ATC04_00770 c2970305914aa8ee069a95a50a3bd1ed 308 SUPERFAMILY SSF52540 2 217 1.28E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_00770 c2970305914aa8ee069a95a50a3bd1ed 308 Pfam PF00005 ABC transporter 18 156 1.7E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_00770 c2970305914aa8ee069a95a50a3bd1ed 308 SMART SM00382 26 204 4.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_00770 c2970305914aa8ee069a95a50a3bd1ed 308 Gene3D G3DSA:3.40.50.300 1 229 1.6E-54 T 11-10-2018 ATC04_15245 a17c76306ceffae4886178ff06eb06da 409 Pfam PF00480 ROK family 94 395 9.2E-39 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ATC04_15245 a17c76306ceffae4886178ff06eb06da 409 Pfam PF13412 Winged helix-turn-helix DNA-binding 18 59 5.6E-8 T 11-10-2018 ATC04_15245 a17c76306ceffae4886178ff06eb06da 409 Gene3D G3DSA:3.30.420.40 94 390 1.0E-60 T 11-10-2018 ATC04_15245 a17c76306ceffae4886178ff06eb06da 409 Gene3D G3DSA:1.10.10.10 2 78 4.7E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_15245 a17c76306ceffae4886178ff06eb06da 409 SUPERFAMILY SSF46785 12 73 2.34E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_15245 a17c76306ceffae4886178ff06eb06da 409 SUPERFAMILY SSF53067 84 398 1.03E-43 T 11-10-2018 ATC04_15245 a17c76306ceffae4886178ff06eb06da 409 Gene3D G3DSA:3.30.420.40 208 381 1.0E-60 T 11-10-2018 ATC04_16435 58980de94dfc06b998a4559eff5ddd99 320 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 44 4.3E-17 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ATC04_16435 58980de94dfc06b998a4559eff5ddd99 320 PRINTS PR00987 Glutamyl-tRNA synthetase signature 188 198 4.3E-17 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ATC04_16435 58980de94dfc06b998a4559eff5ddd99 320 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 31 4.3E-17 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ATC04_16435 58980de94dfc06b998a4559eff5ddd99 320 PRINTS PR00987 Glutamyl-tRNA synthetase signature 48 61 4.3E-17 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ATC04_16435 58980de94dfc06b998a4559eff5ddd99 320 PRINTS PR00987 Glutamyl-tRNA synthetase signature 204 212 4.3E-17 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ATC04_16435 58980de94dfc06b998a4559eff5ddd99 320 SUPERFAMILY SSF52374 18 277 2.25E-78 T 11-10-2018 ATC04_16435 58980de94dfc06b998a4559eff5ddd99 320 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 16 309 37.617 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 ATC04_16435 58980de94dfc06b998a4559eff5ddd99 320 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 19 274 1.2E-52 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 ATC04_16435 58980de94dfc06b998a4559eff5ddd99 320 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 22 33 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_16435 58980de94dfc06b998a4559eff5ddd99 320 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 17 279 1.6E-90 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 ATC04_16435 58980de94dfc06b998a4559eff5ddd99 320 Gene3D G3DSA:3.40.50.620 12 311 8.9E-88 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_08450 fb2d87927043feafd9f4a1dcc733ac4a 447 TIGRFAM TIGR00115 tig: trigger factor 12 406 1.1E-105 T 11-10-2018 IPR005215 Trigger factor GO:0015031 ATC04_08450 fb2d87927043feafd9f4a1dcc733ac4a 447 SUPERFAMILY SSF102735 3 134 8.11E-34 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 ATC04_08450 fb2d87927043feafd9f4a1dcc733ac4a 447 Gene3D G3DSA:3.30.70.1050 1 121 1.2E-29 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 ATC04_08450 fb2d87927043feafd9f4a1dcc733ac4a 447 SUPERFAMILY SSF109998 249 424 2.06E-33 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily ATC04_08450 fb2d87927043feafd9f4a1dcc733ac4a 447 Gene3D G3DSA:1.10.3120.10 122 412 1.0E-59 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 ATC04_08450 fb2d87927043feafd9f4a1dcc733ac4a 447 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 261 408 7.0E-21 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 ATC04_08450 fb2d87927043feafd9f4a1dcc733ac4a 447 Pfam PF05697 Bacterial trigger factor protein (TF) 3 149 1.6E-40 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 ATC04_08450 fb2d87927043feafd9f4a1dcc733ac4a 447 PIRSF PIRSF003095 1 433 1.5E-101 T 11-10-2018 IPR005215 Trigger factor GO:0015031 ATC04_08450 fb2d87927043feafd9f4a1dcc733ac4a 447 SUPERFAMILY SSF54534 138 247 5.7E-19 T 11-10-2018 ATC04_08450 fb2d87927043feafd9f4a1dcc733ac4a 447 Gene3D G3DSA:3.10.50.40 156 246 1.0E-59 T 11-10-2018 ATC04_08450 fb2d87927043feafd9f4a1dcc733ac4a 447 Hamap MF_00303 Trigger factor [tig]. 1 413 17.55 T 11-10-2018 IPR005215 Trigger factor GO:0015031 ATC04_08450 fb2d87927043feafd9f4a1dcc733ac4a 447 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 218 2.3E-6 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ATC04_16145 4610df8003853d65bf6a3a661db05610 312 Gene3D G3DSA:3.40.800.10 1 311 6.3E-103 T 11-10-2018 ATC04_16145 4610df8003853d65bf6a3a661db05610 312 ProSitePatterns PS01053 Arginase family signature. 238 259 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 ATC04_16145 4610df8003853d65bf6a3a661db05610 312 PRINTS PR00116 Arginase signature 235 264 5.1E-5 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ATC04_16145 4610df8003853d65bf6a3a661db05610 312 PRINTS PR00116 Arginase signature 117 132 5.1E-5 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ATC04_16145 4610df8003853d65bf6a3a661db05610 312 PIRSF PIRSF036979 26 311 4.0E-28 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ATC04_16145 4610df8003853d65bf6a3a661db05610 312 Hamap MF_00737 Formimidoylglutamase [hutG]. 4 309 38.99 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 ATC04_16145 4610df8003853d65bf6a3a661db05610 312 TIGRFAM TIGR01227 hutG: formimidoylglutamase 3 308 2.4E-90 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 ATC04_16145 4610df8003853d65bf6a3a661db05610 312 SUPERFAMILY SSF52768 19 309 1.13E-74 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily ATC04_16145 4610df8003853d65bf6a3a661db05610 312 Pfam PF00491 Arginase family 38 308 3.4E-54 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ATC04_07990 f4f4039a1ca1e15f46216fce920be7ba 432 Gene3D G3DSA:3.40.630.30 24 159 3.8E-27 T 11-10-2018 ATC04_07990 f4f4039a1ca1e15f46216fce920be7ba 432 Hamap MF_01812 N-acetyltransferase Eis [eis]. 16 432 27.497 T 11-10-2018 IPR022902 N-acetyltransferase Eis ATC04_07990 f4f4039a1ca1e15f46216fce920be7ba 432 Gene3D G3DSA:3.30.1050.10 325 422 4.3E-27 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily ATC04_07990 f4f4039a1ca1e15f46216fce920be7ba 432 SUPERFAMILY SSF55729 79 326 8.13E-39 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_07990 f4f4039a1ca1e15f46216fce920be7ba 432 Pfam PF13527 Acetyltransferase (GNAT) domain 77 155 1.6E-18 T 11-10-2018 ATC04_07990 f4f4039a1ca1e15f46216fce920be7ba 432 Pfam PF13530 Sterol carrier protein domain 220 428 8.7E-43 T 11-10-2018 IPR025559 Enhanced intracellular survival protein domain ATC04_07990 f4f4039a1ca1e15f46216fce920be7ba 432 Gene3D G3DSA:3.40.630.30 162 319 2.9E-28 T 11-10-2018 ATC04_07990 f4f4039a1ca1e15f46216fce920be7ba 432 SUPERFAMILY SSF55718 327 430 2.59E-19 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily ATC04_01670 30292cd755062c338f7fa1b3588bbcd0 310 SUPERFAMILY SSF53850 90 302 1.72E-35 T 11-10-2018 ATC04_01670 30292cd755062c338f7fa1b3588bbcd0 310 SUPERFAMILY SSF46785 5 87 2.42E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_01670 30292cd755062c338f7fa1b3588bbcd0 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.1E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_01670 30292cd755062c338f7fa1b3588bbcd0 310 Gene3D G3DSA:1.10.10.10 3 90 7.6E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_01670 30292cd755062c338f7fa1b3588bbcd0 310 Pfam PF03466 LysR substrate binding domain 94 298 1.0E-37 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_01670 30292cd755062c338f7fa1b3588bbcd0 310 Gene3D G3DSA:3.40.190.10 170 272 4.8E-40 T 11-10-2018 ATC04_01670 30292cd755062c338f7fa1b3588bbcd0 310 Gene3D G3DSA:3.40.190.10 94 285 4.8E-40 T 11-10-2018 ATC04_10085 f19f16d92ee79e6323cf448306244ebe 382 Gene3D G3DSA:1.10.540.10 2 123 1.5E-31 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_10085 f19f16d92ee79e6323cf448306244ebe 382 SUPERFAMILY SSF56645 5 245 4.58E-69 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_10085 f19f16d92ee79e6323cf448306244ebe 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 2.2E-37 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_10085 f19f16d92ee79e6323cf448306244ebe 382 Gene3D G3DSA:1.20.140.10 241 382 1.9E-39 T 11-10-2018 ATC04_10085 f19f16d92ee79e6323cf448306244ebe 382 SUPERFAMILY SSF47203 232 382 1.93E-42 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_10085 f19f16d92ee79e6323cf448306244ebe 382 Gene3D G3DSA:2.40.110.10 125 240 2.5E-36 T 11-10-2018 ATC04_10085 f19f16d92ee79e6323cf448306244ebe 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 120 2.9E-28 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_10085 f19f16d92ee79e6323cf448306244ebe 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 222 7.5E-21 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_06770 018d15c70f8742c1b9211615ddff279c 169 Pfam PF12840 Helix-turn-helix domain 9 66 1.6E-10 T 11-10-2018 ATC04_06770 018d15c70f8742c1b9211615ddff279c 169 SMART SM00418 9 97 4.3E-4 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_06770 018d15c70f8742c1b9211615ddff279c 169 Gene3D G3DSA:1.10.10.10 3 82 5.1E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_06770 018d15c70f8742c1b9211615ddff279c 169 SUPERFAMILY SSF46785 11 84 3.93E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_05105 333449aeb6a6826afc93dcaf5f2f2201 225 SMART SM00100 11 129 1.7E-27 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain ATC04_05105 333449aeb6a6826afc93dcaf5f2f2201 225 Pfam PF13545 Crp-like helix-turn-helix domain 149 222 1.3E-17 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ATC04_05105 333449aeb6a6826afc93dcaf5f2f2201 225 SMART SM00419 168 216 2.0E-13 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ATC04_05105 333449aeb6a6826afc93dcaf5f2f2201 225 SUPERFAMILY SSF46785 146 223 6.81E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_05105 333449aeb6a6826afc93dcaf5f2f2201 225 Gene3D G3DSA:1.10.10.10 148 225 4.8E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_05105 333449aeb6a6826afc93dcaf5f2f2201 225 PRINTS PR00103 cAMP-dependent protein kinase signature 32 46 1.3E-5 T 11-10-2018 ATC04_05105 333449aeb6a6826afc93dcaf5f2f2201 225 PRINTS PR00103 cAMP-dependent protein kinase signature 77 86 1.3E-5 T 11-10-2018 ATC04_05105 333449aeb6a6826afc93dcaf5f2f2201 225 PRINTS PR00103 cAMP-dependent protein kinase signature 89 100 1.3E-5 T 11-10-2018 ATC04_05105 333449aeb6a6826afc93dcaf5f2f2201 225 Gene3D G3DSA:2.60.120.10 2 147 2.3E-48 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_05105 333449aeb6a6826afc93dcaf5f2f2201 225 SUPERFAMILY SSF51206 5 143 2.75E-38 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like ATC04_05105 333449aeb6a6826afc93dcaf5f2f2201 225 Pfam PF00027 Cyclic nucleotide-binding domain 30 114 3.8E-25 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain ATC04_13270 e3f38bda8470ccd8c2d5726b66be7f8b 445 SUPERFAMILY SSF52777 208 441 4.89E-68 T 11-10-2018 ATC04_13270 