cleavage H-protein KY499_05115 PF02153 Prephenate dehydrogenase KY499_05125 PF04079 Segregation and condensation complex subunit ScpB KY499_05130 PF02616 Segregation and condensation protein ScpA KY499_05135 PF13614 AAA domain KY499_05140 PF00375 Sodium:dicarboxylate symporter family KY499_05150 PF00072 Response regulator receiver domain KY499_05150 PF04703 FaeA-like protein KY499_05155 PF13193 AMP-binding enzyme C-terminal domain KY499_05155 PF16177 Acetyl-coenzyme A synthetase N-terminus KY499_05155 PF00501 AMP-binding enzyme KY499_05160 PF07729 FCD domain KY499_05160 PF00392 Bacterial regulatory proteins, gntR family KY499_05165 PF03972 MmgE/PrpD family KY499_05180 PF00285 Citrate synthase, C-terminal domain KY499_05200 PF00465 Iron-containing alcohol dehydrogenase KY499_05215 PF02627 Carboxymuconolactone decarboxylase family KY499_05220 PF01738 Dienelactone hydrolase family KY499_05230 PF02899 Phage integrase, N-terminal SAM-like domain KY499_05230 PF00589 Phage integrase family KY499_05235 PF00293 NUDIX domain KY499_05240 PF06418 CTP synthase N-terminus KY499_05240 PF00117 Glutamine amidotransferase class-I KY499_05250 PF01513 ATP-NAD kinase KY499_05255 PF01728 FtsJ-like methyltransferase KY499_05255 PF01479 S4 domain KY499_05265 PF13344 Haloacid dehalogenase-like hydrolase KY499_05265 PF18407 GCN5-related N-acetyltransferase like domain KY499_05345 PF00579 tRNA synthetases class I (W and Y) KY499_05355 PF00156 Phosphoribosyl transferase domain KY499_05360 PF02245 Methylpurine-DNA glycosylase (MPG) KY499_05365 PF02805 Metal binding domain of Ada KY499_05365 PF06029 AlkA N-terminal domain KY499_05365 PF00730 HhH-GPD superfamily base excision DNA repair protein KY499_05365 PF12833 Helix-turn-helix domain KY499_05370 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KY499_05370 PF12833 Helix-turn-helix domain KY499_05370 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KY499_05370 PF02805 Metal binding domain of Ada KY499_05380 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KY499_05380 PF01243 Pyridoxamine 5'-phosphate oxidase KY499_05385 PF14698 Argininosuccinate lyase C-terminal KY499_05385 PF00206 Lyase KY499_05390 PF00764 Arginosuccinate synthase KY499_05395 PF02863 Arginine repressor, C-terminal domain KY499_05395 PF01316 Arginine repressor, DNA binding domain KY499_05400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KY499_05400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KY499_05405 PF00202 Aminotransferase class-III KY499_05410 PF00696 Amino acid kinase family KY499_05415 PF01960 ArgJ family KY499_05420 PF02774 Semialdehyde dehydrogenase, dimerisation domain KY499_05420 PF01118 Semialdehyde dehydrogenase, NAD binding domain KY499_05430 PF00107 Zinc-binding dehydrogenase KY499_05430 PF08240 Alcohol dehydrogenase GroES-like domain KY499_05440 PF03483 B3/4 domain KY499_05440 PF03484 tRNA synthetase B5 domain KY499_05440 PF03147 Ferredoxin-fold anticodon binding domain KY499_05440 PF01588 Putative tRNA binding domain KY499_05440 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KY499_05445 PF01409 tRNA synthetases class II core domain (F) KY499_05445 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KY499_05450 PF00266 Aminotransferase class-V KY499_05465 PF04055 Radical SAM superfamily KY499_05470 PF02233 NAD(P) transhydrogenase beta subunit KY499_05475 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KY499_05480 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KY499_05480 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KY499_05490 PF00293 NUDIX domain KY499_05495 PF07690 Major Facilitator Superfamily KY499_05505 PF01545 Cation efflux family KY499_05505 PF16916 Dimerisation domain of Zinc Transporter KY499_05510 PF04226 Transglycosylase associated protein KY499_05515 PF00588 SpoU rRNA Methylase family KY499_05515 PF08032 RNA 2'-O ribose methyltransferase substrate binding KY499_05520 PF00453 Ribosomal protein L20 KY499_05525 PF01632 Ribosomal protein L35 KY499_05530 PF00707 Translation initiation factor IF-3, C-terminal domain KY499_05530 PF05198 Translation initiation factor IF-3, N-terminal domain KY499_05550 PF00977 Histidine biosynthesis protein KY499_05560 PF00117 Glutamine amidotransferase class-I KY499_05565 PF00475 Imidazoleglycerol-phosphate dehydratase KY499_05570 PF00155 Aminotransferase class I and II KY499_05580 PF01726 LexA DNA binding domain KY499_05580 PF00717 Peptidase S24-like KY499_05590 PF16360 GTP-binding GTPase Middle Region KY499_05590 PF13167 GTP-binding GTPase N-terminal KY499_05590 PF01926 50S ribosome-binding GTPase KY499_05600 PF01678 Diaminopimelate epimerase KY499_05610 PF04055 Radical SAM superfamily KY499_05610 PF00919 Uncharacterized protein family UPF0004 KY499_05615 PF02631 RecX family KY499_05620 PF00154 recA bacterial DNA recombination protein KY499_05640 PF02464 Competence-damaged protein KY499_05640 PF18146 Damage-inducible protein CinA KH domain KY499_05640 PF00994 Probable molybdopterin binding domain KY499_05645 PF01066 CDP-alcohol phosphatidyltransferase KY499_05655 PF12706 Beta-lactamase superfamily domain KY499_05655 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KY499_05655 PF17770 Ribonuclease J C-terminal domain KY499_05660 PF00701 Dihydrodipicolinate synthetase family KY499_05690 PF05173 Dihydrodipicolinate reductase, C-terminus KY499_05690 PF01113 Dihydrodipicolinate reductase, N-terminus KY499_05695 PF02391 MoaE protein KY499_05700 PF00994 Probable molybdopterin binding domain KY499_05705 PF01967 MoaC family KY499_05710 PF00994 Probable molybdopterin binding domain KY499_05710 PF03453 MoeA N-terminal region (domain I and II) KY499_05710 PF03454 MoeA C-terminal region (domain IV) KY499_05720 PF00512 His Kinase A (phospho-acceptor) domain KY499_05720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_05720 PF00672 HAMP domain KY499_05725 PF00486 Transcriptional regulatory protein, C terminal KY499_05725 PF00072 Response regulator receiver domain KY499_05730 PF04055 Radical SAM superfamily KY499_05730 PF06463 Molybdenum Cofactor Synthesis C KY499_05745 PF07690 Major Facilitator Superfamily KY499_05750 PF05193 Peptidase M16 inactive domain KY499_05750 PF00675 Insulinase (Peptidase family M16) KY499_05755 PF01138 3' exoribonuclease family, domain 1 KY499_05755 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KY499_05755 PF00013 KH domain KY499_05755 PF00575 S1 RNA binding domain KY499_05760 PF00312 Ribosomal protein S15 KY499_05765 PF00266 Aminotransferase class-V KY499_05770 PF03301 Tryptophan 2,3-dioxygenase KY499_05775 PF01687 Riboflavin kinase KY499_05775 PF06574 FAD synthetase KY499_05815 PF00155 Aminotransferase class I and II KY499_05825 PF02033 Ribosome-binding factor A KY499_05830 PF11987 Translation-initiation factor 2 KY499_05830 PF00009 Elongation factor Tu GTP binding domain KY499_05830 PF04760 Translation initiation factor IF-2, N-terminal region KY499_05840 PF13184 NusA-like KH domain KY499_05840 PF08529 NusA N-terminal domain KY499_05845 PF02576 RimP N-terminal domain KY499_05845 PF17384 RimP C-terminal SH3 domain KY499_05860 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase KY499_05870 PF01925 Sulfite exporter TauE/SafE KY499_05885 PF04551 GcpE protein KY499_05905 PF17820 PDZ domain KY499_05905 PF02163 Peptidase family M50 KY499_05910 PF13288 DXP reductoisomerase C-terminal domain KY499_05910 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KY499_05910 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KY499_05925 PF01970 Tripartite tricarboxylate transporter TctA family KY499_05945 PF08279 HTH domain KY499_05945 PF00072 Response regulator receiver domain KY499_05950 PF03328 HpcH/HpaI aldolase/citrate lyase family KY499_05960 PF01144 Coenzyme A transferase KY499_05965 PF01144 Coenzyme A transferase KY499_05970 PF02770 Acyl-CoA dehydrogenase, middle domain KY499_05970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KY499_05970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KY499_05980 PF01039 Carboxyl transferase domain KY499_06000 PF02779 Transketolase, pyrimidine binding domain KY499_06000 PF02780 Transketolase, C-terminal domain KY499_06005 PF00676 Dehydrogenase E1 component KY499_06010 PF01037 Lrp/AsnC ligand binding domain KY499_06015 PF00474 Sodium:solute symporter family KY499_06025 PF07694 5TMR of 5TMR-LYT KY499_06025 PF06580 Histidine kinase KY499_06030 PF00072 Response regulator receiver domain KY499_06030 PF04397 LytTr DNA-binding domain KY499_06040 PF00474 Sodium:solute symporter family KY499_06055 PF01765 Ribosome recycling factor KY499_06060 PF00696 Amino acid kinase family KY499_06065 PF00889 Elongation factor TS KY499_06070 PF00318 Ribosomal protein S2 KY499_06075 PF01551 Peptidase family M23 KY499_06080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KY499_06080 PF02770 Acyl-CoA dehydrogenase, middle domain KY499_06080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KY499_06090 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KY499_06100 PF00534 Glycosyl transferases group 1 KY499_06100 PF08323 Starch synthase catalytic domain KY499_06110 PF01066 CDP-alcohol phosphatidyltransferase KY499_06120 PF07690 Major Facilitator Superfamily KY499_06140 PF13662 Toprim domain KY499_06140 PF08275 DNA primase catalytic core, N-terminal domain KY499_06140 PF10410 DnaB-helicase binding domain of primase KY499_06140 PF01807 CHC2 zinc finger KY499_06140 PF08278 DNA primase DnaG DnaB-binding KY499_06145 PF13286 Phosphohydrolase-associated domain KY499_06145 PF01966 HD domain KY499_06150 PF01207 Dihydrouridine synthase (Dus) KY499_06160 PF08031 Berberine and berberine like KY499_06160 PF01565 FAD binding domain KY499_06185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KY499_06185 PF03129 Anticodon binding domain KY499_06215 PF00171 Aldehyde dehydrogenase family KY499_06220 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KY499_06220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KY499_06235 PF00561 alpha/beta hydrolase fold KY499_06240 PF01053 Cys/Met metabolism PLP-dependent enzyme KY499_06260 PF01979 Amidohydrolase family KY499_06270 PF00155 Aminotransferase class I and II KY499_06275 PF00107 Zinc-binding dehydrogenase KY499_06275 PF08240 Alcohol dehydrogenase GroES-like domain KY499_06295 PF02686 Glu-tRNAGln amidotransferase C subunit KY499_06300 PF01042 Endoribonuclease L-PSP KY499_06315 PF00459 Inositol monophosphatase family KY499_06320 PF03120 NAD-dependent DNA ligase OB-fold domain KY499_06320 PF01653 NAD-dependent DNA ligase adenylation domain KY499_06320 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KY499_06320 PF12826 Helix-hairpin-helix motif KY499_06320 PF00533 BRCA1 C Terminus (BRCT) domain KY499_06330 PF00211 Adenylate and Guanylate cyclase catalytic domain KY499_06330 PF16701 Adenylate cyclase regulatory domain KY499_06340 PF02237 Biotin protein ligase C terminal domain KY499_06340 PF03099 Biotin/lipoate A/B protein ligase family KY499_06340 PF08279 HTH domain KY499_06350 PF01039 Carboxyl transferase domain KY499_06365 PF00375 Sodium:dicarboxylate symporter family KY499_06375 PF01906 Putative heavy-metal-binding KY499_06380 PF17754 MftR C-terminal domain KY499_06380 PF00440 Bacterial regulatory proteins, tetR family KY499_06385 PF03176 MMPL family KY499_06400 PF02545 Maf-like protein KY499_06405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KY499_06405 PF02785 Biotin carboxylase C-terminal domain KY499_06405 PF00289 Biotin carboxylase, N-terminal domain KY499_06405 PF00364 Biotin-requiring enzyme KY499_06415 PF07690 Major Facilitator Superfamily KY499_06415 PF00083 Sugar (and other) transporter KY499_06420 PF07690 Major Facilitator Superfamily KY499_06425 PF00384 Molybdopterin oxidoreductase KY499_06425 PF01568 Molydopterin dinucleotide binding domain KY499_06425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KY499_06430 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_06430 PF14759 Reductase C-terminal KY499_06455 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_06455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KY499_06460 PF12724 Flavodoxin domain KY499_06465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KY499_06465 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_06470 PF01048 Phosphorylase superfamily KY499_06475 PF02082 Transcriptional regulator KY499_06480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KY499_06480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KY499_06480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KY499_06480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KY499_06495 PF02602 Uroporphyrinogen-III synthase HemD