locus-tag class description ARUE_113p00030 PF02625 XdhC and CoxI family ARUE_113p00030 PF13478 XdhC Rossmann domain ARUE_113p00040 PF01799 [2Fe-2S] binding domain ARUE_113p00040 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_113p00060 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ARUE_113p00060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ARUE_113p00070 PF01494 FAD binding domain ARUE_113p00080 PF00561 alpha/beta hydrolase fold ARUE_113p00110 PF12804 MobA-like NTP transferase domain ARUE_113p00120 PF04055 Radical SAM superfamily ARUE_113p00120 PF06463 Molybdenum Cofactor Synthesis C ARUE_113p00130 PF02391 MoaE protein ARUE_113p00140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ARUE_113p00140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ARUE_113p00180 PF01042 Endoribonuclease L-PSP ARUE_113p00190 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_113p00220 PF13193 AMP-binding enzyme C-terminal domain ARUE_113p00220 PF00501 AMP-binding enzyme ARUE_113p00230 PF01494 FAD binding domain ARUE_113p00480 PF00717 Peptidase S24-like ARUE_113p00490 PF13438 Domain of unknown function (DUF4113) ARUE_113p00490 PF11798 IMS family HHH motif ARUE_113p00490 PF00817 impB/mucB/samB family ARUE_113p00490 PF11799 impB/mucB/samB family C-terminal domain ARUE_113p00560 PF03960 ArsC family ARUE_113p00620 PF01580 FtsK/SpoIIIE family ARUE_113p00620 PF09397 Ftsk gamma domain ARUE_113p00620 PF17854 FtsK alpha domain ARUE_113p00660 PF01551 Peptidase family M23 ARUE_113p00660 PF10145 Phage-related minor tail protein ARUE_113p00660 PF01464 Transglycosylase SLT domain ARUE_113p00790 PF13614 AAA domain ARUE_113p00830 PF00437 Type II/IV secretion system protein ARUE_232p00010 PF13614 AAA domain ARUE_232p00080 PF02796 Helix-turn-helix domain of resolvase ARUE_232p00080 PF00239 Resolvase, N terminal domain ARUE_232p00140 PF01526 Tn3 transposase DDE domain ARUE_232p00140 PF13700 Domain of unknown function (DUF4158) ARUE_232p00210 PF00239 Resolvase, N terminal domain ARUE_232p00210 PF02796 Helix-turn-helix domain of resolvase ARUE_232p00220 PF01790 Prolipoprotein diacylglyceryl transferase ARUE_232p00230 PF07690 Major Facilitator Superfamily ARUE_232p00240 PF00753 Metallo-beta-lactamase superfamily ARUE_232p00250 PF00085 Thioredoxin ARUE_232p00260 PF00581 Rhodanese-like domain ARUE_232p00280 PF01925 Sulfite exporter TauE/SafE ARUE_232p00300 PF02583 Metal-sensitive transcriptional repressor ARUE_232p00320 PF07731 Multicopper oxidase ARUE_232p00320 PF07732 Multicopper oxidase ARUE_232p00340 PF01022 Bacterial regulatory protein, arsR family ARUE_232p00350 PF00239 Resolvase, N terminal domain ARUE_232p00350 PF02796 Helix-turn-helix domain of resolvase ARUE_232p00400 PF04234 CopC domain ARUE_232p00430 PF01545 Cation efflux family ARUE_232p00440 PF01022 Bacterial regulatory protein, arsR family ARUE_232p00450 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) ARUE_232p00450 PF05425 Copper resistance protein D ARUE_232p00460 PF01022 Bacterial regulatory protein, arsR family ARUE_232p00500 PF01551 Peptidase family M23 ARUE_232p00500 PF08525 Opacity-associated protein A N-terminal motif ARUE_232p00500 PF01476 LysM domain ARUE_232p00510 PF02386 Cation transport protein ARUE_232p00540 PF02683 Cytochrome C biogenesis protein transmembrane region ARUE_232p00550 PF01252 Signal peptidase (SPase) II ARUE_232p00570 PF01022 Bacterial regulatory protein, arsR family ARUE_232p00580 PF02535 ZIP Zinc transporter ARUE_232p00590 PF07732 Multicopper oxidase ARUE_232p00600 PF02742 Iron dependent repressor, metal binding and dimerisation domain ARUE_232p00600 PF01325 Iron dependent repressor, N-terminal DNA binding domain ARUE_232p00600 PF18357 Diphteria toxin repressor SH3 domain ARUE_232p00620 PF00571 CBS domain ARUE_232p00620 PF01595 Cyclin M transmembrane N-terminal domain ARUE_232p00630 PF00571 CBS domain ARUE_232p00630 PF03471 Transporter associated domain ARUE_232p00630 PF01595 Cyclin M transmembrane N-terminal domain ARUE_232p00640 PF02796 Helix-turn-helix domain of resolvase ARUE_232p00640 PF00239 Resolvase, N terminal domain ARUE_232p00680 PF00578 AhpC/TSA family ARUE_232p00690 PF02683 Cytochrome C biogenesis protein transmembrane region ARUE_232p00720 PF01252 Signal peptidase (SPase) II ARUE_232p00800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ARUE_232p00800 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_232p00810 PF00376 MerR family regulatory protein ARUE_232p00810 PF09278 MerR, DNA binding ARUE_232p00940 PF17782 DprA winged helix domain ARUE_232p00940 PF02481 DNA recombination-mediator protein A ARUE_232p01000 PF17762 HTH domain found in ParB protein ARUE_232p01000 PF02195 ParB-like nuclease domain ARUE_232p01050 PF00436 Single-strand binding protein family ARUE_232p01080 PF00565 Staphylococcal nuclease homologue ARUE_232p01100 PF13276 HTH-like domain ARUE_232p01100 PF00665 Integrase core domain ARUE_232p01100 PF13333 Integrase core domain ARUE_232p01180 PF03781 Sulfatase-modifying factor enzyme 1 ARUE_232p01200 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_232p01210 PF00005 ABC transporter ARUE_232p01220 PF09084 NMT1/THI5 like ARUE_232p01230 PF16347 Domain of unknown function (DUF4976) ARUE_232p01230 PF00884 Sulfatase ARUE_232p01260 PF00480 ROK family ARUE_232p01270 PF00294 pfkB family carbohydrate kinase ARUE_232p01280 PF01116 Fructose-bisphosphate aldolase class-II ARUE_232p01320 PF05544 Proline racemase ARUE_232p01330 PF08453 Peptidase family M9 N-terminal ARUE_232p01330 PF01752 Collagenase ARUE_232p01340 PF00196 Bacterial regulatory proteins, luxR family ARUE_232p01390 PF00665 Integrase core domain ARUE_232p01410 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_232p01410 PF04324 BFD-like [2Fe-2S] binding domain ARUE_232p01420 PF01266 FAD dependent oxidoreductase ARUE_232p01430 PF05544 Proline racemase ARUE_232p01470 PF00392 Bacterial regulatory proteins, gntR family ARUE_232p01470 PF07729 FCD domain ARUE_232p01500 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_232p01510 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_232p01530 PF00701 Dihydrodipicolinate synthetase family ARUE_232p01540 PF02423 Ornithine cyclodeaminase/mu-crystallin family ARUE_232p01550 PF00083 Sugar (and other) transporter ARUE_232p01560 PF00171 Aldehyde dehydrogenase family ARUE_232p01570 PF00557 Metallopeptidase family M24 ARUE_232p01570 PF05195 Aminopeptidase P, N-terminal domain ARUE_232p01580 PF00561 alpha/beta hydrolase fold ARUE_232p01590 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_232p01600 PF12911 N-terminal TM domain of oligopeptide transport permease C ARUE_232p01600 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_232p01610 PF00005 ABC transporter ARUE_232p01610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_232p01620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_232p01660 PF01177 Asp/Glu/Hydantoin racemase ARUE_232p01670 PF07690 Major Facilitator Superfamily ARUE_232p01680 PF01968 Hydantoinase/oxoprolinase ARUE_232p01680 PF05378 Hydantoinase/oxoprolinase N-terminal region ARUE_232p01720 PF03814 Potassium-transporting ATPase A subunit ARUE_232p01730 PF01752 Collagenase ARUE_232p01730 PF08453 Peptidase family M9 N-terminal ARUE_232p01810 PF00589 Phage integrase family ARUE_232p01810 PF02899 Phage integrase, N-terminal SAM-like domain ARUE_232p01890 PF00271 Helicase conserved C-terminal domain ARUE_232p01890 PF00176 SNF2 family N-terminal domain ARUE_232p01890 PF04434 SWIM zinc finger ARUE_232p01900 PF00176 SNF2 family N-terminal domain ARUE_232p01900 PF00271 Helicase conserved C-terminal domain ARUE_232p01940 PF00589 Phage integrase family ARUE_232p01940 PF02899 Phage integrase, N-terminal SAM-like domain ARUE_232p02020 PF00929 Exonuclease ARUE_c00010 PF08299 Bacterial dnaA protein helix-turn-helix ARUE_c00010 PF00308 Bacterial dnaA protein ARUE_c00020 PF02768 DNA polymerase III beta subunit, C-terminal domain ARUE_c00020 PF02767 DNA polymerase III beta subunit, central domain ARUE_c00020 PF00712 DNA polymerase III beta subunit, N-terminal domain ARUE_c00030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c00030 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ARUE_c00040 PF02463 RecF/RecN/SMC N terminal domain ARUE_c00050 PF00204 DNA gyrase B ARUE_c00050 PF00986 DNA gyrase B subunit, carboxyl terminus ARUE_c00050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c00050 PF01751 Toprim domain ARUE_c00060 PF00521 DNA gyrase/topoisomerase IV, subunit A ARUE_c00060 PF03989 DNA gyrase C-terminal domain, beta-propeller ARUE_c00070 PF12089 Transmembrane domain of unknown function (DUF3566) ARUE_c00130 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ARUE_c00140 PF01694 Rhomboid family ARUE_c00170 PF03352 Methyladenine glycosylase ARUE_c00190 PF02805 Metal binding domain of Ada ARUE_c00190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ARUE_c00190 PF12833 Helix-turn-helix domain ARUE_c00190 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ARUE_c00200 PF04545 Sigma-70, region 4 ARUE_c00200 PF04542 Sigma-70 region 2 ARUE_c00210 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ARUE_c00210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ARUE_c00220 PF06781 Cell division protein CrgA ARUE_c00230 PF04203 Sortase domain ARUE_c00240 PF00117 Glutamine amidotransferase class-I ARUE_c00250 PF03793 PASTA domain ARUE_c00250 PF00069 Protein kinase domain ARUE_c00260 PF00069 Protein kinase domain ARUE_c00270 PF00905 Penicillin binding protein transpeptidase domain ARUE_c00280 PF01098 Cell cycle protein ARUE_c00300 PF16697 Inner membrane component of T3SS, cytoplasmic domain ARUE_c00310 PF00498 FHA domain ARUE_c00310 PF12401 Protein of unknown function (DUF2662) ARUE_c00330 PF07729 FCD domain ARUE_c00330 PF00392 Bacterial regulatory proteins, gntR family ARUE_c00340 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ARUE_c00340 PF13378 Enolase C-terminal domain-like ARUE_c00400 PF01593 Flavin containing amine oxidoreductase ARUE_c00410 PF00582 Universal stress protein family ARUE_c00440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c00470 PF00392 Bacterial regulatory proteins, gntR family ARUE_c00470 PF07729 FCD domain ARUE_c00480 PF03746 LamB/YcsF family ARUE_c00490 PF00083 Sugar (and other) transporter ARUE_c00490 PF07690 Major Facilitator Superfamily ARUE_c00500 PF02626 Carboxyltransferase domain, subdomain A and B ARUE_c00510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ARUE_c00510 PF02785 Biotin carboxylase C-terminal domain ARUE_c00510 PF00289 Biotin carboxylase, N-terminal domain ARUE_c00510 PF00364 Biotin-requiring enzyme ARUE_c00520 PF04030 D-arabinono-1,4-lactone oxidase ARUE_c00520 PF01565 FAD binding domain ARUE_c00530 PF00356 Bacterial regulatory proteins, lacI family ARUE_c00540 PF01758 Sodium Bile acid symporter family ARUE_c00550 PF00916 Sulfate permease family ARUE_c00550 PF01740 STAS domain ARUE_c00580 PF00294 pfkB family carbohydrate kinase ARUE_c00590 PF13409 Glutathione S-transferase, N-terminal domain ARUE_c00650 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ARUE_c00650 PF02837 Glycosyl hydrolases family 2, sugar binding domain ARUE_c00650 PF00703 Glycosyl hydrolases family 2 ARUE_c00650 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 ARUE_c00660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c00660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c00660 PF01842 ACT domain ARUE_c00670 PF02595 Glycerate kinase family ARUE_c00680 PF10944 Protein of unknown function (DUF2630) ARUE_c00760 PF01872 RibD C-terminal domain ARUE_c00790 PF01965 DJ-1/PfpI family ARUE_c00810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c00810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c00820 PF00356 Bacterial regulatory proteins, lacI family ARUE_c00840 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c00850 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c00870 PF01183 Glycosyl hydrolases family 25 ARUE_c00880 PF00860 Permease family ARUE_c00900 PF00881 Nitroreductase family ARUE_c00920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ARUE_c00920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ARUE_c00920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ARUE_c00920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ARUE_c00950 PF00854 POT family ARUE_c00960 PF01425 Amidase ARUE_c00970 PF03575 Peptidase family S51 ARUE_c00980 PF00581 Rhodanese-like domain ARUE_c00980 PF01206 Sulfurtransferase TusA ARUE_c00990 PF01842 ACT domain ARUE_c00990 PF00800 Prephenate dehydratase ARUE_c01000 PF00781 Diacylglycerol kinase catalytic domain ARUE_c01010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ARUE_c01010 PF02403 Seryl-tRNA synthetase N-terminal domain ARUE_c01070 PF04542 Sigma-70 region 2 ARUE_c01070 PF04539 Sigma-70 region 3 ARUE_c01070 PF04545 Sigma-70, region 4 ARUE_c01100 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ARUE_c01120 PF00534 Glycosyl transferases group 1 ARUE_c01120 PF13439 Glycosyltransferase Family 4 ARUE_c01130 PF13580 SIS domain ARUE_c01140 PF00294 pfkB family carbohydrate kinase ARUE_c01140 PF01467 Cytidylyltransferase-like ARUE_c01150 PF00106 short chain dehydrogenase ARUE_c01170 PF00294 pfkB family carbohydrate kinase ARUE_c01170 PF01467 Cytidylyltransferase-like ARUE_c01280 PF00719 Inorganic pyrophosphatase ARUE_c01310 PF01171 PP-loop family ARUE_c01310 PF09179 TilS substrate binding domain ARUE_c01350 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c01350 PF17862 AAA+ lid domain ARUE_c01350 PF01434 Peptidase family M41 ARUE_c01360 PF01227 GTP cyclohydrolase I ARUE_c01370 PF00809 Pterin binding enzyme ARUE_c01380 PF02152 Dihydroneopterin aldolase ARUE_c01390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ARUE_c01440 PF02569 Pantoate-beta-alanine ligase ARUE_c01450 PF07690 Major Facilitator Superfamily ARUE_c01530 PF03466 LysR substrate binding domain ARUE_c01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c01570 PF08386 TAP-like protein ARUE_c01570 PF00561 alpha/beta hydrolase fold ARUE_c01590 PF00152 tRNA synthetases class II (D, K and N) ARUE_c01590 PF01336 OB-fold nucleic acid binding domain ARUE_c01600 PF11774 Lsr2 ARUE_c01620 PF10431 C-terminal, D2-small domain, of ClpB protein ARUE_c01620 PF17871 AAA lid domain ARUE_c01620 PF02861 Clp amino terminal domain, pathogenicity island component ARUE_c01620 PF07724 AAA domain (Cdc48 subfamily) ARUE_c01620 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c01630 PF03033 Glycosyltransferase family 28 N-terminal domain ARUE_c01630 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ARUE_c01640 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ARUE_c01640 PF00326 Prolyl oligopeptidase family ARUE_c01640 PF07676 WD40-like Beta Propeller Repeat ARUE_c01650 PF00583 Acetyltransferase (GNAT) family ARUE_c01660 PF01565 FAD binding domain ARUE_c01660 PF08031 Berberine and berberine like ARUE_c01680 PF02733 Dak1 domain ARUE_c01690 PF02734 DAK2 domain ARUE_c01700 PF03610 PTS system fructose IIA component ARUE_c01710 PF05532 CsbD-like ARUE_c01770 PF00730 HhH-GPD superfamily base excision DNA repair protein ARUE_c01770 PF00633 Helix-hairpin-helix motif ARUE_c01790 PF02457 DisA bacterial checkpoint controller nucleotide-binding ARUE_c01790 PF10635 DisA bacterial checkpoint controller linker region ARUE_c01790 PF00633 Helix-hairpin-helix motif ARUE_c01800 PF01425 Amidase ARUE_c01810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ARUE_c01810 PF00289 Biotin carboxylase, N-terminal domain ARUE_c01810 PF02785 Biotin carboxylase C-terminal domain ARUE_c01820 PF09347 Domain of unknown function (DUF1989) ARUE_c01870 PF18073 Rubredoxin metal binding domain ARUE_c01890 PF12849 PBP superfamily domain ARUE_c01900 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c01910 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c01920 PF00005 ABC transporter ARUE_c01930 PF01384 Phosphate transporter family ARUE_c01980 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ARUE_c02050 PF00356 Bacterial regulatory proteins, lacI family ARUE_c02060 PF14031 Putative serine dehydratase domain ARUE_c02080 PF00547 Urease, gamma subunit ARUE_c02090 PF00699 Urease beta subunit ARUE_c02100 PF01979 Amidohydrolase family ARUE_c02100 PF00449 Urease alpha-subunit, N-terminal domain ARUE_c02110 PF02814 UreE urease accessory protein, N-terminal domain ARUE_c02110 PF05194 UreE urease accessory protein, C-terminal domain ARUE_c02120 PF01730 UreF ARUE_c02130 PF02492 CobW/HypB/UreG, nucleotide-binding domain ARUE_c02140 PF01774 UreD urease accessory protein ARUE_c02150 PF03824 High-affinity nickel-transport protein ARUE_c02210 PF00128 Alpha amylase, catalytic domain ARUE_c02210 PF03714 Bacterial pullanase-associated domain ARUE_c02210 PF02806 Alpha amylase, C-terminal all-beta domain ARUE_c02250 PF00248 Aldo/keto reductase family ARUE_c02270 PF00248 Aldo/keto reductase family ARUE_c02280 PF00248 Aldo/keto reductase family ARUE_c02300 PF07311 Dodecin ARUE_c02340 PF01095 Pectinesterase ARUE_c02350 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c02360 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c02390 PF04616 Glycosyl hydrolases family 43 ARUE_c02390 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ARUE_c02400 PF00356 Bacterial regulatory proteins, lacI family ARUE_c02410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c02410 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c02410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c02420 PF04199 Putative cyclase ARUE_c02430 PF01593 Flavin containing amine oxidoreductase ARUE_c02440 PF01613 Flavin reductase like domain ARUE_c02500 PF00392 Bacterial regulatory proteins, gntR family ARUE_c02500 PF07729 FCD domain ARUE_c02510 PF08386 TAP-like protein ARUE_c02510 PF00561 alpha/beta hydrolase fold ARUE_c02530 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ARUE_c02530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c02540 PF02447 GntP family permease ARUE_c02550 PF01116 Fructose-bisphosphate aldolase class-II ARUE_c02640 PF00282 Pyridoxal-dependent decarboxylase conserved domain ARUE_c02650 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ARUE_c02670 PF06276 Ferric iron reductase FhuF-like transporter ARUE_c02670 PF04183 IucA / IucC family ARUE_c02730 PF00583 Acetyltransferase (GNAT) family ARUE_c02760 PF00892 EamA-like transporter family ARUE_c02770 PF00155 Aminotransferase class I and II ARUE_c02770 PF00392 Bacterial regulatory proteins, gntR family ARUE_c02780 PF00083 Sugar (and other) transporter ARUE_c02790 PF13649 Methyltransferase domain ARUE_c02790 PF17827 PrmC N-terminal domain ARUE_c02810 PF13298 DNA polymerase Ligase (LigD) ARUE_c02810 PF01068 ATP dependent DNA ligase domain ARUE_c02810 PF04679 ATP dependent DNA ligase C terminal region ARUE_c02820 PF02735 Ku70/Ku80 beta-barrel domain ARUE_c02870 PF00210 Ferritin-like domain ARUE_c02920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ARUE_c02920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ARUE_c02930 PF00294 pfkB family carbohydrate kinase ARUE_c02940 PF08220 DeoR-like helix-turn-helix domain ARUE_c02940 PF00455 DeoR C terminal sensor domain ARUE_c02980 PF04107 Glutamate-cysteine ligase family 2(GCS2) ARUE_c03020 PF00356 Bacterial regulatory proteins, lacI family ARUE_c03030 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c03040 PF03633 Glycosyl hydrolase family 65, C-terminal domain ARUE_c03040 PF03632 Glycosyl hydrolase family 65 central catalytic domain ARUE_c03040 PF03636 Glycosyl hydrolase family 65, N-terminal domain ARUE_c03060 PF07690 Major Facilitator Superfamily ARUE_c03080 PF08241 Methyltransferase domain ARUE_c03090 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ARUE_c03090 PF01409 tRNA synthetases class II core domain (F) ARUE_c03130 PF01047 MarR family ARUE_c03160 PF01593 Flavin containing amine oxidoreductase ARUE_c03180 PF00348 Polyprenyl synthetase ARUE_c03190 PF00293 NUDIX domain ARUE_c03290 PF00920 Dehydratase family ARUE_c03300 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c03300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c03300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c03330 PF04960 Glutaminase ARUE_c03370 PF03746 LamB/YcsF family ARUE_c03410 PF04286 Protein of unknown function (DUF445) ARUE_c03420 PF03009 Glycerophosphoryl diester phosphodiesterase family ARUE_c03470 PF01910 Thiamine-binding protein ARUE_c03480 PF01596 O-methyltransferase ARUE_c03540 PF00005 ABC transporter ARUE_c03540 PF00664 ABC transporter transmembrane region ARUE_c03550 PF00005 ABC transporter ARUE_c03550 PF00664 ABC transporter transmembrane region ARUE_c03590 PF01032 FecCD transport family ARUE_c03600 PF01032 FecCD transport family ARUE_c03610 PF00005 ABC transporter ARUE_c03620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c03620 PF03466 LysR substrate binding domain ARUE_c03630 PF00083 Sugar (and other) transporter ARUE_c03660 PF00324 Amino acid permease ARUE_c03710 PF01175 Urocanase Rossmann-like domain ARUE_c03710 PF17391 Urocanase N-terminal domain ARUE_c03710 PF17392 Urocanase C-terminal domain ARUE_c03720 PF00221 Aromatic amino acid lyase ARUE_c03750 PF05088 Bacterial NAD-glutamate dehydrogenase ARUE_c03790 PF00860 Permease family ARUE_c03830 PF00582 Universal stress protein family ARUE_c03840 PF00391 PEP-utilising enzyme, mobile domain ARUE_c03840 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ARUE_c03850 PF01545 Cation efflux family ARUE_c03850 PF16916 Dimerisation domain of Zinc Transporter ARUE_c03870 PF00294 pfkB family carbohydrate kinase ARUE_c03980 PF02583 Metal-sensitive transcriptional repressor ARUE_c04000 PF01925 Sulfite exporter TauE/SafE ARUE_c04020 PF00581 Rhodanese-like domain ARUE_c04030 PF00085 Thioredoxin ARUE_c04050 PF00753 Metallo-beta-lactamase superfamily ARUE_c04060 PF07690 Major Facilitator Superfamily ARUE_c04090 PF01380 SIS domain ARUE_c04100 PF00294 pfkB family carbohydrate kinase ARUE_c04130 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c04140 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c04240 PF08281 Sigma-70, region 4 ARUE_c04240 PF04542 Sigma-70 region 2 ARUE_c04280 PF01547 Bacterial extracellular solute-binding protein ARUE_c04290 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c04300 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c04310 PF00356 Bacterial regulatory proteins, lacI family ARUE_c04350 PF00196 Bacterial regulatory proteins, luxR family ARUE_c04350 PF00072 Response regulator receiver domain ARUE_c04360 PF07730 Histidine kinase ARUE_c04390 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ARUE_c04390 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ARUE_c04400 PF01144 Coenzyme A transferase ARUE_c04410 PF01144 Coenzyme A transferase ARUE_c04440 PF02469 Fasciclin domain ARUE_c04460 PF02028 BCCT, betaine/carnitine/choline family transporter ARUE_c04470 PF09339 IclR helix-turn-helix domain ARUE_c04470 PF01614 Bacterial transcriptional regulator ARUE_c04490 PF00107 Zinc-binding dehydrogenase ARUE_c04490 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c04500 PF01568 Molydopterin dinucleotide binding domain ARUE_c04500 PF00384 Molybdopterin oxidoreductase ARUE_c04510 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ARUE_c04510 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ARUE_c04520 PF04961 Formiminotransferase-cyclodeaminase ARUE_c04530 PF01571 Aminomethyltransferase folate-binding domain ARUE_c04530 PF16350 FAD dependent oxidoreductase central domain ARUE_c04530 PF01266 FAD dependent oxidoreductase ARUE_c04530 PF08669 Glycine cleavage T-protein C-terminal barrel domain ARUE_c04540 PF00551 Formyl transferase ARUE_c04550 PF07729 FCD domain ARUE_c04550 PF00392 Bacterial regulatory proteins, gntR family ARUE_c04560 PF01680 SOR/SNZ family ARUE_c04580 PF00083 Sugar (and other) transporter ARUE_c04590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c04590 PF03466 LysR substrate binding domain ARUE_c04600 PF00355 Rieske [2Fe-2S] domain ARUE_c04600 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ARUE_c04610 PF00970 Oxidoreductase FAD-binding domain ARUE_c04610 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_c04610 PF00175 Oxidoreductase NAD-binding domain ARUE_c04620 PF00196 Bacterial regulatory proteins, luxR family ARUE_c04630 PF01380 SIS domain ARUE_c04640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ARUE_c04670 PF03441 FAD binding domain of DNA photolyase ARUE_c04670 PF00875 DNA photolyase ARUE_c04690 PF00171 Aldehyde dehydrogenase family ARUE_c04700 PF00378 Enoyl-CoA hydratase/isomerase ARUE_c04710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c04710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ARUE_c04720 