e3f38bda8470ccd8c2d5726b66be7f8b 445 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 215 440 4.7E-69 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ATC04_13270 e3f38bda8470ccd8c2d5726b66be7f8b 445 Gene3D G3DSA:3.30.559.10 201 442 4.4E-71 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ATC04_13270 e3f38bda8470ccd8c2d5726b66be7f8b 445 SUPERFAMILY SSF47005 153 193 3.92E-10 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ATC04_13270 e3f38bda8470ccd8c2d5726b66be7f8b 445 SUPERFAMILY SSF51230 3 94 5.23E-24 T 11-10-2018 IPR011053 Single hybrid motif ATC04_13270 e3f38bda8470ccd8c2d5726b66be7f8b 445 Pfam PF02817 e3 binding domain 156 189 2.9E-12 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ATC04_13270 e3f38bda8470ccd8c2d5726b66be7f8b 445 Gene3D G3DSA:2.40.50.100 1 97 2.6E-22 T 11-10-2018 ATC04_13270 e3f38bda8470ccd8c2d5726b66be7f8b 445 Pfam PF00364 Biotin-requiring enzyme 5 76 2.5E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ATC04_13270 e3f38bda8470ccd8c2d5726b66be7f8b 445 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ATC04_13270 e3f38bda8470ccd8c2d5726b66be7f8b 445 Gene3D G3DSA:4.10.320.10 148 200 4.9E-14 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ATC04_17370 211d6586a19eef0fa82900234e146dba 534 SUPERFAMILY SSF52540 346 510 5.86E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_17370 211d6586a19eef0fa82900234e146dba 534 Pfam PF00005 ABC transporter 357 478 1.7E-15 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_17370 211d6586a19eef0fa82900234e146dba 534 Gene3D G3DSA:3.40.50.300 338 525 9.1E-37 T 11-10-2018 ATC04_17370 211d6586a19eef0fa82900234e146dba 534 Gene3D G3DSA:3.40.50.300 6 275 3.0E-47 T 11-10-2018 ATC04_17370 211d6586a19eef0fa82900234e146dba 534 SMART SM00382 31 332 3.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_17370 211d6586a19eef0fa82900234e146dba 534 SMART SM00382 355 524 1.4E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_17370 211d6586a19eef0fa82900234e146dba 534 SUPERFAMILY SSF52540 7 223 2.1E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_17370 211d6586a19eef0fa82900234e146dba 534 Pfam PF00005 ABC transporter 35 172 5.1E-15 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_09485 b1b47b005fb9679645dfb22312e71681 354 Pfam PF01180 Dihydroorotate dehydrogenase 50 354 2.8E-90 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 ATC04_09485 b1b47b005fb9679645dfb22312e71681 354 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 8 354 8.1E-119 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATC04_09485 b1b47b005fb9679645dfb22312e71681 354 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 306 326 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 ATC04_09485 b1b47b005fb9679645dfb22312e71681 354 Gene3D G3DSA:3.20.20.70 3 354 1.7E-119 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_09485 b1b47b005fb9679645dfb22312e71681 354 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 85 104 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 ATC04_09485 b1b47b005fb9679645dfb22312e71681 354 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 3 350 45.117 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATC04_09485 b1b47b005fb9679645dfb22312e71681 354 PIRSF PIRSF000164 20 354 2.5E-98 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 ATC04_09485 b1b47b005fb9679645dfb22312e71681 354 SUPERFAMILY SSF51395 4 353 7.94E-96 T 11-10-2018 ATC04_09235 1996ca196f51208a194dca756068e062 363 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 19 351 7.4E-109 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ATC04_09235 1996ca196f51208a194dca756068e062 363 Gene3D G3DSA:3.40.50.1970 4 176 2.3E-55 T 11-10-2018 ATC04_09235 1996ca196f51208a194dca756068e062 363 Pfam PF01761 3-dehydroquinate synthase 72 327 7.8E-94 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ATC04_09235 1996ca196f51208a194dca756068e062 363 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 7 363 62.217 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ATC04_09235 1996ca196f51208a194dca756068e062 363 SUPERFAMILY SSF56796 13 359 9.55E-101 T 11-10-2018 ATC04_09235 1996ca196f51208a194dca756068e062 363 PIRSF PIRSF001455 13 362 2.4E-100 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ATC04_09235 1996ca196f51208a194dca756068e062 363 Gene3D G3DSA:1.20.1090.10 177 363 1.9E-64 T 11-10-2018 ATC04_10280 785f03db65e7ee17447916f33d086f4b 914 SUPERFAMILY SSF52922 724 903 1.43E-54 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ATC04_10280 785f03db65e7ee17447916f33d086f4b 914 Gene3D G3DSA:3.40.50.970 489 726 8.8E-103 T 11-10-2018 ATC04_10280 785f03db65e7ee17447916f33d086f4b 914 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 19 902 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ATC04_10280 785f03db65e7ee17447916f33d086f4b 914 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 143 318 1.6E-11 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATC04_10280 785f03db65e7ee17447916f33d086f4b 914 Gene3D G3DSA:3.40.50.920 728 905 4.0E-63 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ATC04_10280 785f03db65e7ee17447916f33d086f4b 914 SUPERFAMILY SSF52518 491 721 6.08E-86 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_10280 785f03db65e7ee17447916f33d086f4b 914 Gene3D G3DSA:3.40.50.970 68 488 7.0E-135 T 11-10-2018 ATC04_10280 785f03db65e7ee17447916f33d086f4b 914 SUPERFAMILY SSF52518 69 485 2.36E-132 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_10280 785f03db65e7ee17447916f33d086f4b 914 PIRSF PIRSF000156 9 908 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ATC04_11035 692865d030f4c96c6af05bfe5b6b2040 343 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 7.1E-61 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ATC04_11035 692865d030f4c96c6af05bfe5b6b2040 343 Gene3D G3DSA:3.40.50.720 1 182 1.2E-76 T 11-10-2018 ATC04_11035 692865d030f4c96c6af05bfe5b6b2040 343 SUPERFAMILY SSF48179 184 330 2.21E-65 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_11035 692865d030f4c96c6af05bfe5b6b2040 343 SUPERFAMILY SSF51735 3 183 2.38E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_11035 692865d030f4c96c6af05bfe5b6b2040 343 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 178 1.1E-75 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ATC04_11035 692865d030f4c96c6af05bfe5b6b2040 343 Gene3D G3DSA:1.10.3730.40 183 338 6.6E-67 T 11-10-2018 ATC04_11035 692865d030f4c96c6af05bfe5b6b2040 343 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 329 44.222 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ATC04_11035 692865d030f4c96c6af05bfe5b6b2040 343 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 327 4.9E-125 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ATC04_11035 692865d030f4c96c6af05bfe5b6b2040 343 PIRSF PIRSF000116 203 332 3.6E-13 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ATC04_11035 692865d030f4c96c6af05bfe5b6b2040 343 PIRSF PIRSF000116 5 209 3.6E-40 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ATC04_03195 de31a962402dd886be75fb16026533fc 495 Gene3D G3DSA:3.50.50.60 109 253 4.2E-65 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03195 de31a962402dd886be75fb16026533fc 495 Gene3D G3DSA:3.50.50.60 6 290 4.2E-65 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03195 de31a962402dd886be75fb16026533fc 495 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 5.5E-5 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_03195 de31a962402dd886be75fb16026533fc 495 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 5.5E-5 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_03195 de31a962402dd886be75fb16026533fc 495 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 151 175 5.5E-5 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_03195 de31a962402dd886be75fb16026533fc 495 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 243 264 5.5E-5 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_03195 de31a962402dd886be75fb16026533fc 495 Pfam PF04324 BFD-like [2Fe-2S] binding domain 444 489 7.0E-11 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain ATC04_03195 de31a962402dd886be75fb16026533fc 495 SUPERFAMILY SSF51905 153 318 4.66E-24 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03195 de31a962402dd886be75fb16026533fc 495 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 289 2.6E-40 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_03195 de31a962402dd886be75fb16026533fc 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 8.2E-17 T 11-10-2018 ATC04_03195 de31a962402dd886be75fb16026533fc 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 8.2E-17 T 11-10-2018 ATC04_03195 de31a962402dd886be75fb16026533fc 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 8.2E-17 T 11-10-2018 ATC04_03195 de31a962402dd886be75fb16026533fc 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 8.2E-17 T 11-10-2018 ATC04_03195 de31a962402dd886be75fb16026533fc 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 8.2E-17 T 11-10-2018 ATC04_03195 de31a962402dd886be75fb16026533fc 495 Gene3D G3DSA:1.10.10.1100 443 492 7.2E-10 T 11-10-2018 ATC04_03195 de31a962402dd886be75fb16026533fc 495 SUPERFAMILY SSF51905 3 197 4.53E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03730 e914774be0e241a71d870a9435a455b2 219 Gene3D G3DSA:3.30.70.1450 139 215 3.4E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ATC04_03730 e914774be0e241a71d870a9435a455b2 219 Pfam PF02080 TrkA-C domain 158 214 6.9E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ATC04_03730 e914774be0e241a71d870a9435a455b2 219 SUPERFAMILY SSF51735 6 135 1.71E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_03730 e914774be0e241a71d870a9435a455b2 219 Gene3D G3DSA:3.40.50.720 2 138 1.5E-31 T 11-10-2018 ATC04_03730 e914774be0e241a71d870a9435a455b2 219 Pfam PF02254 TrkA-N domain 7 122 1.1E-23 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ATC04_03730 e914774be0e241a71d870a9435a455b2 219 SUPERFAMILY SSF116726 132 216 3.27E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 Hamap MF_00123 Arginine--tRNA ligase [argS]. 