locus-tag	class	description
ARUE_113p00030	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ARUE_113p00070	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ARUE_113p00140	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ARUE_113p00150	COG0563	adenylate kinase activity
ARUE_113p00180	COG0251	oxidation-reduction process
ARUE_113p00210	COG1946	Acyl-CoA thioesterase
ARUE_113p00490	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ARUE_113p00560	COG1393	Belongs to the ArsC family
ARUE_113p00620	COG1674	ftsk spoiiie
ARUE_113p00660	COG0741	lytic transglycosylase activity
ARUE_113p00660	COG0739	heme binding
ARUE_113p00660	COG1196	nuclear chromosome segregation
ARUE_113p00680	COG0433	COG0433 Predicted ATPase
ARUE_232p00010	COG1192	Involved in chromosome partitioning
ARUE_232p00230	COG0477	Major facilitator Superfamily
ARUE_232p00240	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ARUE_232p00260	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ARUE_232p00300	COG1937	Protein conserved in bacteria
ARUE_232p00320	COG2132	Multicopper oxidase
ARUE_232p00340	COG0640	Transcriptional regulator
ARUE_232p00400	COG2372	response to copper ion
ARUE_232p00450	COG3336	cytochrome c oxidase
ARUE_232p00460	COG0640	Transcriptional regulator
ARUE_232p00500	COG0739	heme binding
ARUE_232p00510	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ARUE_232p00540	COG0785	Cytochrome C biogenesis protein
ARUE_232p00680	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ARUE_232p00690	COG0785	Cytochrome C biogenesis protein
ARUE_232p00720	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ARUE_232p00780	COG2217	Heavy metal translocating P-type atpase
ARUE_232p00810	COG0789	Transcriptional regulator
ARUE_232p01000	COG1475	DNA binding
ARUE_232p01100	COG2801	Transposase and inactivated derivatives
ARUE_232p01180	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ARUE_232p01220	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ARUE_232p01230	COG3119	arylsulfatase activity
ARUE_232p01260	COG1940	carbohydrate kinase activity
ARUE_232p01330	COG3291	Pkd domain containing protein
ARUE_232p01390	COG2801	Transposase and inactivated derivatives
ARUE_232p01390	COG3415	Transposase
ARUE_232p01430	COG3938	Belongs to the proline racemase family
ARUE_232p01470	COG1802	Transcriptional regulator
ARUE_232p01500	COG0765	amino acid transport
ARUE_232p01510	COG0765	amino acid transport
ARUE_232p01570	COG0006	proline dipeptidase activity
ARUE_232p01590	COG0601	transmembrane transport
ARUE_232p01600	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ARUE_232p01620	COG0747	negative chemotaxis
ARUE_232p01670	COG2271	Major facilitator Superfamily
ARUE_232p01720	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ARUE_232p01730	COG3291	Pkd domain containing protein
ARUE_232p01810	COG4974	Belongs to the 'phage' integrase family
ARUE_232p01900	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ARUE_232p01940	COG4974	Belongs to the 'phage' integrase family
ARUE_232p02020	COG5002	protein histidine kinase activity
ARUE_232p02020	COG2176	DNA-directed DNA polymerase activity
ARUE_c00010	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ARUE_c00020	COG0592	DNA-directed DNA polymerase activity
ARUE_c00030	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
ARUE_c00040	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ARUE_c00050	COG0187	DNA topoisomerase II activity
ARUE_c00060	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ARUE_c00070	COG3266	domain, Protein
ARUE_c00110	COG1215	transferase activity, transferring glycosyl groups
ARUE_c00140	COG0705	Rhomboid family
ARUE_c00140	COG0457	Tetratricopeptide repeat
ARUE_c00170	COG2818	Glycosylase
ARUE_c00190	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ARUE_c00190	COG2169	Transcriptional regulator
ARUE_c00200	COG1595	DNA-templated transcription, initiation
ARUE_c00230	COG3764	Sortase (surface protein transpeptidase)
ARUE_c00250	COG2815	serine threonine protein kinase
ARUE_c00250	COG0515	serine threonine protein kinase
ARUE_c00260	COG0515	serine threonine protein kinase
ARUE_c00270	COG0768	penicillin binding
ARUE_c00300	COG1716	ATPase activity
ARUE_c00310	COG1716	ATPase activity
ARUE_c00440	COG0346	lactoylglutathione lyase activity
ARUE_c00470	COG2186	Transcriptional regulator
ARUE_c00480	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
ARUE_c00490	COG0477	Major facilitator Superfamily
ARUE_c00500	COG1984	allophanate hydrolase subunit 2
ARUE_c00510	COG4770	biotin carboxylase activity
ARUE_c00520	COG0277	FAD linked oxidase domain protein
ARUE_c00540	COG0385	Bile acid
ARUE_c00550	COG0659	secondary active sulfate transmembrane transporter activity
ARUE_c00590	COG0435	Glutathione S-transferase
ARUE_c00600	COG0561	phosphatase activity
ARUE_c00660	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ARUE_c00670	COG1929	Belongs to the glycerate kinase type-1 family
ARUE_c00760	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ARUE_c00790	COG0693	protein deglycase activity
ARUE_c00840	COG0395	ABC-type sugar transport system, permease component
ARUE_c00880	COG2233	PERMEase
ARUE_c00900	COG0778	Nitroreductase
ARUE_c00950	COG3104	oligopeptide transport
ARUE_c00970	COG3340	Belongs to the peptidase S51 family
ARUE_c00980	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ARUE_c00980	COG0425	Belongs to the sulfur carrier protein TusA family
ARUE_c00990	COG0077	Prephenate dehydratase
ARUE_c01000	COG1597	lipid kinase activity
ARUE_c01010	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ARUE_c01030	COG0561	phosphatase activity
ARUE_c01070	COG1191	sigma factor activity
ARUE_c01090	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ARUE_c01100	COG0859	PFAM glycosyl transferase family 9
ARUE_c01120	COG0438	transferase activity, transferring glycosyl groups
ARUE_c01130	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
ARUE_c01140	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
ARUE_c01140	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ARUE_c01170	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
ARUE_c01170	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ARUE_c01310	COG0037	tRNA processing
ARUE_c01350	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ARUE_c01360	COG0302	gtp cyclohydrolase
ARUE_c01380	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ARUE_c01440	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ARUE_c01450	COG2814	Major facilitator Superfamily
ARUE_c01570	COG2267	carboxylic ester hydrolase activity
ARUE_c01590	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ARUE_c01630	COG1819	glycosyl
ARUE_c01640	COG1506	peptidase
ARUE_c01640	COG0823	Involved in the tonB-independent uptake of proteins
ARUE_c01650	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
ARUE_c01680	COG2376	Dihydroxyacetone kinase
ARUE_c01690	COG1461	Dihydroxyacetone kinase
ARUE_c01700	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
ARUE_c01710	COG3237	CsbD-like
ARUE_c01790	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
ARUE_c01820	COG3665	Urea carboxylase-associated protein
ARUE_c01890	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ARUE_c01920	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ARUE_c02050	COG1609	Transcriptional regulator
ARUE_c02080	COG0831	urea catabolic process
ARUE_c02090	COG0832	Belongs to the urease beta subunit family
ARUE_c02100	COG0804	urea catabolic process
ARUE_c02110	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
ARUE_c02120	COG0830	nickel cation binding
ARUE_c02130	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ARUE_c02140	COG0829	nickel cation binding
ARUE_c02150	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
ARUE_c02250	COG0656	L-ascorbic acid biosynthetic process
ARUE_c02270	COG0667	Aldo Keto reductase
ARUE_c02280	COG0656	L-ascorbic acid biosynthetic process
ARUE_c02300	COG3360	Dodecin
ARUE_c02310	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c02340	COG4677	pectinesterase activity
ARUE_c02350	COG0395	ABC-type sugar transport system, permease component
ARUE_c02360	COG1175	transmembrane transport
ARUE_c02420	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
ARUE_c02430	COG1233	COG1233 Phytoene dehydrogenase and related
ARUE_c02500	COG2186	Transcriptional regulator
ARUE_c02510	COG2267	carboxylic ester hydrolase activity
ARUE_c02530	COG2084	Dehydrogenase
ARUE_c02540	COG2610	gluconate transmembrane transporter activity
ARUE_c02650	COG3486	L-lysine 6-monooxygenase (NADPH) activity
ARUE_c02690	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c02740	COG0346	lactoylglutathione lyase activity
ARUE_c02760	COG0697	spore germination
ARUE_c02770	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ARUE_c02780	COG0477	Major facilitator Superfamily
ARUE_c02790	COG2890	protein-(glutamine-N5) methyltransferase activity
ARUE_c02810	COG1793	dna ligase
ARUE_c02810	COG3285	dna ligase
ARUE_c02820	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
ARUE_c02920	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ARUE_c02920	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ARUE_c02920	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ARUE_c02940	COG1349	DNA-binding transcription factor activity
ARUE_c02980	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
ARUE_c03030	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ARUE_c03130	COG1846	Transcriptional regulator
ARUE_c03160	COG1233	COG1233 Phytoene dehydrogenase and related
ARUE_c03180	COG0142	geranyltranstransferase activity
ARUE_c03190	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
ARUE_c03290	COG0129	dihydroxy-acid dehydratase activity
ARUE_c03300	COG0028	Belongs to the TPP enzyme family
ARUE_c03330	COG2066	Belongs to the glutaminase family
ARUE_c03370	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
ARUE_c03410	COG2733	membrane
ARUE_c03540	COG1132	(ABC) transporter
ARUE_c03550	COG1132	(ABC) transporter
ARUE_c03590	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ARUE_c03600	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ARUE_c03610	COG1120	ATPase activity
ARUE_c03620	COG0583	DNA-binding transcription factor activity
ARUE_c03640	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c03710	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
ARUE_c03750	COG2902	Dehydrogenase
ARUE_c03790	COG2252	PERMEase
ARUE_c03840	COG0574	Belongs to the PEP-utilizing enzyme family
ARUE_c03840	COG3848	Pyruvate phosphate dikinase
ARUE_c03870	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ARUE_c03980	COG1937	Protein conserved in bacteria
ARUE_c04020	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ARUE_c04030	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ARUE_c04050	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ARUE_c04090	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
ARUE_c04100	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ARUE_c04130	COG1175	transmembrane transport
ARUE_c04140	COG0395	ABC-type sugar transport system, permease component
ARUE_c04240	COG1595	DNA-templated transcription, initiation
ARUE_c04280	COG1653	transport
ARUE_c04290	COG1175	transmembrane transport
ARUE_c04300	COG0395	ABC-type sugar transport system, permease component
ARUE_c04310	COG1609	Transcriptional regulator
ARUE_c04350	COG2197	response regulator
ARUE_c04360	COG4585	Histidine kinase
ARUE_c04390	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ARUE_c04410	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ARUE_c04460	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ARUE_c04490	COG1063	alcohol dehydrogenase
ARUE_c04510	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ARUE_c04520	COG3404	Formiminotransferase-cyclodeaminase
ARUE_c04550	COG1802	Transcriptional regulator
ARUE_c04560	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
ARUE_c04580	COG2271	Major facilitator Superfamily
ARUE_c04590	COG0583	DNA-binding transcription factor activity
ARUE_c04620	COG2197	response regulator
ARUE_c04670	COG0415	Belongs to the DNA photolyase family
ARUE_c04700	COG1024	Enoyl-CoA hydratase
ARUE_c04800	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ARUE_c04810	COG1960	acyl-CoA dehydrogenase activity
ARUE_c04880	COG0789	Transcriptional regulator
ARUE_c04900	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ARUE_c04910	COG1609	Transcriptional regulator
ARUE_c04940	COG0395	ABC-type sugar transport system, permease component
ARUE_c04960	COG0673	inositol 2-dehydrogenase activity
ARUE_c04980	COG1904	glucuronate isomerase
ARUE_c04990	COG0246	Mannitol dehydrogenase