PF00378 Enoyl-CoA hydratase/isomerase ARUE_c04770 PF00582 Universal stress protein family ARUE_c04800 PF13193 AMP-binding enzyme C-terminal domain ARUE_c04800 PF00501 AMP-binding enzyme ARUE_c04810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c04810 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c04810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c04830 PF00732 GMC oxidoreductase ARUE_c04830 PF05199 GMC oxidoreductase ARUE_c04880 PF00376 MerR family regulatory protein ARUE_c04880 PF09278 MerR, DNA binding ARUE_c04900 PF02540 NAD synthase ARUE_c04910 PF00356 Bacterial regulatory proteins, lacI family ARUE_c04940 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c04960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c04960 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c04980 PF02614 Glucuronate isomerase ARUE_c04990 PF01232 Mannitol dehydrogenase Rossmann domain ARUE_c04990 PF08125 Mannitol dehydrogenase C-terminal domain ARUE_c05000 PF13378 Enolase C-terminal domain-like ARUE_c05000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ARUE_c05020 PF13407 Periplasmic binding protein domain ARUE_c05030 PF00005 ABC transporter ARUE_c05040 PF02653 Branched-chain amino acid transport system / permease component ARUE_c05050 PF00356 Bacterial regulatory proteins, lacI family ARUE_c05060 PF00156 Phosphoribosyl transferase domain ARUE_c05080 PF00005 ABC transporter ARUE_c05080 PF13732 Domain of unknown function (DUF4162) ARUE_c05130 PF04127 DNA / pantothenate metabolism flavoprotein ARUE_c05130 PF02441 Flavoprotein ARUE_c05170 PF00196 Bacterial regulatory proteins, luxR family ARUE_c05170 PF00072 Response regulator receiver domain ARUE_c05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c05180 PF07730 Histidine kinase ARUE_c05180 PF00672 HAMP domain ARUE_c05200 PF13344 Haloacid dehalogenase-like hydrolase ARUE_c05240 PF01116 Fructose-bisphosphate aldolase class-II ARUE_c05260 PF00005 ABC transporter ARUE_c05270 PF01032 FecCD transport family ARUE_c05280 PF01032 FecCD transport family ARUE_c05290 PF01497 Periplasmic binding protein ARUE_c05310 PF00709 Adenylosuccinate synthetase ARUE_c05330 PF00440 Bacterial regulatory proteins, tetR family ARUE_c05330 PF02909 Tetracyclin repressor-like, C-terminal domain ARUE_c05340 PF07690 Major Facilitator Superfamily ARUE_c05370 PF02910 Fumarate reductase flavoprotein C-term ARUE_c05370 PF00890 FAD binding domain ARUE_c05380 PF03466 LysR substrate binding domain ARUE_c05380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c05390 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ARUE_c05390 PF00056 lactate/malate dehydrogenase, NAD binding domain ARUE_c05410 PF10415 Fumarase C C-terminus ARUE_c05410 PF00206 Lyase ARUE_c05450 PF03466 LysR substrate binding domain ARUE_c05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c05460 PF08946 Osmosensory transporter coiled coil ARUE_c05460 PF00083 Sugar (and other) transporter ARUE_c05480 PF02728 Copper amine oxidase, N3 domain ARUE_c05480 PF01179 Copper amine oxidase, enzyme domain ARUE_c05500 PF00171 Aldehyde dehydrogenase family ARUE_c05520 PF07690 Major Facilitator Superfamily ARUE_c05520 PF00083 Sugar (and other) transporter ARUE_c05530 PF00561 alpha/beta hydrolase fold ARUE_c05550 PF03471 Transporter associated domain ARUE_c05550 PF00999 Sodium/hydrogen exchanger family ARUE_c05550 PF02080 TrkA-C domain ARUE_c05560 PF02368 Bacterial Ig-like domain (group 2) ARUE_c05560 PF11999 Protein of unknown function (DUF3494) ARUE_c05610 PF00356 Bacterial regulatory proteins, lacI family ARUE_c05620 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c05630 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c05640 PF00005 ABC transporter ARUE_c05650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c05650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c05660 PF01266 FAD dependent oxidoreductase ARUE_c05690 PF01594 AI-2E family transporter ARUE_c05760 PF13380 CoA binding domain ARUE_c05780 PF04237 YjbR ARUE_c05810 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c05820 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c05840 PF01613 Flavin reductase like domain ARUE_c05860 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ARUE_c05860 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ARUE_c05890 PF00083 Sugar (and other) transporter ARUE_c05900 PF07729 FCD domain ARUE_c05900 PF00392 Bacterial regulatory proteins, gntR family ARUE_c05920 PF00155 Aminotransferase class I and II ARUE_c05930 PF00990 Diguanylate cyclase, GGDEF domain ARUE_c05930 PF05230 MASE2 domain ARUE_c05950 PF03707 Bacterial signalling protein N terminal repeat ARUE_c05950 PF00990 Diguanylate cyclase, GGDEF domain ARUE_c05950 PF00563 EAL domain ARUE_c05960 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ARUE_c05960 PF02769 AIR synthase related protein, C-terminal domain ARUE_c05960 PF00586 AIR synthase related protein, N-terminal domain ARUE_c06000 PF05067 Manganese containing catalase ARUE_c06010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c06010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c06020 PF13088 BNR repeat-like domain ARUE_c06020 PF00754 F5/8 type C domain ARUE_c06020 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase ARUE_c06030 PF06280 Fn3-like domain ARUE_c06030 PF02225 PA domain ARUE_c06030 PF00082 Subtilase family ARUE_c06030 PF00746 LPXTG cell wall anchor motif ARUE_c06060 PF01047 MarR family ARUE_c06090 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c06100 PF00005 ABC transporter ARUE_c06100 PF00571 CBS domain ARUE_c06110 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c06120 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ARUE_c06140 PF13378 Enolase C-terminal domain-like ARUE_c06140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ARUE_c06150 PF00171 Aldehyde dehydrogenase family ARUE_c06160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c06160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ARUE_c06170 PF00465 Iron-containing alcohol dehydrogenase ARUE_c06180 PF00171 Aldehyde dehydrogenase family ARUE_c06190 PF00106 short chain dehydrogenase ARUE_c06220 PF14310 Fibronectin type III-like domain ARUE_c06220 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c06220 PF01915 Glycosyl hydrolase family 3 C-terminal domain ARUE_c06220 PF07691 PA14 domain ARUE_c06230 PF00083 Sugar (and other) transporter ARUE_c06250 PF01842 ACT domain ARUE_c06250 PF13840 ACT domain ARUE_c06250 PF00696 Amino acid kinase family ARUE_c06290 PF02132 RecR protein ARUE_c06290 PF13662 Toprim domain ARUE_c06300 PF12169 DNA polymerase III subunits gamma and tau domain III ARUE_c06310 PF01784 NIF3 (NGG1p interacting factor 3) ARUE_c06350 PF00171 Aldehyde dehydrogenase family ARUE_c06370 PF07690 Major Facilitator Superfamily ARUE_c06380 PF01047 MarR family ARUE_c06390 PF01464 Transglycosylase SLT domain ARUE_c06390 PF01551 Peptidase family M23 ARUE_c06390 PF10145 Phage-related minor tail protein ARUE_c06400 PF00255 Glutathione peroxidase ARUE_c06410 PF00149 Calcineurin-like phosphoesterase ARUE_c06420 PF11380 Stealth protein CR2, conserved region 2 ARUE_c06420 PF17101 Stealth protein CR1, conserved region 1 ARUE_c06420 PF17102 Stealth protein CR3, conserved region 3 ARUE_c06420 PF17103 Stealth protein CR4, conserved region 4 ARUE_c06470 PF13977 BetI-type transcriptional repressor, C-terminal ARUE_c06470 PF00440 Bacterial regulatory proteins, tetR family ARUE_c06510 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c06520 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ARUE_c06540 PF13439 Glycosyltransferase Family 4 ARUE_c06570 PF08244 Glycosyl hydrolases family 32 C terminal ARUE_c06570 PF00251 Glycosyl hydrolases family 32 N-terminal domain ARUE_c06580 PF00294 pfkB family carbohydrate kinase ARUE_c06590 PF00356 Bacterial regulatory proteins, lacI family ARUE_c06600 PF18835 Beta helix repeat of Inulin fructotransferase ARUE_c06600 PF05048 Periplasmic copper-binding protein (NosD) ARUE_c06610 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c06620 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c06630 PF01547 Bacterial extracellular solute-binding protein ARUE_c06640 PF18835 Beta helix repeat of Inulin fructotransferase ARUE_c06640 PF05048 Periplasmic copper-binding protein (NosD) ARUE_c06650 PF00582 Universal stress protein family ARUE_c06660 PF01970 Tripartite tricarboxylate transporter TctA family ARUE_c06690 PF17203 Single cache domain 3 ARUE_c06690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c06690 PF00989 PAS fold ARUE_c06690 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ARUE_c06700 PF00072 Response regulator receiver domain ARUE_c06700 PF08279 HTH domain ARUE_c06740 PF03928 Haem-degrading ARUE_c06750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c06750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c06760 PF07676 WD40-like Beta Propeller Repeat ARUE_c06780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c06790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c06790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c06810 PF01047 MarR family ARUE_c06810 PF00480 ROK family ARUE_c06840 PF00463 Isocitrate lyase family ARUE_c06870 PF00440 Bacterial regulatory proteins, tetR family ARUE_c06890 PF08543 Phosphomethylpyrimidine kinase ARUE_c06910 PF08521 Two-component sensor kinase N-terminal ARUE_c06910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c06910 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c06920 PF00486 Transcriptional regulatory protein, C terminal ARUE_c06920 PF00072 Response regulator receiver domain ARUE_c06930 PF00083 Sugar (and other) transporter ARUE_c06950 PF01370 NAD dependent epimerase/dehydratase family ARUE_c06950 PF08338 Domain of unknown function (DUF1731) ARUE_c06960 PF17932 Tetracyclin repressor-like, C-terminal domain ARUE_c06960 PF00440 Bacterial regulatory proteins, tetR family ARUE_c06980 PF01702 Queuine tRNA-ribosyltransferase ARUE_c07040 PF00005 ABC transporter ARUE_c07040 PF08402 TOBE domain ARUE_c07050 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c07080 PF00106 short chain dehydrogenase ARUE_c07130 PF02585 GlcNAc-PI de-N-acetylase ARUE_c07150 PF00535 Glycosyl transferase family 2 ARUE_c07170 PF00311 Phosphoenolpyruvate carboxylase ARUE_c07190 PF09335 SNARE associated Golgi protein ARUE_c07200 PF01661 Macro domain ARUE_c07220 PF00849 RNA pseudouridylate synthase ARUE_c07270 PF00155 Aminotransferase class I and II ARUE_c07270 PF00392 Bacterial regulatory proteins, gntR family ARUE_c07290 PF11606 Family 31 carbohydrate binding protein ARUE_c07310 PF00535 Glycosyl transferase family 2 ARUE_c07310 PF03552 Cellulose synthase ARUE_c07310 PF07238 PilZ domain ARUE_c07320 PF00722 Glycosyl hydrolases family 16 ARUE_c07330 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ARUE_c07330 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ARUE_c07340 PF00270 DEAD/DEAH box helicase ARUE_c07340 PF00271 Helicase conserved C-terminal domain ARUE_c07340 PF08494 DEAD/H associated ARUE_c07400 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c07400 PF00107 Zinc-binding dehydrogenase ARUE_c07420 PF00534 Glycosyl transferases group 1 ARUE_c07420 PF13439 Glycosyltransferase Family 4 ARUE_c07450 PF14437 MafB19-like deaminase ARUE_c07490 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c07530 PF00672 HAMP domain ARUE_c07530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c07530 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c07540 PF00072 Response regulator receiver domain ARUE_c07540 PF00486 Transcriptional regulatory protein, C terminal ARUE_c07550 PF00072 Response regulator receiver domain ARUE_c07550 PF00486 Transcriptional regulatory protein, C terminal ARUE_c07580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c07580 PF03466 LysR substrate binding domain ARUE_c07590 PF00892 EamA-like transporter family ARUE_c07600 PF00171 Aldehyde dehydrogenase family ARUE_c07620 PF07969 Amidohydrolase family ARUE_c07630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c07640 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c07650 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c07650 PF12911 N-terminal TM domain of oligopeptide transport permease C ARUE_c07660 PF00005 ABC transporter ARUE_c07660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c07670 PF01266 FAD dependent oxidoreductase ARUE_c07690 PF08361 MAATS-type transcriptional repressor, C-terminal region ARUE_c07690 PF00440 Bacterial regulatory proteins, tetR family ARUE_c07720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ARUE_c07720 PF00403 Heavy-metal-associated domain ARUE_c07720 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c07730 PF00581 Rhodanese-like domain ARUE_c07740 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ARUE_c07750 PF00480 ROK family ARUE_c07760 PF00701 Dihydrodipicolinate synthetase family ARUE_c07770 PF00005 ABC transporter ARUE_c07770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c07780 PF00005 ABC transporter ARUE_c07780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c07790 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c07800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c07810 PF00392 Bacterial regulatory proteins, gntR family ARUE_c07810 PF07729 FCD domain ARUE_c07830 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ARUE_c07830 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ARUE_c07840 PF00042 Globin ARUE_c07840 PF00970 Oxidoreductase FAD-binding domain ARUE_c07840 PF00175 Oxidoreductase NAD-binding domain ARUE_c07870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ARUE_c07870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ARUE_c07870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ARUE_c07870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ARUE_c07880 PF00271 Helicase conserved C-terminal domain ARUE_c07880 PF16124 RecQ zinc-binding ARUE_c07880 PF09382 RQC domain ARUE_c07880 PF00270 DEAD/DEAH box helicase ARUE_c07880 PF00570 HRDC domain ARUE_c07890 PF07690 Major Facilitator Superfamily ARUE_c07910 PF00326 Prolyl oligopeptidase family ARUE_c07910 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ARUE_c07930 PF00324 Amino acid permease ARUE_c07940 PF00149 Calcineurin-like phosphoesterase ARUE_c07950 PF18029 Glyoxalase-like domain ARUE_c07950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c07970 PF00109 Beta-ketoacyl synthase, N-terminal domain ARUE_c07970 PF02801 Beta-ketoacyl synthase, C-terminal domain ARUE_c07970 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c07970 PF08659 KR domain ARUE_c07970 PF00550 Phosphopantetheine attachment site ARUE_c07970 PF14765 Polyketide synthase dehydratase ARUE_c07970 PF00698 Acyl transferase domain ARUE_c07970 PF16197 Ketoacyl-synthetase C-terminal extension ARUE_c07990 PF13722 5TM C-terminal transporter carbon starvation CstA ARUE_c07990 PF02554 Carbon starvation protein CstA ARUE_c08010 PF10759 Protein of unknown function (DUF2587) ARUE_c08030 PF00248 Aldo/keto reductase family ARUE_c08050 PF01425 Amidase ARUE_c08080 PF07687 Peptidase dimerisation domain ARUE_c08080 PF01546 Peptidase family M20/M25/M40 ARUE_c08110 PF00171 Aldehyde dehydrogenase family ARUE_c08130 PF00456 Transketolase, thiamine diphosphate binding domain ARUE_c08140 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ARUE_c08140 PF02779 Transketolase, pyrimidine binding domain ARUE_c08140 PF02780 Transketolase, C-terminal domain ARUE_c08150 PF00294 pfkB family carbohydrate kinase ARUE_c08170 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ARUE_c08220 PF03466 LysR substrate binding domain ARUE_c08220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c08260 PF13407 Periplasmic binding protein domain ARUE_c08270 PF00005 ABC transporter ARUE_c08280 PF02653 Branched-chain amino acid transport system / permease component ARUE_c08300 PF00106 short chain dehydrogenase ARUE_c08310 PF00296 Luciferase-like monooxygenase ARUE_c08320 PF07690 Major Facilitator Superfamily ARUE_c08360 PF03466 LysR substrate binding domain ARUE_c08360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c08390 PF00561 alpha/beta hydrolase fold ARUE_c08400 PF12169 DNA polymerase III subunits gamma and tau domain III ARUE_c08410 PF02223 Thymidylate kinase ARUE_c08420 PF01053 Cys/Met metabolism PLP-dependent enzyme ARUE_c08450 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c08460 PF01895 PhoU domain ARUE_c08470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c08470 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c08480 PF00486 Transcriptional regulatory protein, C terminal ARUE_c08480 PF00072 Response regulator receiver domain ARUE_c08500 PF02559 CarD-like/TRCF domain ARUE_c08510 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ARUE_c08520 PF02542 YgbB family ARUE_c08540 PF09190 DALR domain ARUE_c08540 PF01406 tRNA synthetases class I (C) catalytic domain ARUE_c08550 PF08032 RNA 2'-O ribose methyltransferase substrate binding ARUE_c08550 PF00588 SpoU rRNA Methylase family ARUE_c08560 PF00795 Carbon-nitrogen hydrolase ARUE_c08570 PF00128 Alpha amylase, catalytic domain ARUE_c08570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ARUE_c08600 PF00343 Carbohydrate phosphorylase ARUE_c08600 PF11897 Protein of unknown function (DUF3417) ARUE_c08610 PF11896 Domain of unknown function (DUF3416) ARUE_c08620 PF00128 Alpha amylase, catalytic domain ARUE_c08620 PF16657 Maltogenic Amylase, C-terminal domain ARUE_c08630 PF02806 Alpha amylase, C-terminal all-beta domain ARUE_c08630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ARUE_c08630 PF00128 Alpha amylase, catalytic domain ARUE_c08700 PF00128 Alpha amylase, catalytic domain ARUE_c08720 PF14785 Maltose transport system permease protein MalF P2 domain ARUE_c08720 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c08730 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c08740 PF02903 Alpha amylase, N-terminal ig-like domain ARUE_c08740 PF00128 Alpha amylase, catalytic domain ARUE_c08750 PF02913 FAD linked oxidases, C-terminal domain ARUE_c08750 PF01565 FAD binding domain ARUE_c08780 PF07969 Amidohydrolase family ARUE_c08810 PF00728 Glycosyl hydrolase family 20, catalytic domain ARUE_c08810 PF02838 Glycosyl hydrolase family 20, domain 2 ARUE_c08820 PF17912 MalK OB fold domain ARUE_c08820 PF00005 ABC transporter ARUE_c08830 PF03633 Glycosyl hydrolase family 65, C-terminal domain ARUE_c08830 PF03636 Glycosyl hydrolase family 65, N-terminal domain ARUE_c08830 PF02358 Trehalose-phosphatase ARUE_c08830 PF03632 Glycosyl hydrolase family 65 central catalytic domain ARUE_c08840 PF00982 Glycosyltransferase family 20 ARUE_c08930 PF09335 SNARE associated Golgi protein ARUE_c08950 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c08960 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c08970 PF01547 Bacterial extracellular solute-binding protein ARUE_c08990 PF00251 Glycosyl hydrolases family 32 N-terminal domain ARUE_c08990 PF08244 Glycosyl hydrolases family 32 C terminal ARUE_c09010 PF00271 Helicase conserved C-terminal domain ARUE_c09010 PF00570 HRDC domain ARUE_c09010 PF09382 RQC domain ARUE_c09010 PF00270 DEAD/DEAH box helicase ARUE_c09010 PF16124 RecQ zinc-binding ARUE_c09020 PF01256 Carbohydrate kinase ARUE_c09030 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c09040 PF01593 Flavin containing amine oxidoreductase ARUE_c09150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c09150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c09150 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c09170 PF00083 Sugar (and other) transporter ARUE_c09180 PF13193 AMP-binding enzyme C-terminal domain ARUE_c09180 PF00501 AMP-binding enzyme ARUE_c09200 PF01266 FAD dependent oxidoreductase ARUE_c09260 PF04371 Porphyromonas-type peptidyl-arginine deiminase ARUE_c09280 PF00557 Metallopeptidase family M24 ARUE_c09310 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c09330 PF07687 Peptidase dimerisation domain ARUE_c09330 PF01546 Peptidase family M20/M25/M40 ARUE_c09360 PF07690 Major Facilitator Superfamily ARUE_c09370 PF00440 Bacterial regulatory proteins, tetR family ARUE_c09380 PF02347 Glycine cleavage system P-protein ARUE_c09390 PF01571 Aminomethyltransferase folate-binding domain ARUE_c09390 PF08669 Glycine cleavage T-protein C-terminal barrel domain ARUE_c09400 PF01597 Glycine cleavage H-protein ARUE_c09420 PF03315 Serine dehydratase beta chain ARUE_c09420 PF03313 Serine dehydratase alpha chain ARUE_c09430 PF01223 DNA/RNA non-specific endonuclease ARUE_c09470 PF04954 Siderophore-interacting protein ARUE_c09470 PF08021 Siderophore-interacting FAD-binding domain ARUE_c09480 PF03167 Uracil DNA glycosylase superfamily ARUE_c09510 PF00313 'Cold-shock' DNA-binding domain ARUE_c09520 PF00118 TCP-1/cpn60 chaperonin family ARUE_c09530 PF00075 RNase H ARUE_c09550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c09550 PF00672 HAMP domain ARUE_c09550 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c09560 PF00486 Transcriptional regulatory protein, C terminal ARUE_c09560 PF00072 Response regulator receiver domain ARUE_c09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c09580 PF03466 LysR substrate binding domain ARUE_c09600 PF07731 Multicopper oxidase ARUE_c09600 PF00394 Multicopper oxidase ARUE_c09600 PF07732 Multicopper oxidase ARUE_c09670 PF05977 Transmembrane secretion effector ARUE_c09680 PF00266 Aminotransferase class-V ARUE_c09700 PF18357 Diphteria toxin repressor SH3 domain ARUE_c09700 PF02742 Iron dependent repressor, metal binding and dimerisation domain ARUE_c09700 PF01325 Iron dependent repressor, N-terminal DNA binding domain ARUE_c09710 PF04225 Opacity-associated protein A LysM-like domain ARUE_c09710 PF01551 Peptidase family M23 ARUE_c09750 PF12804 MobA-like NTP transferase domain ARUE_c09770 PF00384 Molybdopterin oxidoreductase ARUE_c09770 PF01568 Molydopterin dinucleotide binding domain ARUE_c09780 PF02634 FdhD/NarQ family ARUE_c09820 PF00005 ABC transporter ARUE_c09830 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c09840 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c09870 PF12848 ABC transporter ARUE_c09870 PF16326 ABC transporter C-terminal domain ARUE_c09870 PF00005 ABC transporter ARUE_c09880 PF00664 ABC transporter transmembrane region ARUE_c09880 PF00005 ABC transporter ARUE_c09890 PF00293 NUDIX domain ARUE_c09940 PF00459 Inositol monophosphatase family ARUE_c09950 PF00580 UvrD/REP helicase N-terminal domain ARUE_c09950 PF13361 UvrD-like helicase C-terminal domain ARUE_c09980 PF00549 CoA-ligase ARUE_c09980 PF08442 ATP-grasp domain ARUE_c09990 PF02629 CoA binding domain ARUE_c09990 PF00549 CoA-ligase ARUE_c10010 PF07722 Peptidase C26 ARUE_c10090 PF00474 Sodium:solute symporter family ARUE_c10100 PF01381 Helix-turn-helix ARUE_c10100 PF07883 Cupin domain ARUE_c10130 PF00491 Arginase family ARUE_c10140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c10140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c10140 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c10160 PF07690 Major Facilitator Superfamily ARUE_c10170 PF00664 ABC transporter transmembrane region ARUE_c10170 PF00005 ABC transporter ARUE_c10180 PF00664 ABC transporter transmembrane region ARUE_c10180 PF00005 ABC transporter ARUE_c10240 PF12102 Domain of unknown function (DUF3578) ARUE_c10240 PF07728 AAA domain (dynein-related subfamily) ARUE_c10270 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c10270 PF00672 HAMP domain ARUE_c10270 PF13426 PAS domain ARUE_c10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c10280 PF00072 Response regulator receiver domain ARUE_c10280 PF00486 Transcriptional regulatory protein, C terminal ARUE_c10290 PF00037 4Fe-4S binding domain ARUE_c10300 PF00171 Aldehyde dehydrogenase family ARUE_c10330 PF00378 Enoyl-CoA hydratase/isomerase ARUE_c10340 PF02515 CoA-transferase family III ARUE_c10350 PF17806 Sarcosine oxidase A3 domain ARUE_c10350 PF01571 Aminomethyltransferase folate-binding domain ARUE_c10350 PF08669 Glycine cleavage T-protein C-terminal barrel domain ARUE_c10350 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c10360 PF00083 Sugar (and other) transporter ARUE_c10370 PF07883 Cupin domain ARUE_c10370 PF01381 Helix-turn-helix ARUE_c10400 PF00067 Cytochrome P450 ARUE_c10420 PF00155 Aminotransferase class I and II ARUE_c10430 PF00202 Aminotransferase class-III ARUE_c10440 PF04055 Radical SAM superfamily ARUE_c10440 PF06968 Biotin and Thiamin Synthesis associated domain ARUE_c10460 PF05532 CsbD-like ARUE_c10480 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c10480 PF13823 Alcohol