8 547 23.897 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 Gene3D G3DSA:1.10.730.10 420 547 1.7E-136 T 11-10-2018 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 SUPERFAMILY SSF47323 419 547 8.5E-32 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 PRINTS PR01038 Arginyl-tRNA synthetase signature 121 136 2.5E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 PRINTS PR01038 Arginyl-tRNA synthetase signature 136 152 2.5E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 PRINTS PR01038 Arginyl-tRNA synthetase signature 297 318 2.5E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 PRINTS PR01038 Arginyl-tRNA synthetase signature 160 173 2.5E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 SUPERFAMILY SSF55190 15 112 9.68E-19 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 SMART SM00836 425 547 4.0E-44 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 9 547 3.9E-112 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 Pfam PF00750 tRNA synthetases class I (R) 120 177 2.8E-6 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 Pfam PF00750 tRNA synthetases class I (R) 233 386 9.2E-8 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 SMART SM01016 4 92 1.1E-30 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 SUPERFAMILY SSF52374 119 433 1.21E-77 T 11-10-2018 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 131 140 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 92 1.3E-18 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 Gene3D G3DSA:3.30.1360.70 3 110 4.2E-21 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 Pfam PF05746 DALR anticodon binding domain 425 547 5.0E-32 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ATC04_11865 92833d6583c4a3877f4d52a871b0ae0e 547 Gene3D G3DSA:3.40.50.620 122 419 1.7E-136 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_01615 972d5b100a599b3b0c7f469cdd091e68 313 Pfam PF00701 Dihydrodipicolinate synthetase family 9 305 7.3E-49 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_01615 972d5b100a599b3b0c7f469cdd091e68 313 PRINTS PR00146 Dihydrodipicolinate synthase signature 42 63 6.2E-12 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_01615 972d5b100a599b3b0c7f469cdd091e68 313 PRINTS PR00146 Dihydrodipicolinate synthase signature 78 96 6.2E-12 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_01615 972d5b100a599b3b0c7f469cdd091e68 313 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 6.2E-12 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_01615 972d5b100a599b3b0c7f469cdd091e68 313 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 6.2E-12 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_01615 972d5b100a599b3b0c7f469cdd091e68 313 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 170 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 ATC04_01615 972d5b100a599b3b0c7f469cdd091e68 313 PIRSF PIRSF001365 5 313 1.3E-75 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_01615 972d5b100a599b3b0c7f469cdd091e68 313 SUPERFAMILY SSF51569 7 310 2.93E-75 T 11-10-2018 ATC04_01615 972d5b100a599b3b0c7f469cdd091e68 313 SMART SM01130 8 308 8.4E-80 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_01615 972d5b100a599b3b0c7f469cdd091e68 313 Gene3D G3DSA:3.20.20.70 5 310 6.6E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_03930 a43805ce42afb7a95801a261ba218966 112 Gene3D G3DSA:3.30.70.100 1 94 2.1E-14 T 11-10-2018 ATC04_03930 a43805ce42afb7a95801a261ba218966 112 Pfam PF05336 L-rhamnose mutarotase 4 98 1.2E-15 T 11-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 ATC04_03930 a43805ce42afb7a95801a261ba218966 112 SUPERFAMILY SSF54909 1 102 1.58E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 Gene3D G3DSA:3.40.50.300 422 603 3.2E-50 T 11-10-2018 ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 SUPERFAMILY SSF52540 338 565 8.07E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 Pfam PF04851 Type III restriction enzyme, res subunit 22 122 6.6E-10 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 Gene3D G3DSA:3.40.50.300 5 251 3.1E-72 T 11-10-2018 ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 SMART SM00490 467 553 1.3E-18 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 Pfam PF12344 Ultra-violet resistance protein B 559 600 2.3E-20 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 SUPERFAMILY SSF46600 646 688 4.32E-9 T 11-10-2018 IPR036876 UVR domain superfamily ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 14 683 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 SMART SM00487 18 433 2.0E-23 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 Pfam PF02151 UvrB/uvrC motif 652 685 1.6E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 Gene3D G3DSA:3.40.50.300 279 421 3.8E-55 T 11-10-2018 ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 Pfam PF00271 Helicase conserved C-terminal domain 441 551 3.6E-17 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 Hamap MF_00204 UvrABC system protein B [uvrB]. 12 685 42.533 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 ATC04_08060 3d1a1da41b71f06620c003f144db6cc5 695 SUPERFAMILY SSF52540 13 422 1.28E-133 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03685 bc85654866dce49d6e49140909a1b15d 147 SMART SM00347 34 129 5.2E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_03685 bc85654866dce49d6e49140909a1b15d 147 SUPERFAMILY SSF46785 11 145 1.69E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03685 bc85654866dce49d6e49140909a1b15d 147 Gene3D G3DSA:1.10.10.10 2 145 9.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03685 bc85654866dce49d6e49140909a1b15d 147 Pfam PF12802 MarR family 41 93 1.0E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_03685 bc85654866dce49d6e49140909a1b15d 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 4.9E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_03685 bc85654866dce49d6e49140909a1b15d 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 4.9E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_03685 bc85654866dce49d6e49140909a1b15d 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 4.9E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_03685 bc85654866dce49d6e49140909a1b15d 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 4.9E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_03425 af6ec163a2cc1ccc2ce925ee829bceb0 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 258 6.6E-5 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_03425 af6ec163a2cc1ccc2ce925ee829bceb0 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 508 536 6.7E-5 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_03425 af6ec163a2cc1ccc2ce925ee829bceb0 536 SMART SM00382 313 506 2.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_03425 af6ec163a2cc1ccc2ce925ee829bceb0 536 SMART SM00382 34 230 6.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_03425 af6ec163a2cc1ccc2ce925ee829bceb0 536 SUPERFAMILY SSF52540 289 528 2.31E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03425 af6ec163a2cc1ccc2ce925ee829bceb0 536 Pfam PF00005 ABC transporter 26 181 2.2E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_03425 af6ec163a2cc1ccc2ce925ee829bceb0 536 SUPERFAMILY SSF52540 7 259 5.92E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03425 af6ec163a2cc1ccc2ce925ee829bceb0 536 ProSitePatterns PS00211 ABC transporters family signature. 429 443 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_03425 af6ec163a2cc1ccc2ce925ee829bceb0 536 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_03425 af6ec163a2cc1ccc2ce925ee829bceb0 536 Gene3D G3DSA:3.40.50.300 286 536 8.9E-79 T 11-10-2018 ATC04_03425 af6ec163a2cc1ccc2ce925ee829bceb0 536 Gene3D G3DSA:3.40.50.300 7 285 2.8E-73 T 11-10-2018 ATC04_03425 af6ec163a2cc1ccc2ce925ee829bceb0 536 Pfam PF00005 ABC transporter 305 456 2.7E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_08270 a066dc23460a6e23a69da29cc9dedb02 115 SUPERFAMILY SSF46785 9 111 1.91E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_08270 a066dc23460a6e23a69da29cc9dedb02 115 Gene3D G3DSA:1.10.10.10 4 112 5.8E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_08270 a066dc23460a6e23a69da29cc9dedb02 115 Pfam PF03551 Transcriptional regulator PadR-like family 21 91 8.3E-22 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal ATC04_15730 893428a2be97be65bd0649292836b8cd 477 SUPERFAMILY SSF53738 289 384 1.33E-25 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 2.2E-22 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 220 233 2.2E-22 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 181 200 2.2E-22 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 249 264 2.2E-22 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 393 470 1.1E-11 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 165 269 7.2E-24 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 Gene3D G3DSA:3.30.310.50 390 472 2.6E-18 T 11-10-2018 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 Gene3D G3DSA:3.40.120.10 266 386 2.7E-29 T 11-10-2018 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 12 129 6.8E-31 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 SUPERFAMILY SSF53738 11 176 8.24E-32 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 SUPERFAMILY SSF53738 164 269 4.71E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 286 385 1.1E-22 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 Gene3D G3DSA:3.40.120.10 183 265 1.6E-31 T 11-10-2018 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 SUPERFAMILY SSF55957 387 473 1.83E-17 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_15730 893428a2be97be65bd0649292836b8cd 477 Gene3D G3DSA:3.40.120.10 10 151 3.6E-40 T 11-10-2018 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 PIRSF PIRSF000497 3 400 4.5E-163 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 10 397 8.1E-167 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 131 141 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 7 399 54.642 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 SUPERFAMILY SSF55973 249 399 1.49E-67 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 SUPERFAMILY SSF55973 9 114 2.32E-43 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 249 388 1.0E-66 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 SUPERFAMILY SSF55973 128 248 3.61E-42 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 10 105 9.3E-41 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 Gene3D G3DSA:3.30.300.10 16 286 6.5E-165 T 11-10-2018 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 275 283 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 Gene3D G3DSA:3.30.300.10 10 249 6.5E-165 T 11-10-2018 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 Gene3D G3DSA:3.30.300.10 107 390 6.5E-165 T 11-10-2018 ATC04_09310 67d494aadb9564b2bc768338eebe8d4e 401 Pfam PF02772 S-adenosylmethionine synthetase, central domain 130 247 1.9E-40 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATC04_14040 c7a875c1ee64a2d5cefe8a16427a4507 326 SUPERFAMILY SSF53271 77 314 2.38E-59 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ATC04_14040 c7a875c1ee64a2d5cefe8a16427a4507 326 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 136 151 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 ATC04_14040 c7a875c1ee64a2d5cefe8a16427a4507 326 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 12 323 44.782 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 ATC04_14040 c7a875c1ee64a2d5cefe8a16427a4507 326 SMART SM01400 12 128 1.5E-64 T 11-10-2018 ATC04_14040 c7a875c1ee64a2d5cefe8a16427a4507 326 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 13 128 1.5E-42 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ATC04_14040 c7a875c1ee64a2d5cefe8a16427a4507 326 Gene3D G3DSA:3.40.50.2020 16 310 2.4E-111 T 11-10-2018 ATC04_14040 c7a875c1ee64a2d5cefe8a16427a4507 326 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 14 323 4.0E-113 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ATC04_14040 c7a875c1ee64a2d5cefe8a16427a4507 326 Pfam PF14572 Phosphoribosyl synthetase-associated domain 211 322 3.6E-22 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ATC04_14040 c7a875c1ee64a2d5cefe8a16427a4507 326 Gene3D G3DSA:3.40.50.2020 155 299 2.4E-111 T 11-10-2018 ATC04_02175 a952c53bd2d62d21987f5f652a55f952 561 Gene3D G3DSA:3.10.410.10 448 537 1.4E-33 T 11-10-2018 ATC04_02175 a952c53bd2d62d21987f5f652a55f952 561 Pfam PF01268 Formate--tetrahydrofolate ligase 9 560 7.7E-257 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 ATC04_02175 