KY499_06495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KY499_06510 PF01791 DeoC/LacD family aldolase KY499_06530 PF11066 Protein of unknown function (DUF2867) KY499_06530 PF13460 NAD(P)H-binding KY499_06550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KY499_06550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KY499_06550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KY499_06555 PF01592 NifU-like N terminal domain KY499_06560 PF00266 Aminotransferase class-V KY499_06575 PF13614 AAA domain KY499_06580 PF13439 Glycosyltransferase Family 4 KY499_06580 PF00534 Glycosyl transferases group 1 KY499_06610 PF05547 Immune inhibitor A peptidase M6 KY499_06610 PF00801 PKD domain KY499_06640 PF00196 Bacterial regulatory proteins, luxR family KY499_06640 PF00072 Response regulator receiver domain KY499_06655 PF00196 Bacterial regulatory proteins, luxR family KY499_06670 PF01195 Peptidyl-tRNA hydrolase KY499_06675 PF14693 Ribosomal protein TL5, C-terminal domain KY499_06675 PF01386 Ribosomal L25p family KY499_06680 PF14572 Phosphoribosyl synthetase-associated domain KY499_06680 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KY499_06685 PF00132 Bacterial transferase hexapeptide (six repeats) KY499_06685 PF12804 MobA-like NTP transferase domain KY499_06695 PF00005 ABC transporter KY499_06695 PF16326 ABC transporter C-terminal domain KY499_06695 PF12848 ABC transporter KY499_06700 PF08544 GHMP kinases C terminal KY499_06700 PF00288 GHMP kinases N terminal domain KY499_06705 PF00398 Ribosomal RNA adenine dimethylase KY499_06710 PF03990 G5-linked-Ubiquitin-like domain KY499_06710 PF06737 Transglycosylase-like domain KY499_06710 PF07501 G5 domain KY499_06715 PF01026 TatD related DNase KY499_06720 PF17863 AAA lid domain KY499_06720 PF07726 ATPase family associated with various cellular activities (AAA) KY499_06730 PF01841 Transglutaminase-like superfamily KY499_06730 PF13559 Domain of unknown function (DUF4129) KY499_06730 PF11992 Domain of unknown function (DUF3488) KY499_06735 PF00171 Aldehyde dehydrogenase family KY499_06745 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase KY499_06745 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KY499_06750 PF00501 AMP-binding enzyme KY499_06760 PF17964 Bacterial Ig domain KY499_06760 PF03734 L,D-transpeptidase catalytic domain KY499_06765 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KY499_06765 PF05221 S-adenosyl-L-homocysteine hydrolase KY499_06790 PF00535 Glycosyl transferase family 2 KY499_06790 PF00534 Glycosyl transferases group 1 KY499_06795 PF02467 Transcription factor WhiB KY499_06810 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KY499_06810 PF02222 ATP-grasp domain KY499_06815 PF00731 AIR carboxylase KY499_06820 PF03816 Cell envelope-related transcriptional attenuator domain KY499_06825 PF01238 Phosphomannose isomerase type I KY499_06835 PF01370 NAD dependent epimerase/dehydratase family KY499_06840 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KY499_06850 PF00484 Carbonic anhydrase KY499_06855 PF00206 Lyase KY499_06855 PF10415 Fumarase C C-terminus KY499_06870 PF06750 Bacterial Peptidase A24 N-terminal domain KY499_06870 PF01478 Type IV leader peptidase family KY499_06885 PF02562 PhoH-like protein KY499_06885 PF13638 PIN domain KY499_06895 PF03006 Haemolysin-III related KY499_06900 PF03932 CutC family KY499_06910 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KY499_06915 PF00528 Binding-protein-dependent transport system inner membrane component KY499_06920 PF00528 Binding-protein-dependent transport system inner membrane component KY499_06935 PF00480 ROK family KY499_06940 PF00294 pfkB family carbohydrate kinase KY499_06945 PF01116 Fructose-bisphosphate aldolase class-II KY499_06950 PF00455 DeoR C terminal sensor domain KY499_06950 PF08220 DeoR-like helix-turn-helix domain KY499_06955 PF03190 Protein of unknown function, DUF255 KY499_06965 PF02585 GlcNAc-PI de-N-acetylase KY499_06975 PF01272 Transcription elongation factor, GreA/GreB, C-term KY499_06975 PF03449 Transcription elongation factor, N-terminal KY499_06980 PF01694 Rhomboid family KY499_06990 PF01594 AI-2E family transporter KY499_06995 PF01263 Aldose 1-epimerase KY499_07000 PF00288 GHMP kinases N terminal domain KY499_07000 PF10509 Galactokinase galactose-binding signature KY499_07000 PF08544 GHMP kinases C terminal KY499_07005 PF02803 Thiolase, C-terminal domain KY499_07005 PF00108 Thiolase, N-terminal domain KY499_07020 PF02653 Branched-chain amino acid transport system / permease component KY499_07025 PF02653 Branched-chain amino acid transport system / permease component KY499_07025 PF11862 Domain of unknown function (DUF3382) KY499_07030 PF12399 Branched-chain amino acid ATP-binding cassette transporter KY499_07030 PF00005 ABC transporter KY499_07055 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_07065 PF02541 Ppx/GppA phosphatase family KY499_07080 PF00113 Enolase, C-terminal TIM barrel domain KY499_07080 PF03952 Enolase, N-terminal domain KY499_07085 PF03819 MazG nucleotide pyrophosphohydrolase domain KY499_07090 PF00962 Adenosine/AMP deaminase KY499_07095 PF09335 SNARE associated Golgi protein KY499_07110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KY499_07120 PF02653 Branched-chain amino acid transport system / permease component KY499_07125 PF00005 ABC transporter KY499_07130 PF02608 ABC transporter substrate-binding protein PnrA-like KY499_07135 PF00107 Zinc-binding dehydrogenase KY499_07135 PF16884 N-terminal domain of oxidoreductase KY499_07140 PF02566 OsmC-like protein KY499_07145 PF01047 MarR family KY499_07165 PF01050 Mannose-6-phosphate isomerase KY499_07165 PF00483 Nucleotidyl transferase KY499_07170 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KY499_07180 PF00890 FAD binding domain KY499_07180 PF02910 Fumarate reductase flavoprotein C-term KY499_07185 PF13085 2Fe-2S iron-sulfur cluster binding domain KY499_07205 PF00579 tRNA synthetases class I (W and Y) KY499_07225 PF00464 Serine hydroxymethyltransferase KY499_07230 PF00551 Formyl transferase KY499_07240 PF00132 Bacterial transferase hexapeptide (six repeats) KY499_07245 PF01593 Flavin containing amine oxidoreductase KY499_07245 PF02027 RolB/RolC glucosidase family KY499_07250 PF13520 Amino acid permease KY499_07260 PF00795 Carbon-nitrogen hydrolase KY499_07265 PF01047 MarR family KY499_07265 PF00480 ROK family KY499_07270 PF00005 ABC transporter KY499_07275 PF02653 Branched-chain amino acid transport system / permease component KY499_07280 PF13407 Periplasmic binding protein domain KY499_07290 PF00005 ABC transporter KY499_07295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY499_07305 PF00069 Protein kinase domain KY499_07305 PF03793 PASTA domain KY499_07325 PF02142 MGS-like domain KY499_07325 PF01808 AICARFT/IMPCHase bienzyme KY499_07330 PF07690 Major Facilitator Superfamily KY499_07340 PF00551 Formyl transferase KY499_07360 PF01381 Helix-turn-helix KY499_07360 PF07883 Cupin domain KY499_07365 PF00083 Sugar (and other) transporter KY499_07375 PF02515 CoA-transferase family III KY499_07380 PF00378 Enoyl-CoA hydratase/isomerase KY499_07390 PF00106 short chain dehydrogenase KY499_07400 PF00037 4Fe-4S binding domain KY499_07410 PF01145 SPFH domain / Band 7 family KY499_07410 PF15975 Flotillin KY499_07420 PF13439 Glycosyltransferase Family 4 KY499_07420 PF00534 Glycosyl transferases group 1 KY499_07425 PF00563 EAL domain KY499_07425 PF00990 Diguanylate cyclase, GGDEF domain KY499_07425 PF03707 Bacterial signalling protein N terminal repeat KY499_07430 PF00563 EAL domain KY499_07430 PF00990 Diguanylate cyclase, GGDEF domain KY499_07430 PF03707 Bacterial signalling protein N terminal repeat KY499_07440 PF00563 EAL domain KY499_07440 PF00990 Diguanylate cyclase, GGDEF domain KY499_07440 PF03707 Bacterial signalling protein N terminal repeat KY499_07450 PF00106 short chain dehydrogenase KY499_07480 PF00313 'Cold-shock' DNA-binding domain KY499_07505 PF01022 Bacterial regulatory protein, arsR family KY499_07510 PF16916 Dimerisation domain of Zinc Transporter KY499_07510 PF01545 Cation efflux family KY499_07520 PF00877 NlpC/P60 family KY499_07520 PF01476 LysM domain KY499_07520 PF08239 Bacterial SH3 domain KY499_07540 PF01790 Prolipoprotein diacylglyceryl transferase KY499_07555 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KY499_07565 PF00146 NADH dehydrogenase KY499_07575 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KY499_07580 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KY499_07580 PF00361 Proton-conducting membrane transporter KY499_07590 PF00361 Proton-conducting membrane transporter KY499_07625 PF00082 Subtilase family KY499_07635 PF02909 Tetracyclin repressor-like, C-terminal domain KY499_07635 PF00440 Bacterial regulatory proteins, tetR family KY499_07675 PF00107 Zinc-binding dehydrogenase KY499_07675 PF08240 Alcohol dehydrogenase GroES-like domain KY499_07695 PF04545 Sigma-70, region 4 KY499_07695 PF04542 Sigma-70 region 2 KY499_07695 PF00140 Sigma-70 factor, region 1.2 KY499_07710 PF13476 AAA domain KY499_07725 PF01695 IstB-like ATP binding protein KY499_07740 PF00266 Aminotransferase class-V KY499_07795 PF03747 ADP-ribosylglycohydrolase KY499_07800 PF04545 Sigma-70, region 4 KY499_07800 PF04539 Sigma-70 region 3 KY499_07800 PF04542 Sigma-70 region 2 KY499_07800 PF00140 Sigma-70 factor, region 1.2 KY499_07815 PF12705 PD-(D/E)XK nuclease superfamily KY499_07820 PF12705 PD-(D/E)XK nuclease superfamily KY499_07820 PF00580 UvrD/REP helicase N-terminal domain KY499_07820 PF13361 UvrD-like helicase C-terminal domain KY499_07845 PF00324 Amino acid permease KY499_07850 PF00155 Aminotransferase class I and II KY499_07860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KY499_07860 PF00205 Thiamine pyrophosphate enzyme, central domain KY499_07860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KY499_07865 PF17827 PrmC N-terminal domain KY499_07865 PF05175 Methyltransferase small domain KY499_07890 PF00144 Beta-lactamase KY499_07905 PF00300 Histidine phosphatase superfamily (branch 1) KY499_07910 PF01557 Fumarylacetoacetate (FAA) hydrolase family KY499_07915 PF01070 FMN-dependent dehydrogenase KY499_07930 PF00144 Beta-lactamase KY499_07935 PF03741 Integral membrane protein TerC family KY499_07975 PF00291 Pyridoxal-phosphate dependent enzyme KY499_07980 PF07729 FCD domain KY499_07980 PF00392 Bacterial regulatory proteins, gntR family KY499_07985 PF00072 Response regulator receiver domain KY499_07985 PF00196 Bacterial regulatory proteins, luxR family KY499_07990 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KY499_08005 PF00356 Bacterial regulatory proteins, lacI family KY499_08025 PF01546 Peptidase family M20/M25/M40 KY499_08025 PF07687 Peptidase dimerisation domain KY499_08055 PF00753 Metallo-beta-lactamase superfamily KY499_08060 PF00085 Thioredoxin KY499_08065 PF00581 Rhodanese-like domain KY499_08070 PF00581 Rhodanese-like domain KY499_08070 PF11127 Protein of unknown function (DUF2892) KY499_08075 PF02583 Metal-sensitive transcriptional repressor KY499_08080 PF00990 Diguanylate cyclase, GGDEF domain KY499_08085 PF00561 alpha/beta hydrolase fold KY499_08090 PF07690 Major Facilitator Superfamily KY499_08100 PF00708 Acylphosphatase KY499_08120 PF02903 Alpha amylase, N-terminal ig-like domain KY499_08120 PF00128 Alpha amylase, catalytic domain KY499_08125 PF00962 Adenosine/AMP deaminase KY499_08130 PF17755 UvrA DNA-binding domain KY499_08150 PF00486 Transcriptional regulatory protein, C terminal KY499_08150 PF00072 Response regulator receiver domain KY499_08155 PF00989 PAS fold KY499_08155 PF00672 HAMP domain KY499_08155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_08155 PF00512 His Kinase A (phospho-acceptor) domain KY499_08175 PF01370 NAD dependent epimerase/dehydratase family KY499_08190 PF02720 Domain of unknown function (DUF222) KY499_08200 PF09371 Tex-like protein N-terminal domain KY499_08200 PF00575 S1 RNA binding domain KY499_08200 PF17674 HHH domain KY499_08200 PF16921 Tex protein YqgF-like domain KY499_08215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KY499_08230 PF03852 DNA mismatch endonuclease Vsr KY499_08245 PF12102 Domain of unknown function (DUF3578) KY499_08245 PF07728 AAA domain (dynein-related subfamily) KY499_08265 PF00005 ABC transporter KY499_08265 PF00664 ABC transporter transmembrane region KY499_08280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KY499_08280 PF00205 Thiamine pyrophosphate enzyme, central domain KY499_08280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KY499_08285 PF00491 Arginase family KY499_08295 PF07883 Cupin domain KY499_08295 PF01381 Helix-turn-helix