dehydrogenase GroES-associated ARUE_c10480 PF00107 Zinc-binding dehydrogenase ARUE_c10510 PF13580 SIS domain ARUE_c10520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ARUE_c10550 PF02734 DAK2 domain ARUE_c10550 PF02733 Dak1 domain ARUE_c10560 PF02502 Ribose/Galactose Isomerase ARUE_c10570 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ARUE_c10570 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ARUE_c10590 PF07690 Major Facilitator Superfamily ARUE_c10600 PF00121 Triosephosphate isomerase ARUE_c10630 PF00571 CBS domain ARUE_c10650 PF00575 S1 RNA binding domain ARUE_c10650 PF09371 Tex-like protein N-terminal domain ARUE_c10650 PF17674 HHH domain ARUE_c10650 PF16921 Tex protein YqgF-like domain ARUE_c10690 PF00962 Adenosine/AMP deaminase ARUE_c10700 PF02903 Alpha amylase, N-terminal ig-like domain ARUE_c10700 PF00128 Alpha amylase, catalytic domain ARUE_c10710 PF00708 Acylphosphatase ARUE_c10720 PF00440 Bacterial regulatory proteins, tetR family ARUE_c10740 PF00294 pfkB family carbohydrate kinase ARUE_c10750 PF00392 Bacterial regulatory proteins, gntR family ARUE_c10750 PF07729 FCD domain ARUE_c10760 PF07690 Major Facilitator Superfamily ARUE_c10770 PF01156 Inosine-uridine preferring nucleoside hydrolase ARUE_c10790 PF08533 Beta-galactosidase C-terminal domain ARUE_c10790 PF08532 Beta-galactosidase trimerisation domain ARUE_c10790 PF02449 Beta-galactosidase ARUE_c10800 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c10810 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c10840 PF01979 Amidohydrolase family ARUE_c10900 PF14310 Fibronectin type III-like domain ARUE_c10900 PF01915 Glycosyl hydrolase family 3 C-terminal domain ARUE_c10900 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c10910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c10910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c10940 PF00356 Bacterial regulatory proteins, lacI family ARUE_c10970 PF07690 Major Facilitator Superfamily ARUE_c10980 PF12852 Cupin ARUE_c10980 PF12833 Helix-turn-helix domain ARUE_c10990 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c10990 PF00107 Zinc-binding dehydrogenase ARUE_c11010 PF00440 Bacterial regulatory proteins, tetR family ARUE_c11010 PF16295 Tetracyclin repressor-like, C-terminal domain ARUE_c11020 PF03741 Integral membrane protein TerC family ARUE_c11050 PF00324 Amino acid permease ARUE_c11060 PF00106 short chain dehydrogenase ARUE_c11070 PF00449 Urease alpha-subunit, N-terminal domain ARUE_c11070 PF01979 Amidohydrolase family ARUE_c11090 PF00313 'Cold-shock' DNA-binding domain ARUE_c11140 PF13520 Amino acid permease ARUE_c11170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ARUE_c11170 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ARUE_c11170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ARUE_c11180 PF00534 Glycosyl transferases group 1 ARUE_c11180 PF13439 Glycosyltransferase Family 4 ARUE_c11210 PF13411 MerR HTH family regulatory protein ARUE_c11220 PF00011 Hsp20/alpha crystallin family ARUE_c11270 PF00551 Formyl transferase ARUE_c11280 PF00083 Sugar (and other) transporter ARUE_c11290 PF01380 SIS domain ARUE_c11320 PF02142 MGS-like domain ARUE_c11320 PF01808 AICARFT/IMPCHase bienzyme ARUE_c11360 PF01965 DJ-1/PfpI family ARUE_c11370 PF03971 Monomeric isocitrate dehydrogenase ARUE_c11380 PF01266 FAD dependent oxidoreductase ARUE_c11390 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c11400 PF00005 ABC transporter ARUE_c11430 PF07702 UTRA domain ARUE_c11430 PF00392 Bacterial regulatory proteins, gntR family ARUE_c11440 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c11460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c11460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c11470 PF00005 ABC transporter ARUE_c11480 PF02687 FtsX-like permease family ARUE_c11480 PF12704 MacB-like periplasmic core domain ARUE_c11480 PF00005 ABC transporter ARUE_c11490 PF13407 Periplasmic binding protein domain ARUE_c11500 PF02653 Branched-chain amino acid transport system / permease component ARUE_c11510 PF00005 ABC transporter ARUE_c11520 PF01047 MarR family ARUE_c11520 PF00480 ROK family ARUE_c11530 PF00795 Carbon-nitrogen hydrolase ARUE_c11550 PF01168 Alanine racemase, N-terminal domain ARUE_c11550 PF00842 Alanine racemase, C-terminal domain ARUE_c11560 PF13520 Amino acid permease ARUE_c11570 PF02027 RolB/RolC glucosidase family ARUE_c11570 PF01593 Flavin containing amine oxidoreductase ARUE_c11600 PF00132 Bacterial transferase hexapeptide (six repeats) ARUE_c11620 PF00551 Formyl transferase ARUE_c11630 PF00464 Serine hydroxymethyltransferase ARUE_c11640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ARUE_c11640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ARUE_c11650 PF00005 ABC transporter ARUE_c11680 PF07690 Major Facilitator Superfamily ARUE_c11680 PF00083 Sugar (and other) transporter ARUE_c11700 PF00356 Bacterial regulatory proteins, lacI family ARUE_c11730 PF00579 tRNA synthetases class I (W and Y) ARUE_c11800 PF13085 2Fe-2S iron-sulfur cluster binding domain ARUE_c11810 PF00890 FAD binding domain ARUE_c11810 PF02910 Fumarate reductase flavoprotein C-term ARUE_c11830 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ARUE_c11840 PF01050 Mannose-6-phosphate isomerase ARUE_c11840 PF00483 Nucleotidyl transferase ARUE_c11850 PF04107 Glutamate-cysteine ligase family 2(GCS2) ARUE_c11850 PF01546 Peptidase family M20/M25/M40 ARUE_c11860 PF01047 MarR family ARUE_c11870 PF02566 OsmC-like protein ARUE_c11880 PF00107 Zinc-binding dehydrogenase ARUE_c11880 PF16884 N-terminal domain of oxidoreductase ARUE_c11930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ARUE_c11940 PF02885 Glycosyl transferase family, helical bundle domain ARUE_c11940 PF00591 Glycosyl transferase family, a/b domain ARUE_c11940 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ARUE_c11960 PF09335 SNARE associated Golgi protein ARUE_c11970 PF00962 Adenosine/AMP deaminase ARUE_c11980 PF03819 MazG nucleotide pyrophosphohydrolase domain ARUE_c11990 PF00113 Enolase, C-terminal TIM barrel domain ARUE_c11990 PF03952 Enolase, N-terminal domain ARUE_c12020 PF02541 Ppx/GppA phosphatase family ARUE_c12030 PF00082 Subtilase family ARUE_c12040 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c12080 PF00781 Diacylglycerol kinase catalytic domain ARUE_c12090 PF00005 ABC transporter ARUE_c12100 PF00005 ABC transporter ARUE_c12100 PF12399 Branched-chain amino acid ATP-binding cassette transporter ARUE_c12110 PF11862 Domain of unknown function (DUF3382) ARUE_c12110 PF02653 Branched-chain amino acid transport system / permease component ARUE_c12120 PF02653 Branched-chain amino acid transport system / permease component ARUE_c12140 PF00108 Thiolase, N-terminal domain ARUE_c12140 PF02803 Thiolase, C-terminal domain ARUE_c12150 PF00288 GHMP kinases N terminal domain ARUE_c12150 PF08544 GHMP kinases C terminal ARUE_c12150 PF10509 Galactokinase galactose-binding signature ARUE_c12160 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ARUE_c12160 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ARUE_c12170 PF01263 Aldose 1-epimerase ARUE_c12180 PF01594 AI-2E family transporter ARUE_c12190 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c12190 PF13291 ACT domain ARUE_c12200 PF01694 Rhomboid family ARUE_c12210 PF01272 Transcription elongation factor, GreA/GreB, C-term ARUE_c12210 PF03449 Transcription elongation factor, N-terminal ARUE_c12230 PF02585 GlcNAc-PI de-N-acetylase ARUE_c12250 PF03190 Protein of unknown function, DUF255 ARUE_c12260 PF03006 Haemolysin-III related ARUE_c12270 PF01255 Putative undecaprenyl diphosphate synthase ARUE_c12280 PF13638 PIN domain ARUE_c12280 PF02562 PhoH-like protein ARUE_c12290 PF13302 Acetyltransferase (GNAT) domain ARUE_c12340 PF07690 Major Facilitator Superfamily ARUE_c12360 PF00206 Lyase ARUE_c12360 PF10415 Fumarase C C-terminus ARUE_c12370 PF00484 Carbonic anhydrase ARUE_c12390 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ARUE_c12410 PF01238 Phosphomannose isomerase type I ARUE_c12430 PF00731 AIR carboxylase ARUE_c12440 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ARUE_c12440 PF02222 ATP-grasp domain ARUE_c12470 PF02467 Transcription factor WhiB ARUE_c12480 PF00534 Glycosyl transferases group 1 ARUE_c12480 PF00535 Glycosyl transferase family 2 ARUE_c12530 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ARUE_c12530 PF05221 S-adenosyl-L-homocysteine hydrolase ARUE_c12540 PF03734 L,D-transpeptidase catalytic domain ARUE_c12540 PF17964 Bacterial Ig domain ARUE_c12560 PF00805 Pentapeptide repeats (8 copies) ARUE_c12620 PF17418 Sporulation delaying protein SdpA ARUE_c12650 PF00501 AMP-binding enzyme ARUE_c12660 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase ARUE_c12660 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ARUE_c12670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ARUE_c12680 PF00171 Aldehyde dehydrogenase family ARUE_c12710 PF07726 ATPase family associated with various cellular activities (AAA) ARUE_c12710 PF17863 AAA lid domain ARUE_c12720 PF01026 TatD related DNase ARUE_c12730 PF07501 G5 domain ARUE_c12730 PF03990 G5-linked-Ubiquitin-like domain ARUE_c12730 PF06737 Transglycosylase-like domain ARUE_c12740 PF00398 Ribosomal RNA adenine dimethylase ARUE_c12750 PF00288 GHMP kinases N terminal domain ARUE_c12750 PF08544 GHMP kinases C terminal ARUE_c12760 PF16326 ABC transporter C-terminal domain ARUE_c12760 PF00005 ABC transporter ARUE_c12760 PF12848 ABC transporter ARUE_c12780 PF00440 Bacterial regulatory proteins, tetR family ARUE_c12800 PF00132 Bacterial transferase hexapeptide (six repeats) ARUE_c12800 PF12804 MobA-like NTP transferase domain ARUE_c12810 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ARUE_c12810 PF14572 Phosphoribosyl synthetase-associated domain ARUE_c12830 PF14693 Ribosomal protein TL5, C-terminal domain ARUE_c12830 PF01386 Ribosomal L25p family ARUE_c12840 PF01195 Peptidyl-tRNA hydrolase ARUE_c12860 PF00072 Response regulator receiver domain ARUE_c12860 PF00196 Bacterial regulatory proteins, luxR family ARUE_c12880 PF00266 Aminotransferase class-V ARUE_c12890 PF01592 NifU-like N terminal domain ARUE_c12900 PF06965 Na+/H+ antiporter 1 ARUE_c12930 PF11066 Protein of unknown function (DUF2867) ARUE_c12930 PF13460 NAD(P)H-binding ARUE_c12940 PF02559 CarD-like/TRCF domain ARUE_c12940 PF17757 UvrB interaction domain ARUE_c12940 PF03461 TRCF domain ARUE_c12940 PF00271 Helicase conserved C-terminal domain ARUE_c12940 PF00270 DEAD/DEAH box helicase ARUE_c12950 PF04307 LexA-binding, inner membrane-associated putative hydrolase ARUE_c12970 PF01791 DeoC/LacD family aldolase ARUE_c12980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ARUE_c12980 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c13020 PF06965 Na+/H+ antiporter 1 ARUE_c13020 PF13462 Thioredoxin ARUE_c13030 PF00717 Peptidase S24-like ARUE_c13040 PF00356 Bacterial regulatory proteins, lacI family ARUE_c13060 PF00083 Sugar (and other) transporter ARUE_c13100 PF13438 Domain of unknown function (DUF4113) ARUE_c13100 PF11799 impB/mucB/samB family C-terminal domain ARUE_c13100 PF11798 IMS family HHH motif ARUE_c13100 PF00817 impB/mucB/samB family ARUE_c13130 PF18267 Rubredoxin NAD+ reductase C-terminal domain ARUE_c13130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ARUE_c13130 PF04324 BFD-like [2Fe-2S] binding domain ARUE_c13130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ARUE_c13130 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c13150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ARUE_c13150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ARUE_c13150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ARUE_c13150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ARUE_c13160 PF08244 Glycosyl hydrolases family 32 C terminal ARUE_c13160 PF00251 Glycosyl hydrolases family 32 N-terminal domain ARUE_c13170 PF02435 Levansucrase/Invertase ARUE_c13180 PF01048 Phosphorylase superfamily ARUE_c13200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ARUE_c13200 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c13220 PF14759 Reductase C-terminal ARUE_c13220 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c13230 PF01568 Molydopterin dinucleotide binding domain ARUE_c13230 PF00384 Molybdopterin oxidoreductase ARUE_c13230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ARUE_c13240 PF07690 Major Facilitator Superfamily ARUE_c13250 PF00083 Sugar (and other) transporter ARUE_c13250 PF07690 Major Facilitator Superfamily ARUE_c13260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ARUE_c13260 PF00364 Biotin-requiring enzyme ARUE_c13260 PF00289 Biotin carboxylase, N-terminal domain ARUE_c13260 PF02785 Biotin carboxylase C-terminal domain ARUE_c13270 PF02545 Maf-like protein ARUE_c13280 PF03176 MMPL family ARUE_c13290 PF00440 Bacterial regulatory proteins, tetR family ARUE_c13300 PF01906 Putative heavy-metal-binding ARUE_c13340 PF01039 Carboxyl transferase domain ARUE_c13360 PF08279 HTH domain ARUE_c13360 PF03099 Biotin/lipoate A/B protein ligase family ARUE_c13360 PF02237 Biotin protein ligase C terminal domain ARUE_c13380 PF16701 Adenylate cyclase regulatory domain ARUE_c13380 PF00211 Adenylate and Guanylate cyclase catalytic domain ARUE_c13400 PF07726 ATPase family associated with various cellular activities (AAA) ARUE_c13400 PF17863 AAA lid domain ARUE_c13460 PF13191 AAA ATPase domain ARUE_c13460 PF00069 Protein kinase domain ARUE_c13480 PF12538 DNA transporter ARUE_c13480 PF01580 FtsK/SpoIIIE family ARUE_c13490 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ARUE_c13490 PF03120 NAD-dependent DNA ligase OB-fold domain ARUE_c13490 PF00533 BRCA1 C Terminus (BRCT) domain ARUE_c13490 PF01653 NAD-dependent DNA ligase adenylation domain ARUE_c13490 PF12826 Helix-hairpin-helix motif ARUE_c13500 PF00459 Inositol monophosphatase family ARUE_c13520 PF00248 Aldo/keto reductase family ARUE_c13540 PF00005 ABC transporter ARUE_c13550 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c13580 PF01042 Endoribonuclease L-PSP ARUE_c13590 PF00072 Response regulator receiver domain ARUE_c13610 PF03600 Citrate transporter ARUE_c13650 PF02686 Glu-tRNAGln amidotransferase C subunit ARUE_c13660 PF01425 Amidase ARUE_c13670 PF02934 GatB/GatE catalytic domain ARUE_c13670 PF02637 GatB domain ARUE_c13690 PF03781 Sulfatase-modifying factor enzyme 1 ARUE_c13700 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c13710 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c13730 PF00356 Bacterial regulatory proteins, lacI family ARUE_c13740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c13740 PF10518 TAT (twin-arginine translocation) pathway signal sequence ARUE_c13760 PF00107 Zinc-binding dehydrogenase ARUE_c13760 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c13770 PF00155 Aminotransferase class I and II ARUE_c13790 PF01979 Amidohydrolase family ARUE_c13800 PF17974 Galactose-binding domain-like ARUE_c13800 PF17451 Glycosyl hydrolase 101 beta sandwich domain ARUE_c13800 PF12905 Endo-alpha-N-acetylgalactosaminidase ARUE_c13800 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase ARUE_c13800 PF18080 Galactose mutarotase-like fold domain ARUE_c13800 PF08305 NPCBM/NEW2 domain ARUE_c13820 PF00480 ROK family ARUE_c13830 PF00294 pfkB family carbohydrate kinase ARUE_c13840 PF01116 Fructose-bisphosphate aldolase class-II ARUE_c13850 PF08220 DeoR-like helix-turn-helix domain ARUE_c13850 PF00455 DeoR C terminal sensor domain ARUE_c13890 PF01053 Cys/Met metabolism PLP-dependent enzyme ARUE_c13900 PF00561 alpha/beta hydrolase fold ARUE_c13970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ARUE_c13970 PF03129 Anticodon binding domain ARUE_c13990 PF08031 Berberine and berberine like ARUE_c13990 PF01565 FAD binding domain ARUE_c14010 PF01207 Dihydrouridine synthase (Dus) ARUE_c14020 PF01966 HD domain ARUE_c14020 PF13286 Phosphohydrolase-associated domain ARUE_c14030 PF13662 Toprim domain ARUE_c14030 PF08278 DNA primase DnaG DnaB-binding ARUE_c14030 PF01807 CHC2 zinc finger ARUE_c14030 PF08275 DNA primase catalytic core, N-terminal domain ARUE_c14030 PF10410 DnaB-helicase binding domain of primase ARUE_c14070 PF00756 Putative esterase ARUE_c14080 PF09924 Uncharacterised conserved protein (DUF2156) ARUE_c14090 PF07690 Major Facilitator Superfamily ARUE_c14110 PF01066 CDP-alcohol phosphatidyltransferase ARUE_c14130 PF00534 Glycosyl transferases group 1 ARUE_c14150 PF13195 Protein of unknown function (DUF4011) ARUE_c14150 PF13087 AAA domain ARUE_c14150 PF13086 AAA domain ARUE_c14160 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c14160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c14160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c14170 PF00318 Ribosomal protein S2 ARUE_c14180 PF00889 Elongation factor TS ARUE_c14190 PF00696 Amino acid kinase family ARUE_c14200 PF01765 Ribosome recycling factor ARUE_c14240 PF00474 Sodium:solute symporter family ARUE_c14260 PF00072 Response regulator receiver domain ARUE_c14260 PF04397 LytTr DNA-binding domain ARUE_c14270 PF07694 5TMR of 5TMR-LYT ARUE_c14270 PF06580 Histidine kinase ARUE_c14290 PF00474 Sodium:solute symporter family ARUE_c14300 PF02811 PHP domain ARUE_c14300 PF14791 DNA polymerase beta thumb ARUE_c14300 PF14716 Helix-hairpin-helix domain ARUE_c14340 PF01037 Lrp/AsnC ligand binding domain ARUE_c14350 PF00676 Dehydrogenase E1 component ARUE_c14360 PF02780 Transketolase, C-terminal domain ARUE_c14360 PF02779 Transketolase, pyrimidine binding domain ARUE_c14370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ARUE_c14370 PF00364 Biotin-requiring enzyme ARUE_c14370 PF02817 e3 binding domain ARUE_c14380 PF16363 GDP-mannose 4,6 dehydratase ARUE_c14410 PF01039 Carboxyl transferase domain ARUE_c14420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ARUE_c14420 PF02785 Biotin carboxylase C-terminal domain ARUE_c14420 PF00364 Biotin-requiring enzyme ARUE_c14420 PF00289 Biotin carboxylase, N-terminal domain ARUE_c14430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c14430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c14430 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c14440 PF01144 Coenzyme A transferase ARUE_c14450 PF01144 Coenzyme A transferase ARUE_c14470 PF03328 HpcH/HpaI aldolase/citrate lyase family ARUE_c14480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c14480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c14500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c14500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c14510 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c14520 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c14530 PF01547 Bacterial extracellular solute-binding protein ARUE_c14540 PF00356 Bacterial regulatory proteins, lacI family ARUE_c14560 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ARUE_c14560 PF13288 DXP reductoisomerase C-terminal domain ARUE_c14560 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ARUE_c14570 PF02163 Peptidase family M50 ARUE_c14570 PF17820 PDZ domain ARUE_c14590 PF04551 GcpE protein ARUE_c14620 PF00440 Bacterial regulatory proteins, tetR family ARUE_c14640 PF00005 ABC transporter ARUE_c14650 PF03129 Anticodon binding domain ARUE_c14650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ARUE_c14650 PF04073 Aminoacyl-tRNA editing domain ARUE_c14660 PF01925 Sulfite exporter TauE/SafE ARUE_c14670 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase ARUE_c14700 PF02576 RimP N-terminal domain ARUE_c14700 PF17384 RimP C-terminal SH3 domain ARUE_c14710 PF08529 NusA N-terminal domain ARUE_c14710 PF13184 NusA-like KH domain ARUE_c14730 PF00009 Elongation factor Tu GTP binding domain ARUE_c14730 PF11987 Translation-initiation factor 2 ARUE_c14730 PF04760 Translation initiation factor IF-2, N-terminal region ARUE_c14740 PF02033 Ribosome-binding factor A ARUE_c14750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ARUE_c14770 PF01509 TruB family pseudouridylate synthase (N terminal domain) ARUE_c14770 PF09142 tRNA Pseudouridine synthase II, C terminal ARUE_c14770 PF16198 tRNA pseudouridylate synthase B C-terminal domain ARUE_c14800 PF06574 FAD synthetase ARUE_c14800 PF01687 Riboflavin kinase ARUE_c14810 PF00312 Ribosomal protein S15 ARUE_c14820 PF00013 KH domain ARUE_c14820 PF00575 S1 RNA binding domain ARUE_c14820 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ARUE_c14820 PF01138 3' exoribonuclease family, domain 1 ARUE_c14830 PF00675 Insulinase (Peptidase family M16) ARUE_c14830 PF05193 Peptidase M16 inactive domain ARUE_c14860 PF04055 Radical SAM superfamily ARUE_c14860 PF06463 Molybdenum Cofactor Synthesis C ARUE_c14870 PF00486 Transcriptional regulatory protein, C terminal ARUE_c14870 PF00072 Response regulator receiver domain ARUE_c14880 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c14880 PF00672 HAMP domain ARUE_c14880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c14900 PF00994 Probable molybdopterin binding domain ARUE_c14900 PF03454 MoeA C-terminal region (domain IV) ARUE_c14900 PF03453 MoeA N-terminal region (domain I and II) ARUE_c14910 PF01967 MoaC family ARUE_c14920 PF00994 Probable molybdopterin binding domain ARUE_c14930 PF02391 MoaE protein ARUE_c14940 PF05173 Dihydrodipicolinate reductase, C-terminus ARUE_c14940 PF01113 Dihydrodipicolinate reductase, N-terminus ARUE_c14980 PF00701 Dihydrodipicolinate synthetase family ARUE_c14990 PF17770 Ribonuclease J C-terminal domain ARUE_c14990 PF12706 Beta-lactamase superfamily domain ARUE_c14990 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ARUE_c15000 PF17854 FtsK alpha domain ARUE_c15000 PF09397 Ftsk gamma domain ARUE_c15000 PF01580 FtsK/SpoIIIE family ARUE_c15020 PF02464 Competence-damaged protein ARUE_c15020 PF18146 Damage-inducible protein CinA KH domain ARUE_c15020 PF00994 Probable molybdopterin binding domain ARUE_c15040 PF01047 MarR family ARUE_c15060 PF00154 recA bacterial DNA recombination protein ARUE_c15070 PF02631 RecX family ARUE_c15080 PF04055 Radical SAM superfamily ARUE_c15080 PF00919 Uncharacterized protein family UPF0004 ARUE_c15080 PF01938 TRAM domain ARUE_c15100 PF01678 Diaminopimelate epimerase ARUE_c15110 PF05175 Methyltransferase small domain ARUE_c15120 PF01926 50S ribosome-binding GTPase ARUE_c15120 PF16360 GTP-binding GTPase Middle Region ARUE_c15120 PF13167 GTP-binding GTPase N-terminal ARUE_c15130 PF13307 Helicase C-terminal domain ARUE_c15140 PF01726 LexA DNA binding domain ARUE_c15140 PF00717 Peptidase S24-like ARUE_c15150 PF01476 LysM domain ARUE_c15160 PF00155 Aminotransferase class I and II ARUE_c15170 PF00475 Imidazoleglycerol-phosphate dehydratase ARUE_c15180 PF00117 Glutamine amidotransferase class-I ARUE_c15190 PF00977 Histidine biosynthesis protein ARUE_c15230 PF05198 Translation initiation factor IF-3, N-terminal domain ARUE_c15230 PF00707 Translation initiation factor IF-3, C-terminal domain ARUE_c15240 PF01632 Ribosomal protein L35 ARUE_c15250 PF00453 Ribosomal protein L20 ARUE_c15260 PF00588 SpoU rRNA Methylase family ARUE_c15260 PF08032 RNA 2'-O ribose methyltransferase substrate binding ARUE_c15280 PF07690 Major Facilitator Superfamily ARUE_c15290 PF00293 NUDIX domain ARUE_c15300 PF04055 Radical SAM superfamily ARUE_c15310 PF01470 Pyroglutamyl peptidase ARUE_c15340 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ARUE_c15340 PF01409 tRNA synthetases class II core domain (F) ARUE_c15350 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ARUE_c15350 PF01588 Putative tRNA binding domain ARUE_c15350 PF03147 Ferredoxin-fold anticodon binding domain ARUE_c15350 PF03484 tRNA synthetase B5 domain ARUE_c15350 PF03483 B3/4 domain ARUE_c15360 PF00089 Trypsin ARUE_c15390 PF07993 Male sterility protein ARUE_c15390 PF00550 Phosphopantetheine attachment site ARUE_c15390 PF00501 AMP-binding enzyme ARUE_c15390 PF00668 Condensation domain ARUE_c15390 PF13193 AMP-binding enzyme C-terminal domain ARUE_c15400 PF00107 Zinc-binding dehydrogenase ARUE_c15400 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c15420 PF02774 Semialdehyde dehydrogenase, dimerisation domain ARUE_c15420 PF01118 Semialdehyde dehydrogenase, NAD binding domain ARUE_c15430 PF01960 ArgJ family ARUE_c15440 PF00696 Amino acid kinase family ARUE_c15450 PF00202 Aminotransferase class-III ARUE_c15460 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ARUE_c15460 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ARUE_c15470 PF02863 Arginine repressor, C-terminal domain ARUE_c15470 PF01316 Arginine repressor, DNA binding domain ARUE_c15480 PF00764 Arginosuccinate synthase ARUE_c15490 PF14698 Argininosuccinate lyase C-terminal ARUE_c15490 PF00206 Lyase ARUE_c15510 PF02805 Metal