ARUE_c05000	COG4948	Mandelate Racemase Muconate Lactonizing
ARUE_c05010	COG3265	gluconokinase activity
ARUE_c05020	COG4213	ABC transporter substrate-binding protein
ARUE_c05030	COG1129	ABC transporter
ARUE_c05040	COG4214	carbohydrate transport
ARUE_c05050	COG1609	Transcriptional regulator
ARUE_c05060	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ARUE_c05080	COG4152	abc transporter atp-binding protein
ARUE_c05090	COG1668	transmembrane transport
ARUE_c05130	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ARUE_c05170	COG2197	response regulator
ARUE_c05180	COG4585	Histidine kinase
ARUE_c05260	COG1120	ATPase activity
ARUE_c05270	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ARUE_c05280	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ARUE_c05290	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ARUE_c05310	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ARUE_c05340	COG2814	Major facilitator Superfamily
ARUE_c05380	COG0583	DNA-binding transcription factor activity
ARUE_c05390	COG0039	L-malate dehydrogenase activity
ARUE_c05400	COG2072	flavoprotein involved in K transport
ARUE_c05450	COG0583	DNA-binding transcription factor activity
ARUE_c05460	COG0477	Major facilitator Superfamily
ARUE_c05500	COG1012	belongs to the aldehyde dehydrogenase family
ARUE_c05520	COG0477	Major facilitator Superfamily
ARUE_c05530	COG2267	carboxylic ester hydrolase activity
ARUE_c05550	COG3263	regulation of cellular component size
ARUE_c05560	COG5492	domain, Protein
ARUE_c05560	COG4932	domain protein
ARUE_c05610	COG1609	Transcriptional regulator
ARUE_c05630	COG0765	amino acid transport
ARUE_c05640	COG1126	abc transporter atp-binding protein
ARUE_c05650	COG0673	inositol 2-dehydrogenase activity
ARUE_c05760	COG1832	CoA-binding protein
ARUE_c05780	COG2315	Protein conserved in bacteria
ARUE_c05810	COG1175	transmembrane transport
ARUE_c05860	COG2368	4-hydroxyphenylacetate
ARUE_c05920	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ARUE_c05930	COG3706	GGDEF domain
ARUE_c05960	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ARUE_c05970	COG0047	phosphoribosylformylglycinamidine synthase activity
ARUE_c06000	COG3546	catalase activity
ARUE_c06060	COG1846	Transcriptional regulator
ARUE_c06090	COG1174	glycine betaine transport
ARUE_c06100	COG0517	IMP dehydrogenase activity
ARUE_c06100	COG1125	glycine betaine transport
ARUE_c06110	COG1174	glycine betaine transport
ARUE_c06120	COG1732	Glycine betaine
ARUE_c06140	COG4948	Mandelate Racemase Muconate Lactonizing
ARUE_c06150	COG1012	belongs to the aldehyde dehydrogenase family
ARUE_c06160	COG2084	Dehydrogenase
ARUE_c06190	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c06230	COG2814	Major facilitator Superfamily
ARUE_c06290	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ARUE_c06310	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ARUE_c06350	COG1012	belongs to the aldehyde dehydrogenase family
ARUE_c06390	COG0741	lytic transglycosylase activity
ARUE_c06390	COG1196	nuclear chromosome segregation
ARUE_c06390	COG0739	heme binding
ARUE_c06400	COG0386	Belongs to the glutathione peroxidase family
ARUE_c06410	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ARUE_c06470	COG1309	transcriptional regulator
ARUE_c06510	COG0395	ABC-type sugar transport system, permease component
ARUE_c06540	COG0438	transferase activity, transferring glycosyl groups
ARUE_c06570	COG1621	beta-fructofuranosidase activity
ARUE_c06580	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ARUE_c06610	COG0395	ABC-type sugar transport system, permease component
ARUE_c06630	COG1653	transport
ARUE_c06650	COG0589	response to stress
ARUE_c06690	COG3290	protein histidine kinase activity
ARUE_c06700	COG4565	transcriptional regulatory protein
ARUE_c06740	COG4702	Belongs to the UPF0303 family
ARUE_c06760	COG0823	Involved in the tonB-independent uptake of proteins
ARUE_c06790	COG0673	inositol 2-dehydrogenase activity
ARUE_c06890	COG0351	phosphomethylpyrimidine kinase
ARUE_c06910	COG0642	Histidine kinase
ARUE_c06920	COG0745	RESPONSE REGULATOR receiver
ARUE_c06930	COG0477	Major facilitator Superfamily
ARUE_c06950	COG1090	epimerase
ARUE_c06980	COG0343	queuine tRNA-ribosyltransferase activity
ARUE_c07040	COG3842	ATPase activity
ARUE_c07130	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
ARUE_c07150	COG1215	transferase activity, transferring glycosyl groups
ARUE_c07170	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
ARUE_c07190	COG0586	Pfam SNARE associated Golgi protein
ARUE_c07220	COG0564	pseudouridine synthase activity
ARUE_c07280	COG2364	Membrane
ARUE_c07310	COG1215	transferase activity, transferring glycosyl groups
ARUE_c07330	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ARUE_c07340	COG1201	RNA secondary structure unwinding
ARUE_c07420	COG0438	transferase activity, transferring glycosyl groups
ARUE_c07450	COG0590	tRNA wobble adenosine to inosine editing
ARUE_c07460	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ARUE_c07530	COG2205	protein histidine kinase activity
ARUE_c07540	COG0745	RESPONSE REGULATOR receiver
ARUE_c07560	COG2062	phosphohistidine phosphatase, SixA
ARUE_c07580	COG0583	DNA-binding transcription factor activity
ARUE_c07590	COG0697	spore germination
ARUE_c07620	COG1574	metal-dependent hydrolase with the TIM-barrel fold
ARUE_c07640	COG0601	transmembrane transport
ARUE_c07670	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ARUE_c07690	COG1309	transcriptional regulator
ARUE_c07700	COG1511	domain protein
ARUE_c07740	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
ARUE_c07750	COG1940	carbohydrate kinase activity
ARUE_c07760	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ARUE_c07770	COG4608	Belongs to the ABC transporter superfamily
ARUE_c07780	COG0444	Belongs to the ABC transporter superfamily
ARUE_c07800	COG0747	negative chemotaxis
ARUE_c07810	COG2186	Transcriptional regulator
ARUE_c07830	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
ARUE_c07840	COG1017	nitric oxide dioxygenase activity
ARUE_c07840	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ARUE_c07870	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ARUE_c07880	COG0514	ATP-dependent DNA helicase (RecQ)
ARUE_c07890	COG0477	Major facilitator Superfamily
ARUE_c07910	COG1505	serine-type exopeptidase activity
ARUE_c07930	COG1113	amino acid transport
ARUE_c07990	COG1966	Carbon starvation protein
ARUE_c08030	COG0656	L-ascorbic acid biosynthetic process
ARUE_c08050	COG0154	amidase activity
ARUE_c08080	COG1473	amidohydrolase
ARUE_c08130	COG3959	Transketolase, thiamine diphosphate binding domain
ARUE_c08140	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ARUE_c08150	COG1105	Belongs to the carbohydrate kinase PfkB family
ARUE_c08170	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ARUE_c08200	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c08220	COG0583	DNA-binding transcription factor activity
ARUE_c08250	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c08260	COG1879	ABC-type sugar transport system periplasmic component
ARUE_c08270	COG1129	ABC transporter
ARUE_c08280	COG1172	Belongs to the binding-protein-dependent transport system permease family
ARUE_c08290	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c08300	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c08320	COG2814	Major facilitator Superfamily
ARUE_c08400	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ARUE_c08410	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ARUE_c08450	COG0588	phosphoglycerate mutase activity
ARUE_c08470	COG5002	protein histidine kinase activity
ARUE_c08510	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
ARUE_c08520	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ARUE_c08540	COG0215	cysteine-tRNA ligase activity
ARUE_c08610	COG0366	Alpha amylase catalytic
ARUE_c08630	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ARUE_c08700	COG0366	Alpha amylase catalytic
ARUE_c08730	COG3833	ABC-type maltose transport systems, permease component
ARUE_c08740	COG0366	Alpha amylase catalytic
ARUE_c08750	COG0277	FAD linked oxidase domain protein
ARUE_c08780	COG0402	S-adenosylhomocysteine deaminase activity
ARUE_c08820	COG3842	ATPase activity
ARUE_c08840	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
ARUE_c08930	COG0586	Pfam SNARE associated Golgi protein
ARUE_c08950	COG0395	ABC-type sugar transport system, permease component
ARUE_c08960	COG1175	transmembrane transport
ARUE_c08970	COG1653	transport
ARUE_c08990	COG1621	beta-fructofuranosidase activity
ARUE_c09010	COG0514	ATP-dependent DNA helicase (RecQ)
ARUE_c09020	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ARUE_c09130	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c09150	COG1960	acyl-CoA dehydrogenase activity
ARUE_c09200	COG0579	oxidoreductase
ARUE_c09260	COG2957	Belongs to the agmatine deiminase family
ARUE_c09280	COG0024	Methionine aminopeptidase
ARUE_c09330	COG1473	amidohydrolase
ARUE_c09360	COG0477	Major facilitator Superfamily
ARUE_c09380	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ARUE_c09380	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ARUE_c09390	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ARUE_c09400	COG0509	glycine decarboxylation via glycine cleavage system
ARUE_c09420	COG1760	l-serine dehydratase
ARUE_c09430	COG1864	DNA RNA non-specific endonuclease
ARUE_c09430	COG3591	Belongs to the peptidase S1B family
ARUE_c09520	COG0459	protein refolding
ARUE_c09550	COG2205	protein histidine kinase activity
ARUE_c09560	COG0745	RESPONSE REGULATOR receiver
ARUE_c09580	COG0583	DNA-binding transcription factor activity
ARUE_c09600	COG2132	Multicopper oxidase
ARUE_c09670	COG2814	Major facilitator Superfamily
ARUE_c09710	COG0739	heme binding
ARUE_c09750	COG0746	molybdenum cofactor guanylyltransferase activity
ARUE_c09780	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
ARUE_c09820	COG1126	abc transporter atp-binding protein
ARUE_c09830	COG0765	amino acid transport
ARUE_c09840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ARUE_c09870	COG0488	(ABC) transporter
ARUE_c09880	COG1132	(ABC) transporter
ARUE_c09890	COG0494	nUDIX hydrolase
ARUE_c09940	COG0483	inositol monophosphate 1-phosphatase activity
ARUE_c09980	COG0045	succinate-CoA ligase (ADP-forming) activity
ARUE_c10010	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
ARUE_c10090	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ARUE_c10100	COG1396	sequence-specific DNA binding
ARUE_c10140	COG0028	Belongs to the TPP enzyme family
ARUE_c10240	COG1401	restriction endodeoxyribonuclease activity
ARUE_c10270	COG5002	protein histidine kinase activity
ARUE_c10280	COG0745	RESPONSE REGULATOR receiver
ARUE_c10300	COG1012	belongs to the aldehyde dehydrogenase family
ARUE_c10330	COG1024	Enoyl-CoA hydratase
ARUE_c10340	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ARUE_c10360	COG0477	Major facilitator Superfamily
ARUE_c10370	COG1396	sequence-specific DNA binding
ARUE_c10420	COG0156	8-amino-7-oxononanoate synthase activity
ARUE_c10430	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ARUE_c10440	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ARUE_c10460	COG3237	CsbD-like
ARUE_c10470	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c10510	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
ARUE_c10520	COG1902	pentaerythritol trinitrate reductase activity
ARUE_c10550	COG2376	Dihydroxyacetone kinase
ARUE_c10560	COG0698	ribose 5-phosphate isomerase
ARUE_c10570	COG1250	3-hydroxyacyl-CoA dehydrogenase
ARUE_c10580	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c10590	COG2271	Major facilitator Superfamily
ARUE_c10600	COG0149	triose-phosphate isomerase activity
ARUE_c10690	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ARUE_c10700	COG0366	Alpha amylase catalytic
ARUE_c10700	COG3103	Sh3 type 3 domain protein
ARUE_c10710	COG1254	Belongs to the acylphosphatase family
ARUE_c10720	COG1309	transcriptional regulator
ARUE_c10740	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ARUE_c10750	COG2186	Transcriptional regulator
ARUE_c10770	COG1957	nucleoside hydrolase
ARUE_c10780	COG0640	Transcriptional regulator
ARUE_c10800	COG4209	transmembrane transport
ARUE_c10810	COG0395	ABC-type sugar transport system, permease component
ARUE_c10840	COG0402	S-adenosylhomocysteine deaminase activity
ARUE_c10900	COG1472	Belongs to the glycosyl hydrolase 3 family
ARUE_c10910	COG0673	inositol 2-dehydrogenase activity
ARUE_c10940	COG1609	Transcriptional regulator
ARUE_c10970	COG0477	Major facilitator Superfamily
ARUE_c10990	COG0604	alcohol dehydrogenase
ARUE_c11010	COG1309	transcriptional regulator