KY499_08300 PF00474 Sodium:solute symporter family KY499_08330 PF07722 Peptidase C26 KY499_08335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY499_08335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY499_08340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY499_08340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY499_08345 PF01261 Xylose isomerase-like TIM barrel KY499_08350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY499_08350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY499_08355 PF00005 ABC transporter KY499_08360 PF02653 Branched-chain amino acid transport system / permease component KY499_08370 PF00392 Bacterial regulatory proteins, gntR family KY499_08370 PF07702 UTRA domain KY499_08375 PF04962 KduI/IolB family KY499_08380 PF07690 Major Facilitator Superfamily KY499_08385 PF01047 MarR family KY499_08390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY499_08390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY499_08400 PF00171 Aldehyde dehydrogenase family KY499_08405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KY499_08405 PF00205 Thiamine pyrophosphate enzyme, central domain KY499_08405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KY499_08415 PF00294 pfkB family carbohydrate kinase KY499_08420 PF14552 Tautomerase enzyme KY499_08425 PF00549 CoA-ligase KY499_08425 PF02629 CoA binding domain KY499_08435 PF00580 UvrD/REP helicase N-terminal domain KY499_08435 PF13361 UvrD-like helicase C-terminal domain KY499_08440 PF00459 Inositol monophosphatase family KY499_08445 PF00005 ABC transporter KY499_08445 PF17755 UvrA DNA-binding domain KY499_08445 PF17760 UvrA interaction domain KY499_08465 PF00990 Diguanylate cyclase, GGDEF domain KY499_08465 PF03707 Bacterial signalling protein N terminal repeat KY499_08465 PF00563 EAL domain KY499_08480 PF02839 Carbohydrate binding domain KY499_08500 PF00293 NUDIX domain KY499_08505 PF00723 Glycosyl hydrolases family 15 KY499_08515 PF00664 ABC transporter transmembrane region KY499_08515 PF00005 ABC transporter KY499_08520 PF00005 ABC transporter KY499_08540 PF00497 Bacterial extracellular solute-binding proteins, family 3 KY499_08545 PF00528 Binding-protein-dependent transport system inner membrane component KY499_08550 PF00005 ABC transporter KY499_08560 PF02634 FdhD/NarQ family KY499_08590 PF08525 Opacity-associated protein A N-terminal motif KY499_08590 PF01551 Peptidase family M23 KY499_08590 PF01476 LysM domain KY499_08600 PF00266 Aminotransferase class-V KY499_08605 PF07690 Major Facilitator Superfamily KY499_08615 PF00313 'Cold-shock' DNA-binding domain KY499_08630 PF00271 Helicase conserved C-terminal domain KY499_08630 PF04851 Type III restriction enzyme, res subunit KY499_08645 PF00072 Response regulator receiver domain KY499_08645 PF00486 Transcriptional regulatory protein, C terminal KY499_08650 PF00672 HAMP domain KY499_08650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_08650 PF00512 His Kinase A (phospho-acceptor) domain KY499_08660 PF00075 RNase H KY499_08665 PF00118 TCP-1/cpn60 chaperonin family KY499_08670 PF00313 'Cold-shock' DNA-binding domain KY499_08685 PF03167 Uracil DNA glycosylase superfamily KY499_08690 PF08021 Siderophore-interacting FAD-binding domain KY499_08690 PF04954 Siderophore-interacting protein KY499_08705 PF03073 TspO/MBR family KY499_08710 PF03313 Serine dehydratase alpha chain KY499_08710 PF03315 Serine dehydratase beta chain KY499_08715 PF00464 Serine hydroxymethyltransferase KY499_08720 PF01597 Glycine cleavage H-protein KY499_08725 PF01571 Aminomethyltransferase folate-binding domain KY499_08725 PF08669 Glycine cleavage T-protein C-terminal barrel domain KY499_08730 PF02347 Glycine cleavage system P-protein KY499_08735 PF00440 Bacterial regulatory proteins, tetR family KY499_08740 PF07690 Major Facilitator Superfamily KY499_08745 PF00210 Ferritin-like domain KY499_08760 PF02599 Global regulator protein family KY499_08770 PF00771 FHIPEP family KY499_08775 PF01312 FlhB HrpN YscU SpaS Family KY499_08785 PF01313 Bacterial export proteins, family 3 KY499_08790 PF00813 FliP family KY499_08800 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KY499_08810 PF00691 OmpA family KY499_08810 PF13677 Membrane MotB of proton-channel complex MotA/MotB KY499_08815 PF01618 MotA/TolQ/ExbB proton channel family KY499_08825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KY499_08825 PF07559 Flagellar basal body protein FlaE KY499_08825 PF00460 Flagella basal body rod protein KY499_08830 PF13861 FlgD Tudor-like domain KY499_08830 PF13860 FlgD Ig-like domain KY499_08830 PF03963 Flagellar hook capping protein - N-terminal region KY499_08840 PF00877 NlpC/P60 family KY499_08850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KY499_08850 PF02874 ATP synthase alpha/beta family, beta-barrel domain KY499_08850 PF18269 T3SS EscN ATPase C-terminal domain KY499_08860 PF14842 FliG N-terminal domain KY499_08860 PF14841 FliG middle domain KY499_08860 PF01706 FliG C-terminal domain KY499_08870 PF02049 Flagellar hook-basal body complex protein FliE KY499_08880 PF00460 Flagella basal body rod protein KY499_08895 PF07195 Flagellar hook-associated protein 2 C-terminus KY499_08895 PF02465 Flagellar hook-associated protein 2 N-terminus KY499_08900 PF00700 Bacterial flagellin C-terminal helical region KY499_08900 PF00669 Bacterial flagellin N-terminal helical region KY499_08915 PF00460 Flagella basal body rod protein KY499_08915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KY499_08920 PF00700 Bacterial flagellin C-terminal helical region KY499_08920 PF07196 Flagellin hook IN motif KY499_08920 PF00669 Bacterial flagellin N-terminal helical region KY499_08925 PF02623 FliW protein KY499_08955 PF00982 Glycosyltransferase family 20 KY499_08965 PF00005 ABC transporter KY499_08965 PF17912 MalK OB fold domain KY499_08975 PF01565 FAD binding domain KY499_08975 PF02913 FAD linked oxidases, C-terminal domain KY499_08985 PF00356 Bacterial regulatory proteins, lacI family KY499_09020 PF00128 Alpha amylase, catalytic domain KY499_09020 PF16657 Maltogenic Amylase, C-terminal domain KY499_09025 PF11896 Domain of unknown function (DUF3416) KY499_09045 PF00795 Carbon-nitrogen hydrolase KY499_09050 PF00588 SpoU rRNA Methylase family KY499_09050 PF08032 RNA 2'-O ribose methyltransferase substrate binding KY499_09055 PF09190 DALR domain KY499_09055 PF01406 tRNA synthetases class I (C) catalytic domain KY499_09065 PF02542 YgbB family KY499_09070 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KY499_09075 PF02559 CarD-like/TRCF domain KY499_09085 PF00072 Response regulator receiver domain KY499_09085 PF00486 Transcriptional regulatory protein, C terminal KY499_09095 PF01895 PhoU domain KY499_09100 PF00300 Histidine phosphatase superfamily (branch 1) KY499_09115 PF01053 Cys/Met metabolism PLP-dependent enzyme KY499_09120 PF02223 Thymidylate kinase KY499_09125 PF12169 DNA polymerase III subunits gamma and tau domain III KY499_09130 PF00561 alpha/beta hydrolase fold KY499_09195 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system KY499_09200 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KY499_09235 PF01555 DNA methylase KY499_09375 PF03120 NAD-dependent DNA ligase OB-fold domain KY499_09375 PF12826 Helix-hairpin-helix motif KY499_09375 PF00533 BRCA1 C Terminus (BRCT) domain KY499_09375 PF01653 NAD-dependent DNA ligase adenylation domain KY499_09440 PF00553 Cellulose binding domain KY499_09440 PF00150 Cellulase (glycosyl hydrolase family 5) KY499_09445 PF07690 Major Facilitator Superfamily KY499_09470 PF10759 Protein of unknown function (DUF2587) KY499_09480 PF02554 Carbon starvation protein CstA KY499_09480 PF13722 5TM C-terminal transporter carbon starvation CstA KY499_09490 PF08240 Alcohol dehydrogenase GroES-like domain KY499_09490 PF00107 Zinc-binding dehydrogenase KY499_09510 PF00149 Calcineurin-like phosphoesterase KY499_09535 PF09382 RQC domain KY499_09535 PF16124 RecQ zinc-binding KY499_09535 PF00270 DEAD/DEAH box helicase KY499_09535 PF00271 Helicase conserved C-terminal domain KY499_09535 PF00570 HRDC domain KY499_09540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KY499_09540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KY499_09540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KY499_09540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KY499_09555 PF00970 Oxidoreductase FAD-binding domain KY499_09555 PF00175 Oxidoreductase NAD-binding domain KY499_09555 PF00042 Globin KY499_09560 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KY499_09560 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KY499_09570 PF00403 Heavy-metal-associated domain KY499_09570 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_09570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KY499_09585 PF00440 Bacterial regulatory proteins, tetR family KY499_09585 PF08361 MAATS-type transcriptional repressor, C-terminal region KY499_09605 PF00072 Response regulator receiver domain KY499_09605 PF00486 Transcriptional regulatory protein, C terminal KY499_09615 PF00072 Response regulator receiver domain KY499_09615 PF00486 Transcriptional regulatory protein, C terminal KY499_09620 PF00672 HAMP domain KY499_09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_09620 PF00512 His Kinase A (phospho-acceptor) domain KY499_09645 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase KY499_09650 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase KY499_09655 PF13419 Haloacid dehalogenase-like hydrolase KY499_09670 PF01569 PAP2 superfamily KY499_09675 PF14437 MafB19-like deaminase KY499_09700 PF02899 Phage integrase, N-terminal SAM-like domain KY499_09700 PF00589 Phage integrase family KY499_09795 PF02903 Alpha amylase, N-terminal ig-like domain KY499_09795 PF16657 Maltogenic Amylase, C-terminal domain KY499_09795 PF00128 Alpha amylase, catalytic domain KY499_09800 PF01594 AI-2E family transporter KY499_09825 PF00270 DEAD/DEAH box helicase KY499_09825 PF08494 DEAD/H associated KY499_09825 PF00271 Helicase conserved C-terminal domain KY499_09830 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KY499_09830 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KY499_09840 PF00392 Bacterial regulatory proteins, gntR family KY499_09845 PF00849 RNA pseudouridylate synthase KY499_09850 PF09335 SNARE associated Golgi protein KY499_09870 PF00248 Aldo/keto reductase family KY499_09880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KY499_09880 PF02770 Acyl-CoA dehydrogenase, middle domain KY499_09880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KY499_09885 PF00106 short chain dehydrogenase KY499_09900 PF00528 Binding-protein-dependent transport system inner membrane component KY499_09905 PF00005 ABC transporter KY499_09905 PF08402 TOBE domain KY499_09915 PF01569 PAP2 superfamily KY499_09945 PF01702 Queuine tRNA-ribosyltransferase KY499_09970 PF08543 Phosphomethylpyrimidine kinase KY499_09980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KY499_09980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KY499_09980 PF00205 Thiamine pyrophosphate enzyme, central domain KY499_09990 PF00463 Isocitrate lyase family KY499_09995 PF01274 Malate synthase KY499_10015 PF00583 Acetyltransferase (GNAT) family KY499_10045 PF17101 Stealth protein CR1, conserved region 1 KY499_10045 PF11380 Stealth protein CR2, conserved region 2 KY499_10045 PF17102 Stealth protein CR3, conserved region 3 KY499_10045 PF17103 Stealth protein CR4, conserved region 4 KY499_10050 PF00149 Calcineurin-like phosphoesterase KY499_10055 PF08240 Alcohol dehydrogenase GroES-like domain KY499_10055 PF00107 Zinc-binding dehydrogenase KY499_10060 PF00255 Glutathione peroxidase KY499_10065 PF01464 Transglycosylase SLT domain KY499_10065 PF10145 Phage-related minor tail protein KY499_10065 PF01551 Peptidase family M23 KY499_10085 PF12169 DNA polymerase III subunits gamma and tau domain III KY499_10090 PF13662 Toprim domain KY499_10090 PF02132 RecR protein KY499_10095 PF13840 ACT domain KY499_10095 PF01842 ACT domain KY499_10095 PF00696 Amino acid kinase family KY499_10110 PF01047 MarR family KY499_10130 PF00082 Subtilase family KY499_10140 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KY499_10150 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KY499_10150 PF02769 AIR synthase related protein, C-terminal domain KY499_10150 PF00586 AIR synthase related protein, N-terminal domain KY499_10165 PF09348 Domain of unknown function (DUF1990) KY499_10170 PF04237 YjbR KY499_10175 PF13380 CoA binding domain KY499_10180 PF00005 ABC transporter KY499_10190 PF00528 Binding-protein-dependent transport system inner membrane