binding domain of Ada ARUE_c15510 PF06029 AlkA N-terminal domain ARUE_c15510 PF12833 Helix-turn-helix domain ARUE_c15510 PF00730 HhH-GPD superfamily base excision DNA repair protein ARUE_c15520 PF02245 Methylpurine-DNA glycosylase (MPG) ARUE_c15540 PF00579 tRNA synthetases class I (W and Y) ARUE_c15600 PF18407 GCN5-related N-acetyltransferase like domain ARUE_c15600 PF13344 Haloacid dehalogenase-like hydrolase ARUE_c15620 PF01728 FtsJ-like methyltransferase ARUE_c15620 PF01479 S4 domain ARUE_c15630 PF01513 ATP-NAD kinase ARUE_c15640 PF02463 RecF/RecN/SMC N terminal domain ARUE_c15650 PF06418 CTP synthase N-terminus ARUE_c15650 PF00117 Glutamine amidotransferase class-I ARUE_c15670 PF02899 Phage integrase, N-terminal SAM-like domain ARUE_c15670 PF00589 Phage integrase family ARUE_c15700 PF00285 Citrate synthase, C-terminal domain ARUE_c15720 PF03972 MmgE/PrpD family ARUE_c15730 PF00392 Bacterial regulatory proteins, gntR family ARUE_c15730 PF07729 FCD domain ARUE_c15750 PF00196 Bacterial regulatory proteins, luxR family ARUE_c15750 PF00072 Response regulator receiver domain ARUE_c15760 PF00072 Response regulator receiver domain ARUE_c15760 PF04703 FaeA-like protein ARUE_c15770 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ARUE_c15770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c15770 PF00989 PAS fold ARUE_c15770 PF17203 Single cache domain 3 ARUE_c15780 PF00375 Sodium:dicarboxylate symporter family ARUE_c15790 PF13614 AAA domain ARUE_c15800 PF02616 Segregation and condensation protein ScpA ARUE_c15810 PF04079 Segregation and condensation complex subunit ScpB ARUE_c15820 PF01479 S4 domain ARUE_c15820 PF00849 RNA pseudouridylate synthase ARUE_c15830 PF02153 Prephenate dehydrogenase ARUE_c15840 PF02224 Cytidylate kinase ARUE_c15860 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ARUE_c15860 PF01926 50S ribosome-binding GTPase ARUE_c15880 PF01047 MarR family ARUE_c15890 PF07690 Major Facilitator Superfamily ARUE_c15900 PF01597 Glycine cleavage H-protein ARUE_c15910 PF00498 FHA domain ARUE_c15920 PF00376 MerR family regulatory protein ARUE_c15930 PF02577 Bifunctional nuclease ARUE_c15940 PF13411 MerR HTH family regulatory protein ARUE_c15950 PF13614 AAA domain ARUE_c15960 PF00364 Biotin-requiring enzyme ARUE_c15960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ARUE_c15960 PF02436 Conserved carboxylase domain ARUE_c15960 PF00289 Biotin carboxylase, N-terminal domain ARUE_c15960 PF02785 Biotin carboxylase C-terminal domain ARUE_c15960 PF00682 HMGL-like ARUE_c15970 PF00501 AMP-binding enzyme ARUE_c15980 PF00480 ROK family ARUE_c16000 PF12146 Serine aminopeptidase, S33 ARUE_c16030 PF01474 Class-II DAHP synthetase family ARUE_c16040 PF00069 Protein kinase domain ARUE_c16040 PF03793 PASTA domain ARUE_c16050 PF01476 LysM domain ARUE_c16050 PF05257 CHAP domain ARUE_c16080 PF00348 Polyprenyl synthetase ARUE_c16120 PF02381 MraZ protein, putative antitoxin-like ARUE_c16130 PF01795 MraW methylase family ARUE_c16150 PF00905 Penicillin binding protein transpeptidase domain ARUE_c16150 PF03717 Penicillin-binding Protein dimerisation domain ARUE_c16160 PF02875 Mur ligase family, glutamate ligase domain ARUE_c16160 PF08245 Mur ligase middle domain ARUE_c16160 PF01225 Mur ligase family, catalytic domain ARUE_c16170 PF08245 Mur ligase middle domain ARUE_c16170 PF01225 Mur ligase family, catalytic domain ARUE_c16170 PF02875 Mur ligase family, glutamate ligase domain ARUE_c16180 PF00953 Glycosyl transferase family 4 ARUE_c16190 PF08245 Mur ligase middle domain ARUE_c16190 PF02875 Mur ligase family, glutamate ligase domain ARUE_c16200 PF01098 Cell cycle protein ARUE_c16210 PF04101 Glycosyltransferase family 28 C-terminal domain ARUE_c16210 PF03033 Glycosyltransferase family 28 N-terminal domain ARUE_c16220 PF02875 Mur ligase family, glutamate ligase domain ARUE_c16220 PF08245 Mur ligase middle domain ARUE_c16220 PF01225 Mur ligase family, catalytic domain ARUE_c16240 PF12327 FtsZ family, C-terminal domain ARUE_c16240 PF00091 Tubulin/FtsZ family, GTPase domain ARUE_c16260 PF01168 Alanine racemase, N-terminal domain ARUE_c16270 PF04472 Cell division protein SepF ARUE_c16290 PF05103 DivIVA protein ARUE_c16300 PF01252 Signal peptidase (SPase) II ARUE_c16310 PF00849 RNA pseudouridylate synthase ARUE_c16320 PF02811 PHP domain ARUE_c16320 PF14579 Helix-hairpin-helix motif ARUE_c16320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ARUE_c16320 PF07733 Bacterial DNA polymerase III alpha NTPase domain ARUE_c16330 PF01613 Flavin reductase like domain ARUE_c16350 PF00815 Histidinol dehydrogenase ARUE_c16360 PF03477 ATP cone domain ARUE_c16380 PF00480 ROK family ARUE_c16390 PF00557 Metallopeptidase family M24 ARUE_c16410 PF02548 Ketopantoate hydroxymethyltransferase ARUE_c16420 PF03951 Glutamine synthetase, beta-Grasp domain ARUE_c16420 PF00120 Glutamine synthetase, catalytic domain ARUE_c16430 PF03710 Glutamate-ammonia ligase adenylyltransferase ARUE_c16430 PF08335 GlnD PII-uridylyltransferase ARUE_c16440 PF00884 Sulfatase ARUE_c16440 PF16347 Domain of unknown function (DUF4976) ARUE_c16480 PF00120 Glutamine synthetase, catalytic domain ARUE_c16480 PF03951 Glutamine synthetase, beta-Grasp domain ARUE_c16510 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ARUE_c16510 PF04055 Radical SAM superfamily ARUE_c16520 PF03099 Biotin/lipoate A/B protein ligase family ARUE_c16540 PF08338 Domain of unknown function (DUF1731) ARUE_c16540 PF01370 NAD dependent epimerase/dehydratase family ARUE_c16550 PF07676 WD40-like Beta Propeller Repeat ARUE_c16550 PF03572 Peptidase family S41 ARUE_c16550 PF14684 Tricorn protease C1 domain ARUE_c16550 PF14685 Tricorn protease PDZ domain ARUE_c16560 PF02566 OsmC-like protein ARUE_c16590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ARUE_c16590 PF02817 e3 binding domain ARUE_c16590 PF00364 Biotin-requiring enzyme ARUE_c16600 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c16600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ARUE_c16610 PF02789 Cytosol aminopeptidase family, N-terminal domain ARUE_c16610 PF00883 Cytosol aminopeptidase family, catalytic domain ARUE_c16650 PF04539 Sigma-70 region 3 ARUE_c16650 PF00140 Sigma-70 factor, region 1.2 ARUE_c16650 PF04542 Sigma-70 region 2 ARUE_c16650 PF04545 Sigma-70, region 4 ARUE_c16670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c16670 PF01751 Toprim domain ARUE_c16670 PF00204 DNA gyrase B ARUE_c16670 PF00986 DNA gyrase B subunit, carboxyl terminus ARUE_c16680 PF07690 Major Facilitator Superfamily ARUE_c16710 PF03965 Penicillinase repressor ARUE_c16720 PF01654 Cytochrome bd terminal oxidase subunit I ARUE_c16730 PF02322 Cytochrome bd terminal oxidase subunit II ARUE_c16740 PF00664 ABC transporter transmembrane region ARUE_c16740 PF00005 ABC transporter ARUE_c16780 PF00521 DNA gyrase/topoisomerase IV, subunit A ARUE_c16780 PF03989 DNA gyrase C-terminal domain, beta-propeller ARUE_c16790 PF13607 Succinyl-CoA ligase like flavodoxin domain ARUE_c16790 PF00583 Acetyltransferase (GNAT) family ARUE_c16790 PF13380 CoA binding domain ARUE_c16820 PF00265 Thymidine kinase ARUE_c16830 PF11268 Protein of unknown function (DUF3071) ARUE_c16860 PF00692 dUTPase ARUE_c16900 PF02080 TrkA-C domain ARUE_c16900 PF02254 TrkA-N domain ARUE_c16910 PF02254 TrkA-N domain ARUE_c16910 PF02080 TrkA-C domain ARUE_c16920 PF13520 Amino acid permease ARUE_c16930 PF01938 TRAM domain ARUE_c16930 PF05958 tRNA (Uracil-5-)-methyltransferase ARUE_c16940 PF00330 Aconitase family (aconitate hydratase) ARUE_c16940 PF00694 Aconitase C-terminal domain ARUE_c16950 PF02779 Transketolase, pyrimidine binding domain ARUE_c16950 PF02780 Transketolase, C-terminal domain ARUE_c16950 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ARUE_c16990 PF00248 Aldo/keto reductase family ARUE_c17000 PF00378 Enoyl-CoA hydratase/isomerase ARUE_c17000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ARUE_c17000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ARUE_c17010 PF00108 Thiolase, N-terminal domain ARUE_c17010 PF02803 Thiolase, C-terminal domain ARUE_c17020 PF00570 HRDC domain ARUE_c17020 PF01612 3'-5' exonuclease ARUE_c17040 PF01212 Beta-eliminating lyase ARUE_c17070 PF01641 SelR domain ARUE_c17100 PF04073 Aminoacyl-tRNA editing domain ARUE_c17110 PF02657 Fe-S metabolism associated domain ARUE_c17120 PF00581 Rhodanese-like domain ARUE_c17130 PF08299 Bacterial dnaA protein helix-turn-helix ARUE_c17130 PF00308 Bacterial dnaA protein ARUE_c17130 PF11638 DnaA N-terminal domain ARUE_c17140 PF03594 Benzoate membrane transport protein ARUE_c17160 PF13520 Amino acid permease ARUE_c17230 PF01327 Polypeptide deformylase ARUE_c17240 PF02911 Formyl transferase, C-terminal domain ARUE_c17240 PF00551 Formyl transferase ARUE_c17250 PF01029 NusB family ARUE_c17250 PF01189 16S rRNA methyltransferase RsmB/F ARUE_c17260 PF00834 Ribulose-phosphate 3 epimerase family ARUE_c17280 PF01872 RibD C-terminal domain ARUE_c17280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ARUE_c17290 PF00677 Lumazine binding domain ARUE_c17300 PF00925 GTP cyclohydrolase II ARUE_c17300 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ARUE_c17310 PF00925 GTP cyclohydrolase II ARUE_c17310 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ARUE_c17320 PF00885 6,7-dimethyl-8-ribityllumazine synthase ARUE_c17330 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ARUE_c17340 PF08029 HisG, C-terminal domain ARUE_c17340 PF01634 ATP phosphoribosyltransferase ARUE_c17350 PF00977 Histidine biosynthesis protein ARUE_c17370 PF01502 Phosphoribosyl-AMP cyclohydrolase ARUE_c17380 PF00425 chorismate binding enzyme ARUE_c17380 PF04715 Anthranilate synthase component I, N terminal region ARUE_c17410 PF00218 Indole-3-glycerol phosphate synthase ARUE_c17420 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c17430 PF00290 Tryptophan synthase alpha chain ARUE_c17440 PF01790 Prolipoprotein diacylglyceryl transferase ARUE_c17450 PF01493 GXGXG motif ARUE_c17450 PF01645 Conserved region in glutamate synthase ARUE_c17450 PF00310 Glutamine amidotransferases class-II ARUE_c17450 PF04898 Glutamate synthase central domain ARUE_c17460 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ARUE_c17460 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c17470 PF00224 Pyruvate kinase, barrel domain ARUE_c17470 PF02887 Pyruvate kinase, alpha/beta domain ARUE_c17480 PF03861 ANTAR domain ARUE_c17480 PF00072 Response regulator receiver domain ARUE_c17670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c17670 PF03466 LysR substrate binding domain ARUE_c17700 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c17710 PF01261 Xylose isomerase-like TIM barrel ARUE_c17780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c17780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c17830 PF00480 ROK family ARUE_c17830 PF01325 Iron dependent repressor, N-terminal DNA binding domain ARUE_c17840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c17840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c17860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c17870 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c17890 PF01494 FAD binding domain ARUE_c17910 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c17920 PF07690 Major Facilitator Superfamily ARUE_c17970 PF02801 Beta-ketoacyl synthase, C-terminal domain ARUE_c17970 PF00109 Beta-ketoacyl synthase, N-terminal domain ARUE_c18030 PF00158 Sigma-54 interaction domain ARUE_c18030 PF02954 Bacterial regulatory protein, Fis family ARUE_c18030 PF13185 GAF domain ARUE_c18040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c18040 PF01842 ACT domain ARUE_c18040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c18050 PF00202 Aminotransferase class-III ARUE_c18060 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c18070 PF01968 Hydantoinase/oxoprolinase ARUE_c18070 PF05378 Hydantoinase/oxoprolinase N-terminal region ARUE_c18090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c18090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c18100 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c18100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c18100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c18110 PF00171 Aldehyde dehydrogenase family ARUE_c18120 PF10518 TAT (twin-arginine translocation) pathway signal sequence ARUE_c18120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c18130 PF00106 short chain dehydrogenase ARUE_c18140 PF00920 Dehydratase family ARUE_c18150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c18160 PF13520 Amino acid permease ARUE_c18170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c18170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c18190 PF02653 Branched-chain amino acid transport system / permease component ARUE_c18200 PF13407 Periplasmic binding protein domain ARUE_c18210 PF02913 FAD linked oxidases, C-terminal domain ARUE_c18210 PF01565 FAD binding domain ARUE_c18210 PF13183 4Fe-4S dicluster domain ARUE_c18310 PF00067 Cytochrome P450 ARUE_c18320 PF14759 Reductase C-terminal ARUE_c18320 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c18330 PF07690 Major Facilitator Superfamily ARUE_c18340 PF00440 Bacterial regulatory proteins, tetR family ARUE_c18340 PF13977 BetI-type transcriptional repressor, C-terminal ARUE_c18360 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c18360 PF00107 Zinc-binding dehydrogenase ARUE_c18370 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c18390 PF01614 Bacterial transcriptional regulator ARUE_c18390 PF09339 IclR helix-turn-helix domain ARUE_c18420 PF00920 Dehydratase family ARUE_c18440 PF14310 Fibronectin type III-like domain ARUE_c18440 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c18440 PF01915 Glycosyl hydrolase family 3 C-terminal domain ARUE_c18470 PF00356 Bacterial regulatory proteins, lacI family ARUE_c18490 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c18510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c18510 PF00005 ABC transporter ARUE_c18530 PF07690 Major Facilitator Superfamily ARUE_c18600 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ARUE_c18600 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term ARUE_c18610 PF01261 Xylose isomerase-like TIM barrel ARUE_c18620 PF00121 Triosephosphate isomerase ARUE_c18630 PF02502 Ribose/Galactose Isomerase ARUE_c18640 PF02733 Dak1 domain ARUE_c18640 PF02734 DAK2 domain ARUE_c18650 PF07690 Major Facilitator Superfamily ARUE_c18660 PF07729 FCD domain ARUE_c18660 PF00392 Bacterial regulatory proteins, gntR family ARUE_c18670 PF00440 Bacterial regulatory proteins, tetR family ARUE_c18720 PF14310 Fibronectin type III-like domain ARUE_c18720 PF01915 Glycosyl hydrolase family 3 C-terminal domain ARUE_c18720 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c18760 PF00106 short chain dehydrogenase ARUE_c18770 PF17754 MftR C-terminal domain ARUE_c18770 PF00440 Bacterial regulatory proteins, tetR family ARUE_c18780 PF00378 Enoyl-CoA hydratase/isomerase ARUE_c18800 PF00440 Bacterial regulatory proteins, tetR family ARUE_c18800 PF17926 Tetracyclin repressor-like, C-terminal domain ARUE_c18810 PF04303 PrpF protein ARUE_c18820 PF00171 Aldehyde dehydrogenase family ARUE_c18830 PF02515 CoA-transferase family III ARUE_c18870 PF00067 Cytochrome P450 ARUE_c18900 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c18900 PF14759 Reductase C-terminal ARUE_c19000 PF02803 Thiolase, C-terminal domain ARUE_c19000 PF00108 Thiolase, N-terminal domain ARUE_c19020 PF00378 Enoyl-CoA hydratase/isomerase ARUE_c19080 PF00083 Sugar (and other) transporter ARUE_c19080 PF08946 Osmosensory transporter coiled coil ARUE_c19100 PF06865 Pyrimidine/purine nucleoside phosphorylase ARUE_c19150 PF01546 Peptidase family M20/M25/M40 ARUE_c19200 PF03737 Aldolase/RraA ARUE_c19220 PF01970 Tripartite tricarboxylate transporter TctA family ARUE_c19250 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c19260 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c19270 PF00149 Calcineurin-like phosphoesterase ARUE_c19280 PF13350 Tyrosine phosphatase family ARUE_c19300 PF00005 ABC transporter ARUE_c19300 PF17912 MalK OB fold domain ARUE_c19330 PF00005 ABC transporter ARUE_c19380 PF00005 ABC transporter ARUE_c19390 PF00582 Universal stress protein family ARUE_c19400 PF00258 Flavodoxin ARUE_c19430 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c19440 PF00582 Universal stress protein family ARUE_c19460 PF00582 Universal stress protein family ARUE_c19470 PF10996 Beta-Casp domain ARUE_c19470 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ARUE_c19470 PF00753 Metallo-beta-lactamase superfamily ARUE_c19490 PF00072 Response regulator receiver domain ARUE_c19490 PF00196 Bacterial regulatory proteins, luxR family ARUE_c19500 PF13185 GAF domain ARUE_c19500 PF13492 GAF domain ARUE_c19500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c19500 PF07730 Histidine kinase ARUE_c19530 PF00107 Zinc-binding dehydrogenase ARUE_c19530 PF13823 Alcohol dehydrogenase GroES-associated ARUE_c19530 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c19560 PF07085 DRTGG domain ARUE_c19560 PF01515 Phosphate acetyl/butaryl transferase ARUE_c19580 PF00689 Cation transporting ATPase, C-terminus ARUE_c19580 PF00690 Cation transporter/ATPase, N-terminus ARUE_c19600 PF00582 Universal stress protein family ARUE_c19610 PF00871 Acetokinase family ARUE_c19620 PF09363 XFP C-terminal domain ARUE_c19620 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase ARUE_c19620 PF09364 XFP N-terminal domain ARUE_c19650 PF03315 Serine dehydratase beta chain ARUE_c19650 PF03313 Serine dehydratase alpha chain ARUE_c19660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c19660 PF03466 LysR substrate binding domain ARUE_c19680 PF07690 Major Facilitator Superfamily ARUE_c19730 PF00083 Sugar (and other) transporter ARUE_c19730 PF08946 Osmosensory transporter coiled coil ARUE_c19750 PF01081 KDPG and KHG aldolase ARUE_c19770 PF00356 Bacterial regulatory proteins, lacI family ARUE_c19850 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c19860 PF14785 Maltose transport system permease protein MalF P2 domain ARUE_c19860 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c19880 PF06772 Bacterial low temperature requirement A protein (LtrA) ARUE_c19910 PF01717 Cobalamin-independent synthase, Catalytic domain ARUE_c19930 PF03466 LysR substrate binding domain ARUE_c19930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c19950 PF00248 Aldo/keto reductase family ARUE_c19970 PF06736 Protein of unknown function (DUF1211) ARUE_c19980 PF18011 C-terminal domain found in long catalases ARUE_c19980 PF00199 Catalase ARUE_c19980 PF06628 Catalase-related immune-responsive ARUE_c20000 PF13823 Alcohol dehydrogenase GroES-associated ARUE_c20000 PF00107 Zinc-binding dehydrogenase ARUE_c20000 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c20010 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c20010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ARUE_c20030 PF10442 FIST C domain ARUE_c20030 PF00563 EAL domain ARUE_c20030 PF00990 Diguanylate cyclase, GGDEF domain ARUE_c20030 PF08495 FIST N domain ARUE_c20070 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c20080 PF00012 Hsp70 protein ARUE_c20090 PF01025 GrpE ARUE_c20100 PF01556 DnaJ C terminal domain ARUE_c20100 PF00226 DnaJ domain ARUE_c20120 PF10431 C-terminal, D2-small domain, of ClpB protein ARUE_c20120 PF17871 AAA lid domain ARUE_c20120 PF02861 Clp amino terminal domain, pathogenicity island component ARUE_c20120 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c20120 PF07724 AAA domain (Cdc48 subfamily) ARUE_c20130 PF00085 Thioredoxin ARUE_c20170 PF00480 ROK family ARUE_c20180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c20180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c20190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c20190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c20200 PF02653 Branched-chain amino acid transport system / permease component ARUE_c20210 PF13407 Periplasmic binding protein domain ARUE_c20220 PF01261 Xylose isomerase-like TIM barrel ARUE_c20230 PF01261 Xylose isomerase-like TIM barrel ARUE_c20240 PF00005 ABC transporter ARUE_c20260 PF00391 PEP-utilising enzyme, mobile domain ARUE_c20260 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ARUE_c20260 PF02896 PEP-utilising enzyme, TIM barrel domain ARUE_c20270 PF03618 Kinase/pyrophosphorylase ARUE_c20280 PF02661 Fic/DOC family ARUE_c20290 PF12833 Helix-turn-helix domain ARUE_c20290 PF14525 AraC-binding-like domain ARUE_c20300 PF00795 Carbon-nitrogen hydrolase ARUE_c20320 PF01915 Glycosyl hydrolase family 3 C-terminal domain ARUE_c20320 PF07691 PA14 domain ARUE_c20320 PF14310 Fibronectin type III-like domain ARUE_c20320 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c20330 PF04101 Glycosyltransferase family 28 C-terminal domain ARUE_c20330 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase ARUE_c20350 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c20350 PF00107 Zinc-binding dehydrogenase ARUE_c20360 PF07005 Sugar-binding N-terminal domain ARUE_c20360 PF17042 Nucleotide-binding C-terminal domain ARUE_c20370 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain ARUE_c20370 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain ARUE_c20380 PF03812 2-keto-3-deoxygluconate permease ARUE_c20390 PF00392 Bacterial regulatory proteins, gntR family ARUE_c20390 PF07729 FCD domain ARUE_c20420 PF16555 Gram-positive pilin subunit D1, N-terminal domain ARUE_c20420 PF00746 LPXTG cell wall anchor motif ARUE_c20460 PF13382 Adenine deaminase C-terminal domain ARUE_c20460 PF01979 Amidohydrolase family ARUE_c20470 PF01212 Beta-eliminating lyase ARUE_c20480 PF00005 ABC transporter ARUE_c20480 PF08402 TOBE domain ARUE_c20490 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c20520 PF00083 Sugar (and other) transporter ARUE_c20520 PF07690 Major Facilitator Superfamily ARUE_c20530 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ARUE_c20540 PF00941 FAD binding domain in molybdopterin dehydrogenase ARUE_c20540 PF03450 CO dehydrogenase flavoprotein C-terminal domain ARUE_c20550 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_c20550 PF01799 [2Fe-2S] binding domain ARUE_c20560 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ARUE_c20560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ARUE_c20590 PF01042 Endoribonuclease L-PSP ARUE_c20620 PF00561 alpha/beta hydrolase fold ARUE_c20640 PF00106 short chain dehydrogenase ARUE_c20650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c20650 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c20650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c20670 PF00355 Rieske [2Fe-2S] domain ARUE_c20690 PF01047 MarR family ARUE_c20700 PF03447 Homoserine dehydrogenase, NAD binding domain ARUE_c20700 PF01958 Domain of unknown function DUF108 ARUE_c20710 PF00202 Aminotransferase class-III ARUE_c20730 PF00171 Aldehyde dehydrogenase family ARUE_c20740 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c20740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ARUE_c20780 PF17866 AAA lid domain ARUE_c20780 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c20790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c20790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c20800 PF00155 Aminotransferase class I and II ARUE_c20820 PF05661 Protein of unknown function (DUF808) ARUE_c20840 PF00356 Bacterial regulatory proteins, lacI family ARUE_c20850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c20860 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c20870 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c20870 PF12911 N-terminal TM domain of oligopeptide transport permease C ARUE_c20880 PF00005 ABC transporter ARUE_c20880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c20890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c20890 PF00005 ABC transporter ARUE_c20900 PF00251 Glycosyl hydrolases family 32 N-terminal domain ARUE_c20900 PF08244 Glycosyl hydrolases family 32 C terminal ARUE_c20910 PF00251 Glycosyl hydrolases family 32 N-terminal domain ARUE_c20910 PF08244 Glycosyl hydrolases family 32 C terminal ARUE_c20920 PF00294 pfkB family carbohydrate kinase ARUE_c20930 PF00005 ABC transporter ARUE_c20930 PF08402 TOBE domain ARUE_c20940 PF00950 ABC 3 transport family ARUE_c20990 PF04303 PrpF protein ARUE_c21000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c21000 PF03466 LysR substrate binding domain ARUE_c21020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c21020 PF03466 LysR substrate binding domain ARUE_c21030 PF13193 AMP-binding enzyme C-terminal domain