ARUE_113p00020 PF03992 Antibiotic biosynthesis monooxygenase ARUE_113p00030 PF02625 XdhC and CoxI family ARUE_113p00030 PF13478 XdhC Rossmann domain ARUE_113p00040 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_113p00040 PF01799 [2Fe-2S] binding domain ARUE_113p00050 PF00941 FAD binding domain in molybdopterin dehydrogenase ARUE_113p00050 PF03450 CO dehydrogenase flavoprotein C-terminal domain ARUE_113p00060 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ARUE_113p00060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ARUE_113p00070 PF01494 FAD binding domain ARUE_113p00080 PF00561 alpha/beta hydrolase fold ARUE_113p00090 PF07859 alpha/beta hydrolase fold ARUE_113p00100 PF07690 Major Facilitator Superfamily ARUE_113p00110 PF12804 MobA-like NTP transferase domain ARUE_113p00120 PF04055 Radical SAM superfamily ARUE_113p00120 PF06463 Molybdenum Cofactor Synthesis C ARUE_113p00120 PF13394 4Fe-4S single cluster domain ARUE_113p00130 PF02391 MoaE protein ARUE_113p00140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ARUE_113p00140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ARUE_113p00150 PF00406 Adenylate kinase ARUE_113p00160 PF07848 PaaX-like protein ARUE_113p00160 PF08223 PaaX-like protein C-terminal domain ARUE_113p00180 PF01042 Endoribonuclease L-PSP ARUE_113p00190 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_113p00200 PF07883 Cupin domain ARUE_113p00210 PF13622 Thioesterase-like superfamily ARUE_113p00220 PF00501 AMP-binding enzyme ARUE_113p00220 PF13193 AMP-binding enzyme C-terminal domain ARUE_113p00230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ARUE_113p00230 PF01494 FAD binding domain ARUE_113p00240 PF07848 PaaX-like protein ARUE_113p00240 PF08223 PaaX-like protein C-terminal domain ARUE_113p00250 PF03061 Thioesterase superfamily ARUE_113p00270 PF13676 TIR domain ARUE_113p00300 PF12083 ARUE_113p00300 ARUE_113p00380 PF00436 Single-strand binding protein family ARUE_113p00400 PF07510 ARUE_113p00400 ARUE_113p00480 PF00717 Peptidase S24-like ARUE_113p00490 PF00817 impB/mucB/samB family ARUE_113p00490 PF11799 impB/mucB/samB family C-terminal domain ARUE_113p00490 PF13438 ARUE_113p00490 ARUE_113p00560 PF00462 Glutaredoxin ARUE_113p00620 PF01580 FtsK/SpoIIIE family ARUE_113p00630 PF06414 Zeta toxin ARUE_113p00660 PF00877 NlpC/P60 family ARUE_113p00660 PF01551 Peptidase family M23 ARUE_113p00680 PF12846 AAA-like domain ARUE_113p00710 PF12642 Conjugative transposon protein TcpC ARUE_113p00730 PF13337 ARUE_113p00730 ARUE_113p00730 PF16565 ARUE_113p00730 ARUE_113p00740 PF08665 ARUE_113p00740 ARUE_113p00770 PF08747 Domain of unknown function (DUF1788) ARUE_113p00780 PF08849 Putative inner membrane protein (DUF1819) ARUE_113p00790 PF13614 AAA domain ARUE_113p00810 PF08666 SAF domain ARUE_113p00830 PF00437 Type II/IV secretion system protein ARUE_113p00840 PF00482 Type II secretion system (T2SS), protein F ARUE_113p00860 PF07811 ARUE_113p00860 ARUE_113p00870 PF07811 ARUE_113p00870 ARUE_113p00880 PF13400 ARUE_113p00880 ARUE_113p00920 PF01478 Type IV leader peptidase family ARUE_113p01010 PF01381 Helix-turn-helix ARUE_232p00010 PF13614 AAA domain ARUE_232p00080 PF00239 Resolvase, N terminal domain ARUE_232p00110 PF10604 Polyketide cyclase / dehydrase and lipid transport ARUE_232p00130 PF00440 Bacterial regulatory proteins, tetR family ARUE_232p00140 PF01526 ARUE_232p00140 ARUE_232p00140 PF13700 ARUE_232p00140 ARUE_232p00150 PF07929 Plasmid pRiA4b ORF-3-like protein ARUE_232p00170 PF03713 Domain of unknown function (DUF305) ARUE_232p00220 PF01790 ARUE_232p00220 ARUE_232p00230 PF07690 Major Facilitator Superfamily ARUE_232p00240 PF00581 Rhodanese-like domain ARUE_232p00240 PF00753 Metallo-beta-lactamase superfamily ARUE_232p00250 PF00085 Thioredoxin ARUE_232p00260 PF00581 Rhodanese-like domain ARUE_232p00270 PF00581 Rhodanese-like domain ARUE_232p00280 PF01925 ARUE_232p00280 ARUE_232p00300 PF02583 Metal-sensitive transcriptional repressor ARUE_232p00310 PF03625 Domain of unknown function DUF302 ARUE_232p00320 PF00394 Multicopper oxidase ARUE_232p00320 PF07731 Multicopper oxidase ARUE_232p00320 PF07732 Multicopper oxidase ARUE_232p00330 PF07690 Major Facilitator Superfamily ARUE_232p00340 PF01022 Bacterial regulatory protein, arsR family ARUE_232p00350 PF00239 Resolvase, N terminal domain ARUE_232p00360 PF13191 AAA ATPase domain ARUE_232p00380 PF13205 Bacterial Ig-like domain ARUE_232p00380 PF13313 ARUE_232p00380 ARUE_232p00400 PF04234 CopC domain ARUE_232p00420 PF13462 Thioredoxin ARUE_232p00430 PF01545 Cation efflux family ARUE_232p00440 PF01022 Bacterial regulatory protein, arsR family ARUE_232p00450 PF05425 ARUE_232p00450 ARUE_232p00450 PF09678 ARUE_232p00450 ARUE_232p00460 PF01022 Bacterial regulatory protein, arsR family ARUE_232p00470 PF09678 ARUE_232p00470 ARUE_232p00480 PF05140 ARUE_232p00480 ARUE_232p00490 PF02104 ARUE_232p00490 ARUE_232p00500 PF01551 Peptidase family M23 ARUE_232p00510 PF02386 Cation transport protein ARUE_232p00520 PF07884 Vitamin K epoxide reductase family ARUE_232p00530 PF00578 AhpC/TSA family ARUE_232p00540 PF02683 ARUE_232p00540 ARUE_232p00550 PF01252 ARUE_232p00550 ARUE_232p00560 PF00122 E1-E2 ATPase ARUE_232p00560 PF00702 haloacid dehalogenase-like hydrolase ARUE_232p00570 PF01022 Bacterial regulatory protein, arsR family ARUE_232p00590 PF07731 Multicopper oxidase ARUE_232p00590 PF07732 Multicopper oxidase ARUE_232p00600 PF01325 Iron dependent repressor, N-terminal DNA binding domain ARUE_232p00600 PF02742 Iron dependent repressor, metal binding and dimerisation domain ARUE_232p00600 PF04023 FeoA domain ARUE_232p00610 PF01758 Sodium Bile acid symporter family ARUE_232p00620 PF00571 CBS domain ARUE_232p00620 PF01595 ARUE_232p00620 ARUE_232p00630 PF00571 CBS domain ARUE_232p00630 PF01595 ARUE_232p00630 ARUE_232p00630 PF03471 Transporter associated domain ARUE_232p00640 PF00239 Resolvase, N terminal domain ARUE_232p00640 PF13384 Homeodomain-like domain ARUE_232p00680 PF00578 AhpC/TSA family ARUE_232p00690 PF02683 ARUE_232p00690 ARUE_232p00700 PF01022 Bacterial regulatory protein, arsR family ARUE_232p00710 PF00122 E1-E2 ATPase ARUE_232p00710 PF00702 haloacid dehalogenase-like hydrolase ARUE_232p00720 PF01252 ARUE_232p00720 ARUE_232p00730 PF03596 ARUE_232p00730 ARUE_232p00740 PF13462 Thioredoxin ARUE_232p00760 PF02012 BNR/Asp-box repeat ARUE_232p00770 PF03713 Domain of unknown function (DUF305) ARUE_232p00780 PF00122 E1-E2 ATPase ARUE_232p00780 PF00702 haloacid dehalogenase-like hydrolase ARUE_232p00790 PF00403 Heavy-metal-associated domain ARUE_232p00800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ARUE_232p00800 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_232p00810 PF00376 MerR family regulatory protein ARUE_232p00810 PF09278 MerR, DNA binding ARUE_232p00820 PF12867 DinB superfamily ARUE_232p00920 PF13830 ARUE_232p00920 ARUE_232p00940 PF02481 DNA recombination-mediator protein A ARUE_232p01000 PF02195 ParB-like nuclease domain ARUE_232p01020 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella ARUE_232p01030 PF01548 ARUE_232p01030 ARUE_232p01030 PF02371 ARUE_232p01030 ARUE_232p01040 PF00462 Glutaredoxin ARUE_232p01050 PF00436 Single-strand binding protein family ARUE_232p01080 PF00565 Staphylococcal nuclease homologue ARUE_232p01100 PF00665 Integrase core domain ARUE_232p01100 PF13276 ARUE_232p01100 ARUE_232p01130 PF08751 TrwC relaxase ARUE_232p01130 PF13604 AAA domain ARUE_232p01140 PF13834 ARUE_232p01140 ARUE_232p01150 PF13191 AAA ATPase domain ARUE_232p01170 PF00239 Resolvase, N terminal domain ARUE_232p01180 PF03781 Sulfatase-modifying factor enzyme 1 ARUE_232p01190 PF00480 ROK family ARUE_232p01190 PF13412 Winged helix-turn-helix DNA-binding ARUE_232p01200 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_232p01210 PF00005 ABC transporter ARUE_232p01220 PF09084 NMT1/THI5 like ARUE_232p01230 PF00884 Sulfatase ARUE_232p01230 PF16347 ARUE_232p01230 ARUE_232p01250 PF01380 SIS domain ARUE_232p01260 PF00480 ROK family ARUE_232p01270 PF00294 pfkB family carbohydrate kinase ARUE_232p01280 PF01116 Fructose-bisphosphate aldolase class-II ARUE_232p01300 PF13302 Acetyltransferase (GNAT) domain ARUE_232p01320 PF05544 Proline racemase ARUE_232p01330 PF01752 Collagenase ARUE_232p01330 PF04151 Bacterial pre-peptidase C-terminal domain ARUE_232p01330 PF08453 Peptidase family M9 N-terminal ARUE_232p01340 PF00196 Bacterial regulatory proteins, luxR family ARUE_232p01360 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain ARUE_232p01390 PF00665 Integrase core domain ARUE_232p01390 PF13011 ARUE_232p01390 ARUE_232p01410 PF04324 BFD-like [2Fe-2S] binding domain ARUE_232p01410 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_232p01420 PF01266 FAD dependent oxidoreductase ARUE_232p01430 PF05544 Proline racemase ARUE_232p01470 PF00392 Bacterial regulatory proteins, gntR family ARUE_232p01470 PF07729 FCD domain ARUE_232p01490 PF00005 ABC transporter ARUE_232p01500 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_232p01510 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_232p01520 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_232p01530 PF00701 Dihydrodipicolinate synthetase family ARUE_232p01540 PF02423 Ornithine cyclodeaminase/mu-crystallin family ARUE_232p01550 PF00083 Sugar (and other) transporter ARUE_232p01560 PF00171 Aldehyde dehydrogenase family ARUE_232p01570 PF00557 Metallopeptidase family M24 ARUE_232p01570 PF05195 Aminopeptidase P, N-terminal domain ARUE_232p01580 PF00561 alpha/beta hydrolase fold ARUE_232p01590 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_232p01600 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_232p01600 PF12911 ARUE_232p01600 ARUE_232p01610 PF00005 ABC transporter ARUE_232p01610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_232p01620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_232p01630 PF05378 ARUE_232p01630 ARUE_232p01640 PF06032 Protein of unknown function (DUF917) ARUE_232p01650 PF13556 PucR C-terminal helix-turn-helix domain ARUE_232p01670 PF00083 Sugar (and other) transporter ARUE_232p01680 PF01968 Hydantoinase/oxoprolinase ARUE_232p01680 PF05378 ARUE_232p01680 ARUE_232p01690 PF02538 ARUE_232p01690 ARUE_232p01710 PF01979 Amidohydrolase family ARUE_232p01720 PF03814 ARUE_232p01720 ARUE_232p01730 PF08453 Peptidase family M9 N-terminal ARUE_232p01740 PF12146 Putative lysophospholipase ARUE_232p01760 PF08877 MepB protein ARUE_232p01770 PF13191 AAA ATPase domain ARUE_232p01800 PF13443 Cro/C1-type HTH DNA-binding domain ARUE_232p01810 PF00589 Phage integrase family ARUE_232p01820 PF00589 Phage integrase family ARUE_232p01830 PF13443 Cro/C1-type HTH DNA-binding domain ARUE_232p01890 PF00176 SNF2 family N-terminal domain ARUE_232p01900 PF00176 SNF2 family N-terminal domain ARUE_232p01900 PF00271 Helicase conserved C-terminal domain ARUE_232p01900 PF13020 ARUE_232p01900 ARUE_232p01910 PF06634 ARUE_232p01910 ARUE_232p01920 PF04465 ARUE_232p01920 ARUE_232p01930 PF07751 ARUE_232p01930 ARUE_232p01940 PF13495 Phage integrase, N-terminal SAM-like domain ARUE_232p02010 PF07510 ARUE_232p02010 ARUE_232p02010 PF12587 ARUE_232p02010 ARUE_232p02020 PF00929 Exonuclease ARUE_232p02040 PF12696 TraM recognition site of TraD and TraG ARUE_232p02050 PF12846 AAA-like domain ARUE_232p02100 PF13614 AAA domain ARUE_232p02120 PF01551 Peptidase family M23 ARUE_c00010 PF00308 Bacterial dnaA protein ARUE_c00010 PF08299 Bacterial dnaA protein helix-turn-helix ARUE_c00020 PF00712 DNA polymerase III beta subunit, N-terminal domain ARUE_c00020 PF02767 DNA polymerase III beta subunit, central domain ARUE_c00020 PF02768 DNA polymerase III beta subunit, C-terminal domain ARUE_c00030 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ARUE_c00030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c00040 PF02463 RecF/RecN/SMC N terminal domain ARUE_c00050 PF00204 DNA gyrase B ARUE_c00050 PF00986 DNA gyrase B subunit, carboxyl terminus ARUE_c00050 PF01751 Toprim domain ARUE_c00050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c00060 PF00521 DNA gyrase/topoisomerase IV, subunit A ARUE_c00060 PF03989 DNA gyrase C-terminal domain, beta-propeller ARUE_c00070 PF12089 ARUE_c00070 ARUE_c00100 PF00892 EamA-like transporter family ARUE_c00110 PF00535 Glycosyl transferase family 2 ARUE_c00130 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ARUE_c00140 PF00643 B-box zinc finger ARUE_c00140 PF01694 Rhomboid family ARUE_c00150 PF06445 GyrI-like small molecule binding domain ARUE_c00170 PF03352 Methyladenine glycosylase ARUE_c00180 PF13532 2OG-Fe(II) oxygenase superfamily ARUE_c00190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ARUE_c00190 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ARUE_c00200 PF04542 Sigma-70 region 2 ARUE_c00200 PF08281 Sigma-70, region 4 ARUE_c00210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ARUE_c00210 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ARUE_c00220 PF06781 ARUE_c00220 ARUE_c00230 PF04203 Sortase family ARUE_c00240 PF00117 Glutamine amidotransferase class-I ARUE_c00250 PF00069 Protein kinase domain ARUE_c00250 PF03793 PASTA domain ARUE_c00260 PF00069 Protein kinase domain ARUE_c00260 PF03793 PASTA domain ARUE_c00270 PF00905 Penicillin binding protein transpeptidase domain ARUE_c00280 PF01098 ARUE_c00280 ARUE_c00290 PF13672 Protein phosphatase 2C ARUE_c00300 PF16697 ARUE_c00300 ARUE_c00310 PF12401 Protein of unknown function (DUF2662) ARUE_c00310 PF16697 ARUE_c00310 ARUE_c00330 PF00392 Bacterial regulatory proteins, gntR family ARUE_c00330 PF07729 FCD domain ARUE_c00340 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ARUE_c00340 PF13378 Enolase C-terminal domain-like ARUE_c00360 PF01453 D-mannose binding lectin ARUE_c00390 PF00440 Bacterial regulatory proteins, tetR family ARUE_c00390 PF02909 Tetracyclin repressor, C-terminal all-alpha domain ARUE_c00400 PF01593 Flavin containing amine oxidoreductase ARUE_c00410 PF00582 Universal stress protein family ARUE_c00420 PF13520 Amino acid permease ARUE_c00440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c00460 PF03466 LysR substrate binding domain ARUE_c00470 PF00392 Bacterial regulatory proteins, gntR family ARUE_c00470 PF07729 FCD domain ARUE_c00480 PF03746 LamB/YcsF family ARUE_c00490 PF00083 Sugar (and other) transporter ARUE_c00490 PF07690 Major Facilitator Superfamily ARUE_c00500 PF02626 Allophanate hydrolase subunit 2 ARUE_c00500 PF02682 Allophanate hydrolase subunit 1 ARUE_c00510 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ARUE_c00510 PF00364 Biotin-requiring enzyme ARUE_c00510 PF02785 Biotin carboxylase C-terminal domain ARUE_c00510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ARUE_c00520 PF01565 FAD binding domain ARUE_c00520 PF04030 D-arabinono-1,4-lactone oxidase ARUE_c00530 PF00356 Bacterial regulatory proteins, lacI family ARUE_c00530 PF13377 Periplasmic binding protein-like domain ARUE_c00540 PF01758 Sodium Bile acid symporter family ARUE_c00550 PF00916 ARUE_c00550 ARUE_c00550 PF01740 STAS domain ARUE_c00560 PF04607 Region found in RelA / SpoT proteins ARUE_c00570 PF07859 alpha/beta hydrolase fold ARUE_c00580 PF00294 pfkB family carbohydrate kinase ARUE_c00590 PF13409 Glutathione S-transferase, N-terminal domain ARUE_c00590 PF13410 Glutathione S-transferase, C-terminal domain ARUE_c00600 PF08282 haloacid dehalogenase-like hydrolase ARUE_c00610 PF04191 Phospholipid methyltransferase ARUE_c00620 PF01370 NAD dependent epimerase/dehydratase family ARUE_c00640 PF03009 Glycerophosphoryl diester phosphodiesterase family ARUE_c00650 PF00703 Glycosyl hydrolases family 2 ARUE_c00650 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ARUE_c00650 PF02837 Glycosyl hydrolases family 2, sugar binding domain ARUE_c00660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c00660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c00670 PF02595 Glycerate kinase family ARUE_c00680 PF10944 ARUE_c00680 ARUE_c00690 PF08922 Domain of unknown function (DUF1905) ARUE_c00690 PF13376 ARUE_c00690 ARUE_c00700 PF12697 Alpha/beta hydrolase family ARUE_c00740 PF07690 Major Facilitator Superfamily ARUE_c00750 PF12840 Helix-turn-helix domain ARUE_c00760 PF01872 RibD C-terminal domain ARUE_c00780 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella ARUE_c00790 PF01965 DJ-1/PfpI family ARUE_c00800 PF11188 ARUE_c00800 ARUE_c00810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c00820 PF00356 Bacterial regulatory proteins, lacI family ARUE_c00820 PF13377 Periplasmic binding protein-like domain ARUE_c00830 PF00232 Glycosyl hydrolase family 1 ARUE_c00840 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c00850 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c00860 PF13416 Bacterial extracellular solute-binding protein ARUE_c00870 PF00395 S-layer homology domain ARUE_c00870 PF01183 Glycosyl hydrolases family 25 ARUE_c00880 PF00860 Permease family ARUE_c00890 PF10129 ARUE_c00890 ARUE_c00900 PF00881 Nitroreductase family ARUE_c00920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ARUE_c00920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ARUE_c00920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ARUE_c00920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ARUE_c00930 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c00940 PF13828 ARUE_c00940 ARUE_c00950 PF00854 POT family ARUE_c00960 PF01425 Amidase ARUE_c00970 PF03575 Peptidase family S51 ARUE_c00980 PF00581 Rhodanese-like domain ARUE_c00990 PF00800 Prephenate dehydratase ARUE_c00990 PF01842 ACT domain ARUE_c01000 PF00781 Diacylglycerol kinase catalytic domain ARUE_c01010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ARUE_c01010 PF02403 Seryl-tRNA synthetase N-terminal domain ARUE_c01030 PF08282 haloacid dehalogenase-like hydrolase ARUE_c01040 PF12833 Helix-turn-helix domain ARUE_c01050 PF08570 ARUE_c01050 ARUE_c01060 PF03861 ANTAR domain ARUE_c01060 PF13185 GAF domain ARUE_c01070 PF04539 Sigma-70 region 3 ARUE_c01070 PF04542 Sigma-70 region 2 ARUE_c01070 PF04545 Sigma-70, region 4 ARUE_c01080 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ARUE_c01090 PF13242 HAD-hyrolase-like ARUE_c01100 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ARUE_c01110 PF13692 Glycosyl transferases group 1 ARUE_c01120 PF00534 Glycosyl transferases group 1 ARUE_c01120 PF13439 Glycosyltransferase Family 4 ARUE_c01130 PF13580 SIS domain ARUE_c01140 PF00294 pfkB family carbohydrate kinase ARUE_c01140 PF01467 Cytidylyltransferase ARUE_c01150 PF00106 short chain dehydrogenase ARUE_c01160 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ARUE_c01170 PF00294 pfkB family carbohydrate kinase ARUE_c01170 PF01467 Cytidylyltransferase ARUE_c01180 PF01370 NAD dependent epimerase/dehydratase family ARUE_c01190 PF06081 ARUE_c01190 ARUE_c01210 PF07332 ARUE_c01210 ARUE_c01220 PF12277 ARUE_c01220 ARUE_c01280 PF00719 Inorganic pyrophosphatase ARUE_c01290 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ARUE_c01300 PF10103 Uncharacterised conserved protein (DUF2342) ARUE_c01310 PF01171 PP-loop family ARUE_c01310 PF09179 TilS substrate binding domain ARUE_c01320 PF00156 Phosphoribosyl transferase domain ARUE_c01350 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c01350 PF01434 Peptidase family M41 ARUE_c01360 PF01227 GTP cyclohydrolase I ARUE_c01370 PF00809 Pterin binding enzyme ARUE_c01380 PF02152 Dihydroneopterin aldolase ARUE_c01390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ARUE_c01400 PF11377 ARUE_c01400 ARUE_c01410 PF03703 ARUE_c01410 ARUE_c01420 PF03703 ARUE_c01420 ARUE_c01430 PF10727 Rossmann-like domain ARUE_c01430 PF10728 Domain of unknown function (DUF2520) ARUE_c01440 PF02569 Pantoate-beta-alanine ligase ARUE_c01450 PF07690 Major Facilitator Superfamily ARUE_c01490 PF00730 HhH-GPD superfamily base excision DNA repair protein ARUE_c01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c01530 PF03466 LysR substrate binding domain ARUE_c01540 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase ARUE_c01550 PF00892 EamA-like transporter family ARUE_c01560 PF12697 Alpha/beta hydrolase family ARUE_c01570 PF12697 Alpha/beta hydrolase family ARUE_c01580 PF12697 Alpha/beta hydrolase family ARUE_c01590 PF00152 tRNA synthetases class II (D, K and N) ARUE_c01590 PF01336 OB-fold nucleic acid binding domain ARUE_c01600 PF11774 Lsr2 ARUE_c01620 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c01620 PF02151 UvrB/uvrC motif ARUE_c01620 PF02861 Clp amino terminal domain ARUE_c01620 PF07724 AAA domain (Cdc48 subfamily) ARUE_c01620 PF10431 C-terminal, D2-small domain, of ClpB protein ARUE_c01630 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ARUE_c01630 PF03033 Glycosyltransferase family 28 N-terminal domain ARUE_c01640 PF00326 Prolyl oligopeptidase family ARUE_c01650 PF00583 Acetyltransferase (GNAT) family ARUE_c01660 PF01565 FAD binding domain ARUE_c01680 PF02733 Dak1 domain ARUE_c01690 PF02734 DAK2 domain ARUE_c01700 PF00381 PTS HPr component phosphorylation site ARUE_c01700 PF03610 PTS system fructose IIA component ARUE_c01710 PF05532 CsbD-like ARUE_c01720 PF14019 ARUE_c01720 ARUE_c01740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c01750 PF12833 Helix-turn-helix domain ARUE_c01770 PF00633 Helix-hairpin-helix motif ARUE_c01770 PF00730 HhH-GPD superfamily base excision DNA repair protein ARUE_c01770 PF10576 Iron-sulfur binding domain of endonuclease III ARUE_c01790 PF02457 DisA bacterial checkpoint controller nucleotide-binding ARUE_c01790 PF10635 DisA bacterial checkpoint controller linker region ARUE_c01790 PF12826 Helix-hairpin-helix motif ARUE_c01800 PF01425 Amidase ARUE_c01810 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ARUE_c01810 PF00364 Biotin-requiring enzyme ARUE_c01810 PF02626 Allophanate hydrolase subunit 2 ARUE_c01810 PF02682 Allophanate hydrolase subunit 1 ARUE_c01810 PF02785 Biotin carboxylase C-terminal domain ARUE_c01810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ARUE_c01820 PF09347 Domain of unknown function (DUF1989) ARUE_c01830 PF09347 Domain of unknown function (DUF1989) ARUE_c01840 PF13520 Amino acid permease ARUE_c01850 PF00440 Bacterial regulatory proteins, tetR family ARUE_c01870 PF13481 AAA domain ARUE_c01870 PF13541 Subunit ChlI of Mg-chelatase ARUE_c01880 PF13515 ARUE_c01880 ARUE_c01890 PF12849 PBP superfamily domain ARUE_c01900 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c01910 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c01920 PF00005 ABC transporter ARUE_c01930 PF01384 ARUE_c01930 ARUE_c01980 PF06964 Alpha-L-arabinofuranosidase C-terminus ARUE_c02010 PF03861 ANTAR domain ARUE_c02010 PF13185 GAF domain ARUE_c02020 PF03861 ANTAR domain ARUE_c02020 PF13185 GAF domain ARUE_c02040 PF03861 ANTAR domain ARUE_c02040 PF13185 GAF domain ARUE_c02050 PF00356 Bacterial regulatory proteins, lacI family ARUE_c02050 PF13377 Periplasmic binding protein-like domain ARUE_c02060 PF01168 Alanine racemase, N-terminal domain ARUE_c02060 PF14031 Putative serine dehydratase domain ARUE_c02070 PF01613 Flavin reductase like domain ARUE_c02080 PF00547 Urease, gamma subunit ARUE_c02090 PF00699 Urease beta subunit ARUE_c02100 PF00449 Urease alpha-subunit, N-terminal domain ARUE_c02100 PF01979 Amidohydrolase family ARUE_c02110 PF02814 UreE urease accessory protein, N-terminal domain ARUE_c02110 PF05194 UreE urease accessory protein, C-terminal domain ARUE_c02120 PF01730 UreF ARUE_c02130 PF02492 CobW/HypB/UreG, nucleotide-binding domain ARUE_c02140 PF01774 UreD urease accessory protein ARUE_c02150 PF03824 ARUE_c02150 ARUE_c02160 PF00144 Beta-lactamase ARUE_c02190 PF04542 Sigma-70 region 2 ARUE_c02190 PF08281 Sigma-70, region 4 ARUE_c02210 PF00128 Alpha amylase, catalytic domain ARUE_c02240 PF10282 Lactonase, 7-bladed beta-propeller ARUE_c02250 PF00248 Aldo/keto reductase family ARUE_c02260 PF01370 NAD dependent epimerase/dehydratase family ARUE_c02270 PF00248 Aldo/keto reductase family ARUE_c02280 PF00248 Aldo/keto reductase family ARUE_c02290 PF13560 Helix-turn-helix domain ARUE_c02300 PF07311 Dodecin ARUE_c02310 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c02320 PF00582 Universal stress protein family ARUE_c02330 PF00544 Pectate lyase ARUE_c02330 PF01095 Pectinesterase ARUE_c02340 PF00544 Pectate lyase ARUE_c02340 PF01095 Pectinesterase ARUE_c02350 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c02360 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c02370 PF13416 Bacterial extracellular solute-binding protein ARUE_c02380 PF14100 ARUE_c02380 ARUE_c02390 PF04616 Glycosyl hydrolases family 43 ARUE_c02400 PF00356 Bacterial regulatory proteins, lacI family ARUE_c02400 PF13377 Periplasmic binding protein-like domain ARUE_c02410 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c02410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c02410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c02420 PF04199 Putative cyclase ARUE_c02430 PF13450 NAD(P)-binding Rossmann-like domain ARUE_c02440 PF01613 Flavin reductase like domain ARUE_c02460 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c02480 PF12833 Helix-turn-helix domain ARUE_c02480 PF14525 ARUE_c02480 ARUE_c02500 PF00392 Bacterial regulatory proteins, gntR family ARUE_c02500 PF07729 FCD domain ARUE_c02510 PF12697 Alpha/beta hydrolase family ARUE_c02520 PF07005 Protein of unknown function, DUF1537 ARUE_c02520 PF17042 ARUE_c02520 ARUE_c02530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c02530 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ARUE_c02540 PF02447 ARUE_c02540 ARUE_c02550 PF01116 Fructose-bisphosphate aldolase class-II ARUE_c02560 PF06993 ARUE_c02560 ARUE_c02570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c02580 PF01757 ARUE_c02580 ARUE_c02590 PF14542 GCN5-related N-acetyl-transferase ARUE_c02610 PF04542 Sigma-70 region 2 ARUE_c02620 PF01345 ARUE_c02620 ARUE_c02640 PF00282 Pyridoxal-dependent decarboxylase conserved domain ARUE_c02650 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ARUE_c02660 PF13523 Acetyltransferase (GNAT) domain ARUE_c02670 PF04183 IucA / IucC family ARUE_c02670 PF06276 Ferric iron reductase FhuF-like transporter ARUE_c02680 PF15892 ARUE_c02680 ARUE_c02690 PF00106 short chain dehydrogenase ARUE_c02710 PF13515 ARUE_c02710 ARUE_c02720 PF10604 Polyketide cyclase / dehydrase and lipid transport ARUE_c02730 PF00583 Acetyltransferase (GNAT) family ARUE_c02740 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c02750 PF04299 Putative FMN-binding domain ARUE_c02760 PF00892 EamA-like transporter family ARUE_c02770 PF00155 Aminotransferase class I and II ARUE_c02770 PF00392 Bacterial regulatory proteins, gntR family ARUE_c02780 PF00083 Sugar (and other) transporter ARUE_c02790 PF05175 Methyltransferase small domain ARUE_c02810 PF01068 ATP dependent DNA ligase domain ARUE_c02810 PF04679 ATP dependent DNA ligase C terminal region ARUE_c02810 PF13298 DNA polymerase Ligase (LigD) ARUE_c02820 PF02735 Ku70/Ku80 beta-barrel domain ARUE_c02830 PF07498 Rho termination factor, N-terminal domain ARUE_c02870 PF00210 Ferritin-like domain ARUE_c02880 PF01028 Eukaryotic DNA topoisomerase I, catalytic core ARUE_c02900 PF00440 Bacterial regulatory proteins, tetR family ARUE_c02900 PF13977 Bacterial transcriptional repressor ARUE_c02910 PF00381 PTS HPr component phosphorylation site ARUE_c02920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ARUE_c02920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ARUE_c02930 PF00294 pfkB family carbohydrate kinase ARUE_c02940 PF00455 ARUE_c02940 ARUE_c02940 PF08220 DeoR-like helix-turn-helix domain ARUE_c02960 PF03861 ANTAR domain ARUE_c02960 PF13185 GAF domain ARUE_c02980 PF04107 Glutamate-cysteine ligase family 2(GCS2) ARUE_c02990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c03000 PF12833 Helix-turn-helix domain ARUE_c03010 PF02230 Phospholipase/Carboxylesterase ARUE_c03020 PF00356 Bacterial regulatory proteins, lacI family ARUE_c03020 PF13377 Periplasmic binding protein-like domain ARUE_c03030 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c03040 PF03632 Glycosyl hydrolase family 65 central catalytic domain ARUE_c03040 PF03633 Glycosyl hydrolase family 65, C-terminal domain ARUE_c03040 PF03636 Glycosyl hydrolase family 65, N-terminal domain ARUE_c03060 PF07690 Major Facilitator Superfamily ARUE_c03070 PF12802 MarR family ARUE_c03080 PF13649 Methyltransferase domain ARUE_c03090 PF01409 tRNA synthetases class II core domain (F) ARUE_c03090 PF03147 Ferredoxin-fold anticodon binding domain ARUE_c03110 PF01844 HNH endonuclease ARUE_c03110 PF02720 ARUE_c03110 ARUE_c03130 PF01047 MarR family ARUE_c03140 PF01040 UbiA prenyltransferase family ARUE_c03160 PF01593 Flavin containing amine oxidoreductase ARUE_c03170 PF00494 Squalene/phytoene synthase ARUE_c03180 PF00348 Polyprenyl synthetase ARUE_c03190 PF00293 NUDIX domain ARUE_c03200 PF01047 MarR family ARUE_c03210 PF02517 CAAX protease self-immunity ARUE_c03220 PF00563 EAL domain ARUE_c03230 PF09594 ARUE_c03230 ARUE_c03240 PF09594 ARUE_c03240 ARUE_c03260 PF13472 GDSL-like Lipase/Acylhydrolase family ARUE_c03280 PF13560 Helix-turn-helix domain ARUE_c03290 PF00920 Dehydratase family ARUE_c03300 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c03300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c03300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c03310 PF03861 ANTAR domain ARUE_c03310 PF13185 GAF domain ARUE_c03320 PF03724 META domain ARUE_c03330 PF04960 Glutaminase ARUE_c03350 PF05977 Transmembrane secretion effector ARUE_c03370 PF03746 LamB/YcsF family ARUE_c03380 PF02626 Allophanate hydrolase subunit 2 ARUE_c03390 PF00753 Metallo-beta-lactamase superfamily ARUE_c03400 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c03410 PF04286 ARUE_c03410 ARUE_c03420 PF03009 Glycerophosphoryl diester phosphodiesterase family ARUE_c03440 PF03591 ARUE_c03440 ARUE_c03450 PF05437 ARUE_c03450 ARUE_c03460 PF00440 Bacterial regulatory proteins, tetR family ARUE_c03470 PF01910 Domain of unknown function DUF77 ARUE_c03480 PF01596 O-methyltransferase ARUE_c03490 PF13673 Acetyltransferase (GNAT) domain ARUE_c03510 PF08007 Cupin superfamily protein ARUE_c03520 PF06999 ARUE_c03520 ARUE_c03540 PF00005 ABC transporter ARUE_c03540 PF00664 ABC transporter transmembrane region ARUE_c03550 PF00005 ABC transporter ARUE_c03550 PF00664 ABC transporter transmembrane region ARUE_c03560 PF02311 AraC-like ligand binding domain ARUE_c03560 PF12833 Helix-turn-helix domain ARUE_c03570 PF01497 Periplasmic binding protein ARUE_c03580 PF04954 Siderophore-interacting protein ARUE_c03580 PF08021 Siderophore-interacting FAD-binding domain ARUE_c03590 PF01032 FecCD transport family ARUE_c03600 PF01032 FecCD transport family ARUE_c03610 PF00005 ABC transporter ARUE_c03620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c03620 PF03466 LysR substrate binding domain ARUE_c03630 PF00083 Sugar (and other) transporter ARUE_c03640 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c03650 PF01844 HNH endonuclease ARUE_c03650 PF02720 ARUE_c03650 ARUE_c03660 PF00324 Amino acid permease ARUE_c03680 PF03752 ARUE_c03680 ARUE_c03690 PF01614 Bacterial transcriptional regulator ARUE_c03690 PF09339 IclR helix-turn-helix domain ARUE_c03700 PF10604 Polyketide cyclase / dehydrase and lipid transport ARUE_c03710 PF01175 Urocanase ARUE_c03710 PF17391 ARUE_c03710 ARUE_c03710 PF17392 ARUE_c03710 ARUE_c03720 PF00221 Aromatic amino acid lyase ARUE_c03750 PF05088 ARUE_c03750 ARUE_c03790 PF00860 Permease family ARUE_c03800 PF04234 CopC domain ARUE_c03810 PF00877 NlpC/P60 