ARUE_c11020	COG0861	Integral membrane protein TerC family
ARUE_c11050	COG0531	amino acid
ARUE_c11070	COG0804	urea catabolic process
ARUE_c11080	COG2072	flavoprotein involved in K transport
ARUE_c11090	COG1278	Cold shock
ARUE_c11170	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ARUE_c11210	COG0789	Transcriptional regulator
ARUE_c11280	COG0477	Major facilitator Superfamily
ARUE_c11290	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
ARUE_c11320	COG0138	bifunctional purine biosynthesis protein purh
ARUE_c11370	COG2838	Isocitrate dehydrogenase
ARUE_c11390	COG3639	organic phosphonate transmembrane transporter activity
ARUE_c11400	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
ARUE_c11430	COG2188	Transcriptional regulator
ARUE_c11440	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ARUE_c11460	COG0673	inositol 2-dehydrogenase activity
ARUE_c11470	COG1136	(ABC) transporter
ARUE_c11480	COG1136	(ABC) transporter
ARUE_c11480	COG0577	efflux transmembrane transporter activity
ARUE_c11490	COG4213	ABC transporter substrate-binding protein
ARUE_c11500	COG1172	Belongs to the binding-protein-dependent transport system permease family
ARUE_c11510	COG1129	ABC transporter
ARUE_c11530	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ARUE_c11550	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ARUE_c11560	COG0531	amino acid
ARUE_c11640	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ARUE_c11650	COG1131	(ABC) transporter
ARUE_c11680	COG0477	Major facilitator Superfamily
ARUE_c11730	COG0180	Tryptophanyl-tRNA synthetase
ARUE_c11800	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ARUE_c11830	COG2009	succinate dehydrogenase
ARUE_c11850	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
ARUE_c11850	COG1473	amidohydrolase
ARUE_c11860	COG1846	Transcriptional regulator
ARUE_c11870	COG1764	response to oxidative stress
ARUE_c11880	COG2130	NADP-dependent
ARUE_c11960	COG0586	Pfam SNARE associated Golgi protein
ARUE_c11970	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ARUE_c11980	COG3956	TIGRFAM MazG family protein
ARUE_c11990	COG0148	phosphopyruvate hydratase activity
ARUE_c12040	COG1252	NADH dehydrogenase
ARUE_c12080	COG1597	lipid kinase activity
ARUE_c12120	COG0559	Belongs to the binding-protein-dependent transport system permease family
ARUE_c12140	COG0183	Belongs to the thiolase family
ARUE_c12150	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
ARUE_c12170	COG2017	converts alpha-aldose to the beta-anomer
ARUE_c12190	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ARUE_c12210	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ARUE_c12230	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
ARUE_c12250	COG1331	Highly conserved protein containing a thioredoxin domain
ARUE_c12270	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ARUE_c12280	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
ARUE_c12360	COG0114	fumarate hydratase activity
ARUE_c12370	COG0288	reversible hydration of carbon dioxide
ARUE_c12390	COG1494	fructose-1,6-bisphosphatase
ARUE_c12410	COG1482	cell wall glycoprotein biosynthetic process
ARUE_c12430	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ARUE_c12530	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ARUE_c12560	COG1357	PFAM Pentapeptide repeats (8 copies)
ARUE_c12710	COG0714	Associated with various cellular activities
ARUE_c12720	COG0084	hydrolase, TatD family'
ARUE_c12730	COG3583	domain protein
ARUE_c12740	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ARUE_c12750	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
ARUE_c12760	COG0488	(ABC) transporter
ARUE_c12780	COG1309	transcriptional regulator
ARUE_c12800	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
ARUE_c12810	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ARUE_c12830	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
ARUE_c12840	COG0193	aminoacyl-tRNA hydrolase activity
ARUE_c12890	COG0822	iron-sulfur transferase activity
ARUE_c12900	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ARUE_c12930	COG0702	epimerase
ARUE_c12950	COG1988	membrane-bound metal-dependent
ARUE_c12970	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
ARUE_c13020	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ARUE_c13020	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ARUE_c13060	COG2814	Major facilitator Superfamily
ARUE_c13100	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ARUE_c13130	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ARUE_c13150	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ARUE_c13160	COG1621	beta-fructofuranosidase activity
ARUE_c13230	COG0243	molybdopterin cofactor binding
ARUE_c13240	COG2223	nitrite transmembrane transporter activity
ARUE_c13250	COG0477	Major facilitator Superfamily
ARUE_c13260	COG4770	biotin carboxylase activity
ARUE_c13270	COG0424	maF-like protein
ARUE_c13280	COG2409	Drug exporters of the RND superfamily
ARUE_c13290	COG1309	transcriptional regulator
ARUE_c13300	COG0393	Putative heavy-metal-binding
ARUE_c13340	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ARUE_c13350	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c13360	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
ARUE_c13360	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
ARUE_c13400	COG0714	Associated with various cellular activities
ARUE_c13440	COG0631	protein serine/threonine phosphatase activity
ARUE_c13480	COG1674	ftsk spoiiie
ARUE_c13490	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ARUE_c13500	COG0483	inositol monophosphate 1-phosphatase activity
ARUE_c13520	COG0667	Aldo Keto reductase
ARUE_c13540	COG1116	anion transmembrane transporter activity
ARUE_c13550	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ARUE_c13580	COG0251	oxidation-reduction process
ARUE_c13590	COG4565	transcriptional regulatory protein
ARUE_c13610	COG2851	Citrate transporter
ARUE_c13650	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ARUE_c13660	COG0154	amidase activity
ARUE_c13670	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ARUE_c13690	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ARUE_c13700	COG4209	transmembrane transport
ARUE_c13710	COG0395	ABC-type sugar transport system, permease component
ARUE_c13740	COG0673	inositol 2-dehydrogenase activity
ARUE_c13760	COG1063	alcohol dehydrogenase
ARUE_c13770	COG0156	8-amino-7-oxononanoate synthase activity
ARUE_c13790	COG1228	amidohydrolase
ARUE_c13800	COG1470	cell adhesion involved in biofilm formation
ARUE_c13800	COG0366	Alpha amylase catalytic
ARUE_c13820	COG1940	carbohydrate kinase activity
ARUE_c13890	COG2873	o-acetylhomoserine
ARUE_c13900	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ARUE_c13970	COG0423	glycine-tRNA ligase activity
ARUE_c13990	COG0277	FAD linked oxidase domain protein
ARUE_c14030	COG0358	DNA primase activity
ARUE_c14070	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ARUE_c14080	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
ARUE_c14090	COG2814	Major facilitator Superfamily
ARUE_c14110	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ARUE_c14150	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
ARUE_c14170	COG0052	Belongs to the universal ribosomal protein uS2 family
ARUE_c14180	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ARUE_c14190	COG0528	UMP kinase activity
ARUE_c14200	COG0233	cytoplasmic translational termination
ARUE_c14210	COG0575	Belongs to the CDS family
ARUE_c14240	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ARUE_c14270	COG3275	phosphorelay sensor kinase activity
ARUE_c14290	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ARUE_c14300	COG1796	DNA polymerase
ARUE_c14300	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
ARUE_c14340	COG1522	sequence-specific DNA binding
ARUE_c14360	COG0022	dehydrogenase e1 component
ARUE_c14370	COG0508	dehydrogenase complex catalyzes the overall conversion of
ARUE_c14380	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ARUE_c14410	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ARUE_c14430	COG1960	acyl-CoA dehydrogenase activity
ARUE_c14480	COG0673	inositol 2-dehydrogenase activity
ARUE_c14500	COG0673	inositol 2-dehydrogenase activity
ARUE_c14520	COG1175	transmembrane transport
ARUE_c14530	COG1653	transport
ARUE_c14540	COG1609	Transcriptional regulator
ARUE_c14560	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ARUE_c14570	COG0750	zinc metalloprotease
ARUE_c14590	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
ARUE_c14620	COG1309	transcriptional regulator
ARUE_c14640	COG1131	(ABC) transporter
ARUE_c14650	COG0442	prolyl-tRNA aminoacylation
ARUE_c14670	COG3570	aminoglycoside hydroxyurea antibiotic resistance kinase
ARUE_c14700	COG0779	Required for maturation of 30S ribosomal subunits
ARUE_c14730	COG0481	GTPase activity
ARUE_c14730	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ARUE_c14740	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ARUE_c14750	COG0590	tRNA wobble adenosine to inosine editing
ARUE_c14770	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ARUE_c14810	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ARUE_c14820	COG1185	polyribonucleotide nucleotidyltransferase activity
ARUE_c14830	COG0612	Peptidase, M16
ARUE_c14870	COG0745	RESPONSE REGULATOR receiver
ARUE_c14880	COG2205	protein histidine kinase activity
ARUE_c14920	COG0521	Mo-molybdopterin cofactor biosynthetic process
ARUE_c14940	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ARUE_c14980	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ARUE_c14990	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
ARUE_c15000	COG1674	ftsk spoiiie
ARUE_c15020	COG1058	Belongs to the CinA family
ARUE_c15020	COG1546	Belongs to the CinA family
ARUE_c15030	COG1396	sequence-specific DNA binding
ARUE_c15060	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ARUE_c15070	COG2137	regulation of response to DNA damage stimulus
ARUE_c15080	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ARUE_c15090	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ARUE_c15100	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ARUE_c15110	COG2813	Specifically methylates the guanine in position
ARUE_c15120	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ARUE_c15140	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ARUE_c15150	COG1388	LysM domain
ARUE_c15160	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ARUE_c15170	COG0131	Imidazoleglycerol-phosphate dehydratase
ARUE_c15180	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ARUE_c15190	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ARUE_c15230	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ARUE_c15240	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ARUE_c15250	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ARUE_c15260	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ARUE_c15280	COG2814	Major facilitator Superfamily
ARUE_c15340	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ARUE_c15350	COG0072	phenylalanine-tRNA ligase activity
ARUE_c15350	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ARUE_c15360	COG3591	Belongs to the peptidase S1B family
ARUE_c15420	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ARUE_c15430	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ARUE_c15440	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ARUE_c15450	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ARUE_c15460	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ARUE_c15470	COG1438	arginine binding
ARUE_c15480	COG0137	argininosuccinate synthase activity
ARUE_c15490	COG0165	Argininosuccinate lyase
ARUE_c15520	COG2094	Belongs to the DNA glycosylase MPG family
ARUE_c15540	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ARUE_c15600	COG0647	UMP catabolic process
ARUE_c15630	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ARUE_c15640	COG0497	DNA recombination
ARUE_c15650	COG0504	CTP synthase activity
ARUE_c15710	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
ARUE_c15720	COG2079	MmgE PrpD family protein
ARUE_c15750	COG2197	response regulator
ARUE_c15770	COG3290	protein histidine kinase activity
ARUE_c15780	COG1301	dicarboxylic acid transport
ARUE_c15800	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ARUE_c15810	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ARUE_c15840	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ARUE_c15860	COG1160	GTP binding
ARUE_c15890	COG2814	Major facilitator Superfamily
ARUE_c15900	COG0509	glycine decarboxylation via glycine cleavage system
ARUE_c15910	COG1716	ATPase activity