component KY499_10210 PF13380 CoA binding domain KY499_10215 PF00709 Adenylosuccinate synthetase KY499_10235 PF01116 Fructose-bisphosphate aldolase class-II KY499_10245 PF13344 Haloacid dehalogenase-like hydrolase KY499_10260 PF00156 Phosphoribosyl transferase domain KY499_10265 PF01494 FAD binding domain KY499_10270 PF02540 NAD synthase KY499_10280 PF01144 Coenzyme A transferase KY499_10285 PF01144 Coenzyme A transferase KY499_10290 PF02803 Thiolase, C-terminal domain KY499_10290 PF00108 Thiolase, N-terminal domain KY499_10295 PF12796 Ankyrin repeats (3 copies) KY499_10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_10305 PF07730 Histidine kinase KY499_10310 PF00196 Bacterial regulatory proteins, luxR family KY499_10310 PF00072 Response regulator receiver domain KY499_10315 PF00391 PEP-utilising enzyme, mobile domain KY499_10315 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KY499_10320 PF00313 'Cold-shock' DNA-binding domain KY499_10335 PF00990 Diguanylate cyclase, GGDEF domain KY499_10340 PF00392 Bacterial regulatory proteins, gntR family KY499_10340 PF07729 FCD domain KY499_10360 PF00171 Aldehyde dehydrogenase family KY499_10370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KY499_10370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KY499_10370 PF02770 Acyl-CoA dehydrogenase, middle domain KY499_10375 PF00501 AMP-binding enzyme KY499_10375 PF13193 AMP-binding enzyme C-terminal domain KY499_10390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KY499_10390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KY499_10395 PF00378 Enoyl-CoA hydratase/isomerase KY499_10400 PF00171 Aldehyde dehydrogenase family KY499_10415 PF00356 Bacterial regulatory proteins, lacI family KY499_10420 PF00528 Binding-protein-dependent transport system inner membrane component KY499_10425 PF00528 Binding-protein-dependent transport system inner membrane component KY499_10455 PF03780 Asp23 family, cell envelope-related function KY499_10460 PF00754 F5/8 type C domain KY499_10460 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase KY499_10460 PF13088 BNR repeat-like domain KY499_10480 PF01810 LysE type translocator KY499_10485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY499_10485 PF03466 LysR substrate binding domain KY499_10490 PF00106 short chain dehydrogenase KY499_10495 PF00892 EamA-like transporter family KY499_10505 PF01545 Cation efflux family KY499_10515 PF00005 ABC transporter KY499_10525 PF00582 Universal stress protein family KY499_10540 PF00860 Permease family KY499_10545 PF00491 Arginase family KY499_10560 PF15608 PELOTA RNA binding domain KY499_10560 PF11202 Phosphoribosyl transferase (PRTase) KY499_10575 PF02342 TerD domain KY499_10585 PF05816 Toxic anion resistance protein (TelA) KY499_10590 PF02342 TerD domain KY499_10595 PF02342 TerD domain KY499_10610 PF00563 EAL domain KY499_10610 PF00990 Diguanylate cyclase, GGDEF domain KY499_10610 PF03707 Bacterial signalling protein N terminal repeat KY499_10615 PF00221 Aromatic amino acid lyase KY499_10635 PF08240 Alcohol dehydrogenase GroES-like domain KY499_10635 PF00107 Zinc-binding dehydrogenase KY499_10645 PF00083 Sugar (and other) transporter KY499_10665 PF00582 Universal stress protein family KY499_10670 PF08240 Alcohol dehydrogenase GroES-like domain KY499_10675 PF02358 Trehalose-phosphatase KY499_10675 PF03636 Glycosyl hydrolase family 65, N-terminal domain KY499_10675 PF03632 Glycosyl hydrolase family 65 central catalytic domain KY499_10675 PF03633 Glycosyl hydrolase family 65, C-terminal domain KY499_10685 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KY499_10685 PF02896 PEP-utilising enzyme, TIM barrel domain KY499_10685 PF00391 PEP-utilising enzyme, mobile domain KY499_10695 PF02585 GlcNAc-PI de-N-acetylase KY499_10705 PF01596 O-methyltransferase KY499_10710 PF01910 Thiamine-binding protein KY499_10745 PF03009 Glycerophosphoryl diester phosphodiesterase family KY499_10750 PF04286 Protein of unknown function (DUF445) KY499_10755 PF03746 LamB/YcsF family KY499_10765 PF03632 Glycosyl hydrolase family 65 central catalytic domain KY499_10765 PF03636 Glycosyl hydrolase family 65, N-terminal domain KY499_10765 PF03633 Glycosyl hydrolase family 65, C-terminal domain KY499_10770 PF13419 Haloacid dehalogenase-like hydrolase KY499_10790 PF00294 pfkB family carbohydrate kinase KY499_10795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KY499_10795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KY499_10805 PF02735 Ku70/Ku80 beta-barrel domain KY499_10810 PF04679 ATP dependent DNA ligase C terminal region KY499_10810 PF01068 ATP dependent DNA ligase domain KY499_10810 PF13298 DNA polymerase Ligase (LigD) KY499_10850 PF01116 Fructose-bisphosphate aldolase class-II KY499_10860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KY499_10860 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KY499_10875 PF02583 Metal-sensitive transcriptional repressor KY499_10880 PF07311 Dodecin KY499_10885 PF00248 Aldo/keto reductase family KY499_10890 PF04226 Transglycosylase associated protein KY499_10915 PF01384 Phosphate transporter family KY499_10920 PF00005 ABC transporter KY499_10925 PF00528 Binding-protein-dependent transport system inner membrane component KY499_10930 PF00528 Binding-protein-dependent transport system inner membrane component KY499_10935 PF12849 PBP superfamily domain KY499_10950 PF00487 Fatty acid desaturase KY499_10955 PF00175 Oxidoreductase NAD-binding domain KY499_10955 PF00111 2Fe-2S iron-sulfur cluster binding domain KY499_10955 PF00970 Oxidoreductase FAD-binding domain KY499_10965 PF03793 PASTA domain KY499_10965 PF00069 Protein kinase domain KY499_10970 PF00009 Elongation factor Tu GTP binding domain KY499_10970 PF16658 Class II release factor RF3, C-terminal domain KY499_10975 PF02457 DisA bacterial checkpoint controller nucleotide-binding KY499_10975 PF10635 DisA bacterial checkpoint controller linker region KY499_10975 PF00633 Helix-hairpin-helix motif KY499_10985 PF00730 HhH-GPD superfamily base excision DNA repair protein KY499_10985 PF00633 Helix-hairpin-helix motif KY499_11000 PF03610 PTS system fructose IIA component KY499_11005 PF02734 DAK2 domain KY499_11010 PF02733 Dak1 domain KY499_11015 PF00583 Acetyltransferase (GNAT) family KY499_11020 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KY499_11020 PF07676 WD40-like Beta Propeller Repeat KY499_11020 PF00326 Prolyl oligopeptidase family KY499_11025 PF07724 AAA domain (Cdc48 subfamily) KY499_11025 PF17871 AAA lid domain KY499_11025 PF02861 Clp amino terminal domain, pathogenicity island component KY499_11025 PF10431 C-terminal, D2-small domain, of ClpB protein KY499_11025 PF00004 ATPase family associated with various cellular activities (AAA) KY499_11030 PF11774 Lsr2 KY499_11050 PF00265 Thymidine kinase KY499_11060 PF07690 Major Facilitator Superfamily KY499_11065 PF02569 Pantoate-beta-alanine ligase KY499_11090 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KY499_11095 PF02152 Dihydroneopterin aldolase KY499_11100 PF00809 Pterin binding enzyme KY499_11105 PF01227 GTP cyclohydrolase I KY499_11110 PF01434 Peptidase family M41 KY499_11110 PF00004 ATPase family associated with various cellular activities (AAA) KY499_11110 PF17862 AAA+ lid domain KY499_11115 PF00156 Phosphoribosyl transferase domain KY499_11120 PF01171 PP-loop family KY499_11120 PF09179 TilS substrate binding domain KY499_11130 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KY499_11135 PF00719 Inorganic pyrophosphatase KY499_11155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KY499_11155 PF02403 Seryl-tRNA synthetase N-terminal domain KY499_11160 PF00781 Diacylglycerol kinase catalytic domain KY499_11170 PF01842 ACT domain KY499_11170 PF00800 Prephenate dehydratase KY499_11175 PF00581 Rhodanese-like domain KY499_11175 PF01206 Sulfurtransferase TusA KY499_11180 PF01425 Amidase KY499_11190 PF00107 Zinc-binding dehydrogenase KY499_11190 PF08240 Alcohol dehydrogenase GroES-like domain KY499_11195 PF00854 POT family KY499_11205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KY499_11205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KY499_11205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KY499_11205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KY499_11210 PF08448 PAS fold KY499_11210 PF00990 Diguanylate cyclase, GGDEF domain KY499_11220 PF00881 Nitroreductase family KY499_11225 PF00860 Permease family KY499_11245 PF02595 Glycerate kinase family KY499_11250 PF03009 Glycerophosphoryl diester phosphodiesterase family KY499_11270 PF03631 Virulence factor BrkB KY499_11300 PF06305 Lipopolysaccharide assembly protein A domain KY499_11305 PF01569 PAP2 superfamily KY499_11315 PF00294 pfkB family carbohydrate kinase KY499_11325 PF06965 Na+/H+ antiporter 1 KY499_11345 PF13411 MerR HTH family regulatory protein KY499_11345 PF07739 TipAS antibiotic-recognition domain KY499_11355 PF07687 Peptidase dimerisation domain KY499_11355 PF01546 Peptidase family M20/M25/M40 KY499_11360 PF07729 FCD domain KY499_11360 PF00392 Bacterial regulatory proteins, gntR family KY499_11365 PF00355 Rieske [2Fe-2S] domain KY499_11380 PF00528 Binding-protein-dependent transport system inner membrane component KY499_11385 PF00005 ABC transporter KY499_11390 PF00970 Oxidoreductase FAD-binding domain KY499_11390 PF00111 2Fe-2S iron-sulfur cluster binding domain KY499_11400 PF07969 Amidohydrolase family KY499_11405 PF00392 Bacterial regulatory proteins, gntR family KY499_11410 PF02423 Ornithine cyclodeaminase/mu-crystallin family KY499_11415 PF01979 Amidohydrolase family KY499_11430 PF01979 Amidohydrolase family KY499_11435 PF01177 Asp/Glu/Hydantoin racemase KY499_11440 PF07729 FCD domain KY499_11440 PF00392 Bacterial regulatory proteins, gntR family KY499_11450 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KY499_11455 PF00578 AhpC/TSA family KY499_11465 PF01979 Amidohydrolase family KY499_11470 PF02595 Glycerate kinase family KY499_11475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KY499_11475 PF00205 Thiamine pyrophosphate enzyme, central domain KY499_11475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KY499_11480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KY499_11480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KY499_11485 PF01261 Xylose isomerase-like TIM barrel KY499_11490 PF07883 Cupin domain KY499_11490 PF05899 Protein of unknown function (DUF861) KY499_11500 PF01274 Malate synthase KY499_11505 PF00390 Malic enzyme, N-terminal domain KY499_11505 PF03949 Malic enzyme, NAD binding domain KY499_11520 PF01014 Uricase KY499_11525 PF00551 Formyl transferase KY499_11535 PF04268 Sarcosine oxidase, gamma subunit family KY499_11540 PF01571 Aminomethyltransferase folate-binding domain KY499_11540 PF08669 Glycine cleavage T-protein C-terminal barrel domain KY499_11540 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_11540 PF17806 Sarcosine oxidase A3 domain KY499_11545 PF04267 Sarcosine oxidase, delta subunit family KY499_11555 PF00464 Serine hydroxymethyltransferase KY499_11560 PF00392 Bacterial regulatory proteins, gntR family KY499_11560 PF07729 FCD domain KY499_11570 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KY499_11570 PF00355 Rieske [2Fe-2S] domain KY499_11575 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_11575 PF14759 Reductase C-terminal KY499_11580 PF00355 Rieske [2Fe-2S] domain KY499_11585 PF08669 Glycine cleavage T-protein C-terminal barrel domain KY499_11585 PF01266 FAD dependent oxidoreductase KY499_11585 PF16350 FAD dependent oxidoreductase central domain KY499_11585 PF01571 Aminomethyltransferase folate-binding domain KY499_11590 PF08946 Osmosensory transporter coiled coil KY499_11590 PF00083 Sugar (and other) transporter KY499_11595 PF01321 Creatinase/Prolidase N-terminal domain KY499_11595 PF00557 Metallopeptidase family M24 KY499_11600 PF09339 IclR helix-turn-helix domain KY499_11600 PF01614 Bacterial transcriptional regulator KY499_11615 PF01522 Polysaccharide deacetylase KY499_11635 PF00576 HIUase/Transthyretin family KY499_11645 PF02293 AmiS/UreI family transporter KY499_11650 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KY499_11655 PF01177 Asp/Glu/Hydantoin racemase KY499_11660 PF01979 Amidohydrolase family KY499_11685 PF01566 Natural resistance-associated macrophage protein KY499_11690 PF07286 Protein of unknown function (DUF1445) KY499_11705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KY499_11705 PF00364 Biotin-requiring enzyme KY499_11705 PF00289 Biotin carboxylase, N-terminal domain KY499_11705 PF02785 Biotin carboxylase C-terminal domain KY499_11715 PF03746 LamB/YcsF family