a952c53bd2d62d21987f5f652a55f952 561 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 8 561 46.569 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 ATC04_02175 a952c53bd2d62d21987f5f652a55f952 561 Gene3D G3DSA:3.40.50.300 14 443 4.1E-192 T 11-10-2018 ATC04_02175 a952c53bd2d62d21987f5f652a55f952 561 Gene3D G3DSA:3.30.1510.10 135 253 4.1E-192 T 11-10-2018 ATC04_02175 a952c53bd2d62d21987f5f652a55f952 561 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 109 119 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 ATC04_02175 a952c53bd2d62d21987f5f652a55f952 561 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 334 345 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 ATC04_02175 a952c53bd2d62d21987f5f652a55f952 561 SUPERFAMILY SSF52540 11 559 8.41E-230 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03600 8d21b421233dae406ad23f1b384a1e69 286 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 74 279 6.5E-63 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ATC04_03600 8d21b421233dae406ad23f1b384a1e69 286 Gene3D G3DSA:3.90.850.10 63 284 1.2E-73 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_03600 8d21b421233dae406ad23f1b384a1e69 286 SUPERFAMILY SSF56529 63 280 2.49E-73 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 Gene3D G3DSA:3.30.70.260 673 753 6.2E-15 T 11-10-2018 ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 Pfam PF13328 HD domain 56 203 8.8E-46 T 11-10-2018 IPR003607 HD/PDEase domain ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 SUPERFAMILY SSF81301 208 421 4.9E-62 T 11-10-2018 ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 SMART SM00954 263 373 8.7E-61 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 Gene3D G3DSA:3.30.460.10 221 353 3.1E-48 T 11-10-2018 ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 Pfam PF04607 Region found in RelA / SpoT proteins 263 373 2.3E-37 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 Gene3D G3DSA:3.10.20.30 411 482 7.5E-30 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 Pfam PF02824 TGS domain 417 476 3.7E-22 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 SUPERFAMILY SSF55021 671 749 3.71E-13 T 11-10-2018 ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 SMART SM00471 71 181 2.5E-11 T 11-10-2018 IPR003607 HD/PDEase domain ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 SUPERFAMILY SSF81271 408 476 2.62E-20 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 Pfam PF13291 ACT domain 671 748 8.4E-16 T 11-10-2018 IPR002912 ACT domain ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 SUPERFAMILY SSF109604 33 219 3.14E-69 T 11-10-2018 ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 56 748 4.5E-247 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 ATC04_09145 16140337ca0479aa602c0611e9c9a1b7 755 Gene3D G3DSA:1.10.3210.10 29 218 5.7E-75 T 11-10-2018 ATC04_09700 4ff7749b854e7500093bc4e98f3a66fe 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 20 202 1.7E-21 T 11-10-2018 ATC04_09700 4ff7749b854e7500093bc4e98f3a66fe 237 Gene3D G3DSA:3.40.50.1000 20 207 2.4E-45 T 11-10-2018 IPR023214 HAD superfamily ATC04_09700 4ff7749b854e7500093bc4e98f3a66fe 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 203 3.6E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ATC04_09700 4ff7749b854e7500093bc4e98f3a66fe 237 SUPERFAMILY SSF56784 19 206 4.69E-41 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_09700 4ff7749b854e7500093bc4e98f3a66fe 237 Gene3D G3DSA:1.10.150.240 30 98 2.4E-45 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ATC04_00560 70889e9c06209ab7d4d7596eba2c3e5f 84 Hamap MF_00631 Cell division protein CrgA [crgA]. 1 84 25.468 T 11-10-2018 IPR009619 Cell division protein CrgA ATC04_00560 70889e9c06209ab7d4d7596eba2c3e5f 84 Pfam PF06781 Cell division protein CrgA 2 84 5.9E-30 T 11-10-2018 IPR009619 Cell division protein CrgA ATC04_18065 15bbce40b5b08da809ca79728fb1ee01 225 Gene3D G3DSA:3.40.50.2300 1 122 1.6E-35 T 11-10-2018 ATC04_18065 15bbce40b5b08da809ca79728fb1ee01 225 SUPERFAMILY SSF52172 1 172 2.7E-39 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_18065 15bbce40b5b08da809ca79728fb1ee01 225 SMART SM00862 146 222 5.6E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_18065 15bbce40b5b08da809ca79728fb1ee01 225 SMART SM00448 1 111 1.2E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_18065 15bbce40b5b08da809ca79728fb1ee01 225 Gene3D G3DSA:1.10.10.10 123 223 5.2E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_18065 15bbce40b5b08da809ca79728fb1ee01 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 222 6.9E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_18065 15bbce40b5b08da809ca79728fb1ee01 225 Pfam PF00072 Response regulator receiver domain 3 111 6.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_05235 1ed4e4c80c5ebcaee2734d990558165f 223 SUPERFAMILY SSF116726 137 220 1.57E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ATC04_05235 1ed4e4c80c5ebcaee2734d990558165f 223 Gene3D G3DSA:3.30.70.1450 144 221 1.3E-15 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ATC04_05235 1ed4e4c80c5ebcaee2734d990558165f 223 Gene3D G3DSA:3.40.50.720 7 143 7.2E-29 T 11-10-2018 ATC04_05235 1ed4e4c80c5ebcaee2734d990558165f 223 SUPERFAMILY SSF51735 12 139 2.81E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_05235 1ed4e4c80c5ebcaee2734d990558165f 223 Pfam PF02254 TrkA-N domain 12 127 1.5E-22 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ATC04_12780 b01b113445a196661ec333a76ca3d859 559 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 24 43 3.5E-5 T 11-10-2018 ATC04_12780 b01b113445a196661ec333a76ca3d859 559 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 199 217 3.5E-5 T 11-10-2018 ATC04_12780 b01b113445a196661ec333a76ca3d859 559 SUPERFAMILY SSF51905 22 542 6.33E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_12780 b01b113445a196661ec333a76ca3d859 559 Gene3D G3DSA:3.50.50.60 22 537 6.8E-150 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_12780 b01b113445a196661ec333a76ca3d859 559 SUPERFAMILY SSF56425 305 479 8.37E-32 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_12780 b01b113445a196661ec333a76ca3d859 559 Pfam PF00890 FAD binding domain 23 526 3.9E-70 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_12780 b01b113445a196661ec333a76ca3d859 559 Gene3D G3DSA:3.90.700.10 331 474 6.8E-150 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_12780 b01b113445a196661ec333a76ca3d859 559 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 535 550 2.2E-7 T 11-10-2018 ATC04_12780 b01b113445a196661ec333a76ca3d859 559 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 23 45 2.2E-7 T 11-10-2018 ATC04_14955 1638d85037ca28769772d9eae0d445d2 1002 Gene3D G3DSA:2.70.98.30 718 897 1.6E-12 T 11-10-2018 ATC04_14955 1638d85037ca28769772d9eae0d445d2 1002 Pfam PF09261 Alpha mannosidase middle domain 518 596 4.6E-24 T 11-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 ATC04_14955 1638d85037ca28769772d9eae0d445d2 1002 Gene3D G3DSA:1.20.1270.50 521 617 6.2E-28 T 11-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 ATC04_14955 1638d85037ca28769772d9eae0d445d2 1002 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 651 998 5.0E-54 T 11-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 ATC04_14955 1638d85037ca28769772d9eae0d445d2 1002 Gene3D G3DSA:3.20.110.10 247 518 1.1E-56 T 11-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily ATC04_14955 1638d85037ca28769772d9eae0d445d2 1002 SUPERFAMILY SSF88688 517 619 1.96E-26 T 11-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily ATC04_14955 1638d85037ca28769772d9eae0d445d2 1002 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 254 504 8.0E-83 T 11-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 ATC04_14955 1638d85037ca28769772d9eae0d445d2 1002 SMART SM00872 518 596 4.8E-35 T 11-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 ATC04_14955 1638d85037ca28769772d9eae0d445d2 1002 SUPERFAMILY SSF74650 659 1001 2.48E-58 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ATC04_14955 1638d85037ca28769772d9eae0d445d2 1002 SUPERFAMILY SSF88713 247 516 2.13E-79 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ATC04_01895 93eebc0a7f62544b90517ad4f31c75db 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 277 9.8E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_01895 93eebc0a7f62544b90517ad4f31c75db 286 SUPERFAMILY SSF161098 19 286 2.62E-58 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_01895 93eebc0a7f62544b90517ad4f31c75db 286 Gene3D G3DSA:1.10.3720.10 13 274 2.2E-52 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_14915 fef08878b72d07fa06cde5353c36fd42 501 Pfam PF13520 Amino acid permease 27 456 4.0E-50 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_14915 fef08878b72d07fa06cde5353c36fd42 501 PIRSF PIRSF006060 10 490 7.5E-65 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_14915 fef08878b72d07fa06cde5353c36fd42 501 Gene3D G3DSA:1.20.1740.10 22 483 1.0E-45 T 11-10-2018 ATC04_07790 6855284857527510ec3a1453634bf596 72 Pfam PF14013 MT0933-like antitoxin protein 17 62 7.9E-19 T 11-10-2018 IPR028037 Antitoxin Rv0909/MT0933 ATC04_00455 5ba4bc32258b39c142ddaaace4fea478 264 Gene3D G3DSA:3.40.50.1000 3 260 7.5E-60 T 11-10-2018 IPR023214 HAD superfamily ATC04_00455 5ba4bc32258b39c142ddaaace4fea478 264 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 259 2.5E-52 T 11-10-2018 ATC04_00455 5ba4bc32258b39c142ddaaace4fea478 264 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 232 5.8E-20 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ATC04_00455 5ba4bc32258b39c142ddaaace4fea478 264 SUPERFAMILY SSF56784 1 263 8.4E-60 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_00455 5ba4bc32258b39c142ddaaace4fea478 264 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 11-10-2018 ATC04_00455 5ba4bc32258b39c142ddaaace4fea478 264 Gene3D G3DSA:3.30.1240.10 83 188 7.5E-60 T 11-10-2018 ATC04_00455 5ba4bc32258b39c142ddaaace4fea478 264 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 259 4.3E-43 T 11-10-2018 IPR000150 Cof family GO:0016787 ATC04_16195 99e9baa922f676ced4e8031ae4fa0eef 179 SUPERFAMILY SSF55811 57 155 2.8E-6 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_16195 99e9baa922f676ced4e8031ae4fa0eef 179 Pfam PF16262 Domain of unknown function (DUF4916) 9 177 1.9E-81 T 11-10-2018 IPR032582 Protein of unknown function DUF4916 ATC04_16195 99e9baa922f676ced4e8031ae4fa0eef 179 Gene3D G3DSA:3.90.79.10 22 179 1.7E-42 T 11-10-2018 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 Gene3D G3DSA:3.90.740.10 245 437 5.9E-261 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 21 599 6.8E-249 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 SUPERFAMILY SSF50677 243 437 7.19E-48 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 Pfam PF09334 tRNA synthetases class I (M) 57 198 4.9E-22 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 20 837 21.66 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 Gene3D G3DSA:1.10.730.10 623 774 2.3E-30 T 11-10-2018 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 Pfam PF08264 Anticodon-binding domain of tRNA 676 796 2.1E-10 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 PRINTS PR00985 Leucyl-tRNA synthetase signature 169 185 1.2E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 