ARUE_c15960	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
ARUE_c15980	COG1940	carbohydrate kinase activity
ARUE_c16030	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
ARUE_c16040	COG2815	serine threonine protein kinase
ARUE_c16040	COG0515	serine threonine protein kinase
ARUE_c16050	COG1388	LysM domain
ARUE_c16050	COG3942	CHAP domain
ARUE_c16120	COG2001	Belongs to the MraZ family
ARUE_c16130	COG0275	rRNA processing
ARUE_c16150	COG0768	penicillin binding
ARUE_c16170	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ARUE_c16180	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ARUE_c16190	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ARUE_c16210	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ARUE_c16220	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ARUE_c16240	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ARUE_c16260	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ARUE_c16270	COG1799	cell septum assembly
ARUE_c16300	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ARUE_c16350	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ARUE_c16360	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ARUE_c16370	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c16410	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
ARUE_c16420	COG0174	glutamine synthetase
ARUE_c16430	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ARUE_c16510	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ARUE_c16520	COG0321	lipoyl(octanoyl) transferase activity
ARUE_c16550	COG4946	Tricorn protease homolog
ARUE_c16550	COG0793	Belongs to the peptidase S41A family
ARUE_c16560	COG1764	response to oxidative stress
ARUE_c16590	COG0508	dehydrogenase complex catalyzes the overall conversion of
ARUE_c16600	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ARUE_c16610	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ARUE_c16650	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ARUE_c16720	COG1271	oxidase subunit
ARUE_c16730	COG1294	oxidase, subunit
ARUE_c16740	COG4988	ABC transporter
ARUE_c16780	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ARUE_c16790	COG1042	CoA-binding domain protein
ARUE_c16790	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ARUE_c16790	COG0045	succinate-CoA ligase (ADP-forming) activity
ARUE_c16820	COG1435	thymidine kinase activity
ARUE_c16860	COG0756	dUTP diphosphatase activity
ARUE_c16910	COG0569	domain protein
ARUE_c16920	COG0531	amino acid
ARUE_c16930	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ARUE_c16940	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ARUE_c16950	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ARUE_c16990	COG0667	Aldo Keto reductase
ARUE_c17000	COG1250	3-hydroxyacyl-CoA dehydrogenase
ARUE_c17000	COG1024	Enoyl-CoA hydratase
ARUE_c17010	COG0183	Belongs to the thiolase family
ARUE_c17070	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ARUE_c17100	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ARUE_c17130	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ARUE_c17140	COG3135	benzoate transporter
ARUE_c17160	COG0531	amino acid
ARUE_c17230	COG0242	peptide deformylase activity
ARUE_c17240	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ARUE_c17260	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ARUE_c17300	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ARUE_c17300	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ARUE_c17320	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ARUE_c17330	COG0140	phosphoribosyl-ATP diphosphatase activity
ARUE_c17340	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ARUE_c17350	COG0107	imidazoleglycerol-phosphate synthase activity
ARUE_c17370	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ARUE_c17410	COG0134	indole-3-glycerol-phosphate synthase activity
ARUE_c17420	COG0133	tryptophan synthase activity
ARUE_c17430	COG0159	tryptophan synthase activity
ARUE_c17440	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ARUE_c17450	COG0070	glutamate synthase
ARUE_c17450	COG0069	glutamate synthase activity
ARUE_c17450	COG0067	glutamate synthase
ARUE_c17700	COG0395	ABC-type sugar transport system, permease component
ARUE_c17710	COG3622	Belongs to the hyi family
ARUE_c17780	COG0673	inositol 2-dehydrogenase activity
ARUE_c17800	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c17830	COG1940	carbohydrate kinase activity
ARUE_c17840	COG0673	inositol 2-dehydrogenase activity
ARUE_c17870	COG0179	Fumarylacetoacetate (FAA) hydrolase
ARUE_c17890	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ARUE_c17910	COG0179	Fumarylacetoacetate (FAA) hydrolase
ARUE_c17920	COG0477	Major facilitator Superfamily
ARUE_c18050	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ARUE_c18070	COG0145	ligase activity
ARUE_c18100	COG3962	Belongs to the TPP enzyme family
ARUE_c18110	COG1012	belongs to the aldehyde dehydrogenase family
ARUE_c18120	COG0673	inositol 2-dehydrogenase activity
ARUE_c18140	COG0129	dihydroxy-acid dehydratase activity
ARUE_c18150	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ARUE_c18160	COG0531	amino acid
ARUE_c18170	COG0673	inositol 2-dehydrogenase activity
ARUE_c18190	COG1172	Belongs to the binding-protein-dependent transport system permease family
ARUE_c18210	COG0247	lactate metabolic process
ARUE_c18210	COG0277	FAD linked oxidase domain protein
ARUE_c18320	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ARUE_c18330	COG0477	Major facilitator Superfamily
ARUE_c18340	COG1309	transcriptional regulator
ARUE_c18360	COG1063	alcohol dehydrogenase
ARUE_c18370	COG0179	Fumarylacetoacetate (FAA) hydrolase
ARUE_c18400	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c18420	COG0129	dihydroxy-acid dehydratase activity
ARUE_c18490	COG0395	ABC-type sugar transport system, permease component
ARUE_c18510	COG4608	Belongs to the ABC transporter superfamily
ARUE_c18560	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c18600	COG2084	Dehydrogenase
ARUE_c18610	COG1082	Xylose isomerase domain protein TIM barrel
ARUE_c18620	COG0149	triose-phosphate isomerase activity
ARUE_c18630	COG0698	ribose 5-phosphate isomerase
ARUE_c18640	COG2376	Dihydroxyacetone kinase
ARUE_c18660	COG2186	Transcriptional regulator
ARUE_c18680	COG2211	Major facilitator Superfamily
ARUE_c18720	COG1472	Belongs to the glycosyl hydrolase 3 family
ARUE_c18760	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c18770	COG1309	transcriptional regulator
ARUE_c18780	COG1024	Enoyl-CoA hydratase
ARUE_c18800	COG1309	transcriptional regulator
ARUE_c18820	COG1012	belongs to the aldehyde dehydrogenase family
ARUE_c19000	COG0183	Belongs to the thiolase family
ARUE_c19100	COG3123	guanosine phosphorylase activity
ARUE_c19150	COG1473	amidohydrolase
ARUE_c19200	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ARUE_c19250	COG0395	ABC-type sugar transport system, permease component
ARUE_c19270	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ARUE_c19300	COG3842	ATPase activity
ARUE_c19330	COG1131	(ABC) transporter
ARUE_c19380	COG1131	(ABC) transporter
ARUE_c19400	COG0655	NAD(P)H dehydrogenase (quinone) activity
ARUE_c19470	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ARUE_c19580	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ARUE_c19610	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ARUE_c19620	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
ARUE_c19650	COG1760	l-serine dehydratase
ARUE_c19680	COG2814	Major facilitator Superfamily
ARUE_c19750	COG0800	Aldolase
ARUE_c19770	COG1609	Transcriptional regulator
ARUE_c19850	COG0395	ABC-type sugar transport system, permease component
ARUE_c19910	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ARUE_c19950	COG0656	L-ascorbic acid biosynthetic process
ARUE_c20000	COG1063	alcohol dehydrogenase
ARUE_c20030	COG2199	diguanylate cyclase activity
ARUE_c20030	COG2200	EAL domain
ARUE_c20030	COG3287	FIST C domain
ARUE_c20080	COG0443	Heat shock 70 kDa protein
ARUE_c20090	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ARUE_c20120	COG0542	response to heat
ARUE_c20130	COG3118	belongs to the thioredoxin family
ARUE_c20170	COG1940	carbohydrate kinase activity
ARUE_c20180	COG0673	inositol 2-dehydrogenase activity
ARUE_c20200	COG1172	Belongs to the binding-protein-dependent transport system permease family
ARUE_c20210	COG1879	ABC-type sugar transport system periplasmic component
ARUE_c20220	COG1082	Xylose isomerase domain protein TIM barrel
ARUE_c20230	COG1082	Xylose isomerase domain protein TIM barrel
ARUE_c20240	COG1129	ABC transporter
ARUE_c20280	COG3654	unkown
ARUE_c20290	COG2207	Transcriptional regulator
ARUE_c20300	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ARUE_c20320	COG1472	Belongs to the glycosyl hydrolase 3 family
ARUE_c20330	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ARUE_c20350	COG1063	alcohol dehydrogenase
ARUE_c20370	COG1850	ribulose-bisphosphate carboxylase activity
ARUE_c20390	COG2186	Transcriptional regulator
ARUE_c20460	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ARUE_c20480	COG3842	ATPase activity
ARUE_c20520	COG0477	Major facilitator Superfamily
ARUE_c20530	COG2175	clavaminate synthase activity
ARUE_c20550	COG2080	2 iron, 2 sulfur cluster binding
ARUE_c20620	COG2267	carboxylic ester hydrolase activity
ARUE_c20630	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c20690	COG1846	Transcriptional regulator
ARUE_c20700	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
ARUE_c20780	COG0464	growth
ARUE_c20790	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ARUE_c20800	COG0436	Aminotransferase
ARUE_c20820	COG2354	Protein conserved in bacteria
ARUE_c20850	COG0747	negative chemotaxis
ARUE_c20860	COG0601	transmembrane transport
ARUE_c20870	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ARUE_c20880	COG0444	Belongs to the ABC transporter superfamily
ARUE_c20890	COG4608	Belongs to the ABC transporter superfamily
ARUE_c20910	COG1621	beta-fructofuranosidase activity
ARUE_c20930	COG3842	ATPase activity
ARUE_c20940	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ARUE_c20990	COG2828	Protein conserved in bacteria
ARUE_c21020	COG0583	DNA-binding transcription factor activity
ARUE_c21100	COG1802	Transcriptional regulator
ARUE_c21140	COG1126	abc transporter atp-binding protein
ARUE_c21180	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ARUE_c21190	COG1012	belongs to the aldehyde dehydrogenase family
ARUE_c21200	COG0473	3-isopropylmalate dehydrogenase activity
ARUE_c21220	COG0747	negative chemotaxis
ARUE_c21240	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ARUE_c21250	COG4172	Belongs to the ABC transporter superfamily
ARUE_c21290	COG1942	4-Oxalocrotonate Tautomerase
ARUE_c21300	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ARUE_c21320	COG3962	Belongs to the TPP enzyme family
ARUE_c21350	COG0673	inositol 2-dehydrogenase activity
ARUE_c21360	COG1082	Xylose isomerase domain protein TIM barrel
ARUE_c21370	COG0673	inositol 2-dehydrogenase activity
ARUE_c21400	COG1609	Transcriptional regulator
ARUE_c21420	COG1172	Belongs to the binding-protein-dependent transport system permease family
ARUE_c21440	COG0673	inositol 2-dehydrogenase activity
ARUE_c21450	COG0673	inositol 2-dehydrogenase activity
ARUE_c21460	COG0673	inositol 2-dehydrogenase activity
ARUE_c21470	COG0673	inositol 2-dehydrogenase activity
ARUE_c21480	COG3718	enzyme involved in inositol metabolism
ARUE_c21510	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ARUE_c21520	COG0318	PFAM AMP-dependent synthetase and ligase
ARUE_c21530	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ARUE_c21540	COG0531	amino acid
ARUE_c21580	COG1278	Cold shock
ARUE_c21590	COG0475	glutathione-regulated potassium exporter activity
ARUE_c21610	COG3285	dna ligase
ARUE_c21610	COG1793	dna ligase
ARUE_c21630	COG0028	Belongs to the TPP enzyme family
ARUE_c21690	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
ARUE_c21780	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ARUE_c21800	COG3552	Protein containing von Willebrand factor type A (VWA) domain
ARUE_c21820	COG0714	Associated with various cellular activities
ARUE_c21860	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ARUE_c21890	COG3795	YCII-related domain
ARUE_c21900	COG4941	Belongs to the sigma-70 factor family
ARUE_c21940	COG1064	alcohol dehydrogenase
ARUE_c21950	COG1643	Atp-dependent helicase
ARUE_c21960	COG1228	amidohydrolase
ARUE_c22040	COG0009	L-threonylcarbamoyladenylate synthase
ARUE_c22080	COG2971	BadF BadG BcrA BcrD
ARUE_c22100	COG2188	Transcriptional regulator
ARUE_c22130	COG3483	tryptophan 2,3-dioxygenase activity