KY499_11725 PF00128 Alpha amylase, catalytic domain KY499_11725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KY499_11735 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KY499_11765 PF01593 Flavin containing amine oxidoreductase KY499_11780 PF12401 Protein of unknown function (DUF2662) KY499_11780 PF00498 FHA domain KY499_11785 PF16697 Inner membrane component of T3SS, cytoplasmic domain KY499_11795 PF01098 Cell cycle protein KY499_11805 PF00069 Protein kinase domain KY499_11815 PF00117 Glutamine amidotransferase class-I KY499_11820 PF06781 Cell division protein CrgA KY499_11825 PF03352 Methyladenine glycosylase KY499_11835 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KY499_11870 PF12089 Transmembrane domain of unknown function (DUF3566) KY499_11885 PF05258 Dna[CI] antecedent, DciA KY499_11890 PF02463 RecF/RecN/SMC N terminal domain KY499_11895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KY499_11895 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KY499_11900 PF00712 DNA polymerase III beta subunit, N-terminal domain KY499_11900 PF02767 DNA polymerase III beta subunit, central domain KY499_11900 PF02768 DNA polymerase III beta subunit, C-terminal domain KY499_11910 PF00468 Ribosomal protein L34 KY499_11915 PF00825 Ribonuclease P KY499_11920 PF01809 Putative membrane protein insertion efficiency factor KY499_11935 PF02527 rRNA small subunit methyltransferase G KY499_11940 PF13614 AAA domain KY499_11950 PF02371 Transposase IS116/IS110/IS902 family KY499_11950 PF01548 Transposase KY499_11960 PF01695 IstB-like ATP binding protein KY499_11970 PF00085 Thioredoxin KY499_11975 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_11985 PF03023 Lipid II flippase MurJ KY499_11990 PF00293 NUDIX domain KY499_11995 PF01966 HD domain KY499_11995 PF01743 Poly A polymerase head domain KY499_11995 PF12627 Probable RNA and SrmB- binding site of polymerase A KY499_12000 PF00300 Histidine phosphatase superfamily (branch 1) KY499_12015 PF00905 Penicillin binding protein transpeptidase domain KY499_12020 PF00202 Aminotransferase class-III KY499_12040 PF00005 ABC transporter KY499_12040 PF12848 ABC transporter KY499_12050 PF07690 Major Facilitator Superfamily KY499_12060 PF00005 ABC transporter KY499_12070 PF02127 Aminopeptidase I zinc metalloprotease (M18) KY499_12075 PF01250 Ribosomal protein S6 KY499_12080 PF00436 Single-strand binding protein family KY499_12085 PF01084 Ribosomal protein S18 KY499_12090 PF03948 Ribosomal protein L9, C-terminal domain KY499_12090 PF01281 Ribosomal protein L9, N-terminal domain KY499_12100 PF03358 NADPH-dependent FMN reductase KY499_12115 PF00772 DnaB-like helicase N terminal domain KY499_12115 PF03796 DnaB-like helicase C terminal domain KY499_12125 PF07681 DoxX KY499_12130 PF01554 MatE KY499_12155 PF00403 Heavy-metal-associated domain KY499_12165 PF02583 Metal-sensitive transcriptional repressor KY499_12185 PF02597 ThiS family KY499_12195 PF00128 Alpha amylase, catalytic domain KY499_12195 PF16657 Maltogenic Amylase, C-terminal domain KY499_12210 PF00781 Diacylglycerol kinase catalytic domain KY499_12220 PF01741 Large-conductance mechanosensitive channel, MscL KY499_12230 PF03061 Thioesterase superfamily KY499_12245 PF00206 Lyase KY499_12245 PF08328 Adenylosuccinate lyase C-terminal KY499_12260 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KY499_12265 PF00155 Aminotransferase class I and II KY499_12270 PF00676 Dehydrogenase E1 component KY499_12275 PF02779 Transketolase, pyrimidine binding domain KY499_12275 PF02780 Transketolase, C-terminal domain KY499_12280 PF02817 e3 binding domain KY499_12280 PF00364 Biotin-requiring enzyme KY499_12280 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KY499_12285 PF13193 AMP-binding enzyme C-terminal domain KY499_12285 PF00501 AMP-binding enzyme KY499_12295 PF00155 Aminotransferase class I and II KY499_12300 PF00528 Binding-protein-dependent transport system inner membrane component KY499_12305 PF12911 N-terminal TM domain of oligopeptide transport permease C KY499_12305 PF00528 Binding-protein-dependent transport system inner membrane component KY499_12310 PF00005 ABC transporter KY499_12310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KY499_12320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY499_12320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY499_12325 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KY499_12325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KY499_12345 PF05524 PEP-utilising enzyme, N-terminal KY499_12345 PF02896 PEP-utilising enzyme, TIM barrel domain KY499_12345 PF00391 PEP-utilising enzyme, mobile domain KY499_12360 PF08125 Mannitol dehydrogenase C-terminal domain KY499_12360 PF01232 Mannitol dehydrogenase Rossmann domain KY499_12365 PF07690 Major Facilitator Superfamily KY499_12375 PF17925 Tetracyclin repressor-like, C-terminal domain KY499_12375 PF00440 Bacterial regulatory proteins, tetR family KY499_12400 PF01037 Lrp/AsnC ligand binding domain KY499_12415 PF13291 ACT domain KY499_12415 PF04607 Region found in RelA / SpoT proteins KY499_12415 PF02824 TGS domain KY499_12420 PF01434 Peptidase family M41 KY499_12420 PF17862 AAA+ lid domain KY499_12420 PF00004 ATPase family associated with various cellular activities (AAA) KY499_12425 PF00324 Amino acid permease KY499_12430 PF10415 Fumarase C C-terminus KY499_12430 PF00206 Lyase KY499_12440 PF07729 FCD domain KY499_12440 PF00392 Bacterial regulatory proteins, gntR family KY499_12445 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KY499_12445 PF00056 lactate/malate dehydrogenase, NAD binding domain KY499_12480 PF00563 EAL domain KY499_12480 PF00990 Diguanylate cyclase, GGDEF domain KY499_12480 PF03707 Bacterial signalling protein N terminal repeat KY499_12480 PF13188 PAS domain KY499_12490 PF01479 S4 domain KY499_12495 PF07969 Amidohydrolase family KY499_12520 PF00248 Aldo/keto reductase family KY499_12535 PF02770 Acyl-CoA dehydrogenase, middle domain KY499_12535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KY499_12535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KY499_12580 PF00027 Cyclic nucleotide-binding domain KY499_12580 PF04960 Glutaminase KY499_12595 PF00528 Binding-protein-dependent transport system inner membrane component KY499_12600 PF00528 Binding-protein-dependent transport system inner membrane component KY499_12605 PF00232 Glycosyl hydrolase family 1 KY499_12610 PF00356 Bacterial regulatory proteins, lacI family KY499_12625 PF00830 Ribosomal L28 family KY499_12630 PF00471 Ribosomal protein L33 KY499_12635 PF00253 Ribosomal protein S14p/S29e KY499_12655 PF00356 Bacterial regulatory proteins, lacI family KY499_12680 PF00216 Bacterial DNA-binding protein KY499_12685 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KY499_12685 PF05425 Copper resistance protein D KY499_12690 PF00578 AhpC/TSA family KY499_12690 PF02683 Cytochrome C biogenesis protein transmembrane region KY499_12690 PF17991 Thioredoxin like C-terminal domain KY499_12715 PF00296 Luciferase-like monooxygenase KY499_12720 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KY499_12720 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KY499_12725 PF16874 Glycosyl hydrolase family 36 C-terminal domain KY499_12725 PF16875 Glycosyl hydrolase family 36 N-terminal domain KY499_12730 PF00455 DeoR C terminal sensor domain KY499_12730 PF08220 DeoR-like helix-turn-helix domain KY499_12735 PF00528 Binding-protein-dependent transport system inner membrane component KY499_12740 PF00528 Binding-protein-dependent transport system inner membrane component KY499_12755 PF00723 Glycosyl hydrolases family 15 KY499_12765 PF02371 Transposase IS116/IS110/IS902 family KY499_12765 PF01548 Transposase KY499_12775 PF02261 Aspartate decarboxylase KY499_12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY499_12780 PF03466 LysR substrate binding domain KY499_12785 PF00171 Aldehyde dehydrogenase family KY499_12820 PF00692 dUTPase KY499_12840 PF13244 Domain of unknown function (DUF4040) KY499_12840 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KY499_12840 PF00361 Proton-conducting membrane transporter KY499_12840 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KY499_12845 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KY499_12850 PF00361 Proton-conducting membrane transporter KY499_12860 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KY499_12865 PF03334 Na+/H+ antiporter subunit KY499_12875 PF09819 ABC-type cobalt transport system, permease component KY499_12880 PF00005 ABC transporter KY499_12890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KY499_12895 PF04107 Glutamate-cysteine ligase family 2(GCS2) KY499_12900 PF01053 Cys/Met metabolism PLP-dependent enzyme KY499_12925 PF13091 PLD-like domain KY499_12925 PF13396 Phospholipase_D-nuclease N-terminal KY499_12930 PF04715 Anthranilate synthase component I, N terminal region KY499_12930 PF00425 chorismate binding enzyme KY499_12930 PF00117 Glutamine amidotransferase class-I KY499_12935 PF01451 Low molecular weight phosphotyrosine protein phosphatase KY499_12940 PF01810 LysE type translocator KY499_12945 PF08241 Methyltransferase domain KY499_12965 PF00012 Hsp70 protein KY499_12970 PF01025 GrpE KY499_12975 PF01556 DnaJ C terminal domain KY499_12975 PF00684 DnaJ central domain KY499_12975 PF00226 DnaJ domain KY499_12980 PF13411 MerR HTH family regulatory protein KY499_12985 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KY499_12985 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KY499_12990 PF12419 SNF2 Helicase protein KY499_12990 PF00271 Helicase conserved C-terminal domain KY499_12990 PF00176 SNF2 family N-terminal domain KY499_13020 PF02390 Putative methyltransferase KY499_13025 PF07690 Major Facilitator Superfamily KY499_13030 PF07690 Major Facilitator Superfamily KY499_13040 PF02371 Transposase IS116/IS110/IS902 family KY499_13040 PF01548 Transposase KY499_13045 PF07745 Glycosyl hydrolase family 53 KY499_13050 PF07745 Glycosyl hydrolase family 53 KY499_13070 PF16363 GDP-mannose 4,6 dehydratase KY499_13080 PF01370 NAD dependent epimerase/dehydratase family KY499_13100 PF00753 Metallo-beta-lactamase superfamily KY499_13105 PF00248 Aldo/keto reductase family KY499_13110 PF00893 Small Multidrug Resistance protein KY499_13115 PF00893 Small Multidrug Resistance protein KY499_13120 PF05962 HutD KY499_13125 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KY499_13145 PF00535 Glycosyl transferase family 2 KY499_13190 PF01565 FAD binding domain KY499_13190 PF09265 Cytokinin dehydrogenase 1, FAD and cytokinin binding KY499_13195 PF03459 TOBE domain KY499_13205 PF00528 Binding-protein-dependent transport system inner membrane component KY499_13210 PF00005 ABC transporter KY499_13210 PF03459 TOBE domain KY499_13215 PF02627 Carboxymuconolactone decarboxylase family KY499_13220 PF00004 ATPase family associated with various cellular activities (AAA) KY499_13220 PF07724 AAA domain (Cdc48 subfamily) KY499_13220 PF17871 AAA lid domain KY499_13220 PF02861 Clp amino terminal domain, pathogenicity island component KY499_13220 PF10431 C-terminal, D2-small domain, of ClpB protein KY499_13240 PF02769 AIR synthase related protein, C-terminal domain KY499_13240 PF00586 AIR synthase related protein, N-terminal domain KY499_13245 PF00156 Phosphoribosyl transferase domain KY499_13255 PF01209 ubiE/COQ5 methyltransferase family KY499_13265 PF00578 AhpC/TSA family KY499_13275 PF00561 alpha/beta hydrolase fold KY499_13305 PF00664 ABC transporter transmembrane region KY499_13305 PF00005 ABC transporter KY499_13310 PF13439 Glycosyltransferase Family 4 KY499_13310 PF00534 Glycosyl transferases group 1 KY499_13315 PF13439 Glycosyltransferase Family 4 KY499_13315 PF00534 Glycosyl transferases group 1 KY499_13325 PF18719 ArlS sensor domain KY499_13325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_13325 PF00512 His Kinase A (phospho-acceptor) domain KY499_13330 PF00072 Response regulator receiver domain KY499_13330 PF00486 Transcriptional regulatory protein, C terminal KY499_13340 PF00085 Thioredoxin KY499_13345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KY499_13355 PF00664 ABC transporter transmembrane region KY499_13355 PF00005 ABC transporter KY499_13360 PF00005 ABC transporter KY499_13360 PF00664 ABC transporter transmembrane region KY499_13370 PF00563 EAL domain KY499_13370 PF17154 Gammaproteobacterial periplasmic sensor domain KY499_13370 PF00990 Diguanylate cyclase, GGDEF domain KY499_13370 PF00672 HAMP domain KY499_13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_13380 PF13426 PAS domain KY499_13380 PF00072 Response regulator receiver domain KY499_13400 