PRINTS PR00985 Leucyl-tRNA synthetase signature 232 251 1.2E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 PRINTS PR00985 Leucyl-tRNA synthetase signature 513 531 1.2E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 PRINTS PR00985 Leucyl-tRNA synthetase signature 201 214 1.2E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 PRINTS PR00985 Leucyl-tRNA synthetase signature 585 595 1.2E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 PRINTS PR00985 Leucyl-tRNA synthetase signature 143 160 1.2E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 PRINTS PR00985 Leucyl-tRNA synthetase signature 552 574 1.2E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 SUPERFAMILY SSF52374 21 642 1.27E-141 T 11-10-2018 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 238 424 9.5E-64 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 Gene3D G3DSA:3.10.20.590 777 837 4.9E-16 T 11-10-2018 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 SUPERFAMILY SSF47323 649 836 7.1E-26 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 440 642 4.3E-17 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_09365 0894d39eddc6d2d87a17232856829914 839 Gene3D G3DSA:3.40.50.620 51 599 5.9E-261 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 SUPERFAMILY SSF50249 209 292 3.07E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 SUPERFAMILY SSF50249 110 194 7.24E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 SMART SM00316 124 191 1.0E-11 T 11-10-2018 IPR022967 RNA-binding domain, S1 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 SMART SM00316 37 108 9.6E-15 T 11-10-2018 IPR022967 RNA-binding domain, S1 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 SMART SM00316 295 366 4.3E-24 T 11-10-2018 IPR022967 RNA-binding domain, S1 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 SMART SM00316 210 280 1.9E-27 T 11-10-2018 IPR022967 RNA-binding domain, S1 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 Gene3D G3DSA:2.40.50.140 287 370 3.8E-28 T 11-10-2018 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 Gene3D G3DSA:2.40.50.140 207 286 5.9E-30 T 11-10-2018 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 PRINTS PR00681 Ribosomal protein S1 signature 175 195 1.0E-85 T 11-10-2018 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 PRINTS PR00681 Ribosomal protein S1 signature 310 329 1.0E-85 T 11-10-2018 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 PRINTS PR00681 Ribosomal protein S1 signature 129 145 1.0E-85 T 11-10-2018 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 PRINTS PR00681 Ribosomal protein S1 signature 57 71 1.0E-85 T 11-10-2018 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 PRINTS PR00681 Ribosomal protein S1 signature 105 124 1.0E-85 T 11-10-2018 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 PRINTS PR00681 Ribosomal protein S1 signature 232 253 1.0E-85 T 11-10-2018 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 PRINTS PR00681 Ribosomal protein S1 signature 349 367 1.0E-85 T 11-10-2018 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 PRINTS PR00681 Ribosomal protein S1 signature 39 57 1.0E-85 T 11-10-2018 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 PRINTS PR00681 Ribosomal protein S1 signature 146 163 1.0E-85 T 11-10-2018 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 Gene3D G3DSA:2.40.50.140 27 120 3.2E-22 T 11-10-2018 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 Gene3D G3DSA:2.40.50.140 121 203 1.6E-11 T 11-10-2018 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 SUPERFAMILY SSF50249 280 368 1.99E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 Pfam PF00575 S1 RNA binding domain 294 366 1.7E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 Pfam PF00575 S1 RNA binding domain 208 280 2.5E-25 T 11-10-2018 IPR003029 S1 domain GO:0003676 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 Pfam PF00575 S1 RNA binding domain 124 191 2.9E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 Pfam PF00575 S1 RNA binding domain 36 108 5.6E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 ATC04_08000 339647da7df7630024a0f6cc06cd9efa 489 SUPERFAMILY SSF50249 31 133 1.72E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_14295 b3ccfa32d6e53e84053aef2f5e282a56 438 Gene3D G3DSA:3.40.50.300 226 433 1.4E-51 T 11-10-2018 ATC04_14295 b3ccfa32d6e53e84053aef2f5e282a56 438 SUPERFAMILY SSF88723 11 151 3.24E-9 T 11-10-2018 IPR029060 PIN-like domain superfamily ATC04_14295 b3ccfa32d6e53e84053aef2f5e282a56 438 SMART SM00670 10 137 2.7E-18 T 11-10-2018 IPR002716 PIN domain ATC04_14295 b3ccfa32d6e53e84053aef2f5e282a56 438 SUPERFAMILY SSF52540 226 390 8.16E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_14295 b3ccfa32d6e53e84053aef2f5e282a56 438 Pfam PF02562 PhoH-like protein 228 431 4.4E-53 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 ATC04_14295 b3ccfa32d6e53e84053aef2f5e282a56 438 Pfam PF13638 PIN domain 12 149 7.5E-30 T 11-10-2018 IPR002716 PIN domain ATC04_14295 b3ccfa32d6e53e84053aef2f5e282a56 438 Gene3D G3DSA:3.40.50.1010 7 153 1.8E-19 T 11-10-2018 ATC04_11440 73e902c38264477b2abe4a166646e553 246 Gene3D G3DSA:3.90.79.10 9 153 3.1E-32 T 11-10-2018 ATC04_11440 73e902c38264477b2abe4a166646e553 246 Gene3D G3DSA:1.10.10.10 157 230 1.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_11440 73e902c38264477b2abe4a166646e553 246 SUPERFAMILY SSF46785 165 226 2.63E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_11440 73e902c38264477b2abe4a166646e553 246 Pfam PF00293 NUDIX domain 44 150 2.0E-9 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_11440 73e902c38264477b2abe4a166646e553 246 SUPERFAMILY SSF55811 39 160 7.31E-26 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_07605 9d30440cc4474802450de37202e2cff4 221 Pfam PF02080 TrkA-C domain 149 216 1.8E-12 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ATC04_07605 9d30440cc4474802450de37202e2cff4 221 Pfam PF02254 TrkA-N domain 3 118 6.8E-25 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ATC04_07605 9d30440cc4474802450de37202e2cff4 221 SUPERFAMILY SSF51735 1 143 1.1E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_07605 9d30440cc4474802450de37202e2cff4 221 Gene3D G3DSA:3.30.70.1450 139 217 3.2E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ATC04_07605 9d30440cc4474802450de37202e2cff4 221 Gene3D G3DSA:3.40.50.720 1 138 7.5E-31 T 11-10-2018 ATC04_07605 9d30440cc4474802450de37202e2cff4 221 SUPERFAMILY SSF116726 134 214 2.49E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ATC04_07605 9d30440cc4474802450de37202e2cff4 221 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.4E-9 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ATC04_07605 9d30440cc4474802450de37202e2cff4 221 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.4E-9 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ATC04_07605 9d30440cc4474802450de37202e2cff4 221 PRINTS PR00335 TrkA potassium uptake protein signature 59 69 3.4E-9 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ATC04_07605 9d30440cc4474802450de37202e2cff4 221 PRINTS PR00335 TrkA potassium uptake protein signature 72 86 3.4E-9 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ATC04_12830 f27ad862bbdd7e8a46f7eecfddd6b1c1 839 Gene3D G3DSA:3.30.470.30 651 839 3.8E-65 T 11-10-2018 ATC04_12830 f27ad862bbdd7e8a46f7eecfddd6b1c1 839 Gene3D G3DSA:3.60.21.10 172 425 8.2E-71 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ATC04_12830 f27ad862bbdd7e8a46f7eecfddd6b1c1 839 Gene3D G3DSA:3.40.50.300 2 171 4.1E-45 T 11-10-2018 ATC04_12830 f27ad862bbdd7e8a46f7eecfddd6b1c1 839 Pfam PF16542 PNKP adenylyltransferase domain, ligase domain 466 776 8.4E-128 T 11-10-2018 IPR032380 Polynucleotide kinase-phosphatase, ligase domain ATC04_12830 f27ad862bbdd7e8a46f7eecfddd6b1c1 839 SUPERFAMILY SSF52540 9 167 5.0E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12830 f27ad862bbdd7e8a46f7eecfddd6b1c1 839 SUPERFAMILY SSF56091 467 746 5.4E-13 T 11-10-2018 ATC04_12830 f27ad862bbdd7e8a46f7eecfddd6b1c1 839 Pfam PF00149 Calcineurin-like phosphoesterase 182 375 1.4E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ATC04_12830 f27ad862bbdd7e8a46f7eecfddd6b1c1 839 Pfam PF13671 AAA domain 11 139 4.5E-22 T 11-10-2018 ATC04_12830 f27ad862bbdd7e8a46f7eecfddd6b1c1 839 TIGRFAM TIGR04075 bacter_Pnkp: polynucleotide kinase-phosphatase 3 839 0.0 T 11-10-2018 IPR024028 Polynucleotide kinase-phosphatase, bacterial ATC04_12830 f27ad862bbdd7e8a46f7eecfddd6b1c1 839 SUPERFAMILY SSF56300 168 419 7.08E-45 T 11-10-2018 ATC04_12830 f27ad862bbdd7e8a46f7eecfddd6b1c1 839 Pfam PF16536 PNKP adenylyltransferase domain, C-terminal region 780 839 7.9E-26 T 11-10-2018 IPR032390 Polynucleotide kinase-phosphatase, C-terminal ATC04_12830 f27ad862bbdd7e8a46f7eecfddd6b1c1 839 Gene3D G3DSA:3.30.470.30 435 629 2.4E-61 T 11-10-2018 ATC04_16740 878895af49c49aa1f12923e16600787d 455 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 8 424 2.5E-179 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 ATC04_16740 878895af49c49aa1f12923e16600787d 455 Gene3D G3DSA:3.40.640.10 7 288 1.2E-98 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_16740 878895af49c49aa1f12923e16600787d 455 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 423 1.1E-131 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_16740 878895af49c49aa1f12923e16600787d 455 PIRSF PIRSF001434 1 427 7.1E-125 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_16740 878895af49c49aa1f12923e16600787d 455 SUPERFAMILY SSF53383 7 424 1.25E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_16740 878895af49c49aa1f12923e16600787d 455 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_16740 878895af49c49aa1f12923e16600787d 455 Gene3D G3DSA:3.90.1150.10 292 437 6.7E-50 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_01590 b16dc8a12bd5a4cf04fa34a0747c10c3 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 76 1.2E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_01590 b16dc8a12bd5a4cf04fa34a0747c10c3 242 SUPERFAMILY SSF46785 8 85 2.73E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_01590 b16dc8a12bd5a4cf04fa34a0747c10c3 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 7.4E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_01590 b16dc8a12bd5a4cf04fa34a0747c10c3 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 7.4E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_01590 b16dc8a12bd5a4cf04fa34a0747c10c3 242 SMART SM00345 17 76 2.3E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_01590 b16dc8a12bd5a4cf04fa34a0747c10c3 242 SMART SM00895 105 230 3.7E-22 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_01590 b16dc8a12bd5a4cf04fa34a0747c10c3 242 Pfam PF07729 FCD domain 105 229 1.9E-26 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_01590 b16dc8a12bd5a4cf04fa34a0747c10c3 242 SUPERFAMILY SSF48008 102 236 2.88E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_01590 b16dc8a12bd5a4cf04fa34a0747c10c3 242 Gene3D G3DSA:1.10.10.10 9 80 9.9E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_01590 b16dc8a12bd5a4cf04fa34a0747c10c3 242 Gene3D G3DSA:1.20.120.530 86 240 5.4E-27 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_17955 5cdd96b3ed6cea3c3b9947a720171f93 378 Pfam PF01464 Transglycosylase SLT domain 74 181 2.7E-15 