ARUE_c22190	COG2050	protein possibly involved in aromatic compounds catabolism
ARUE_c22240	COG0539	negative regulation of cytoplasmic translation
ARUE_c22250	COG1739	Uncharacterized protein family UPF0029
ARUE_c22260	COG0237	dephospho-CoA kinase activity
ARUE_c22260	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ARUE_c22270	COG0556	nucleotide-excision repair
ARUE_c22280	COG0861	Integral membrane protein TerC family
ARUE_c22340	COG4106	trans-aconitate 2-methyltransferase activity
ARUE_c22380	COG0546	phosphoglycolate phosphatase activity
ARUE_c22400	COG0322	excinuclease ABC activity
ARUE_c22410	COG1660	Displays ATPase and GTPase activities
ARUE_c22430	COG1481	regulation of sporulation
ARUE_c22440	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ARUE_c22450	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ARUE_c22460	COG0126	phosphoglycerate kinase activity
ARUE_c22470	COG0149	triose-phosphate isomerase activity
ARUE_c22480	COG0363	glucosamine-6-phosphate deaminase activity
ARUE_c22510	COG0166	Belongs to the GPI family
ARUE_c22520	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ARUE_c22540	COG0109	protoheme IX farnesyltransferase activity
ARUE_c22560	COG1612	heme a metabolic process
ARUE_c22570	COG0842	Transport permease protein
ARUE_c22610	COG0719	Fe-S assembly protein
ARUE_c22630	COG0396	ATPase activity
ARUE_c22640	COG2151	metal-sulfur cluster biosynthetic enzyme
ARUE_c22660	COG0318	PFAM AMP-dependent synthetase and ligase
ARUE_c22690	COG1122	ATPase activity
ARUE_c22700	COG1268	BioY protein
ARUE_c22710	COG0488	(ABC) transporter
ARUE_c22760	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c22770	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c22780	COG1129	ABC transporter
ARUE_c22800	COG0560	Phosphoserine phosphatase
ARUE_c22800	COG3830	Belongs to the UPF0237 family
ARUE_c22810	COG1119	ATPase activity
ARUE_c22840	COG0254	rRNA binding
ARUE_c22850	COG0095	Lipoate-protein ligase
ARUE_c22870	COG2855	membrane
ARUE_c22900	COG1305	Transglutaminase-like
ARUE_c22920	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
ARUE_c22930	COG0297	glycogen (starch) synthase activity
ARUE_c22960	COG0183	Belongs to the thiolase family
ARUE_c22970	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c23000	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ARUE_c23040	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ARUE_c23070	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ARUE_c23100	COG1215	transferase activity, transferring glycosyl groups
ARUE_c23150	COG0438	transferase activity, transferring glycosyl groups
ARUE_c23200	COG1088	dTDP-glucose 4,6-dehydratase activity
ARUE_c23210	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
ARUE_c23220	COG0667	Aldo Keto reductase
ARUE_c23230	COG1968	undecaprenyl-diphosphatase activity
ARUE_c23240	COG0215	cysteine-tRNA ligase activity
ARUE_c23260	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ARUE_c23270	COG1994	Peptidase M50
ARUE_c23270	COG0517	IMP dehydrogenase activity
ARUE_c23290	COG1222	aaa ATPase
ARUE_c23300	COG4122	O-methyltransferase activity
ARUE_c23320	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
ARUE_c23330	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
ARUE_c23340	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
ARUE_c23350	COG0545	Peptidyl-prolyl cis-trans isomerase
ARUE_c23390	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ARUE_c23400	COG0805	protein transport
ARUE_c23410	COG4581	dead DEAH box helicase
ARUE_c23420	COG1574	metal-dependent hydrolase with the TIM-barrel fold
ARUE_c23430	COG1216	Glycosyl transferase, family 2
ARUE_c23480	COG0823	Involved in the tonB-independent uptake of proteins
ARUE_c23480	COG1506	peptidase
ARUE_c23480	COG4946	Tricorn protease homolog
ARUE_c23490	COG0242	peptide deformylase activity
ARUE_c23520	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ARUE_c23530	COG3424	synthase
ARUE_c23540	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ARUE_c23610	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ARUE_c23620	COG1845	cytochrome c oxidase, subunit III
ARUE_c23630	COG2010	Cytochrome c
ARUE_c23640	COG0723	plastoquinol--plastocyanin reductase activity
ARUE_c23650	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
ARUE_c23660	COG2188	Transcriptional regulator
ARUE_c23670	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ARUE_c23690	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ARUE_c23700	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ARUE_c23720	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ARUE_c23740	COG0167	dihydroorotate dehydrogenase activity
ARUE_c23770	COG2267	carboxylic ester hydrolase activity
ARUE_c23780	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ARUE_c23790	COG1381	Involved in DNA repair and RecF pathway recombination
ARUE_c23800	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ARUE_c23810	COG3590	peptidase
ARUE_c23820	COG1316	TRANSCRIPTIONal
ARUE_c23830	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ARUE_c23850	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ARUE_c23880	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ARUE_c23890	COG0484	heat shock protein binding
ARUE_c23900	COG1420	regulation of RNA biosynthetic process
ARUE_c23940	COG0481	GTPase activity
ARUE_c23960	COG0268	Binds directly to 16S ribosomal RNA
ARUE_c24000	COG1307	EDD domain protein, DegV family
ARUE_c24010	COG0495	leucyl-tRNA aminoacylation
ARUE_c24020	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ARUE_c24030	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
ARUE_c24040	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ARUE_c24050	COG2390	Transcriptional regulator
ARUE_c24060	COG0656	L-ascorbic acid biosynthetic process
ARUE_c24080	COG0438	transferase activity, transferring glycosyl groups
ARUE_c24140	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ARUE_c24160	COG1758	RNA polymerase activity
ARUE_c24170	COG0194	GDP metabolic process
ARUE_c24190	COG0284	orotidine-5'-phosphate decarboxylase activity
ARUE_c24200	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ARUE_c24210	COG0505	Belongs to the CarA family
ARUE_c24230	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ARUE_c24240	COG0540	Belongs to the ATCase OTCase family
ARUE_c24250	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
ARUE_c24270	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ARUE_c24280	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ARUE_c24300	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ARUE_c24310	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ARUE_c24320	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ARUE_c24330	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ARUE_c24350	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ARUE_c24360	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ARUE_c24390	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ARUE_c24430	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ARUE_c24440	COG0124	histidyl-tRNA synthetase
ARUE_c24460	COG1196	nuclear chromosome segregation
ARUE_c24480	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ARUE_c24490	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ARUE_c24500	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ARUE_c24520	COG2255	four-way junction helicase activity
ARUE_c24530	COG0632	four-way junction helicase activity
ARUE_c24540	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
ARUE_c24550	COG0217	transcriptional regulatory protein
ARUE_c24560	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
ARUE_c24570	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ARUE_c24600	COG0339	signal peptide processing
ARUE_c24610	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
ARUE_c24640	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ARUE_c24650	COG0587	DNA-directed DNA polymerase activity
ARUE_c24700	COG2135	peptidase activity
ARUE_c24730	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ARUE_c24790	COG0644	oxidoreductase
ARUE_c24810	COG4804	nuclease activity
ARUE_c24820	COG0412	Dienelactone hydrolase
ARUE_c24830	COG1131	(ABC) transporter
ARUE_c24860	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c24870	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ARUE_c24880	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ARUE_c24900	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ARUE_c24910	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ARUE_c24930	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ARUE_c24940	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ARUE_c24950	COG1780	Probably involved in ribonucleotide reductase function
ARUE_c24970	COG0583	DNA-binding transcription factor activity
ARUE_c25040	COG0714	Associated with various cellular activities
ARUE_c25060	COG1175	transmembrane transport
ARUE_c25080	COG1940	carbohydrate kinase activity
ARUE_c25080	COG1846	Transcriptional regulator
ARUE_c25090	COG2813	Specifically methylates the guanine in position
ARUE_c25140	COG0799	negative regulation of ribosome biogenesis
ARUE_c25160	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ARUE_c25180	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ARUE_c25190	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ARUE_c25200	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ARUE_c25210	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ARUE_c25220	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ARUE_c25230	COG0351	phosphomethylpyrimidine kinase
ARUE_c25230	COG0352	thiamine-phosphate diphosphorylase activity
ARUE_c25230	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ARUE_c25240	COG1530	ribonuclease E activity
ARUE_c25260	COG0105	UTP biosynthetic process
ARUE_c25280	COG0285	dihydrofolate synthase activity
ARUE_c25290	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ARUE_c25320	COG0525	valine-tRNA ligase activity
ARUE_c25330	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ARUE_c25340	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ARUE_c25350	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ARUE_c25360	COG0740	serine-type endopeptidase activity
ARUE_c25370	COG0740	serine-type endopeptidase activity
ARUE_c25390	COG0544	peptidyl-prolyl cis-trans isomerase activity
ARUE_c25470	COG0668	transmembrane transport
ARUE_c25500	COG1946	Acyl-CoA thioesterase
ARUE_c25620	COG0242	peptide deformylase activity
ARUE_c25670	COG3022	response to hydroperoxide
ARUE_c25690	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ARUE_c25700	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ARUE_c25720	COG1045	serine acetyltransferase
ARUE_c25730	COG0300	oxidoreductase activity
ARUE_c25740	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
ARUE_c25760	COG1063	alcohol dehydrogenase
ARUE_c25770	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c25810	COG0477	Major facilitator Superfamily
ARUE_c25880	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
ARUE_c25910	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ARUE_c25920	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ARUE_c25970	COG0606	chelatase, subunit chli
ARUE_c25980	COG0792	nuclease activity
ARUE_c26000	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ARUE_c26020	COG0681	Belongs to the peptidase S26 family
ARUE_c26030	COG0335	large ribosomal subunit rRNA binding
ARUE_c26040	COG0336	Belongs to the RNA methyltransferase TrmD family
ARUE_c26050	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ARUE_c26060	COG1837	Belongs to the UPF0109 family
ARUE_c26070	COG0228	four-way junction DNA binding
ARUE_c26090	COG2514	catechol 2,3-dioxygenase activity
ARUE_c26170	COG2814	Major facilitator Superfamily
ARUE_c26240	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ARUE_c26250	COG0571	ribonuclease III activity
ARUE_c26260	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ARUE_c26280	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ARUE_c26310	COG0742	ribosomal rna small subunit methyltransferase
ARUE_c26360	COG1181	Belongs to the D-alanine--D-alanine ligase family
ARUE_c26370	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ARUE_c26390	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ARUE_c26400	COG0066	3-isopropylmalate dehydratase activity
ARUE_c26410	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ARUE_c26420	COG1414	Transcriptional regulator
ARUE_c26490	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ARUE_c26510	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ARUE_c26520	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ARUE_c26530	COG0473	3-isopropylmalate dehydrogenase activity