family ARUE_c03830 PF00582 Universal stress protein family ARUE_c03840 PF00391 PEP-utilising enzyme, mobile domain ARUE_c03840 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ARUE_c03850 PF01545 Cation efflux family ARUE_c03860 PF06262 Possibl zinc metallo-peptidase ARUE_c03870 PF00294 pfkB family carbohydrate kinase ARUE_c03880 PF00892 EamA-like transporter family ARUE_c03960 PF02635 DsrE/DsrF-like family ARUE_c03970 PF03625 Domain of unknown function DUF302 ARUE_c03980 PF02583 Metal-sensitive transcriptional repressor ARUE_c03990 PF00581 Rhodanese-like domain ARUE_c03990 PF11127 Protein of unknown function (DUF2892) ARUE_c04000 PF01925 ARUE_c04000 ARUE_c04010 PF00581 Rhodanese-like domain ARUE_c04020 PF00581 Rhodanese-like domain ARUE_c04030 PF00085 Thioredoxin ARUE_c04040 PF00581 Rhodanese-like domain ARUE_c04050 PF00581 Rhodanese-like domain ARUE_c04050 PF00753 Metallo-beta-lactamase superfamily ARUE_c04060 PF07690 Major Facilitator Superfamily ARUE_c04080 PF02586 Uncharacterised ACR, COG2135 ARUE_c04090 PF01380 SIS domain ARUE_c04100 PF00294 pfkB family carbohydrate kinase ARUE_c04110 PF00356 Bacterial regulatory proteins, lacI family ARUE_c04110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ARUE_c04120 PF01547 Bacterial extracellular solute-binding protein ARUE_c04130 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c04140 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c04170 PF03780 ARUE_c04170 ARUE_c04220 PF14344 ARUE_c04220 ARUE_c04230 PF04203 Sortase family ARUE_c04240 PF04542 Sigma-70 region 2 ARUE_c04240 PF08281 Sigma-70, region 4 ARUE_c04250 PF10099 ARUE_c04250 ARUE_c04260 PF08713 DNA alkylation repair enzyme ARUE_c04270 PF01381 Helix-turn-helix ARUE_c04280 PF13416 Bacterial extracellular solute-binding protein ARUE_c04290 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c04300 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c04310 PF00356 Bacterial regulatory proteins, lacI family ARUE_c04310 PF13377 Periplasmic binding protein-like domain ARUE_c04330 PF03372 Endonuclease/Exonuclease/phosphatase family ARUE_c04340 PF03729 ARUE_c04340 ARUE_c04350 PF00072 Response regulator receiver domain ARUE_c04350 PF00196 Bacterial regulatory proteins, luxR family ARUE_c04360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c04360 PF07730 Histidine kinase ARUE_c04370 PF03928 Domain of unknown function (DUF336) ARUE_c04380 PF12796 Ankyrin repeats (3 copies) ARUE_c04390 PF00108 Thiolase, N-terminal domain ARUE_c04390 PF02803 Thiolase, C-terminal domain ARUE_c04400 PF01144 Coenzyme A transferase ARUE_c04410 PF01144 Coenzyme A transferase ARUE_c04420 PF01614 Bacterial transcriptional regulator ARUE_c04420 PF09339 IclR helix-turn-helix domain ARUE_c04430 PF00583 Acetyltransferase (GNAT) family ARUE_c04440 PF02469 Fasciclin domain ARUE_c04460 PF02028 BCCT family transporter ARUE_c04470 PF01614 Bacterial transcriptional regulator ARUE_c04470 PF09339 IclR helix-turn-helix domain ARUE_c04480 PF00994 Probable molybdopterin binding domain ARUE_c04480 PF03453 MoeA N-terminal region (domain I and II) ARUE_c04480 PF03454 MoeA C-terminal region (domain IV) ARUE_c04490 PF00107 Zinc-binding dehydrogenase ARUE_c04490 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c04500 PF00384 Molybdopterin oxidoreductase ARUE_c04500 PF01568 Molydopterin dinucleotide binding domain ARUE_c04510 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ARUE_c04510 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ARUE_c04520 PF04961 Formiminotransferase-cyclodeaminase ARUE_c04530 PF01266 FAD dependent oxidoreductase ARUE_c04530 PF01571 Aminomethyltransferase folate-binding domain ARUE_c04530 PF08669 Glycine cleavage T-protein C-terminal barrel domain ARUE_c04530 PF16350 ARUE_c04530 ARUE_c04540 PF00551 Formyl transferase ARUE_c04550 PF00392 Bacterial regulatory proteins, gntR family ARUE_c04550 PF07729 FCD domain ARUE_c04560 PF01680 SOR/SNZ family ARUE_c04580 PF00083 Sugar (and other) transporter ARUE_c04590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c04590 PF03466 LysR substrate binding domain ARUE_c04600 PF00355 Rieske [2Fe-2S] domain ARUE_c04600 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ARUE_c04610 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_c04610 PF00175 Oxidoreductase NAD-binding domain ARUE_c04610 PF00970 Oxidoreductase FAD-binding domain ARUE_c04620 PF00196 Bacterial regulatory proteins, luxR family ARUE_c04630 PF01380 SIS domain ARUE_c04640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ARUE_c04650 PF06202 Amylo-alpha-1,6-glucosidase ARUE_c04650 PF14742 ARUE_c04650 ARUE_c04670 PF00875 DNA photolyase ARUE_c04670 PF03441 FAD binding domain of DNA photolyase ARUE_c04690 PF00171 Aldehyde dehydrogenase family ARUE_c04700 PF16113 ARUE_c04700 ARUE_c04710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c04710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ARUE_c04720 PF00378 Enoyl-CoA hydratase/isomerase family ARUE_c04750 PF01872 RibD C-terminal domain ARUE_c04760 PF03070 TENA/THI-4/PQQC family ARUE_c04770 PF00582 Universal stress protein family ARUE_c04780 PF01844 HNH endonuclease ARUE_c04780 PF02720 ARUE_c04780 ARUE_c04790 PF12802 MarR family ARUE_c04800 PF00501 AMP-binding enzyme ARUE_c04800 PF13193 AMP-binding enzyme C-terminal domain ARUE_c04810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c04810 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c04810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c04820 PF13520 Amino acid permease ARUE_c04830 PF00732 GMC oxidoreductase ARUE_c04830 PF05199 GMC oxidoreductase ARUE_c04840 PF00171 Aldehyde dehydrogenase family ARUE_c04860 PF00174 Oxidoreductase molybdopterin binding domain ARUE_c04870 PF00440 Bacterial regulatory proteins, tetR family ARUE_c04870 PF13977 Bacterial transcriptional repressor ARUE_c04880 PF07739 TipAS antibiotic-recognition domain ARUE_c04880 PF13411 MerR HTH family regulatory protein ARUE_c04890 PF03551 Transcriptional regulator PadR-like family ARUE_c04900 PF02540 NAD synthase ARUE_c04910 PF00356 Bacterial regulatory proteins, lacI family ARUE_c04910 PF13377 Periplasmic binding protein-like domain ARUE_c04920 PF01547 Bacterial extracellular solute-binding protein ARUE_c04930 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c04940 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c04950 PF01261 Xylose isomerase-like TIM barrel ARUE_c04960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c04960 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c04970 PF01261 Xylose isomerase-like TIM barrel ARUE_c04980 PF02614 Glucuronate isomerase ARUE_c04990 PF01232 Mannitol dehydrogenase Rossmann domain ARUE_c04990 PF08125 Mannitol dehydrogenase C-terminal domain ARUE_c05000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ARUE_c05000 PF13378 Enolase C-terminal domain-like ARUE_c05010 PF01202 Shikimate kinase ARUE_c05020 PF13407 Periplasmic binding protein domain ARUE_c05030 PF00005 ABC transporter ARUE_c05040 PF02653 ARUE_c05040 ARUE_c05050 PF00356 Bacterial regulatory proteins, lacI family ARUE_c05050 PF13377 Periplasmic binding protein-like domain ARUE_c05060 PF00156 Phosphoribosyl transferase domain ARUE_c05070 PF00975 Thioesterase domain ARUE_c05080 PF00005 ABC transporter ARUE_c05090 PF12698 ABC-2 family transporter protein ARUE_c05100 PF01636 Phosphotransferase enzyme family ARUE_c05130 PF02441 Flavoprotein ARUE_c05150 PF00675 Insulinase (Peptidase family M16) ARUE_c05170 PF00072 Response regulator receiver domain ARUE_c05170 PF00196 Bacterial regulatory proteins, luxR family ARUE_c05180 PF07730 Histidine kinase ARUE_c05190 PF13350 Tyrosine phosphatase family ARUE_c05200 PF13242 HAD-hyrolase-like ARUE_c05200 PF13344 Haloacid dehalogenase-like hydrolase ARUE_c05220 PF00588 SpoU rRNA Methylase family ARUE_c05240 PF01116 Fructose-bisphosphate aldolase class-II ARUE_c05250 PF11349 ARUE_c05250 ARUE_c05260 PF00005 ABC transporter ARUE_c05270 PF01032 FecCD transport family ARUE_c05280 PF01032 FecCD transport family ARUE_c05290 PF01497 Periplasmic binding protein ARUE_c05310 PF00709 Adenylosuccinate synthetase ARUE_c05320 PF10067 ARUE_c05320 ARUE_c05330 PF00440 Bacterial regulatory proteins, tetR family ARUE_c05330 PF02909 Tetracyclin repressor, C-terminal all-alpha domain ARUE_c05340 PF07690 Major Facilitator Superfamily ARUE_c05350 PF08450 SMP-30/Gluconolaconase/LRE-like region ARUE_c05370 PF00890 FAD binding domain ARUE_c05370 PF02910 Fumarate reductase flavoprotein C-term ARUE_c05380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c05380 PF03466 LysR substrate binding domain ARUE_c05390 PF00056 lactate/malate dehydrogenase, NAD binding domain ARUE_c05390 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ARUE_c05400 PF13738 Pyridine nucleotide-disulphide oxidoreductase ARUE_c05410 PF00206 Lyase ARUE_c05410 PF10415 Fumarase C C-terminus ARUE_c05420 PF01546 Peptidase family M20/M25/M40 ARUE_c05420 PF07687 Peptidase dimerisation domain ARUE_c05430 PF06267 Family of unknown function (DUF1028) ARUE_c05440 PF01042 Endoribonuclease L-PSP ARUE_c05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c05450 PF03466 LysR substrate binding domain ARUE_c05460 PF00083 Sugar (and other) transporter ARUE_c05470 PF00440 Bacterial regulatory proteins, tetR family ARUE_c05470 PF13977 Bacterial transcriptional repressor ARUE_c05480 PF01179 Copper amine oxidase, enzyme domain ARUE_c05480 PF02728 Copper amine oxidase, N3 domain ARUE_c05500 PF00171 Aldehyde dehydrogenase family ARUE_c05510 PF13520 Amino acid permease ARUE_c05520 PF07690 Major Facilitator Superfamily ARUE_c05530 PF00561 alpha/beta hydrolase fold ARUE_c05540 PF00440 Bacterial regulatory proteins, tetR family ARUE_c05550 PF00999 Sodium/hydrogen exchanger family ARUE_c05560 PF11999 Protein of unknown function (DUF3494) ARUE_c05570 PF04203 Sortase family ARUE_c05580 PF09949 ARUE_c05580 ARUE_c05590 PF02517 CAAX protease self-immunity ARUE_c05600 PF02811 PHP domain ARUE_c05610 PF00356 Bacterial regulatory proteins, lacI family ARUE_c05610 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ARUE_c05620 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c05630 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c05640 PF00005 ABC transporter ARUE_c05650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c05650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c05660 PF01266 FAD dependent oxidoreductase ARUE_c05680 PF08818 Domain of unknown function (DU1801) ARUE_c05690 PF01594 ARUE_c05690 ARUE_c05710 PF00440 Bacterial regulatory proteins, tetR family ARUE_c05720 PF01120 Alpha-L-fucosidase ARUE_c05730 PF01844 HNH endonuclease ARUE_c05730 PF02720 ARUE_c05730 ARUE_c05740 PF04542 Sigma-70 region 2 ARUE_c05740 PF04545 Sigma-70, region 4 ARUE_c05760 PF13380 CoA binding domain ARUE_c05770 PF01522 Polysaccharide deacetylase ARUE_c05780 PF04237 YjbR ARUE_c05800 PF01547 Bacterial extracellular solute-binding protein ARUE_c05810 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c05820 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c05830 PF03992 Antibiotic biosynthesis monooxygenase ARUE_c05840 PF01613 Flavin reductase like domain ARUE_c05850 PF12973 ChrR Cupin-like domain ARUE_c05860 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ARUE_c05860 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ARUE_c05870 PF11010 ARUE_c05870 ARUE_c05880 PF00795 Carbon-nitrogen hydrolase ARUE_c05890 PF07690 Major Facilitator Superfamily ARUE_c05900 PF00392 Bacterial regulatory proteins, gntR family ARUE_c05900 PF07729 FCD domain ARUE_c05910 PF04456 Protein of unknown function (DUF503) ARUE_c05920 PF00155 Aminotransferase class I and II ARUE_c05930 PF00990 GGDEF domain ARUE_c05950 PF00563 EAL domain ARUE_c05950 PF00990 GGDEF domain ARUE_c05960 PF00586 AIR synthase related protein, N-terminal domain ARUE_c05960 PF02769 AIR synthase related protein, C-terminal domain ARUE_c05970 PF13507 CobB/CobQ-like glutamine amidotransferase domain ARUE_c05980 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ARUE_c06000 PF05067 Manganese containing catalase ARUE_c06010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c06020 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase ARUE_c06020 PF13088 BNR repeat-like domain ARUE_c06030 PF00082 Subtilase family ARUE_c06030 PF02225 PA domain ARUE_c06030 PF05922 Peptidase inhibitor I9 ARUE_c06060 PF01047 MarR family ARUE_c06080 PF01614 Bacterial transcriptional regulator ARUE_c06080 PF09339 IclR helix-turn-helix domain ARUE_c06090 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c06100 PF00005 ABC transporter ARUE_c06110 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c06120 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ARUE_c06130 PF08714 Formaldehyde-activating enzyme (Fae) ARUE_c06140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ARUE_c06140 PF13378 Enolase C-terminal domain-like ARUE_c06150 PF00171 Aldehyde dehydrogenase family ARUE_c06160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c06160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ARUE_c06170 PF00465 Iron-containing alcohol dehydrogenase ARUE_c06180 PF00171 Aldehyde dehydrogenase family ARUE_c06190 PF00106 short chain dehydrogenase ARUE_c06210 PF13834 ARUE_c06210 ARUE_c06220 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c06220 PF01915 Glycosyl hydrolase family 3 C-terminal domain ARUE_c06220 PF14310 Fibronectin type III-like domain ARUE_c06230 PF07690 Major Facilitator Superfamily ARUE_c06240 PF00440 Bacterial regulatory proteins, tetR family ARUE_c06250 PF00696 Amino acid kinase family ARUE_c06250 PF01842 ACT domain ARUE_c06250 PF13840 ACT domain ARUE_c06260 PF04248 Domain of unknown function (DUF427) ARUE_c06280 PF01872 RibD C-terminal domain ARUE_c06290 PF02132 RecR protein ARUE_c06290 PF13662 Toprim domain ARUE_c06300 PF12169 DNA polymerase III subunits gamma and tau domain III ARUE_c06300 PF13177 DNA polymerase III, delta subunit ARUE_c06330 PF01757 ARUE_c06330 ARUE_c06340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c06340 PF03466 LysR substrate binding domain ARUE_c06350 PF00171 Aldehyde dehydrogenase family ARUE_c06350 PF01619 Proline dehydrogenase ARUE_c06360 PF09995 ARUE_c06360 ARUE_c06370 PF07690 Major Facilitator Superfamily ARUE_c06380 PF01047 MarR family ARUE_c06390 PF01551 Peptidase family M23 ARUE_c06400 PF00255 Glutathione peroxidase ARUE_c06410 PF00149 Calcineurin-like phosphoesterase ARUE_c06420 PF11380 ARUE_c06420 ARUE_c06420 PF17101 ARUE_c06420 ARUE_c06420 PF17102 ARUE_c06420 ARUE_c06420 PF17103 ARUE_c06420 ARUE_c06460 PF13399 LytR cell envelope-related transcriptional attenuator ARUE_c06470 PF00440 Bacterial regulatory proteins, tetR family ARUE_c06480 PF13377 Periplasmic binding protein-like domain ARUE_c06490 PF13416 Bacterial extracellular solute-binding protein ARUE_c06500 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c06510 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c06520 PF06964 Alpha-L-arabinofuranosidase C-terminus ARUE_c06530 PF01323 DSBA-like thioredoxin domain ARUE_c06540 PF00534 Glycosyl transferases group 1 ARUE_c06540 PF13439 Glycosyltransferase Family 4 ARUE_c06550 PF06202 Amylo-alpha-1,6-glucosidase ARUE_c06550 PF14742 ARUE_c06550 ARUE_c06560 PF00583 Acetyltransferase (GNAT) family ARUE_c06570 PF00251 Glycosyl hydrolases family 32 N-terminal domain ARUE_c06570 PF08244 Glycosyl hydrolases family 32 C terminal ARUE_c06580 PF00294 pfkB family carbohydrate kinase ARUE_c06590 PF00356 Bacterial regulatory proteins, lacI family ARUE_c06590 PF13377 Periplasmic binding protein-like domain ARUE_c06600 PF05048 Periplasmic copper-binding protein (NosD) ARUE_c06610 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c06620 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c06630 PF01547 Bacterial extracellular solute-binding protein ARUE_c06640 PF05048 Periplasmic copper-binding protein (NosD) ARUE_c06650 PF00582 Universal stress protein family ARUE_c06660 PF01970 ARUE_c06660 ARUE_c06670 PF07331 ARUE_c06670 ARUE_c06680 PF03401 Tripartite tricarboxylate transporter family receptor ARUE_c06690 PF00989 PAS fold ARUE_c06690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c06690 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ARUE_c06690 PF17203 ARUE_c06690 ARUE_c06700 PF00072 Response regulator receiver domain ARUE_c06700 PF08279 HTH domain ARUE_c06710 PF05016 Plasmid stabilisation system protein ARUE_c06720 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ARUE_c06730 PF00296 Luciferase-like monooxygenase ARUE_c06740 PF03928 Domain of unknown function (DUF336) ARUE_c06750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c06750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c06760 PF07676 WD40-like Beta Propeller Repeat ARUE_c06770 PF01261 Xylose isomerase-like TIM barrel ARUE_c06770 PF07582 AP endonuclease family 2 C terminus ARUE_c06780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c06780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c06790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c06800 PF01261 Xylose isomerase-like TIM barrel ARUE_c06810 PF00480 ROK family ARUE_c06810 PF13412 Winged helix-turn-helix DNA-binding ARUE_c06820 PF07690 Major Facilitator Superfamily ARUE_c06830 PF01274 Malate synthase ARUE_c06840 PF00463 Isocitrate lyase family ARUE_c06850 PF01381 Helix-turn-helix ARUE_c06850 PF06114 Domain of unknown function (DUF955) ARUE_c06860 PF00079 Serpin (serine protease inhibitor) ARUE_c06870 PF00440 Bacterial regulatory proteins, tetR family ARUE_c06880 PF01292 Prokaryotic cytochrome b561 ARUE_c06890 PF08543 Phosphomethylpyrimidine kinase ARUE_c06900 PF16868 ARUE_c06900 ARUE_c06910 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c06910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c06920 PF00072 Response regulator receiver domain ARUE_c06920 PF00486 Transcriptional regulatory protein, C terminal ARUE_c06930 PF00083 Sugar (and other) transporter ARUE_c06950 PF01370 NAD dependent epimerase/dehydratase family ARUE_c06950 PF08338 Domain of unknown function (DUF1731) ARUE_c06960 PF00440 Bacterial regulatory proteins, tetR family ARUE_c06970 PF02592 ARUE_c06970 ARUE_c06980 PF01702 Queuine tRNA-ribosyltransferase ARUE_c07010 PF16262 ARUE_c07010 ARUE_c07030 PF13376 ARUE_c07030 ARUE_c07040 PF00005 ABC transporter ARUE_c07040 PF08402 TOBE domain ARUE_c07050 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c07060 PF13343 Bacterial extracellular solute-binding protein ARUE_c07070 PF03663 Glycosyl hydrolase family 76 ARUE_c07080 PF00106 short chain dehydrogenase ARUE_c07100 PF07920 Protein of unknown function (DUF1684) ARUE_c07120 PF04542 Sigma-70 region 2 ARUE_c07120 PF13490 Putative zinc-finger ARUE_c07130 PF02585 GlcNAc-PI de-N-acetylase ARUE_c07140 PF02655 ATP-grasp domain ARUE_c07150 PF13641 Glycosyltransferase like family 2 ARUE_c07170 PF00311 Phosphoenolpyruvate carboxylase ARUE_c07190 PF09335 ARUE_c07190 ARUE_c07200 PF01661 Macro domain ARUE_c07220 PF00849 RNA pseudouridylate synthase ARUE_c07230 PF12840 Helix-turn-helix domain ARUE_c07250 PF00440 Bacterial regulatory proteins, tetR family ARUE_c07250 PF13305 WHG domain ARUE_c07260 PF13826 ARUE_c07260 ARUE_c07270 PF00155 Aminotransferase class I and II ARUE_c07270 PF00392 Bacterial regulatory proteins, gntR family ARUE_c07290 PF02156 Glycosyl hydrolase family 26 ARUE_c07300 PF13466 STAS domain ARUE_c07310 PF00535 Glycosyl transferase family 2 ARUE_c07310 PF13632 Glycosyl transferase family group 2 ARUE_c07320 PF00652 Ricin-type beta-trefoil lectin domain ARUE_c07320 PF00722 Glycosyl hydrolases family 16 ARUE_c07330 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ARUE_c07330 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ARUE_c07340 PF00270 DEAD/DEAH box helicase ARUE_c07340 PF00271 Helicase conserved C-terminal domain ARUE_c07340 PF08494 ARUE_c07340 ARUE_c07350 PF14016 ARUE_c07350 ARUE_c07360 PF07987 Domain of unkown function (DUF1775) ARUE_c07410 PF01242 6-pyruvoyl tetrahydropterin synthase ARUE_c07420 PF00534 Glycosyl transferases group 1 ARUE_c07430 PF06224 ARUE_c07430 ARUE_c07450 PF14437 ARUE_c07450 ARUE_c07460 PF14681 Uracil phosphoribosyltransferase ARUE_c07480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c07490 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c07500 PF00282 Pyridoxal-dependent decarboxylase conserved domain ARUE_c07510 PF00535 Glycosyl transferase family 2 ARUE_c07530 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c07530 PF00672 HAMP domain ARUE_c07530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c07540 PF00072 Response regulator receiver domain ARUE_c07540 PF00486 Transcriptional regulatory protein, C terminal ARUE_c07550 PF00486 Transcriptional regulatory protein, C terminal ARUE_c07560 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c07580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c07580 PF03466 LysR substrate binding domain ARUE_c07590 PF00892 EamA-like transporter family ARUE_c07600 PF00171 Aldehyde dehydrogenase family ARUE_c07610 PF00440 Bacterial regulatory proteins, tetR family ARUE_c07610 PF02909 Tetracyclin repressor, C-terminal all-alpha domain ARUE_c07620 PF07969 Amidohydrolase family ARUE_c07630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c07640 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c07650 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c07650 PF12911 ARUE_c07650 ARUE_c07660 PF00005 ABC transporter ARUE_c07660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c07670 PF01266 FAD dependent oxidoreductase ARUE_c07690 PF00440 Bacterial regulatory proteins, tetR family ARUE_c07700 PF12698 ABC-2 family transporter protein ARUE_c07720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ARUE_c07720 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c07730 PF00581 Rhodanese-like domain ARUE_c07740 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ARUE_c07750 PF00480 ROK family ARUE_c07760 PF00701 Dihydrodipicolinate synthetase family ARUE_c07770 PF00005 ABC transporter ARUE_c07780 PF00005 ABC transporter ARUE_c07780 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c07780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c07780 PF12911 ARUE_c07780 ARUE_c07790 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c07800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c07800 PF10518 TAT (twin-arginine translocation) pathway signal sequence ARUE_c07810 PF00392 Bacterial regulatory proteins, gntR family ARUE_c07810 PF07729 FCD domain ARUE_c07830 PF00821 Phosphoenolpyruvate carboxykinase ARUE_c07830 PF17297 ARUE_c07830 ARUE_c07840 PF00042 Globin ARUE_c07840 PF00175 Oxidoreductase NAD-binding domain ARUE_c07840 PF00970 Oxidoreductase FAD-binding domain ARUE_c07850 PF02082 Transcriptional regulator ARUE_c07870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ARUE_c07870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ARUE_c07870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ARUE_c07870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ARUE_c07880 PF00270 DEAD/DEAH box helicase ARUE_c07880 PF00271 Helicase conserved C-terminal domain ARUE_c07890 PF07690 Major Facilitator Superfamily ARUE_c07910 PF00326 Prolyl oligopeptidase family ARUE_c07910 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ARUE_c07920 PF13454 FAD-NAD(P)-binding ARUE_c07930 PF00324 Amino acid permease ARUE_c07940 PF00149 Calcineurin-like phosphoesterase ARUE_c07940 PF00932 Lamin Tail Domain ARUE_c07940 PF02872 5'-nucleotidase, C-terminal domain ARUE_c07940 PF03372 Endonuclease/Exonuclease/phosphatase family ARUE_c07950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c07970 PF00107 Zinc-binding dehydrogenase ARUE_c07970 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c07980 PF03551 Transcriptional regulator PadR-like family ARUE_c07980 PF10400 Virulence activator alpha C-term ARUE_c07990 PF02554 ARUE_c07990 ARUE_c07990 PF13722 ARUE_c07990 ARUE_c08000 PF04328 ARUE_c08000 ARUE_c08010 PF10759 ARUE_c08010 ARUE_c08030 PF00248 Aldo/keto reductase family ARUE_c08040 PF01037 AsnC family ARUE_c08040 PF13404 AsnC-type helix-turn-helix domain ARUE_c08050 PF01425 Amidase ARUE_c08060 PF16481 ARUE_c08060 ARUE_c08080 PF01546 Peptidase family M20/M25/M40 ARUE_c08080 PF07687 Peptidase dimerisation domain ARUE_c08090 PF12158 ARUE_c08090 ARUE_c08110 PF00171 Aldehyde dehydrogenase family ARUE_c08130 PF00456 Transketolase, thiamine diphosphate binding domain ARUE_c08140 PF02779 Transketolase, pyrimidine binding domain ARUE_c08140 PF02780 Transketolase, C-terminal domain ARUE_c08150 PF00294 pfkB family carbohydrate kinase ARUE_c08160 PF13460 NADH(P)-binding ARUE_c08170 PF01370 NAD dependent epimerase/dehydratase family ARUE_c08180 PF07876 Stress responsive A/B Barrel Domain ARUE_c08200 PF00106 short chain dehydrogenase ARUE_c08210 PF01370 NAD dependent epimerase/dehydratase family ARUE_c08220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c08220 PF03466 LysR substrate binding domain ARUE_c08230 PF04909 Amidohydrolase ARUE_c08240 PF01106 NifU-like domain ARUE_c08250 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c08260 PF13407 Periplasmic binding protein domain ARUE_c08270 PF00005 ABC transporter ARUE_c08280 PF02653 ARUE_c08280 ARUE_c08290 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c08300 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c08310 PF00296 Luciferase-like monooxygenase ARUE_c08320 PF07690 Major Facilitator Superfamily ARUE_c08330 PF12802 MarR family ARUE_c08340 PF13185 GAF domain ARUE_c08340 PF13556 PucR C-terminal helix-turn-helix domain ARUE_c08350 PF01965 DJ-1/PfpI family ARUE_c08360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c08360 PF03466 LysR substrate binding domain ARUE_c08380 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c08390 PF00561 alpha/beta hydrolase fold ARUE_c08400 PF13177 DNA polymerase III, delta subunit ARUE_c08410 PF02223 Thymidylate kinase ARUE_c08420 PF01053 Cys/Met metabolism PLP-dependent enzyme ARUE_c08430 PF10724 ARUE_c08430 ARUE_c08450 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c08460 PF01895 PhoU domain ARUE_c08470 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c08470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c08480 PF00072 Response regulator receiver domain ARUE_c08480 PF00486 Transcriptional regulatory protein, C terminal ARUE_c08500 PF02559 CarD-like/TRCF domain ARUE_c08510 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ARUE_c08520 PF02542 YgbB family ARUE_c08540 PF01406 tRNA synthetases class I (C) catalytic domain ARUE_c08540 PF09190 DALR domain ARUE_c08550 PF00588 SpoU rRNA Methylase family ARUE_c08550 PF08032 RNA 2'-O ribose methyltransferase substrate binding ARUE_c08560 PF00795 Carbon-nitrogen hydrolase ARUE_c08570 PF00128 Alpha amylase, catalytic domain ARUE_c08580 PF00545 ribonuclease ARUE_c08590 PF01337 Barstar (barnase inhibitor) ARUE_c08600 PF00343 Carbohydrate phosphorylase ARUE_c08600 PF11897 ARUE_c08600 ARUE_c08610 PF00128 Alpha amylase, catalytic domain ARUE_c08610 PF11896 Domain of unknown function (DUF3416) ARUE_c08620 PF00128 Alpha amylase, catalytic domain ARUE_c08620 PF16657 ARUE_c08620 ARUE_c08630 PF00128 Alpha amylase, catalytic domain ARUE_c08630 PF02806 Alpha amylase, C-terminal all-beta domain ARUE_c08630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ARUE_c08670 PF08327 Activator of Hsp90 ATPase homolog 1-like protein ARUE_c08680 PF00583 Acetyltransferase (GNAT) family ARUE_c08700 PF00128 Alpha amylase, catalytic domain ARUE_c08710 PF13416 Bacterial extracellular solute-binding protein ARUE_c08720 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c08720 PF16296 ARUE_c08720 ARUE_c08730 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c08740 PF00128 Alpha amylase, catalytic domain ARUE_c08750 PF01565 FAD binding domain ARUE_c08750 PF02913 FAD linked oxidases, C-terminal domain ARUE_c08760 PF07690 Major Facilitator Superfamily ARUE_c08770 PF12900 Pyridoxamine 5'-phosphate oxidase ARUE_c08780 PF07969 Amidohydrolase family ARUE_c08790 PF00392 Bacterial regulatory proteins, gntR family ARUE_c08790 PF07729 FCD domain ARUE_c08800 PF13224 ARUE_c08800 ARUE_c08810 PF00728 Glycosyl hydrolase family 20, catalytic domain ARUE_c08810 PF02838 Glycosyl hydrolase family 20, domain 2 ARUE_c08820 PF00005 ABC transporter ARUE_c08820 PF03459 TOBE domain ARUE_c08830 PF02358 Trehalose-phosphatase ARUE_c08840 PF00982 Glycosyltransferase family 20 ARUE_c08850 PF13462 Thioredoxin ARUE_c08870 PF01022 Bacterial regulatory protein, arsR family ARUE_c08880 PF02558 Ketopantoate reductase PanE/ApbA ARUE_c08880 PF08546 Ketopantoate reductase PanE/ApbA C terminal ARUE_c08920 PF10067 ARUE_c08920 ARUE_c08930 PF09335 ARUE_c08930 ARUE_c08940 PF00356 Bacterial regulatory proteins, lacI family ARUE_c08940 PF13377 Periplasmic binding protein-like domain ARUE_c08950 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c08960 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c08970 PF01547 Bacterial extracellular solute-binding protein ARUE_c08980 PF00251 Glycosyl hydrolases family 32 N-terminal domain ARUE_c08980 PF08244 Glycosyl hydrolases family 32 C terminal ARUE_c08990 PF00251 Glycosyl hydrolases family 32 N-terminal domain ARUE_c08990 PF08244 Glycosyl hydrolases family 32 C terminal ARUE_c09000 PF01872 RibD C-terminal domain ARUE_c09010 PF00270 DEAD/DEAH box helicase ARUE_c09010 PF00271 Helicase conserved C-terminal domain ARUE_c09010 PF16124 ARUE_c09010 ARUE_c09020 PF01256 Carbohydrate kinase ARUE_c09030 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c09040 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c09050 PF11239 ARUE_c09050 ARUE_c09060 PF05853 Prokaryotic protein of unknown function (DUF849) ARUE_c09070 PF01904 Protein of unknown function DUF72 ARUE_c09120 PF01047 MarR family ARUE_c09130 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c09140 PF04909 Amidohydrolase ARUE_c09150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c09150 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c09150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c09160 PF01575 MaoC like domain ARUE_c09170 PF07690 Major Facilitator Superfamily ARUE_c09180 PF00501 AMP-binding enzyme ARUE_c09180 PF13193 AMP-binding enzyme C-terminal domain ARUE_c09190 PF05656 ARUE_c09190 ARUE_c09200 PF01266 FAD dependent oxidoreductase ARUE_c09210 PF02517 CAAX protease self-immunity ARUE_c09230 PF13834 ARUE_c09230 ARUE_c09250 PF13520 Amino acid permease ARUE_c09260 PF04371 Porphyromonas-type peptidyl-arginine deiminase ARUE_c09270 PF01844 HNH endonuclease ARUE_c09280 PF00557 Metallopeptidase family M24 ARUE_c09290 PF13560 Helix-turn-helix domain ARUE_c09300 PF01381 Helix-turn-helix ARUE_c09300 PF07883 Cupin domain ARUE_c09310 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c09330 PF01546 Peptidase family M20/M25/M40 ARUE_c09330 PF07687 Peptidase dimerisation domain ARUE_c09340 PF04961 Formiminotransferase-cyclodeaminase ARUE_c09360 PF07690 Major Facilitator Superfamily ARUE_c09370 PF00440 Bacterial regulatory proteins, tetR family ARUE_c09380 PF02347 Glycine cleavage system P-protein ARUE_c09390 PF01571 Aminomethyltransferase folate-binding domain ARUE_c09390 PF08669 Glycine cleavage T-protein C-terminal barrel domain ARUE_c09400 PF01597 Glycine cleavage H-protein ARUE_c09420 PF03313 ARUE_c09420 ARUE_c09420 PF03315 Serine dehydratase beta chain ARUE_c09430 PF01223 DNA/RNA non-specific endonuclease ARUE_c09440 PF02388 FemAB family