PF02310 B12 binding domain KY499_13400 PF02607 B12 binding domain KY499_13400 PF00809 Pterin binding enzyme KY499_13400 PF02574 Homocysteine S-methyltransferase KY499_13400 PF02965 Vitamin B12 dependent methionine synthase, activation domain KY499_13425 PF17200 Single Cache domain 2 KY499_13425 PF07730 Histidine kinase KY499_13430 PF00196 Bacterial regulatory proteins, luxR family KY499_13430 PF00072 Response regulator receiver domain KY499_13440 PF00300 Histidine phosphatase superfamily (branch 1) KY499_13445 PF01872 RibD C-terminal domain KY499_13450 PF17863 AAA lid domain KY499_13450 PF01078 Magnesium chelatase, subunit ChlI KY499_13475 PF00766 Electron transfer flavoprotein FAD-binding domain KY499_13475 PF01012 Electron transfer flavoprotein domain KY499_13480 PF01012 Electron transfer flavoprotein domain KY499_13510 PF00472 RF-1 domain KY499_13510 PF03462 PCRF domain KY499_13525 PF12146 Serine aminopeptidase, S33 KY499_13540 PF07690 Major Facilitator Superfamily KY499_13545 PF00376 MerR family regulatory protein KY499_13545 PF09278 MerR, DNA binding KY499_13555 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_13555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KY499_13560 PF08386 TAP-like protein KY499_13560 PF00561 alpha/beta hydrolase fold KY499_13565 PF00557 Metallopeptidase family M24 KY499_13565 PF01321 Creatinase/Prolidase N-terminal domain KY499_13575 PF00291 Pyridoxal-phosphate dependent enzyme KY499_13580 PF07687 Peptidase dimerisation domain KY499_13580 PF01546 Peptidase family M20/M25/M40 KY499_13585 PF01042 Endoribonuclease L-PSP KY499_13590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY499_13590 PF03466 LysR substrate binding domain KY499_13595 PF01042 Endoribonuclease L-PSP KY499_13600 PF00497 Bacterial extracellular solute-binding proteins, family 3 KY499_13605 PF00528 Binding-protein-dependent transport system inner membrane component KY499_13610 PF00005 ABC transporter KY499_13620 PF07729 FCD domain KY499_13620 PF00392 Bacterial regulatory proteins, gntR family KY499_13625 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase KY499_13630 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KY499_13630 PF00367 phosphotransferase system, EIIB KY499_13630 PF02378 Phosphotransferase system, EIIC KY499_13635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KY499_13645 PF03123 CAT RNA binding domain KY499_13645 PF00874 PRD domain KY499_13650 PF00381 PTS HPr component phosphorylation site KY499_13655 PF01979 Amidohydrolase family KY499_13660 PF00970 Oxidoreductase FAD-binding domain KY499_13660 PF00111 2Fe-2S iron-sulfur cluster binding domain KY499_13665 PF00221 Aromatic amino acid lyase KY499_13675 PF00067 Cytochrome P450 KY499_13685 PF00501 AMP-binding enzyme KY499_13685 PF13193 AMP-binding enzyme C-terminal domain KY499_13690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY499_13690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY499_13695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY499_13695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY499_13700 PF00005 ABC transporter KY499_13705 PF02653 Branched-chain amino acid transport system / permease component KY499_13715 PF00356 Bacterial regulatory proteins, lacI family KY499_13720 PF01261 Xylose isomerase-like TIM barrel KY499_13725 PF00294 pfkB family carbohydrate kinase KY499_13735 PF04962 KduI/IolB family KY499_13745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KY499_13745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KY499_13745 PF00205 Thiamine pyrophosphate enzyme, central domain KY499_13760 PF00365 Phosphofructokinase KY499_13765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KY499_13765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KY499_13770 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KY499_13780 PF01179 Copper amine oxidase, enzyme domain KY499_13780 PF02728 Copper amine oxidase, N3 domain KY499_13780 PF02727 Copper amine oxidase, N2 domain KY499_13790 PF00970 Oxidoreductase FAD-binding domain KY499_13790 PF00111 2Fe-2S iron-sulfur cluster binding domain KY499_13795 PF00970 Oxidoreductase FAD-binding domain KY499_13795 PF00111 2Fe-2S iron-sulfur cluster binding domain KY499_13795 PF00175 Oxidoreductase NAD-binding domain KY499_13825 PF07729 FCD domain KY499_13825 PF00392 Bacterial regulatory proteins, gntR family KY499_13830 PF01380 SIS domain KY499_13835 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KY499_13845 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KY499_13845 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KY499_13855 PF00072 Response regulator receiver domain KY499_13855 PF00196 Bacterial regulatory proteins, luxR family KY499_13860 PF02780 Transketolase, C-terminal domain KY499_13860 PF00456 Transketolase, thiamine diphosphate binding domain KY499_13860 PF02779 Transketolase, pyrimidine binding domain KY499_13865 PF00923 Transaldolase/Fructose-6-phosphate aldolase KY499_13870 PF00834 Ribulose-phosphate 3 epimerase family KY499_13875 PF02502 Ribose/Galactose Isomerase KY499_13890 PF13520 Amino acid permease KY499_13895 PF02727 Copper amine oxidase, N2 domain KY499_13895 PF01179 Copper amine oxidase, enzyme domain KY499_13895 PF02728 Copper amine oxidase, N3 domain KY499_13930 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KY499_13935 PF01979 Amidohydrolase family KY499_13940 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase KY499_13945 PF00480 ROK family KY499_13950 PF00701 Dihydrodipicolinate synthetase family KY499_13960 PF00005 ABC transporter KY499_13960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KY499_13965 PF00528 Binding-protein-dependent transport system inner membrane component KY499_13970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KY499_13975 PF16154 Domain of unknown function (DUF4862) KY499_13980 PF00754 F5/8 type C domain KY499_13980 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase KY499_13980 PF13088 BNR repeat-like domain KY499_14000 PF00999 Sodium/hydrogen exchanger family KY499_14015 PF00082 Subtilase family KY499_14020 PF07885 Ion channel KY499_14025 PF00296 Luciferase-like monooxygenase KY499_14030 PF00909 Ammonium Transporter Family KY499_14035 PF10944 Protein of unknown function (DUF2630) KY499_14045 PF13520 Amino acid permease KY499_14050 PF10011 Predicted membrane protein (DUF2254) KY499_14065 PF00582 Universal stress protein family KY499_14075 PF00248 Aldo/keto reductase family KY499_14100 PF13411 MerR HTH family regulatory protein KY499_14105 PF00011 Hsp20/alpha crystallin family KY499_14120 PF00232 Glycosyl hydrolase family 1 KY499_14130 PF00723 Glycosyl hydrolases family 15 KY499_14160 PF02844 Phosphoribosylglycinamide synthetase, N domain KY499_14160 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KY499_14160 PF02843 Phosphoribosylglycinamide synthetase, C domain KY499_14165 PF01259 SAICAR synthetase KY499_14185 PF00005 ABC transporter KY499_14185 PF00664 ABC transporter transmembrane region KY499_14190 PF00005 ABC transporter KY499_14190 PF00664 ABC transporter transmembrane region KY499_14195 PF00149 Calcineurin-like phosphoesterase KY499_14200 PF00912 Transglycosylase KY499_14200 PF00905 Penicillin binding protein transpeptidase domain KY499_14220 PF13545 Crp-like helix-turn-helix domain KY499_14220 PF00027 Cyclic nucleotide-binding domain KY499_14225 PF02674 Colicin V production protein KY499_14235 PF01220 Dehydroquinase class II KY499_14245 PF01593 Flavin containing amine oxidoreductase KY499_14260 PF00633 Helix-hairpin-helix motif KY499_14260 PF00730 HhH-GPD superfamily base excision DNA repair protein KY499_14260 PF10576 Iron-sulfur binding domain of endonuclease III KY499_14265 PF00293 NUDIX domain KY499_14275 PF00476 DNA polymerase family A KY499_14275 PF01612 3'-5' exonuclease KY499_14275 PF01367 5'-3' exonuclease, C-terminal SAM fold KY499_14275 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KY499_14285 PF00437 Type II/IV secretion system protein KY499_14330 PF17773 UPF0176 acylphosphatase like domain KY499_14330 PF12368 Rhodanase C-terminal KY499_14345 PF05175 Methyltransferase small domain KY499_14355 PF01131 DNA topoisomerase KY499_14355 PF13368 Topoisomerase C-terminal repeat KY499_14355 PF01751 Toprim domain KY499_14365 PF02541 Ppx/GppA phosphatase family KY499_14370 PF03807 NADP oxidoreductase coenzyme F420-dependent KY499_14370 PF14748 Pyrroline-5-carboxylate reductase dimerisation KY499_14375 PF02080 TrkA-C domain KY499_14375 PF02254 TrkA-N domain KY499_14380 PF02386 Cation transport protein KY499_14385 PF00850 Histone deacetylase domain KY499_14405 PF12728 Helix-turn-helix domain KY499_14425 PF06971 Putative DNA-binding protein N-terminus KY499_14425 PF02629 CoA binding domain KY499_14440 PF04264 YceI-like domain KY499_14445 PF00300 Histidine phosphatase superfamily (branch 1) KY499_14450 PF00578 AhpC/TSA family KY499_14455 PF02683 Cytochrome C biogenesis protein transmembrane region KY499_14485 PF01040 UbiA prenyltransferase family KY499_14490 PF13193 AMP-binding enzyme C-terminal domain KY499_14490 PF00501 AMP-binding enzyme KY499_14495 PF00378 Enoyl-CoA hydratase/isomerase KY499_14500 PF02517 CPBP intramembrane metalloprotease KY499_14505 PF01297 Zinc-uptake complex component A periplasmic KY499_14510 PF00005 ABC transporter KY499_14515 PF00950 ABC 3 transport family KY499_14525 PF01738 Dienelactone hydrolase family KY499_14530 PF05532 CsbD-like KY499_14550 PF00378 Enoyl-CoA hydratase/isomerase KY499_14555 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KY499_14555 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KY499_14575 PF13350 Tyrosine phosphatase family KY499_14585 PF03061 Thioesterase superfamily KY499_14590 PF00171 Aldehyde dehydrogenase family KY499_14590 PF01575 MaoC like domain KY499_14615 PF00501 AMP-binding enzyme KY499_14615 PF14535 AMP-binding enzyme C-terminal domain KY499_14620 PF03061 Thioesterase superfamily KY499_14635 PF00871 Acetokinase family KY499_14640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KY499_14640 PF00391 PEP-utilising enzyme, mobile domain KY499_14655 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KY499_14655 PF00326 Prolyl oligopeptidase family KY499_14660 PF03816 Cell envelope-related transcriptional attenuator domain KY499_14670 PF05138 Phenylacetic acid catabolic protein KY499_14675 PF06243 Phenylacetic acid degradation B KY499_14680 PF05138 Phenylacetic acid catabolic protein KY499_14685 PF01883 Iron-sulfur cluster assembly protein KY499_14690 PF00970 Oxidoreductase FAD-binding domain KY499_14690 PF00175 Oxidoreductase NAD-binding domain KY499_14690 PF00111 2Fe-2S iron-sulfur cluster binding domain KY499_14695 PF00378 Enoyl-CoA hydratase/isomerase KY499_14700 PF00483 Nucleotidyl transferase KY499_14710 PF01037 Lrp/AsnC ligand binding domain KY499_14715 PF00676 Dehydrogenase E1 component KY499_14725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KY499_14725 PF00364 Biotin-requiring enzyme KY499_14725 PF02817 e3 binding domain KY499_14730 PF01263 Aldose 1-epimerase KY499_14735 PF01047 MarR family KY499_14735 PF00480 ROK family KY499_14750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KY499_14750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KY499_14770 PF13280 WYL domain KY499_14770 PF08279 HTH domain KY499_14775 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY499_14775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY499_14795 PF00528 Binding-protein-dependent transport system inner membrane component KY499_14800 PF00528 Binding-protein-dependent transport system inner membrane component KY499_14805 PF01547 Bacterial extracellular solute-binding protein KY499_14810 PF00356 Bacterial regulatory proteins, lacI family KY499_14835 PF02502 Ribose/Galactose Isomerase KY499_14840 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KY499_14840 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KY499_14850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KY499_14860 PF00121 Triosephosphate isomerase KY499_14865 PF01757 Acyltransferase family KY499_14870 PF01757 Acyltransferase family KY499_14895 PF00251 Glycosyl hydrolases family 32 N-terminal domain KY499_14895 PF08244 Glycosyl hydrolases family 32 C terminal KY499_14900 PF18374 Enolase N-terminal domain-like KY499_14900 PF13378 Enolase C-terminal domain-like KY499_14915 PF03485 Arginyl tRNA synthetase N terminal domain KY499_14915 PF00750 tRNA synthetases class I (R) KY499_14915 PF05746 DALR anticodon binding domain KY499_14920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KY499_14920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KY499_14930 PF00005 ABC