ARUE_c21030 PF00501 AMP-binding enzyme ARUE_c21050 PF00083 Sugar (and other) transporter ARUE_c21070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c21070 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c21070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c21100 PF00392 Bacterial regulatory proteins, gntR family ARUE_c21100 PF07729 FCD domain ARUE_c21110 PF00171 Aldehyde dehydrogenase family ARUE_c21140 PF00005 ABC transporter ARUE_c21180 PF01266 FAD dependent oxidoreductase ARUE_c21190 PF00171 Aldehyde dehydrogenase family ARUE_c21200 PF00180 Isocitrate/isopropylmalate dehydrogenase ARUE_c21210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c21220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c21230 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c21240 PF12911 N-terminal TM domain of oligopeptide transport permease C ARUE_c21240 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c21250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c21250 PF00005 ABC transporter ARUE_c21290 PF14552 Tautomerase enzyme ARUE_c21300 PF00294 pfkB family carbohydrate kinase ARUE_c21320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c21320 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c21320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c21330 PF00171 Aldehyde dehydrogenase family ARUE_c21340 PF01261 Xylose isomerase-like TIM barrel ARUE_c21350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c21360 PF01261 Xylose isomerase-like TIM barrel ARUE_c21370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c21370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c21400 PF00356 Bacterial regulatory proteins, lacI family ARUE_c21420 PF02653 Branched-chain amino acid transport system / permease component ARUE_c21430 PF00005 ABC transporter ARUE_c21440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c21450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c21460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c21460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c21480 PF04962 KduI/IolB family ARUE_c21510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ARUE_c21510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ARUE_c21520 PF00501 AMP-binding enzyme ARUE_c21530 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ARUE_c21540 PF13520 Amino acid permease ARUE_c21580 PF00313 'Cold-shock' DNA-binding domain ARUE_c21590 PF00999 Sodium/hydrogen exchanger family ARUE_c21610 PF01068 ATP dependent DNA ligase domain ARUE_c21610 PF13298 DNA polymerase Ligase (LigD) ARUE_c21610 PF04679 ATP dependent DNA ligase C terminal region ARUE_c21630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c21630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c21630 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c21640 PF17755 UvrA DNA-binding domain ARUE_c21670 PF03462 PCRF domain ARUE_c21670 PF00472 RF-1 domain ARUE_c21680 PF00005 ABC transporter ARUE_c21690 PF01497 Periplasmic binding protein ARUE_c21700 PF01032 FecCD transport family ARUE_c21780 PF01872 RibD C-terminal domain ARUE_c21800 PF05762 VWA domain containing CoxE-like protein ARUE_c21820 PF07728 AAA domain (dynein-related subfamily) ARUE_c21850 PF07976 Phenol hydroxylase, C-terminal dimerisation domain ARUE_c21850 PF01494 FAD binding domain ARUE_c21860 PF01367 5'-3' exonuclease, C-terminal SAM fold ARUE_c21860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ARUE_c21890 PF03795 YCII-related domain ARUE_c21900 PF08281 Sigma-70, region 4 ARUE_c21900 PF04542 Sigma-70 region 2 ARUE_c21940 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c21940 PF00107 Zinc-binding dehydrogenase ARUE_c21950 PF08482 ATP-dependent helicase C-terminal ARUE_c21950 PF00271 Helicase conserved C-terminal domain ARUE_c21950 PF04408 Helicase associated domain (HA2) ARUE_c21950 PF00270 DEAD/DEAH box helicase ARUE_c21960 PF01979 Amidohydrolase family ARUE_c22000 PF03764 Elongation factor G, domain IV ARUE_c22000 PF14492 Elongation Factor G, domain II ARUE_c22000 PF00009 Elongation factor Tu GTP binding domain ARUE_c22000 PF03144 Elongation factor Tu domain 2 ARUE_c22000 PF00679 Elongation factor G C-terminus ARUE_c22040 PF01300 Telomere recombination ARUE_c22060 PF00005 ABC transporter ARUE_c22080 PF01869 BadF/BadG/BcrA/BcrD ATPase family ARUE_c22100 PF00392 Bacterial regulatory proteins, gntR family ARUE_c22100 PF07702 UTRA domain ARUE_c22120 PF00266 Aminotransferase class-V ARUE_c22130 PF03301 Tryptophan 2,3-dioxygenase ARUE_c22150 PF01384 Phosphate transporter family ARUE_c22190 PF03061 Thioesterase superfamily ARUE_c22200 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ARUE_c22200 PF01367 5'-3' exonuclease, C-terminal SAM fold ARUE_c22200 PF00476 DNA polymerase family A ARUE_c22210 PF13530 Sterol carrier protein domain ARUE_c22210 PF17668 Acetyltransferase (GNAT) domain ARUE_c22240 PF00575 S1 RNA binding domain ARUE_c22250 PF09186 Domain of unknown function (DUF1949) ARUE_c22250 PF01205 Uncharacterized protein family UPF0029 ARUE_c22260 PF01121 Dephospho-CoA kinase ARUE_c22260 PF04229 GrpB protein ARUE_c22270 PF00271 Helicase conserved C-terminal domain ARUE_c22270 PF04851 Type III restriction enzyme, res subunit ARUE_c22270 PF02151 UvrB/uvrC motif ARUE_c22270 PF17757 UvrB interaction domain ARUE_c22270 PF12344 Ultra-violet resistance protein B ARUE_c22280 PF03741 Integral membrane protein TerC family ARUE_c22300 PF00561 alpha/beta hydrolase fold ARUE_c22370 PF17760 UvrA interaction domain ARUE_c22370 PF17755 UvrA DNA-binding domain ARUE_c22370 PF00005 ABC transporter ARUE_c22380 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c22390 PF00501 AMP-binding enzyme ARUE_c22390 PF01553 Acyltransferase ARUE_c22400 PF12826 Helix-hairpin-helix motif ARUE_c22400 PF01541 GIY-YIG catalytic domain ARUE_c22400 PF02151 UvrB/uvrC motif ARUE_c22400 PF08459 UvrC Helix-hairpin-helix N-terminal ARUE_c22410 PF03668 P-loop ATPase protein family ARUE_c22420 PF01933 Uncharacterised protein family UPF0052 ARUE_c22430 PF02650 WhiA C-terminal HTH domain ARUE_c22430 PF14527 WhiA LAGLIDADG-like domain ARUE_c22430 PF10298 WhiA N-terminal LAGLIDADG-like domain ARUE_c22440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ARUE_c22440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ARUE_c22450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ARUE_c22450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ARUE_c22460 PF00162 Phosphoglycerate kinase ARUE_c22470 PF00121 Triosephosphate isomerase ARUE_c22480 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ARUE_c22500 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ARUE_c22500 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ARUE_c22510 PF00342 Phosphoglucose isomerase ARUE_c22520 PF00923 Transaldolase/Fructose-6-phosphate aldolase ARUE_c22530 PF02780 Transketolase, C-terminal domain ARUE_c22530 PF02779 Transketolase, pyrimidine binding domain ARUE_c22530 PF00456 Transketolase, thiamine diphosphate binding domain ARUE_c22540 PF01040 UbiA prenyltransferase family ARUE_c22560 PF02628 Cytochrome oxidase assembly protein ARUE_c22600 PF01458 Uncharacterized protein family (UPF0051) ARUE_c22610 PF01458 Uncharacterized protein family (UPF0051) ARUE_c22630 PF00005 ABC transporter ARUE_c22640 PF01883 Iron-sulfur cluster assembly protein ARUE_c22650 PF04228 Putative neutral zinc metallopeptidase ARUE_c22660 PF13193 AMP-binding enzyme C-terminal domain ARUE_c22660 PF00501 AMP-binding enzyme ARUE_c22670 PF00108 Thiolase, N-terminal domain ARUE_c22670 PF02803 Thiolase, C-terminal domain ARUE_c22690 PF00005 ABC transporter ARUE_c22700 PF02632 BioY family ARUE_c22710 PF12848 ABC transporter ARUE_c22710 PF16326 ABC transporter C-terminal domain ARUE_c22710 PF00005 ABC transporter ARUE_c22720 PF03129 Anticodon binding domain ARUE_c22720 PF04073 Aminoacyl-tRNA editing domain ARUE_c22720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ARUE_c22780 PF00005 ABC transporter ARUE_c22810 PF00005 ABC transporter ARUE_c22830 PF00588 SpoU rRNA Methylase family ARUE_c22840 PF01197 Ribosomal protein L31 ARUE_c22850 PF10437 Bacterial lipoate protein ligase C-terminus ARUE_c22850 PF03099 Biotin/lipoate A/B protein ligase family ARUE_c22860 PF11838 ERAP1-like C-terminal domain ARUE_c22860 PF01433 Peptidase family M1 domain ARUE_c22870 PF03601 Conserved hypothetical protein 698 ARUE_c22880 PF04174 A circularly permuted ATPgrasp ARUE_c22900 PF01841 Transglutaminase-like superfamily ARUE_c22900 PF08379 Bacterial transglutaminase-like N-terminal region ARUE_c22910 PF00106 short chain dehydrogenase ARUE_c22920 PF00483 Nucleotidyl transferase ARUE_c22930 PF00534 Glycosyl transferases group 1 ARUE_c22930 PF13439 Glycosyltransferase Family 4 ARUE_c22960 PF00108 Thiolase, N-terminal domain ARUE_c22960 PF02803 Thiolase, C-terminal domain ARUE_c23000 PF07687 Peptidase dimerisation domain ARUE_c23000 PF01546 Peptidase family M20/M25/M40 ARUE_c23040 PF02397 Bacterial sugar transferase ARUE_c23050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c23060 PF01370 NAD dependent epimerase/dehydratase family ARUE_c23070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ARUE_c23100 PF00535 Glycosyl transferase family 2 ARUE_c23150 PF13439 Glycosyltransferase Family 4 ARUE_c23150 PF00534 Glycosyl transferases group 1 ARUE_c23190 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ARUE_c23200 PF16363 GDP-mannose 4,6 dehydratase ARUE_c23210 PF00483 Nucleotidyl transferase ARUE_c23220 PF00248 Aldo/keto reductase family ARUE_c23230 PF02673 Bacitracin resistance protein BacA ARUE_c23240 PF01406 tRNA synthetases class I (C) catalytic domain ARUE_c23260 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c23270 PF00571 CBS domain ARUE_c23270 PF02163 Peptidase family M50 ARUE_c23280 PF08704 tRNA methyltransferase complex GCD14 subunit ARUE_c23290 PF17758 Proteasomal ATPase OB N-terminal domain ARUE_c23290 PF16450 Proteasomal ATPase OB C-terminal domain ARUE_c23290 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c23300 PF03136 Pup-ligase protein ARUE_c23320 PF00227 Proteasome subunit ARUE_c23330 PF00227 Proteasome subunit ARUE_c23340 PF03136 Pup-ligase protein ARUE_c23350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ARUE_c23360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ARUE_c23370 PF13280 WYL domain ARUE_c23390 PF02416 mttA/Hcf106 family ARUE_c23400 PF00902 Sec-independent protein translocase protein (TatC) ARUE_c23410 PF00270 DEAD/DEAH box helicase ARUE_c23410 PF08148 DSHCT (NUC185) domain ARUE_c23410 PF00271 Helicase conserved C-terminal domain ARUE_c23420 PF07969 Amidohydrolase family ARUE_c23430 PF00535 Glycosyl transferase family 2 ARUE_c23440 PF13397 RNA polymerase-binding protein ARUE_c23450 PF01145 SPFH domain / Band 7 family ARUE_c23480 PF00326 Prolyl oligopeptidase family ARUE_c23480 PF07676 WD40-like Beta Propeller Repeat ARUE_c23490 PF01327 Polypeptide deformylase ARUE_c23510 PF01494 FAD binding domain ARUE_c23530 PF02797 Chalcone and stilbene synthases, C-terminal domain ARUE_c23530 PF00195 Chalcone and stilbene synthases, N-terminal domain ARUE_c23540 PF17760 UvrA interaction domain ARUE_c23540 PF17755 UvrA DNA-binding domain ARUE_c23540 PF00005 ABC transporter ARUE_c23610 PF02885 Glycosyl transferase family, helical bundle domain ARUE_c23610 PF00591 Glycosyl transferase family, a/b domain ARUE_c23620 PF00510 Cytochrome c oxidase subunit III ARUE_c23630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ARUE_c23630 PF00034 Cytochrome c ARUE_c23640 PF00355 Rieske [2Fe-2S] domain ARUE_c23650 PF13631 Cytochrome b(N-terminal)/b6/petB ARUE_c23660 PF00392 Bacterial regulatory proteins, gntR family ARUE_c23660 PF07702 UTRA domain ARUE_c23670 PF00381 PTS HPr component phosphorylation site ARUE_c23680 PF12270 Cytochrome c oxidase subunit IV ARUE_c23690 PF00115 Cytochrome C and Quinol oxidase polypeptide I ARUE_c23700 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ARUE_c23710 PF01521 Iron-sulphur cluster biosynthesis ARUE_c23720 PF01546 Peptidase family M20/M25/M40 ARUE_c23720 PF07687 Peptidase dimerisation domain ARUE_c23740 PF01180 Dihydroorotate dehydrogenase ARUE_c23750 PF00890 FAD binding domain ARUE_c23770 PF12146 Serine aminopeptidase, S33 ARUE_c23780 PF01255 Putative undecaprenyl diphosphate synthase ARUE_c23790 PF11967 Recombination protein O N terminal ARUE_c23790 PF02565 Recombination protein O C terminal ARUE_c23800 PF08502 LeuA allosteric (dimerisation) domain ARUE_c23800 PF00682 HMGL-like ARUE_c23810 PF01431 Peptidase family M13 ARUE_c23810 PF05649 Peptidase family M13 ARUE_c23820 PF03816 Cell envelope-related transcriptional attenuator domain ARUE_c23830 PF07650 KH domain ARUE_c23830 PF01926 50S ribosome-binding GTPase ARUE_c23840 PF00571 CBS domain ARUE_c23840 PF03471 Transporter associated domain ARUE_c23840 PF01595 Cyclin M transmembrane N-terminal domain ARUE_c23850 PF02130 Uncharacterized protein family UPF0054 ARUE_c23860 PF02562 PhoH-like protein ARUE_c23880 PF04452 RNA methyltransferase ARUE_c23890 PF01556 DnaJ C terminal domain ARUE_c23890 PF00226 DnaJ domain ARUE_c23890 PF00684 DnaJ central domain ARUE_c23900 PF01628 HrcA protein C terminal domain ARUE_c23900 PF08220 DeoR-like helix-turn-helix domain ARUE_c23930 PF04055 Radical SAM superfamily ARUE_c23940 PF06421 GTP-binding protein LepA C-terminus ARUE_c23940 PF00009 Elongation factor Tu GTP binding domain ARUE_c23940 PF00679 Elongation factor G C-terminus ARUE_c23960 PF01649 Ribosomal protein S20 ARUE_c24000 PF02645 Uncharacterised protein, DegV family COG1307 ARUE_c24010 PF13603 Leucyl-tRNA synthetase, Domain 2 ARUE_c24010 PF09334 tRNA synthetases class I (M) ARUE_c24010 PF08264 Anticodon-binding domain of tRNA ARUE_c24010 PF00133 tRNA synthetases class I (I, L, M and V) ARUE_c24020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ARUE_c24020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ARUE_c24030 PF00230 Major intrinsic protein ARUE_c24040 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ARUE_c24040 PF01266 FAD dependent oxidoreductase ARUE_c24050 PF04198 Putative sugar-binding domain ARUE_c24060 PF00248 Aldo/keto reductase family ARUE_c24080 PF13439 Glycosyltransferase Family 4 ARUE_c24090 PF07690 Major Facilitator Superfamily ARUE_c24100 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_c24100 PF00175 Oxidoreductase NAD-binding domain ARUE_c24110 PF00355 Rieske [2Fe-2S] domain ARUE_c24130 PF17764 3′ DNA-binding domain (3′BD) ARUE_c24140 PF00438 S-adenosylmethionine synthetase, N-terminal domain ARUE_c24140 PF02772 S-adenosylmethionine synthetase, central domain ARUE_c24140 PF02773 S-adenosylmethionine synthetase, C-terminal domain ARUE_c24150 PF02441 Flavoprotein ARUE_c24150 PF04127 DNA / pantothenate metabolism flavoprotein ARUE_c24160 PF01192 RNA polymerase Rpb6 ARUE_c24170 PF00625 Guanylate kinase ARUE_c24190 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ARUE_c24200 PF02142 MGS-like domain ARUE_c24200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ARUE_c24200 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ARUE_c24210 PF00117 Glutamine amidotransferase class-I ARUE_c24210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ARUE_c24230 PF01979 Amidohydrolase family ARUE_c24240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ARUE_c24240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ARUE_c24250 PF00156 Phosphoribosyl transferase domain ARUE_c24270 PF01029 NusB family ARUE_c24280 PF01132 Elongation factor P (EF-P) OB domain ARUE_c24280 PF08207 Elongation factor P (EF-P) KOW-like domain ARUE_c24280 PF09285 Elongation factor P, C-terminal ARUE_c24300 PF01761 3-dehydroquinate synthase ARUE_c24310 PF01202 Shikimate kinase ARUE_c24320 PF01264 Chorismate synthase ARUE_c24330 PF01488 Shikimate / quinate 5-dehydrogenase ARUE_c24330 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ARUE_c24330 PF08501 Shikimate dehydrogenase substrate binding domain ARUE_c24350 PF03652 Holliday junction resolvase ARUE_c24360 PF01411 tRNA synthetases class II (A) ARUE_c24360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ARUE_c24360 PF02272 DHHA1 domain ARUE_c24390 PF00163 Ribosomal protein S4/S9 N-terminal domain ARUE_c24390 PF01479 S4 domain ARUE_c24400 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c24400 PF16193 AAA C-terminal domain ARUE_c24400 PF12002 MgsA AAA+ ATPase C terminal ARUE_c24430 PF00152 tRNA synthetases class II (D, K and N) ARUE_c24430 PF01336 OB-fold nucleic acid binding domain ARUE_c24430 PF02938 GAD domain ARUE_c24440 PF03129 Anticodon binding domain ARUE_c24440 PF13393 Histidyl-tRNA synthetase ARUE_c24460 PF03993 Domain of Unknown Function (DUF349) ARUE_c24480 PF04607 Region found in RelA / SpoT proteins ARUE_c24480 PF02824 TGS domain ARUE_c24480 PF13291 ACT domain ARUE_c24490 PF02355 Protein export membrane protein ARUE_c24490 PF07549 SecD/SecF GG Motif ARUE_c24500 PF02355 Protein export membrane protein ARUE_c24500 PF07549 SecD/SecF GG Motif ARUE_c24520 PF05496 Holliday junction DNA helicase RuvB P-loop domain ARUE_c24520 PF05491 RuvB C-terminal winged helix domain ARUE_c24520 PF17864 RuvB AAA lid domain ARUE_c24530 PF01330 RuvA N terminal domain ARUE_c24530 PF07499 RuvA, C-terminal domain ARUE_c24540 PF02075 Crossover junction endodeoxyribonuclease RuvC ARUE_c24550 PF01709 Transcriptional regulator ARUE_c24560 PF01174 SNO glutamine amidotransferase family ARUE_c24570 PF08245 Mur ligase middle domain ARUE_c24570 PF08353 Domain of unknown function (DUF1727) ARUE_c24580 PF07685 CobB/CobQ-like glutamine amidotransferase domain ARUE_c24600 PF01432 Peptidase family M3 ARUE_c24610 PF01680 SOR/SNZ family ARUE_c24630 PF01230 HIT domain ARUE_c24640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ARUE_c24640 PF03129 Anticodon binding domain ARUE_c24640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ARUE_c24650 PF07733 Bacterial DNA polymerase III alpha NTPase domain ARUE_c24650 PF14579 Helix-hairpin-helix motif ARUE_c24650 PF02811 PHP domain ARUE_c24650 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ARUE_c24670 PF01494 FAD binding domain ARUE_c24700 PF02586 SOS response associated peptidase (SRAP) ARUE_c24710 PF00462 Glutaredoxin ARUE_c24720 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c24720 PF00107 Zinc-binding dehydrogenase ARUE_c24730 PF00753 Metallo-beta-lactamase superfamily ARUE_c24740 PF00384 Molybdopterin oxidoreductase ARUE_c24740 PF01568 Molydopterin dinucleotide binding domain ARUE_c24790 PF01494 FAD binding domain ARUE_c24810 PF17761 DUF1016 N-terminal domain ARUE_c24810 PF06250 YhcG PDDEXK nuclease domain ARUE_c24820 PF01738 Dienelactone hydrolase family ARUE_c24830 PF00005 ABC transporter ARUE_c24850 PF00698 Acyl transferase domain ARUE_c24870 PF00550 Phosphopantetheine attachment site ARUE_c24880 PF07977 FabA-like domain ARUE_c24900 PF08669 Glycine cleavage T-protein C-terminal barrel domain ARUE_c24900 PF01571 Aminomethyltransferase folate-binding domain ARUE_c24910 PF02801 Beta-ketoacyl synthase, C-terminal domain ARUE_c24910 PF00109 Beta-ketoacyl synthase, N-terminal domain ARUE_c24930 PF00268 Ribonucleotide reductase, small chain ARUE_c24940 PF08343 Ribonucleotide reductase N-terminal ARUE_c24940 PF02867 Ribonucleotide reductase, barrel domain ARUE_c24940 PF00317 Ribonucleotide reductase, all-alpha domain ARUE_c24950 PF07972 NrdI Flavodoxin like ARUE_c24970 PF03466 LysR substrate binding domain ARUE_c24970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c25040 PF17863 AAA lid domain ARUE_c25040 PF07726 ATPase family associated with various cellular activities (AAA) ARUE_c25050 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c25060 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c25070 PF01547 Bacterial extracellular solute-binding protein ARUE_c25080 PF00480 ROK family ARUE_c25090 PF08468 Methyltransferase small domain N-terminal ARUE_c25090 PF05175 Methyltransferase small domain ARUE_c25120 PF00440 Bacterial regulatory proteins, tetR family ARUE_c25160 PF01467 Cytidylyltransferase-like ARUE_c25180 PF00171 Aldehyde dehydrogenase family ARUE_c25190 PF01472 PUA domain ARUE_c25190 PF00696 Amino acid kinase family ARUE_c25200 PF01018 GTP1/OBG ARUE_c25200 PF09269 Domain of unknown function (DUF1967) ARUE_c25200 PF01926 50S ribosome-binding GTPase ARUE_c25210 PF01016 Ribosomal L27 protein ARUE_c25220 PF00829 Ribosomal prokaryotic L21 protein ARUE_c25230 PF03070 TENA/THI-4/PQQC family ARUE_c25230 PF02581 Thiamine monophosphate synthase ARUE_c25230 PF08543 Phosphomethylpyrimidine kinase ARUE_c25240 PF10150 Ribonuclease E/G family ARUE_c25260 PF00334 Nucleoside diphosphate kinase ARUE_c25280 PF02875 Mur ligase family, glutamate ligase domain ARUE_c25280 PF08245 Mur ligase middle domain ARUE_c25290 PF08264 Anticodon-binding domain of tRNA ARUE_c25290 PF00133 tRNA synthetases class I (I, L, M and V) ARUE_c25310 PF00106 short chain dehydrogenase ARUE_c25320 PF08264 Anticodon-binding domain of tRNA ARUE_c25320 PF00133 tRNA synthetases class I (I, L, M and V) ARUE_c25330 PF06827 Zinc finger found in FPG and IleRS ARUE_c25330 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ARUE_c25340 PF01323 DSBA-like thioredoxin domain ARUE_c25350 PF06689 ClpX C4-type zinc finger ARUE_c25350 PF07724 AAA domain (Cdc48 subfamily) ARUE_c25350 PF10431 C-terminal, D2-small domain, of ClpB protein ARUE_c25360 PF00574 Clp protease ARUE_c25370 PF00574 Clp protease ARUE_c25390 PF05697 Bacterial trigger factor protein (TF) ARUE_c25390 PF05698 Bacterial trigger factor protein (TF) C-terminus ARUE_c25390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ARUE_c25420 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ARUE_c25420 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ARUE_c25420 PF06827 Zinc finger found in FPG and IleRS ARUE_c25430 PF02502 Ribose/Galactose Isomerase ARUE_c25440 PF11838 ERAP1-like C-terminal domain ARUE_c25440 PF01433 Peptidase family M1 domain ARUE_c25470 PF00924 Mechanosensitive ion channel ARUE_c25480 PF01152 Bacterial-like globin ARUE_c25510 PF00005 ABC transporter ARUE_c25510 PF12848 ABC transporter ARUE_c25550 PF00436 Single-strand binding protein family ARUE_c25570 PF00557 Metallopeptidase family M24 ARUE_c25600 PF00929 Exonuclease ARUE_c25620 PF01327 Polypeptide deformylase ARUE_c25660 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ARUE_c25660 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ARUE_c25670 PF03883 Peroxide stress protein YaaA ARUE_c25680 PF02591 C4-type zinc ribbon domain ARUE_c25690 PF01784 NIF3 (NGG1p interacting factor 3) ARUE_c25700 PF01625 Peptide methionine sulfoxide reductase ARUE_c25710 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c25720 PF06426 Serine acetyltransferase, N-terminal ARUE_c25720 PF00132 Bacterial transferase hexapeptide (six repeats) ARUE_c25730 PF00106 short chain dehydrogenase ARUE_c25740 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ARUE_c25740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c25750 PF00392 Bacterial regulatory proteins, gntR family ARUE_c25750 PF07729 FCD domain ARUE_c25760 PF00107 Zinc-binding dehydrogenase ARUE_c25760 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c25780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c25780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ARUE_c25790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c25800 PF01757 Acyltransferase family ARUE_c25810 PF00083 Sugar (and other) transporter ARUE_c25810 PF07690 Major Facilitator Superfamily ARUE_c25820 PF01614 Bacterial transcriptional regulator ARUE_c25820 PF09339 IclR helix-turn-helix domain ARUE_c25850 PF02146 Sir2 family ARUE_c25860 PF00578 AhpC/TSA family ARUE_c25870 PF11253 Protein of unknown function (DUF3052) ARUE_c25880 PF00456 Transketolase, thiamine diphosphate binding domain ARUE_c25880 PF17831 Pyruvate dehydrogenase E1 component middle domain ARUE_c25890 PF17853 GGDEF-like domain ARUE_c25890 PF13556 PucR C-terminal helix-turn-helix domain ARUE_c25900 PF00698 Acyl transferase domain ARUE_c25910 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ARUE_c25910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ARUE_c25920 PF00550 Phosphopantetheine attachment site ARUE_c25930 PF02801 Beta-ketoacyl synthase, C-terminal domain ARUE_c25930 PF00109 Beta-ketoacyl synthase, N-terminal domain ARUE_c25950 PF00589 Phage integrase family ARUE_c25950 PF02899 Phage integrase, N-terminal SAM-like domain ARUE_c25970 PF13335 Magnesium chelatase, subunit ChlI C-terminal ARUE_c25970 PF01078 Magnesium chelatase, subunit ChlI ARUE_c25980 PF02021 Uncharacterised protein family UPF0102 ARUE_c25990 PF10611 Protein of unknown function (DUF2469) ARUE_c26000 PF01351 Ribonuclease HII ARUE_c26010 