ARUE_c09450 PF02388 FemAB family ARUE_c09460 PF06738 ARUE_c09460 ARUE_c09460 PF12821 ARUE_c09460 ARUE_c09470 PF04954 Siderophore-interacting protein ARUE_c09470 PF08021 Siderophore-interacting FAD-binding domain ARUE_c09480 PF03167 Uracil DNA glycosylase superfamily ARUE_c09490 PF11662 ARUE_c09490 ARUE_c09500 PF13399 LytR cell envelope-related transcriptional attenuator ARUE_c09510 PF00313 'Cold-shock' DNA-binding domain ARUE_c09520 PF00118 TCP-1/cpn60 chaperonin family ARUE_c09530 PF00075 RNase H ARUE_c09530 PF14534 Domain of unknown function (DUF4440) ARUE_c09540 PF06013 Proteins of 100 residues with WXG ARUE_c09550 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c09550 PF00672 HAMP domain ARUE_c09550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c09560 PF00072 Response regulator receiver domain ARUE_c09560 PF00486 Transcriptional regulatory protein, C terminal ARUE_c09570 PF01810 ARUE_c09570 ARUE_c09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c09580 PF03466 LysR substrate binding domain ARUE_c09600 PF07731 Multicopper oxidase ARUE_c09600 PF07732 Multicopper oxidase ARUE_c09620 PF04851 Type III restriction enzyme, res subunit ARUE_c09620 PF13625 ARUE_c09620 ARUE_c09620 PF16203 ARUE_c09620 ARUE_c09630 PF13625 ARUE_c09630 ARUE_c09660 PF11228 ARUE_c09660 ARUE_c09670 PF05977 Transmembrane secretion effector ARUE_c09680 PF00266 Aminotransferase class-V ARUE_c09700 PF01325 Iron dependent repressor, N-terminal DNA binding domain ARUE_c09700 PF02742 Iron dependent repressor, metal binding and dimerisation domain ARUE_c09700 PF04023 FeoA domain ARUE_c09710 PF01551 Peptidase family M23 ARUE_c09730 PF00877 NlpC/P60 family ARUE_c09740 PF01844 HNH endonuclease ARUE_c09750 PF12804 MobA-like NTP transferase domain ARUE_c09760 PF00994 Probable molybdopterin binding domain ARUE_c09760 PF03453 MoeA N-terminal region (domain I and II) ARUE_c09760 PF03454 MoeA C-terminal region (domain IV) ARUE_c09770 PF00384 Molybdopterin oxidoreductase ARUE_c09770 PF01568 Molydopterin dinucleotide binding domain ARUE_c09780 PF02634 FdhD/NarQ family ARUE_c09790 PF01074 Glycosyl hydrolases family 38 N-terminal domain ARUE_c09790 PF07748 Glycosyl hydrolases family 38 C-terminal domain ARUE_c09790 PF09261 Alpha mannosidase, middle domain ARUE_c09820 PF00005 ABC transporter ARUE_c09830 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c09840 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c09870 PF00005 ABC transporter ARUE_c09880 PF00005 ABC transporter ARUE_c09880 PF00664 ABC transporter transmembrane region ARUE_c09890 PF00293 NUDIX domain ARUE_c09920 PF06197 ARUE_c09920 ARUE_c09940 PF00459 Inositol monophosphatase family ARUE_c09950 PF00580 UvrD/REP helicase N-terminal domain ARUE_c09950 PF13361 UvrD-like helicase C-terminal domain ARUE_c09980 PF00549 CoA-ligase ARUE_c09980 PF08442 ATP-grasp domain ARUE_c09990 PF00549 CoA-ligase ARUE_c09990 PF02629 CoA binding domain ARUE_c10000 PF02585 GlcNAc-PI de-N-acetylase ARUE_c10000 PF13290 ARUE_c10000 ARUE_c10000 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella ARUE_c10010 PF07722 Peptidase C26 ARUE_c10020 PF03641 Possible lysine decarboxylase ARUE_c10030 PF00413 Matrixin ARUE_c10040 PF00413 Matrixin ARUE_c10050 PF01988 ARUE_c10050 ARUE_c10090 PF00474 Sodium:solute symporter family ARUE_c10100 PF07883 Cupin domain ARUE_c10100 PF13560 Helix-turn-helix domain ARUE_c10110 PF04480 Protein of unknown function (DUF559) ARUE_c10130 PF00491 Arginase family ARUE_c10140 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c10140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c10140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c10150 PF12802 MarR family ARUE_c10160 PF07690 Major Facilitator Superfamily ARUE_c10170 PF00005 ABC transporter ARUE_c10170 PF00664 ABC transporter transmembrane region ARUE_c10180 PF00005 ABC transporter ARUE_c10180 PF00664 ABC transporter transmembrane region ARUE_c10190 PF13279 Thioesterase-like superfamily ARUE_c10200 PF03932 CutC family ARUE_c10220 PF17128 ARUE_c10220 ARUE_c10230 PF07081 Protein of unknown function (DUF1349) ARUE_c10240 PF07728 AAA domain (dynein-related subfamily) ARUE_c10250 PF10117 ARUE_c10250 ARUE_c10260 PF13396 ARUE_c10260 ARUE_c10270 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c10280 PF00072 Response regulator receiver domain ARUE_c10280 PF00486 Transcriptional regulatory protein, C terminal ARUE_c10290 PF00037 4Fe-4S binding domain ARUE_c10300 PF00171 Aldehyde dehydrogenase family ARUE_c10310 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c10320 PF00701 Dihydrodipicolinate synthetase family ARUE_c10330 PF00378 Enoyl-CoA hydratase/isomerase family ARUE_c10340 PF02515 CoA-transferase family III ARUE_c10350 PF12831 FAD dependent oxidoreductase ARUE_c10360 PF07690 Major Facilitator Superfamily ARUE_c10370 PF01381 Helix-turn-helix ARUE_c10370 PF07883 Cupin domain ARUE_c10390 PF03852 DNA mismatch endonuclease Vsr ARUE_c10410 PF13500 AAA domain ARUE_c10420 PF00155 Aminotransferase class I and II ARUE_c10430 PF00202 Aminotransferase class-III ARUE_c10440 PF04055 Radical SAM superfamily ARUE_c10440 PF06968 Biotin and Thiamin Synthesis associated domain ARUE_c10460 PF05532 CsbD-like ARUE_c10470 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c10480 PF00107 Zinc-binding dehydrogenase ARUE_c10480 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c10480 PF13823 Alcohol dehydrogenase GroES-associated ARUE_c10510 PF13580 SIS domain ARUE_c10520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ARUE_c10530 PF00392 Bacterial regulatory proteins, gntR family ARUE_c10530 PF07729 FCD domain ARUE_c10540 PF01261 Xylose isomerase-like TIM barrel ARUE_c10550 PF02733 Dak1 domain ARUE_c10550 PF02734 DAK2 domain ARUE_c10560 PF02502 Ribose/Galactose Isomerase ARUE_c10570 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ARUE_c10570 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ARUE_c10580 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c10590 PF07690 Major Facilitator Superfamily ARUE_c10600 PF00121 Triosephosphate isomerase ARUE_c10610 PF13087 AAA domain ARUE_c10610 PF13482 RNase_H superfamily ARUE_c10610 PF13604 AAA domain ARUE_c10620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ARUE_c10630 PF00571 CBS domain ARUE_c10650 PF00575 S1 RNA binding domain ARUE_c10650 PF09371 Tex-like protein N-terminal domain ARUE_c10650 PF12836 Helix-hairpin-helix motif ARUE_c10650 PF16921 ARUE_c10650 ARUE_c10660 PF12146 Putative lysophospholipase ARUE_c10670 PF07784 ARUE_c10670 ARUE_c10690 PF00962 Adenosine/AMP deaminase ARUE_c10710 PF00708 Acylphosphatase ARUE_c10720 PF00440 Bacterial regulatory proteins, tetR family ARUE_c10730 PF07993 Male sterility protein ARUE_c10740 PF00294 pfkB family carbohydrate kinase ARUE_c10750 PF00392 Bacterial regulatory proteins, gntR family ARUE_c10750 PF07702 UTRA domain ARUE_c10760 PF07690 Major Facilitator Superfamily ARUE_c10770 PF01156 Inosine-uridine preferring nucleoside hydrolase ARUE_c10780 PF08327 Activator of Hsp90 ATPase homolog 1-like protein ARUE_c10780 PF12840 Helix-turn-helix domain ARUE_c10790 PF02449 Beta-galactosidase ARUE_c10790 PF08532 Beta-galactosidase trimerisation domain ARUE_c10790 PF08533 Beta-galactosidase C-terminal domain ARUE_c10800 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c10810 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c10820 PF13416 Bacterial extracellular solute-binding protein ARUE_c10830 PF04854 ARUE_c10830 ARUE_c10840 PF01979 Amidohydrolase family ARUE_c10850 PF02720 ARUE_c10850 ARUE_c10860 PF04978 Protein of unknown function (DUF664) ARUE_c10870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c10890 PF13302 Acetyltransferase (GNAT) domain ARUE_c10900 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c10900 PF01915 Glycosyl hydrolase family 3 C-terminal domain ARUE_c10900 PF14310 Fibronectin type III-like domain ARUE_c10910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c10910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c10920 PF14100 ARUE_c10920 ARUE_c10930 PF07883 Cupin domain ARUE_c10940 PF00356 Bacterial regulatory proteins, lacI family ARUE_c10940 PF13377 Periplasmic binding protein-like domain ARUE_c10960 PF03861 ANTAR domain ARUE_c10960 PF13185 GAF domain ARUE_c10970 PF07690 Major Facilitator Superfamily ARUE_c10980 PF12833 Helix-turn-helix domain ARUE_c10990 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c10990 PF13602 Zinc-binding dehydrogenase ARUE_c11000 PF00561 alpha/beta hydrolase fold ARUE_c11010 PF00440 Bacterial regulatory proteins, tetR family ARUE_c11020 PF03741 ARUE_c11020 ARUE_c11030 PF00271 Helicase conserved C-terminal domain ARUE_c11030 PF04851 Type III restriction enzyme, res subunit ARUE_c11030 PF11907 ARUE_c11030 ARUE_c11030 PF13091 PLD-like domain ARUE_c11050 PF00324 Amino acid permease ARUE_c11060 PF00106 short chain dehydrogenase ARUE_c11070 PF04993 TfoX N-terminal domain ARUE_c11080 PF13738 Pyridine nucleotide-disulphide oxidoreductase ARUE_c11090 PF00313 'Cold-shock' DNA-binding domain ARUE_c11130 PF00196 Bacterial regulatory proteins, luxR family ARUE_c11140 PF13520 Amino acid permease ARUE_c11150 PF07690 Major Facilitator Superfamily ARUE_c11160 PF06821 Serine hydrolase ARUE_c11170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ARUE_c11170 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ARUE_c11170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ARUE_c11180 PF00534 Glycosyl transferases group 1 ARUE_c11180 PF13439 Glycosyltransferase Family 4 ARUE_c11190 PF03793 PASTA domain ARUE_c11190 PF05901 ARUE_c11190 ARUE_c11210 PF13411 MerR HTH family regulatory protein ARUE_c11220 PF00011 Hsp20/alpha crystallin family ARUE_c11240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c11270 PF00551 Formyl transferase ARUE_c11280 PF00083 Sugar (and other) transporter ARUE_c11290 PF01380 SIS domain ARUE_c11300 PF01869 BadF/BadG/BcrA/BcrD ATPase family ARUE_c11320 PF01808 AICARFT/IMPCHase bienzyme ARUE_c11320 PF02142 MGS-like domain ARUE_c11350 PF00857 Isochorismatase family ARUE_c11360 PF01965 DJ-1/PfpI family ARUE_c11360 PF12833 Helix-turn-helix domain ARUE_c11370 PF03971 Monomeric isocitrate dehydrogenase ARUE_c11380 PF01266 FAD dependent oxidoreductase ARUE_c11390 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c11400 PF00005 ABC transporter ARUE_c11410 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein ARUE_c11420 PF01266 FAD dependent oxidoreductase ARUE_c11430 PF00392 Bacterial regulatory proteins, gntR family ARUE_c11430 PF07702 UTRA domain ARUE_c11440 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c11450 PF07681 ARUE_c11450 ARUE_c11460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c11470 PF00005 ABC transporter ARUE_c11480 PF02687 ARUE_c11480 ARUE_c11490 PF13407 Periplasmic binding protein domain ARUE_c11500 PF02653 ARUE_c11500 ARUE_c11510 PF00005 ABC transporter ARUE_c11520 PF00480 ROK family ARUE_c11520 PF12802 MarR family ARUE_c11530 PF00795 Carbon-nitrogen hydrolase ARUE_c11540 PF07905 ARUE_c11540 ARUE_c11540 PF13556 PucR C-terminal helix-turn-helix domain ARUE_c11550 PF00842 Alanine racemase, C-terminal domain ARUE_c11550 PF01168 Alanine racemase, N-terminal domain ARUE_c11560 PF13520 Amino acid permease ARUE_c11570 PF01593 Flavin containing amine oxidoreductase ARUE_c11590 PF03551 Transcriptional regulator PadR-like family ARUE_c11600 PF00132 Bacterial transferase hexapeptide (six repeats) ARUE_c11610 PF13649 Methyltransferase domain ARUE_c11620 PF00551 Formyl transferase ARUE_c11620 PF01842 ACT domain ARUE_c11630 PF00464 Serine hydroxymethyltransferase ARUE_c11640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ARUE_c11640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ARUE_c11650 PF00005 ABC transporter ARUE_c11660 PF01061 ARUE_c11660 ARUE_c11670 PF01061 ARUE_c11670 ARUE_c11680 PF07690 Major Facilitator Superfamily ARUE_c11690 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase ARUE_c11700 PF00356 Bacterial regulatory proteins, lacI family ARUE_c11700 PF13377 Periplasmic binding protein-like domain ARUE_c11720 PF03372 Endonuclease/Exonuclease/phosphatase family ARUE_c11730 PF00579 tRNA synthetases class I (W and Y) ARUE_c11740 PF13563 2'-5' RNA ligase superfamily ARUE_c11750 PF03631 ARUE_c11750 ARUE_c11770 PF04616 Glycosyl hydrolases family 43 ARUE_c11780 PF13416 Bacterial extracellular solute-binding protein ARUE_c11790 PF12146 Putative lysophospholipase ARUE_c11800 PF13085 2Fe-2S iron-sulfur cluster binding domain ARUE_c11800 PF13183 4Fe-4S dicluster domain ARUE_c11810 PF00890 FAD binding domain ARUE_c11810 PF02910 Fumarate reductase flavoprotein C-term ARUE_c11820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ARUE_c11830 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ARUE_c11840 PF00483 Nucleotidyl transferase ARUE_c11840 PF01050 Mannose-6-phosphate isomerase ARUE_c11850 PF01546 Peptidase family M20/M25/M40 ARUE_c11860 PF01047 MarR family ARUE_c11870 PF02566 OsmC-like protein ARUE_c11880 PF00107 Zinc-binding dehydrogenase ARUE_c11880 PF16884 ARUE_c11880 ARUE_c11890 PF02608 Basic membrane protein ARUE_c11900 PF00005 ABC transporter ARUE_c11910 PF02653 ARUE_c11910 ARUE_c11920 PF02653 ARUE_c11920 ARUE_c11930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ARUE_c11940 PF00591 Glycosyl transferase family, a/b domain ARUE_c11940 PF02885 Glycosyl transferase family, helical bundle domain ARUE_c11940 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ARUE_c11950 PF09335 ARUE_c11950 ARUE_c11960 PF09335 ARUE_c11960 ARUE_c11970 PF00962 Adenosine/AMP deaminase ARUE_c11980 PF03819 MazG nucleotide pyrophosphohydrolase domain ARUE_c11990 PF00113 Enolase, C-terminal TIM barrel domain ARUE_c11990 PF03952 Enolase, N-terminal domain ARUE_c12000 PF04977 Septum formation initiator ARUE_c12010 PF04417 ARUE_c12010 ARUE_c12020 PF02541 Ppx/GppA phosphatase family ARUE_c12030 PF00082 Subtilase family ARUE_c12040 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c12050 PF00583 Acetyltransferase (GNAT) family ARUE_c12050 PF10000 ACT domain ARUE_c12050 PF13840 ACT domain ARUE_c12070 PF13458 Periplasmic binding protein ARUE_c12080 PF00781 Diacylglycerol kinase catalytic domain ARUE_c12090 PF00005 ABC transporter ARUE_c12100 PF00005 ABC transporter ARUE_c12100 PF12399 Branched-chain amino acid ATP-binding cassette transporter ARUE_c12110 PF02653 ARUE_c12110 ARUE_c12120 PF02653 ARUE_c12120 ARUE_c12120 PF13620 Carboxypeptidase regulatory-like domain ARUE_c12130 PF12811 ARUE_c12130 ARUE_c12140 PF00108 Thiolase, N-terminal domain ARUE_c12140 PF02803 Thiolase, C-terminal domain ARUE_c12150 PF00288 GHMP kinases N terminal domain ARUE_c12150 PF08544 GHMP kinases C terminal ARUE_c12150 PF10509 Galactokinase galactose-binding signature ARUE_c12160 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ARUE_c12160 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ARUE_c12170 PF01263 Aldose 1-epimerase ARUE_c12180 PF01594 ARUE_c12180 ARUE_c12190 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c12190 PF01842 ACT domain ARUE_c12200 PF01694 Rhomboid family ARUE_c12210 PF01272 Transcription elongation factor, GreA/GreB, C-term ARUE_c12210 PF03449 Transcription elongation factor, N-terminal ARUE_c12220 PF14155 ARUE_c12220 ARUE_c12230 PF02585 GlcNAc-PI de-N-acetylase ARUE_c12250 PF03190 Protein of unknown function, DUF255 ARUE_c12260 PF03006 ARUE_c12260 ARUE_c12270 PF01255 Putative undecaprenyl diphosphate synthase ARUE_c12280 PF02562 PhoH-like protein ARUE_c12280 PF13638 PIN domain ARUE_c12290 PF13302 Acetyltransferase (GNAT) domain ARUE_c12310 PF01478 Type IV leader peptidase family ARUE_c12320 PF03724 META domain ARUE_c12330 PF00293 NUDIX domain ARUE_c12340 PF07690 Major Facilitator Superfamily ARUE_c12350 PF00440 Bacterial regulatory proteins, tetR family ARUE_c12360 PF00206 Lyase ARUE_c12360 PF10415 Fumarase C C-terminus ARUE_c12370 PF00484 Carbonic anhydrase ARUE_c12380 PF14030 ARUE_c12380 ARUE_c12390 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ARUE_c12400 PF13480 Acetyltransferase (GNAT) domain ARUE_c12410 PF01238 Phosphomannose isomerase type I ARUE_c12420 PF03816 Cell envelope-related transcriptional attenuator domain ARUE_c12430 PF00731 AIR carboxylase ARUE_c12440 PF02222 ATP-grasp domain ARUE_c12450 PF04138 ARUE_c12450 ARUE_c12470 PF02467 ARUE_c12470 ARUE_c12480 PF13641 Glycosyltransferase like family 2 ARUE_c12500 PF06262 Possibl zinc metallo-peptidase ARUE_c12510 PF12005 ARUE_c12510 ARUE_c12530 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ARUE_c12530 PF05221 S-adenosyl-L-homocysteine hydrolase ARUE_c12540 PF03734 L,D-transpeptidase catalytic domain ARUE_c12540 PF13205 Bacterial Ig-like domain ARUE_c12560 PF00805 Pentapeptide repeats (8 copies) ARUE_c12570 PF06271 ARUE_c12570 ARUE_c12580 PF01944 ARUE_c12580 ARUE_c12600 PF07314 ARUE_c12600 ARUE_c12610 PF05090 ARUE_c12610 ARUE_c12620 PF17418 ARUE_c12620 ARUE_c12650 PF00501 AMP-binding enzyme ARUE_c12660 PF02366 ARUE_c12660 ARUE_c12660 PF16192 ARUE_c12660 ARUE_c12670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ARUE_c12680 PF00171 Aldehyde dehydrogenase family ARUE_c12690 PF01841 Transglutaminase-like superfamily ARUE_c12690 PF13559 ARUE_c12690 ARUE_c12700 PF01882 ARUE_c12700 ARUE_c12710 PF07726 ATPase family associated with various cellular activities (AAA) ARUE_c12720 PF01026 TatD related DNase ARUE_c12730 PF03990 ARUE_c12730 ARUE_c12730 PF06737 Transglycosylase-like domain ARUE_c12730 PF07501 G5 domain ARUE_c12740 PF00398 Ribosomal RNA adenine dimethylase ARUE_c12750 PF00288 GHMP kinases N terminal domain ARUE_c12750 PF08544 GHMP kinases C terminal ARUE_c12760 PF00005 ABC transporter ARUE_c12780 PF00440 Bacterial regulatory proteins, tetR family ARUE_c12800 PF00132 Bacterial transferase hexapeptide (six repeats) ARUE_c12800 PF12804 MobA-like NTP transferase domain ARUE_c12810 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ARUE_c12810 PF14572 Phosphoribosyl synthetase-associated domain ARUE_c12830 PF01386 Ribosomal L25p family ARUE_c12830 PF14693 Ribosomal protein TL5, C-terminal domain ARUE_c12840 PF01195 Peptidyl-tRNA hydrolase ARUE_c12850 PF00196 Bacterial regulatory proteins, luxR family ARUE_c12860 PF00196 Bacterial regulatory proteins, luxR family ARUE_c12860 PF13191 AAA ATPase domain ARUE_c12880 PF00266 Aminotransferase class-V ARUE_c12890 PF01592 NifU-like N terminal domain ARUE_c12900 PF06965 Na+/H+ antiporter 1 ARUE_c12920 PF10698 ARUE_c12920 ARUE_c12930 PF11066 ARUE_c12930 ARUE_c12930 PF13460 NADH(P)-binding ARUE_c12940 PF00270 DEAD/DEAH box helicase ARUE_c12940 PF00271 Helicase conserved C-terminal domain ARUE_c12940 PF02559 CarD-like/TRCF domain ARUE_c12940 PF03461 TRCF domain ARUE_c12950 PF04307 ARUE_c12950 ARUE_c12970 PF01791 DeoC/LacD family aldolase ARUE_c12980 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c13000 PF01872 RibD C-terminal domain ARUE_c13010 PF01545 Cation efflux family ARUE_c13020 PF13462 Thioredoxin ARUE_c13030 PF00717 Peptidase S24-like ARUE_c13040 PF00356 Bacterial regulatory proteins, lacI family ARUE_c13040 PF13377 Periplasmic binding protein-like domain ARUE_c13060 PF00083 Sugar (and other) transporter ARUE_c13100 PF00817 impB/mucB/samB family ARUE_c13100 PF11799 impB/mucB/samB family C-terminal domain ARUE_c13100 PF13438 ARUE_c13100 ARUE_c13110 PF00486 Transcriptional regulatory protein, C terminal ARUE_c13110 PF02602 Uroporphyrinogen-III synthase HemD ARUE_c13120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ARUE_c13130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ARUE_c13130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ARUE_c13130 PF04324 BFD-like [2Fe-2S] binding domain ARUE_c13130 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c13140 PF13806 Rieske-like [2Fe-2S] domain ARUE_c13150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ARUE_c13150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ARUE_c13150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ARUE_c13150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ARUE_c13160 PF00251 Glycosyl hydrolases family 32 N-terminal domain ARUE_c13160 PF08244 Glycosyl hydrolases family 32 C terminal ARUE_c13170 PF02435 Levansucrase/Invertase ARUE_c13180 PF01048 Phosphorylase superfamily ARUE_c13200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ARUE_c13200 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c13210 PF00753 Metallo-beta-lactamase superfamily ARUE_c13220 PF04324 BFD-like [2Fe-2S] binding domain ARUE_c13220 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c13230 PF00384 Molybdopterin oxidoreductase ARUE_c13230 PF01568 Molydopterin dinucleotide binding domain ARUE_c13230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ARUE_c13240 PF07690 Major Facilitator Superfamily ARUE_c13250 PF00083 Sugar (and other) transporter ARUE_c13260 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ARUE_c13260 PF00364 Biotin-requiring enzyme ARUE_c13260 PF02785 Biotin carboxylase C-terminal domain ARUE_c13260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ARUE_c13270 PF02545 Maf-like protein ARUE_c13280 PF03176 MMPL family ARUE_c13290 PF00440 Bacterial regulatory proteins, tetR family ARUE_c13300 PF01906 Putative heavy-metal-binding ARUE_c13310 PF00375 Sodium:dicarboxylate symporter family ARUE_c13320 PF05960 Bacterial protein of unknown function (DUF885) ARUE_c13330 PF13822 ARUE_c13330 ARUE_c13340 PF01039 Carboxyl transferase domain ARUE_c13350 PF00106 short chain dehydrogenase ARUE_c13360 PF03099 Biotin/lipoate A/B protein ligase family ARUE_c13370 PF03703 ARUE_c13370 ARUE_c13380 PF00211 Adenylate and Guanylate cyclase catalytic domain ARUE_c13390 PF00041 Fibronectin type III domain ARUE_c13400 PF07726 ATPase family associated with various cellular activities (AAA) ARUE_c13410 PF01882 ARUE_c13410 ARUE_c13420 PF01841 Transglutaminase-like superfamily ARUE_c13430 PF00498 FHA domain ARUE_c13430 PF06271 ARUE_c13430 ARUE_c13440 PF13672 Protein phosphatase 2C ARUE_c13450 PF00498 FHA domain ARUE_c13460 PF00069 Protein kinase domain ARUE_c13480 PF01580 FtsK/SpoIIIE family ARUE_c13480 PF16697 ARUE_c13480 ARUE_c13490 PF00533 BRCA1 C Terminus (BRCT) domain ARUE_c13490 PF01653 NAD-dependent DNA ligase adenylation domain ARUE_c13490 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ARUE_c13490 PF03120 NAD-dependent DNA ligase OB-fold domain ARUE_c13490 PF12826 Helix-hairpin-helix motif ARUE_c13500 PF00459 Inositol monophosphatase family ARUE_c13510 PF13304 AAA domain ARUE_c13520 PF00248 Aldo/keto reductase family ARUE_c13530 PF00296 Luciferase-like monooxygenase ARUE_c13540 PF00005 ABC transporter ARUE_c13550 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c13560 PF09084 NMT1/THI5 like ARUE_c13570 PF00583 Acetyltransferase (GNAT) family ARUE_c13580 PF01042 Endoribonuclease L-PSP ARUE_c13590 PF00072 Response regulator receiver domain ARUE_c13590 PF01978 Sugar-specific transcriptional regulator TrmB ARUE_c13600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c13600 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ARUE_c13600 PF17203 ARUE_c13600 ARUE_c13610 PF03600 Citrate transporter ARUE_c13650 PF02686 Glu-tRNAGln amidotransferase C subunit ARUE_c13660 PF01425 Amidase ARUE_c13670 PF02637 GatB domain ARUE_c13670 PF02934 GatB/GatE catalytic domain ARUE_c13690 PF03781 Sulfatase-modifying factor enzyme 1 ARUE_c13700 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c13710 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c13730 PF00356 Bacterial regulatory proteins, lacI family ARUE_c13730 PF13377 Periplasmic binding protein-like domain ARUE_c13740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c13740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c13750 PF03466 LysR substrate binding domain ARUE_c13760 PF00107 Zinc-binding dehydrogenase ARUE_c13760 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c13770 PF00155 Aminotransferase class I and II ARUE_c13780 PF01266 FAD dependent oxidoreductase ARUE_c13790 PF01979 Amidohydrolase family ARUE_c13800 PF08305 NPCBM/NEW2 domain ARUE_c13800 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase ARUE_c13800 PF12905 Endo-alpha-N-acetylgalactosaminidase ARUE_c13800 PF17451 ARUE_c13800 ARUE_c13810 PF01380 SIS domain ARUE_c13820 PF00480 ROK family ARUE_c13830 PF00294 pfkB family carbohydrate kinase ARUE_c13840 PF01116 Fructose-bisphosphate aldolase class-II ARUE_c13850 PF00455 ARUE_c13850 ARUE_c13850 PF08220 DeoR-like helix-turn-helix domain ARUE_c13860 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c13870 PF02517 CAAX protease self-immunity ARUE_c13880 PF13468 Glyoxalase-like domain ARUE_c13890 PF01053 Cys/Met metabolism PLP-dependent enzyme ARUE_c13900 PF00561 alpha/beta hydrolase fold ARUE_c13920 PF06224 ARUE_c13920 ARUE_c13930 PF13472 GDSL-like Lipase/Acylhydrolase family ARUE_c13940 PF02230 Phospholipase/Carboxylesterase ARUE_c13950 PF13275 S4 domain ARUE_c13960 PF04657 ARUE_c13960 ARUE_c13970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ARUE_c13970 PF03129 Anticodon binding domain ARUE_c13990 PF01565 FAD binding domain ARUE_c13990 PF08031 Berberine and berberine like ARUE_c14000 PF07907 ARUE_c14000 ARUE_c14010 PF01207 Dihydrouridine synthase (Dus) ARUE_c14020 PF01966 HD domain ARUE_c14020 PF13286 Phosphohydrolase-associated domain ARUE_c14030 PF01807 CHC2 zinc finger ARUE_c14030 PF08275 DNA primase catalytic core, N-terminal domain ARUE_c14030 PF08278 DNA primase DnaG DnaB-binding ARUE_c14030 PF10410 DnaB-helicase binding domain of primase ARUE_c14030 PF13662 Toprim domain ARUE_c14070 PF00756 Putative esterase ARUE_c14080 PF09924 Uncharacterized conserved protein (DUF2156) ARUE_c14090 PF07690 Major Facilitator Superfamily ARUE_c14100 PF07332 ARUE_c14100 ARUE_c14110 PF01066 CDP-alcohol phosphatidyltransferase ARUE_c14120 PF05653 ARUE_c14120 ARUE_c14130 PF00534 Glycosyl transferases group 1 ARUE_c14130 PF13439 Glycosyltransferase Family 4 ARUE_c14150 PF10881 ARUE_c14150 ARUE_c14150 PF13086 AAA domain ARUE_c14150 PF13087 AAA domain ARUE_c14160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c14160 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c14160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c14170 PF00318 Ribosomal protein S2 ARUE_c14180 PF00889 Elongation factor TS ARUE_c14190 PF00696 Amino acid kinase family ARUE_c14200 PF01765 Ribosome recycling factor ARUE_c14210 PF01148 Cytidylyltransferase family ARUE_c14240 PF00474 Sodium:solute symporter family ARUE_c14260 PF00072 Response regulator receiver domain ARUE_c14260 PF04397 LytTr DNA-binding domain ARUE_c14270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c14270 PF06580 ARUE_c14270 ARUE_c14280 PF04341 ARUE_c14280 ARUE_c14290 PF00474 Sodium:solute symporter family ARUE_c14300 PF02811 PHP domain ARUE_c14300 PF14716 Helix-hairpin-helix domain ARUE_c14320 PF14325 ARUE_c14320 ARUE_c14340 PF01037 AsnC family ARUE_c14340 PF13404 AsnC-type helix-turn-helix domain ARUE_c14350 PF00676 Dehydrogenase E1 component ARUE_c14360 PF02779 Transketolase, pyrimidine binding domain ARUE_c14360 PF02780 Transketolase, C-terminal domain ARUE_c14370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ARUE_c14370 PF00364 Biotin-requiring enzyme ARUE_c14370 PF02817 e3 binding domain ARUE_c14380 PF01370 NAD dependent epimerase/dehydratase family ARUE_c14390 PF02720 ARUE_c14390 ARUE_c14400 PF00440 Bacterial regulatory proteins, tetR family ARUE_c14410 PF01039 Carboxyl transferase domain ARUE_c14420 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ARUE_c14420 PF00364 Biotin-requiring enzyme ARUE_c14420 PF02785 Biotin carboxylase C-terminal domain ARUE_c14420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ARUE_c14430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c14430 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c14430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c14440 PF01144 Coenzyme A transferase ARUE_c14450 PF01144 Coenzyme A transferase ARUE_c14460 PF01575 MaoC like domain ARUE_c14470 PF03328 HpcH/HpaI aldolase/citrate lyase family ARUE_c14480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c14490 PF06283 Trehalose utilisation ARUE_c14500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c14500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c14510 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c14520 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c14530 PF13416 Bacterial extracellular solute-binding protein ARUE_c14540 PF00356 Bacterial regulatory proteins, lacI family ARUE_c14540 PF13377 Periplasmic binding protein-like domain ARUE_c14550 PF06762 ARUE_c14550 ARUE_c14560 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ARUE_c14560 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal ARUE_c14560 PF13288 DXP reductoisomerase C-terminal domain ARUE_c14570 PF02163 Peptidase family M50 ARUE_c14570 PF13180 PDZ domain ARUE_c14580 PF03795 YCII-related domain ARUE_c14590 PF04551 GcpE protein ARUE_c14600 PF13312 ARUE_c14600 ARUE_c14620 PF00440 Bacterial regulatory proteins, tetR family ARUE_c14630 PF01061 ARUE_c14630 ARUE_c14640 PF00005 ABC transporter ARUE_c14650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ARUE_c14650 PF03129 Anticodon binding domain ARUE_c14650 PF04073 Aminoacyl-tRNA editing domain ARUE_c14660 PF01925 ARUE_c14660 ARUE_c14670 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase ARUE_c14680 PF01988 ARUE_c14680 ARUE_c14690 PF14530 Domain of unknown function (DUF4439) ARUE_c14700 PF02576 Uncharacterised BCR, YhbC family COG0779 ARUE_c14700 PF17384 ARUE_c14700 ARUE_c14710 PF08529 NusA N-terminal domain ARUE_c14710 PF13184 NusA-like KH domain ARUE_c14720 PF04296 Protein of unknown function (DUF448) ARUE_c14730 PF00009 Elongation factor Tu GTP binding domain ARUE_c14730 PF04760 Translation initiation factor IF-2, N-terminal region ARUE_c14730 PF11987 Translation-initiation factor 2 ARUE_c14740 PF02033 Ribosome-binding factor A ARUE_c14750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ARUE_c14760 PF00155 Aminotransferase class I and II ARUE_c14770 PF01509 TruB family pseudouridylate synthase (N terminal domain) ARUE_c14770 PF09142 tRNA Pseudouridine synthase II, C terminal ARUE_c14770 PF16198 ARUE_c14770 ARUE_c14800 PF01687 Riboflavin kinase ARUE_c14800 PF06574 FAD synthetase ARUE_c14810 PF00312 Ribosomal protein S15 ARUE_c14820 PF00013 KH domain ARUE_c14820 PF00575 S1 RNA binding domain ARUE_c14820 PF01138 3' exoribonuclease family, domain 1 ARUE_c14820 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ARUE_c14830 PF00675 Insulinase (Peptidase family M16) ARUE_c14830 PF05193 Peptidase M16 inactive domain ARUE_c14840 PF07617 ARUE_c14840 ARUE_c14850 PF02597 ThiS family ARUE_c14860 PF04055 Radical SAM superfamily ARUE_c14860 PF06463 Molybdenum Cofactor Synthesis C ARUE_c14860 PF13394 4Fe-4S single cluster domain ARUE_c14870 PF00072 Response regulator receiver domain ARUE_c14870 PF00486 Transcriptional regulatory protein, C terminal ARUE_c14880 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c14880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c14890 PF00174 Oxidoreductase molybdopterin binding domain ARUE_c14900 PF00994 Probable molybdopterin binding domain ARUE_c14900 PF03453 MoeA N-terminal region (domain I and II) ARUE_c14900 PF03454 MoeA C-terminal region (domain IV) ARUE_c14910 PF01967 MoaC family ARUE_c14920 PF00994 Probable molybdopterin binding domain ARUE_c14930 PF02391 MoaE protein ARUE_c14940 PF01113 Dihydrodipicolinate reductase, N-terminus ARUE_c14940 