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 ATC04_17955 5cdd96b3ed6cea3c3b9947a720171f93 378 SUPERFAMILY SSF51261 218 348 1.15E-17 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_17955 5cdd96b3ed6cea3c3b9947a720171f93 378 SUPERFAMILY SSF53955 62 197 4.18E-36 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ATC04_17955 5cdd96b3ed6cea3c3b9947a720171f93 378 Gene3D G3DSA:1.10.530.10 55 198 6.1E-36 T 11-10-2018 ATC04_17955 5cdd96b3ed6cea3c3b9947a720171f93 378 Gene3D G3DSA:2.70.70.10 218 378 1.5E-19 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_17955 5cdd96b3ed6cea3c3b9947a720171f93 378 Pfam PF01551 Peptidase family M23 251 349 4.9E-11 T 11-10-2018 IPR016047 Peptidase M23 ATC04_03345 eb81733782a2bf4c5ab1c205c072e689 366 Gene3D G3DSA:3.20.20.10 17 234 2.2E-97 T 11-10-2018 IPR029066 PLP-binding barrel ATC04_03345 eb81733782a2bf4c5ab1c205c072e689 366 Pfam PF14031 Putative serine dehydratase domain 251 346 1.0E-18 T 11-10-2018 IPR026956 D-serine dehydratase-like domain ATC04_03345 eb81733782a2bf4c5ab1c205c072e689 366 Gene3D G3DSA:2.40.37.20 8 362 2.2E-97 T 11-10-2018 ATC04_03345 eb81733782a2bf4c5ab1c205c072e689 366 SMART SM01119 251 349 3.4E-28 T 11-10-2018 IPR026956 D-serine dehydratase-like domain ATC04_03345 eb81733782a2bf4c5ab1c205c072e689 366 SUPERFAMILY SSF51419 16 241 1.57E-37 T 11-10-2018 IPR029066 PLP-binding barrel ATC04_03345 eb81733782a2bf4c5ab1c205c072e689 366 Pfam PF01168 Alanine racemase, N-terminal domain 15 237 7.0E-34 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_12410 9fbb3037db002858d306825bbb555de6 269 Gene3D G3DSA:1.25.40.10 3 189 1.2E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_12410 9fbb3037db002858d306825bbb555de6 269 SUPERFAMILY SSF48452 29 158 9.84E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_03215 d53e4436a6c3c9f7d682f43ba09349d9 469 Gene3D G3DSA:1.10.40.30 388 457 3.9E-137 T 11-10-2018 ATC04_03215 d53e4436a6c3c9f7d682f43ba09349d9 469 Gene3D G3DSA:1.10.275.10 2 123 2.8E-35 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal ATC04_03215 d53e4436a6c3c9f7d682f43ba09349d9 469 Pfam PF08328 Adenylosuccinate lyase C-terminal 337 456 1.9E-43 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 ATC04_03215 d53e4436a6c3c9f7d682f43ba09349d9 469 Gene3D G3DSA:1.20.200.10 124 458 3.9E-137 T 11-10-2018 ATC04_03215 d53e4436a6c3c9f7d682f43ba09349d9 469 Pfam PF00206 Lyase 21 316 9.0E-50 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal ATC04_03215 d53e4436a6c3c9f7d682f43ba09349d9 469 SUPERFAMILY SSF48557 19 466 1.57E-90 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 ATC04_03215 d53e4436a6c3c9f7d682f43ba09349d9 469 PRINTS PR00149 Fumarate lyase superfamily signature 169 187 4.5E-17 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_03215 d53e4436a6c3c9f7d682f43ba09349d9 469 PRINTS PR00149 Fumarate lyase superfamily signature 257 284 4.5E-17 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_03215 d53e4436a6c3c9f7d682f43ba09349d9 469 PRINTS PR00149 Fumarate lyase superfamily signature 300 316 4.5E-17 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_03215 d53e4436a6c3c9f7d682f43ba09349d9 469 PRINTS PR00149 Fumarate lyase superfamily signature 123 141 4.5E-17 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_03215 d53e4436a6c3c9f7d682f43ba09349d9 469 ProSitePatterns PS00163 Fumarate lyases signature. 300 309 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ATC04_03215 d53e4436a6c3c9f7d682f43ba09349d9 469 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 19 467 4.7E-100 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATC04_14235 9c60c0db5d8ed7dce5dc793b44ddfa29 344 Gene3D G3DSA:3.30.540.10 31 334 6.4E-128 T 11-10-2018 ATC04_14235 9c60c0db5d8ed7dce5dc793b44ddfa29 344 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 27 334 2.6E-137 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 ATC04_14235 9c60c0db5d8ed7dce5dc793b44ddfa29 344 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 27 338 5.7E-115 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 ATC04_14235 9c60c0db5d8ed7dce5dc793b44ddfa29 344 SUPERFAMILY SSF56655 25 337 8.06E-110 T 11-10-2018 ATC04_14235 9c60c0db5d8ed7dce5dc793b44ddfa29 344 PIRSF PIRSF004532 25 344 1.7E-140 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 ATC04_14235 9c60c0db5d8ed7dce5dc793b44ddfa29 344 Gene3D G3DSA:3.40.190.90 147 308 6.4E-128 T 11-10-2018 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 Gene3D G3DSA:3.30.930.10 114 580 4.2E-179 T 11-10-2018 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 SUPERFAMILY SSF55261 286 408 6.21E-36 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 Pfam PF01336 OB-fold nucleic acid binding domain 19 97 2.8E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 583 32.044 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 Gene3D G3DSA:3.30.1360.30 269 408 4.2E-179 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 Gene3D G3DSA:2.40.50.140 1 101 1.8E-31 T 11-10-2018 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 SUPERFAMILY SSF50249 2 101 1.35E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 SUPERFAMILY SSF55681 116 556 1.89E-95 T 11-10-2018 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 581 3.2E-206 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 Pfam PF02938 GAD domain 309 389 3.8E-15 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 205 218 3.9E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 473 489 3.9E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 517 531 3.9E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 188 200 3.9E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_09165 65b7d6b4f6d47ac2757973a79d9a97e4 600 Pfam PF00152 tRNA synthetases class II (D, K and N) 116 556 2.1E-99 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_14935 dc4288eb440b293e1407dedf70c1f60f 556 Gene3D G3DSA:3.40.140.20 218 376 3.4E-56 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATC04_14935 dc4288eb440b293e1407dedf70c1f60f 556 SUPERFAMILY SSF52335 11 200 4.21E-64 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ATC04_14935 dc4288eb440b293e1407dedf70c1f60f 556 PIRSF PIRSF000414 6 556 9.8E-197 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATC04_14935 dc4288eb440b293e1407dedf70c1f60f 556 SMART SM00798 142 466 4.9E-179 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATC04_14935 dc4288eb440b293e1407dedf70c1f60f 556 SMART SM00851 23 137 4.1E-49 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain ATC04_14935 dc4288eb440b293e1407dedf70c1f60f 556 SUPERFAMILY SSF53927 222 556 4.01E-116 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ATC04_14935 dc4288eb440b293e1407dedf70c1f60f 556 Pfam PF02142 MGS-like domain 23 136 9.3E-25 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain ATC04_14935 dc4288eb440b293e1407dedf70c1f60f 556 Pfam PF01808 AICARFT/IMPCHase bienzyme 142 465 7.6E-110 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATC04_14935 dc4288eb440b293e1407dedf70c1f60f 556 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 11 556 42.127 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATC04_14935 dc4288eb440b293e1407dedf70c1f60f 556 Gene3D G3DSA:3.40.50.1380 3 204 2.6E-84 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ATC04_14935 dc4288eb440b293e1407dedf70c1f60f 556 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 12 556 5.8E-169 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATC04_14935 dc4288eb440b293e1407dedf70c1f60f 556 Gene3D G3DSA:3.40.140.20 377 546 9.5E-54 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATC04_15105 e6f4e9901246fa0b16abff221047e7c8 286 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 284 7.8E-30 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ATC04_15105 e6f4e9901246fa0b16abff221047e7c8 286 Gene3D G3DSA:1.10.1040.10 191 286 3.5E-32 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATC04_15105 e6f4e9901246fa0b16abff221047e7c8 286 SUPERFAMILY SSF51735 1 185 4.3E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_15105 e6f4e9901246fa0b16abff221047e7c8 286 PIRSF PIRSF000105 1 286 3.5E-92 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 ATC04_15105 e6f4e9901246fa0b16abff221047e7c8 286 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 184 1.7E-57 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ATC04_15105 e6f4e9901246fa0b16abff221047e7c8 286 SUPERFAMILY SSF48179 187 285 2.64E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_15105 e6f4e9901246fa0b16abff221047e7c8 286 Gene3D G3DSA:3.40.50.720 1 190 5.7E-64 T 11-10-2018 ATC04_13185 8b77d73049f5b51165cb4ce4e71f5785 388 Gene3D G3DSA:3.20.20.20 14 272 2.0E-104 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATC04_13185 8b77d73049f5b51165cb4ce4e71f5785 388 PIRSF PIRSF004640 13 373 1.1E-144 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ATC04_13185 8b77d73049f5b51165cb4ce4e71f5785 388 Pfam PF04551 GcpE protein 22 362 9.1E-133 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ATC04_13185 8b77d73049f5b51165cb4ce4e71f5785 388 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 19 361 1.3E-128 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ATC04_13185 8b77d73049f5b51165cb4ce4e71f5785 388 SUPERFAMILY SSF56014 277 362 5.04E-12 T 11-10-2018 ATC04_13185 8b77d73049f5b51165cb4ce4e71f5785 388 SUPERFAMILY SSF51717 46 219 1.41E-10 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATC04_13185 8b77d73049f5b51165cb4ce4e71f5785 388 Gene3D G3DSA:3.30.413.10 273 372 2.1E-36 T 11-10-2018 ATC04_13185 8b77d73049f5b51165cb4ce4e71f5785 388 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 17 368 33.48 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ATC04_17475 d30863242849c6413b69d287cae225f2 302 SUPERFAMILY SSF48150 3 221 1.57E-64 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATC04_17475 d30863242849c6413b69d287cae225f2 302 Gene3D G3DSA:1.10.1670.10 7 209 4.0E-69 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ATC04_17475 d30863242849c6413b69d287cae225f2 302 Pfam PF00633 Helix-hairpin-helix motif 97 126 4.8E-8 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 ATC04_17475 d30863242849c6413b69d287cae225f2 302 SMART SM00525 190 210 3.7E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 ATC04_17475 d30863242849c6413b69d287cae225f2 302 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 ATC04_17475 d30863242849c6413b69d287cae225f2 302 Gene3D G3DSA:1.10.340.30 18 130 4.0E-69 T 11-10-2018 ATC04_17475 d30863242849c6413b69d287cae225f2 302 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 33 160 5.1E-15 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATC04_17475 d30863242849c6413b69d287cae225f2 302 SMART SM00478 37 189 4.7E-38 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATC04_17475 d30863242849c6413b69d287cae225f2 302 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 191 207 4.8E-7 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 ATC04_17475 d30863242849c6413b69d287cae225f2 302 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 191 207 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ATC04_05135 3fd149541490d4f294c70dbe21244ebc 225 Pfam PF00293 NUDIX domain 66 121 1.7E-10 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_05135 3fd149541490d4f294c70dbe21244ebc 225 Gene3D G3DSA:3.90.79.10 15 209 2.7E-41 T 11-10-2018 ATC04_05135 3fd149541490d4f294c70dbe21244ebc 225 SUPERFAMILY SSF55811 65 202 6.94E-27 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 Pfam PF00288 GHMP kinases N terminal domain 128 194 1.2E-16 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 Pfam PF10509 Galactokinase galactose-binding signature 20 66 2.4E-23 T 11-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 PIRSF PIRSF000530 2 394 3.0E-119 T 11-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 PRINTS PR00473 Galactokinase signature 277 291 1.9E-24 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 PRINTS PR00473 Galactokinase signature 105 116 1.9E-24 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 PRINTS PR00473 Galactokinase signature 126 144 1.9E-24 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 PRINTS PR00473 Galactokinase signature 36 54 1.9E-24 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 Gene3D G3DSA:3.30.230.10 2 220 1.9E-64 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 SUPERFAMILY SSF54211 10 217 2.66E-59 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 Pfam PF08544 GHMP kinases C terminal 293 371 1.1E-13 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 SUPERFAMILY SSF55060 222 392 2.88E-47 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 ProSitePatterns PS00106 Galactokinase signature. 