ARUE_c26540	COG4585	Histidine kinase
ARUE_c26550	COG2197	response regulator
ARUE_c26560	COG0577	efflux transmembrane transporter activity
ARUE_c26560	COG1136	(ABC) transporter
ARUE_c26590	COG0577	efflux transmembrane transporter activity
ARUE_c26590	COG1136	(ABC) transporter
ARUE_c26610	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ARUE_c26620	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ARUE_c26630	COG0440	acetolactate synthase activity
ARUE_c26650	COG0129	dihydroxy-acid dehydratase activity
ARUE_c26680	COG2133	pyrroloquinoline quinone binding
ARUE_c26740	COG0747	negative chemotaxis
ARUE_c26750	COG0579	oxidoreductase
ARUE_c26760	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ARUE_c26770	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ARUE_c26790	COG1305	Transglutaminase-like
ARUE_c26860	COG1104	cysteine desulfurase activity
ARUE_c26880	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
ARUE_c26890	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ARUE_c26910	COG1522	sequence-specific DNA binding
ARUE_c26920	COG1113	amino acid transport
ARUE_c26940	COG0022	dehydrogenase e1 component
ARUE_c26950	COG0508	dehydrogenase complex catalyzes the overall conversion of
ARUE_c26990	COG0477	Major facilitator Superfamily
ARUE_c27000	COG1414	Transcriptional regulator
ARUE_c27020	COG0531	amino acid
ARUE_c27050	COG1116	anion transmembrane transporter activity
ARUE_c27060	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ARUE_c27090	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ARUE_c27120	COG0419	ATPase involved in DNA repair
ARUE_c27130	COG0420	3'-5' exonuclease activity
ARUE_c27160	COG2149	membrane
ARUE_c27210	COG1131	(ABC) transporter
ARUE_c27240	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ARUE_c27250	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
ARUE_c27260	COG1234	tRNA 3'-trailer cleavage
ARUE_c27270	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ARUE_c27290	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ARUE_c27310	COG1335	isochorismatase
ARUE_c27340	COG0363	glucosamine-6-phosphate deaminase activity
ARUE_c27370	COG1902	pentaerythritol trinitrate reductase activity
ARUE_c27430	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
ARUE_c27440	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ARUE_c27460	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
ARUE_c27470	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ARUE_c27490	COG0355	proton-transporting ATP synthase activity, rotational mechanism
ARUE_c27500	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ARUE_c27510	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ARUE_c27520	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ARUE_c27530	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ARUE_c27540	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ARUE_c27550	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ARUE_c27560	COG0356	it plays a direct role in the translocation of protons across the membrane
ARUE_c27590	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ARUE_c27600	COG1215	transferase activity, transferring glycosyl groups
ARUE_c27620	COG0009	L-threonylcarbamoyladenylate synthase
ARUE_c27630	COG2890	protein-(glutamine-N5) methyltransferase activity
ARUE_c27640	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ARUE_c27660	COG0083	homoserine kinase activity
ARUE_c27670	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ARUE_c27680	COG0460	homoserine dehydrogenase
ARUE_c27690	COG0019	diaminopimelate decarboxylase activity
ARUE_c27700	COG0018	arginyl-trna synthetase
ARUE_c27730	COG1017	nitric oxide dioxygenase activity
ARUE_c27730	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ARUE_c27800	COG1643	Atp-dependent helicase
ARUE_c27810	COG0537	adenosine 5'-monophosphoramidase activity
ARUE_c27820	COG1064	alcohol dehydrogenase
ARUE_c27850	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
ARUE_c27870	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ARUE_c27880	COG1121	(ABC) transporter
ARUE_c27890	COG0803	Belongs to the bacterial solute-binding protein 9 family
ARUE_c27910	COG1253	flavin adenine dinucleotide binding
ARUE_c27920	COG0508	dehydrogenase complex catalyzes the overall conversion of
ARUE_c27920	COG0567	Dehydrogenase, E1 component
ARUE_c27980	COG1595	DNA-templated transcription, initiation
ARUE_c28000	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ARUE_c28020	COG0483	inositol monophosphate 1-phosphatase activity
ARUE_c28030	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ARUE_c28080	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ARUE_c28090	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ARUE_c28100	COG0739	heme binding
ARUE_c28110	COG2177	Part of the ABC transporter FtsEX involved in
ARUE_c28120	COG2884	Cell division ATP-binding protein ftsE
ARUE_c28130	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ARUE_c28310	COG1216	Glycosyl transferase, family 2
ARUE_c28340	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ARUE_c28390	COG2902	Dehydrogenase
ARUE_c28450	COG0653	protein targeting
ARUE_c28460	COG3214	Protein conserved in bacteria
ARUE_c28470	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
ARUE_c28480	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ARUE_c28490	COG5401	PFAM Sporulation and spore germination
ARUE_c28500	COG5002	protein histidine kinase activity
ARUE_c28550	COG0714	Associated with various cellular activities
ARUE_c28610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ARUE_c28620	COG0601	transmembrane transport
ARUE_c28640	COG0482	sulfurtransferase activity
ARUE_c28700	COG0484	heat shock protein binding
ARUE_c28710	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ARUE_c28750	COG3265	gluconokinase activity
ARUE_c28770	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ARUE_c28780	COG2086	electron transfer activity
ARUE_c28790	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ARUE_c28810	COG1842	Phage shock protein A
ARUE_c28820	COG2188	Transcriptional regulator
ARUE_c28850	COG1615	UPF0182 protein
ARUE_c28860	COG3480	Lon protease (S16) C-terminal proteolytic domain
ARUE_c28900	COG2816	NAD+ diphosphatase activity
ARUE_c28960	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ARUE_c28970	COG0765	amino acid transport
ARUE_c28980	COG1126	abc transporter atp-binding protein
ARUE_c28990	COG1472	Belongs to the glycosyl hydrolase 3 family
ARUE_c29000	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ARUE_c29020	COG0113	porphobilinogen synthase activity
ARUE_c29040	COG0181	hydroxymethylbilane synthase activity
ARUE_c29080	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ARUE_c29090	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ARUE_c29110	COG1309	transcriptional regulator
ARUE_c29170	COG2022	thiamine diphosphate biosynthetic process
ARUE_c29170	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ARUE_c29180	COG0352	thiamine-phosphate diphosphorylase activity
ARUE_c29220	COG0513	Belongs to the DEAD box helicase family
ARUE_c29240	COG2095	MarC family integral membrane protein
ARUE_c29260	COG0006	proline dipeptidase activity
ARUE_c29280	COG2239	Acts as a magnesium transporter
ARUE_c29310	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ARUE_c29330	COG1595	DNA-templated transcription, initiation
ARUE_c29380	COG1126	abc transporter atp-binding protein
ARUE_c29390	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ARUE_c29400	COG0765	amino acid transport
ARUE_c29410	COG0765	amino acid transport
ARUE_c29420	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ARUE_c29430	COG2171	N-acyltransferase activity
ARUE_c29460	COG3226	Transcriptional regulator
ARUE_c29470	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ARUE_c29560	COG0601	transmembrane transport
ARUE_c29580	COG4166	transmembrane transport
ARUE_c29600	COG0012	GTP binding
ARUE_c29610	COG1322	Protein conserved in bacteria
ARUE_c29620	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ARUE_c29640	COG1570	exodeoxyribonuclease VII activity
ARUE_c29650	COG1722	exodeoxyribonuclease VII activity
ARUE_c29660	COG2326	polyphosphate kinase activity
ARUE_c29700	COG1174	glycine betaine transport
ARUE_c29720	COG1162	GTPase activity
ARUE_c29770	COG2971	BadF BadG BcrA BcrD
ARUE_c29790	COG0583	DNA-binding transcription factor activity
ARUE_c29800	COG2814	Major facilitator Superfamily
ARUE_c29810	COG3548	integral membrane protein
ARUE_c29860	COG0598	Magnesium transport protein CorA
ARUE_c29880	COG1528	Iron-storage protein
ARUE_c29890	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ARUE_c29900	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ARUE_c29920	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ARUE_c29930	COG1695	Transcriptional regulator
ARUE_c30050	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ARUE_c30060	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ARUE_c30100	COG0519	Catalyzes the synthesis of GMP from XMP
ARUE_c30100	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ARUE_c30140	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ARUE_c30180	COG0516	GMP reductase activity
ARUE_c30190	COG1132	(ABC) transporter
ARUE_c30230	COG2072	flavoprotein involved in K transport
ARUE_c30250	COG2197	response regulator
ARUE_c30260	COG0459	protein refolding
ARUE_c30270	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ARUE_c30300	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ARUE_c30320	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
ARUE_c30340	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ARUE_c30350	COG0456	acetyltransferase
ARUE_c30370	COG0802	atpase or kinase
ARUE_c30380	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ARUE_c30400	COG1486	melibiose metabolic process
ARUE_c30420	COG0438	transferase activity, transferring glycosyl groups
ARUE_c30430	COG2759	Belongs to the formate--tetrahydrofolate ligase family
ARUE_c30450	COG0667	Aldo Keto reductase
ARUE_c30500	COG0736	holo-[acyl-carrier-protein] synthase activity
ARUE_c30520	COG1072	(Pantothenic acid kinase))
ARUE_c30540	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ARUE_c30550	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ARUE_c30560	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ARUE_c30610	COG0455	bacterial-type flagellum organization
ARUE_c30650	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ARUE_c30660	COG0101	tRNA pseudouridine synthase activity
ARUE_c30670	COG0203	ribosomal protein L17
ARUE_c30680	COG0202	RNA polymerase activity
ARUE_c30690	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ARUE_c30700	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ARUE_c30710	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ARUE_c30720	COG3191	aminopeptidase activity
ARUE_c30760	COG0024	Methionine aminopeptidase
ARUE_c30770	COG0563	adenylate kinase activity
ARUE_c30790	COG0200	Binds to the 23S rRNA
ARUE_c30800	COG1841	ribosomal large subunit assembly
ARUE_c30810	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ARUE_c30830	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ARUE_c30840	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ARUE_c30850	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ARUE_c30860	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ARUE_c30870	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ARUE_c30880	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ARUE_c30890	COG0255	Belongs to the universal ribosomal protein uL29 family
ARUE_c30900	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ARUE_c30910	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ARUE_c30920	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ARUE_c30930	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ARUE_c30940	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ARUE_c30950	COG0089	rRNA binding
ARUE_c30960	COG0088	Forms part of the polypeptide exit tunnel
ARUE_c30970	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ARUE_c30980	COG0051	transcription antitermination factor activity, RNA binding
ARUE_c31010	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ARUE_c31020	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ARUE_c31030	COG0049	tRNA binding
ARUE_c31040	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ARUE_c31050	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ARUE_c31060	COG0085	RNA polymerase activity
ARUE_c31070	COG0183	Belongs to the thiolase family
ARUE_c31080	COG0442	prolyl-tRNA aminoacylation
ARUE_c31090	COG0222	ribosome binding