PF05173 Dihydrodipicolinate reductase, C-terminus ARUE_c14960 PF07786 ARUE_c14960 ARUE_c14980 PF00701 Dihydrodipicolinate synthetase family ARUE_c14990 PF00753 Metallo-beta-lactamase superfamily ARUE_c14990 PF07521 RNA-metabolising metallo-beta-lactamase ARUE_c15000 PF01580 FtsK/SpoIIIE family ARUE_c15000 PF09397 Ftsk gamma domain ARUE_c15010 PF01066 CDP-alcohol phosphatidyltransferase ARUE_c15020 PF02464 Competence-damaged protein ARUE_c15030 PF13560 Helix-turn-helix domain ARUE_c15040 PF01047 MarR family ARUE_c15050 PF11248 ARUE_c15050 ARUE_c15060 PF00154 recA bacterial DNA recombination protein ARUE_c15070 PF02631 RecX family ARUE_c15080 PF00919 Uncharacterized protein family UPF0004 ARUE_c15080 PF01938 TRAM domain ARUE_c15080 PF04055 Radical SAM superfamily ARUE_c15090 PF01715 IPP transferase ARUE_c15100 PF01678 Diaminopimelate epimerase ARUE_c15110 PF05175 Methyltransferase small domain ARUE_c15120 PF01926 50S ribosome-binding GTPase ARUE_c15120 PF13167 ARUE_c15120 ARUE_c15120 PF16360 ARUE_c15120 ARUE_c15130 PF00270 DEAD/DEAH box helicase ARUE_c15130 PF13307 Helicase C-terminal domain ARUE_c15140 PF00717 Peptidase S24-like ARUE_c15140 PF01726 LexA DNA binding domain ARUE_c15150 PF01476 LysM domain ARUE_c15160 PF00155 Aminotransferase class I and II ARUE_c15170 PF00475 Imidazoleglycerol-phosphate dehydratase ARUE_c15180 PF00117 Glutamine amidotransferase class-I ARUE_c15190 PF00977 Histidine biosynthesis protein ARUE_c15200 PF07179 ARUE_c15200 ARUE_c15210 PF07690 Major Facilitator Superfamily ARUE_c15230 PF00707 Translation initiation factor IF-3, C-terminal domain ARUE_c15230 PF05198 Translation initiation factor IF-3, N-terminal domain ARUE_c15240 PF01632 Ribosomal protein L35 ARUE_c15250 PF00453 Ribosomal protein L20 ARUE_c15260 PF00588 SpoU rRNA Methylase family ARUE_c15260 PF08032 RNA 2'-O ribose methyltransferase substrate binding ARUE_c15270 PF01545 Cation efflux family ARUE_c15280 PF07690 Major Facilitator Superfamily ARUE_c15290 PF00293 NUDIX domain ARUE_c15300 PF04055 Radical SAM superfamily ARUE_c15310 PF01470 Pyroglutamyl peptidase ARUE_c15320 PF04402 Protein of unknown function (DUF541) ARUE_c15340 PF01409 tRNA synthetases class II core domain (F) ARUE_c15340 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ARUE_c15350 PF01588 Putative tRNA binding domain ARUE_c15350 PF03147 Ferredoxin-fold anticodon binding domain ARUE_c15350 PF03483 B3/4 domain ARUE_c15350 PF03484 tRNA synthetase B5 domain ARUE_c15360 PF00089 Trypsin ARUE_c15370 PF01648 4'-phosphopantetheinyl transferase superfamily ARUE_c15380 PF01433 Peptidase family M1 ARUE_c15390 PF00501 AMP-binding enzyme ARUE_c15390 PF00550 Phosphopantetheine attachment site ARUE_c15400 PF00107 Zinc-binding dehydrogenase ARUE_c15400 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c15410 PF00487 ARUE_c15410 ARUE_c15420 PF01118 Semialdehyde dehydrogenase, NAD binding domain ARUE_c15420 PF02774 Semialdehyde dehydrogenase, dimerisation domain ARUE_c15430 PF01960 ArgJ family ARUE_c15440 PF00696 Amino acid kinase family ARUE_c15450 PF00202 Aminotransferase class-III ARUE_c15460 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ARUE_c15460 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ARUE_c15470 PF01316 Arginine repressor, DNA binding domain ARUE_c15470 PF02863 Arginine repressor, C-terminal domain ARUE_c15480 PF00764 Arginosuccinate synthase ARUE_c15490 PF00206 Lyase ARUE_c15490 PF14698 Argininosuccinate lyase C-terminal ARUE_c15500 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain ARUE_c15510 PF02805 Metal binding domain of Ada ARUE_c15510 PF06029 AlkA N-terminal domain ARUE_c15510 PF12833 Helix-turn-helix domain ARUE_c15520 PF02245 Methylpurine-DNA glycosylase (MPG) ARUE_c15530 PF13245 Part of AAA domain ARUE_c15530 PF13538 UvrD-like helicase C-terminal domain ARUE_c15540 PF00579 tRNA synthetases class I (W and Y) ARUE_c15600 PF13242 HAD-hyrolase-like ARUE_c15600 PF13344 Haloacid dehalogenase-like hydrolase ARUE_c15620 PF01479 S4 domain ARUE_c15620 PF01728 FtsJ-like methyltransferase ARUE_c15630 PF01513 ATP-NAD kinase ARUE_c15640 PF02463 RecF/RecN/SMC N terminal domain ARUE_c15650 PF00117 Glutamine amidotransferase class-I ARUE_c15650 PF06418 CTP synthase N-terminus ARUE_c15660 PF00293 NUDIX domain ARUE_c15670 PF00589 Phage integrase family ARUE_c15670 PF02899 Phage integrase, N-terminal SAM-like domain ARUE_c15690 PF00293 NUDIX domain ARUE_c15700 PF00285 Citrate synthase ARUE_c15710 PF13714 Phosphoenolpyruvate phosphomutase ARUE_c15720 PF03972 MmgE/PrpD family ARUE_c15730 PF00392 Bacterial regulatory proteins, gntR family ARUE_c15730 PF07729 FCD domain ARUE_c15740 PF13847 Methyltransferase domain ARUE_c15750 PF00196 Bacterial regulatory proteins, luxR family ARUE_c15760 PF00072 Response regulator receiver domain ARUE_c15760 PF08279 HTH domain ARUE_c15770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c15770 PF13188 PAS domain ARUE_c15770 PF17203 ARUE_c15770 ARUE_c15780 PF00375 Sodium:dicarboxylate symporter family ARUE_c15790 PF13614 AAA domain ARUE_c15800 PF02616 ScpA/B protein ARUE_c15810 PF04079 Putative transcriptional regulators (Ypuh-like) ARUE_c15820 PF00849 RNA pseudouridylate synthase ARUE_c15820 PF01479 S4 domain ARUE_c15830 PF02153 Prephenate dehydrogenase ARUE_c15840 PF02224 Cytidylate kinase ARUE_c15850 PF01553 Acyltransferase ARUE_c15860 PF01926 50S ribosome-binding GTPase ARUE_c15860 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ARUE_c15880 PF12802 MarR family ARUE_c15890 PF07690 Major Facilitator Superfamily ARUE_c15900 PF01597 Glycine cleavage H-protein ARUE_c15910 PF16697 ARUE_c15910 ARUE_c15920 PF13411 MerR HTH family regulatory protein ARUE_c15930 PF02577 Bifunctional nuclease ARUE_c15940 PF13411 MerR HTH family regulatory protein ARUE_c15950 PF13614 AAA domain ARUE_c15960 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ARUE_c15960 PF00364 Biotin-requiring enzyme ARUE_c15960 PF00682 HMGL-like ARUE_c15960 PF02436 Conserved carboxylase domain ARUE_c15960 PF02785 Biotin carboxylase C-terminal domain ARUE_c15960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ARUE_c15970 PF00501 AMP-binding enzyme ARUE_c15980 PF00480 ROK family ARUE_c16000 PF12146 Putative lysophospholipase ARUE_c16010 PF12146 Putative lysophospholipase ARUE_c16020 PF01553 Acyltransferase ARUE_c16030 PF01474 Class-II DAHP synthetase family ARUE_c16040 PF00069 Protein kinase domain ARUE_c16040 PF03793 PASTA domain ARUE_c16050 PF01464 Transglycosylase SLT domain ARUE_c16050 PF01476 LysM domain ARUE_c16080 PF00348 Polyprenyl synthetase ARUE_c16100 PF00817 impB/mucB/samB family ARUE_c16100 PF11798 IMS family HHH motif ARUE_c16100 PF11799 impB/mucB/samB family C-terminal domain ARUE_c16110 PF11239 ARUE_c16110 ARUE_c16120 PF02381 MraZ protein ARUE_c16130 PF01795 MraW methylase family ARUE_c16150 PF00905 Penicillin binding protein transpeptidase domain ARUE_c16150 PF03717 Penicillin-binding Protein dimerisation domain ARUE_c16160 PF01225 Mur ligase family, catalytic domain ARUE_c16160 PF02875 Mur ligase family, glutamate ligase domain ARUE_c16160 PF08245 Mur ligase middle domain ARUE_c16170 PF01225 Mur ligase family, catalytic domain ARUE_c16170 PF02875 Mur ligase family, glutamate ligase domain ARUE_c16170 PF08245 Mur ligase middle domain ARUE_c16180 PF00953 Glycosyl transferase family 4 ARUE_c16190 PF02875 Mur ligase family, glutamate ligase domain ARUE_c16190 PF08245 Mur ligase middle domain ARUE_c16200 PF01098 ARUE_c16200 ARUE_c16210 PF03033 Glycosyltransferase family 28 N-terminal domain ARUE_c16210 PF04101 Glycosyltransferase family 28 C-terminal domain ARUE_c16220 PF01225 Mur ligase family, catalytic domain ARUE_c16220 PF02875 Mur ligase family, glutamate ligase domain ARUE_c16220 PF08245 Mur ligase middle domain ARUE_c16230 PF03799 Cell division protein FtsQ ARUE_c16230 PF08478 POTRA domain, FtsQ-type ARUE_c16240 PF00091 Tubulin/FtsZ family, GTPase domain ARUE_c16240 PF12327 FtsZ family, C-terminal domain ARUE_c16250 PF02578 Multi-copper polyphenol oxidoreductase laccase ARUE_c16260 PF01168 Alanine racemase, N-terminal domain ARUE_c16270 PF04472 Protein of unknown function (DUF552) ARUE_c16280 PF02325 ARUE_c16280 ARUE_c16290 PF05103 DivIVA protein ARUE_c16300 PF01252 ARUE_c16300 ARUE_c16310 PF00849 RNA pseudouridylate synthase ARUE_c16320 PF01336 OB-fold nucleic acid binding domain ARUE_c16320 PF02811 PHP domain ARUE_c16320 PF07733 Bacterial DNA polymerase III alpha subunit ARUE_c16320 PF14579 Helix-hairpin-helix motif ARUE_c16330 PF01613 Flavin reductase like domain ARUE_c16350 PF00815 Histidinol dehydrogenase ARUE_c16360 PF03477 ATP cone domain ARUE_c16370 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c16380 PF00480 ROK family ARUE_c16390 PF00557 Metallopeptidase family M24 ARUE_c16410 PF02548 Ketopantoate hydroxymethyltransferase ARUE_c16420 PF00120 Glutamine synthetase, catalytic domain ARUE_c16420 PF03951 Glutamine synthetase, beta-Grasp domain ARUE_c16430 PF03710 Glutamate-ammonia ligase adenylyltransferase ARUE_c16430 PF08335 GlnD PII-uridylyltransferase ARUE_c16440 PF00884 Sulfatase ARUE_c16450 PF00583 Acetyltransferase (GNAT) family ARUE_c16480 PF00120 Glutamine synthetase, catalytic domain ARUE_c16480 PF03951 Glutamine synthetase, beta-Grasp domain ARUE_c16490 PF06271 ARUE_c16490 ARUE_c16500 PF13829 ARUE_c16500 ARUE_c16510 PF04055 Radical SAM superfamily ARUE_c16510 PF16881 ARUE_c16510 ARUE_c16520 PF03099 Biotin/lipoate A/B protein ligase family ARUE_c16530 PF00069 Protein kinase domain ARUE_c16540 PF01370 NAD dependent epimerase/dehydratase family ARUE_c16540 PF08338 Domain of unknown function (DUF1731) ARUE_c16550 PF03572 Peptidase family S41 ARUE_c16550 PF07676 WD40-like Beta Propeller Repeat ARUE_c16550 PF14684 Tricorn protease C1 domain ARUE_c16550 PF14685 Tricorn protease PDZ domain ARUE_c16560 PF02566 OsmC-like protein ARUE_c16590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ARUE_c16590 PF00364 Biotin-requiring enzyme ARUE_c16590 PF02817 e3 binding domain ARUE_c16600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ARUE_c16600 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c16610 PF00883 Cytosol aminopeptidase family, catalytic domain ARUE_c16610 PF02789 Cytosol aminopeptidase family, N-terminal domain ARUE_c16620 PF09754 PAC2 family ARUE_c16630 PF07690 Major Facilitator Superfamily ARUE_c16640 PF13830 ARUE_c16640 ARUE_c16650 PF00140 Sigma-70 factor, region 1 ARUE_c16650 PF04539 Sigma-70 region 3 ARUE_c16650 PF04542 Sigma-70 region 2 ARUE_c16650 PF04545 Sigma-70, region 4 ARUE_c16670 PF00204 DNA gyrase B ARUE_c16670 PF00986 DNA gyrase B subunit, carboxyl terminus ARUE_c16670 PF01751 Toprim domain ARUE_c16670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c16680 PF07690 Major Facilitator Superfamily ARUE_c16700 PF01435 Peptidase family M48 ARUE_c16710 PF03965 Penicillinase repressor ARUE_c16720 PF01654 ARUE_c16720 ARUE_c16730 PF02322 ARUE_c16730 ARUE_c16740 PF00005 ABC transporter ARUE_c16740 PF00664 ABC transporter transmembrane region ARUE_c16750 PF00583 Acetyltransferase (GNAT) family ARUE_c16760 PF12867 DinB superfamily ARUE_c16780 PF00521 DNA gyrase/topoisomerase IV, subunit A ARUE_c16780 PF03989 DNA gyrase C-terminal domain, beta-propeller ARUE_c16790 PF00583 Acetyltransferase (GNAT) family ARUE_c16790 PF13380 CoA binding domain ARUE_c16790 PF13549 ATP-grasp domain ARUE_c16790 PF13607 Succinyl-CoA ligase like flavodoxin domain ARUE_c16810 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase ARUE_c16820 PF00265 Thymidine kinase ARUE_c16830 PF11268 ARUE_c16830 ARUE_c16840 PF13834 ARUE_c16840 ARUE_c16850 PF11292 ARUE_c16850 ARUE_c16860 PF00692 dUTPase ARUE_c16870 PF12502 ARUE_c16870 ARUE_c16890 PF11361 ARUE_c16890 ARUE_c16900 PF02080 TrkA-C domain ARUE_c16900 PF02254 TrkA-N domain ARUE_c16910 PF02254 TrkA-N domain ARUE_c16920 PF13520 Amino acid permease ARUE_c16930 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) ARUE_c16930 PF05958 tRNA (Uracil-5-)-methyltransferase ARUE_c16940 PF00330 Aconitase family (aconitate hydratase) ARUE_c16940 PF00694 Aconitase C-terminal domain ARUE_c16950 PF02779 Transketolase, pyrimidine binding domain ARUE_c16950 PF02780 Transketolase, C-terminal domain ARUE_c16950 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ARUE_c16960 PF04167 Protein of unknown function (DUF402) ARUE_c16990 PF00248 Aldo/keto reductase family ARUE_c17000 PF00378 Enoyl-CoA hydratase/isomerase family ARUE_c17000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ARUE_c17000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ARUE_c17010 PF00108 Thiolase, N-terminal domain ARUE_c17010 PF02803 Thiolase, C-terminal domain ARUE_c17020 PF00570 HRDC domain ARUE_c17020 PF01612 3'-5' exonuclease ARUE_c17030 PF11452 ARUE_c17030 ARUE_c17040 PF01212 Beta-eliminating lyase ARUE_c17050 PF00106 short chain dehydrogenase ARUE_c17070 PF01641 SelR domain ARUE_c17090 PF00326 Prolyl oligopeptidase family ARUE_c17100 PF04073 Aminoacyl-tRNA editing domain ARUE_c17110 PF02657 Fe-S metabolism associated domain ARUE_c17120 PF00581 Rhodanese-like domain ARUE_c17130 PF03969 AFG1-like ATPase ARUE_c17140 PF03594 ARUE_c17140 ARUE_c17150 PF14013 ARUE_c17150 ARUE_c17160 PF13520 Amino acid permease ARUE_c17230 PF01327 Polypeptide deformylase ARUE_c17240 PF00551 Formyl transferase ARUE_c17240 PF02911 Formyl transferase, C-terminal domain ARUE_c17250 PF01029 NusB family ARUE_c17250 PF01189 NOL1/NOP2/sun family ARUE_c17260 PF00834 Ribulose-phosphate 3 epimerase family ARUE_c17270 PF04973 ARUE_c17270 ARUE_c17280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ARUE_c17280 PF01872 RibD C-terminal domain ARUE_c17290 PF00677 Lumazine binding domain ARUE_c17300 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ARUE_c17310 PF00925 GTP cyclohydrolase II ARUE_c17320 PF00885 6,7-dimethyl-8-ribityllumazine synthase ARUE_c17330 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ARUE_c17340 PF01634 ATP phosphoribosyltransferase ARUE_c17340 PF08029 HisG, C-terminal domain ARUE_c17350 PF00977 Histidine biosynthesis protein ARUE_c17360 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain ARUE_c17370 PF01502 Phosphoribosyl-AMP cyclohydrolase ARUE_c17380 PF00425 chorismate binding enzyme ARUE_c17380 PF04715 Anthranilate synthase component I, N terminal region ARUE_c17390 PF09534 ARUE_c17390 ARUE_c17410 PF00218 Indole-3-glycerol phosphate synthase ARUE_c17420 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c17430 PF00290 Tryptophan synthase alpha chain ARUE_c17440 PF01790 ARUE_c17440 ARUE_c17450 PF00310 Glutamine amidotransferases class-II ARUE_c17450 PF01493 GXGXG motif ARUE_c17450 PF01645 Conserved region in glutamate synthase ARUE_c17450 PF04898 Glutamate synthase central domain ARUE_c17460 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c17460 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ARUE_c17470 PF00224 Pyruvate kinase, barrel domain ARUE_c17470 PF02887 Pyruvate kinase, alpha/beta domain ARUE_c17480 PF00072 Response regulator receiver domain ARUE_c17480 PF03861 ANTAR domain ARUE_c17520 PF00931 NB-ARC domain ARUE_c17520 PF13374 Tetratricopeptide repeat ARUE_c17520 PF13424 Tetratricopeptide repeat ARUE_c17540 PF13830 ARUE_c17540 ARUE_c17600 PF13091 PLD-like domain ARUE_c17630 PF14279 ARUE_c17630 ARUE_c17650 PF01261 Xylose isomerase-like TIM barrel ARUE_c17670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c17670 PF03466 LysR substrate binding domain ARUE_c17680 PF01547 Bacterial extracellular solute-binding protein ARUE_c17690 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c17700 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c17710 PF01261 Xylose isomerase-like TIM barrel ARUE_c17720 PF00732 GMC oxidoreductase ARUE_c17720 PF05199 GMC oxidoreductase ARUE_c17750 PF01261 Xylose isomerase-like TIM barrel ARUE_c17760 PF13577 SnoaL-like domain ARUE_c17780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c17780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c17790 PF01261 Xylose isomerase-like TIM barrel ARUE_c17790 PF07582 AP endonuclease family 2 C terminus ARUE_c17800 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c17830 PF00480 ROK family ARUE_c17840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c17860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c17870 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c17880 PF04199 Putative cyclase ARUE_c17890 PF01494 FAD binding domain ARUE_c17900 PF04909 Amidohydrolase ARUE_c17910 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c17920 PF07690 Major Facilitator Superfamily ARUE_c17930 PF00732 GMC oxidoreductase ARUE_c17930 PF05199 GMC oxidoreductase ARUE_c17940 PF03795 YCII-related domain ARUE_c17950 PF00583 Acetyltransferase (GNAT) family ARUE_c17960 PF00440 Bacterial regulatory proteins, tetR family ARUE_c17970 PF00109 Beta-ketoacyl synthase, N-terminal domain ARUE_c17970 PF02801 Beta-ketoacyl synthase, C-terminal domain ARUE_c17980 PF00440 Bacterial regulatory proteins, tetR family ARUE_c17980 PF16914 ARUE_c17980 ARUE_c18000 PF13744 Helix-turn-helix domain ARUE_c18010 PF00440 Bacterial regulatory proteins, tetR family ARUE_c18030 PF02954 Bacterial regulatory protein, Fis family ARUE_c18040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c18040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c18050 PF00202 Aminotransferase class-III ARUE_c18060 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c18070 PF01968 Hydantoinase/oxoprolinase ARUE_c18070 PF05378 ARUE_c18070 ARUE_c18080 PF02538 ARUE_c18080 ARUE_c18090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c18100 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c18100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c18100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c18110 PF00171 Aldehyde dehydrogenase family ARUE_c18120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c18120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c18130 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c18140 PF00920 Dehydratase family ARUE_c18150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c18160 PF13520 Amino acid permease ARUE_c18170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c18180 PF00005 ABC transporter ARUE_c18190 PF02653 ARUE_c18190 ARUE_c18200 PF13407 Periplasmic binding protein domain ARUE_c18210 PF01565 FAD binding domain ARUE_c18210 PF02754 ARUE_c18210 ARUE_c18210 PF02913 FAD linked oxidases, C-terminal domain ARUE_c18210 PF13183 4Fe-4S dicluster domain ARUE_c18230 PF02682 Allophanate hydrolase subunit 1 ARUE_c18240 PF00440 Bacterial regulatory proteins, tetR family ARUE_c18250 PF13520 Amino acid permease ARUE_c18270 PF08751 TrwC relaxase ARUE_c18290 PF01566 ARUE_c18290 ARUE_c18300 PF13370 4Fe-4S single cluster domain ARUE_c18310 PF00067 Cytochrome P450 ARUE_c18320 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c18320 PF14759 Reductase C-terminal ARUE_c18330 PF07690 Major Facilitator Superfamily ARUE_c18340 PF00440 Bacterial regulatory proteins, tetR family ARUE_c18350 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c18360 PF00107 Zinc-binding dehydrogenase ARUE_c18360 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c18370 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c18380 PF08450 SMP-30/Gluconolaconase/LRE-like region ARUE_c18390 PF01614 Bacterial transcriptional regulator ARUE_c18390 PF09339 IclR helix-turn-helix domain ARUE_c18400 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c18410 PF01565 FAD binding domain ARUE_c18410 PF02754 ARUE_c18410 ARUE_c18410 PF02913 FAD linked oxidases, C-terminal domain ARUE_c18410 PF13183 4Fe-4S dicluster domain ARUE_c18420 PF00920 Dehydratase family ARUE_c18430 PF04616 Glycosyl hydrolases family 43 ARUE_c18440 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c18440 PF01915 Glycosyl hydrolase family 3 C-terminal domain ARUE_c18440 PF14310 Fibronectin type III-like domain ARUE_c18450 PF05592 Bacterial alpha-L-rhamnosidase ARUE_c18450 PF08531 Alpha-L-rhamnosidase N-terminal domain ARUE_c18450 PF17389 ARUE_c18450 ARUE_c18450 PF17390 ARUE_c18450 ARUE_c18460 PF13204 Protein of unknown function (DUF4038) ARUE_c18460 PF16586 ARUE_c18460 ARUE_c18470 PF00356 Bacterial regulatory proteins, lacI family ARUE_c18470 PF13377 Periplasmic binding protein-like domain ARUE_c18480 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c18490 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c18500 PF13416 Bacterial extracellular solute-binding protein ARUE_c18510 PF00005 ABC transporter ARUE_c18520 PF05592 Bacterial alpha-L-rhamnosidase ARUE_c18520 PF08531 Alpha-L-rhamnosidase N-terminal domain ARUE_c18520 PF17389 ARUE_c18520 ARUE_c18520 PF17390 ARUE_c18520 ARUE_c18530 PF07690 Major Facilitator Superfamily ARUE_c18540 PF00232 Glycosyl hydrolase family 1 ARUE_c18560 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c18570 PF13347 MFS/sugar transport protein ARUE_c18580 PF00440 Bacterial regulatory proteins, tetR family ARUE_c18600 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain ARUE_c18600 PF16896 ARUE_c18600 ARUE_c18610 PF01261 Xylose isomerase-like TIM barrel ARUE_c18620 PF00121 Triosephosphate isomerase ARUE_c18630 PF02502 Ribose/Galactose Isomerase ARUE_c18640 PF02733 Dak1 domain ARUE_c18640 PF02734 DAK2 domain ARUE_c18650 PF07690 Major Facilitator Superfamily ARUE_c18660 PF00392 Bacterial regulatory proteins, gntR family ARUE_c18660 PF07729 FCD domain ARUE_c18670 PF00440 Bacterial regulatory proteins, tetR family ARUE_c18670 PF13977 Bacterial transcriptional repressor ARUE_c18680 PF07690 Major Facilitator Superfamily ARUE_c18690 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c18700 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c18700 PF01915 Glycosyl hydrolase family 3 C-terminal domain ARUE_c18700 PF14310 Fibronectin type III-like domain ARUE_c18710 PF01156 Inosine-uridine preferring nucleoside hydrolase ARUE_c18720 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c18720 PF01915 Glycosyl hydrolase family 3 C-terminal domain ARUE_c18720 PF14310 Fibronectin type III-like domain ARUE_c18740 PF01161 Phosphatidylethanolamine-binding protein ARUE_c18750 PF03358 NADPH-dependent FMN reductase ARUE_c18760 PF00106 short chain dehydrogenase ARUE_c18770 PF00440 Bacterial regulatory proteins, tetR family ARUE_c18780 PF00378 Enoyl-CoA hydratase/isomerase family ARUE_c18800 PF00440 Bacterial regulatory proteins, tetR family ARUE_c18810 PF04303 PrpF protein ARUE_c18820 PF00171 Aldehyde dehydrogenase family ARUE_c18830 PF02515 CoA-transferase family III ARUE_c18840 PF02515 CoA-transferase family III ARUE_c18850 PF00440 Bacterial regulatory proteins, tetR family ARUE_c18860 PF00440 Bacterial regulatory proteins, tetR family ARUE_c18870 PF00067 Cytochrome P450 ARUE_c18880 PF00106 short chain dehydrogenase ARUE_c18900 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c18900 PF14759 Reductase C-terminal ARUE_c18910 PF12680 SnoaL-like domain ARUE_c18970 PF01796 ARUE_c18970 ARUE_c18970 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) ARUE_c18980 PF00106 short chain dehydrogenase ARUE_c18990 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c19000 PF00108 Thiolase, N-terminal domain ARUE_c19000 PF02803 Thiolase, C-terminal domain ARUE_c19010 PF01796 ARUE_c19010 ARUE_c19020 PF00378 Enoyl-CoA hydratase/isomerase family ARUE_c19040 PF13830 ARUE_c19040 ARUE_c19060 PF13304 AAA domain ARUE_c19080 PF00083 Sugar (and other) transporter ARUE_c19090 PF07905 ARUE_c19090 ARUE_c19090 PF13556 PucR C-terminal helix-turn-helix domain ARUE_c19100 PF06865 Protein of unknown function (DUF1255) ARUE_c19120 PF13404 AsnC-type helix-turn-helix domain ARUE_c19130 PF16481 ARUE_c19130 ARUE_c19150 PF07687 Peptidase dimerisation domain ARUE_c19160 PF04199 Putative cyclase ARUE_c19180 PF06808 ARUE_c19180 ARUE_c19190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c19190 PF09130 Domain of unknown function (DUF1932) ARUE_c19200 PF03737 Demethylmenaquinone methyltransferase ARUE_c19210 PF03401 Tripartite tricarboxylate transporter family receptor ARUE_c19220 PF01970 ARUE_c19220 ARUE_c19230 PF07331 ARUE_c19230 ARUE_c19240 PF01614 Bacterial transcriptional regulator ARUE_c19240 PF09339 IclR helix-turn-helix domain ARUE_c19250 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c19260 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c19270 PF00149 Calcineurin-like phosphoesterase ARUE_c19280 PF13350 Tyrosine phosphatase family ARUE_c19290 PF13416 Bacterial extracellular solute-binding protein ARUE_c19300 PF00005 ABC transporter ARUE_c19300 PF08402 TOBE domain ARUE_c19310 PF01380 SIS domain ARUE_c19310 PF01418 Helix-turn-helix domain, rpiR family ARUE_c19330 PF00005 ABC transporter ARUE_c19340 PF12900 Pyridoxamine 5'-phosphate oxidase ARUE_c19360 PF14333 ARUE_c19360 ARUE_c19380 PF00005 ABC transporter ARUE_c19390 PF00582 Universal stress protein family ARUE_c19400 PF00258 Flavodoxin ARUE_c19410 PF11239 ARUE_c19410 ARUE_c19420 PF07411 Domain of unknown function (DUF1508) ARUE_c19430 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c19440 PF00582 Universal stress protein family ARUE_c19450 PF12900 Pyridoxamine 5'-phosphate oxidase ARUE_c19460 PF00582 Universal stress protein family ARUE_c19470 PF00753 Metallo-beta-lactamase superfamily ARUE_c19470 PF07521 RNA-metabolising metallo-beta-lactamase ARUE_c19470 PF10996 Beta-Casp domain ARUE_c19480 PF03779 ARUE_c19480 ARUE_c19490 PF00072 Response regulator receiver domain ARUE_c19490 PF00196 Bacterial regulatory proteins, luxR family ARUE_c19500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c19500 PF07730 Histidine kinase ARUE_c19500 PF13185 GAF domain ARUE_c19510 PF12900 Pyridoxamine 5'-phosphate oxidase ARUE_c19520 PF12900 Pyridoxamine 5'-phosphate oxidase ARUE_c19530 PF00107 Zinc-binding dehydrogenase ARUE_c19530 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c19540 PF00122 E1-E2 ATPase ARUE_c19540 PF00702 haloacid dehalogenase-like hydrolase ARUE_c19560 PF01515 Phosphate acetyl/butaryl transferase ARUE_c19560 PF07085 DRTGG domain ARUE_c19560 PF13500 AAA domain ARUE_c19570 PF00582 Universal stress protein family ARUE_c19580 PF00689 Cation transporting ATPase, C-terminus ARUE_c19590 PF12900 Pyridoxamine 5'-phosphate oxidase ARUE_c19600 PF00582 Universal stress protein family ARUE_c19610 PF00871 Acetokinase family ARUE_c19620 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase ARUE_c19620 PF09363 XFP C-terminal domain ARUE_c19620 PF09364 XFP N-terminal domain ARUE_c19650 PF03313 ARUE_c19650 ARUE_c19650 PF03315 Serine dehydratase beta chain ARUE_c19660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c19660 PF03466 LysR substrate binding domain ARUE_c19670 PF01037 AsnC family ARUE_c19670 PF13404 AsnC-type helix-turn-helix domain ARUE_c19680 PF07690 Major Facilitator Superfamily ARUE_c19690 PF01546 Peptidase family M20/M25/M40 ARUE_c19690 PF07687 Peptidase dimerisation domain ARUE_c19700 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c19710 PF01261 Xylose isomerase-like TIM barrel ARUE_c19730 PF07690 Major Facilitator Superfamily ARUE_c19740 PF13671 AAA domain ARUE_c19750 PF01081 KDPG and KHG aldolase ARUE_c19760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c19770 PF00356 Bacterial regulatory proteins, lacI family ARUE_c19770 PF13377 Periplasmic binding protein-like domain ARUE_c19780 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c19790 PF01261 Xylose isomerase-like TIM barrel ARUE_c19800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c19810 PF07690 Major Facilitator Superfamily ARUE_c19820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c19820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c19830 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c19850 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c19860 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c19870 PF01547 Bacterial extracellular solute-binding protein ARUE_c19880 PF06772 ARUE_c19880 ARUE_c19900 PF01613 Flavin reductase like domain ARUE_c19910 PF01717 Cobalamin-independent synthase, Catalytic domain ARUE_c19920 PF08908 ARUE_c19920 ARUE_c19930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c19950 PF00248 Aldo/keto reductase family ARUE_c19970 PF06736 ARUE_c19970 ARUE_c19980 PF00199 Catalase ARUE_c19980 PF06628 Catalase-related immune-responsive ARUE_c20000 PF00107 Zinc-binding dehydrogenase ARUE_c20000 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c20010 PF00107 Zinc-binding dehydrogenase ARUE_c20010 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c20010 PF13823 Alcohol dehydrogenase GroES-associated ARUE_c20030 PF00563 EAL domain ARUE_c20040 PF12833 Helix-turn-helix domain ARUE_c20060 PF13556 PucR C-terminal helix-turn-helix domain ARUE_c20070 PF00027 Cyclic nucleotide-binding domain ARUE_c20070 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c20080 PF00012 Hsp70 protein ARUE_c20090 PF01025 GrpE ARUE_c20100 PF00226 DnaJ domain ARUE_c20100 PF01556 DnaJ C terminal domain ARUE_c20110 PF13591 MerR HTH family regulatory protein ARUE_c20120 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c20120 PF02861 Clp amino terminal domain ARUE_c20120 PF07724 AAA domain (Cdc48 subfamily) ARUE_c20120 PF10431 C-terminal, D2-small domain, of ClpB protein ARUE_c20130 PF00085 Thioredoxin ARUE_c20140 PF13731 ARUE_c20140 ARUE_c20150 PF06030 ARUE_c20150 ARUE_c20160 PF12833 Helix-turn-helix domain ARUE_c20170 PF00480 ROK family ARUE_c20180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c20180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c20190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c20200 PF02653 ARUE_c20200 ARUE_c20210 PF13407 Periplasmic binding protein domain ARUE_c20220 PF01261 Xylose isomerase-like TIM barrel ARUE_c20230 PF01261 Xylose isomerase-like TIM barrel ARUE_c20240 PF00005 ABC transporter ARUE_c20250 PF01261 Xylose isomerase-like TIM barrel ARUE_c20250 PF07582 AP endonuclease family 2 C terminus ARUE_c20260 PF00391 PEP-utilising enzyme, mobile domain ARUE_c20260 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ARUE_c20260 PF02896 PEP-utilising enzyme, TIM barrel domain ARUE_c20270 PF03618 ARUE_c20270 ARUE_c20280 PF02661 Fic/DOC family ARUE_c20290 PF12833 Helix-turn-helix domain ARUE_c20290 PF14525 ARUE_c20290 ARUE_c20300 PF00795 Carbon-nitrogen hydrolase ARUE_c20310 PF13816 Haem-containing dehydratase ARUE_c20320 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c20320 PF01915 Glycosyl hydrolase family 3 C-terminal domain ARUE_c20320 PF14310 Fibronectin type III-like domain ARUE_c20330 PF00534 Glycosyl transferases group 1 ARUE_c20330 PF06925 ARUE_c20330 ARUE_c20340 PF00781 Diacylglycerol kinase catalytic domain ARUE_c20350 PF00107 Zinc-binding dehydrogenase ARUE_c20350 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c20360 PF07005 Protein of unknown function, DUF1537 ARUE_c20360 PF17042 ARUE_c20360 ARUE_c20370 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain ARUE_c20370 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain ARUE_c20380 PF03812 ARUE_c20380 ARUE_c20390 PF00392 Bacterial regulatory proteins, gntR family ARUE_c20390 PF07702 UTRA domain ARUE_c20410 PF01345 ARUE_c20410 ARUE_c20420 PF00746 ARUE_c20420 ARUE_c20420 PF16569 ARUE_c20420 ARUE_c20430 PF04203 Sortase family ARUE_c20440 PF04542 Sigma-70 region 2 ARUE_c20440 PF08281 Sigma-70, region 4 ARUE_c20450 PF00456 Transketolase, thiamine diphosphate binding domain ARUE_c20460 PF01979 Amidohydrolase family ARUE_c20470 PF01212 Beta-eliminating