36 47 - T 11-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 Gene3D G3DSA:3.30.70.890 221 393 3.1E-59 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 TIGRFAM TIGR00131 gal_kin: galactokinase 15 375 1.8E-90 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 PRINTS PR00959 Mevalonate kinase family signature 176 195 1.9E-39 T 11-10-2018 ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 PRINTS PR00959 Mevalonate kinase family signature 34 58 1.9E-39 T 11-10-2018 ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 PRINTS PR00959 Mevalonate kinase family signature 340 357 1.9E-39 T 11-10-2018 ATC04_01070 15faa1b8b1194a4aa3cd39fca0c5dad5 394 PRINTS PR00959 Mevalonate kinase family signature 133 155 1.9E-39 T 11-10-2018 ATC04_07880 fe650bb28e634a186c66e84398ccfb77 87 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 1 87 18.187 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 ATC04_07880 fe650bb28e634a186c66e84398ccfb77 87 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 87 2.8E-23 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 ATC04_07880 fe650bb28e634a186c66e84398ccfb77 87 Gene3D G3DSA:1.10.287.1080 1 87 2.2E-22 T 11-10-2018 ATC04_07880 fe650bb28e634a186c66e84398ccfb77 87 SUPERFAMILY SSF101386 2 87 1.0E-21 T 11-10-2018 ATC04_07880 fe650bb28e634a186c66e84398ccfb77 87 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 2 86 5.0E-10 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 167 319 4.8E-39 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 96 157 6.0E-16 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 342 401 9.4E-12 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 Gene3D G3DSA:3.30.413.10 159 337 9.3E-120 T 11-10-2018 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 PRINTS PR00397 Sirohaem Fe-binding site signature 468 486 3.3E-9 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 PRINTS PR00397 Sirohaem Fe-binding site signature 419 437 3.3E-9 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 SUPERFAMILY SSF55124 337 410 5.89E-14 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 Gene3D G3DSA:3.90.480.20 29 401 9.3E-120 T 11-10-2018 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 468 484 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 SUPERFAMILY SSF55124 17 166 4.58E-35 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 419 544 1.6E-10 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 Gene3D G3DSA:3.30.413.10 416 566 2.7E-35 T 11-10-2018 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 SUPERFAMILY SSF56014 167 318 1.44E-46 T 11-10-2018 ATC04_08505 81db321998c4f6f1deaf457bd19b4c71 566 SUPERFAMILY SSF56014 415 563 1.83E-29 T 11-10-2018 ATC04_15785 ec1111d56edd129247ddd0ee86a4fb2f 337 SUPERFAMILY SSF53822 66 334 2.36E-56 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ATC04_15785 ec1111d56edd129247ddd0ee86a4fb2f 337 Gene3D G3DSA:3.40.50.2300 62 315 2.1E-60 T 11-10-2018 ATC04_15785 ec1111d56edd129247ddd0ee86a4fb2f 337 Gene3D G3DSA:1.10.260.40 7 61 6.0E-22 T 11-10-2018 ATC04_15785 ec1111d56edd129247ddd0ee86a4fb2f 337 Pfam PF13377 Periplasmic binding protein-like domain 183 336 4.9E-29 T 11-10-2018 ATC04_15785 ec1111d56edd129247ddd0ee86a4fb2f 337 SMART SM00354 8 78 1.6E-27 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATC04_15785 ec1111d56edd129247ddd0ee86a4fb2f 337 SUPERFAMILY SSF47413 8 67 5.63E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_15785 ec1111d56edd129247ddd0ee86a4fb2f 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 3.3E-16 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATC04_15785 ec1111d56edd129247ddd0ee86a4fb2f 337 Gene3D G3DSA:3.40.50.2300 171 298 2.1E-60 T 11-10-2018 ATC04_05915 eb6607575760b3a96627e9cee7d19245 353 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 2 350 2.6E-48 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_05915 eb6607575760b3a96627e9cee7d19245 353 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 213 349 4.8E-36 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_05915 eb6607575760b3a96627e9cee7d19245 353 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 353 72.13 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_05915 eb6607575760b3a96627e9cee7d19245 353 SUPERFAMILY SSF56194 213 350 7.06E-31 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_05915 eb6607575760b3a96627e9cee7d19245 353 Gene3D G3DSA:3.30.43.10 1 65 1.3E-16 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 ATC04_05915 eb6607575760b3a96627e9cee7d19245 353 Gene3D G3DSA:3.90.78.10 230 353 2.6E-35 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_05915 eb6607575760b3a96627e9cee7d19245 353 Gene3D G3DSA:3.30.465.10 67 224 2.3E-40 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ATC04_05915 eb6607575760b3a96627e9cee7d19245 353 SUPERFAMILY SSF56176 3 188 3.27E-30 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ATC04_05915 eb6607575760b3a96627e9cee7d19245 353 Pfam PF01565 FAD binding domain 15 141 2.4E-18 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ATC04_02675 918e1765161f01c60055a49f73c107f8 514 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 434 2.1E-73 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ATC04_02675 918e1765161f01c60055a49f73c107f8 514 Gene3D G3DSA:3.40.190.10 64 269 7.3E-102 T 11-10-2018 ATC04_02675 918e1765161f01c60055a49f73c107f8 514 SUPERFAMILY SSF53850 53 507 1.72E-107 T 11-10-2018 ATC04_02675 918e1765161f01c60055a49f73c107f8 514 PIRSF PIRSF002741 2 514 1.1E-83 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ATC04_02675 918e1765161f01c60055a49f73c107f8 514 Gene3D G3DSA:3.10.105.10 270 469 7.3E-102 T 11-10-2018 ATC04_11635 700c9a0815226ebfa49024eb4e413107 211 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 6 197 8.9E-45 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 ATC04_11635 700c9a0815226ebfa49024eb4e413107 211 Pfam PF01725 Ham1 family 6 197 2.2E-53 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 ATC04_11635 700c9a0815226ebfa49024eb4e413107 211 SUPERFAMILY SSF52972 6 200 1.52E-58 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ATC04_11635 700c9a0815226ebfa49024eb4e413107 211 Hamap MF_01405 dITP/XTP pyrophosphatase. 4 202 42.679 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 ATC04_11635 700c9a0815226ebfa49024eb4e413107 211 Gene3D G3DSA:3.90.950.10 3 205 1.9E-65 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ATC04_07220 dae3ce567609feda0265022ebc1d2f89 266 SUPERFAMILY SSF53271 86 252 6.25E-12 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ATC04_07220 dae3ce567609feda0265022ebc1d2f89 266 Pfam PF00156 Phosphoribosyl transferase domain 166 252 8.0E-7 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ATC04_04100 54d94a2ef3763403f87acb28a873a085 387 Gene3D G3DSA:1.20.58.710 119 224 8.9E-104 T 11-10-2018 ATC04_04100 54d94a2ef3763403f87acb28a873a085 387 SUPERFAMILY SSF56601 3 381 3.6E-76 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ATC04_04100 54d94a2ef3763403f87acb28a873a085 387 Gene3D G3DSA:3.40.710.10 67 361 8.9E-104 T 11-10-2018 ATC04_04100 54d94a2ef3763403f87acb28a873a085 387 Pfam PF00144 Beta-lactamase 72 366 7.6E-32 T 11-10-2018 IPR001466 Beta-lactamase-related ATC04_04920 a6da54c30e0103e785304b1c16ca94bf 646 PRINTS PR00095 Anthranilate synthase component I signature 559 573 8.2E-15 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATC04_04920 a6da54c30e0103e785304b1c16ca94bf 646 PRINTS PR00095 Anthranilate synthase component I signature 464 477 8.2E-15 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATC04_04920 a6da54c30e0103e785304b1c16ca94bf 646 PRINTS PR00095 Anthranilate synthase component I signature 574 588 8.2E-15 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATC04_04920 a6da54c30e0103e785304b1c16ca94bf 646 PRINTS PR00095 Anthranilate synthase component I signature 478 491 8.2E-15 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATC04_04920 a6da54c30e0103e785304b1c16ca94bf 646 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 27 104 6.2E-5 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 ATC04_04920 a6da54c30e0103e785304b1c16ca94bf 646 Gene3D G3DSA:3.40.50.300 6 138 3.5E-23 T 11-10-2018 ATC04_04920 a6da54c30e0103e785304b1c16ca94bf 646 Pfam PF00425 chorismate binding enzyme 361 622 2.2E-84 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ATC04_04920 a6da54c30e0103e785304b1c16ca94bf 646 Gene3D G3DSA:3.60.120.10 173 634 1.3E-125 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ATC04_04920 a6da54c30e0103e785304b1c16ca94bf 646 Pfam PF04715 Anthranilate synthase component I, N terminal region 185 321 1.7E-7 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATC04_04920 a6da54c30e0103e785304b1c16ca94bf 646 SUPERFAMILY SSF56322 178 631 1.15E-108 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ATC04_04920 a6da54c30e0103e785304b1c16ca94bf 646 SUPERFAMILY SSF52540 19 138 1.98E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06545 614d3df404517d9340125de2a77e9c17 423 Gene3D G3DSA:3.50.50.60 2 195 3.2E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_06545 614d3df404517d9340125de2a77e9c17 423 Gene3D G3DSA:3.50.50.60 221 371 1.2E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_06545 614d3df404517d9340125de2a77e9c17 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 7.2E-18 T 11-10-2018 ATC04_06545 614d3df404517d9340125de2a77e9c17 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 7.2E-18 T 11-10-2018 ATC04_06545 614d3df404517d9340125de2a77e9c17 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 7.2E-18 T 11-10-2018 ATC04_06545 614d3df404517d9340125de2a77e9c17 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 7.2E-18 T 11-10-2018 ATC04_06545 614d3df404517d9340125de2a77e9c17 423 SUPERFAMILY SSF51905 9 365 1.67E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_06545 614d3df404517d9340125de2a77e9c17 423 Pfam PF01494 FAD binding domain 9 354 1.6E-48 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 6.5E-32 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 SUPERFAMILY SSF52540 6 221 5.68E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.5E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 SUPERFAMILY SSF50465 304 396 2.62E-34 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 3.4E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 395 5.5E-213 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 Gene3D G3DSA:2.40.30.10 208 336 1.2E-51 T 11-10-2018 ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 SUPERFAMILY SSF50447 207 303 4.57E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 Gene3D G3DSA:3.40.50.300 1 205 9.2E-69 T 11-10-2018 ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 57.886 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 2.9E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 PRINTS PR00315 GTP-binding elongation factor signature 96 107 8.