PF10502 Signal peptidase, peptidase S26 ARUE_c26020 PF10502 Signal peptidase, peptidase S26 ARUE_c26030 PF01245 Ribosomal protein L19 ARUE_c26040 PF01746 tRNA (Guanine-1)-methyltransferase ARUE_c26050 PF01782 RimM N-terminal domain ARUE_c26070 PF00886 Ribosomal protein S16 ARUE_c26090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c26100 PF01979 Amidohydrolase family ARUE_c26110 PF01964 Radical SAM ThiC family ARUE_c26110 PF13667 ThiC-associated domain ARUE_c26130 PF00448 SRP54-type protein, GTPase domain ARUE_c26130 PF02881 SRP54-type protein, helical bundle domain ARUE_c26130 PF02978 Signal peptide binding domain ARUE_c26140 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ARUE_c26140 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ARUE_c26150 PF00543 Nitrogen regulatory protein P-II ARUE_c26160 PF00909 Ammonium Transporter Family ARUE_c26170 PF07690 Major Facilitator Superfamily ARUE_c26180 PF00448 SRP54-type protein, GTPase domain ARUE_c26180 PF02881 SRP54-type protein, helical bundle domain ARUE_c26190 PF06470 SMC proteins Flexible Hinge Domain ARUE_c26190 PF02463 RecF/RecN/SMC N terminal domain ARUE_c26240 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ARUE_c26240 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ARUE_c26240 PF06827 Zinc finger found in FPG and IleRS ARUE_c26250 PF14622 Ribonuclease-III-like ARUE_c26250 PF00035 Double-stranded RNA binding motif ARUE_c26260 PF01783 Ribosomal L32p protein family ARUE_c26270 PF02620 Large ribosomal RNA subunit accumulation protein YceD ARUE_c26280 PF01467 Cytidylyltransferase-like ARUE_c26290 PF00155 Aminotransferase class I and II ARUE_c26320 PF00270 DEAD/DEAH box helicase ARUE_c26320 PF00271 Helicase conserved C-terminal domain ARUE_c26320 PF17191 RecG wedge domain ARUE_c26330 PF02734 DAK2 domain ARUE_c26330 PF13684 Dihydroxyacetone kinase family ARUE_c26340 PF02769 AIR synthase related protein, C-terminal domain ARUE_c26340 PF00586 AIR synthase related protein, N-terminal domain ARUE_c26360 PF07478 D-ala D-ala ligase C-terminus ARUE_c26360 PF01820 D-ala D-ala ligase N-terminus ARUE_c26370 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ARUE_c26370 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ARUE_c26390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ARUE_c26400 PF00694 Aconitase C-terminal domain ARUE_c26410 PF00330 Aconitase family (aconitate hydratase) ARUE_c26420 PF01614 Bacterial transcriptional regulator ARUE_c26420 PF09339 IclR helix-turn-helix domain ARUE_c26490 PF00749 tRNA synthetases class I (E and Q), catalytic domain ARUE_c26500 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c26510 PF00753 Metallo-beta-lactamase superfamily ARUE_c26510 PF16123 Hydroxyacylglutathione hydrolase C-terminus ARUE_c26520 PF01063 Amino-transferase class IV ARUE_c26530 PF00180 Isocitrate/isopropylmalate dehydrogenase ARUE_c26540 PF07730 Histidine kinase ARUE_c26550 PF00072 Response regulator receiver domain ARUE_c26550 PF00196 Bacterial regulatory proteins, luxR family ARUE_c26560 PF00005 ABC transporter ARUE_c26560 PF02687 FtsX-like permease family ARUE_c26560 PF12704 MacB-like periplasmic core domain ARUE_c26580 PF08264 Anticodon-binding domain of tRNA ARUE_c26580 PF09334 tRNA synthetases class I (M) ARUE_c26590 PF00005 ABC transporter ARUE_c26590 PF02687 FtsX-like permease family ARUE_c26590 PF12704 MacB-like periplasmic core domain ARUE_c26610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c26610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c26610 PF01842 ACT domain ARUE_c26620 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ARUE_c26620 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ARUE_c26630 PF10369 Small subunit of acetolactate synthase ARUE_c26640 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c26640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c26640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c26650 PF00920 Dehydratase family ARUE_c26660 PF03466 LysR substrate binding domain ARUE_c26660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c26680 PF07995 Glucose / Sorbosone dehydrogenase ARUE_c26720 PF00578 AhpC/TSA family ARUE_c26740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c26750 PF06039 Malate:quinone oxidoreductase (Mqo) ARUE_c26760 PF00873 AcrB/AcrD/AcrF family ARUE_c26770 PF00296 Luciferase-like monooxygenase ARUE_c26780 PF01047 MarR family ARUE_c26790 PF01841 Transglutaminase-like superfamily ARUE_c26790 PF08379 Bacterial transglutaminase-like N-terminal region ARUE_c26840 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c26860 PF00266 Aminotransferase class-V ARUE_c26870 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ARUE_c26870 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ARUE_c26880 PF02910 Fumarate reductase flavoprotein C-term ARUE_c26880 PF00890 FAD binding domain ARUE_c26890 PF02445 Quinolinate synthetase A protein ARUE_c26900 PF00293 NUDIX domain ARUE_c26910 PF01037 Lrp/AsnC ligand binding domain ARUE_c26920 PF00324 Amino acid permease ARUE_c26930 PF00676 Dehydrogenase E1 component ARUE_c26940 PF02780 Transketolase, C-terminal domain ARUE_c26940 PF02779 Transketolase, pyrimidine binding domain ARUE_c26950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ARUE_c26950 PF00364 Biotin-requiring enzyme ARUE_c26950 PF02817 e3 binding domain ARUE_c26980 PF00156 Phosphoribosyl transferase domain ARUE_c26980 PF05139 Erythromycin esterase ARUE_c26990 PF00083 Sugar (and other) transporter ARUE_c26990 PF07690 Major Facilitator Superfamily ARUE_c27000 PF01614 Bacterial transcriptional regulator ARUE_c27000 PF09339 IclR helix-turn-helix domain ARUE_c27010 PF17409 MoaF C-terminal domain ARUE_c27010 PF10703 MoaF N-terminal domain ARUE_c27020 PF13520 Amino acid permease ARUE_c27030 PF14525 AraC-binding-like domain ARUE_c27050 PF00005 ABC transporter ARUE_c27060 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c27070 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c27090 PF01979 Amidohydrolase family ARUE_c27090 PF13382 Adenine deaminase C-terminal domain ARUE_c27120 PF13476 AAA domain ARUE_c27130 PF12320 Type 5 capsule protein repressor C-terminal domain ARUE_c27130 PF00149 Calcineurin-like phosphoesterase ARUE_c27140 PF00230 Major intrinsic protein ARUE_c27150 PF02656 Domain of unknown function (DUF202) ARUE_c27160 PF02656 Domain of unknown function (DUF202) ARUE_c27190 PF14579 Helix-hairpin-helix motif ARUE_c27190 PF02811 PHP domain ARUE_c27190 PF00929 Exonuclease ARUE_c27190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ARUE_c27190 PF07733 Bacterial DNA polymerase III alpha NTPase domain ARUE_c27190 PF11490 DNA polymerase III polC-type N-terminus II ARUE_c27210 PF00005 ABC transporter ARUE_c27230 PF09335 SNARE associated Golgi protein ARUE_c27240 PF01725 Ham1 family ARUE_c27250 PF03725 3' exoribonuclease family, domain 2 ARUE_c27250 PF01138 3' exoribonuclease family, domain 1 ARUE_c27260 PF12706 Beta-lactamase superfamily domain ARUE_c27260 PF00753 Metallo-beta-lactamase superfamily ARUE_c27270 PF01177 Asp/Glu/Hydantoin racemase ARUE_c27290 PF02617 ATP-dependent Clp protease adaptor protein ClpS ARUE_c27300 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ARUE_c27300 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ARUE_c27310 PF00857 Isochorismatase family ARUE_c27320 PF04851 Type III restriction enzyme, res subunit ARUE_c27340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ARUE_c27360 PF00005 ABC transporter ARUE_c27370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ARUE_c27430 PF01939 Endonuclease NucS ARUE_c27440 PF01979 Amidohydrolase family ARUE_c27450 PF00313 'Cold-shock' DNA-binding domain ARUE_c27460 PF09924 Uncharacterised conserved protein (DUF2156) ARUE_c27470 PF00756 Putative esterase ARUE_c27490 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ARUE_c27500 PF02874 ATP synthase alpha/beta family, beta-barrel domain ARUE_c27500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ARUE_c27510 PF00231 ATP synthase ARUE_c27520 PF00306 ATP synthase alpha/beta chain, C terminal domain ARUE_c27520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ARUE_c27520 PF02874 ATP synthase alpha/beta family, beta-barrel domain ARUE_c27530 PF00213 ATP synthase delta (OSCP) subunit ARUE_c27540 PF00430 ATP synthase B/B' CF(0) ARUE_c27550 PF00137 ATP synthase subunit C ARUE_c27560 PF00119 ATP synthase A chain ARUE_c27590 PF00953 Glycosyl transferase family 4 ARUE_c27600 PF00535 Glycosyl transferase family 2 ARUE_c27620 PF01300 Telomere recombination ARUE_c27630 PF17827 PrmC N-terminal domain ARUE_c27630 PF13649 Methyltransferase domain ARUE_c27640 PF03462 PCRF domain ARUE_c27640 PF00472 RF-1 domain ARUE_c27650 PF07498 Rho termination factor, N-terminal domain ARUE_c27650 PF07497 Rho termination factor, RNA-binding domain ARUE_c27650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ARUE_c27660 PF00288 GHMP kinases N terminal domain ARUE_c27670 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c27680 PF00742 Homoserine dehydrogenase ARUE_c27680 PF01842 ACT domain ARUE_c27680 PF03447 Homoserine dehydrogenase, NAD binding domain ARUE_c27690 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ARUE_c27690 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ARUE_c27700 PF05746 DALR anticodon binding domain ARUE_c27700 PF00750 tRNA synthetases class I (R) ARUE_c27700 PF03485 Arginyl tRNA synthetase N terminal domain ARUE_c27730 PF00175 Oxidoreductase NAD-binding domain ARUE_c27730 PF00042 Globin ARUE_c27730 PF00970 Oxidoreductase FAD-binding domain ARUE_c27750 PF01447 Thermolysin metallopeptidase, catalytic domain ARUE_c27750 PF02868 Thermolysin metallopeptidase, alpha-helical domain ARUE_c27750 PF16485 Protealysin propeptide ARUE_c27770 PF01965 DJ-1/PfpI family ARUE_c27800 PF00271 Helicase conserved C-terminal domain ARUE_c27800 PF00270 DEAD/DEAH box helicase ARUE_c27800 PF11898 Domain of unknown function (DUF3418) ARUE_c27800 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ARUE_c27800 PF04408 Helicase associated domain (HA2) ARUE_c27810 PF01230 HIT domain ARUE_c27820 PF00107 Zinc-binding dehydrogenase ARUE_c27820 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c27830 PF00581 Rhodanese-like domain ARUE_c27860 PF01475 Ferric uptake regulator family ARUE_c27870 PF00950 ABC 3 transport family ARUE_c27880 PF00005 ABC transporter ARUE_c27890 PF01297 Zinc-uptake complex component A periplasmic ARUE_c27900 PF01595 Cyclin M transmembrane N-terminal domain ARUE_c27900 PF00571 CBS domain ARUE_c27910 PF01595 Cyclin M transmembrane N-terminal domain ARUE_c27910 PF03471 Transporter associated domain ARUE_c27910 PF00571 CBS domain ARUE_c27920 PF16870 2-oxoglutarate dehydrogenase C-terminal ARUE_c27920 PF00676 Dehydrogenase E1 component ARUE_c27920 PF02779 Transketolase, pyrimidine binding domain ARUE_c27920 PF16078 2-oxoglutarate dehydrogenase N-terminus ARUE_c27920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ARUE_c27940 PF00144 Beta-lactamase ARUE_c27980 PF04542 Sigma-70 region 2 ARUE_c27980 PF08281 Sigma-70, region 4 ARUE_c28000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ARUE_c28010 PF03193 RsgA GTPase ARUE_c28020 PF00459 Inositol monophosphatase family ARUE_c28030 PF00266 Aminotransferase class-V ARUE_c28040 PF08241 Methyltransferase domain ARUE_c28060 PF07690 Major Facilitator Superfamily ARUE_c28080 PF13180 PDZ domain ARUE_c28090 PF01668 SmpB protein ARUE_c28100 PF01551 Peptidase family M23 ARUE_c28110 PF18075 FtsX extracellular domain ARUE_c28110 PF02687 FtsX-like permease family ARUE_c28120 PF00005 ABC transporter ARUE_c28130 PF00472 RF-1 domain ARUE_c28130 PF03462 PCRF domain ARUE_c28200 PF00437 Type II/IV secretion system protein ARUE_c28210 PF01183 Glycosyl hydrolases family 25 ARUE_c28260 PF00535 Glycosyl transferase family 2 ARUE_c28290 PF00005 ABC transporter ARUE_c28290 PF14524 Wzt C-terminal domain ARUE_c28300 PF01061 ABC-2 type transporter ARUE_c28310 PF17994 Galactofuranosyltransferase 2 N-terminal ARUE_c28320 PF03275 UDP-galactopyranose mutase ARUE_c28330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c28330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c28340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ARUE_c28350 PF00132 Bacterial transferase hexapeptide (six repeats) ARUE_c28360 PF01580 FtsK/SpoIIIE family ARUE_c28360 PF12538 DNA transporter ARUE_c28380 PF12282 Signal transduction histidine kinase ARUE_c28380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c28380 PF07568 Histidine kinase ARUE_c28390 PF05088 Bacterial NAD-glutamate dehydrogenase ARUE_c28450 PF07516 SecA Wing and Scaffold domain ARUE_c28450 PF07517 SecA DEAD-like domain ARUE_c28450 PF01043 SecA preprotein cross-linking domain ARUE_c28460 PF06224 Winged helix DNA-binding domain ARUE_c28470 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ARUE_c28470 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ARUE_c28480 PF00156 Phosphoribosyl transferase domain ARUE_c28490 PF10646 Sporulation and spore germination ARUE_c28490 PF10647 Lipoprotein LpqB beta-propeller domain ARUE_c28500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c28500 PF00672 HAMP domain ARUE_c28500 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c28510 PF00072 Response regulator receiver domain ARUE_c28510 PF00486 Transcriptional regulatory protein, C terminal ARUE_c28540 PF14258 Domain of unknown function (DUF4350) ARUE_c28550 PF07726 ATPase family associated with various cellular activities (AAA) ARUE_c28550 PF17863 AAA lid domain ARUE_c28600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c28600 PF00005 ABC transporter ARUE_c28610 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c28610 PF12911 N-terminal TM domain of oligopeptide transport permease C ARUE_c28620 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c28650 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c28650 PF14759 Reductase C-terminal ARUE_c28660 PF00266 Aminotransferase class-V ARUE_c28690 PF00781 Diacylglycerol kinase catalytic domain ARUE_c28700 PF00226 DnaJ domain ARUE_c28700 PF00684 DnaJ central domain ARUE_c28700 PF01556 DnaJ C terminal domain ARUE_c28710 PF00588 SpoU rRNA Methylase family ARUE_c28720 PF04542 Sigma-70 region 2 ARUE_c28720 PF04545 Sigma-70, region 4 ARUE_c28730 PF10099 Anti-sigma-K factor rskA ARUE_c28740 PF02447 GntP family permease ARUE_c28770 PF00766 Electron transfer flavoprotein FAD-binding domain ARUE_c28770 PF01012 Electron transfer flavoprotein domain ARUE_c28780 PF01012 Electron transfer flavoprotein domain ARUE_c28790 PF13180 PDZ domain ARUE_c28800 PF04536 TPM domain ARUE_c28810 PF04012 PspA/IM30 family ARUE_c28820 PF07702 UTRA domain ARUE_c28820 PF00392 Bacterial regulatory proteins, gntR family ARUE_c28850 PF03699 Uncharacterised protein family (UPF0182) ARUE_c28860 PF13180 PDZ domain ARUE_c28860 PF05362 Lon protease (S16) C-terminal proteolytic domain ARUE_c28890 PF00570 HRDC domain ARUE_c28890 PF13361 UvrD-like helicase C-terminal domain ARUE_c28890 PF00580 UvrD/REP helicase N-terminal domain ARUE_c28900 PF09297 NADH pyrophosphatase zinc ribbon domain ARUE_c28900 PF00293 NUDIX domain ARUE_c28900 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ARUE_c28920 PF00580 UvrD/REP helicase N-terminal domain ARUE_c28920 PF13361 UvrD-like helicase C-terminal domain ARUE_c28960 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c28970 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c28980 PF00005 ABC transporter ARUE_c28990 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c29000 PF00202 Aminotransferase class-III ARUE_c29010 PF00296 Luciferase-like monooxygenase ARUE_c29020 PF00490 Delta-aminolevulinic acid dehydratase ARUE_c29040 PF03900 Porphobilinogen deaminase, C-terminal domain ARUE_c29040 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ARUE_c29080 PF01208 Uroporphyrinogen decarboxylase (URO-D) ARUE_c29090 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ARUE_c29090 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ARUE_c29090 PF01488 Shikimate / quinate 5-dehydrogenase ARUE_c29100 PF00899 ThiF family ARUE_c29100 PF00581 Rhodanese-like domain ARUE_c29110 PF00440 Bacterial regulatory proteins, tetR family ARUE_c29140 PF01329 Pterin 4 alpha carbinolamine dehydratase ARUE_c29150 PF05690 Thiazole biosynthesis protein ThiG ARUE_c29170 PF05690 Thiazole biosynthesis protein ThiG ARUE_c29170 PF01266 FAD dependent oxidoreductase ARUE_c29180 PF02581 Thiamine monophosphate synthase ARUE_c29210 PF00773 RNB domain ARUE_c29210 PF00575 S1 RNA binding domain ARUE_c29220 PF00270 DEAD/DEAH box helicase ARUE_c29220 PF00271 Helicase conserved C-terminal domain ARUE_c29230 PF01555 DNA methylase ARUE_c29240 PF01914 MarC family integral membrane protein ARUE_c29260 PF00557 Metallopeptidase family M24 ARUE_c29260 PF05195 Aminopeptidase P, N-terminal domain ARUE_c29280 PF00571 CBS domain ARUE_c29280 PF01769 Divalent cation transporter ARUE_c29280 PF03448 MgtE intracellular N domain ARUE_c29300 PF01883 Iron-sulfur cluster assembly protein ARUE_c29300 PF10609 NUBPL iron-transfer P-loop NTPase ARUE_c29310 PF02416 mttA/Hcf106 family ARUE_c29330 PF08281 Sigma-70, region 4 ARUE_c29330 PF04542 Sigma-70 region 2 ARUE_c29340 PF01596 O-methyltransferase ARUE_c29370 PF03641 Possible lysine decarboxylase ARUE_c29380 PF00005 ABC transporter ARUE_c29390 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c29400 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c29410 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c29420 PF01546 Peptidase family M20/M25/M40 ARUE_c29420 PF07687 Peptidase dimerisation domain ARUE_c29430 PF14602 Hexapeptide repeat of succinyl-transferase ARUE_c29430 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ARUE_c29460 PF13977 BetI-type transcriptional repressor, C-terminal ARUE_c29460 PF00440 Bacterial regulatory proteins, tetR family ARUE_c29470 PF16363 GDP-mannose 4,6 dehydratase ARUE_c29480 PF00285 Citrate synthase, C-terminal domain ARUE_c29490 PF00155 Aminotransferase class I and II ARUE_c29500 PF00037 4Fe-4S binding domain ARUE_c29540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c29540 PF00005 ABC transporter ARUE_c29560 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c29580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c29600 PF06071 Protein of unknown function (DUF933) ARUE_c29600 PF01926 50S ribosome-binding GTPase ARUE_c29610 PF02646 RmuC family ARUE_c29620 PF02401 LytB protein ARUE_c29640 PF13742 OB-fold nucleic acid binding domain ARUE_c29640 PF02601 Exonuclease VII, large subunit ARUE_c29650 PF02609 Exonuclease VII small subunit ARUE_c29660 PF03976 Polyphosphate kinase 2 (PPK2) ARUE_c29700 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c29710 PF00005 ABC transporter ARUE_c29710 PF00571 CBS domain ARUE_c29720 PF03193 RsgA GTPase ARUE_c29750 PF01301 Glycosyl hydrolases family 35 ARUE_c29760 PF02678 Pirin ARUE_c29760 PF05726 Pirin C-terminal cupin domain ARUE_c29770 PF01869 BadF/BadG/BcrA/BcrD ATPase family ARUE_c29790 PF03466 LysR substrate binding domain ARUE_c29790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c29800 PF07690 Major Facilitator Superfamily ARUE_c29810 PF06736 Protein of unknown function (DUF1211) ARUE_c29860 PF01544 CorA-like Mg2+ transporter protein ARUE_c29880 PF00210 Ferritin-like domain ARUE_c29890 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ARUE_c29900 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ARUE_c29920 PF03109 ABC1 family ARUE_c29930 PF03551 Transcriptional regulator PadR-like family ARUE_c30050 PF00483 Nucleotidyl transferase ARUE_c30060 PF01812 5-formyltetrahydrofolate cyclo-ligase family ARUE_c30100 PF02540 NAD synthase ARUE_c30100 PF00117 Glutamine amidotransferase class-I ARUE_c30100 PF00958 GMP synthase C terminal domain ARUE_c30140 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ARUE_c30140 PF01266 FAD dependent oxidoreductase ARUE_c30180 PF00478 IMP dehydrogenase / GMP reductase domain ARUE_c30190 PF00664 ABC transporter transmembrane region ARUE_c30190 PF00005 ABC transporter ARUE_c30200 PF00478 IMP dehydrogenase / GMP reductase domain ARUE_c30200 PF00571 CBS domain ARUE_c30210 PF01757 Acyltransferase family ARUE_c30220 PF01757 Acyltransferase family ARUE_c30250 PF00196 Bacterial regulatory proteins, luxR family ARUE_c30250 PF00072 Response regulator receiver domain ARUE_c30260 PF00118 TCP-1/cpn60 chaperonin family ARUE_c30270 PF00166 Chaperonin 10 Kd subunit ARUE_c30290 PF18096 THUMP domain-like ARUE_c30300 PF08501 Shikimate dehydrogenase substrate binding domain ARUE_c30320 PF04107 Glutamate-cysteine ligase family 2(GCS2) ARUE_c30340 PF00814 Glycoprotease family ARUE_c30350 PF00583 Acetyltransferase (GNAT) family ARUE_c30350 PF13673 Acetyltransferase (GNAT) domain ARUE_c30360 PF00814 Glycoprotease family ARUE_c30370 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ARUE_c30380 PF00842 Alanine racemase, C-terminal domain ARUE_c30380 PF01168 Alanine racemase, N-terminal domain ARUE_c30400 PF02056 Family 4 glycosyl hydrolase ARUE_c30400 PF11975 Family 4 glycosyl hydrolase C-terminal domain ARUE_c30420 PF00534 Glycosyl transferases group 1 ARUE_c30420 PF13439 Glycosyltransferase Family 4 ARUE_c30430 PF01268 Formate--tetrahydrofolate ligase ARUE_c30440 PF01658 Myo-inositol-1-phosphate synthase ARUE_c30450 PF00248 Aldo/keto reductase family ARUE_c30460 PF11941 Domain of unknown function (DUF3459) ARUE_c30460 PF00128 Alpha amylase, catalytic domain ARUE_c30470 PF00128 Alpha amylase, catalytic domain ARUE_c30480 PF00128 Alpha amylase, catalytic domain ARUE_c30480 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ARUE_c30490 PF03853 YjeF-related protein N-terminus ARUE_c30490 PF01256 Carbohydrate kinase ARUE_c30500 PF01648 4'-phosphopantetheinyl transferase superfamily ARUE_c30510 PF01380 SIS domain ARUE_c30520 PF00485 Phosphoribulokinase / Uridine kinase family ARUE_c30540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ARUE_c30540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ARUE_c30540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ARUE_c30540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ARUE_c30550 PF00380 Ribosomal protein S9/S16 ARUE_c30560 PF00572 Ribosomal protein L13 ARUE_c30570 PF01478 Type IV leader peptidase family ARUE_c30570 PF06750 Bacterial Peptidase A24 N-terminal domain ARUE_c30610 PF10609 NUBPL iron-transfer P-loop NTPase ARUE_c30620 PF00437 Type II/IV secretion system protein ARUE_c30650 PF13180 PDZ domain ARUE_c30660 PF01416 tRNA pseudouridine synthase ARUE_c30670 PF01196 Ribosomal protein L17 ARUE_c30680 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ARUE_c30680 PF01000 RNA polymerase Rpb3/RpoA insert domain ARUE_c30680 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ARUE_c30690 PF00411 Ribosomal protein S11 ARUE_c30700 PF00416 Ribosomal protein S13/S18 ARUE_c30710 PF01176 Translation initiation factor 1A / IF-1 ARUE_c30720 PF03576 Peptidase family S58 ARUE_c30730 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c30740 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c30760 PF00557 Metallopeptidase family M24 ARUE_c30780 PF00344 SecY translocase ARUE_c30790 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ARUE_c30800 PF00327 Ribosomal protein L30p/L7e ARUE_c30810 PF03719 Ribosomal protein S5, C-terminal domain ARUE_c30810 PF00333 Ribosomal protein S5, N-terminal domain ARUE_c30820 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ARUE_c30830 PF00347 Ribosomal protein L6 ARUE_c30840 PF00410 Ribosomal protein S8 ARUE_c30850 PF00281 Ribosomal protein L5 ARUE_c30850 PF00673 ribosomal L5P family C-terminus ARUE_c30860 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ARUE_c30870 PF00238 Ribosomal protein L14p/L23e ARUE_c30880 PF00366 Ribosomal protein S17 ARUE_c30890 PF00831 Ribosomal L29 protein ARUE_c30900 PF00252 Ribosomal protein L16p/L10e ARUE_c30910 PF00189 Ribosomal protein S3, C-terminal domain ARUE_c30910 PF07650 KH domain ARUE_c30920 PF00237 Ribosomal protein L22p/L17e ARUE_c30930 PF00203 Ribosomal protein S19 ARUE_c30940 PF00181 Ribosomal Proteins L2, RNA binding domain ARUE_c30940 PF03947 Ribosomal Proteins L2, C-terminal domain ARUE_c30950 PF00276 Ribosomal protein L23 ARUE_c30960 PF00573 Ribosomal protein L4/L1 family ARUE_c30970 PF00297 Ribosomal protein L3 ARUE_c30980 PF00338 Ribosomal protein S10p/S20e ARUE_c30990 PF00232 Glycosyl hydrolase family 1 ARUE_c31010 PF03144 Elongation factor Tu domain 2 ARUE_c31010 PF03143 Elongation factor Tu C-terminal domain ARUE_c31010 PF00009 Elongation factor Tu GTP binding domain ARUE_c31020 PF00009 Elongation factor Tu GTP binding domain ARUE_c31020 PF03764 Elongation factor G, domain IV