ARUE_c31100	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ARUE_c31130	COG0081	regulation of translation
ARUE_c31140	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ARUE_c31160	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ARUE_c31180	COG0436	Aminotransferase
ARUE_c31190	COG2197	response regulator
ARUE_c31290	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ARUE_c31310	COG3485	protocatechuate 3,4-dioxygenase
ARUE_c31330	COG0745	RESPONSE REGULATOR receiver
ARUE_c31340	COG0456	acetyltransferase
ARUE_c31350	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
ARUE_c31400	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
ARUE_c31410	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ARUE_c31430	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ARUE_c31470	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ARUE_c31480	COG0738	Major facilitator superfamily
ARUE_c31490	COG2030	dehydratase
ARUE_c31500	COG2030	dehydratase
ARUE_c31560	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ARUE_c31580	COG4989	oxidoreductase activity
ARUE_c31590	COG0366	Alpha amylase catalytic
ARUE_c31630	COG1940	carbohydrate kinase activity
ARUE_c31680	COG1652	LysM domain
ARUE_c31750	COG0754	glutathionylspermidine amidase activity
ARUE_c31770	COG1960	acyl-CoA dehydrogenase activity
ARUE_c31810	COG0395	ABC-type sugar transport system, permease component
ARUE_c31840	COG1733	regulation of RNA biosynthetic process
ARUE_c31920	COG0318	PFAM AMP-dependent synthetase and ligase
ARUE_c31940	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ARUE_c31960	COG1131	(ABC) transporter
ARUE_c32000	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ARUE_c32030	COG1666	GTP binding
ARUE_c32040	COG0501	Belongs to the peptidase M48B family
ARUE_c32100	COG0531	amino acid
ARUE_c32190	COG1012	belongs to the aldehyde dehydrogenase family
ARUE_c32200	COG3835	regulator
ARUE_c32210	COG2807	transmembrane transport
ARUE_c32220	COG2186	Transcriptional regulator
ARUE_c32230	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ARUE_c32230	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ARUE_c32250	COG1648	precorrin-2 dehydrogenase activity
ARUE_c32250	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ARUE_c32270	COG2066	Belongs to the glutaminase family
ARUE_c32290	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ARUE_c32340	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ARUE_c32350	COG1116	anion transmembrane transporter activity
ARUE_c32370	COG2040	homocysteine
ARUE_c32410	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ARUE_c32500	COG2860	membrane
ARUE_c32550	COG2226	methyltransferase
ARUE_c32560	COG1169	isochorismate synthase
ARUE_c32570	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ARUE_c32580	COG0765	amino acid transport
ARUE_c32600	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
ARUE_c32630	COG4948	Mandelate Racemase Muconate Lactonizing
ARUE_c32670	COG1609	Transcriptional regulator
ARUE_c32690	COG0395	ABC-type sugar transport system, permease component
ARUE_c32700	COG1175	transmembrane transport
ARUE_c32750	COG1404	Belongs to the peptidase S8 family
ARUE_c32890	COG1404	Belongs to the peptidase S8 family
ARUE_c32920	COG0662	Cupin 2, conserved barrel domain protein
ARUE_c32960	COG1733	regulation of RNA biosynthetic process
ARUE_c32980	COG0508	dehydrogenase complex catalyzes the overall conversion of
ARUE_c32990	COG0022	dehydrogenase e1 component
ARUE_c33050	COG0489	protein tyrosine kinase activity
ARUE_c33120	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
ARUE_c33130	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ARUE_c33140	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ARUE_c33150	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ARUE_c33190	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ARUE_c33220	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
ARUE_c33220	COG2755	lipolytic protein G-D-S-L family
ARUE_c33240	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ARUE_c33280	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ARUE_c33450	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ARUE_c33560	COG3979	chitinase
ARUE_c33590	COG1024	Enoyl-CoA hydratase
ARUE_c33600	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ARUE_c33610	COG2151	metal-sulfur cluster biosynthetic enzyme
ARUE_c33620	COG3396	Phenylacetate-CoA oxygenase
ARUE_c33630	COG3460	Phenylacetate-CoA oxygenase
ARUE_c33640	COG3396	Phenylacetate-CoA oxygenase
ARUE_c33650	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ARUE_c33660	COG3942	CHAP domain
ARUE_c33660	COG1388	LysM domain
ARUE_c33670	COG1316	TRANSCRIPTIONal
ARUE_c33680	COG0681	Belongs to the peptidase S26 family
ARUE_c33720	COG3706	GGDEF domain
ARUE_c33740	COG4106	trans-aconitate 2-methyltransferase activity
ARUE_c33760	COG5002	protein histidine kinase activity
ARUE_c33800	COG2050	protein possibly involved in aromatic compounds catabolism
ARUE_c33810	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ARUE_c33830	COG1012	belongs to the aldehyde dehydrogenase family
ARUE_c33830	COG2030	dehydratase
ARUE_c33860	COG1216	Glycosyl transferase, family 2
ARUE_c33880	COG1609	Transcriptional regulator
ARUE_c33890	COG2182	Extracellular solute-binding protein
ARUE_c33930	COG0673	inositol 2-dehydrogenase activity
ARUE_c33960	COG1250	3-hydroxyacyl-CoA dehydrogenase
ARUE_c33970	COG1024	Enoyl-CoA hydratase
ARUE_c33980	COG0183	Belongs to the thiolase family
ARUE_c34020	COG2146	nitrite reductase [NAD(P)H] activity
ARUE_c34030	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ARUE_c34050	COG0488	(ABC) transporter
ARUE_c34080	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ARUE_c34090	COG1121	(ABC) transporter
ARUE_c34100	COG0803	Belongs to the bacterial solute-binding protein 9 family
ARUE_c34110	COG1266	CAAX protease self-immunity
ARUE_c34130	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
ARUE_c34240	COG0443	Heat shock 70 kDa protein
ARUE_c34250	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ARUE_c34260	COG1333	cytochrome c biogenesis protein
ARUE_c34270	COG0785	Cytochrome C biogenesis protein
ARUE_c34290	COG0406	alpha-ribazole phosphatase activity
ARUE_c34330	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
ARUE_c34350	COG0560	Phosphoserine phosphatase
ARUE_c34380	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ARUE_c34390	COG3458	cephalosporin-C deacetylase activity
ARUE_c34410	COG2814	Major facilitator Superfamily
ARUE_c34430	COG0395	ABC-type sugar transport system, permease component
ARUE_c34440	COG1175	transmembrane transport
ARUE_c34480	COG0395	ABC-type sugar transport system, permease component
ARUE_c34490	COG1175	transmembrane transport
ARUE_c34510	COG0673	inositol 2-dehydrogenase activity
ARUE_c34540	COG4948	Mandelate Racemase Muconate Lactonizing
ARUE_c34550	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ARUE_c34570	COG0673	inositol 2-dehydrogenase activity
ARUE_c34580	COG1609	Transcriptional regulator
ARUE_c34610	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ARUE_c34620	COG0640	Transcriptional regulator
ARUE_c34630	COG0123	including yeast histone deacetylase and acetoin utilization protein
ARUE_c34640	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ARUE_c34650	COG0569	domain protein
ARUE_c34660	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ARUE_c34680	COG1082	Xylose isomerase domain protein TIM barrel
ARUE_c34690	COG0248	Ppx GppA phosphatase
ARUE_c34710	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ARUE_c34710	COG1754	DNA topoisomerase type I activity
ARUE_c34730	COG2890	protein-(glutamine-N5) methyltransferase activity
ARUE_c34780	COG1205	dead DEAH box helicase
ARUE_c34780	COG1111	helicase
ARUE_c34910	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ARUE_c34920	COG1349	DNA-binding transcription factor activity
ARUE_c34930	COG1136	(ABC) transporter
ARUE_c34930	COG0577	efflux transmembrane transporter activity
ARUE_c34950	COG1609	Transcriptional regulator
ARUE_c34970	COG4209	transmembrane transport
ARUE_c34980	COG0395	ABC-type sugar transport system, permease component
ARUE_c35010	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ARUE_c35070	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ARUE_c35080	COG1408	metallophosphoesterase
ARUE_c35090	COG2409	Drug exporters of the RND superfamily
ARUE_c35100	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ARUE_c35130	COG0667	Aldo Keto reductase
ARUE_c35140	COG1132	(ABC) transporter
ARUE_c35150	COG1132	(ABC) transporter
ARUE_c35180	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
ARUE_c35190	COG0151	Belongs to the GarS family
ARUE_c35220	COG1301	dicarboxylic acid transport
ARUE_c35230	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c35250	COG1953	Uracil, thiamine, allantoin
ARUE_c35260	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
ARUE_c35290	COG0454	-acetyltransferase
ARUE_c35300	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ARUE_c35320	COG3608	succinylglutamate desuccinylase aspartoacylase
ARUE_c35320	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ARUE_c35330	COG2252	PERMEase
ARUE_c35340	COG0590	tRNA wobble adenosine to inosine editing
ARUE_c35400	COG2233	PERMEase
ARUE_c35420	COG1414	Transcriptional regulator
ARUE_c35460	COG3257	ureidoglycine aminohydrolase activity
ARUE_c35490	COG2318	DinB family
ARUE_c35500	COG2271	Major facilitator Superfamily
ARUE_c35530	COG4499	WXG100 protein secretion system (Wss), protein YukC
ARUE_c35530	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ARUE_c35580	COG0659	secondary active sulfate transmembrane transporter activity
ARUE_c35630	COG0563	adenylate kinase activity
ARUE_c35670	COG0477	Major facilitator Superfamily
ARUE_c35690	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ARUE_c35710	COG3401	FG-GAP repeat protein
ARUE_c35780	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ARUE_c35840	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ARUE_c35850	COG1733	regulation of RNA biosynthetic process
ARUE_c35860	COG2267	carboxylic ester hydrolase activity
ARUE_c35920	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ARUE_c35930	COG1024	Enoyl-CoA hydratase
ARUE_c36000	COG0405	Gamma-glutamyltransferase
ARUE_c36080	COG1454	alcohol dehydrogenase
ARUE_c36090	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ARUE_c36140	COG0673	inositol 2-dehydrogenase activity
ARUE_c36170	COG1653	transport
ARUE_c36180	COG1609	Transcriptional regulator
ARUE_c36320	COG3622	Belongs to the hyi family
ARUE_c36330	COG2084	Dehydrogenase
ARUE_c36340	COG3960	tartronate-semialdehyde synthase activity
ARUE_c36350	COG1929	Belongs to the glycerate kinase type-1 family
ARUE_c36360	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ARUE_c36370	COG0745	RESPONSE REGULATOR receiver
ARUE_c36390	COG0745	RESPONSE REGULATOR receiver
ARUE_c36400	COG1215	transferase activity, transferring glycosyl groups
ARUE_c36410	COG1366	Belongs to the anti-sigma-factor antagonist family
ARUE_c36440	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ARUE_c36450	COG2814	Major facilitator Superfamily
ARUE_c36470	COG0671	phosphoesterase, PA-phosphatase related
ARUE_c36520	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ARUE_c36570	COG0542	response to heat
ARUE_c36620	COG3585	molybdate ion transport
ARUE_c36660	COG3304	Inner membrane component domain
ARUE_c36680	COG0135	phosphoribosylanthranilate isomerase activity
ARUE_c36700	COG2076	Multidrug Resistance protein
ARUE_c36710	COG2076	Multidrug Resistance protein
ARUE_c36720	COG0667	Aldo Keto reductase
ARUE_c36770	COG0500	methyltransferase
ARUE_c36800	COG0477	Major facilitator Superfamily
ARUE_c36810	COG2807	transmembrane transport
ARUE_c36830	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ARUE_c36920	COG1131	(ABC) transporter
ARUE_c36960	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ARUE_c36990	COG2188	Transcriptional regulator
ARUE_c37020	COG0154	amidase activity
ARUE_c37030	COG2957	Belongs to the agmatine deiminase family
ARUE_c37100	COG1414	Transcriptional regulator
ARUE_c37110	COG1063	alcohol dehydrogenase
ARUE_c37120	COG3959	Transketolase, thiamine diphosphate binding domain
ARUE_c37130	COG3958	Transketolase
ARUE_c37140	COG1105	Belongs to the carbohydrate kinase PfkB family
ARUE_c37170	COG0477	Major facilitator Superfamily
ARUE_c37180	COG4221	oxidoreductase activity
ARUE_c37190	COG0789	Transcriptional regulator
ARUE_c37200	COG0484	heat shock protein binding
ARUE_c37210	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ARUE_c37220	COG0443	Heat shock 70 kDa protein
ARUE_c37240	COG3739	integral membrane protein