transporter KY499_14935 PF00528 Binding-protein-dependent transport system inner membrane component KY499_14945 PF00425 chorismate binding enzyme KY499_14950 PF01209 ubiE/COQ5 methyltransferase family KY499_14955 PF01494 FAD binding domain KY499_14960 PF00348 Polyprenyl synthetase KY499_14970 PF03458 UPF0126 domain KY499_14985 PF01507 Phosphoadenosine phosphosulfate reductase family KY499_14990 PF01507 Phosphoadenosine phosphosulfate reductase family KY499_14995 PF00009 Elongation factor Tu GTP binding domain KY499_15005 PF00005 ABC transporter KY499_15015 PF00291 Pyridoxal-phosphate dependent enzyme KY499_15025 PF10414 Sirohaem synthase dimerisation region KY499_15025 PF14824 Sirohaem biosynthesis protein central KY499_15025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KY499_15030 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_15055 PF00392 Bacterial regulatory proteins, gntR family KY499_15055 PF07729 FCD domain KY499_15070 PF00171 Aldehyde dehydrogenase family KY499_15075 PF00202 Aminotransferase class-III KY499_15080 PF13936 Helix-turn-helix domain KY499_15080 PF00665 Integrase core domain KY499_15090 PF00582 Universal stress protein family KY499_15095 PF00892 EamA-like transporter family KY499_15100 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_15110 PF00171 Aldehyde dehydrogenase family KY499_15115 PF08240 Alcohol dehydrogenase GroES-like domain KY499_15115 PF00107 Zinc-binding dehydrogenase KY499_15125 PF13520 Amino acid permease KY499_15135 PF00199 Catalase KY499_15135 PF06628 Catalase-related immune-responsive KY499_15140 PF01475 Ferric uptake regulator family KY499_15145 PF01435 Peptidase family M48 KY499_15155 PF04461 Protein of unknown function (DUF520) KY499_15205 PF00005 ABC transporter KY499_15205 PF13732 Domain of unknown function (DUF4162) KY499_15210 PF00085 Thioredoxin KY499_15220 PF00501 AMP-binding enzyme KY499_15220 PF13193 AMP-binding enzyme C-terminal domain KY499_15235 PF00571 CBS domain KY499_15235 PF00291 Pyridoxal-phosphate dependent enzyme KY499_15245 PF09594 Glycosyltransferase family 87 KY499_15255 PF03880 DbpA RNA binding domain KY499_15255 PF00270 DEAD/DEAH box helicase KY499_15255 PF00271 Helicase conserved C-terminal domain KY499_15285 PF00480 ROK family KY499_15290 PF00128 Alpha amylase, catalytic domain KY499_15295 PF00248 Aldo/keto reductase family KY499_15310 PF00916 Sulfate permease family KY499_15310 PF01740 STAS domain KY499_15320 PF13452 N-terminal half of MaoC dehydratase KY499_15330 PF07690 Major Facilitator Superfamily KY499_15345 PF01118 Semialdehyde dehydrogenase, NAD binding domain KY499_15345 PF02774 Semialdehyde dehydrogenase, dimerisation domain KY499_15355 PF00186 Dihydrofolate reductase KY499_15360 PF00303 Thymidylate synthase KY499_15365 PF00300 Histidine phosphatase superfamily (branch 1) KY499_15365 PF00293 NUDIX domain KY499_15370 PF13090 Polyphosphate kinase C-terminal domain 2 KY499_15370 PF17941 Polyphosphate kinase C-terminal domain 1 KY499_15370 PF13089 Polyphosphate kinase N-terminal domain KY499_15370 PF02503 Polyphosphate kinase middle domain KY499_15375 PF00583 Acetyltransferase (GNAT) family KY499_15390 PF08768 Domain of unknown function (DUF1794) KY499_15395 PF01566 Natural resistance-associated macrophage protein KY499_15395 PF03358 NADPH-dependent FMN reductase KY499_15400 PF01571 Aminomethyltransferase folate-binding domain KY499_15410 PF07690 Major Facilitator Superfamily KY499_15420 PF00365 Phosphofructokinase KY499_15445 PF00196 Bacterial regulatory proteins, luxR family KY499_15445 PF00072 Response regulator receiver domain KY499_15450 PF00155 Aminotransferase class I and II KY499_15460 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KY499_15465 PF02357 Transcription termination factor nusG KY499_15470 PF00298 Ribosomal protein L11, RNA binding domain KY499_15470 PF03946 Ribosomal protein L11, N-terminal domain KY499_15475 PF00687 Ribosomal protein L1p/L10e family KY499_15485 PF00466 Ribosomal protein L10 KY499_15490 PF00542 Ribosomal protein L7/L12 C-terminal domain KY499_15490 PF16320 Ribosomal protein L7/L12 dimerisation domain KY499_15495 PF04073 Aminoacyl-tRNA editing domain KY499_15495 PF03129 Anticodon binding domain KY499_15495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KY499_15505 PF04563 RNA polymerase beta subunit KY499_15505 PF04561 RNA polymerase Rpb2, domain 2 KY499_15505 PF04565 RNA polymerase Rpb2, domain 3 KY499_15505 PF04560 RNA polymerase Rpb2, domain 7 KY499_15505 PF00562 RNA polymerase Rpb2, domain 6 KY499_15505 PF10385 RNA polymerase beta subunit external 1 domain KY499_15515 PF00164 Ribosomal protein S12/S23 KY499_15520 PF00177 Ribosomal protein S7p/S5e KY499_15525 PF00679 Elongation factor G C-terminus KY499_15525 PF14492 Elongation Factor G, domain II KY499_15525 PF00009 Elongation factor Tu GTP binding domain KY499_15525 PF03144 Elongation factor Tu domain 2 KY499_15525 PF03764 Elongation factor G, domain IV KY499_15530 PF00009 Elongation factor Tu GTP binding domain KY499_15530 PF03144 Elongation factor Tu domain 2 KY499_15530 PF03143 Elongation factor Tu C-terminal domain KY499_15535 PF00232 Glycosyl hydrolase family 1 KY499_15540 PF00338 Ribosomal protein S10p/S20e KY499_15545 PF00297 Ribosomal protein L3 KY499_15550 PF00573 Ribosomal protein L4/L1 family KY499_15555 PF00276 Ribosomal protein L23 KY499_15565 PF00203 Ribosomal protein S19 KY499_15570 PF00237 Ribosomal protein L22p/L17e KY499_15575 PF07650 KH domain KY499_15575 PF00189 Ribosomal protein S3, C-terminal domain KY499_15580 PF00252 Ribosomal protein L16p/L10e KY499_15585 PF00831 Ribosomal L29 protein KY499_15590 PF00366 Ribosomal protein S17 KY499_15595 PF00238 Ribosomal protein L14p/L23e KY499_15600 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KY499_15605 PF00281 Ribosomal protein L5 KY499_15605 PF00673 ribosomal L5P family C-terminus KY499_15610 PF00410 Ribosomal protein S8 KY499_15615 PF00347 Ribosomal protein L6 KY499_15625 PF00333 Ribosomal protein S5, N-terminal domain KY499_15625 PF03719 Ribosomal protein S5, C-terminal domain KY499_15630 PF00327 Ribosomal protein L30p/L7e KY499_15635 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KY499_15650 PF00557 Metallopeptidase family M24 KY499_15655 PF03576 Peptidase family S58 KY499_15660 PF01176 Translation initiation factor 1A / IF-1 KY499_15665 PF00444 Ribosomal protein L36 KY499_15670 PF00416 Ribosomal protein S13/S18 KY499_15675 PF00411 Ribosomal protein S11 KY499_15680 PF01000 RNA polymerase Rpb3/RpoA insert domain KY499_15680 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KY499_15680 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KY499_15685 PF01196 Ribosomal protein L17 KY499_15695 PF00072 Response regulator receiver domain KY499_15695 PF13426 PAS domain KY499_15695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_15695 PF08448 PAS fold KY499_15695 PF00512 His Kinase A (phospho-acceptor) domain KY499_15700 PF00072 Response regulator receiver domain KY499_15700 PF00486 Transcriptional regulatory protein, C terminal KY499_15720 PF00437 Type II/IV secretion system protein KY499_15725 PF10609 NUBPL iron-transfer P-loop NTPase KY499_15735 PF06750 Bacterial Peptidase A24 N-terminal domain KY499_15735 PF01478 Type IV leader peptidase family KY499_15740 PF00572 Ribosomal protein L13 KY499_15745 PF00380 Ribosomal protein S9/S16 KY499_15750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KY499_15750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KY499_15750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KY499_15750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KY499_15755 PF01741 Large-conductance mechanosensitive channel, MscL KY499_15760 PF02557 D-alanyl-D-alanine carboxypeptidase KY499_15765 PF00485 Phosphoribulokinase / Uridine kinase family KY499_15770 PF01380 SIS domain KY499_15775 PF01648 4'-phosphopantetheinyl transferase superfamily KY499_15780 PF01256 Carbohydrate kinase KY499_15780 PF03853 YjeF-related protein N-terminus KY499_15785 PF00128 Alpha amylase, catalytic domain KY499_15785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KY499_15790 PF00128 Alpha amylase, catalytic domain KY499_15795 PF00128 Alpha amylase, catalytic domain KY499_15795 PF11941 Domain of unknown function (DUF3459) KY499_15805 PF01658 Myo-inositol-1-phosphate synthase KY499_15825 PF01268 Formate--tetrahydrofolate ligase KY499_15830 PF00534 Glycosyl transferases group 1 KY499_15830 PF13439 Glycosyltransferase Family 4 KY499_15840 PF02056 Family 4 glycosyl hydrolase KY499_15840 PF11975 Family 4 glycosyl hydrolase C-terminal domain KY499_15850 PF00842 Alanine racemase, C-terminal domain KY499_15850 PF01168 Alanine racemase, N-terminal domain KY499_15855 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KY499_15860 PF00814 Glycoprotease family KY499_15870 PF00814 Glycoprotease family KY499_15880 PF03358 NADPH-dependent FMN reductase KY499_15885 PF04107 Glutamate-cysteine ligase family 2(GCS2) KY499_15895 PF08501 Shikimate dehydrogenase substrate binding domain KY499_15900 PF18096 THUMP domain-like KY499_15905 PF00166 Chaperonin 10 Kd subunit KY499_15910 PF00118 TCP-1/cpn60 chaperonin family KY499_15915 PF01757 Acyltransferase family KY499_15920 PF00571 CBS domain KY499_15920 PF00478 IMP dehydrogenase / GMP reductase domain KY499_15925 PF00082 Subtilase family KY499_15925 PF04151 Bacterial pre-peptidase C-terminal domain KY499_15930 PF00478 IMP dehydrogenase / GMP reductase domain KY499_15935 PF01266 FAD dependent oxidoreductase KY499_15935 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KY499_15955 PF00117 Glutamine amidotransferase class-I KY499_15955 PF00958 GMP synthase C terminal domain KY499_15955 PF02540 NAD synthase KY499_15960 PF13086 AAA domain KY499_15960 PF13087 AAA domain KY499_15960 PF13195 Protein of unknown function (DUF4011) KY499_15980 PF00483 Nucleotidyl transferase KY499_16005 PF00202 Aminotransferase class-III KY499_16015 PF01209 ubiE/COQ5 methyltransferase family KY499_16020 PF04055 Radical SAM superfamily KY499_16020 PF06463 Molybdenum Cofactor Synthesis C KY499_16030 PF00501 AMP-binding enzyme KY499_16030 PF00668 Condensation domain KY499_16030 PF00550 Phosphopantetheine attachment site KY499_16030 PF13193 AMP-binding enzyme C-terminal domain KY499_16035 PF00501 AMP-binding enzyme KY499_16035 PF00668 Condensation domain KY499_16035 PF00550 Phosphopantetheine attachment site KY499_16035 PF13193 AMP-binding enzyme C-terminal domain KY499_16050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KY499_16070 PF00270 DEAD/DEAH box helicase KY499_16070 PF00271 Helicase conserved C-terminal domain KY499_16070 PF09369 Domain of unknown function (DUF1998) KY499_16075 PF00271 Helicase conserved C-terminal domain KY499_16075 PF12137 RNA polymerase recycling family C-terminal KY499_16075 PF00176 SNF2 family N-terminal domain KY499_16075 PF18339 RapA N-terminal Tudor like domain 1 KY499_16075 PF18337 RapA N-terminal Tudor like domain KY499_16080 PF12161 HsdM N-terminal domain KY499_16080 PF02384 N-6 DNA Methylase KY499_16090 PF07728 AAA domain (dynein-related subfamily) KY499_16090 PF12102 Domain of unknown function (DUF3578) KY499_16110 PF00589 Phage integrase family KY499_16145 PF00589 Phage integrase family KY499_16145 PF02899 Phage integrase, N-terminal SAM-like domain KY499_16180 PF12848 ABC transporter KY499_16180 PF00005 ABC transporter KY499_16200 PF01544 CorA-like Mg2+ transporter protein KY499_16225 PF01869 BadF/BadG/BcrA/BcrD ATPase family KY499_16240 PF00005 ABC transporter KY499_16240 PF00571 CBS domain KY499_16245 PF00528 Binding-protein-dependent transport system inner membrane component KY499_16250 PF00528 Binding-protein-dependent transport system inner membrane component KY499_16265 PF03976 Polyphosphate kinase 2 (PPK2) KY499_16270 PF02609 Exonuclease VII small subunit KY499_16275 PF13742 OB-fold nucleic acid binding domain KY499_16275 PF02601 Exonuclease VII, large subunit KY499_16290 PF02646 RmuC family KY499_16295 PF06071 Protein of unknown function (DUF933) KY499_16295 PF01926 50S ribosome-binding GTPase KY499_16305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KY499_16310 PF00528 Binding-protein-dependent transport system inner membrane component KY499_16320 PF00005 ABC transporter KY499_16320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KY499_16345 PF01548 Transposase KY499_16345 PF02371 Transposase IS116/IS110/IS902 family KY499_16355 PF00037 4Fe-4S binding domain KY499_16370 PF00440 Bacterial regulatory proteins, tetR family KY499_16370 PF13977 BetI-type transcriptional repressor, C-terminal KY499_16385 PF14602 Hexapeptide repeat of succinyl-transferase KY499_16385 