ARUE_c31020 PF14492 Elongation Factor G, domain II ARUE_c31020 PF00679 Elongation factor G C-terminus ARUE_c31020 PF03144 Elongation factor Tu domain 2 ARUE_c31030 PF00177 Ribosomal protein S7p/S5e ARUE_c31040 PF00164 Ribosomal protein S12/S23 ARUE_c31050 PF05000 RNA polymerase Rpb1, domain 4 ARUE_c31050 PF04998 RNA polymerase Rpb1, domain 5 ARUE_c31050 PF00623 RNA polymerase Rpb1, domain 2 ARUE_c31050 PF04997 RNA polymerase Rpb1, domain 1 ARUE_c31050 PF04983 RNA polymerase Rpb1, domain 3 ARUE_c31060 PF04563 RNA polymerase beta subunit ARUE_c31060 PF00562 RNA polymerase Rpb2, domain 6 ARUE_c31060 PF10385 RNA polymerase beta subunit external 1 domain ARUE_c31060 PF04561 RNA polymerase Rpb2, domain 2 ARUE_c31060 PF04565 RNA polymerase Rpb2, domain 3 ARUE_c31060 PF04560 RNA polymerase Rpb2, domain 7 ARUE_c31070 PF00108 Thiolase, N-terminal domain ARUE_c31070 PF02803 Thiolase, C-terminal domain ARUE_c31080 PF03129 Anticodon binding domain ARUE_c31080 PF04073 Aminoacyl-tRNA editing domain ARUE_c31080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ARUE_c31090 PF16320 Ribosomal protein L7/L12 dimerisation domain ARUE_c31090 PF00542 Ribosomal protein L7/L12 C-terminal domain ARUE_c31100 PF00466 Ribosomal protein L10 ARUE_c31130 PF00687 Ribosomal protein L1p/L10e family ARUE_c31140 PF00298 Ribosomal protein L11, RNA binding domain ARUE_c31140 PF03946 Ribosomal protein L11, N-terminal domain ARUE_c31150 PF02357 Transcription termination factor nusG ARUE_c31160 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ARUE_c31180 PF00155 Aminotransferase class I and II ARUE_c31190 PF00072 Response regulator receiver domain ARUE_c31190 PF00196 Bacterial regulatory proteins, luxR family ARUE_c31240 PF00365 Phosphofructokinase ARUE_c31260 PF07690 Major Facilitator Superfamily ARUE_c31290 PF08669 Glycine cleavage T-protein C-terminal barrel domain ARUE_c31290 PF01571 Aminomethyltransferase folate-binding domain ARUE_c31300 PF03358 NADPH-dependent FMN reductase ARUE_c31300 PF01566 Natural resistance-associated macrophage protein ARUE_c31310 PF08768 Domain of unknown function (DUF1794) ARUE_c31330 PF00486 Transcriptional regulatory protein, C terminal ARUE_c31340 PF00583 Acetyltransferase (GNAT) family ARUE_c31350 PF02503 Polyphosphate kinase middle domain ARUE_c31350 PF17941 Polyphosphate kinase C-terminal domain 1 ARUE_c31350 PF13089 Polyphosphate kinase N-terminal domain ARUE_c31350 PF13090 Polyphosphate kinase C-terminal domain 2 ARUE_c31360 PF00293 NUDIX domain ARUE_c31360 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c31400 PF00303 Thymidylate synthase ARUE_c31410 PF00186 Dihydrofolate reductase ARUE_c31430 PF01118 Semialdehyde dehydrogenase, NAD binding domain ARUE_c31430 PF02774 Semialdehyde dehydrogenase, dimerisation domain ARUE_c31470 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ARUE_c31470 PF01565 FAD binding domain ARUE_c31480 PF07690 Major Facilitator Superfamily ARUE_c31490 PF01575 MaoC like domain ARUE_c31500 PF13452 N-terminal half of MaoC dehydratase ARUE_c31550 PF00005 ABC transporter ARUE_c31560 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c31570 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ARUE_c31580 PF00248 Aldo/keto reductase family ARUE_c31590 PF00128 Alpha amylase, catalytic domain ARUE_c31630 PF00480 ROK family ARUE_c31640 PF00999 Sodium/hydrogen exchanger family ARUE_c31680 PF04972 BON domain ARUE_c31680 PF01476 LysM domain ARUE_c31690 PF00270 DEAD/DEAH box helicase ARUE_c31690 PF00271 Helicase conserved C-terminal domain ARUE_c31690 PF03880 DbpA RNA binding domain ARUE_c31720 PF00072 Response regulator receiver domain ARUE_c31720 PF00486 Transcriptional regulatory protein, C terminal ARUE_c31730 PF02702 Osmosensitive K+ channel His kinase sensor domain ARUE_c31730 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c31730 PF13493 Domain of unknown function (DUF4118) ARUE_c31730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c31730 PF00582 Universal stress protein family ARUE_c31750 PF03738 Glutathionylspermidine synthase preATP-grasp ARUE_c31760 PF13520 Amino acid permease ARUE_c31770 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c31770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c31770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c31800 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c31810 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c31820 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ARUE_c31820 PF02929 Beta galactosidase small chain ARUE_c31820 PF16353 Domain of unknown function(DUF4981) ARUE_c31820 PF02837 Glycosyl hydrolases family 2, sugar binding domain ARUE_c31840 PF01638 HxlR-like helix-turn-helix ARUE_c31850 PF05506 Domain of unknown function (DUF756) ARUE_c31850 PF04185 Phosphoesterase family ARUE_c31860 PF01053 Cys/Met metabolism PLP-dependent enzyme ARUE_c31870 PF00571 CBS domain ARUE_c31870 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c31900 PF00005 ABC transporter ARUE_c31900 PF13732 Domain of unknown function (DUF4162) ARUE_c31920 PF00501 AMP-binding enzyme ARUE_c31920 PF13193 AMP-binding enzyme C-terminal domain ARUE_c31940 PF00085 Thioredoxin ARUE_c31960 PF00005 ABC transporter ARUE_c31960 PF13732 Domain of unknown function (DUF4162) ARUE_c32000 PF07885 Ion channel ARUE_c32030 PF04461 Protein of unknown function (DUF520) ARUE_c32040 PF01435 Peptidase family M48 ARUE_c32070 PF01475 Ferric uptake regulator family ARUE_c32080 PF06628 Catalase-related immune-responsive ARUE_c32080 PF00199 Catalase ARUE_c32100 PF13520 Amino acid permease ARUE_c32120 PF00107 Zinc-binding dehydrogenase ARUE_c32120 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c32130 PF00171 Aldehyde dehydrogenase family ARUE_c32150 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c32160 PF00892 EamA-like transporter family ARUE_c32170 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ARUE_c32170 PF02278 Polysaccharide lyase family 8, super-sandwich domain ARUE_c32170 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain ARUE_c32180 PF00202 Aminotransferase class-III ARUE_c32190 PF00171 Aldehyde dehydrogenase family ARUE_c32200 PF05651 Putative sugar diacid recognition ARUE_c32200 PF17853 GGDEF-like domain ARUE_c32200 PF13556 PucR C-terminal helix-turn-helix domain ARUE_c32210 PF07690 Major Facilitator Superfamily ARUE_c32220 PF07729 FCD domain ARUE_c32220 PF00392 Bacterial regulatory proteins, gntR family ARUE_c32230 PF00753 Metallo-beta-lactamase superfamily ARUE_c32230 PF00581 Rhodanese-like domain ARUE_c32240 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c32250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ARUE_c32250 PF10414 Sirohaem synthase dimerisation region ARUE_c32250 PF14824 Sirohaem biosynthesis protein central ARUE_c32270 PF04960 Glutaminase ARUE_c32290 PF00296 Luciferase-like monooxygenase ARUE_c32340 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c32350 PF00005 ABC transporter ARUE_c32370 PF02574 Homocysteine S-methyltransferase ARUE_c32380 PF00009 Elongation factor Tu GTP binding domain ARUE_c32390 PF01507 Phosphoadenosine phosphosulfate reductase family ARUE_c32400 PF01507 Phosphoadenosine phosphosulfate reductase family ARUE_c32410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ARUE_c32410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ARUE_c32500 PF03458 UPF0126 domain ARUE_c32530 PF00348 Polyprenyl synthetase ARUE_c32540 PF01494 FAD binding domain ARUE_c32550 PF01209 ubiE/COQ5 methyltransferase family ARUE_c32560 PF00425 chorismate binding enzyme ARUE_c32570 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c32580 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c32590 PF00005 ABC transporter ARUE_c32600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c32630 PF18374 Enolase N-terminal domain-like ARUE_c32630 PF13378 Enolase C-terminal domain-like ARUE_c32670 PF00356 Bacterial regulatory proteins, lacI family ARUE_c32680 PF08244 Glycosyl hydrolases family 32 C terminal ARUE_c32680 PF00251 Glycosyl hydrolases family 32 N-terminal domain ARUE_c32690 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c32700 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c32750 PF00082 Subtilase family ARUE_c32750 PF04151 Bacterial pre-peptidase C-terminal domain ARUE_c32860 PF00571 CBS domain ARUE_c32860 PF01595 Cyclin M transmembrane N-terminal domain ARUE_c32860 PF03471 Transporter associated domain ARUE_c32870 PF00571 CBS domain ARUE_c32870 PF01595 Cyclin M transmembrane N-terminal domain ARUE_c32890 PF00082 Subtilase family ARUE_c32890 PF04151 Bacterial pre-peptidase C-terminal domain ARUE_c32920 PF07883 Cupin domain ARUE_c32960 PF01638 HxlR-like helix-turn-helix ARUE_c32980 PF02817 e3 binding domain ARUE_c32980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ARUE_c32980 PF00364 Biotin-requiring enzyme ARUE_c32990 PF02780 Transketolase, C-terminal domain ARUE_c32990 PF02779 Transketolase, pyrimidine binding domain ARUE_c33000 PF00676 Dehydrogenase E1 component ARUE_c33050 PF13614 AAA domain ARUE_c33110 PF03808 Glycosyl transferase WecB/TagA/CpsF family ARUE_c33120 PF16363 GDP-mannose 4,6 dehydratase ARUE_c33130 PF01370 NAD dependent epimerase/dehydratase family ARUE_c33140 PF02397 Bacterial sugar transferase ARUE_c33150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ARUE_c33150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ARUE_c33150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ARUE_c33190 PF00483 Nucleotidyl transferase ARUE_c33220 PF01757 Acyltransferase family ARUE_c33240 PF00561 alpha/beta hydrolase fold ARUE_c33260 PF00487 Fatty acid desaturase ARUE_c33270 PF00970 Oxidoreductase FAD-binding domain ARUE_c33270 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_c33270 PF00175 Oxidoreductase NAD-binding domain ARUE_c33280 PF00561 alpha/beta hydrolase fold ARUE_c33450 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ARUE_c33560 PF02839 Carbohydrate binding domain ARUE_c33590 PF00378 Enoyl-CoA hydratase/isomerase ARUE_c33600 PF00175 Oxidoreductase NAD-binding domain ARUE_c33600 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_c33600 PF00970 Oxidoreductase FAD-binding domain ARUE_c33610 PF01883 Iron-sulfur cluster assembly protein ARUE_c33620 PF05138 Phenylacetic acid catabolic protein ARUE_c33630 PF06243 Phenylacetic acid degradation B ARUE_c33640 PF05138 Phenylacetic acid catabolic protein ARUE_c33650 PF01451 Low molecular weight phosphotyrosine protein phosphatase ARUE_c33660 PF05257 CHAP domain ARUE_c33660 PF01476 LysM domain ARUE_c33670 PF03816 Cell envelope-related transcriptional attenuator domain ARUE_c33680 PF10502 Signal peptidase, peptidase S26 ARUE_c33710 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c33710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c33710 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ARUE_c33710 PF00072 Response regulator receiver domain ARUE_c33710 PF01627 Hpt domain ARUE_c33710 PF00672 HAMP domain ARUE_c33720 PF00990 Diguanylate cyclase, GGDEF domain ARUE_c33730 PF00326 Prolyl oligopeptidase family ARUE_c33730 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ARUE_c33740 PF13649 Methyltransferase domain ARUE_c33760 PF00672 HAMP domain ARUE_c33760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c33760 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c33760 PF18698 Histidine kinase sensor domain ARUE_c33760 PF00989 PAS fold ARUE_c33780 PF03707 Bacterial signalling protein N terminal repeat ARUE_c33780 PF00990 Diguanylate cyclase, GGDEF domain ARUE_c33780 PF00563 EAL domain ARUE_c33800 PF03061 Thioesterase superfamily ARUE_c33810 PF14535 AMP-binding enzyme C-terminal domain ARUE_c33810 PF00501 AMP-binding enzyme ARUE_c33830 PF00171 Aldehyde dehydrogenase family ARUE_c33830 PF01575 MaoC like domain ARUE_c33860 PF00535 Glycosyl transferase family 2 ARUE_c33870 PF13350 Tyrosine phosphatase family ARUE_c33880 PF00356 Bacterial regulatory proteins, lacI family ARUE_c33890 PF13416 Bacterial extracellular solute-binding protein ARUE_c33900 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c33930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c33930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c33940 PF13472 GDSL-like Lipase/Acylhydrolase family ARUE_c33960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ARUE_c33960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ARUE_c33970 PF00378 Enoyl-CoA hydratase/isomerase ARUE_c33980 PF02803 Thiolase, C-terminal domain ARUE_c33980 PF00108 Thiolase, N-terminal domain ARUE_c34010 PF00324 Amino acid permease ARUE_c34020 PF00355 Rieske [2Fe-2S] domain ARUE_c34030 PF18267 Rubredoxin NAD+ reductase C-terminal domain ARUE_c34030 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c34030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ARUE_c34030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ARUE_c34030 PF04324 BFD-like [2Fe-2S] binding domain ARUE_c34050 PF00005 ABC transporter ARUE_c34080 PF00950 ABC 3 transport family ARUE_c34090 PF00005 ABC transporter ARUE_c34100 PF01297 Zinc-uptake complex component A periplasmic ARUE_c34110 PF02517 CPBP intramembrane metalloprotease ARUE_c34130 PF00378 Enoyl-CoA hydratase/isomerase ARUE_c34140 PF00501 AMP-binding enzyme ARUE_c34140 PF13193 AMP-binding enzyme C-terminal domain ARUE_c34150 PF01040 UbiA prenyltransferase family ARUE_c34190 PF00350 Dynamin family ARUE_c34200 PF00350 Dynamin family ARUE_c34240 PF00012 Hsp70 protein ARUE_c34250 PF01578 Cytochrome C assembly protein ARUE_c34260 PF05140 ResB-like family ARUE_c34270 PF02683 Cytochrome C biogenesis protein transmembrane region ARUE_c34280 PF00578 AhpC/TSA family ARUE_c34290 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c34300 PF04264 YceI-like domain ARUE_c34330 PF02629 CoA binding domain ARUE_c34330 PF06971 Putative DNA-binding protein N-terminus ARUE_c34370 PF12728 Helix-turn-helix domain ARUE_c34380 PF00793 DAHP synthetase I family ARUE_c34390 PF05448 Acetyl xylan esterase (AXE1) ARUE_c34410 PF07690 Major Facilitator Superfamily ARUE_c34430 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c34440 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c34460 PF02449 Beta-galactosidase ARUE_c34460 PF08533 Beta-galactosidase C-terminal domain ARUE_c34460 PF08532 Beta-galactosidase trimerisation domain ARUE_c34480 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c34490 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c34510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c34530 PF00171 Aldehyde dehydrogenase family ARUE_c34540 PF13378 Enolase C-terminal domain-like ARUE_c34540 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ARUE_c34550 PF00701 Dihydrodipicolinate synthetase family ARUE_c34570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c34570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c34580 PF00356 Bacterial regulatory proteins, lacI family ARUE_c34590 PF07729 FCD domain ARUE_c34590 PF00392 Bacterial regulatory proteins, gntR family ARUE_c34600 PF01070 FMN-dependent dehydrogenase ARUE_c34610 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ARUE_c34610 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ARUE_c34620 PF01022 Bacterial regulatory protein, arsR family ARUE_c34630 PF00850 Histone deacetylase domain ARUE_c34640 PF02386 Cation transport protein ARUE_c34650 PF02254 TrkA-N domain ARUE_c34650 PF02080 TrkA-C domain ARUE_c34660 PF03807 NADP oxidoreductase coenzyme F420-dependent ARUE_c34660 PF14748 Pyrroline-5-carboxylate reductase dimerisation ARUE_c34680 PF01261 Xylose isomerase-like TIM barrel ARUE_c34690 PF02541 Ppx/GppA phosphatase family ARUE_c34710 PF13368 Topoisomerase C-terminal repeat ARUE_c34710 PF01751 Toprim domain ARUE_c34710 PF01131 DNA topoisomerase ARUE_c34730 PF05175 Methyltransferase small domain ARUE_c34780 PF09369 Domain of unknown function (DUF1998) ARUE_c34780 PF00270 DEAD/DEAH box helicase ARUE_c34780 PF00271 Helicase conserved C-terminal domain ARUE_c34840 PF00437 Type II/IV secretion system protein ARUE_c34860 PF00476 DNA polymerase family A ARUE_c34860 PF01612 3'-5' exonuclease ARUE_c34860 PF01367 5'-3' exonuclease, C-terminal SAM fold ARUE_c34860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ARUE_c34880 PF00293 NUDIX domain ARUE_c34890 PF10576 Iron-sulfur binding domain of endonuclease III ARUE_c34890 PF00633 Helix-hairpin-helix motif ARUE_c34890 PF00730 HhH-GPD superfamily base excision DNA repair protein ARUE_c34910 PF00501 AMP-binding enzyme ARUE_c34910 PF13193 AMP-binding enzyme C-terminal domain ARUE_c34910 PF16177 Acetyl-coenzyme A synthetase N-terminus ARUE_c34920 PF00455 DeoR C terminal sensor domain ARUE_c34920 PF08220 DeoR-like helix-turn-helix domain ARUE_c34930 PF00005 ABC transporter ARUE_c34930 PF02687 FtsX-like permease family ARUE_c34930 PF12704 MacB-like periplasmic core domain ARUE_c34950 PF00356 Bacterial regulatory proteins, lacI family ARUE_c34970 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c34980 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c35000 PF16875 Glycosyl hydrolase family 36 N-terminal domain ARUE_c35000 PF16874 Glycosyl hydrolase family 36 C-terminal domain ARUE_c35010 PF01220 Dehydroquinase class II ARUE_c35020 PF02674 Colicin V production protein ARUE_c35030 PF00027 Cyclic nucleotide-binding domain ARUE_c35030 PF13545 Crp-like helix-turn-helix domain ARUE_c35070 PF00912 Transglycosylase ARUE_c35070 PF00905 Penicillin binding protein transpeptidase domain ARUE_c35080 PF00149 Calcineurin-like phosphoesterase ARUE_c35090 PF03176 MMPL family ARUE_c35100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ARUE_c35100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ARUE_c35110 PF01494 FAD binding domain ARUE_c35130 PF00248 Aldo/keto reductase family ARUE_c35140 PF00005 ABC transporter ARUE_c35140 PF00664 ABC transporter transmembrane region ARUE_c35150 PF00005 ABC transporter ARUE_c35150 PF00664 ABC transporter transmembrane region ARUE_c35180 PF01259 SAICAR synthetase ARUE_c35190 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ARUE_c35190 PF02844 Phosphoribosylglycinamide synthetase, N domain ARUE_c35190 PF02843 Phosphoribosylglycinamide synthetase, C domain ARUE_c35220 PF00375 Sodium:dicarboxylate symporter family ARUE_c35240 PF01177 Asp/Glu/Hydantoin racemase ARUE_c35250 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ARUE_c35260 PF17831 Pyruvate dehydrogenase E1 component middle domain ARUE_c35260 PF00456 Transketolase, thiamine diphosphate binding domain ARUE_c35280 PF12804 MobA-like NTP transferase domain ARUE_c35290 PF00583 Acetyltransferase (GNAT) family ARUE_c35300 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ARUE_c35300 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ARUE_c35320 PF13478 XdhC Rossmann domain ARUE_c35320 PF02625 XdhC and CoxI family ARUE_c35330 PF00860 Permease family ARUE_c35340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ARUE_c35350 PF01979 Amidohydrolase family ARUE_c35390 PF01014 Uricase ARUE_c35400 PF00860 Permease family ARUE_c35420 PF09339 IclR helix-turn-helix domain ARUE_c35420 PF01614 Bacterial transcriptional regulator ARUE_c35430 PF03949 Malic enzyme, NAD binding domain ARUE_c35430 PF00390 Malic enzyme, N-terminal domain ARUE_c35460 PF07883 Cupin domain ARUE_c35460 PF05899 Protein of unknown function (DUF861) ARUE_c35490 PF04978 Protein of unknown function (DUF664) ARUE_c35500 PF07690 Major Facilitator Superfamily ARUE_c35530 PF00912 Transglycosylase ARUE_c35530 PF00905 Penicillin binding protein transpeptidase domain ARUE_c35560 PF00909 Ammonium Transporter Family ARUE_c35580 PF01740 STAS domain ARUE_c35580 PF00916 Sulfate permease family ARUE_c35670 PF07690 Major Facilitator Superfamily ARUE_c35690 PF01979 Amidohydrolase family ARUE_c35710 PF01839 FG-GAP repeat ARUE_c35710 PF18370 Rhamnogalacturonan I lyases beta-sheet domain ARUE_c35780 PF00561 alpha/beta hydrolase fold ARUE_c35820 PF00664 ABC transporter transmembrane region ARUE_c35820 PF00005 ABC transporter ARUE_c35830 PF00664 ABC transporter transmembrane region ARUE_c35830 PF00005 ABC transporter ARUE_c35840 PF02525 Flavodoxin-like fold ARUE_c35850 PF01638 HxlR-like helix-turn-helix ARUE_c35860 PF00561 alpha/beta hydrolase fold ARUE_c35870 PF05235 CHAD domain ARUE_c35870 PF01928 CYTH domain ARUE_c35880 PF03364 Polyketide cyclase / dehydrase and lipid transport ARUE_c35920 PF02515 CoA-transferase family III ARUE_c35930 PF00378 Enoyl-CoA hydratase/isomerase ARUE_c36030 PF00005 ABC transporter ARUE_c36080 PF00465 Iron-containing alcohol dehydrogenase ARUE_c36090 PF00202 Aminotransferase class-III ARUE_c36140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c36140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c36150 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c36160 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c36170 PF01547 Bacterial extracellular solute-binding protein ARUE_c36180 PF00356 Bacterial regulatory proteins, lacI family ARUE_c36320 PF01261 Xylose isomerase-like TIM barrel ARUE_c36330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ARUE_c36330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c36340 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c36340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c36340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c36350 PF02595 Glycerate kinase family ARUE_c36360 PF01979 Amidohydrolase family ARUE_c36370 PF00486 Transcriptional regulatory protein, C terminal ARUE_c36370 PF00072 Response regulator receiver domain ARUE_c36380 PF00578 AhpC/TSA family ARUE_c36390 PF00486 Transcriptional regulatory protein, C terminal ARUE_c36390 PF00072 Response regulator receiver domain ARUE_c36400 PF07238 PilZ domain ARUE_c36400 PF00535 Glycosyl transferase family 2 ARUE_c36400 PF03552 Cellulose synthase ARUE_c36410 PF01740 STAS domain ARUE_c36440 PF00266 Aminotransferase class-V ARUE_c36450 PF07690 Major Facilitator Superfamily ARUE_c36470 PF01569 PAP2 superfamily ARUE_c36490 PF00576 HIUase/Transthyretin family ARUE_c36510 PF00156 Phosphoribosyl transferase domain ARUE_c36520 PF02769 AIR synthase related protein, C-terminal domain ARUE_c36520 PF00586 AIR synthase related protein, N-terminal domain ARUE_c36570 PF10431 C-terminal, D2-small domain, of ClpB protein ARUE_c36570 PF07724 AAA domain (Cdc48 subfamily) ARUE_c36570 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c36570 PF17871 AAA lid domain ARUE_c36570 PF02861 Clp amino terminal domain, pathogenicity island component ARUE_c36590 PF03459 TOBE domain ARUE_c36590 PF00005 ABC transporter ARUE_c36600 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c36620 PF03459 TOBE domain ARUE_c36630 PF01565 FAD binding domain ARUE_c36630 PF08031 Berberine and berberine like ARUE_c36650 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase ARUE_c36650 PF00754 F5/8 type C domain ARUE_c36650 PF13088 BNR repeat-like domain ARUE_c36660 PF03733 Inner membrane component domain ARUE_c36680 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ARUE_c36690 PF05962 HutD ARUE_c36700 PF00893 Small Multidrug Resistance protein ARUE_c36710 PF00893 Small Multidrug Resistance protein ARUE_c36720 PF00248 Aldo/keto reductase family ARUE_c36730 PF00753 Metallo-beta-lactamase superfamily ARUE_c36730 PF16123 Hydroxyacylglutathione hydrolase C-terminus ARUE_c36740 PF00271 Helicase conserved C-terminal domain ARUE_c36740 PF00270 DEAD/DEAH box helicase ARUE_c36760 PF00376 MerR family regulatory protein ARUE_c36760 PF09278 MerR, DNA binding ARUE_c36770 PF03848 Tellurite resistance protein TehB ARUE_c36800 PF00083 Sugar (and other) transporter ARUE_c36810 PF07690 Major Facilitator Superfamily ARUE_c36830 PF02390 Putative methyltransferase ARUE_c36870 PF04545 Sigma-70, region 4 ARUE_c36870 PF04542 Sigma-70 region 2 ARUE_c36920 PF00005 ABC transporter ARUE_c36960 PF00271 Helicase conserved C-terminal domain ARUE_c36960 PF00176 SNF2 family N-terminal domain ARUE_c36960 PF12419 SNF2 Helicase protein ARUE_c36990 PF00392 Bacterial regulatory proteins, gntR family ARUE_c36990 PF07702 UTRA domain ARUE_c37020 PF01425 Amidase ARUE_c37030 PF04371 Porphyromonas-type peptidyl-arginine deiminase ARUE_c37100 PF01614 Bacterial transcriptional regulator ARUE_c37100 PF09339 IclR helix-turn-helix domain ARUE_c37110 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c37110 PF00107 Zinc-binding dehydrogenase ARUE_c37120 PF00456 Transketolase, thiamine diphosphate binding domain ARUE_c37130 PF02779 Transketolase, pyrimidine binding domain ARUE_c37130 PF02780 Transketolase, C-terminal domain ARUE_c37140 PF00294 pfkB family carbohydrate kinase ARUE_c37160 PF00107 Zinc-binding dehydrogenase ARUE_c37160 