ARUE_c37320	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ARUE_c37350	COG1175	transmembrane transport
ARUE_c37360	COG0395	ABC-type sugar transport system, permease component
ARUE_c37420	COG1609	Transcriptional regulator
ARUE_c37440	COG1653	transport
ARUE_c37470	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ARUE_c37500	COG3540	Alkaline phosphatase
ARUE_c37580	COG3226	Transcriptional regulator
ARUE_c37590	COG1280	lysine exporter protein (LysE YggA)
ARUE_c37630	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ARUE_c37670	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ARUE_c37720	COG2409	Drug exporters of the RND superfamily
ARUE_c37750	COG3795	YCII-related domain
ARUE_c37760	COG4941	Belongs to the sigma-70 factor family
ARUE_c37770	COG0667	Aldo Keto reductase
ARUE_c37790	COG1280	lysine exporter protein (LysE YggA)
ARUE_c37810	COG1609	Transcriptional regulator
ARUE_c37820	COG1957	nucleoside hydrolase
ARUE_c37830	COG0477	Major facilitator Superfamily
ARUE_c37840	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ARUE_c37860	COG1309	transcriptional regulator
ARUE_c37870	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ARUE_c37890	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ARUE_c37910	COG0833	amino acid
ARUE_c37920	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ARUE_c37940	COG2986	histidine ammonia-lyase
ARUE_c38010	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
ARUE_c38020	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ARUE_c38070	COG1122	ATPase activity
ARUE_c38080	COG4721	ABC-type cobalt transport system, permease component
ARUE_c38110	COG1320	monovalent cation:proton antiporter activity
ARUE_c38150	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ARUE_c38150	COG2111	Na H antiporter
ARUE_c38170	COG0490	domain, Protein
ARUE_c38170	COG0471	metal ion transport
ARUE_c38180	COG0475	glutathione-regulated potassium exporter activity
ARUE_c38200	COG0717	Belongs to the dCTP deaminase family
ARUE_c38260	COG0686	Belongs to the AlaDH PNT family
ARUE_c38280	COG0583	DNA-binding transcription factor activity
ARUE_c38310	COG2755	lipolytic protein G-D-S-L family
ARUE_c38310	COG0657	acetylesterase activity
ARUE_c38320	COG1609	Transcriptional regulator
ARUE_c38330	COG0673	inositol 2-dehydrogenase activity
ARUE_c38390	COG2115	Belongs to the xylose isomerase family
ARUE_c38400	COG1070	Carbohydrate kinase
ARUE_c38410	COG1609	Transcriptional regulator
ARUE_c38440	COG2160	L-arabinose isomerase activity
ARUE_c38450	COG2017	converts alpha-aldose to the beta-anomer
ARUE_c38470	COG3254	rhamnose metabolic process
ARUE_c38490	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c38490	COG3347	Dehydrogenase
ARUE_c38500	COG1070	Carbohydrate kinase
ARUE_c38530	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
ARUE_c38550	COG3387	PFAM Glycoside hydrolase 15-related
ARUE_c38560	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ARUE_c38570	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ARUE_c38580	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ARUE_c38670	COG1126	abc transporter atp-binding protein
ARUE_c38710	COG0433	COG0433 Predicted ATPase
ARUE_c38750	COG3336	cytochrome c oxidase
ARUE_c38760	COG0776	regulation of translation
ARUE_c38830	COG3629	intracellular signal transduction
ARUE_c38830	COG3903	Transcriptional regulator
ARUE_c38870	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ARUE_c38880	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ARUE_c38890	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ARUE_c38960	COG1120	ATPase activity
ARUE_c38970	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ARUE_c38980	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ARUE_c39100	COG0667	Aldo Keto reductase
ARUE_c39120	COG0656	L-ascorbic acid biosynthetic process
ARUE_c39260	COG2186	Transcriptional regulator
ARUE_c39280	COG1027	Aspartate ammonia-lyase
ARUE_c39330	COG3254	rhamnose metabolic process
ARUE_c39350	COG4948	Mandelate Racemase Muconate Lactonizing
ARUE_c39370	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c39390	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ARUE_c39420	COG4221	oxidoreductase activity
ARUE_c39450	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ARUE_c39480	COG1280	lysine exporter protein (LysE YggA)
ARUE_c39510	COG0640	Transcriptional regulator
ARUE_c39550	COG2197	response regulator
ARUE_c39570	COG1414	Transcriptional regulator
ARUE_c39590	COG0477	Major facilitator Superfamily
ARUE_c39610	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ARUE_c39660	COG1760	l-serine dehydratase
ARUE_c39700	COG0281	malic enzyme
ARUE_c39710	COG1309	transcriptional regulator
ARUE_c39770	COG0477	Major facilitator Superfamily
ARUE_c39780	COG2986	histidine ammonia-lyase
ARUE_c39790	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
ARUE_c39850	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ARUE_c39870	COG0477	Major facilitator Superfamily
ARUE_c39880	COG2814	Major facilitator Superfamily
ARUE_c39950	COG1113	amino acid transport
ARUE_c39970	COG4604	ABC transporter, ATP-binding protein
ARUE_c39980	COG4605	iron ion homeostasis
ARUE_c39990	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ARUE_c40010	COG0246	Mannitol dehydrogenase
ARUE_c40020	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ARUE_c40020	COG2213	PTS system mannitol-specific
ARUE_c40040	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ARUE_c40080	COG0596	Alpha beta hydrolase
ARUE_c40090	COG1793	dna ligase
ARUE_c40120	COG0686	Belongs to the AlaDH PNT family
ARUE_c40160	COG0673	inositol 2-dehydrogenase activity
ARUE_c40220	COG1309	transcriptional regulator
ARUE_c40280	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ARUE_c40310	COG0531	amino acid
ARUE_c40320	COG0402	S-adenosylhomocysteine deaminase activity
ARUE_c40340	COG0508	dehydrogenase complex catalyzes the overall conversion of
ARUE_c40350	COG0022	dehydrogenase e1 component
ARUE_c40380	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ARUE_c40390	COG1950	PFAM Membrane protein of
ARUE_c40410	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ARUE_c40440	COG1607	acyl-coa hydrolase
ARUE_c40460	COG4221	oxidoreductase activity
ARUE_c40470	COG0477	Major facilitator Superfamily
ARUE_c40480	COG1984	allophanate hydrolase subunit 2
ARUE_c40490	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
ARUE_c40500	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
ARUE_c40510	COG0583	DNA-binding transcription factor activity
ARUE_c40530	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ARUE_c40580	COG3971	2-oxopent-4-enoate hydratase activity
ARUE_c40610	COG1802	Transcriptional regulator
ARUE_c40620	COG0179	Fumarylacetoacetate (FAA) hydrolase
ARUE_c40680	COG2207	Transcriptional regulator
ARUE_c40680	COG3708	Transcriptional regulator
ARUE_c40700	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c40810	COG1609	Transcriptional regulator
ARUE_c40820	COG1653	transport
ARUE_c40840	COG0395	ABC-type sugar transport system, permease component
ARUE_c40890	COG0726	polysaccharide deacetylase
ARUE_c40900	COG0515	serine threonine protein kinase
ARUE_c40920	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ARUE_c40950	COG2267	carboxylic ester hydrolase activity
ARUE_c41000	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ARUE_c41030	COG1396	sequence-specific DNA binding
ARUE_c41050	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ARUE_c41080	COG3387	PFAM Glycoside hydrolase 15-related
ARUE_c41100	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
ARUE_c41120	COG0076	glutamate decarboxylase activity
ARUE_c41180	COG0789	Transcriptional regulator
ARUE_c41210	COG1414	Transcriptional regulator
ARUE_c41220	COG2814	Major facilitator Superfamily
ARUE_c41300	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ARUE_c41330	COG2815	serine threonine protein kinase
ARUE_c41330	COG0515	serine threonine protein kinase
ARUE_c41350	COG1846	Transcriptional regulator
ARUE_c41420	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ARUE_c41430	COG1760	l-serine dehydratase
ARUE_c41440	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ARUE_c41450	COG0509	glycine decarboxylation via glycine cleavage system
ARUE_c41460	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ARUE_c41470	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ARUE_c41470	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ARUE_c41480	COG3835	regulator
ARUE_c41500	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ARUE_c41530	COG1970	mechanosensitive ion channel activity
ARUE_c41580	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ARUE_c41590	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ARUE_c41600	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ARUE_c41630	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ARUE_c41710	COG2814	Major facilitator Superfamily
ARUE_c41760	COG0179	Fumarylacetoacetate (FAA) hydrolase
ARUE_c41770	COG0251	oxidation-reduction process
ARUE_c41790	COG1414	Transcriptional regulator
ARUE_c41800	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ARUE_c41820	COG0183	Belongs to the thiolase family
ARUE_c41830	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ARUE_c41870	COG3485	protocatechuate 3,4-dioxygenase
ARUE_c41890	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ARUE_c41900	COG1414	Transcriptional regulator
ARUE_c41910	COG0477	Major facilitator Superfamily
ARUE_c41960	COG3706	GGDEF domain
ARUE_c41980	COG0583	DNA-binding transcription factor activity
ARUE_c42020	COG2610	gluconate transmembrane transporter activity
ARUE_c42040	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
ARUE_c42070	COG1414	Transcriptional regulator
ARUE_c42130	COG3415	Transposase
ARUE_c42130	COG2801	Transposase and inactivated derivatives
ARUE_c42140	COG2326	polyphosphate kinase activity
ARUE_c42160	COG1737	Transcriptional regulator
ARUE_c42170	COG3876	Protein conserved in bacteria
ARUE_c42180	COG1472	Belongs to the glycosyl hydrolase 3 family
ARUE_c42230	COG1175	transmembrane transport
ARUE_c42240	COG1653	transport
ARUE_c42330	COG1414	Transcriptional regulator
ARUE_c42340	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ARUE_c42350	COG0395	ABC-type sugar transport system, permease component
ARUE_c42380	COG1937	Protein conserved in bacteria
ARUE_c42490	COG2259	Doxx family
ARUE_c42500	COG3848	Pyruvate phosphate dikinase
ARUE_c42500	COG0574	Belongs to the PEP-utilizing enzyme family
ARUE_c42520	COG1607	acyl-coa hydrolase
ARUE_c42580	COG3958	Transketolase
ARUE_c42590	COG3959	Transketolase, thiamine diphosphate binding domain
ARUE_c42610	COG1082	Xylose isomerase domain protein TIM barrel
ARUE_c42620	COG1028	Short-chain dehydrogenase reductase Sdr
ARUE_c42630	COG2376	Dihydroxyacetone kinase
ARUE_c42640	COG0698	ribose 5-phosphate isomerase
ARUE_c42680	COG0305	Participates in initiation and elongation during chromosome replication
ARUE_c42760	COG2610	gluconate transmembrane transporter activity
ARUE_c42770	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ARUE_c42780	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ARUE_c42800	COG1929	Belongs to the glycerate kinase type-1 family
ARUE_c42870	COG1414	Transcriptional regulator
ARUE_c42880	COG1131	(ABC) transporter
ARUE_c42920	COG0359	binds to the 23S rRNA
ARUE_c42930	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ARUE_c42950	COG0360	Binds together with S18 to 16S ribosomal RNA
ARUE_c42960	COG1742	UPF0060 membrane protein
ARUE_c42990	COG1113	amino acid transport
ARUE_c43000	COG1362	aminopeptidase activity
ARUE_c43020	COG2197	response regulator
ARUE_c43030	COG4585	Histidine kinase
ARUE_c43050	COG1131	(ABC) transporter
ARUE_c43070	COG0738	Major facilitator superfamily
ARUE_c43090	COG0488	(ABC) transporter
ARUE_c43100	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ARUE_c43110	COG0768	penicillin binding
ARUE_c43120	COG1501	Belongs to the glycosyl hydrolase 31 family
ARUE_c43130	COG2197	response regulator
ARUE_c43140	COG4585	Histidine kinase
ARUE_c43170	COG1733	regulation of RNA biosynthetic process
ARUE_c43180	COG2910	NAD(P)H-binding
ARUE_c43210	COG0406	alpha-ribazole phosphatase activity
ARUE_c43220	COG0617	tRNA 3'-terminal CCA addition
ARUE_c43260	COG0492	ferredoxin-NADP+ reductase activity
ARUE_c43270	COG3118	belongs to the thioredoxin family
ARUE_c43330	COG1192	Involved in chromosome partitioning
ARUE_c43340	COG0357	Ribosomal RNA small subunit methyltransferase G
ARUE_c43360	COG0706	membrane insertase activity
ARUE_c43370	COG0759	Could be involved in insertion of integral membrane proteins into the membrane