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle KY499_16390 PF07687 Peptidase dimerisation domain KY499_16390 PF01546 Peptidase family M20/M25/M40 KY499_16395 PF00528 Binding-protein-dependent transport system inner membrane component KY499_16400 PF00528 Binding-protein-dependent transport system inner membrane component KY499_16405 PF00497 Bacterial extracellular solute-binding proteins, family 3 KY499_16410 PF00005 ABC transporter KY499_16435 PF01596 O-methyltransferase KY499_16440 PF08281 Sigma-70, region 4 KY499_16440 PF04542 Sigma-70 region 2 KY499_16450 PF02416 mttA/Hcf106 family KY499_16455 PF10609 NUBPL iron-transfer P-loop NTPase KY499_16455 PF01883 Iron-sulfur cluster assembly protein KY499_16465 PF03448 MgtE intracellular N domain KY499_16465 PF01769 Divalent cation transporter KY499_16465 PF00571 CBS domain KY499_16475 PF00557 Metallopeptidase family M24 KY499_16475 PF05195 Aminopeptidase P, N-terminal domain KY499_16480 PF02811 PHP domain KY499_16485 PF01555 DNA methylase KY499_16490 PF00271 Helicase conserved C-terminal domain KY499_16490 PF00270 DEAD/DEAH box helicase KY499_16500 PF02581 Thiamine monophosphate synthase KY499_16505 PF05690 Thiazole biosynthesis protein ThiG KY499_16505 PF01266 FAD dependent oxidoreductase KY499_16515 PF05690 Thiazole biosynthesis protein ThiG KY499_16520 PF01329 Pterin 4 alpha carbinolamine dehydratase KY499_16540 PF00581 Rhodanese-like domain KY499_16540 PF00899 ThiF family KY499_16545 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KY499_16545 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KY499_16545 PF01488 Shikimate / quinate 5-dehydrogenase KY499_16550 PF01208 Uroporphyrinogen decarboxylase (URO-D) KY499_16560 PF06778 Chlorite dismutase KY499_16565 PF00762 Ferrochelatase KY499_16580 PF00490 Delta-aminolevulinic acid dehydratase KY499_16585 PF00296 Luciferase-like monooxygenase KY499_16590 PF00202 Aminotransferase class-III KY499_16595 PF00005 ABC transporter KY499_16600 PF00528 Binding-protein-dependent transport system inner membrane component KY499_16605 PF00497 Bacterial extracellular solute-binding proteins, family 3 KY499_16635 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain KY499_16635 PF09297 NADH pyrophosphatase zinc ribbon domain KY499_16635 PF00293 NUDIX domain KY499_16655 PF05362 Lon protease (S16) C-terminal proteolytic domain KY499_16655 PF13180 PDZ domain KY499_16680 PF04012 PspA/IM30 family KY499_16685 PF04536 TPM domain KY499_16690 PF13180 PDZ domain KY499_16695 PF01012 Electron transfer flavoprotein domain KY499_16700 PF00766 Electron transfer flavoprotein FAD-binding domain KY499_16700 PF01012 Electron transfer flavoprotein domain KY499_16705 PF02585 GlcNAc-PI de-N-acetylase KY499_16710 PF10099 Anti-sigma-K factor rskA KY499_16715 PF04542 Sigma-70 region 2 KY499_16715 PF04545 Sigma-70, region 4 KY499_16720 PF00588 SpoU rRNA Methylase family KY499_16725 PF00226 DnaJ domain KY499_16725 PF01556 DnaJ C terminal domain KY499_16745 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY499_16745 PF14759 Reductase C-terminal KY499_16765 PF00528 Binding-protein-dependent transport system inner membrane component KY499_16765 PF12911 N-terminal TM domain of oligopeptide transport permease C KY499_16770 PF00005 ABC transporter KY499_16770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KY499_16795 PF00072 Response regulator receiver domain KY499_16795 PF00486 Transcriptional regulatory protein, C terminal KY499_16800 PF00672 HAMP domain KY499_16800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_16800 PF00512 His Kinase A (phospho-acceptor) domain KY499_16805 PF10647 Lipoprotein LpqB beta-propeller domain KY499_16805 PF10646 Sporulation and spore germination KY499_16815 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KY499_16815 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KY499_16865 PF12282 Signal transduction histidine kinase KY499_16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_16865 PF07568 Histidine kinase KY499_16870 PF02467 Transcription factor WhiB KY499_16880 PF01580 FtsK/SpoIIIE family KY499_16885 PF03275 UDP-galactopyranose mutase KY499_16895 PF01061 ABC-2 type transporter KY499_16900 PF00005 ABC transporter KY499_16925 PF03466 LysR substrate binding domain KY499_16925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY499_16940 PF00483 Nucleotidyl transferase KY499_16965 PF00535 Glycosyl transferase family 2 KY499_16985 PF16363 GDP-mannose 4,6 dehydratase KY499_16990 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KY499_17010 PF01183 Glycosyl hydrolases family 25 KY499_17155 PF03462 PCRF domain KY499_17155 PF00472 RF-1 domain KY499_17160 PF00005 ABC transporter KY499_17165 PF02687 FtsX-like permease family KY499_17165 PF18075 FtsX extracellular domain KY499_17170 PF01551 Peptidase family M23 KY499_17170 PF04225 Opacity-associated protein A LysM-like domain KY499_17175 PF01668 SmpB protein KY499_17185 PF00753 Metallo-beta-lactamase superfamily KY499_17190 PF01925 Sulfite exporter TauE/SafE KY499_17195 PF11127 Protein of unknown function (DUF2892) KY499_17195 PF00581 Rhodanese-like domain KY499_17200 PF02583 Metal-sensitive transcriptional repressor KY499_17210 PF07690 Major Facilitator Superfamily KY499_17215 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KY499_17220 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KY499_17235 PF08241 Methyltransferase domain KY499_17240 PF00266 Aminotransferase class-V KY499_17245 PF00459 Inositol monophosphatase family KY499_17250 PF03193 RsgA GTPase KY499_17255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KY499_17265 PF08281 Sigma-70, region 4 KY499_17265 PF04542 Sigma-70 region 2 KY499_17295 PF00478 IMP dehydrogenase / GMP reductase domain KY499_17295 PF00571 CBS domain KY499_17300 PF03471 Transporter associated domain KY499_17300 PF01595 Cyclin M transmembrane N-terminal domain KY499_17300 PF00571 CBS domain KY499_17305 PF00571 CBS domain KY499_17305 PF01595 Cyclin M transmembrane N-terminal domain KY499_17315 PF00005 ABC transporter KY499_17320 PF00950 ABC 3 transport family KY499_17325 PF01475 Ferric uptake regulator family KY499_17335 PF00291 Pyridoxal-phosphate dependent enzyme KY499_17340 PF00581 Rhodanese-like domain KY499_17345 PF00072 Response regulator receiver domain KY499_17345 PF00196 Bacterial regulatory proteins, luxR family KY499_17350 PF07730 Histidine kinase KY499_17350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY499_17360 PF12704 MacB-like periplasmic core domain KY499_17360 PF02687 FtsX-like permease family KY499_17360 PF00005 ABC transporter KY499_17365 PF08240 Alcohol dehydrogenase GroES-like domain KY499_17365 PF00107 Zinc-binding dehydrogenase KY499_17370 PF01230 HIT domain KY499_17375 PF00271 Helicase conserved C-terminal domain KY499_17375 PF00270 DEAD/DEAH box helicase KY499_17375 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KY499_17375 PF04408 Helicase associated domain (HA2) KY499_17375 PF11898 Domain of unknown function (DUF3418) KY499_17385 PF01965 DJ-1/PfpI family KY499_17395 PF01447 Thermolysin metallopeptidase, catalytic domain KY499_17395 PF02868 Thermolysin metallopeptidase, alpha-helical domain KY499_17395 PF16485 Protealysin propeptide KY499_17420 PF00175 Oxidoreductase NAD-binding domain KY499_17420 PF00970 Oxidoreductase FAD-binding domain KY499_17420 PF00042 Globin KY499_17435 PF03485 Arginyl tRNA synthetase N terminal domain KY499_17435 PF05746 DALR anticodon binding domain KY499_17435 PF00750 tRNA synthetases class I (R) KY499_17440 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KY499_17440 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KY499_17445 PF03447 Homoserine dehydrogenase, NAD binding domain KY499_17445 PF00742 Homoserine dehydrogenase KY499_17445 PF01842 ACT domain KY499_17450 PF00291 Pyridoxal-phosphate dependent enzyme KY499_17455 PF00288 GHMP kinases N terminal domain KY499_17455 PF08544 GHMP kinases C terminal KY499_17460 PF07497 Rho termination factor, RNA-binding domain KY499_17460 PF07498 Rho termination factor, N-terminal domain KY499_17460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KY499_17465 PF00472 RF-1 domain KY499_17465 PF03462 PCRF domain KY499_17470 PF17827 PrmC N-terminal domain KY499_17470 PF13649 Methyltransferase domain KY499_17475 PF01300 Telomere recombination KY499_17480 PF03808 Glycosyl transferase WecB/TagA/CpsF family KY499_17490 PF00953 Glycosyl transferase family 4 KY499_17505 PF00119 ATP synthase A chain KY499_17510 PF00137 ATP synthase subunit C KY499_17515 PF00430 ATP synthase B/B' CF(0) KY499_17520 PF00213 ATP synthase delta (OSCP) subunit KY499_17525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KY499_17525 PF00306 ATP synthase alpha/beta chain, C terminal domain KY499_17525 PF02874 ATP synthase alpha/beta family, beta-barrel domain KY499_17530 PF00231 ATP synthase KY499_17535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KY499_17535 PF02874 ATP synthase alpha/beta family, beta-barrel domain KY499_17540 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KY499_17555 PF09924 Uncharacterised conserved protein (DUF2156) KY499_17560 PF00313 'Cold-shock' DNA-binding domain KY499_17565 PF01939 Endonuclease NucS KY499_17580 PF01594 AI-2E family transporter KY499_17595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KY499_17600 PF13732 Domain of unknown function (DUF4162) KY499_17600 PF00005 ABC transporter KY499_17610 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KY499_17620 PF04851 Type III restriction enzyme, res subunit KY499_17630 PF01546 Peptidase family M20/M25/M40 KY499_17630 PF07687 Peptidase dimerisation domain KY499_17635 PF00083 Sugar (and other) transporter KY499_17645 PF00857 Isochorismatase family KY499_17650 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KY499_17650 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KY499_17655 PF02617 ATP-dependent Clp protease adaptor protein ClpS KY499_17665 PF01177 Asp/Glu/Hydantoin racemase KY499_17670 PF12706 Beta-lactamase superfamily domain KY499_17670 PF00753 Metallo-beta-lactamase superfamily KY499_17675 PF03725 3' exoribonuclease family, domain 2 KY499_17675 PF01138 3' exoribonuclease family, domain 1 KY499_17685 PF09335 SNARE associated Golgi protein KY499_17690 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KY499_17690 PF03120 NAD-dependent DNA ligase OB-fold domain KY499_17690 PF01653 NAD-dependent DNA ligase adenylation domain KY499_17690 PF00533 BRCA1 C Terminus (BRCT) domain KY499_17690 PF12826 Helix-hairpin-helix motif KY499_17705 PF02656 Domain of unknown function (DUF202) KY499_17715 PF00149 Calcineurin-like phosphoesterase KY499_17715 PF12320 Type 5 capsule protein repressor C-terminal domain KY499_17720 PF13476 AAA domain KY499_17730 PF09339 IclR helix-turn-helix domain KY499_17730 PF01614 Bacterial transcriptional regulator KY499_17735 PF01613 Flavin reductase like domain KY499_17740 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal KY499_17740 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal KY499_17750 PF00561 alpha/beta hydrolase fold KY499_17750 PF00364 Biotin-requiring enzyme KY499_17755 PF02817 e3 binding domain KY499_17755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KY499_17755 PF00364 Biotin-requiring enzyme KY499_17760 PF02780 Transketolase, C-terminal domain KY499_17760 PF02779 Transketolase, pyrimidine binding domain KY499_17765 PF00676 Dehydrogenase E1 component KY499_17775 PF00324 Amino acid permease KY499_17795 PF00890 FAD binding domain KY499_17795 PF02910 Fumarate reductase flavoprotein C-term KY499_17805 PF00266 Aminotransferase class-V KY499_17830 PF08379 Bacterial transglutaminase-like N-terminal region KY499_17830 PF01841 Transglutaminase-like superfamily KY499_17835 PF01047 MarR family KY499_17845 PF00873 AcrB/AcrD/AcrF family KY499_17850 PF06039 Malate:quinone oxidoreductase (Mqo) KY499_17855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KY499_17860 PF02469 Fasciclin domain KY499_17870 PF00578 AhpC/TSA family KY499_17885 PF07995 Glucose / Sorbosone dehydrogenase KY499_17895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY499_17895 PF03466 LysR substrate binding domain KY499_17900 PF00920 Dehydratase family KY499_17905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KY499_17905 PF00205 Thiamine pyrophosphate enzyme, central domain KY499_17905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KY499_17910 PF10369 Small subunit of acetolactate synthase KY499_17915 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KY499_17915 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KY499_17940 PF00180 Isocitrate/isopropylmalate dehydrogenase