lyase ARUE_c20480 PF00005 ABC transporter ARUE_c20480 PF08402 TOBE domain ARUE_c20490 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c20500 PF01547 Bacterial extracellular solute-binding protein ARUE_c20510 PF00440 Bacterial regulatory proteins, tetR family ARUE_c20520 PF00083 Sugar (and other) transporter ARUE_c20520 PF07690 Major Facilitator Superfamily ARUE_c20530 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ARUE_c20540 PF00941 FAD binding domain in molybdopterin dehydrogenase ARUE_c20550 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_c20550 PF01799 [2Fe-2S] binding domain ARUE_c20560 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ARUE_c20560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ARUE_c20570 PF02625 XdhC and CoxI family ARUE_c20570 PF13478 XdhC Rossmann domain ARUE_c20580 PF00171 Aldehyde dehydrogenase family ARUE_c20590 PF01042 Endoribonuclease L-PSP ARUE_c20600 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_c20600 PF00175 Oxidoreductase NAD-binding domain ARUE_c20600 PF00970 Oxidoreductase FAD-binding domain ARUE_c20610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c20620 PF00561 alpha/beta hydrolase fold ARUE_c20630 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c20640 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c20650 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c20650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c20650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c20670 PF00355 Rieske [2Fe-2S] domain ARUE_c20680 PF07883 Cupin domain ARUE_c20690 PF12802 MarR family ARUE_c20700 PF01958 Domain of unknown function DUF108 ARUE_c20700 PF03447 Homoserine dehydrogenase, NAD binding domain ARUE_c20710 PF00202 Aminotransferase class-III ARUE_c20720 PF07905 ARUE_c20720 ARUE_c20720 PF13556 PucR C-terminal helix-turn-helix domain ARUE_c20730 PF00171 Aldehyde dehydrogenase family ARUE_c20740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ARUE_c20740 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c20760 PF11290 ARUE_c20760 ARUE_c20770 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c20780 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c20790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c20790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c20800 PF00155 Aminotransferase class I and II ARUE_c20820 PF05661 ARUE_c20820 ARUE_c20830 PF01965 DJ-1/PfpI family ARUE_c20840 PF00356 Bacterial regulatory proteins, lacI family ARUE_c20840 PF13377 Periplasmic binding protein-like domain ARUE_c20850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c20860 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c20870 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c20880 PF00005 ABC transporter ARUE_c20880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c20890 PF00005 ABC transporter ARUE_c20890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c20900 PF00251 Glycosyl hydrolases family 32 N-terminal domain ARUE_c20900 PF08244 Glycosyl hydrolases family 32 C terminal ARUE_c20910 PF00251 Glycosyl hydrolases family 32 N-terminal domain ARUE_c20910 PF08244 Glycosyl hydrolases family 32 C terminal ARUE_c20920 PF00294 pfkB family carbohydrate kinase ARUE_c20930 PF00005 ABC transporter ARUE_c20940 PF00950 ARUE_c20940 ARUE_c20960 PF01297 Periplasmic solute binding protein family ARUE_c20980 PF07158 ARUE_c20980 ARUE_c20990 PF04303 PrpF protein ARUE_c21000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c21000 PF03466 LysR substrate binding domain ARUE_c21020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c21020 PF03466 LysR substrate binding domain ARUE_c21030 PF00501 AMP-binding enzyme ARUE_c21030 PF13193 AMP-binding enzyme C-terminal domain ARUE_c21050 PF00083 Sugar (and other) transporter ARUE_c21050 PF07690 Major Facilitator Superfamily ARUE_c21060 PF04199 Putative cyclase ARUE_c21070 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c21070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c21070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c21080 PF06202 Amylo-alpha-1,6-glucosidase ARUE_c21080 PF14742 ARUE_c21080 ARUE_c21090 PF05899 Protein of unknown function (DUF861) ARUE_c21100 PF00392 Bacterial regulatory proteins, gntR family ARUE_c21100 PF07729 FCD domain ARUE_c21110 PF00171 Aldehyde dehydrogenase family ARUE_c21120 PF00202 Aminotransferase class-III ARUE_c21130 PF01266 FAD dependent oxidoreductase ARUE_c21140 PF00005 ABC transporter ARUE_c21150 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c21160 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c21180 PF01266 FAD dependent oxidoreductase ARUE_c21190 PF00171 Aldehyde dehydrogenase family ARUE_c21200 PF00180 Isocitrate/isopropylmalate dehydrogenase ARUE_c21210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c21210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c21220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c21230 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c21240 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c21250 PF00005 ABC transporter ARUE_c21260 PF00487 ARUE_c21260 ARUE_c21270 PF03861 ANTAR domain ARUE_c21270 PF13185 GAF domain ARUE_c21280 PF13185 GAF domain ARUE_c21290 PF14552 Tautomerase enzyme ARUE_c21300 PF00294 pfkB family carbohydrate kinase ARUE_c21320 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c21320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c21320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c21330 PF00171 Aldehyde dehydrogenase family ARUE_c21340 PF01261 Xylose isomerase-like TIM barrel ARUE_c21350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21360 PF01261 Xylose isomerase-like TIM barrel ARUE_c21370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c21380 PF01261 Xylose isomerase-like TIM barrel ARUE_c21380 PF07582 AP endonuclease family 2 C terminus ARUE_c21390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c21400 PF00356 Bacterial regulatory proteins, lacI family ARUE_c21400 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ARUE_c21410 PF13407 Periplasmic binding protein domain ARUE_c21420 PF02653 ARUE_c21420 ARUE_c21430 PF00005 ABC transporter ARUE_c21440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c21470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c21480 PF04962 KduI/IolB family ARUE_c21490 PF00392 Bacterial regulatory proteins, gntR family ARUE_c21490 PF07702 UTRA domain ARUE_c21500 PF06150 ChaB ARUE_c21510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ARUE_c21510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ARUE_c21520 PF00501 AMP-binding enzyme ARUE_c21520 PF00561 alpha/beta hydrolase fold ARUE_c21530 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ARUE_c21540 PF13520 Amino acid permease ARUE_c21550 PF00753 Metallo-beta-lactamase superfamily ARUE_c21560 PF11160 ARUE_c21560 ARUE_c21570 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c21580 PF00313 'Cold-shock' DNA-binding domain ARUE_c21590 PF00999 Sodium/hydrogen exchanger family ARUE_c21600 PF01872 RibD C-terminal domain ARUE_c21620 PF12957 ARUE_c21620 ARUE_c21630 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c21630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c21630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c21640 PF00005 ABC transporter ARUE_c21650 PF12680 SnoaL-like domain ARUE_c21660 PF01042 Endoribonuclease L-PSP ARUE_c21670 PF00472 RF-1 domain ARUE_c21680 PF00005 ABC transporter ARUE_c21690 PF01497 Periplasmic binding protein ARUE_c21700 PF01032 FecCD transport family ARUE_c21720 PF01872 RibD C-terminal domain ARUE_c21740 PF16242 ARUE_c21740 ARUE_c21750 PF01258 Prokaryotic dksA/traR C4-type zinc finger ARUE_c21780 PF01872 RibD C-terminal domain ARUE_c21790 PF07690 Major Facilitator Superfamily ARUE_c21800 PF05762 VWA domain containing CoxE-like protein ARUE_c21820 PF07728 AAA domain (dynein-related subfamily) ARUE_c21840 PF04434 ARUE_c21840 ARUE_c21850 PF01494 FAD binding domain ARUE_c21850 PF07976 Phenol hydroxylase, C-terminal dimerisation domain ARUE_c21860 PF01367 5'-3' exonuclease, C-terminal SAM fold ARUE_c21860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ARUE_c21870 PF02861 Clp amino terminal domain ARUE_c21890 PF03795 YCII-related domain ARUE_c21900 PF04542 Sigma-70 region 2 ARUE_c21900 PF08281 Sigma-70, region 4 ARUE_c21910 PF02720 ARUE_c21910 ARUE_c21930 PF13560 Helix-turn-helix domain ARUE_c21940 PF00107 Zinc-binding dehydrogenase ARUE_c21940 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c21950 PF00270 DEAD/DEAH box helicase ARUE_c21950 PF00271 Helicase conserved C-terminal domain ARUE_c21950 PF04408 Helicase associated domain (HA2) ARUE_c21950 PF08482 ARUE_c21950 ARUE_c21960 PF07969 Amidohydrolase family ARUE_c21970 PF13520 Amino acid permease ARUE_c21980 PF00440 Bacterial regulatory proteins, tetR family ARUE_c21980 PF02909 Tetracyclin repressor, C-terminal all-alpha domain ARUE_c21990 PF13398 Peptidase M50B-like ARUE_c22000 PF00009 Elongation factor Tu GTP binding domain ARUE_c22000 PF00679 Elongation factor G C-terminus ARUE_c22000 PF03144 Elongation factor Tu domain 2 ARUE_c22000 PF03764 Elongation factor G, domain IV ARUE_c22000 PF14492 Elongation Factor G, domain II ARUE_c22010 PF01738 Dienelactone hydrolase family ARUE_c22030 PF00144 Beta-lactamase ARUE_c22040 PF01300 Telomere recombination ARUE_c22050 PF12730 ARUE_c22050 ARUE_c22060 PF00005 ABC transporter ARUE_c22070 PF09865 ARUE_c22070 ARUE_c22080 PF01869 BadF/BadG/BcrA/BcrD ATPase family ARUE_c22100 PF00392 Bacterial regulatory proteins, gntR family ARUE_c22100 PF07702 UTRA domain ARUE_c22110 PF07848 PaaX-like protein ARUE_c22110 PF08223 PaaX-like protein C-terminal domain ARUE_c22120 PF00266 Aminotransferase class-V ARUE_c22130 PF03301 Tryptophan 2,3-dioxygenase ARUE_c22150 PF01384 ARUE_c22150 ARUE_c22180 PF01872 RibD C-terminal domain ARUE_c22190 PF03061 Thioesterase superfamily ARUE_c22200 PF00476 DNA polymerase family A ARUE_c22200 PF01367 5'-3' exonuclease, C-terminal SAM fold ARUE_c22200 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ARUE_c22210 PF13527 Acetyltransferase (GNAT) domain ARUE_c22210 PF13530 Sterol carrier protein domain ARUE_c22220 PF01522 Polysaccharide deacetylase ARUE_c22240 PF00575 S1 RNA binding domain ARUE_c22250 PF01205 Uncharacterized protein family UPF0029 ARUE_c22260 PF01121 Dephospho-CoA kinase ARUE_c22260 PF04229 GrpB protein ARUE_c22270 PF00271 Helicase conserved C-terminal domain ARUE_c22270 PF02151 UvrB/uvrC motif ARUE_c22270 PF04851 Type III restriction enzyme, res subunit ARUE_c22270 PF12344 Ultra-violet resistance protein B ARUE_c22280 PF03741 ARUE_c22280 ARUE_c22290 PF07690 Major Facilitator Superfamily ARUE_c22300 PF00561 alpha/beta hydrolase fold ARUE_c22310 PF00583 Acetyltransferase (GNAT) family ARUE_c22330 PF00270 DEAD/DEAH box helicase ARUE_c22330 PF00271 Helicase conserved C-terminal domain ARUE_c22330 PF12029 ARUE_c22330 ARUE_c22340 PF13649 Methyltransferase domain ARUE_c22360 PF00392 Bacterial regulatory proteins, gntR family ARUE_c22370 PF00005 ABC transporter ARUE_c22380 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c22390 PF01553 Acyltransferase ARUE_c22400 PF01541 GIY-YIG catalytic domain ARUE_c22400 PF02151 UvrB/uvrC motif ARUE_c22400 PF08459 UvrC Helix-hairpin-helix N-terminal ARUE_c22400 PF12826 Helix-hairpin-helix motif ARUE_c22410 PF03668 ARUE_c22410 ARUE_c22420 PF01933 Uncharacterised protein family UPF0052 ARUE_c22430 PF02650 WhiA C-terminal HTH domain ARUE_c22430 PF10298 WhiA N-terminal LAGLIDADG-like domain ARUE_c22430 PF14527 WhiA LAGLIDADG-like domain ARUE_c22440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ARUE_c22440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ARUE_c22450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ARUE_c22450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ARUE_c22460 PF00162 Phosphoglycerate kinase ARUE_c22470 PF00121 Triosephosphate isomerase ARUE_c22480 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ARUE_c22490 PF10128 ARUE_c22490 ARUE_c22500 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ARUE_c22500 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ARUE_c22510 PF00342 Phosphoglucose isomerase ARUE_c22520 PF00923 Transaldolase ARUE_c22530 PF00456 Transketolase, thiamine diphosphate binding domain ARUE_c22530 PF02779 Transketolase, pyrimidine binding domain ARUE_c22530 PF02780 Transketolase, C-terminal domain ARUE_c22540 PF01040 UbiA prenyltransferase family ARUE_c22560 PF02628 ARUE_c22560 ARUE_c22570 PF01061 ARUE_c22570 ARUE_c22580 PF00005 ABC transporter ARUE_c22590 PF12840 Helix-turn-helix domain ARUE_c22600 PF01458 Uncharacterized protein family (UPF0051) ARUE_c22610 PF01458 Uncharacterized protein family (UPF0051) ARUE_c22620 PF00355 Rieske [2Fe-2S] domain ARUE_c22630 PF00005 ABC transporter ARUE_c22640 PF01883 Domain of unknown function DUF59 ARUE_c22650 PF04228 ARUE_c22650 ARUE_c22660 PF00501 AMP-binding enzyme ARUE_c22660 PF13193 AMP-binding enzyme C-terminal domain ARUE_c22670 PF00108 Thiolase, N-terminal domain ARUE_c22670 PF02803 Thiolase, C-terminal domain ARUE_c22680 PF02361 Cobalt transport protein ARUE_c22690 PF00005 ABC transporter ARUE_c22700 PF02632 BioY family ARUE_c22710 PF00005 ABC transporter ARUE_c22710 PF12848 ABC transporter ARUE_c22720 PF04073 Aminoacyl-tRNA editing domain ARUE_c22730 PF02104 ARUE_c22730 ARUE_c22750 PF11298 ARUE_c22750 ARUE_c22760 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c22770 PF00106 short chain dehydrogenase ARUE_c22780 PF00005 ABC transporter ARUE_c22800 PF12710 haloacid dehalogenase-like hydrolase ARUE_c22810 PF00005 ABC transporter ARUE_c22820 PF01925 ARUE_c22820 ARUE_c22830 PF00588 SpoU rRNA Methylase family ARUE_c22840 PF01197 Ribosomal protein L31 ARUE_c22850 PF03099 Biotin/lipoate A/B protein ligase family ARUE_c22860 PF01433 Peptidase family M1 ARUE_c22860 PF11838 ERAP1-like C-terminal domain ARUE_c22870 PF03601 ARUE_c22870 ARUE_c22880 PF14403 ARUE_c22880 ARUE_c22890 PF04168 ARUE_c22890 ARUE_c22900 PF01841 Transglutaminase-like superfamily ARUE_c22900 PF08379 ARUE_c22900 ARUE_c22910 PF00106 short chain dehydrogenase ARUE_c22920 PF00483 Nucleotidyl transferase ARUE_c22930 PF00534 Glycosyl transferases group 1 ARUE_c22930 PF13439 Glycosyltransferase Family 4 ARUE_c22940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c22940 PF01756 Acyl-CoA oxidase ARUE_c22940 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c22940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c22950 PF00440 Bacterial regulatory proteins, tetR family ARUE_c22960 PF00108 Thiolase, N-terminal domain ARUE_c22960 PF02803 Thiolase, C-terminal domain ARUE_c22970 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c22980 PF01575 MaoC like domain ARUE_c23000 PF01546 Peptidase family M20/M25/M40 ARUE_c23000 PF07687 Peptidase dimerisation domain ARUE_c23010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c23010 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c23040 PF02397 ARUE_c23040 ARUE_c23040 PF13727 CoA-binding domain ARUE_c23050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c23060 PF01370 NAD dependent epimerase/dehydratase family ARUE_c23070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ARUE_c23080 PF00132 Bacterial transferase hexapeptide (six repeats) ARUE_c23090 PF13692 Glycosyl transferases group 1 ARUE_c23100 PF00535 Glycosyl transferase family 2 ARUE_c23100 PF13440 ARUE_c23100 ARUE_c23130 PF04932 ARUE_c23130 ARUE_c23150 PF00534 Glycosyl transferases group 1 ARUE_c23170 PF00535 Glycosyl transferase family 2 ARUE_c23180 PF00535 Glycosyl transferase family 2 ARUE_c23180 PF03808 ARUE_c23180 ARUE_c23190 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ARUE_c23190 PF04321 RmlD substrate binding domain ARUE_c23200 PF16363 ARUE_c23200 ARUE_c23210 PF00483 Nucleotidyl transferase ARUE_c23220 PF00248 Aldo/keto reductase family ARUE_c23230 PF02673 ARUE_c23230 ARUE_c23240 PF01406 tRNA synthetases class I (C) catalytic domain ARUE_c23250 PF09754 PAC2 family ARUE_c23260 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c23280 PF08704 tRNA methyltransferase complex GCD14 subunit ARUE_c23280 PF14801 tRNA methyltransferase complex GCD14 subunit N-term ARUE_c23290 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c23290 PF16450 ARUE_c23290 ARUE_c23300 PF03136 Pup-ligase protein ARUE_c23320 PF00227 Proteasome subunit ARUE_c23330 PF00227 Proteasome subunit ARUE_c23340 PF03136 Pup-ligase protein ARUE_c23350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ARUE_c23360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ARUE_c23370 PF13280 ARUE_c23370 ARUE_c23390 PF02416 mttA/Hcf106 family ARUE_c23400 PF00902 Sec-independent protein translocase protein (TatC) ARUE_c23410 PF00270 DEAD/DEAH box helicase ARUE_c23410 PF08148 DSHCT (NUC185) domain ARUE_c23410 PF13234 rRNA-processing arch domain ARUE_c23420 PF07969 Amidohydrolase family ARUE_c23430 PF00535 Glycosyl transferase family 2 ARUE_c23440 PF13397 Domain of unknown function (DUF4109) ARUE_c23450 PF01145 SPFH domain / Band 7 family ARUE_c23460 PF01957 NfeD-like C-terminal, partner-binding ARUE_c23470 PF13649 Methyltransferase domain ARUE_c23480 PF00326 Prolyl oligopeptidase family ARUE_c23480 PF07676 WD40-like Beta Propeller Repeat ARUE_c23490 PF01327 Polypeptide deformylase ARUE_c23500 PF12680 SnoaL-like domain ARUE_c23510 PF01494 FAD binding domain ARUE_c23520 PF13649 Methyltransferase domain ARUE_c23530 PF00195 Chalcone and stilbene synthases, N-terminal domain ARUE_c23530 PF02797 Chalcone and stilbene synthases, C-terminal domain ARUE_c23540 PF00005 ABC transporter ARUE_c23560 PF06983 3-demethylubiquinone-9 3-methyltransferase ARUE_c23570 PF06983 3-demethylubiquinone-9 3-methyltransferase ARUE_c23590 PF11255 ARUE_c23590 ARUE_c23600 PF01037 AsnC family ARUE_c23610 PF00591 Glycosyl transferase family, a/b domain ARUE_c23610 PF02885 Glycosyl transferase family, helical bundle domain ARUE_c23620 PF00510 Cytochrome c oxidase subunit III ARUE_c23630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ARUE_c23640 PF00355 Rieske [2Fe-2S] domain ARUE_c23650 PF13631 Cytochrome b(N-terminal)/b6/petB ARUE_c23660 PF00392 Bacterial regulatory proteins, gntR family ARUE_c23660 PF07702 UTRA domain ARUE_c23670 PF00381 PTS HPr component phosphorylation site ARUE_c23680 PF12270 ARUE_c23680 ARUE_c23690 PF00115 Cytochrome C and Quinol oxidase polypeptide I ARUE_c23700 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ARUE_c23710 PF01521 Iron-sulphur cluster biosynthesis ARUE_c23720 PF01546 Peptidase family M20/M25/M40 ARUE_c23720 PF07687 Peptidase dimerisation domain ARUE_c23730 PF11241 ARUE_c23730 ARUE_c23740 PF01180 Dihydroorotate dehydrogenase ARUE_c23750 PF00890 FAD binding domain ARUE_c23760 PF12146 Putative lysophospholipase ARUE_c23770 PF12146 Putative lysophospholipase ARUE_c23780 PF01255 Putative undecaprenyl diphosphate synthase ARUE_c23790 PF02565 Recombination protein O C terminal ARUE_c23790 PF11967 Recombination protein O N terminal ARUE_c23800 PF00682 HMGL-like ARUE_c23800 PF08502 LeuA allosteric (dimerisation) domain ARUE_c23810 PF01431 Peptidase family M13 ARUE_c23810 PF05649 Peptidase family M13 ARUE_c23820 PF03816 Cell envelope-related transcriptional attenuator domain ARUE_c23820 PF13399 LytR cell envelope-related transcriptional attenuator ARUE_c23830 PF01926 50S ribosome-binding GTPase ARUE_c23830 PF07650 KH domain ARUE_c23840 PF00571 CBS domain ARUE_c23840 PF01595 ARUE_c23840 ARUE_c23840 PF03471 Transporter associated domain ARUE_c23850 PF02130 Uncharacterized protein family UPF0054 ARUE_c23860 PF02562 PhoH-like protein ARUE_c23870 PF10646 ARUE_c23870 ARUE_c23880 PF04452 RNA methyltransferase ARUE_c23890 PF00226 DnaJ domain ARUE_c23890 PF00684 DnaJ central domain ARUE_c23890 PF01556 DnaJ C terminal domain ARUE_c23900 PF01628 HrcA protein C terminal domain ARUE_c23900 PF08220 DeoR-like helix-turn-helix domain ARUE_c23910 PF11296 ARUE_c23910 ARUE_c23920 PF09685 ARUE_c23920 ARUE_c23930 PF04055 Radical SAM superfamily ARUE_c23940 PF00009 Elongation factor Tu GTP binding domain ARUE_c23940 PF00679 Elongation factor G C-terminus ARUE_c23940 PF06421 GTP-binding protein LepA C-terminus ARUE_c23950 PF02452 PemK-like protein ARUE_c23960 PF01649 Ribosomal protein S20 ARUE_c23970 PF06144 DNA polymerase III, delta subunit ARUE_c23980 PF03772 ARUE_c23980 ARUE_c23990 PF10531 SLBB domain ARUE_c23990 PF12836 Helix-hairpin-helix motif ARUE_c24000 PF02645 Uncharacterised protein, DegV family COG1307 ARUE_c24010 PF00133 tRNA synthetases class I (I, L, M and V) ARUE_c24010 PF08264 Anticodon-binding domain of tRNA ARUE_c24010 PF09334 tRNA synthetases class I (M) ARUE_c24010 PF13603 Leucyl-tRNA synthetase, Domain 2 ARUE_c24020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ARUE_c24020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ARUE_c24030 PF00230 Major intrinsic protein ARUE_c24040 PF01266 FAD dependent oxidoreductase ARUE_c24040 PF16901 ARUE_c24040 ARUE_c24050 PF04198 Putative sugar-binding domain ARUE_c24060 PF00248 Aldo/keto reductase family ARUE_c24070 PF12697 Alpha/beta hydrolase family ARUE_c24080 PF00534 Glycosyl transferases group 1 ARUE_c24090 PF07690 Major Facilitator Superfamily ARUE_c24100 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_c24100 PF00970 Oxidoreductase FAD-binding domain ARUE_c24110 PF00355 Rieske [2Fe-2S] domain ARUE_c24120 PF03551 Transcriptional regulator PadR-like family ARUE_c24140 PF00438 S-adenosylmethionine synthetase, N-terminal domain ARUE_c24140 PF02772 S-adenosylmethionine synthetase, central domain ARUE_c24140 PF02773 S-adenosylmethionine synthetase, C-terminal domain ARUE_c24150 PF02441 Flavoprotein ARUE_c24150 PF04127 DNA / pantothenate metabolism flavoprotein ARUE_c24160 PF01192 RNA polymerase Rpb6 ARUE_c24170 PF00625 Guanylate kinase ARUE_c24190 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ARUE_c24200 PF02142 MGS-like domain ARUE_c24200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ARUE_c24200 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ARUE_c24210 PF00117 Glutamine amidotransferase class-I ARUE_c24210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ARUE_c24230 PF01979 Amidohydrolase family ARUE_c24240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ARUE_c24240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ARUE_c24250 PF00156 Phosphoribosyl transferase domain ARUE_c24260 PF13367 ARUE_c24260 ARUE_c24270 PF01029 NusB family ARUE_c24280 PF01132 Elongation factor P (EF-P) OB domain ARUE_c24280 PF08207 Elongation factor P (EF-P) KOW-like domain ARUE_c24280 PF09285 Elongation factor P, C-terminal ARUE_c24300 PF01761 3-dehydroquinate synthase ARUE_c24310 PF01202 Shikimate kinase ARUE_c24320 PF01264 Chorismate synthase ARUE_c24330 PF08501 Shikimate dehydrogenase substrate binding domain ARUE_c24340 PF02618 YceG-like family ARUE_c24350 PF03652 Uncharacterised protein family (UPF0081) ARUE_c24360 PF01411 tRNA synthetases class II (A) ARUE_c24360 PF02272 DHHA1 domain ARUE_c24360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ARUE_c24380 PF06103 ARUE_c24380 ARUE_c24390 PF00163 Ribosomal protein S4/S9 N-terminal domain ARUE_c24390 PF01479 S4 domain ARUE_c24400 PF05496 Holliday junction DNA helicase ruvB N-terminus ARUE_c24400 PF12002 MgsA AAA+ ATPase C terminal ARUE_c24400 PF16193 ARUE_c24400 ARUE_c24420 PF00583 Acetyltransferase (GNAT) family ARUE_c24430 PF00152 tRNA synthetases class II (D, K and N) ARUE_c24430 PF01336 OB-fold nucleic acid binding domain ARUE_c24430 PF02938 GAD domain ARUE_c24440 PF03129 Anticodon binding domain ARUE_c24440 PF13393 Histidyl-tRNA synthetase ARUE_c24450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ARUE_c24460 PF03993 ARUE_c24460 ARUE_c24470 PF09407 Protein of unknown function (DUF2005) ARUE_c24480 PF02824 TGS domain ARUE_c24480 PF04607 Region found in RelA / SpoT proteins ARUE_c24480 PF13291 ACT domain ARUE_c24480 PF13328 HD domain ARUE_c24490 PF02355 Protein export membrane protein ARUE_c24490 PF07549 SecD/SecF GG Motif ARUE_c24500 PF02355 Protein export membrane protein ARUE_c24510 PF02699 Preprotein translocase subunit ARUE_c24520 PF05491 Holliday junction DNA helicase ruvB C-terminus ARUE_c24520 PF05496 Holliday junction DNA helicase ruvB N-terminus ARUE_c24530 PF01330 RuvA N terminal domain ARUE_c24530 PF07499 RuvA, C-terminal domain ARUE_c24530 PF14520 Helix-hairpin-helix domain ARUE_c24540 PF02075 Crossover junction endodeoxyribonuclease RuvC ARUE_c24550 PF01709 Transcriptional regulator ARUE_c24560 PF01174 SNO glutamine amidotransferase family ARUE_c24570 PF08245 Mur ligase middle domain ARUE_c24570 PF08353 ARUE_c24570 ARUE_c24580 PF07685 CobB/CobQ-like glutamine amidotransferase domain ARUE_c24590 PF09587 Bacterial capsule synthesis protein PGA_cap ARUE_c24600 PF01432 Peptidase family M3 ARUE_c24610 PF01680 SOR/SNZ family ARUE_c24620 PF01066 CDP-alcohol phosphatidyltransferase ARUE_c24630 PF01230 HIT domain ARUE_c24640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ARUE_c24640 PF03129 Anticodon binding domain ARUE_c24640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ARUE_c24650 PF02811 PHP domain ARUE_c24650 PF07733 Bacterial DNA polymerase III alpha subunit ARUE_c24650 PF14579 Helix-hairpin-helix motif ARUE_c24670 PF01494 FAD binding domain ARUE_c24670 PF13450 NAD(P)-binding Rossmann-like domain ARUE_c24680 PF00440 Bacterial regulatory proteins, tetR family ARUE_c24700 PF02586 Uncharacterised ACR, COG2135 ARUE_c24710 PF00462 Glutaredoxin ARUE_c24720 PF00107 Zinc-binding dehydrogenase ARUE_c24720 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c24730 PF00753 Metallo-beta-lactamase superfamily ARUE_c24740 PF00384 Molybdopterin oxidoreductase ARUE_c24740 PF01568 Molydopterin dinucleotide binding domain ARUE_c24760 PF13622 Thioesterase-like superfamily ARUE_c24770 PF09335 ARUE_c24770 ARUE_c24790 PF00355 Rieske [2Fe-2S] domain ARUE_c24790 PF01266 FAD dependent oxidoreductase ARUE_c24800 PF08713 DNA alkylation repair enzyme ARUE_c24810 PF06250 ARUE_c24810 ARUE_c24820 PF01738 Dienelactone hydrolase family ARUE_c24830 PF00005 ABC transporter ARUE_c24840 PF01061 ARUE_c24840 ARUE_c24850 PF00698 Acyl transferase domain ARUE_c24860 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c24870 PF00550 Phosphopantetheine attachment site ARUE_c24880 PF07977 FabA-like domain ARUE_c24890 PF00583 Acetyltransferase (GNAT) family ARUE_c24900 PF01571 Aminomethyltransferase folate-binding domain ARUE_c24910 PF00109 Beta-ketoacyl synthase, N-terminal domain ARUE_c24910 PF02801 Beta-ketoacyl synthase, C-terminal domain ARUE_c24930 PF00268 Ribonucleotide reductase, small chain ARUE_c24940 PF00317 Ribonucleotide reductase, all-alpha domain ARUE_c24940 PF02867 Ribonucleotide reductase, barrel domain ARUE_c24940 PF08343 Ribonucleotide reductase N-terminal ARUE_c24950 PF07972 NrdI Flavodoxin like ARUE_c24960 PF00462 Glutaredoxin ARUE_c24970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c24970 PF03466 LysR substrate binding domain ARUE_c24980 PF09406 Protein of unknown function (DUF2004) ARUE_c25000 PF13519 von Willebrand factor type A domain ARUE_c25010 PF05762 VWA domain containing CoxE-like protein ARUE_c25030 PF01882 ARUE_c25030 ARUE_c25040 PF07726 ATPase family associated with various cellular activities (AAA) ARUE_c25050 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c25060 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c25070 PF01547 Bacterial extracellular solute-binding protein ARUE_c25080 PF00480 ROK family ARUE_c25080 PF13412 Winged helix-turn-helix DNA-binding ARUE_c25090 PF05175 Methyltransferase small domain ARUE_c25120 PF00440 Bacterial regulatory proteins, tetR family ARUE_c25140 PF02410 Oligomerisation domain ARUE_c25160 PF01467 Cytidylyltransferase ARUE_c25180 PF00171 Aldehyde dehydrogenase family ARUE_c25190 PF00696 Amino acid kinase family ARUE_c25190 PF01472 PUA domain ARUE_c25200 PF01018 GTP1/OBG ARUE_c25200 PF01926 50S ribosome-binding GTPase ARUE_c25200 PF09269 Domain of unknown function (DUF1967) ARUE_c25210 PF01016 Ribosomal L27 protein ARUE_c25220 PF00829 Ribosomal prokaryotic L21 protein ARUE_c25230 PF03070 TENA/THI-4/PQQC family ARUE_c25230 PF08543 Phosphomethylpyrimidine kinase ARUE_c25240 PF10150 Ribonuclease E/G family ARUE_c25250 PF07884 Vitamin K epoxide reductase family ARUE_c25260 PF00334 Nucleoside diphosphate kinase ARUE_c25270 PF14017 ARUE_c25270 ARUE_c25280 PF02875 Mur ligase family, glutamate ligase domain ARUE_c25280 PF08245 Mur ligase middle domain ARUE_c25290 PF00133 tRNA synthetases class I (I, L, M and V) ARUE_c25290 PF08264 Anticodon-binding domain of tRNA ARUE_c25300 PF03372 Endonuclease/Exonuclease/phosphatase family ARUE_c25310 PF00106 short chain dehydrogenase ARUE_c25320 PF00133 tRNA synthetases class I (I, L, M and V) ARUE_c25320 PF08264 Anticodon-binding domain of tRNA ARUE_c25330 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ARUE_c25330 PF06827 Zinc finger found in FPG and IleRS ARUE_c25330 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ARUE_c25340 PF01323 DSBA-like thioredoxin domain ARUE_c25350 PF06689 ClpX C4-type zinc finger ARUE_c25350 PF07724 AAA domain (Cdc48 subfamily) ARUE_c25350 PF10431 C-terminal, D2-small domain, of ClpB protein ARUE_c25360 PF00574 Clp protease ARUE_c25370 PF00574 Clp protease ARUE_c25390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ARUE_c25390 PF05697 Bacterial trigger factor protein (TF) ARUE_c25390 PF05698 Bacterial trigger factor protein (TF) C-terminus ARUE_c25420 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ARUE_c25420 PF06827 Zinc finger found in FPG and IleRS ARUE_c25420 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ARUE_c25430 PF02502 Ribose/Galactose Isomerase ARUE_c25440 PF01433 Peptidase family M1 ARUE_c25440 PF11838 ERAP1-like C-terminal domain ARUE_c25450 PF02566 OsmC-like protein ARUE_c25460 PF01370 NAD dependent epimerase/dehydratase family ARUE_c25470 PF00924 Mechanosensitive ion channel ARUE_c25480 PF01152 Bacterial-like globin ARUE_c25500 PF13622 Thioesterase-like superfamily ARUE_c25510 PF00005 ABC transporter ARUE_c25510 PF12848 ABC transporter ARUE_c25530 PF08327 Activator of Hsp90 ATPase homolog 1-like protein ARUE_c25550 PF00436 Single-strand binding protein family ARUE_c25560 PF00583 Acetyltransferase (GNAT) family ARUE_c25570 PF00557 Metallopeptidase family M24 ARUE_c25580 PF08713 DNA alkylation repair enzyme ARUE_c25600 PF00929 Exonuclease ARUE_c25620 PF01327 Polypeptide deformylase ARUE_c25640 PF07510 ARUE_c25640 ARUE_c25660 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ARUE_c25660 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ARUE_c25670 PF03883 ARUE_c25670 ARUE_c25680 PF02591 Putative zinc ribbon domain ARUE_c25690 PF01784 NIF3 (NGG1p interacting factor 3) ARUE_c25700 PF01625 Peptide methionine sulfoxide reductase ARUE_c25710 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c25720 PF00132 Bacterial transferase hexapeptide (six repeats) ARUE_c25730 PF00106 short chain dehydrogenase ARUE_c25740 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ARUE_c25740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c25750 PF00392 Bacterial regulatory proteins, gntR family ARUE_c25750 PF07729 FCD domain ARUE_c25760 PF00107 Zinc-binding dehydrogenase ARUE_c25760 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c25770 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c25780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c25780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ARUE_c25790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c25800 