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c37170 PF00083 Sugar (and other) transporter ARUE_c37180 PF00106 short chain dehydrogenase ARUE_c37190 PF13411 MerR HTH family regulatory protein ARUE_c37200 PF01556 DnaJ C terminal domain ARUE_c37200 PF00226 DnaJ domain ARUE_c37200 PF00684 DnaJ central domain ARUE_c37210 PF01025 GrpE ARUE_c37220 PF00012 Hsp70 protein ARUE_c37240 PF05675 Protein of unknown function (DUF817) ARUE_c37260 PF13305 Tetracyclin repressor-like, C-terminal domain ARUE_c37260 PF00440 Bacterial regulatory proteins, tetR family ARUE_c37290 PF12833 Helix-turn-helix domain ARUE_c37290 PF02311 AraC-like ligand binding domain ARUE_c37310 PF00480 ROK family ARUE_c37320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c37320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c37350 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c37360 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c37380 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ARUE_c37420 PF00356 Bacterial regulatory proteins, lacI family ARUE_c37440 PF01547 Bacterial extracellular solute-binding protein ARUE_c37450 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c37460 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c37470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c37470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c37500 PF09423 PhoD-like phosphatase ARUE_c37500 PF16655 PhoD-like phosphatase, N-terminal domain ARUE_c37530 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c37530 PF00107 Zinc-binding dehydrogenase ARUE_c37570 PF02728 Copper amine oxidase, N3 domain ARUE_c37570 PF01179 Copper amine oxidase, enzyme domain ARUE_c37580 PF00440 Bacterial regulatory proteins, tetR family ARUE_c37580 PF13977 BetI-type transcriptional repressor, C-terminal ARUE_c37590 PF01810 LysE type translocator ARUE_c37600 PF00171 Aldehyde dehydrogenase family ARUE_c37610 PF01842 ACT domain ARUE_c37610 PF01817 Chorismate mutase type II ARUE_c37610 PF00800 Prephenate dehydratase ARUE_c37620 PF01451 Low molecular weight phosphotyrosine protein phosphatase ARUE_c37630 PF01451 Low molecular weight phosphotyrosine protein phosphatase ARUE_c37660 PF01451 Low molecular weight phosphotyrosine protein phosphatase ARUE_c37670 PF01451 Low molecular weight phosphotyrosine protein phosphatase ARUE_c37700 PF01022 Bacterial regulatory protein, arsR family ARUE_c37720 PF03176 MMPL family ARUE_c37750 PF03795 YCII-related domain ARUE_c37760 PF04542 Sigma-70 region 2 ARUE_c37760 PF08281 Sigma-70, region 4 ARUE_c37770 PF00248 Aldo/keto reductase family ARUE_c37780 PF11799 impB/mucB/samB family C-terminal domain ARUE_c37780 PF00817 impB/mucB/samB family ARUE_c37790 PF01810 LysE type translocator ARUE_c37810 PF00356 Bacterial regulatory proteins, lacI family ARUE_c37820 PF01156 Inosine-uridine preferring nucleoside hydrolase ARUE_c37830 PF07690 Major Facilitator Superfamily ARUE_c37840 PF00294 pfkB family carbohydrate kinase ARUE_c37860 PF00440 Bacterial regulatory proteins, tetR family ARUE_c37860 PF17926 Tetracyclin repressor-like, C-terminal domain ARUE_c37870 PF01451 Low molecular weight phosphotyrosine protein phosphatase ARUE_c37880 PF04715 Anthranilate synthase component I, N terminal region ARUE_c37880 PF00425 chorismate binding enzyme ARUE_c37880 PF00117 Glutamine amidotransferase class-I ARUE_c37890 PF13091 PLD-like domain ARUE_c37890 PF13396 Phospholipase_D-nuclease N-terminal ARUE_c37910 PF00324 Amino acid permease ARUE_c37920 PF02627 Carboxymuconolactone decarboxylase family ARUE_c37930 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c37930 PF00571 CBS domain ARUE_c37940 PF00221 Aromatic amino acid lyase ARUE_c37950 PF00296 Luciferase-like monooxygenase ARUE_c37960 PF01740 STAS domain ARUE_c37960 PF00916 Sulfate permease family ARUE_c37980 PF00581 Rhodanese-like domain ARUE_c37990 PF01053 Cys/Met metabolism PLP-dependent enzyme ARUE_c38010 PF04107 Glutamate-cysteine ligase family 2(GCS2) ARUE_c38020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ARUE_c38030 PF00005 ABC transporter ARUE_c38030 PF08021 Siderophore-interacting FAD-binding domain ARUE_c38030 PF00664 ABC transporter transmembrane region ARUE_c38030 PF04954 Siderophore-interacting protein ARUE_c38040 PF01804 Penicillin amidase ARUE_c38070 PF00005 ABC transporter ARUE_c38080 PF09819 ABC-type cobalt transport system, permease component ARUE_c38110 PF03334 Na+/H+ antiporter subunit ARUE_c38150 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ARUE_c38150 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ARUE_c38150 PF00361 Proton-conducting membrane transporter ARUE_c38150 PF13244 Domain of unknown function (DUF4040) ARUE_c38170 PF02080 TrkA-C domain ARUE_c38170 PF03600 Citrate transporter ARUE_c38180 PF00999 Sodium/hydrogen exchanger family ARUE_c38200 PF00692 dUTPase ARUE_c38230 PF02557 D-alanyl-D-alanine carboxypeptidase ARUE_c38260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ARUE_c38260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ARUE_c38270 PF05977 Transmembrane secretion effector ARUE_c38280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c38280 PF03466 LysR substrate binding domain ARUE_c38310 PF07859 alpha/beta hydrolase fold ARUE_c38310 PF13472 GDSL-like Lipase/Acylhydrolase family ARUE_c38320 PF00356 Bacterial regulatory proteins, lacI family ARUE_c38330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c38330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c38370 PF03631 Virulence factor BrkB ARUE_c38380 PF00480 ROK family ARUE_c38390 PF01261 Xylose isomerase-like TIM barrel ARUE_c38400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ARUE_c38400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ARUE_c38410 PF00356 Bacterial regulatory proteins, lacI family ARUE_c38420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ARUE_c38420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ARUE_c38430 PF00596 Class II Aldolase and Adducin N-terminal domain ARUE_c38440 PF02610 L-arabinose isomerase ARUE_c38440 PF11762 L-arabinose isomerase C-terminal domain ARUE_c38450 PF01263 Aldose 1-epimerase ARUE_c38470 PF05336 L-rhamnose mutarotase ARUE_c38490 PF00596 Class II Aldolase and Adducin N-terminal domain ARUE_c38500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ARUE_c38500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ARUE_c38530 PF02261 Aspartate decarboxylase ARUE_c38550 PF00723 Glycosyl hydrolases family 15 ARUE_c38560 PF00296 Luciferase-like monooxygenase ARUE_c38570 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c38580 PF13291 ACT domain ARUE_c38580 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c38620 PF00296 Luciferase-like monooxygenase ARUE_c38670 PF00005 ABC transporter ARUE_c38710 PF05872 Bacterial protein of unknown function (DUF853) ARUE_c38740 PF00578 AhpC/TSA family ARUE_c38740 PF02683 Cytochrome C biogenesis protein transmembrane region ARUE_c38740 PF17991 Thioredoxin like C-terminal domain ARUE_c38750 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) ARUE_c38750 PF05425 Copper resistance protein D ARUE_c38760 PF00216 Bacterial DNA-binding protein ARUE_c38770 PF13302 Acetyltransferase (GNAT) domain ARUE_c38820 PF00561 alpha/beta hydrolase fold ARUE_c38830 PF03704 Bacterial transcriptional activator domain ARUE_c38830 PF00486 Transcriptional regulatory protein, C terminal ARUE_c38830 PF00931 NB-ARC domain ARUE_c38870 PF00253 Ribosomal protein S14p/S29e ARUE_c38880 PF00471 Ribosomal protein L33 ARUE_c38890 PF00830 Ribosomal L28 family ARUE_c38950 PF08021 Siderophore-interacting FAD-binding domain ARUE_c38950 PF04954 Siderophore-interacting protein ARUE_c38960 PF00005 ABC transporter ARUE_c38970 PF01032 FecCD transport family ARUE_c38980 PF01032 FecCD transport family ARUE_c39060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c39060 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c39060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c39090 PF01613 Flavin reductase like domain ARUE_c39100 PF00248 Aldo/keto reductase family ARUE_c39120 PF00248 Aldo/keto reductase family ARUE_c39130 PF01432 Peptidase family M3 ARUE_c39260 PF00392 Bacterial regulatory proteins, gntR family ARUE_c39260 PF07729 FCD domain ARUE_c39280 PF10415 Fumarase C C-terminus ARUE_c39280 PF00206 Lyase ARUE_c39290 PF00324 Amino acid permease ARUE_c39300 PF00392 Bacterial regulatory proteins, gntR family ARUE_c39300 PF07729 FCD domain ARUE_c39320 PF00248 Aldo/keto reductase family ARUE_c39330 PF05336 L-rhamnose mutarotase ARUE_c39350 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ARUE_c39350 PF13378 Enolase C-terminal domain-like ARUE_c39360 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c39390 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c39390 PF17862 AAA+ lid domain ARUE_c39390 PF06480 FtsH Extracellular ARUE_c39390 PF01434 Peptidase family M41 ARUE_c39410 PF04607 Region found in RelA / SpoT proteins ARUE_c39410 PF02824 TGS domain ARUE_c39410 PF13291 ACT domain ARUE_c39420 PF00106 short chain dehydrogenase ARUE_c39430 PF02909 Tetracyclin repressor-like, C-terminal domain ARUE_c39430 PF00440 Bacterial regulatory proteins, tetR family ARUE_c39450 PF00749 tRNA synthetases class I (E and Q), catalytic domain ARUE_c39480 PF01810 LysE type translocator ARUE_c39510 PF01022 Bacterial regulatory protein, arsR family ARUE_c39550 PF00072 Response regulator receiver domain ARUE_c39550 PF00196 Bacterial regulatory proteins, luxR family ARUE_c39570 PF01614 Bacterial transcriptional regulator ARUE_c39570 PF09339 IclR helix-turn-helix domain ARUE_c39580 PF01321 Creatinase/Prolidase N-terminal domain ARUE_c39580 PF00557 Metallopeptidase family M24 ARUE_c39590 PF00083 Sugar (and other) transporter ARUE_c39590 PF08946 Osmosensory transporter coiled coil ARUE_c39600 PF07729 FCD domain ARUE_c39600 PF00392 Bacterial regulatory proteins, gntR family ARUE_c39610 PF00464 Serine hydroxymethyltransferase ARUE_c39620 PF01266 FAD dependent oxidoreductase ARUE_c39630 PF04267 Sarcosine oxidase, delta subunit family ARUE_c39640 PF17806 Sarcosine oxidase A3 domain ARUE_c39640 PF08669 Glycine cleavage T-protein C-terminal barrel domain ARUE_c39640 PF01571 Aminomethyltransferase folate-binding domain ARUE_c39640 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c39650 PF04268 Sarcosine oxidase, gamma subunit family ARUE_c39660 PF03313 Serine dehydratase alpha chain ARUE_c39660 PF03315 Serine dehydratase beta chain ARUE_c39670 PF00551 Formyl transferase ARUE_c39700 PF00390 Malic enzyme, N-terminal domain ARUE_c39700 PF03949 Malic enzyme, NAD binding domain ARUE_c39710 PF00440 Bacterial regulatory proteins, tetR family ARUE_c39710 PF17925 Tetracyclin repressor-like, C-terminal domain ARUE_c39760 PF03737 Aldolase/RraA ARUE_c39770 PF07690 Major Facilitator Superfamily ARUE_c39780 PF00221 Aromatic amino acid lyase ARUE_c39790 PF17391 Urocanase N-terminal domain ARUE_c39790 PF01175 Urocanase Rossmann-like domain ARUE_c39790 PF17392 Urocanase C-terminal domain ARUE_c39810 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c39820 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c39830 PF00571 CBS domain ARUE_c39830 PF00005 ABC transporter ARUE_c39850 PF01546 Peptidase family M20/M25/M40 ARUE_c39870 PF00083 Sugar (and other) transporter ARUE_c39880 PF07690 Major Facilitator Superfamily ARUE_c39890 PF01047 MarR family ARUE_c39930 PF00005 ABC transporter ARUE_c39930 PF13732 Domain of unknown function (DUF4162) ARUE_c39950 PF00324 Amino acid permease ARUE_c39970 PF00005 ABC transporter ARUE_c39980 PF01032 FecCD transport family ARUE_c39990 PF01032 FecCD transport family ARUE_c40010 PF08125 Mannitol dehydrogenase C-terminal domain ARUE_c40010 PF01232 Mannitol dehydrogenase Rossmann domain ARUE_c40020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ARUE_c40020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ARUE_c40020 PF02378 Phosphotransferase system, EIIC ARUE_c40040 PF05524 PEP-utilising enzyme, N-terminal ARUE_c40040 PF00391 PEP-utilising enzyme, mobile domain ARUE_c40040 PF02896 PEP-utilising enzyme, TIM barrel domain ARUE_c40080 PF00561 alpha/beta hydrolase fold ARUE_c40090 PF01068 ATP dependent DNA ligase domain ARUE_c40090 PF04679 ATP dependent DNA ligase C terminal region ARUE_c40120 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ARUE_c40120 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ARUE_c40160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c40160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c40180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c40180 PF00005 ABC transporter ARUE_c40190 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c40190 PF12911 N-terminal TM domain of oligopeptide transport permease C ARUE_c40200 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c40220 PF17925 Tetracyclin repressor-like, C-terminal domain ARUE_c40220 PF00440 Bacterial regulatory proteins, tetR family ARUE_c40230 PF03358 NADPH-dependent FMN reductase ARUE_c40280 PF00155 Aminotransferase class I and II ARUE_c40310 PF13520 Amino acid permease ARUE_c40320 PF07969 Amidohydrolase family ARUE_c40340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ARUE_c40340 PF02817 e3 binding domain ARUE_c40340 PF00364 Biotin-requiring enzyme ARUE_c40350 PF02779 Transketolase, pyrimidine binding domain ARUE_c40350 PF02780 Transketolase, C-terminal domain ARUE_c40360 PF00676 Dehydrogenase E1 component ARUE_c40380 PF00155 Aminotransferase class I and II ARUE_c40390 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV ARUE_c40410 PF08328 Adenylosuccinate lyase C-terminal ARUE_c40410 PF00206 Lyase ARUE_c40440 PF03061 Thioesterase superfamily ARUE_c40460 PF00106 short chain dehydrogenase ARUE_c40470 PF00083 Sugar (and other) transporter ARUE_c40470 PF08946 Osmosensory transporter coiled coil ARUE_c40480 PF02626 Carboxyltransferase domain, subdomain A and B ARUE_c40490 PF02682 Carboxyltransferase domain, subdomain C and D ARUE_c40500 PF03746 LamB/YcsF family ARUE_c40510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c40510 PF03466 LysR substrate binding domain ARUE_c40530 PF03737 Aldolase/RraA ARUE_c40570 PF03328 HpcH/HpaI aldolase/citrate lyase family ARUE_c40580 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c40590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c40600 PF00171 Aldehyde dehydrogenase family ARUE_c40610 PF07729 FCD domain ARUE_c40610 PF00392 Bacterial regulatory proteins, gntR family ARUE_c40620 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c40680 PF06445 GyrI-like small molecule binding domain ARUE_c40680 PF12833 Helix-turn-helix domain ARUE_c40710 PF06724 Domain of Unknown Function (DUF1206) ARUE_c40740 PF03780 Asp23 family, cell envelope-related function ARUE_c40780 PF08281 Sigma-70, region 4 ARUE_c40780 PF04542 Sigma-70 region 2 ARUE_c40810 PF00356 Bacterial regulatory proteins, lacI family ARUE_c40820 PF13416 Bacterial extracellular solute-binding protein ARUE_c40830 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c40840 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c40850 PF01842 ACT domain ARUE_c40850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c40850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c40880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c40880 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c40880 PF00989 PAS fold ARUE_c40880 PF11808 Phosphate regulon sensor protein PhoR ARUE_c40890 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain ARUE_c40890 PF01522 Polysaccharide deacetylase ARUE_c40900 PF00069 Protein kinase domain ARUE_c40900 PF03793 PASTA domain ARUE_c40920 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ARUE_c40930 PF00144 Beta-lactamase ARUE_c40940 PF07969 Amidohydrolase family ARUE_c40950 PF00561 alpha/beta hydrolase fold ARUE_c40960 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c41000 PF00795 Carbon-nitrogen hydrolase ARUE_c41030 PF01381 Helix-turn-helix ARUE_c41030 PF07883 Cupin domain ARUE_c41040 PF00892 EamA-like transporter family ARUE_c41050 PF00701 Dihydrodipicolinate synthetase family ARUE_c41080 PF00723 Glycosyl hydrolases family 15 ARUE_c41100 PF05239 PRC-barrel domain ARUE_c41100 PF09557 Domain of unknown function (DUF2382) ARUE_c41120 PF00282 Pyridoxal-dependent decarboxylase conserved domain ARUE_c41140 PF07690 Major Facilitator Superfamily ARUE_c41180 PF13411 MerR HTH family regulatory protein ARUE_c41200 PF01494 FAD binding domain ARUE_c41210 PF01614 Bacterial transcriptional regulator ARUE_c41210 PF09339 IclR helix-turn-helix domain ARUE_c41220 PF07690 Major Facilitator Superfamily ARUE_c41290 PF01594 AI-2E family transporter ARUE_c41300 PF13396 Phospholipase_D-nuclease N-terminal ARUE_c41300 PF13091 PLD-like domain ARUE_c41330 PF00069 Protein kinase domain ARUE_c41330 PF03793 PASTA domain ARUE_c41350 PF01047 MarR family ARUE_c41420 PF04055 Radical SAM superfamily ARUE_c41420 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ARUE_c41430 PF03315 Serine dehydratase beta chain ARUE_c41430 PF03313 Serine dehydratase alpha chain ARUE_c41440 PF00464 Serine hydroxymethyltransferase ARUE_c41450 PF01597 Glycine cleavage H-protein ARUE_c41460 PF01571 Aminomethyltransferase folate-binding domain ARUE_c41460 PF08669 Glycine cleavage T-protein C-terminal barrel domain ARUE_c41470 PF02347 Glycine cleavage system P-protein ARUE_c41480 PF17853 GGDEF-like domain ARUE_c41480 PF13556 PucR C-terminal helix-turn-helix domain ARUE_c41480 PF05651 Putative sugar diacid recognition ARUE_c41490 PF00491 Arginase family ARUE_c41500 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ARUE_c41510 PF00171 Aldehyde dehydrogenase family ARUE_c41530 PF01741 Large-conductance mechanosensitive channel, MscL ARUE_c41580 PF02233 NAD(P) transhydrogenase beta subunit ARUE_c41590 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ARUE_c41600 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ARUE_c41600 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ARUE_c41610 PF03358 NADPH-dependent FMN reductase ARUE_c41630 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c41710 PF07690 Major Facilitator Superfamily ARUE_c41720 PF01494 FAD binding domain ARUE_c41730 PF13193 AMP-binding enzyme C-terminal domain ARUE_c41730 PF00501 AMP-binding enzyme ARUE_c41760 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c41770 PF01042 Endoribonuclease L-PSP ARUE_c41790 PF01614 Bacterial transcriptional regulator ARUE_c41790 PF09339 IclR helix-turn-helix domain ARUE_c41800 PF01144 Coenzyme A transferase ARUE_c41810 PF01144 Coenzyme A transferase ARUE_c41820 PF02803 Thiolase, C-terminal domain ARUE_c41820 PF00108 Thiolase, N-terminal domain ARUE_c41830 PF02627 Carboxymuconolactone decarboxylase family ARUE_c41840 PF00561 alpha/beta hydrolase fold ARUE_c41850 PF00206 Lyase ARUE_c41850 PF10397 Adenylosuccinate lyase C-terminus ARUE_c41870 PF00775 Dioxygenase ARUE_c41870 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ARUE_c41890 PF08501 Shikimate dehydrogenase substrate binding domain ARUE_c41890 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ARUE_c41900 PF01614 Bacterial transcriptional regulator ARUE_c41900 PF09339 IclR helix-turn-helix domain ARUE_c41910 PF07690 Major Facilitator Superfamily ARUE_c41910 PF00083 Sugar (and other) transporter ARUE_c41940 PF02597 ThiS family ARUE_c41960 PF05230 MASE2 domain ARUE_c41960 PF00990 Diguanylate cyclase, GGDEF domain ARUE_c41980 PF03466 LysR substrate binding domain ARUE_c41980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c42020 PF02447 GntP family permease ARUE_c42040 PF07969 Amidohydrolase family ARUE_c42060 PF00294 pfkB family carbohydrate kinase ARUE_c42070 PF01614 Bacterial transcriptional regulator ARUE_c42070 PF09339 IclR helix-turn-helix domain ARUE_c42080 PF01042 Endoribonuclease L-PSP ARUE_c42120 PF00128 Alpha amylase, catalytic domain ARUE_c42120 PF16738 Starch-binding module 26 ARUE_c42130 PF00665 Integrase core domain ARUE_c42140 PF03976 Polyphosphate kinase 2 (PPK2) ARUE_c42160 PF01418 Helix-turn-helix domain, rpiR family ARUE_c42160 PF01380 SIS domain ARUE_c42170 PF07075 Protein of unknown function (DUF1343) ARUE_c42180 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c42180 PF01915 Glycosyl hydrolase family 3 C-terminal domain ARUE_c42210 PF00356 Bacterial regulatory proteins, lacI family ARUE_c42220 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c42230 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c42240 PF01547 Bacterial extracellular solute-binding protein ARUE_c42250 PF08533 Beta-galactosidase C-terminal domain ARUE_c42250 PF02449 Beta-galactosidase ARUE_c42250 PF08532 Beta-galactosidase trimerisation domain ARUE_c42320 PF00581 Rhodanese-like domain ARUE_c42330 PF01614 Bacterial transcriptional regulator ARUE_c42330 PF09339 IclR helix-turn-helix domain ARUE_c42340 PF02838 Glycosyl hydrolase family 20, domain 2 ARUE_c42340 PF07691 PA14 domain ARUE_c42340 PF00728 Glycosyl hydrolase family 20, catalytic domain ARUE_c42350 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c42360 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c42380 PF02583 Metal-sensitive transcriptional repressor ARUE_c42400 PF00403 Heavy-metal-associated domain ARUE_c42470 PF01554 MatE ARUE_c42490 PF07681 DoxX ARUE_c42500 PF00391 PEP-utilising enzyme, mobile domain ARUE_c42500 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ARUE_c42520 PF03061 Thioesterase superfamily ARUE_c42580 PF02780 Transketolase, C-terminal domain ARUE_c42580 PF02779 Transketolase, pyrimidine binding domain ARUE_c42590 PF00456 Transketolase, thiamine diphosphate binding domain ARUE_c42600 PF00083 Sugar (and other) transporter ARUE_c42610 PF01261 Xylose isomerase-like TIM barrel ARUE_c42630 PF02734 DAK2 domain ARUE_c42630 PF02733 Dak1 domain ARUE_c42640 PF02502 Ribose/Galactose Isomerase ARUE_c42680 PF00772 DnaB-like helicase N terminal domain ARUE_c42680 PF03796 DnaB-like helicase C terminal domain ARUE_c42730 PF03358 NADPH-dependent FMN reductase ARUE_c42760 PF02447 GntP family permease ARUE_c42770 PF02515 CoA-transferase family III ARUE_c42780 PF00682 HMGL-like ARUE_c42790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c42790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c42800 PF02595 Glycerate kinase family ARUE_c42870 PF09339 IclR helix-turn-helix domain ARUE_c42870 PF01614 Bacterial transcriptional regulator ARUE_c42880 PF00005 ABC transporter ARUE_c42920 PF01281 Ribosomal protein L9, N-terminal domain ARUE_c42920 PF03948 Ribosomal protein L9, C-terminal domain ARUE_c42930 PF01084 Ribosomal protein S18 ARUE_c42940 PF00436 Single-strand binding protein family ARUE_c42950 PF01250 Ribosomal protein S6 ARUE_c42960 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ARUE_c42990 PF00324 Amino acid permease ARUE_c43000 PF02127 Aminopeptidase I zinc metalloprotease (M18) ARUE_c43020 PF00072 Response regulator receiver domain ARUE_c43020 PF00196 Bacterial regulatory proteins, luxR family ARUE_c43030 PF07730 Histidine kinase ARUE_c43030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c43050 PF00005 ABC transporter ARUE_c43070 PF07690 Major Facilitator Superfamily ARUE_c43080 PF08220 DeoR-like helix-turn-helix domain ARUE_c43080 PF00455 DeoR C terminal sensor domain ARUE_c43090 PF12848 ABC transporter ARUE_c43090 PF16326 ABC transporter C-terminal domain ARUE_c43090 PF00005 ABC transporter ARUE_c43100 PF00144 Beta-lactamase ARUE_c43110 PF00905 Penicillin binding protein transpeptidase domain ARUE_c43120 PF17137 Domain of unknown function (DUF5110) ARUE_c43120 PF01055 Glycosyl hydrolases family 31 ARUE_c43120 PF16338 Domain of unknown function (DUF4968) ARUE_c43130 PF00196 Bacterial regulatory proteins, luxR family ARUE_c43130 PF00072 Response regulator receiver domain ARUE_c43140 PF07730 Histidine kinase ARUE_c43160 PF00027 Cyclic nucleotide-binding domain ARUE_c43160 PF00005 ABC transporter ARUE_c43170 PF01638 HxlR-like helix-turn-helix ARUE_c43180 PF13460 NAD(P)H-binding ARUE_c43210 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c43220 PF01743 Poly A polymerase head domain ARUE_c43220 PF12627 Probable RNA and SrmB- binding site of polymerase A ARUE_c43220 PF13735 tRNA nucleotidyltransferase domain 2 putative ARUE_c43230 PF00293 NUDIX domain ARUE_c43240 PF03023 Lipid II flippase MurJ ARUE_c43260 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c43270 PF00085 Thioredoxin ARUE_c43320 PF02195 ParB-like nuclease domain ARUE_c43320 PF17762 HTH domain found in ParB protein ARUE_c43330 PF13614 AAA domain ARUE_c43340 PF02527 rRNA small subunit methyltransferase G ARUE_c43360 PF02096 60Kd inner membrane protein ARUE_c43370 PF01809 Putative membrane protein insertion efficiency factor