PF01757 ARUE_c25800 ARUE_c25810 PF00083 Sugar (and other) transporter ARUE_c25820 PF01614 Bacterial transcriptional regulator ARUE_c25820 PF09339 IclR helix-turn-helix domain ARUE_c25850 PF02146 Sir2 family ARUE_c25860 PF00578 AhpC/TSA family ARUE_c25870 PF11253 ARUE_c25870 ARUE_c25880 PF00456 Transketolase, thiamine diphosphate binding domain ARUE_c25890 PF13556 PucR C-terminal helix-turn-helix domain ARUE_c25900 PF00698 Acyl transferase domain ARUE_c25910 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ARUE_c25910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ARUE_c25920 PF00550 Phosphopantetheine attachment site ARUE_c25930 PF00109 Beta-ketoacyl synthase, N-terminal domain ARUE_c25930 PF02801 Beta-ketoacyl synthase, C-terminal domain ARUE_c25940 PF11343 ARUE_c25940 ARUE_c25950 PF00589 Phage integrase family ARUE_c25950 PF02899 Phage integrase, N-terminal SAM-like domain ARUE_c25960 PF02481 DNA recombination-mediator protein A ARUE_c25970 PF01078 Magnesium chelatase, subunit ChlI ARUE_c25970 PF13335 ARUE_c25970 ARUE_c25970 PF13541 Subunit ChlI of Mg-chelatase ARUE_c25980 PF02021 Uncharacterised protein family UPF0102 ARUE_c25990 PF10611 ARUE_c25990 ARUE_c26000 PF01351 Ribonuclease HII ARUE_c26010 PF00717 Peptidase S24-like ARUE_c26010 PF10502 Signal peptidase, peptidase S26 ARUE_c26020 PF00717 Peptidase S24-like ARUE_c26020 PF10502 Signal peptidase, peptidase S26 ARUE_c26030 PF01245 Ribosomal protein L19 ARUE_c26040 PF01746 tRNA (Guanine-1)-methyltransferase ARUE_c26050 PF01782 RimM N-terminal domain ARUE_c26060 PF13083 KH domain ARUE_c26070 PF00886 Ribosomal protein S16 ARUE_c26090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c26100 PF01979 Amidohydrolase family ARUE_c26110 PF01964 ThiC family ARUE_c26110 PF13667 ThiC-associated domain ARUE_c26120 PF12697 Alpha/beta hydrolase family ARUE_c26130 PF00448 SRP54-type protein, GTPase domain ARUE_c26130 PF02881 SRP54-type protein, helical bundle domain ARUE_c26130 PF02978 Signal peptide binding domain ARUE_c26140 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ARUE_c26140 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ARUE_c26150 PF00543 Nitrogen regulatory protein P-II ARUE_c26160 PF00909 Ammonium Transporter Family ARUE_c26170 PF07690 Major Facilitator Superfamily ARUE_c26180 PF00448 SRP54-type protein, GTPase domain ARUE_c26180 PF02881 SRP54-type protein, helical bundle domain ARUE_c26190 PF02463 RecF/RecN/SMC N terminal domain ARUE_c26190 PF06470 SMC proteins Flexible Hinge Domain ARUE_c26200 PF13205 Bacterial Ig-like domain ARUE_c26200 PF13313 ARUE_c26200 ARUE_c26210 PF07676 WD40-like Beta Propeller Repeat ARUE_c26220 PF07690 Major Facilitator Superfamily ARUE_c26240 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ARUE_c26240 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ARUE_c26250 PF00035 Double-stranded RNA binding motif ARUE_c26250 PF14622 Ribonuclease-III-like ARUE_c26260 PF01783 Ribosomal L32p protein family ARUE_c26270 PF02620 ARUE_c26270 ARUE_c26280 PF01467 Cytidylyltransferase ARUE_c26290 PF00155 Aminotransferase class I and II ARUE_c26300 PF01564 Spermine/spermidine synthase ARUE_c26310 PF03602 Conserved hypothetical protein 95 ARUE_c26320 PF00270 DEAD/DEAH box helicase ARUE_c26320 PF00271 Helicase conserved C-terminal domain ARUE_c26320 PF17191 ARUE_c26320 ARUE_c26330 PF02734 DAK2 domain ARUE_c26330 PF13684 Dihydroxyacetone kinase family ARUE_c26340 PF00586 AIR synthase related protein, N-terminal domain ARUE_c26350 PF12028 ARUE_c26350 ARUE_c26360 PF01820 D-ala D-ala ligase N-terminus ARUE_c26360 PF07478 D-ala D-ala ligase C-terminus ARUE_c26370 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ARUE_c26370 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ARUE_c26380 PF01553 Acyltransferase ARUE_c26390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ARUE_c26400 PF00694 Aconitase C-terminal domain ARUE_c26410 PF00330 Aconitase family (aconitate hydratase) ARUE_c26420 PF01614 Bacterial transcriptional regulator ARUE_c26420 PF09339 IclR helix-turn-helix domain ARUE_c26430 PF08002 Protein of unknown function (DUF1697) ARUE_c26440 PF01926 50S ribosome-binding GTPase ARUE_c26450 PF00350 Dynamin family ARUE_c26480 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c26490 PF00749 tRNA synthetases class I (E and Q), catalytic domain ARUE_c26500 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c26500 PF10370 Domain of unknown function (DUF2437) ARUE_c26510 PF00753 Metallo-beta-lactamase superfamily ARUE_c26520 PF01063 Aminotransferase class IV ARUE_c26530 PF00180 Isocitrate/isopropylmalate dehydrogenase ARUE_c26540 PF07730 Histidine kinase ARUE_c26550 PF00072 Response regulator receiver domain ARUE_c26550 PF00196 Bacterial regulatory proteins, luxR family ARUE_c26560 PF00005 ABC transporter ARUE_c26570 PF02687 ARUE_c26570 ARUE_c26570 PF12704 MacB-like periplasmic core domain ARUE_c26580 PF08264 Anticodon-binding domain of tRNA ARUE_c26580 PF09334 tRNA synthetases class I (M) ARUE_c26590 PF00005 ABC transporter ARUE_c26610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c26610 PF01842 ACT domain ARUE_c26610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c26620 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ARUE_c26620 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain ARUE_c26630 PF10369 Small subunit of acetolactate synthase ARUE_c26630 PF13710 ACT domain ARUE_c26640 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c26640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c26640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c26650 PF00920 Dehydratase family ARUE_c26660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c26660 PF03466 LysR substrate binding domain ARUE_c26680 PF07995 Glucose / Sorbosone dehydrogenase ARUE_c26710 PF01047 MarR family ARUE_c26720 PF00578 AhpC/TSA family ARUE_c26740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c26750 PF06039 ARUE_c26750 ARUE_c26760 PF00873 AcrB/AcrD/AcrF family ARUE_c26770 PF00296 Luciferase-like monooxygenase ARUE_c26780 PF12802 MarR family ARUE_c26790 PF01841 Transglutaminase-like superfamily ARUE_c26810 PF07920 Protein of unknown function (DUF1684) ARUE_c26820 PF02040 ARUE_c26820 ARUE_c26830 PF10517 ARUE_c26830 ARUE_c26840 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c26850 PF04138 ARUE_c26850 ARUE_c26860 PF00266 Aminotransferase class-V ARUE_c26870 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ARUE_c26870 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ARUE_c26880 PF00890 FAD binding domain ARUE_c26880 PF02910 Fumarate reductase flavoprotein C-term ARUE_c26890 PF02445 Quinolinate synthetase A protein ARUE_c26900 PF00293 NUDIX domain ARUE_c26910 PF01037 AsnC family ARUE_c26910 PF13412 Winged helix-turn-helix DNA-binding ARUE_c26920 PF00324 Amino acid permease ARUE_c26930 PF00676 Dehydrogenase E1 component ARUE_c26940 PF02779 Transketolase, pyrimidine binding domain ARUE_c26940 PF02780 Transketolase, C-terminal domain ARUE_c26950 PF00364 Biotin-requiring enzyme ARUE_c26960 PF00561 alpha/beta hydrolase fold ARUE_c26980 PF00156 Phosphoribosyl transferase domain ARUE_c26990 PF07690 Major Facilitator Superfamily ARUE_c27000 PF09339 IclR helix-turn-helix domain ARUE_c27010 PF10703 Molybdenum cofactor biosynthesis protein F ARUE_c27010 PF17409 ARUE_c27010 ARUE_c27020 PF13520 Amino acid permease ARUE_c27030 PF12833 Helix-turn-helix domain ARUE_c27030 PF14525 ARUE_c27030 ARUE_c27040 PF00884 Sulfatase ARUE_c27050 PF00005 ABC transporter ARUE_c27060 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c27070 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c27080 PF09084 NMT1/THI5 like ARUE_c27090 PF07969 Amidohydrolase family ARUE_c27100 PF00440 Bacterial regulatory proteins, tetR family ARUE_c27100 PF13977 Bacterial transcriptional repressor ARUE_c27110 PF07690 Major Facilitator Superfamily ARUE_c27120 PF13476 AAA domain ARUE_c27120 PF13558 Putative exonuclease SbcCD, C subunit ARUE_c27130 PF00149 Calcineurin-like phosphoesterase ARUE_c27130 PF12320 Type 5 capsule protein repressor C-terminal domain ARUE_c27140 PF00230 Major intrinsic protein ARUE_c27150 PF02656 ARUE_c27150 ARUE_c27160 PF02656 ARUE_c27160 ARUE_c27170 PF03747 ADP-ribosylglycohydrolase ARUE_c27180 PF14340 ARUE_c27180 ARUE_c27190 PF00533 BRCA1 C Terminus (BRCT) domain ARUE_c27190 PF00929 Exonuclease ARUE_c27210 PF00005 ABC transporter ARUE_c27220 PF00392 Bacterial regulatory proteins, gntR family ARUE_c27230 PF09335 ARUE_c27230 ARUE_c27240 PF01725 Ham1 family ARUE_c27250 PF01138 3' exoribonuclease family, domain 1 ARUE_c27250 PF03725 3' exoribonuclease family, domain 2 ARUE_c27260 PF12706 Beta-lactamase superfamily domain ARUE_c27270 PF01177 Asp/Glu/Hydantoin racemase ARUE_c27280 PF09438 ARUE_c27280 ARUE_c27290 PF02617 ATP-dependent Clp protease adaptor protein ClpS ARUE_c27300 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ARUE_c27310 PF00857 Isochorismatase family ARUE_c27320 PF04851 Type III restriction enzyme, res subunit ARUE_c27330 PF11238 ARUE_c27330 ARUE_c27340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ARUE_c27360 PF00005 ABC transporter ARUE_c27370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ARUE_c27380 PF00085 Thioredoxin ARUE_c27380 PF14561 Tetratricopeptide repeat ARUE_c27400 PF01594 ARUE_c27400 ARUE_c27430 PF01939 Protein of unknown function DUF91 ARUE_c27440 PF01979 Amidohydrolase family ARUE_c27450 PF00313 'Cold-shock' DNA-binding domain ARUE_c27460 PF09924 Uncharacterized conserved protein (DUF2156) ARUE_c27470 PF00756 Putative esterase ARUE_c27480 PF10739 ARUE_c27480 ARUE_c27490 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ARUE_c27500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ARUE_c27500 PF02874 ATP synthase alpha/beta family, beta-barrel domain ARUE_c27510 PF00231 ATP synthase ARUE_c27520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ARUE_c27520 PF00306 ATP synthase alpha/beta chain, C terminal domain ARUE_c27520 PF02874 ATP synthase alpha/beta family, beta-barrel domain ARUE_c27530 PF00213 ATP synthase delta (OSCP) subunit ARUE_c27540 PF00430 ATP synthase B/B' CF(0) ARUE_c27550 PF00137 ATP synthase subunit C ARUE_c27560 PF00119 ATP synthase A chain ARUE_c27590 PF00953 Glycosyl transferase family 4 ARUE_c27600 PF13641 Glycosyltransferase like family 2 ARUE_c27610 PF03808 ARUE_c27610 ARUE_c27620 PF01300 Telomere recombination ARUE_c27630 PF13847 Methyltransferase domain ARUE_c27640 PF00472 RF-1 domain ARUE_c27640 PF03462 PCRF domain ARUE_c27650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ARUE_c27650 PF07497 Rho termination factor, RNA-binding domain ARUE_c27650 PF07498 Rho termination factor, N-terminal domain ARUE_c27660 PF00288 GHMP kinases N terminal domain ARUE_c27660 PF08544 GHMP kinases C terminal ARUE_c27670 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c27680 PF00742 Homoserine dehydrogenase ARUE_c27680 PF01842 ACT domain ARUE_c27680 PF03447 Homoserine dehydrogenase, NAD binding domain ARUE_c27690 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ARUE_c27690 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ARUE_c27700 PF00750 tRNA synthetases class I (R) ARUE_c27700 PF03485 Arginyl tRNA synthetase N terminal domain ARUE_c27700 PF05746 DALR anticodon binding domain ARUE_c27720 PF02424 ApbE family ARUE_c27750 PF01447 Thermolysin metallopeptidase, catalytic domain ARUE_c27750 PF02868 Thermolysin metallopeptidase, alpha-helical domain ARUE_c27770 PF01965 DJ-1/PfpI family ARUE_c27770 PF12833 Helix-turn-helix domain ARUE_c27790 PF08279 HTH domain ARUE_c27790 PF13280 ARUE_c27790 ARUE_c27800 PF00270 DEAD/DEAH box helicase ARUE_c27800 PF00271 Helicase conserved C-terminal domain ARUE_c27800 PF04408 Helicase associated domain (HA2) ARUE_c27800 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ARUE_c27800 PF11898 ARUE_c27800 ARUE_c27810 PF01230 HIT domain ARUE_c27820 PF00107 Zinc-binding dehydrogenase ARUE_c27820 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c27830 PF00581 Rhodanese-like domain ARUE_c27840 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c27850 PF13483 Beta-lactamase superfamily domain ARUE_c27860 PF01475 Ferric uptake regulator family ARUE_c27870 PF00950 ARUE_c27870 ARUE_c27880 PF00005 ABC transporter ARUE_c27890 PF01297 Periplasmic solute binding protein family ARUE_c27900 PF00571 CBS domain ARUE_c27900 PF01595 ARUE_c27900 ARUE_c27910 PF00571 CBS domain ARUE_c27910 PF01595 ARUE_c27910 ARUE_c27910 PF03471 Transporter associated domain ARUE_c27920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ARUE_c27920 PF00676 Dehydrogenase E1 component ARUE_c27920 PF02779 Transketolase, pyrimidine binding domain ARUE_c27920 PF16078 ARUE_c27920 ARUE_c27920 PF16870 ARUE_c27920 ARUE_c27930 PF13472 GDSL-like Lipase/Acylhydrolase family ARUE_c27940 PF00144 Beta-lactamase ARUE_c27960 PF03551 Transcriptional regulator PadR-like family ARUE_c27970 PF13490 Putative zinc-finger ARUE_c27980 PF04542 Sigma-70 region 2 ARUE_c27980 PF08281 Sigma-70, region 4 ARUE_c27990 PF07681 ARUE_c27990 ARUE_c28000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ARUE_c28010 PF03193 Protein of unknown function, DUF258 ARUE_c28020 PF00459 Inositol monophosphatase family ARUE_c28030 PF00266 Aminotransferase class-V ARUE_c28040 PF08241 Methyltransferase domain ARUE_c28050 PF01325 Iron dependent repressor, N-terminal DNA binding domain ARUE_c28050 PF02742 Iron dependent repressor, metal binding and dimerisation domain ARUE_c28050 PF04023 FeoA domain ARUE_c28060 PF07690 Major Facilitator Superfamily ARUE_c28080 PF13180 PDZ domain ARUE_c28080 PF13365 Trypsin-like peptidase domain ARUE_c28090 PF01668 SmpB protein ARUE_c28100 PF01551 Peptidase family M23 ARUE_c28110 PF02687 ARUE_c28110 ARUE_c28120 PF00005 ABC transporter ARUE_c28130 PF00472 RF-1 domain ARUE_c28130 PF03462 PCRF domain ARUE_c28160 PF07811 ARUE_c28160 ARUE_c28180 PF00482 Type II secretion system (T2SS), protein F ARUE_c28190 PF00482 Type II secretion system (T2SS), protein F ARUE_c28200 PF00437 Type II/IV secretion system protein ARUE_c28210 PF01183 Glycosyl hydrolases family 25 ARUE_c28250 PF13290 ARUE_c28250 ARUE_c28250 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella ARUE_c28260 PF00535 Glycosyl transferase family 2 ARUE_c28270 PF03706 ARUE_c28270 ARUE_c28290 PF00005 ABC transporter ARUE_c28300 PF01061 ARUE_c28300 ARUE_c28310 PF13641 Glycosyltransferase like family 2 ARUE_c28320 PF03275 UDP-galactopyranose mutase ARUE_c28320 PF13450 NAD(P)-binding Rossmann-like domain ARUE_c28330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c28330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c28340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ARUE_c28350 PF00132 Bacterial transferase hexapeptide (six repeats) ARUE_c28360 PF01580 FtsK/SpoIIIE family ARUE_c28360 PF16697 ARUE_c28360 ARUE_c28380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c28380 PF07568 ARUE_c28380 ARUE_c28380 PF08448 PAS fold ARUE_c28380 PF12282 Signal transduction histidine kinase ARUE_c28390 PF05088 ARUE_c28390 ARUE_c28400 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ARUE_c28410 PF13144 SAF-like ARUE_c28420 PF12728 Helix-turn-helix domain ARUE_c28440 PF01476 LysM domain ARUE_c28450 PF01043 SecA preprotein cross-linking domain ARUE_c28450 PF07516 SecA Wing and Scaffold domain ARUE_c28450 PF07517 SecA DEAD-like domain ARUE_c28460 PF06224 ARUE_c28460 ARUE_c28470 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ARUE_c28470 PF16321 ARUE_c28470 ARUE_c28480 PF00156 Phosphoribosyl transferase domain ARUE_c28490 PF10646 ARUE_c28490 ARUE_c28490 PF10647 ARUE_c28490 ARUE_c28500 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c28500 PF00672 HAMP domain ARUE_c28500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c28510 PF00072 Response regulator receiver domain ARUE_c28510 PF00486 Transcriptional regulatory protein, C terminal ARUE_c28530 PF13559 ARUE_c28530 ARUE_c28540 PF14258 ARUE_c28540 ARUE_c28550 PF07726 ATPase family associated with various cellular activities (AAA) ARUE_c28560 PF01882 ARUE_c28560 ARUE_c28570 PF13761 ARUE_c28570 ARUE_c28590 PF01817 Chorismate mutase type II ARUE_c28600 PF00005 ABC transporter ARUE_c28600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c28610 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c28620 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c28630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c28640 PF03054 tRNA methyl transferase ARUE_c28650 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c28650 PF14759 Reductase C-terminal ARUE_c28660 PF00266 Aminotransferase class-V ARUE_c28670 PF12840 Helix-turn-helix domain ARUE_c28690 PF00781 Diacylglycerol kinase catalytic domain ARUE_c28700 PF00226 DnaJ domain ARUE_c28710 PF00588 SpoU rRNA Methylase family ARUE_c28720 PF04542 Sigma-70 region 2 ARUE_c28720 PF08281 Sigma-70, region 4 ARUE_c28730 PF10099 ARUE_c28730 ARUE_c28740 PF02447 ARUE_c28740 ARUE_c28750 PF01202 Shikimate kinase ARUE_c28760 PF02585 GlcNAc-PI de-N-acetylase ARUE_c28770 PF00766 Electron transfer flavoprotein FAD-binding domain ARUE_c28770 PF01012 Electron transfer flavoprotein domain ARUE_c28780 PF01012 Electron transfer flavoprotein domain ARUE_c28790 PF13180 PDZ domain ARUE_c28790 PF13365 Trypsin-like peptidase domain ARUE_c28800 PF04536 TLP18 ARUE_c28810 PF04012 ARUE_c28810 ARUE_c28820 PF00392 Bacterial regulatory proteins, gntR family ARUE_c28820 PF07702 UTRA domain ARUE_c28850 PF03699 ARUE_c28850 ARUE_c28860 PF05362 Lon protease (S16) C-terminal proteolytic domain ARUE_c28870 PF10103 Uncharacterised conserved protein (DUF2342) ARUE_c28880 PF01863 Protein of unknown function DUF45 ARUE_c28890 PF00570 HRDC domain ARUE_c28890 PF13245 Part of AAA domain ARUE_c28890 PF13361 UvrD-like helicase C-terminal domain ARUE_c28900 PF00293 NUDIX domain ARUE_c28900 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ARUE_c28900 PF09297 NADH pyrophosphatase zinc ribbon domain ARUE_c28910 PF01636 Phosphotransferase enzyme family ARUE_c28920 PF00580 UvrD/REP helicase N-terminal domain ARUE_c28920 PF12705 PD-(D/E)XK nuclease superfamily ARUE_c28920 PF13361 UvrD-like helicase C-terminal domain ARUE_c28930 PF12705 PD-(D/E)XK nuclease superfamily ARUE_c28930 PF13245 Part of AAA domain ARUE_c28930 PF13361 UvrD-like helicase C-terminal domain ARUE_c28940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ARUE_c28950 PF00929 Exonuclease ARUE_c28960 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c28970 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c28980 PF00005 ABC transporter ARUE_c28990 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c29000 PF00202 Aminotransferase class-III ARUE_c29010 PF00296 Luciferase-like monooxygenase ARUE_c29020 PF00490 Delta-aminolevulinic acid dehydratase ARUE_c29030 PF02602 Uroporphyrinogen-III synthase HemD ARUE_c29040 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ARUE_c29040 PF03900 Porphobilinogen deaminase, C-terminal domain ARUE_c29050 PF00762 Ferrochelatase ARUE_c29060 PF06778 Chlorite dismutase ARUE_c29070 PF01593 Flavin containing amine oxidoreductase ARUE_c29080 PF01208 Uroporphyrinogen decarboxylase (URO-D) ARUE_c29090 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ARUE_c29090 PF01488 Shikimate / quinate 5-dehydrogenase ARUE_c29090 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ARUE_c29100 PF00581 Rhodanese-like domain ARUE_c29100 PF00899 ThiF family ARUE_c29110 PF00440 Bacterial regulatory proteins, tetR family ARUE_c29120 PF11305 ARUE_c29120 ARUE_c29140 PF01329 Pterin 4 alpha carbinolamine dehydratase ARUE_c29150 PF05690 Thiazole biosynthesis protein ThiG ARUE_c29160 PF02597 ThiS family ARUE_c29170 PF01266 FAD dependent oxidoreductase ARUE_c29180 PF02581 Thiamine monophosphate synthase/TENI ARUE_c29190 PF13794 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like ARUE_c29200 PF05154 ARUE_c29200 ARUE_c29210 PF00773 RNB domain ARUE_c29220 PF00270 DEAD/DEAH box helicase ARUE_c29220 PF00271 Helicase conserved C-terminal domain ARUE_c29230 PF01555 DNA methylase ARUE_c29240 PF01914 ARUE_c29240 ARUE_c29260 PF00557 Metallopeptidase family M24 ARUE_c29260 PF05195 Aminopeptidase P, N-terminal domain ARUE_c29280 PF00571 CBS domain ARUE_c29280 PF03448 MgtE intracellular N domain ARUE_c29280 PF05239 PRC-barrel domain ARUE_c29290 PF06210 ARUE_c29290 ARUE_c29300 PF01883 Domain of unknown function DUF59 ARUE_c29300 PF10609 ParA/MinD ATPase like ARUE_c29330 PF04542 Sigma-70 region 2 ARUE_c29330 PF08281 Sigma-70, region 4 ARUE_c29340 PF01596 O-methyltransferase ARUE_c29370 PF03641 Possible lysine decarboxylase ARUE_c29380 PF00005 ABC transporter ARUE_c29390 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c29400 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c29410 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c29420 PF01546 Peptidase family M20/M25/M40 ARUE_c29420 PF07687 Peptidase dimerisation domain ARUE_c29430 PF14602 Hexapeptide repeat of succinyl-transferase ARUE_c29430 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ARUE_c29460 PF00440 Bacterial regulatory proteins, tetR family ARUE_c29460 PF13977 Bacterial transcriptional repressor ARUE_c29470 PF01370 NAD dependent epimerase/dehydratase family ARUE_c29480 PF00285 Citrate synthase ARUE_c29490 PF00155 Aminotransferase class I and II ARUE_c29520 PF00009 Elongation factor Tu GTP binding domain ARUE_c29520 PF00679 Elongation factor G C-terminus ARUE_c29520 PF03144 Elongation factor Tu domain 2 ARUE_c29530 PF13472 GDSL-like Lipase/Acylhydrolase family ARUE_c29540 PF00005 ABC transporter ARUE_c29540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c29550 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c29550 PF12911 ARUE_c29550 ARUE_c29560 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c29580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c29600 PF01926 50S ribosome-binding GTPase ARUE_c29600 PF06071 Protein of unknown function (DUF933) ARUE_c29610 PF02646 ARUE_c29610 ARUE_c29620 PF02401 LytB protein ARUE_c29640 PF02601 ARUE_c29640 ARUE_c29640 PF13742 ARUE_c29640 ARUE_c29650 PF02609 Exonuclease VII small subunit ARUE_c29660 PF03976 Polyphosphate kinase 2 (PPK2) ARUE_c29670 PF00155 Aminotransferase class I and II ARUE_c29680 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ARUE_c29690 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c29700 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c29710 PF00005 ABC transporter ARUE_c29720 PF03193 Protein of unknown function, DUF258 ARUE_c29740 PF00293 NUDIX domain ARUE_c29750 PF01301 Glycosyl hydrolases family 35 ARUE_c29760 PF02678 Pirin ARUE_c29760 PF05726 Pirin C-terminal cupin domain ARUE_c29770 PF01869 BadF/BadG/BcrA/BcrD ATPase family ARUE_c29780 PF03060 Nitronate monooxygenase ARUE_c29790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c29790 PF03466 LysR substrate binding domain ARUE_c29800 PF07690 Major Facilitator Superfamily ARUE_c29810 PF06736 ARUE_c29810 ARUE_c29820 PF01037 AsnC family ARUE_c29820 PF13412 Winged helix-turn-helix DNA-binding ARUE_c29830 PF07690 Major Facilitator Superfamily ARUE_c29840 PF01037 AsnC family ARUE_c29840 PF13412 Winged helix-turn-helix DNA-binding ARUE_c29850 PF08570 ARUE_c29850 ARUE_c29860 PF01544 CorA-like Mg2+ transporter protein ARUE_c29870 PF03969 AFG1-like ATPase ARUE_c29880 PF00210 Ferritin-like domain ARUE_c29890 PF02537 ARUE_c29890 ARUE_c29900 PF02537 ARUE_c29900 ARUE_c29910 PF00582 Universal stress protein family ARUE_c29920 PF03109 ARUE_c29920 ARUE_c29930 PF03551 Transcriptional regulator PadR-like family ARUE_c29940 PF03551 Transcriptional regulator PadR-like family ARUE_c29960 PF12120 Rifampin ADP-ribosyl transferase ARUE_c29980 PF12389 ARUE_c29980 ARUE_c29990 PF00717 Peptidase S24-like ARUE_c30020 PF13460 NADH(P)-binding ARUE_c30040 PF13302 Acetyltransferase (GNAT) domain ARUE_c30050 PF00483 Nucleotidyl transferase ARUE_c30060 PF01812 5-formyltetrahydrofolate cyclo-ligase family ARUE_c30070 PF09723 ARUE_c30070 ARUE_c30080 PF08666 SAF domain ARUE_c30080 PF16976 ARUE_c30080 ARUE_c30100 PF00117 Glutamine amidotransferase class-I ARUE_c30100 PF00958 GMP synthase C terminal domain ARUE_c30100 PF02540 NAD synthase ARUE_c30110 PF12823 ARUE_c30110 ARUE_c30120 PF02104 ARUE_c30120 ARUE_c30130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ARUE_c30140 PF01266 FAD dependent oxidoreductase ARUE_c30140 PF16901 ARUE_c30140 ARUE_c30180 PF00478 IMP dehydrogenase / GMP reductase domain ARUE_c30190 PF00005 ABC transporter ARUE_c30200 PF00478 IMP dehydrogenase / GMP reductase domain ARUE_c30200 PF00571 CBS domain ARUE_c30210 PF01757 ARUE_c30210 ARUE_c30220 PF01757 ARUE_c30220 ARUE_c30230 PF13738 Pyridine nucleotide-disulphide oxidoreductase ARUE_c30250 PF00196 Bacterial regulatory proteins, luxR family ARUE_c30260 PF00118 TCP-1/cpn60 chaperonin family ARUE_c30270 PF00166 Chaperonin 10 Kd subunit ARUE_c30300 PF08501 Shikimate dehydrogenase substrate binding domain ARUE_c30310 PF07683 Cobalamin synthesis protein cobW C-terminal domain ARUE_c30320 PF04107 Glutamate-cysteine ligase family 2(GCS2) ARUE_c30340 PF00814 Glycoprotease family ARUE_c30350 PF00583 Acetyltransferase (GNAT) family ARUE_c30360 PF00814 Glycoprotease family ARUE_c30370 PF02367 Uncharacterised P-loop hydrolase UPF0079 ARUE_c30380 PF00842 Alanine racemase, C-terminal domain ARUE_c30380 PF01168 Alanine racemase, N-terminal domain ARUE_c30390 PF00294 pfkB family carbohydrate kinase ARUE_c30400 PF02056 Family 4 glycosyl hydrolase ARUE_c30400 PF11975 Family 4 glycosyl hydrolase C-terminal domain ARUE_c30410 PF13420 Acetyltransferase (GNAT) domain ARUE_c30420 PF00534 Glycosyl transferases group 1 ARUE_c30420 PF13439 Glycosyltransferase Family 4 ARUE_c30430 PF01268 Formate--tetrahydrofolate ligase ARUE_c30440 PF01658 Myo-inositol-1-phosphate synthase ARUE_c30450 PF00248 Aldo/keto reductase family ARUE_c30460 PF00128 Alpha amylase, catalytic domain ARUE_c30460 PF11941 Domain of unknown function (DUF3459) ARUE_c30470 PF00128 Alpha amylase, catalytic domain ARUE_c30480 PF00128 Alpha amylase, catalytic domain ARUE_c30480 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ARUE_c30490 PF01256 Carbohydrate kinase ARUE_c30490 PF03853 YjeF-related protein N-terminus ARUE_c30500 PF01648 4'-phosphopantetheinyl transferase superfamily ARUE_c30510 PF01380 SIS domain ARUE_c30510 PF13522 Glutamine amidotransferase domain ARUE_c30520 PF00485 Phosphoribulokinase / Uridine kinase family ARUE_c30530 PF02557 D-alanyl-D-alanine carboxypeptidase ARUE_c30540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ARUE_c30540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ARUE_c30540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ARUE_c30540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ARUE_c30550 PF00380 Ribosomal protein S9/S16 ARUE_c30560 PF00572 Ribosomal protein L13 ARUE_c30570 PF01478 Type IV leader peptidase family ARUE_c30580 PF07811 ARUE_c30580 ARUE_c30590 PF13400 ARUE_c30590 ARUE_c30600 PF16976 ARUE_c30600 ARUE_c30610 PF13614 AAA domain ARUE_c30620 PF00437 Type II/IV secretion system protein ARUE_c30630 PF00482 Type II secretion system (T2SS), protein F ARUE_c30640 PF00482 Type II secretion system (T2SS), protein F ARUE_c30650 PF13365 Trypsin-like peptidase domain ARUE_c30660 PF01416 tRNA pseudouridine synthase ARUE_c30670 PF01196 Ribosomal protein L17 ARUE_c30680 PF01000 RNA polymerase Rpb3/RpoA insert domain ARUE_c30680 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ARUE_c30680 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ARUE_c30690 PF00411 Ribosomal protein S11 ARUE_c30700 PF00416 Ribosomal protein S13/S18 ARUE_c30710 PF01176 Translation initiation factor 1A / IF-1 ARUE_c30720 PF03576 Peptidase family S58 ARUE_c30730 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c30740 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c30750 PF13416 Bacterial extracellular solute-binding protein ARUE_c30760 PF00557 Metallopeptidase family M24 ARUE_c30770 PF00406 Adenylate kinase ARUE_c30780 PF00344 SecY translocase ARUE_c30790 PF00828 Ribosomal protein L18e/L15 ARUE_c30800 PF00327 Ribosomal protein L30p/L7e ARUE_c30810 PF00333 Ribosomal protein S5, N-terminal domain ARUE_c30810 PF03719 Ribosomal protein S5, C-terminal domain ARUE_c30820 PF00861 Ribosomal L18p/L5e family ARUE_c30830 PF00347 Ribosomal protein L6 ARUE_c30840 PF00410 Ribosomal protein S8 ARUE_c30850 PF00281 Ribosomal protein L5 ARUE_c30850 PF00673 ribosomal L5P family C-terminus ARUE_c30860 PF17136 ARUE_c30860 ARUE_c30870 PF00238 Ribosomal protein L14p/L23e ARUE_c30880 PF00366 Ribosomal protein S17 ARUE_c30890 PF00831 Ribosomal L29 protein ARUE_c30900 PF00252 Ribosomal protein L16p/L10e ARUE_c30910 PF00189 Ribosomal protein S3, C-terminal domain ARUE_c30910 PF07650 KH domain ARUE_c30920 PF00237 Ribosomal protein L22p/L17e ARUE_c30930 PF00203 Ribosomal protein S19 ARUE_c30940 PF00181 Ribosomal Proteins L2, RNA binding domain ARUE_c30940 PF03947 Ribosomal Proteins L2, C-terminal domain ARUE_c30950 PF00276 Ribosomal protein L23 ARUE_c30960 PF00573 Ribosomal protein L4/L1 family ARUE_c30970 PF00297 Ribosomal protein L3 ARUE_c30980 PF00338 Ribosomal protein S10p/S20e ARUE_c30990 PF00232 Glycosyl hydrolase family 1 ARUE_c31010 PF00009 Elongation factor Tu GTP binding domain ARUE_c31010 PF03143 Elongation factor Tu C-terminal domain ARUE_c31010 PF03144 Elongation factor Tu domain 2 ARUE_c31020 PF00009 Elongation factor Tu GTP binding domain ARUE_c31020 PF00679 Elongation factor G C-terminus ARUE_c31020 PF03144 Elongation factor Tu domain 2 ARUE_c31020 PF03764 Elongation factor G, domain IV ARUE_c31020 PF14492 Elongation Factor G, domain II ARUE_c31030 PF00177 Ribosomal protein S7p/S5e ARUE_c31040 PF00164 Ribosomal protein S12/S23 ARUE_c31050 PF00623 RNA polymerase Rpb1, domain 2 ARUE_c31050 PF04983 RNA polymerase Rpb1, domain 3 ARUE_c31050 PF04997 RNA polymerase Rpb1, domain 1 ARUE_c31050 PF04998 RNA polymerase Rpb1, domain 5 ARUE_c31050 PF05000 RNA polymerase Rpb1, domain 4 ARUE_c31060 PF00562 RNA polymerase Rpb2, domain 6 ARUE_c31060 PF04560 RNA polymerase Rpb2, domain 7 ARUE_c31060 PF04561 RNA polymerase Rpb2, domain 2 ARUE_c31060 PF04563 RNA polymerase beta subunit ARUE_c31060 PF04565 RNA polymerase Rpb2, domain 3 ARUE_c31060 PF10385 RNA polymerase beta subunit external 1 domain ARUE_c31070 PF00108 Thiolase, N-terminal domain ARUE_c31070 PF02803 Thiolase, C-terminal domain ARUE_c31080 PF04073 Aminoacyl-tRNA editing domain ARUE_c31090 PF00542 Ribosomal protein L7/L12 C-terminal domain ARUE_c31090 PF16320 ARUE_c31090 ARUE_c31100 PF00466 Ribosomal protein L10 ARUE_c31110 PF00583 Acetyltransferase (GNAT) family ARUE_c31120 PF00583 Acetyltransferase (GNAT) family ARUE_c31130 PF00687 Ribosomal protein L1p/L10e family ARUE_c31140 PF00298 Ribosomal protein L11, RNA binding domain ARUE_c31140 PF03946 Ribosomal protein L11, N-terminal domain ARUE_c31150 PF02357 Transcription termination factor nusG ARUE_c31160 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ARUE_c31180 PF00155 Aminotransferase class I and II ARUE_c31190 PF00072 Response regulator receiver domain ARUE_c31190 PF00196 Bacterial regulatory proteins, luxR family ARUE_c31200 PF04024 ARUE_c31200 ARUE_c31200 PF13581 Histidine kinase-like ATPase domain ARUE_c31210 PF04024 ARUE_c31210 ARUE_c31230 PF04024 ARUE_c31230 ARUE_c31240 PF00365 Phosphofructokinase ARUE_c31250 PF00583 Acetyltransferase (GNAT) family ARUE_c31260 PF07690 Major Facilitator Superfamily ARUE_c31270 PF03551 Transcriptional regulator PadR-like family ARUE_c31280 PF12796 Ankyrin repeats (3 copies) ARUE_c31290 PF01571 Aminomethyltransferase folate-binding domain ARUE_c31290 PF08669 Glycine cleavage T-protein C-terminal barrel domain ARUE_c31300 PF03358 NADPH-dependent FMN reductase ARUE_c31310 PF08768 Domain of unknown function (DUF1794) ARUE_c31330 PF00486 Transcriptional regulatory protein, C terminal ARUE_c31340 PF00583 Acetyltransferase (GNAT) family ARUE_c31350 PF02503 Polyphosphate kinase middle domain ARUE_c31350 PF13089 Polyphosphate kinase N-terminal domain ARUE_c31350 PF13090 Polyphosphate kinase C-terminal domain ARUE_c31360 PF00293 NUDIX domain ARUE_c31360 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c31400 PF00303 Thymidylate synthase ARUE_c31410 PF00186 Dihydrofolate reductase ARUE_c31430 PF01118 Semialdehyde dehydrogenase, NAD binding domain ARUE_c31430 PF02774 Semialdehyde dehydrogenase, dimerisation domain ARUE_c31440 PF13338 ARUE_c31440 ARUE_c31450 PF06224 ARUE_c31450 ARUE_c31470 PF01565 FAD binding domain ARUE_c31470 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ARUE_c31480 PF07690 Major Facilitator Superfamily ARUE_c31490 PF01575 MaoC like domain ARUE_c31500 PF13452 N-terminal half of MaoC dehydratase ARUE_c31510 PF11384 ARUE_c31510 ARUE_c31520 PF10977 ARUE_c31520 ARUE_c31530 PF03328 HpcH/HpaI aldolase/citrate lyase family ARUE_c31540 PF09084 NMT1/THI5 like ARUE_c31550 PF00005 ABC transporter ARUE_c31560 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c31570 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ARUE_c31580 PF00248 Aldo/keto reductase family ARUE_c31590 PF00128 Alpha amylase, catalytic domain ARUE_c31600 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c31610 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c31620 PF13416 Bacterial extracellular solute-binding protein ARUE_c31630 PF00480 ROK family ARUE_c31630 PF09339 IclR helix-turn-helix domain ARUE_c31640 PF00999 Sodium/hydrogen exchanger family ARUE_c31650 PF13460 NADH(P)-binding ARUE_c31680 PF01476 LysM domain ARUE_c31690 PF00270 DEAD/DEAH box helicase ARUE_c31690 PF00271 Helicase conserved C-terminal domain ARUE_c31690 PF03880 DbpA RNA binding domain ARUE_c31710 PF03473 MOSC domain ARUE_c31720 PF00072 Response regulator receiver domain ARUE_c31720 PF00486 Transcriptional regulatory protein, C terminal ARUE_c31730 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c31730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c31730 PF13493 Domain of unknown function (DUF4118) ARUE_c31750 PF03738 Glutathionylspermidine synthase preATP-grasp ARUE_c31760 PF13520 Amino acid permease ARUE_c31770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c31770 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c31770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c31780 PF00440 Bacterial regulatory proteins, tetR family ARUE_c31780 PF13977 Bacterial transcriptional repressor ARUE_c31790 PF01547 Bacterial extracellular solute-binding protein ARUE_c31800 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c31810 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c31820 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ARUE_c31820 PF02837 Glycosyl hydrolases family 2, sugar binding domain ARUE_c31820 PF02929 Beta galactosidase small chain ARUE_c31820 PF16353 ARUE_c31820 ARUE_c31830 PF07690 Major Facilitator Superfamily ARUE_c31840 PF01638 HxlR-like helix-turn-helix ARUE_c31850 PF04185 Phosphoesterase family ARUE_c31850 PF05506 ARUE_c31850 ARUE_c31860 PF01053 Cys/Met metabolism PLP-dependent enzyme ARUE_c31870 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c31870 PF00571 CBS domain ARUE_c31880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c31900 PF00005 ABC transporter ARUE_c31910 PF01061 ARUE_c31910 ARUE_c31920 PF00501 AMP-binding enzyme ARUE_c31920 PF13193 AMP-binding enzyme C-terminal domain ARUE_c31930 PF03992 Antibiotic biosynthesis monooxygenase ARUE_c31940 PF00085 Thioredoxin ARUE_c31950 PF00440 Bacterial regulatory proteins, tetR family ARUE_c31960 PF00005 ABC transporter ARUE_c31970 PF12679 ARUE_c31970 ARUE_c31980 PF13279 Thioesterase-like superfamily ARUE_c32000 PF07885 Ion channel ARUE_c32030 PF04461 Protein of unknown function (DUF520) ARUE_c32040 PF01435 Peptidase family M48 ARUE_c32050 PF05977 Transmembrane secretion effector ARUE_c32070 PF01475 Ferric uptake regulator family ARUE_c32080 PF00199 Catalase ARUE_c32080 PF06628 Catalase-related immune-responsive ARUE_c32090 PF09365 ARUE_c32090 ARUE_c32100 PF13520 Amino acid permease ARUE_c32110 PF05610 ARUE_c32110 ARUE_c32120 PF00107 Zinc-binding dehydrogenase ARUE_c32120 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c32130 PF00171 Aldehyde dehydrogenase family ARUE_c32140 PF01590 GAF domain ARUE_c32150 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c32160 PF00892 EamA-like transporter family ARUE_c32170 PF02278 Polysaccharide lyase family 8, super-sandwich domain ARUE_c32170 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ARUE_c32170 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain ARUE_c32180 PF00202 Aminotransferase class-III ARUE_c32190 PF00171 Aldehyde dehydrogenase family ARUE_c32200 PF07905 ARUE_c32200 ARUE_c32200 PF13556 PucR C-terminal helix-turn-helix domain ARUE_c32210 PF07690 Major Facilitator Superfamily ARUE_c32220 PF00392 Bacterial regulatory proteins, gntR family ARUE_c32220 PF07729 FCD domain ARUE_c32230 PF00581 Rhodanese-like domain ARUE_c32240 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c32250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ARUE_c32250 PF13241 Putative NAD(P)-binding ARUE_c32260 PF08713 DNA alkylation repair enzyme ARUE_c32270 PF04960 Glutaminase ARUE_c32290 PF00296 Luciferase-like monooxygenase ARUE_c32300 PF01872 RibD C-terminal domain ARUE_c32320 PF03713 Domain of unknown function (DUF305) ARUE_c32340 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c32350 PF00005 ABC transporter ARUE_c32360 PF13379 NMT1-like family ARUE_c32370 PF02574 Homocysteine S-methyltransferase ARUE_c32380 PF00009 Elongation factor Tu GTP binding domain ARUE_c32390 PF01507 Phosphoadenosine phosphosulfate reductase family ARUE_c32400 PF01507 Phosphoadenosine phosphosulfate reductase family ARUE_c32410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ARUE_c32410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ARUE_c32440 PF13930 DNA/RNA non-specific endonuclease ARUE_c32490 PF01903 CbiX ARUE_c32500 PF03458 ARUE_c32500 ARUE_c32530 PF00348 Polyprenyl synthetase ARUE_c32540 PF01494 FAD binding domain ARUE_c32550 PF01209 ubiE/COQ5 methyltransferase family ARUE_c32560 PF00425 chorismate binding enzyme ARUE_c32570 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c32580 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c32590 PF00005 ABC transporter ARUE_c32600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c32610 PF04832 SOUL heme-binding protein ARUE_c32620 PF05787 Bacterial protein of unknown function (DUF839) ARUE_c32630 PF13378 Enolase C-terminal domain-like ARUE_c32650 PF10708 ARUE_c32650 ARUE_c32670 PF00356 Bacterial regulatory proteins, lacI family ARUE_c32670 PF13377 Periplasmic binding protein-like domain ARUE_c32680 PF00251 Glycosyl hydrolases family 32 N-terminal domain ARUE_c32690 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c32700 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c32710 PF13416 Bacterial extracellular solute-binding protein ARUE_c32720 PF01569 PAP2 superfamily ARUE_c32740 PF01757 ARUE_c32740 ARUE_c32750 PF00082 Subtilase family ARUE_c32750 PF00395 S-layer homology domain ARUE_c32760 PF07690 Major Facilitator Superfamily ARUE_c32790 PF00753 Metallo-beta-lactamase superfamily ARUE_c32800 PF04230 ARUE_c32800 ARUE_c32810 PF00395 S-layer homology domain ARUE_c32810 PF05345 Putative Ig domain ARUE_c32830 PF00395 S-layer homology domain ARUE_c32830 PF13620 Carboxypeptidase regulatory-like domain ARUE_c32840 PF01545 Cation efflux family ARUE_c32850 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c32860 PF00571 CBS domain ARUE_c32860 PF01595 ARUE_c32860 ARUE_c32860 PF03471 Transporter associated domain ARUE_c32870 PF00571 CBS domain ARUE_c32870 PF01595 ARUE_c32870 ARUE_c32880 PF00395 S-layer homology domain ARUE_c32880 PF00415 Regulator of chromosome condensation (RCC1) repeat ARUE_c32890 PF00082 Subtilase family ARUE_c32890 PF00395 S-layer homology domain ARUE_c32900 PF00395 S-layer homology domain ARUE_c32900 PF00415 Regulator of chromosome condensation (RCC1) repeat ARUE_c32900 PF13540 Regulator of chromosome condensation (RCC1) repeat ARUE_c32910 PF13783 ARUE_c32910 ARUE_c32920 PF07883 Cupin domain ARUE_c32930 PF09391 Protein of unknown function (DUF2000) ARUE_c32940 PF02311 AraC-like ligand binding domain ARUE_c32940 PF12833 Helix-turn-helix domain ARUE_c32960 PF01638 HxlR-like helix-turn-helix ARUE_c32980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ARUE_c32980 PF00364 Biotin-requiring enzyme ARUE_c32980 PF02817 e3 binding domain ARUE_c32990 PF02779 Transketolase, pyrimidine binding domain ARUE_c32990 PF02780 Transketolase, C-terminal domain ARUE_c33000 PF00676 Dehydrogenase E1 component ARUE_c33010 PF01037 AsnC family ARUE_c33010 PF13404 AsnC-type helix-turn-helix domain ARUE_c33020 PF02698 DUF218 domain ARUE_c33030 PF02350 UDP-N-acetylglucosamine 2-epimerase ARUE_c33040 PF04932 ARUE_c33040 ARUE_c33050 PF02706 Chain length determinant protein ARUE_c33050 PF10609 ParA/MinD ATPase like ARUE_c33060 PF04230 ARUE_c33060 ARUE_c33070 PF00881 Nitroreductase family ARUE_c33080 PF13440 ARUE_c33080 ARUE_c33080 PF14667 Polysaccharide biosynthesis C-terminal domain ARUE_c33090 PF00132 Bacterial transferase hexapeptide (six repeats) ARUE_c33100 PF13439 Glycosyltransferase Family 4 ARUE_c33100 PF13692 Glycosyl transferases group 1 ARUE_c33110 PF03808 ARUE_c33110 ARUE_c33120 PF16363 ARUE_c33120 ARUE_c33130 PF01370 NAD dependent epimerase/dehydratase family ARUE_c33140 PF02397 ARUE_c33140 ARUE_c33140 PF13727 CoA-binding domain ARUE_c33150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ARUE_c33150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ARUE_c33150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ARUE_c33160 PF13196 ARUE_c33160 ARUE_c33180 PF04892 ARUE_c33180 ARUE_c33220 PF01757 ARUE_c33220 ARUE_c33230 PF13472 GDSL-like Lipase/Acylhydrolase family ARUE_c33240 PF12697 Alpha/beta hydrolase family ARUE_c33250 PF12728 Helix-turn-helix domain ARUE_c33260 PF00487 ARUE_c33260 ARUE_c33270 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_c33270 PF00175 Oxidoreductase NAD-binding domain ARUE_c33280 PF00561 alpha/beta hydrolase fold ARUE_c33290 PF00395 S-layer homology domain ARUE_c33290 PF00415 Regulator of chromosome condensation (RCC1) repeat ARUE_c33290 PF05345 Putative Ig domain ARUE_c33370 PF08818 Domain of unknown function (DU1801) ARUE_c33380 PF03995 Peptidase inhibitor family I36 ARUE_c33390 PF13508 Acetyltransferase (GNAT) domain ARUE_c33400 PF07553 Host cell surface-exposed lipoprotein ARUE_c33410 PF07081 Protein of unknown function (DUF1349) ARUE_c33430 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella ARUE_c33440 PF01047 MarR family ARUE_c33450 PF02696 ARUE_c33450 ARUE_c33500 PF00395 S-layer homology domain ARUE_c33500 PF05901 ARUE_c33500 ARUE_c33500 PF07510 ARUE_c33500 ARUE_c33520 PF00395 S-layer homology domain ARUE_c33530 PF13360 PQQ-like domain ARUE_c33540 PF00395 S-layer homology domain ARUE_c33550 PF13632 Glycosyl transferase family group 2 ARUE_c33560 PF00704 Glycosyl hydrolases family 18 ARUE_c33580 PF13360 PQQ-like domain ARUE_c33590 PF00378 Enoyl-CoA hydratase/isomerase family ARUE_c33600 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_c33600 PF00175 Oxidoreductase NAD-binding domain ARUE_c33600 PF00970 Oxidoreductase FAD-binding domain ARUE_c33610 PF01883 Domain of unknown function DUF59 ARUE_c33620 PF05138 Phenylacetic acid catabolic protein ARUE_c33630 PF06243 Phenylacetic acid degradation B ARUE_c33640 PF05138 Phenylacetic acid catabolic protein ARUE_c33650 PF01451 Low molecular weight phosphotyrosine protein phosphatase ARUE_c33660 PF01476 LysM domain ARUE_c33670 PF03816 Cell envelope-related transcriptional attenuator domain ARUE_c33680 PF00717 Peptidase S24-like ARUE_c33700 PF04892 ARUE_c33700 ARUE_c33710 PF00072 Response regulator receiver domain ARUE_c33710 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c33710 PF01627 Hpt domain ARUE_c33710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c33710 PF13426 PAS domain ARUE_c33720 PF00072 Response regulator receiver domain ARUE_c33720 PF00990 GGDEF domain ARUE_c33730 PF00326 Prolyl oligopeptidase family ARUE_c33730 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ARUE_c33740 PF13847 Methyltransferase domain ARUE_c33750 PF11964 SpoIIAA-like ARUE_c33760 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c33760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c33780 PF00563 EAL domain ARUE_c33780 PF00990 GGDEF domain ARUE_c33790 PF13302 Acetyltransferase (GNAT) domain ARUE_c33800 PF03061 Thioesterase superfamily ARUE_c33810 PF00501 AMP-binding enzyme ARUE_c33810 PF14535 AMP-binding enzyme C-terminal domain ARUE_c33820 PF00440 Bacterial regulatory proteins, tetR family ARUE_c33830 PF00171 Aldehyde dehydrogenase family ARUE_c33830 PF01575 MaoC like domain ARUE_c33850 PF00395 S-layer homology domain ARUE_c33850 PF13620 Carboxypeptidase regulatory-like domain ARUE_c33860 PF00535 Glycosyl transferase family 2 ARUE_c33870 PF13350 Tyrosine phosphatase family ARUE_c33880 PF00356 Bacterial regulatory proteins, lacI family ARUE_c33880 PF13377 Periplasmic binding protein-like domain ARUE_c33890 PF13416 Bacterial extracellular solute-binding protein ARUE_c33900 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c33910 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c33920 PF06283 Trehalose utilisation ARUE_c33930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c33930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c33940 PF13472 GDSL-like Lipase/Acylhydrolase family ARUE_c33950 PF13302 Acetyltransferase (GNAT) domain ARUE_c33960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ARUE_c33960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ARUE_c33970 PF00378 Enoyl-CoA hydratase/isomerase family ARUE_c33980 PF00108 Thiolase, N-terminal domain ARUE_c33980 PF02803 Thiolase, C-terminal domain ARUE_c33990 PF13599 Pentapeptide repeats (9 copies) ARUE_c34000 PF10604 Polyketide cyclase / dehydrase and lipid transport ARUE_c34010 PF00324 Amino acid permease ARUE_c34020 PF00355 Rieske [2Fe-2S] domain ARUE_c34030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ARUE_c34030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ARUE_c34030 PF04324 BFD-like [2Fe-2S] binding domain ARUE_c34030 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c34050 PF00005 ABC transporter ARUE_c34070 PF13349 ARUE_c34070 ARUE_c34080 PF00950 ARUE_c34080 ARUE_c34090 PF00005 ABC transporter ARUE_c34100 PF01297 Periplasmic solute binding protein family ARUE_c34110 PF02517 CAAX protease self-immunity ARUE_c34130 PF00378 Enoyl-CoA hydratase/isomerase family ARUE_c34140 PF00501 AMP-binding enzyme ARUE_c34140 PF13193 AMP-binding enzyme C-terminal domain ARUE_c34150 PF01040 UbiA prenyltransferase family ARUE_c34160 PF14012 ARUE_c34160 ARUE_c34170 PF13396 ARUE_c34170 ARUE_c34190 PF00350 Dynamin family ARUE_c34200 PF00350 Dynamin family ARUE_c34230 PF00196 Bacterial regulatory proteins, luxR family ARUE_c34240 PF00012 Hsp70 protein ARUE_c34250 PF01578 ARUE_c34250 ARUE_c34260 PF05140 ARUE_c34260 ARUE_c34270 PF02683 ARUE_c34270 ARUE_c34280 PF00578 AhpC/TSA family ARUE_c34290 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c34300 PF04264 YceI-like domain ARUE_c34330 PF02629 CoA binding domain ARUE_c34330 PF06971 Putative DNA-binding protein N-terminus ARUE_c34340 PF05768 Glutaredoxin-like domain (DUF836) ARUE_c34350 PF12710 haloacid dehalogenase-like hydrolase ARUE_c34360 PF04480 Protein of unknown function (DUF559) ARUE_c34370 PF12728 Helix-turn-helix domain ARUE_c34380 PF00793 DAHP synthetase I family ARUE_c34390 PF05448 Acetyl xylan esterase (AXE1) ARUE_c34400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c34400 PF14100 ARUE_c34400 ARUE_c34410 PF05977 Transmembrane secretion effector ARUE_c34430 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c34440 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c34450 PF13416 Bacterial extracellular solute-binding protein ARUE_c34460 PF02449 Beta-galactosidase ARUE_c34460 PF08532 Beta-galactosidase trimerisation domain ARUE_c34460 PF08533 Beta-galactosidase C-terminal domain ARUE_c34470 PF13416 Bacterial extracellular solute-binding protein ARUE_c34480 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c34490 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c34500 PF05448 Acetyl xylan esterase (AXE1) ARUE_c34510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c34510 PF14100 ARUE_c34510 ARUE_c34520 PF00557 Metallopeptidase family M24 ARUE_c34530 PF00171 Aldehyde dehydrogenase family ARUE_c34540 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ARUE_c34540 PF13378 Enolase C-terminal domain-like ARUE_c34550 PF00701 Dihydrodipicolinate synthetase family ARUE_c34560 PF01370 NAD dependent epimerase/dehydratase family ARUE_c34570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c34570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c34580 PF00356 Bacterial regulatory proteins, lacI family ARUE_c34580 PF13377 Periplasmic binding protein-like domain ARUE_c34590 PF00392 Bacterial regulatory proteins, gntR family ARUE_c34590 PF07729 FCD domain ARUE_c34600 PF01070 FMN-dependent dehydrogenase ARUE_c34610 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ARUE_c34610 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ARUE_c34620 PF01022 Bacterial regulatory protein, arsR family ARUE_c34630 PF00850 Histone deacetylase domain ARUE_c34640 PF02386 Cation transport protein ARUE_c34650 PF02080 TrkA-C domain ARUE_c34650 PF02254 TrkA-N domain ARUE_c34660 PF03807 NADP oxidoreductase coenzyme F420-dependent ARUE_c34660 PF14748 Pyrroline-5-carboxylate reductase dimerisation ARUE_c34680 PF01261 Xylose isomerase-like TIM barrel ARUE_c34690 PF02541 Ppx/GppA phosphatase family ARUE_c34700 PF07179 ARUE_c34700 ARUE_c34710 PF01131 DNA topoisomerase ARUE_c34710 PF01751 Toprim domain ARUE_c34710 PF13368 ARUE_c34710 ARUE_c34720 PF12840 Helix-turn-helix domain ARUE_c34730 PF05175 Methyltransferase small domain ARUE_c34760 PF00581 Rhodanese-like domain ARUE_c34760 PF12368 ARUE_c34760 ARUE_c34770 PF00583 Acetyltransferase (GNAT) family ARUE_c34780 PF00270 DEAD/DEAH box helicase ARUE_c34780 PF00271 Helicase conserved C-terminal domain ARUE_c34780 PF09369 ARUE_c34780 ARUE_c34800 PF07811 ARUE_c34800 ARUE_c34810 PF14029 ARUE_c34810 ARUE_c34820 PF00482 Type II secretion system (T2SS), protein F ARUE_c34840 PF00437 Type II/IV secretion system protein ARUE_c34860 PF00476 DNA polymerase family A ARUE_c34870 PF07411 Domain of unknown function (DUF1508) ARUE_c34880 PF00293 NUDIX domain ARUE_c34890 PF00633 Helix-hairpin-helix motif ARUE_c34890 PF00730 HhH-GPD superfamily base excision DNA repair protein ARUE_c34890 PF10576 Iron-sulfur binding domain of endonuclease III ARUE_c34910 PF00501 AMP-binding enzyme ARUE_c34910 PF13193 AMP-binding enzyme C-terminal domain ARUE_c34910 PF16177 ARUE_c34910 ARUE_c34920 PF00455 ARUE_c34920 ARUE_c34920 PF08220 DeoR-like helix-turn-helix domain ARUE_c34930 PF00005 ABC transporter ARUE_c34950 PF00356 Bacterial regulatory proteins, lacI family ARUE_c34950 PF13377 Periplasmic binding protein-like domain ARUE_c34960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c34970 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c34980 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c34990 PF01547 Bacterial extracellular solute-binding protein ARUE_c35000 PF02065 Melibiase ARUE_c35000 PF16875 ARUE_c35000 ARUE_c35010 PF01220 Dehydroquinase class II ARUE_c35020 PF02674 ARUE_c35020 ARUE_c35020 PF13365 Trypsin-like peptidase domain ARUE_c35030 PF00027 Cyclic nucleotide-binding domain ARUE_c35030 PF13545 Crp-like helix-turn-helix domain ARUE_c35050 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease ARUE_c35060 PF13783 ARUE_c35060 ARUE_c35070 PF00905 Penicillin binding protein transpeptidase domain ARUE_c35070 PF00912 Transglycosylase ARUE_c35080 PF00149 Calcineurin-like phosphoesterase ARUE_c35090 PF03176 MMPL family ARUE_c35100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ARUE_c35110 PF01494 FAD binding domain ARUE_c35120 PF03756 ARUE_c35120 ARUE_c35130 PF00248 Aldo/keto reductase family ARUE_c35140 PF00005 ABC transporter ARUE_c35140 PF00664 ABC transporter transmembrane region ARUE_c35150 PF00005 ABC transporter ARUE_c35150 PF00664 ABC transporter transmembrane region ARUE_c35170 PF13560 Helix-turn-helix domain ARUE_c35180 PF01259 SAICAR synthetase ARUE_c35190 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ARUE_c35190 PF02843 Phosphoribosylglycinamide synthetase, C domain ARUE_c35190 PF02844 Phosphoribosylglycinamide synthetase, N domain ARUE_c35200 PF06089 ARUE_c35200 ARUE_c35220 PF00375 Sodium:dicarboxylate symporter family ARUE_c35230 PF00106 short chain dehydrogenase ARUE_c35250 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ARUE_c35260 PF00456 Transketolase, thiamine diphosphate binding domain ARUE_c35270 PF07411 Domain of unknown function (DUF1508) ARUE_c35280 PF12804 MobA-like NTP transferase domain ARUE_c35290 PF00583 Acetyltransferase (GNAT) family ARUE_c35300 PF00111 2Fe-2S iron-sulfur cluster binding domain ARUE_c35300 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ARUE_c35300 PF01799 [2Fe-2S] binding domain ARUE_c35300 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ARUE_c35310 PF00941 FAD binding domain in molybdopterin dehydrogenase ARUE_c35320 PF02625 XdhC and CoxI family ARUE_c35320 PF13478 XdhC Rossmann domain ARUE_c35330 PF00860 Permease family ARUE_c35340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ARUE_c35350 PF01979 Amidohydrolase family ARUE_c35370 PF13338 ARUE_c35370 ARUE_c35390 PF01014 Uricase ARUE_c35400 PF00860 Permease family ARUE_c35410 PF11066 ARUE_c35410 ARUE_c35420 PF01614 Bacterial transcriptional regulator ARUE_c35420 PF09339 IclR helix-turn-helix domain ARUE_c35430 PF00390 Malic enzyme, N-terminal domain ARUE_c35430 PF03949 Malic enzyme, NAD binding domain ARUE_c35440 PF01274 Malate synthase ARUE_c35460 PF07883 Cupin domain ARUE_c35480 PF04237 YjbR ARUE_c35490 PF04978 Protein of unknown function (DUF664) ARUE_c35500 PF07690 Major Facilitator Superfamily ARUE_c35520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c35530 PF00905 Penicillin binding protein transpeptidase domain ARUE_c35530 PF00912 Transglycosylase ARUE_c35540 PF00117 Glutamine amidotransferase class-I ARUE_c35550 PF07690 Major Facilitator Superfamily ARUE_c35560 PF00909 Ammonium Transporter Family ARUE_c35570 PF09350 ARUE_c35570 ARUE_c35580 PF00484 Carbonic anhydrase ARUE_c35580 PF00916 ARUE_c35580 ARUE_c35600 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c35610 PF02585 GlcNAc-PI de-N-acetylase ARUE_c35610 PF05401 Nodulation protein S (NodS) ARUE_c35620 PF00535 Glycosyl transferase family 2 ARUE_c35630 PF00406 Adenylate kinase ARUE_c35640 PF08327 Activator of Hsp90 ATPase homolog 1-like protein ARUE_c35650 PF12840 Helix-turn-helix domain ARUE_c35660 PF01380 SIS domain ARUE_c35660 PF01418 Helix-turn-helix domain, rpiR family ARUE_c35670 PF00083 Sugar (and other) transporter ARUE_c35690 PF01979 Amidohydrolase family ARUE_c35700 PF03364 Polyketide cyclase / dehydrase and lipid transport ARUE_c35730 PF00535 Glycosyl transferase family 2 ARUE_c35750 PF00293 NUDIX domain ARUE_c35760 PF13930 DNA/RNA non-specific endonuclease ARUE_c35780 PF12146 Putative lysophospholipase ARUE_c35820 PF00005 ABC transporter ARUE_c35820 PF00664 ABC transporter transmembrane region ARUE_c35830 PF00005 ABC transporter ARUE_c35830 PF00664 ABC transporter transmembrane region ARUE_c35840 PF02525 Flavodoxin-like fold ARUE_c35850 PF01638 HxlR-like helix-turn-helix ARUE_c35860 PF00561 alpha/beta hydrolase fold ARUE_c35870 PF01928 CYTH domain ARUE_c35870 PF05235 CHAD domain ARUE_c35880 PF03364 Polyketide cyclase / dehydrase and lipid transport ARUE_c35910 PF01614 Bacterial transcriptional regulator ARUE_c35910 PF09339 IclR helix-turn-helix domain ARUE_c35920 PF02515 CoA-transferase family III ARUE_c35930 PF00378 Enoyl-CoA hydratase/isomerase family ARUE_c35940 PF13521 AAA domain ARUE_c35960 PF00293 NUDIX domain ARUE_c35970 PF01145 SPFH domain / Band 7 family ARUE_c35980 PF01513 ATP-NAD kinase ARUE_c36000 PF01019 Gamma-glutamyltranspeptidase ARUE_c36030 PF00005 ABC transporter ARUE_c36050 PF02624 YcaO-like family ARUE_c36060 PF13649 Methyltransferase domain ARUE_c36080 PF00465 Iron-containing alcohol dehydrogenase ARUE_c36090 PF00202 Aminotransferase class-III ARUE_c36130 PF06283 Trehalose utilisation ARUE_c36140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c36140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c36150 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c36160 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c36170 PF01547 Bacterial extracellular solute-binding protein ARUE_c36180 PF00356 Bacterial regulatory proteins, lacI family ARUE_c36180 PF13377 Periplasmic binding protein-like domain ARUE_c36250 PF06114 Domain of unknown function (DUF955) ARUE_c36250 PF13560 Helix-turn-helix domain ARUE_c36290 PF12787 ARUE_c36290 ARUE_c36300 PF08000 Bacterial PH domain ARUE_c36310 PF05154 ARUE_c36310 ARUE_c36320 PF01261 Xylose isomerase-like TIM barrel ARUE_c36330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ARUE_c36330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ARUE_c36340 PF00205 Thiamine pyrophosphate enzyme, central domain ARUE_c36340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ARUE_c36340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ARUE_c36350 PF02595 Glycerate kinase family ARUE_c36360 PF01979 Amidohydrolase family ARUE_c36370 PF00486 Transcriptional regulatory protein, C terminal ARUE_c36380 PF00578 AhpC/TSA family ARUE_c36390 PF00072 Response regulator receiver domain ARUE_c36390 PF07228 Stage II sporulation protein E (SpoIIE) ARUE_c36400 PF03552 Cellulose synthase ARUE_c36410 PF13466 STAS domain ARUE_c36420 PF13581 Histidine kinase-like ATPase domain ARUE_c36440 PF00266 Aminotransferase class-V ARUE_c36450 PF07690 Major Facilitator Superfamily ARUE_c36460 PF01638 HxlR-like helix-turn-helix ARUE_c36470 PF01569 PAP2 superfamily ARUE_c36480 PF09349 OHCU decarboxylase ARUE_c36490 PF00576 HIUase/Transthyretin family ARUE_c36510 PF00156 Phosphoribosyl transferase domain ARUE_c36510 PF13537 Glutamine amidotransferase domain ARUE_c36520 PF00586 AIR synthase related protein, N-terminal domain ARUE_c36520 PF02769 AIR synthase related protein, C-terminal domain ARUE_c36540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c36550 PF11273 ARUE_c36550 ARUE_c36560 PF13845 ARUE_c36560 ARUE_c36570 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c36570 PF02861 Clp amino terminal domain ARUE_c36570 PF07724 AAA domain (Cdc48 subfamily) ARUE_c36570 PF10431 C-terminal, D2-small domain, of ClpB protein ARUE_c36580 PF01243 Pyridoxamine 5'-phosphate oxidase ARUE_c36590 PF00005 ABC transporter ARUE_c36590 PF03459 TOBE domain ARUE_c36600 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c36610 PF13531 Bacterial extracellular solute-binding protein ARUE_c36620 PF03459 TOBE domain ARUE_c36620 PF12728 Helix-turn-helix domain ARUE_c36630 PF01565 FAD binding domain ARUE_c36630 PF08031 Berberine and berberine like ARUE_c36640 PF13223 ARUE_c36640 ARUE_c36650 PF13088 BNR repeat-like domain ARUE_c36660 PF03733 ARUE_c36660 ARUE_c36670 PF08327 Activator of Hsp90 ATPase homolog 1-like protein ARUE_c36680 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ARUE_c36690 PF05962 HutD ARUE_c36700 PF00893 Small Multidrug Resistance protein ARUE_c36710 PF00893 Small Multidrug Resistance protein ARUE_c36720 PF00248 Aldo/keto reductase family ARUE_c36730 PF00753 Metallo-beta-lactamase superfamily ARUE_c36740 PF00270 DEAD/DEAH box helicase ARUE_c36740 PF00271 Helicase conserved C-terminal domain ARUE_c36750 PF07690 Major Facilitator Superfamily ARUE_c36760 PF00376 MerR family regulatory protein ARUE_c36760 PF09278 MerR, DNA binding ARUE_c36770 PF13649 Methyltransferase domain ARUE_c36780 PF13404 AsnC-type helix-turn-helix domain ARUE_c36790 PF01546 Peptidase family M20/M25/M40 ARUE_c36790 PF07687 Peptidase dimerisation domain ARUE_c36800 PF00083 Sugar (and other) transporter ARUE_c36810 PF07690 Major Facilitator Superfamily ARUE_c36830 PF02390 Putative methyltransferase ARUE_c36850 PF10604 Polyketide cyclase / dehydrase and lipid transport ARUE_c36860 PF13490 Putative zinc-finger ARUE_c36870 PF04542 Sigma-70 region 2 ARUE_c36870 PF04545 Sigma-70, region 4 ARUE_c36880 PF03640 ARUE_c36880 ARUE_c36890 PF13338 ARUE_c36890 ARUE_c36920 PF00005 ABC transporter ARUE_c36930 PF06182 ARUE_c36930 ARUE_c36940 PF06182 ARUE_c36940 ARUE_c36960 PF00176 SNF2 family N-terminal domain ARUE_c36960 PF00271 Helicase conserved C-terminal domain ARUE_c36960 PF08455 ARUE_c36960 ARUE_c36980 PF07690 Major Facilitator Superfamily ARUE_c36990 PF00392 Bacterial regulatory proteins, gntR family ARUE_c36990 PF07729 FCD domain ARUE_c37020 PF01425 Amidase ARUE_c37030 PF04371 Porphyromonas-type peptidyl-arginine deiminase ARUE_c37040 PF00440 Bacterial regulatory proteins, tetR family ARUE_c37040 PF13977 Bacterial transcriptional repressor ARUE_c37070 PF11239 ARUE_c37070 ARUE_c37090 PF01614 Bacterial transcriptional regulator ARUE_c37090 PF09339 IclR helix-turn-helix domain ARUE_c37100 PF01614 Bacterial transcriptional regulator ARUE_c37100 PF09339 IclR helix-turn-helix domain ARUE_c37110 PF00107 Zinc-binding dehydrogenase ARUE_c37110 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c37120 PF00456 Transketolase, thiamine diphosphate binding domain ARUE_c37130 PF02779 Transketolase, pyrimidine binding domain ARUE_c37130 PF02780 Transketolase, C-terminal domain ARUE_c37140 PF00294 pfkB family carbohydrate kinase ARUE_c37150 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c37160 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c37170 PF07690 Major Facilitator Superfamily ARUE_c37180 PF00106 short chain dehydrogenase ARUE_c37190 PF13411 MerR HTH family regulatory protein ARUE_c37200 PF00226 DnaJ domain ARUE_c37200 PF01556 DnaJ C terminal domain ARUE_c37210 PF01025 GrpE ARUE_c37220 PF00012 Hsp70 protein ARUE_c37240 PF05675 ARUE_c37240 ARUE_c37250 PF09995 ARUE_c37250 ARUE_c37260 PF00440 Bacterial regulatory proteins, tetR family ARUE_c37270 PF01370 NAD dependent epimerase/dehydratase family ARUE_c37280 PF05721 Phytanoyl-CoA dioxygenase (PhyH) ARUE_c37290 PF02311 AraC-like ligand binding domain ARUE_c37290 PF12833 Helix-turn-helix domain ARUE_c37310 PF00480 ROK family ARUE_c37320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c37320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c37330 PF00884 Sulfatase ARUE_c37340 PF13416 Bacterial extracellular solute-binding protein ARUE_c37350 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c37360 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c37380 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ARUE_c37390 PF02517 CAAX protease self-immunity ARUE_c37400 PF04191 Phospholipid methyltransferase ARUE_c37410 PF06250 ARUE_c37410 ARUE_c37420 PF08220 DeoR-like helix-turn-helix domain ARUE_c37420 PF13377 Periplasmic binding protein-like domain ARUE_c37430 PF13360 PQQ-like domain ARUE_c37440 PF13416 Bacterial extracellular solute-binding protein ARUE_c37450 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c37460 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c37470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c37470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c37480 PF00122 E1-E2 ATPase ARUE_c37480 PF00702 haloacid dehalogenase-like hydrolase ARUE_c37500 PF09423 PhoD-like phosphatase ARUE_c37500 PF16655 ARUE_c37500 ARUE_c37520 PF00155 Aminotransferase class I and II ARUE_c37530 PF00107 Zinc-binding dehydrogenase ARUE_c37530 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c37540 PF02627 Carboxymuconolactone decarboxylase family ARUE_c37550 PF04542 Sigma-70 region 2 ARUE_c37550 PF08281 Sigma-70, region 4 ARUE_c37570 PF01179 Copper amine oxidase, enzyme domain ARUE_c37570 PF02728 Copper amine oxidase, N3 domain ARUE_c37580 PF00440 Bacterial regulatory proteins, tetR family ARUE_c37580 PF13977 Bacterial transcriptional repressor ARUE_c37590 PF01810 ARUE_c37590 ARUE_c37600 PF00171 Aldehyde dehydrogenase family ARUE_c37610 PF00800 Prephenate dehydratase ARUE_c37620 PF01451 Low molecular weight phosphotyrosine protein phosphatase ARUE_c37630 PF01451 Low molecular weight phosphotyrosine protein phosphatase ARUE_c37640 PF13738 Pyridine nucleotide-disulphide oxidoreductase ARUE_c37650 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c37660 PF01451 Low molecular weight phosphotyrosine protein phosphatase ARUE_c37670 PF01451 Low molecular weight phosphotyrosine protein phosphatase ARUE_c37670 PF12840 Helix-turn-helix domain ARUE_c37680 PF00230 Major intrinsic protein ARUE_c37700 PF01022 Bacterial regulatory protein, arsR family ARUE_c37710 PF13420 Acetyltransferase (GNAT) domain ARUE_c37720 PF03176 MMPL family ARUE_c37730 PF12802 MarR family ARUE_c37740 PF13847 Methyltransferase domain ARUE_c37750 PF03795 YCII-related domain ARUE_c37760 PF04542 Sigma-70 region 2 ARUE_c37760 PF08281 Sigma-70, region 4 ARUE_c37770 PF00248 Aldo/keto reductase family ARUE_c37780 PF00817 impB/mucB/samB family ARUE_c37780 PF11799 impB/mucB/samB family C-terminal domain ARUE_c37790 PF01810 ARUE_c37790 ARUE_c37810 PF00356 Bacterial regulatory proteins, lacI family ARUE_c37810 PF13377 Periplasmic binding protein-like domain ARUE_c37820 PF01156 Inosine-uridine preferring nucleoside hydrolase ARUE_c37830 PF07690 Major Facilitator Superfamily ARUE_c37840 PF00294 pfkB family carbohydrate kinase ARUE_c37860 PF00440 Bacterial regulatory proteins, tetR family ARUE_c37870 PF01451 Low molecular weight phosphotyrosine protein phosphatase ARUE_c37880 PF00425 chorismate binding enzyme ARUE_c37880 PF04715 Anthranilate synthase component I, N terminal region ARUE_c37890 PF13091 PLD-like domain ARUE_c37890 PF13396 ARUE_c37890 ARUE_c37900 PF01063 Aminotransferase class IV ARUE_c37910 PF00324 Amino acid permease ARUE_c37920 PF02627 Carboxymuconolactone decarboxylase family ARUE_c37930 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c37940 PF00221 Aromatic amino acid lyase ARUE_c37950 PF00296 Luciferase-like monooxygenase ARUE_c37960 PF00916 ARUE_c37960 ARUE_c37960 PF01740 STAS domain ARUE_c37970 PF08410 ARUE_c37970 ARUE_c37980 PF00581 Rhodanese-like domain ARUE_c37990 PF01053 Cys/Met metabolism PLP-dependent enzyme ARUE_c38010 PF04107 Glutamate-cysteine ligase family 2(GCS2) ARUE_c38020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ARUE_c38020 PF01381 Helix-turn-helix ARUE_c38030 PF04954 Siderophore-interacting protein ARUE_c38030 PF08021 Siderophore-interacting FAD-binding domain ARUE_c38040 PF01804 Penicillin amidase ARUE_c38050 PF13523 Acetyltransferase (GNAT) domain ARUE_c38060 PF02361 Cobalt transport protein ARUE_c38070 PF00005 ABC transporter ARUE_c38080 PF09819 ARUE_c38080 ARUE_c38090 PF00293 NUDIX domain ARUE_c38100 PF14019 ARUE_c38100 ARUE_c38110 PF03334 ARUE_c38110 ARUE_c38120 PF01899 ARUE_c38120 ARUE_c38130 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ARUE_c38140 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ARUE_c38150 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ARUE_c38150 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ARUE_c38150 PF04039 ARUE_c38150 ARUE_c38150 PF13244 ARUE_c38150 ARUE_c38160 PF11700 ARUE_c38160 ARUE_c38170 PF02080 TrkA-C domain ARUE_c38180 PF00999 Sodium/hydrogen exchanger family ARUE_c38200 PF00692 dUTPase ARUE_c38210 PF00188 Cysteine-rich secretory protein family ARUE_c38230 PF02557 D-alanyl-D-alanine carboxypeptidase ARUE_c38250 PF12680 SnoaL-like domain ARUE_c38260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ARUE_c38260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ARUE_c38270 PF05977 Transmembrane secretion effector ARUE_c38280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c38280 PF03466 LysR substrate binding domain ARUE_c38290 PF13302 Acetyltransferase (GNAT) domain ARUE_c38300 PF01261 Xylose isomerase-like TIM barrel ARUE_c38310 PF00326 Prolyl oligopeptidase family ARUE_c38310 PF07859 alpha/beta hydrolase fold ARUE_c38320 PF00356 Bacterial regulatory proteins, lacI family ARUE_c38320 PF13377 Periplasmic binding protein-like domain ARUE_c38330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c38340 PF06187 Protein of unknown function (DUF993) ARUE_c38350 PF01261 Xylose isomerase-like TIM barrel ARUE_c38370 PF03631 ARUE_c38370 ARUE_c38380 PF00480 ROK family ARUE_c38380 PF09339 IclR helix-turn-helix domain ARUE_c38390 PF01261 Xylose isomerase-like TIM barrel ARUE_c38400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ARUE_c38400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ARUE_c38410 PF00356 Bacterial regulatory proteins, lacI family ARUE_c38410 PF13377 Periplasmic binding protein-like domain ARUE_c38420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ARUE_c38420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ARUE_c38430 PF00596 Class II Aldolase and Adducin N-terminal domain ARUE_c38440 PF02610 L-arabinose isomerase ARUE_c38440 PF11762 L-arabinose isomerase C-terminal domain ARUE_c38450 PF01263 Aldose 1-epimerase ARUE_c38460 PF00356 Bacterial regulatory proteins, lacI family ARUE_c38460 PF13377 Periplasmic binding protein-like domain ARUE_c38470 PF05336 Domain of unknown function (DUF718) ARUE_c38480 PF06134 L-rhamnose isomerase (RhaA) ARUE_c38490 PF00596 Class II Aldolase and Adducin N-terminal domain ARUE_c38490 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c38500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ARUE_c38500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ARUE_c38510 PF01381 Helix-turn-helix ARUE_c38530 PF02261 Aspartate decarboxylase ARUE_c38540 PF03547 ARUE_c38540 ARUE_c38550 PF00723 Glycosyl hydrolases family 15 ARUE_c38550 PF02358 Trehalose-phosphatase ARUE_c38560 PF00296 Luciferase-like monooxygenase ARUE_c38570 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c38580 PF00291 Pyridoxal-phosphate dependent enzyme ARUE_c38590 PF13508 Acetyltransferase (GNAT) domain ARUE_c38600 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella ARUE_c38620 PF00296 Luciferase-like monooxygenase ARUE_c38630 PF00296 Luciferase-like monooxygenase ARUE_c38640 PF07920 Protein of unknown function (DUF1684) ARUE_c38650 PF00296 Luciferase-like monooxygenase ARUE_c38660 PF00497 Bacterial extracellular solute-binding proteins, family 3 ARUE_c38670 PF00005 ABC transporter ARUE_c38680 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c38690 PF13454 FAD-NAD(P)-binding ARUE_c38700 PF00583 Acetyltransferase (GNAT) family ARUE_c38710 PF05872 ARUE_c38710 ARUE_c38730 PF04480 Protein of unknown function (DUF559) ARUE_c38740 PF13905 Thioredoxin-like ARUE_c38750 PF05425 ARUE_c38750 ARUE_c38750 PF09678 ARUE_c38750 ARUE_c38760 PF00216 Bacterial DNA-binding protein ARUE_c38770 PF13302 Acetyltransferase (GNAT) domain ARUE_c38820 PF00561 alpha/beta hydrolase fold ARUE_c38830 PF00486 Transcriptional regulatory protein, C terminal ARUE_c38830 PF03704 Bacterial transcriptional activator domain ARUE_c38870 PF00253 Ribosomal protein S14p/S29e ARUE_c38880 PF00471 Ribosomal protein L33 ARUE_c38890 PF00830 Ribosomal L28 family ARUE_c38900 PF13472 GDSL-like Lipase/Acylhydrolase family ARUE_c38910 PF01047 MarR family ARUE_c38920 PF03795 YCII-related domain ARUE_c38930 PF13472 GDSL-like Lipase/Acylhydrolase family ARUE_c38940 PF13472 GDSL-like Lipase/Acylhydrolase family ARUE_c38950 PF04954 Siderophore-interacting protein ARUE_c38950 PF08021 Siderophore-interacting FAD-binding domain ARUE_c38960 PF00005 ABC transporter ARUE_c38970 PF01032 FecCD transport family ARUE_c38980 PF01032 FecCD transport family ARUE_c38990 PF01497 Periplasmic binding protein ARUE_c39010 PF16571 ARUE_c39010 ARUE_c39020 PF13555 P-loop containing region of AAA domain ARUE_c39020 PF13558 Putative exonuclease SbcCD, C subunit ARUE_c39030 PF13835 ARUE_c39030 ARUE_c39040 PF11855 ARUE_c39040 ARUE_c39060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ARUE_c39060 PF02770 Acyl-CoA dehydrogenase, middle domain ARUE_c39060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ARUE_c39070 PF02810 SEC-C motif ARUE_c39090 PF01613 Flavin reductase like domain ARUE_c39100 PF00248 Aldo/keto reductase family ARUE_c39110 PF00174 Oxidoreductase molybdopterin binding domain ARUE_c39110 PF03404 Mo-co oxidoreductase dimerisation domain ARUE_c39120 PF00248 Aldo/keto reductase family ARUE_c39140 PF00106 short chain dehydrogenase ARUE_c39150 PF01596 O-methyltransferase ARUE_c39160 PF13360 PQQ-like domain ARUE_c39170 PF01554 MatE ARUE_c39190 PF00491 Arginase family ARUE_c39200 PF01479 S4 domain ARUE_c39230 PF12823 ARUE_c39230 ARUE_c39260 PF00392 Bacterial regulatory proteins, gntR family ARUE_c39260 PF07729 FCD domain ARUE_c39270 PF06089 ARUE_c39270 ARUE_c39280 PF00206 Lyase ARUE_c39280 PF10415 Fumarase C C-terminus ARUE_c39290 PF00324 Amino acid permease ARUE_c39300 PF00392 Bacterial regulatory proteins, gntR family ARUE_c39300 PF07729 FCD domain ARUE_c39310 PF04909 Amidohydrolase ARUE_c39320 PF00248 Aldo/keto reductase family ARUE_c39330 PF05336 Domain of unknown function (DUF718) ARUE_c39340 PF01120 Alpha-L-fucosidase ARUE_c39350 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ARUE_c39350 PF13378 Enolase C-terminal domain-like ARUE_c39360 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c39370 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c39380 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella ARUE_c39390 PF00004 ATPase family associated with various cellular activities (AAA) ARUE_c39390 PF00583 Acetyltransferase (GNAT) family ARUE_c39400 PF06772 ARUE_c39400 ARUE_c39410 PF13328 HD domain ARUE_c39420 PF00106 short chain dehydrogenase ARUE_c39430 PF00440 Bacterial regulatory proteins, tetR family ARUE_c39430 PF13305 WHG domain ARUE_c39440 PF00144 Beta-lactamase ARUE_c39450 PF00749 tRNA synthetases class I (E and Q), catalytic domain ARUE_c39460 PF01037 AsnC family ARUE_c39460 PF13404 AsnC-type helix-turn-helix domain ARUE_c39470 PF01037 AsnC family ARUE_c39470 PF13412 Winged helix-turn-helix DNA-binding ARUE_c39480 PF01810 ARUE_c39480 ARUE_c39490 PF09374 Predicted Peptidoglycan domain ARUE_c39500 PF08327 Activator of Hsp90 ATPase homolog 1-like protein ARUE_c39510 PF12840 Helix-turn-helix domain ARUE_c39540 PF14325 ARUE_c39540 ARUE_c39550 PF00072 Response regulator receiver domain ARUE_c39550 PF00196 Bacterial regulatory proteins, luxR family ARUE_c39560 PF07730 Histidine kinase ARUE_c39570 PF01614 Bacterial transcriptional regulator ARUE_c39570 PF09339 IclR helix-turn-helix domain ARUE_c39580 PF00557 Metallopeptidase family M24 ARUE_c39580 PF01321 Creatinase/Prolidase N-terminal domain ARUE_c39590 PF07690 Major Facilitator Superfamily ARUE_c39600 PF00392 Bacterial regulatory proteins, gntR family ARUE_c39600 PF07729 FCD domain ARUE_c39610 PF00464 Serine hydroxymethyltransferase ARUE_c39620 PF01266 FAD dependent oxidoreductase ARUE_c39630 PF04267 Sarcosine oxidase, delta subunit family ARUE_c39640 PF01571 Aminomethyltransferase folate-binding domain ARUE_c39640 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c39640 PF08669 Glycine cleavage T-protein C-terminal barrel domain ARUE_c39640 PF13510 2Fe-2S iron-sulfur cluster binding domain ARUE_c39650 PF04268 Sarcosine oxidase, gamma subunit family ARUE_c39660 PF03313 ARUE_c39660 ARUE_c39660 PF03315 Serine dehydratase beta chain ARUE_c39670 PF00551 Formyl transferase ARUE_c39680 PF04306 ARUE_c39680 ARUE_c39690 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase ARUE_c39700 PF00390 Malic enzyme, N-terminal domain ARUE_c39700 PF03949 Malic enzyme, NAD binding domain ARUE_c39710 PF00440 Bacterial regulatory proteins, tetR family ARUE_c39720 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella ARUE_c39730 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella ARUE_c39750 PF07690 Major Facilitator Superfamily ARUE_c39760 PF03737 Demethylmenaquinone methyltransferase ARUE_c39770 PF07690 Major Facilitator Superfamily ARUE_c39780 PF00221 Aromatic amino acid lyase ARUE_c39790 PF01175 Urocanase ARUE_c39790 PF17391 ARUE_c39790 ARUE_c39790 PF17392 ARUE_c39790 ARUE_c39800 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ARUE_c39810 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c39820 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c39830 PF00005 ABC transporter ARUE_c39840 PF01614 Bacterial transcriptional regulator ARUE_c39840 PF09339 IclR helix-turn-helix domain ARUE_c39850 PF01546 Peptidase family M20/M25/M40 ARUE_c39850 PF07687 Peptidase dimerisation domain ARUE_c39860 PF01979 Amidohydrolase family ARUE_c39870 PF00083 Sugar (and other) transporter ARUE_c39880 PF07690 Major Facilitator Superfamily ARUE_c39890 PF01047 MarR family ARUE_c39900 PF00583 Acetyltransferase (GNAT) family ARUE_c39910 PF03551 Transcriptional regulator PadR-like family ARUE_c39920 PF06304 Protein of unknown function (DUF1048) ARUE_c39930 PF00005 ABC transporter ARUE_c39940 PF01061 ARUE_c39940 ARUE_c39950 PF00324 Amino acid permease ARUE_c39970 PF00005 ABC transporter ARUE_c39980 PF01032 FecCD transport family ARUE_c39990 PF01032 FecCD transport family ARUE_c40000 PF01497 Periplasmic binding protein ARUE_c40010 PF01232 Mannitol dehydrogenase Rossmann domain ARUE_c40010 PF08125 Mannitol dehydrogenase C-terminal domain ARUE_c40020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ARUE_c40020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ARUE_c40020 PF02378 Phosphotransferase system, EIIC ARUE_c40030 PF00440 Bacterial regulatory proteins, tetR family ARUE_c40040 PF00391 PEP-utilising enzyme, mobile domain ARUE_c40040 PF02896 PEP-utilising enzyme, TIM barrel domain ARUE_c40040 PF05524 PEP-utilising enzyme, N-terminal ARUE_c40050 PF00381 PTS HPr component phosphorylation site ARUE_c40060 PF12728 Helix-turn-helix domain ARUE_c40070 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain ARUE_c40080 PF12697 Alpha/beta hydrolase family ARUE_c40090 PF01068 ATP dependent DNA ligase domain ARUE_c40090 PF04679 ATP dependent DNA ligase C terminal region ARUE_c40110 PF13556 PucR C-terminal helix-turn-helix domain ARUE_c40120 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ARUE_c40120 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ARUE_c40140 PF04545 Sigma-70, region 4 ARUE_c40160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ARUE_c40160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ARUE_c40170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ARUE_c40180 PF00005 ABC transporter ARUE_c40180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ARUE_c40190 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c40190 PF12911 ARUE_c40190 ARUE_c40200 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c40220 PF00440 Bacterial regulatory proteins, tetR family ARUE_c40230 PF03358 NADPH-dependent FMN reductase ARUE_c40240 PF10646 ARUE_c40240 ARUE_c40270 PF13714 Phosphoenolpyruvate phosphomutase ARUE_c40280 PF00155 Aminotransferase class I and II ARUE_c40290 PF00582 Universal stress protein family ARUE_c40310 PF13520 Amino acid permease ARUE_c40320 PF07969 Amidohydrolase family ARUE_c40330 PF01569 PAP2 superfamily ARUE_c40340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ARUE_c40340 PF00364 Biotin-requiring enzyme ARUE_c40340 PF02817 e3 binding domain ARUE_c40350 PF02779 Transketolase, pyrimidine binding domain ARUE_c40350 PF02780 Transketolase, C-terminal domain ARUE_c40360 PF00676 Dehydrogenase E1 component ARUE_c40380 PF00155 Aminotransferase class I and II ARUE_c40390 PF04020 ARUE_c40390 ARUE_c40410 PF00206 Lyase ARUE_c40410 PF08328 Adenylosuccinate lyase C-terminal ARUE_c40420 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c40430 PF00583 Acetyltransferase (GNAT) family ARUE_c40440 PF03061 Thioesterase superfamily ARUE_c40460 PF00106 short chain dehydrogenase ARUE_c40470 PF00083 Sugar (and other) transporter ARUE_c40480 PF02626 Allophanate hydrolase subunit 2 ARUE_c40490 PF02682 Allophanate hydrolase subunit 1 ARUE_c40500 PF03746 LamB/YcsF family ARUE_c40510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c40510 PF03466 LysR substrate binding domain ARUE_c40530 PF03737 Demethylmenaquinone methyltransferase ARUE_c40540 PF00155 Aminotransferase class I and II ARUE_c40560 PF12680 SnoaL-like domain ARUE_c40570 PF03328 HpcH/HpaI aldolase/citrate lyase family ARUE_c40580 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c40590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c40600 PF00171 Aldehyde dehydrogenase family ARUE_c40610 PF00392 Bacterial regulatory proteins, gntR family ARUE_c40610 PF07729 FCD domain ARUE_c40620 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c40620 PF03737 Demethylmenaquinone methyltransferase ARUE_c40630 PF13376 ARUE_c40630 ARUE_c40640 PF12697 Alpha/beta hydrolase family ARUE_c40660 PF05532 CsbD-like ARUE_c40680 PF06445 GyrI-like small molecule binding domain ARUE_c40680 PF12833 Helix-turn-helix domain ARUE_c40690 PF00857 Isochorismatase family ARUE_c40700 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c40710 PF06724 ARUE_c40710 ARUE_c40730 PF10022 ARUE_c40730 ARUE_c40740 PF03780 ARUE_c40740 ARUE_c40780 PF04542 Sigma-70 region 2 ARUE_c40780 PF08281 Sigma-70, region 4 ARUE_c40810 PF08220 DeoR-like helix-turn-helix domain ARUE_c40810 PF13377 Periplasmic binding protein-like domain ARUE_c40820 PF01547 Bacterial extracellular solute-binding protein ARUE_c40830 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c40840 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c40850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c40850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c40870 PF07690 Major Facilitator Superfamily ARUE_c40880 PF00512 His Kinase A (phospho-acceptor) domain ARUE_c40880 PF01590 GAF domain ARUE_c40880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c40890 PF01522 Polysaccharide deacetylase ARUE_c40900 PF00069 Protein kinase domain ARUE_c40910 PF00440 Bacterial regulatory proteins, tetR family ARUE_c40920 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ARUE_c40930 PF00144 Beta-lactamase ARUE_c40940 PF07969 Amidohydrolase family ARUE_c40950 PF12697 Alpha/beta hydrolase family ARUE_c40960 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c40980 PF00440 Bacterial regulatory proteins, tetR family ARUE_c40980 PF13977 Bacterial transcriptional repressor ARUE_c40990 PF13520 Amino acid permease ARUE_c41000 PF00795 Carbon-nitrogen hydrolase ARUE_c41010 PF02535 ARUE_c41010 ARUE_c41020 PF05368 NmrA-like family ARUE_c41030 PF01381 Helix-turn-helix ARUE_c41030 PF07883 Cupin domain ARUE_c41040 PF00892 EamA-like transporter family ARUE_c41050 PF00701 Dihydrodipicolinate synthetase family ARUE_c41060 PF08240 Alcohol dehydrogenase GroES-like domain ARUE_c41060 PF13602 Zinc-binding dehydrogenase ARUE_c41070 PF00440 Bacterial regulatory proteins, tetR family ARUE_c41070 PF02909 Tetracyclin repressor, C-terminal all-alpha domain ARUE_c41080 PF00723 Glycosyl hydrolases family 15 ARUE_c41100 PF05239 PRC-barrel domain ARUE_c41100 PF09557 ARUE_c41100 ARUE_c41120 PF00282 Pyridoxal-dependent decarboxylase conserved domain ARUE_c41130 PF13230 Glutamine amidotransferases class-II ARUE_c41140 PF07690 Major Facilitator Superfamily ARUE_c41150 PF13560 Helix-turn-helix domain ARUE_c41170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c41180 PF13411 MerR HTH family regulatory protein ARUE_c41190 PF02720 ARUE_c41190 ARUE_c41200 PF01494 FAD binding domain ARUE_c41210 PF01614 Bacterial transcriptional regulator ARUE_c41210 PF09339 IclR helix-turn-helix domain ARUE_c41220 PF07690 Major Facilitator Superfamily ARUE_c41240 PF00717 Peptidase S24-like ARUE_c41250 PF12389 ARUE_c41250 ARUE_c41280 PF13396 ARUE_c41280 ARUE_c41290 PF01594 ARUE_c41290 ARUE_c41300 PF13091 PLD-like domain ARUE_c41300 PF13396 ARUE_c41300 ARUE_c41310 PF09335 ARUE_c41310 ARUE_c41330 PF00069 Protein kinase domain ARUE_c41350 PF12802 MarR family ARUE_c41360 PF13515 ARUE_c41360 ARUE_c41420 PF04055 Radical SAM superfamily ARUE_c41420 PF16881 ARUE_c41420 ARUE_c41430 PF03313 ARUE_c41430 ARUE_c41430 PF03315 Serine dehydratase beta chain ARUE_c41440 PF00464 Serine hydroxymethyltransferase ARUE_c41450 PF01597 Glycine cleavage H-protein ARUE_c41460 PF01571 Aminomethyltransferase folate-binding domain ARUE_c41460 PF08669 Glycine cleavage T-protein C-terminal barrel domain ARUE_c41470 PF02347 Glycine cleavage system P-protein ARUE_c41480 PF07905 ARUE_c41480 ARUE_c41480 PF13556 PucR C-terminal helix-turn-helix domain ARUE_c41490 PF00491 Arginase family ARUE_c41500 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ARUE_c41510 PF00171 Aldehyde dehydrogenase family ARUE_c41520 PF01565 FAD binding domain ARUE_c41520 PF04030 D-arabinono-1,4-lactone oxidase ARUE_c41530 PF01741 Large-conductance mechanosensitive channel, MscL ARUE_c41550 PF01872 RibD C-terminal domain ARUE_c41580 PF02233 NAD(P) transhydrogenase beta subunit ARUE_c41590 PF12769 Domain of unknown function (DUF3814) ARUE_c41600 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ARUE_c41600 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ARUE_c41610 PF03358 NADPH-dependent FMN reductase ARUE_c41630 PF13419 Haloacid dehalogenase-like hydrolase ARUE_c41650 PF03807 NADP oxidoreductase coenzyme F420-dependent ARUE_c41670 PF07848 PaaX-like protein ARUE_c41670 PF08223 PaaX-like protein C-terminal domain ARUE_c41700 PF03061 Thioesterase superfamily ARUE_c41710 PF07690 Major Facilitator Superfamily ARUE_c41720 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ARUE_c41720 PF01494 FAD binding domain ARUE_c41730 PF00501 AMP-binding enzyme ARUE_c41730 PF13193 AMP-binding enzyme C-terminal domain ARUE_c41740 PF13622 Thioesterase-like superfamily ARUE_c41750 PF07883 Cupin domain ARUE_c41760 PF01557 Fumarylacetoacetate (FAA) hydrolase family ARUE_c41770 PF01042 Endoribonuclease L-PSP ARUE_c41780 PF08818 Domain of unknown function (DU1801) ARUE_c41790 PF01614 Bacterial transcriptional regulator ARUE_c41790 PF09339 IclR helix-turn-helix domain ARUE_c41800 PF01144 Coenzyme A transferase ARUE_c41810 PF01144 Coenzyme A transferase ARUE_c41820 PF00108 Thiolase, N-terminal domain ARUE_c41820 PF02803 Thiolase, C-terminal domain ARUE_c41830 PF02627 Carboxymuconolactone decarboxylase family ARUE_c41840 PF12697 Alpha/beta hydrolase family ARUE_c41850 PF00206 Lyase ARUE_c41860 PF00775 Dioxygenase ARUE_c41870 PF00775 Dioxygenase ARUE_c41870 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ARUE_c41880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ARUE_c41880 PF01261 Xylose isomerase-like TIM barrel ARUE_c41880 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ARUE_c41890 PF08501 Shikimate dehydrogenase substrate binding domain ARUE_c41900 PF01614 Bacterial transcriptional regulator ARUE_c41900 PF09339 IclR helix-turn-helix domain ARUE_c41910 PF00083 Sugar (and other) transporter ARUE_c41910 PF07690 Major Facilitator Superfamily ARUE_c41920 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella ARUE_c41940 PF02597 ThiS family ARUE_c41960 PF00990 GGDEF domain ARUE_c41970 PF13714 Phosphoenolpyruvate phosphomutase ARUE_c41980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ARUE_c41980 PF03466 LysR substrate binding domain ARUE_c41990 PF10688 ARUE_c41990 ARUE_c42010 PF00582 Universal stress protein family ARUE_c42020 PF02447 ARUE_c42020 ARUE_c42030 PF01081 KDPG and KHG aldolase ARUE_c42040 PF07969 Amidohydrolase family ARUE_c42050 PF01168 Alanine racemase, N-terminal domain ARUE_c42050 PF14031 Putative serine dehydratase domain ARUE_c42060 PF00294 pfkB family carbohydrate kinase ARUE_c42070 PF01614 Bacterial transcriptional regulator ARUE_c42070 PF09339 IclR helix-turn-helix domain ARUE_c42080 PF01042 Endoribonuclease L-PSP ARUE_c42090 PF03547 ARUE_c42090 ARUE_c42100 PF14067 ARUE_c42100 ARUE_c42110 PF01370 NAD dependent epimerase/dehydratase family ARUE_c42120 PF00128 Alpha amylase, catalytic domain ARUE_c42130 PF00665 Integrase core domain ARUE_c42130 PF13011 ARUE_c42130 ARUE_c42140 PF03976 Polyphosphate kinase 2 (PPK2) ARUE_c42150 PF13302 Acetyltransferase (GNAT) domain ARUE_c42160 PF01380 SIS domain ARUE_c42160 PF01418 Helix-turn-helix domain, rpiR family ARUE_c42170 PF07075 Protein of unknown function (DUF1343) ARUE_c42180 PF00933 Glycosyl hydrolase family 3 N terminal domain ARUE_c42180 PF01915 Glycosyl hydrolase family 3 C-terminal domain ARUE_c42190 PF02698 DUF218 domain ARUE_c42200 PF14534 Domain of unknown function (DUF4440) ARUE_c42210 PF00356 Bacterial regulatory proteins, lacI family ARUE_c42210 PF13377 Periplasmic binding protein-like domain ARUE_c42220 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c42230 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c42240 PF01547 Bacterial extracellular solute-binding protein ARUE_c42250 PF02449 Beta-galactosidase ARUE_c42250 PF08532 Beta-galactosidase trimerisation domain ARUE_c42270 PF02586 Uncharacterised ACR, COG2135 ARUE_c42280 PF12833 Helix-turn-helix domain ARUE_c42310 PF12697 Alpha/beta hydrolase family ARUE_c42320 PF00581 Rhodanese-like domain ARUE_c42330 PF01614 Bacterial transcriptional regulator ARUE_c42330 PF09339 IclR helix-turn-helix domain ARUE_c42340 PF00728 Glycosyl hydrolase family 20, catalytic domain ARUE_c42340 PF02838 Glycosyl hydrolase family 20, domain 2 ARUE_c42350 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c42360 PF00528 Binding-protein-dependent transport system inner membrane component ARUE_c42370 PF13416 Bacterial extracellular solute-binding protein ARUE_c42380 PF02583 Metal-sensitive transcriptional repressor ARUE_c42390 PF00403 Heavy-metal-associated domain ARUE_c42400 PF00122 E1-E2 ATPase ARUE_c42400 PF00403 Heavy-metal-associated domain ARUE_c42400 PF00702 haloacid dehalogenase-like hydrolase ARUE_c42410 PF10041 ARUE_c42410 ARUE_c42420 PF06013 Proteins of 100 residues with WXG ARUE_c42430 PF00892 EamA-like transporter family ARUE_c42440 PF07336 Protein of unknown function (DUF1470) ARUE_c42440 PF11706 CGNR zinc finger ARUE_c42470 PF01554 MatE ARUE_c42490 PF07681 ARUE_c42490 ARUE_c42500 PF00391 PEP-utilising enzyme, mobile domain ARUE_c42520 PF03061 Thioesterase superfamily ARUE_c42530 PF00196 Bacterial regulatory proteins, luxR family ARUE_c42570 PF00392 Bacterial regulatory proteins, gntR family ARUE_c42570 PF07729 FCD domain ARUE_c42580 PF02779 Transketolase, pyrimidine binding domain ARUE_c42580 PF02780 Transketolase, C-terminal domain ARUE_c42590 PF00456 Transketolase, thiamine diphosphate binding domain ARUE_c42600 PF00083 Sugar (and other) transporter ARUE_c42600 PF07690 Major Facilitator Superfamily ARUE_c42610 PF01261 Xylose isomerase-like TIM barrel ARUE_c42620 PF13561 Enoyl-(Acyl carrier protein) reductase ARUE_c42630 PF02733 Dak1 domain ARUE_c42630 PF02734 DAK2 domain ARUE_c42640 PF02502 Ribose/Galactose Isomerase ARUE_c42650 PF06993 ARUE_c42650 ARUE_c42680 PF00772 DnaB-like helicase N terminal domain ARUE_c42680 PF03796 DnaB-like helicase C terminal domain ARUE_c42710 PF13279 Thioesterase-like superfamily ARUE_c42720 PF08877 MepB protein ARUE_c42730 PF03358 NADPH-dependent FMN reductase ARUE_c42750 PF07859 alpha/beta hydrolase fold ARUE_c42760 PF02447 ARUE_c42760 ARUE_c42770 PF02515 CoA-transferase family III ARUE_c42780 PF00682 HMGL-like ARUE_c42790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ARUE_c42790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ARUE_c42800 PF02595 Glycerate kinase family ARUE_c42820 PF14117 ARUE_c42820 ARUE_c42840 PF00781 Diacylglycerol kinase catalytic domain ARUE_c42850 PF08241 Methyltransferase domain ARUE_c42870 PF01614 Bacterial transcriptional regulator ARUE_c42870 PF09339 IclR helix-turn-helix domain ARUE_c42880 PF00005 ABC transporter ARUE_c42900 PF02567 Phenazine biosynthesis-like protein ARUE_c42910 PF08818 Domain of unknown function (DU1801) ARUE_c42920 PF01281 Ribosomal protein L9, N-terminal domain ARUE_c42920 PF03948 Ribosomal protein L9, C-terminal domain ARUE_c42930 PF01084 Ribosomal protein S18 ARUE_c42940 PF00436 Single-strand binding protein family ARUE_c42950 PF01250 Ribosomal protein S6 ARUE_c42960 PF02694 ARUE_c42960 ARUE_c42990 PF00324 Amino acid permease ARUE_c43000 PF02127 Aminopeptidase I zinc metalloprotease (M18) ARUE_c43010 PF00775 Dioxygenase ARUE_c43020 PF00072 Response regulator receiver domain ARUE_c43020 PF00196 Bacterial regulatory proteins, luxR family ARUE_c43030 PF07730 Histidine kinase ARUE_c43050 PF00005 ABC transporter ARUE_c43060 PF00781 Diacylglycerol kinase catalytic domain ARUE_c43060 PF01569 PAP2 superfamily ARUE_c43070 PF07690 Major Facilitator Superfamily ARUE_c43080 PF00455 ARUE_c43080 ARUE_c43080 PF08220 DeoR-like helix-turn-helix domain ARUE_c43090 PF00005 ABC transporter ARUE_c43100 PF00144 Beta-lactamase ARUE_c43110 PF00905 Penicillin binding protein transpeptidase domain ARUE_c43110 PF03717 Penicillin-binding Protein dimerisation domain ARUE_c43110 PF05223 NTF2-like N-terminal transpeptidase domain ARUE_c43120 PF01055 Glycosyl hydrolases family 31 ARUE_c43120 PF08305 NPCBM/NEW2 domain ARUE_c43120 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase ARUE_c43120 PF16338 ARUE_c43120 ARUE_c43120 PF17137 ARUE_c43120 ARUE_c43130 PF00072 Response regulator receiver domain ARUE_c43130 PF00196 Bacterial regulatory proteins, luxR family ARUE_c43140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ARUE_c43140 PF07730 Histidine kinase ARUE_c43150 PF02687 ARUE_c43150 ARUE_c43160 PF00005 ABC transporter ARUE_c43170 PF01638 HxlR-like helix-turn-helix ARUE_c43180 PF13460 NADH(P)-binding ARUE_c43190 PF13450 NAD(P)-binding Rossmann-like domain ARUE_c43200 PF09594 ARUE_c43200 ARUE_c43210 PF00300 Histidine phosphatase superfamily (branch 1) ARUE_c43220 PF01743 Poly A polymerase head domain ARUE_c43220 PF01966 HD domain ARUE_c43220 PF12627 Probable RNA and SrmB- binding site of polymerase A ARUE_c43230 PF00293 NUDIX domain ARUE_c43240 PF03023 ARUE_c43240 ARUE_c43260 PF07992 Pyridine nucleotide-disulphide oxidoreductase ARUE_c43270 PF00085 Thioredoxin ARUE_c43320 PF02195 ParB-like nuclease domain ARUE_c43330 PF13614 AAA domain ARUE_c43340 PF02527 rRNA small subunit methyltransferase G ARUE_c43350 PF01424 R3H domain ARUE_c43360 PF02096 60Kd inner membrane protein ARUE_c43370 PF01809 ARUE_c43370