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 PRINTS PR00315 GTP-binding elongation factor signature 133 142 8.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 PRINTS PR00315 GTP-binding elongation factor signature 80 90 8.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 PRINTS PR00315 GTP-binding elongation factor signature 60 68 8.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06090 f18c7acb04ddc366ed3a423a1a5a995a 396 Gene3D G3DSA:2.40.30.10 340 395 2.7E-27 T 11-10-2018 ATC04_06840 f1dcd141d4df1159a20be18ac70adaab 116 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 61 91 4.5E-8 T 11-10-2018 IPR019933 DivIVA domain ATC04_11980 84f2411a71da804a653fe6083b6b5e5b 208 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 10 68 1.6E-13 T 11-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 ATC04_11980 84f2411a71da804a653fe6083b6b5e5b 208 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 73 140 2.5E-28 T 11-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 ATC04_11980 84f2411a71da804a653fe6083b6b5e5b 208 Gene3D G3DSA:1.10.60.10 81 146 8.7E-27 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 ATC04_11980 84f2411a71da804a653fe6083b6b5e5b 208 Pfam PF04023 FeoA domain 159 199 6.3E-6 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ATC04_11980 84f2411a71da804a653fe6083b6b5e5b 208 SUPERFAMILY SSF47979 72 146 3.14E-25 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 ATC04_11980 84f2411a71da804a653fe6083b6b5e5b 208 SMART SM00529 33 132 5.3E-37 T 11-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 ATC04_11980 84f2411a71da804a653fe6083b6b5e5b 208 SUPERFAMILY SSF46785 10 71 4.07E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_11980 84f2411a71da804a653fe6083b6b5e5b 208 Gene3D G3DSA:1.10.10.10 8 79 1.0E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_13065 31befd9288f9a45963d6975419af8120 389 SUPERFAMILY SSF53187 8 388 1.89E-55 T 11-10-2018 ATC04_13065 31befd9288f9a45963d6975419af8120 389 SUPERFAMILY SSF55031 184 292 9.42E-20 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ATC04_13065 31befd9288f9a45963d6975419af8120 389 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 107 144 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 ATC04_13065 31befd9288f9a45963d6975419af8120 389 Pfam PF01546 Peptidase family M20/M25/M40 74 385 6.4E-31 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ATC04_13065 31befd9288f9a45963d6975419af8120 389 Pfam PF07687 Peptidase dimerisation domain 178 289 5.4E-19 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ATC04_13065 31befd9288f9a45963d6975419af8120 389 Gene3D G3DSA:3.30.70.360 181 297 2.2E-92 T 11-10-2018 ATC04_13065 31befd9288f9a45963d6975419af8120 389 Gene3D G3DSA:3.40.630.10 15 373 2.2E-92 T 11-10-2018 ATC04_13065 31befd9288f9a45963d6975419af8120 389 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 13 384 7.0E-108 T 11-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 ATC04_11250 7be8aaabac037acec91bd52469777541 277 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 77 272 9.2E-77 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 Pfam PF00813 FliP family 77 268 2.0E-72 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 72 81 4.3E-13 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 172 184 4.3E-13 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 262 272 4.3E-13 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 194 206 4.3E-13 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 132 144 4.3E-13 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 144 158 4.3E-13 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 249 261 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 113 132 2.2E-61 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 246 271 2.2E-61 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 201 221 2.2E-61 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 74 93 2.2E-61 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 222 243 2.2E-61 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATC04_11250 7be8aaabac037acec91bd52469777541 277 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 93 113 2.2E-61 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATC04_12260 ed48e90d7d4c1ad1e31cb8147abee4d0 276 Pfam PF02567 Phenazine biosynthesis-like protein 8 256 1.3E-39 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATC04_12260 ed48e90d7d4c1ad1e31cb8147abee4d0 276 Gene3D G3DSA:3.10.310.10 125 267 1.4E-63 T 11-10-2018 ATC04_12260 ed48e90d7d4c1ad1e31cb8147abee4d0 276 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 254 5.2E-41 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATC04_12260 ed48e90d7d4c1ad1e31cb8147abee4d0 276 Gene3D G3DSA:3.10.310.10 7 124 1.4E-63 T 11-10-2018 ATC04_12260 ed48e90d7d4c1ad1e31cb8147abee4d0 276 PIRSF PIRSF016184 1 276 5.8E-56 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATC04_12260 ed48e90d7d4c1ad1e31cb8147abee4d0 276 SUPERFAMILY SSF54506 1 275 1.8E-58 T 11-10-2018 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 13 674 85.78 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 Gene3D G3DSA:3.30.230.10 249 432 4.5E-69 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 604 663 3.5E-27 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 SUPERFAMILY SSF56719 428 669 8.89E-83 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 ProSitePatterns PS00177 DNA topoisomerase II signature. 456 464 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 185 2.9E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 Gene3D G3DSA:3.30.565.10 12 228 9.1E-83 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 Gene3D G3DSA:3.40.50.670 433 674 8.4E-97 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR01159 DNA gyrase subunit B signature 206 219 4.3E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR01159 DNA gyrase subunit B signature 16 26 4.3E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR01159 DNA gyrase subunit B signature 191 206 4.3E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR01159 DNA gyrase subunit B signature 250 272 4.3E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR01159 DNA gyrase subunit B signature 643 659 4.3E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR01159 DNA gyrase subunit B signature 276 294 4.3E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR01159 DNA gyrase subunit B signature 627 639 4.3E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR01159 DNA gyrase subunit B signature 504 513 4.3E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR01159 DNA gyrase subunit B signature 394 408 4.3E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR01159 DNA gyrase subunit B signature 346 362 4.3E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR01159 DNA gyrase subunit B signature 408 428 4.3E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR00418 DNA topoisomerase II family signature 123 137 6.4E-66 T 11-10-2018 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR00418 DNA topoisomerase II family signature 454 468 6.4E-66 T 11-10-2018 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR00418 DNA topoisomerase II family signature 520 536 6.4E-66 T 11-10-2018 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR00418 DNA topoisomerase II family signature 538 555 6.4E-66 T 11-10-2018 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR00418 DNA topoisomerase II family signature 606 622 6.4E-66 T 11-10-2018 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR00418 DNA topoisomerase II family signature 80 93 6.4E-66 T 11-10-2018 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR00418 DNA topoisomerase II family signature 558 570 6.4E-66 T 11-10-2018 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR00418 DNA topoisomerase II family signature 302 315 6.4E-66 T 11-10-2018 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 PRINTS PR00418 DNA topoisomerase II family signature 45 60 6.4E-66 T 11-10-2018 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 SUPERFAMILY SSF55874 16 222 7.39E-67 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 SMART SM00387 41 186 3.1E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 SMART SM00433 45 667 0.0 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 Pfam PF01751 Toprim domain 453 556 5.3E-15 T 11-10-2018 IPR006171 TOPRIM domain ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 SUPERFAMILY SSF54211 251 424 2.85E-54 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 16 674 1.6E-280 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATC04_00630 f234f09628dc21d90de3f1f3cd6401bb 674 Pfam PF00204 DNA gyrase B 251 424 2.5E-60 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATC04_07500 34c9ba0e1234ad8dbb56adc2b40d31c3 320 Pfam PF09754 PAC2 family 28 244 2.2E-34 T 11-10-2018 IPR019151 Proteasome assembly chaperone 2 ATC04_07500 34c9ba0e1234ad8dbb56adc2b40d31c3 320 SUPERFAMILY SSF159659 8 268 2.22E-70 T 11-10-2018 ATC04_07500 34c9ba0e1234ad8dbb56adc2b40d31c3 320 PIRSF PIRSF028754 6 307 2.2E-75 T 11-10-2018 IPR008492 Protein of unknown function DUF774 ATC04_07500 34c9ba0e1234ad8dbb56adc2b40d31c3 320 Gene3D G3DSA:1.10.287.100 226 264 1.5E-76 T 11-10-2018 ATC04_07500 34c9ba0e1234ad8dbb56adc2b40d31c3 320 Gene3D G3DSA:3.40.50.10900 24 225 1.5E-76 T 11-10-2018 IPR038389 Proteasome assembly chaperone 2 superfamily ATC04_17830 f1842c9f2380f6a3600c6d379907da4d 197 SMART SM00857 3 141 2.2E-52 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_17830 f1842c9f2380f6a3600c6d379907da4d 197 Pfam PF00239 Resolvase, N terminal domain 4 140 5.2E-43 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_17830 f1842c9f2380f6a3600c6d379907da4d 197 Gene3D G3DSA:3.40.50.1390 3 130 4.4E-42 T 11-10-2018 ATC04_17830 f1842c9f2380f6a3600c6d379907da4d 197 SUPERFAMILY SSF53041 2 140 4.45E-43 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ATC04_17830 f1842c9f2380f6a3600c6d379907da4d 197 ProSitePatterns PS00398 Site-specific recombinases signature 2. 60 72 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_18265 f1842c9f2380f6a3600c6d379907da4d 197 SMART SM00857 3 141 2.2E-52 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_18265 f1842c9f2380f6a3600c6d379907da4d 197 Pfam PF00239 Resolvase, N terminal domain 4 140 5.2E-43 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_18265 f1842c9f2380f6a3600c6d379907da4d 197 Gene3D G3DSA:3.40.50.1390 3 130 4.4E-42 T 11-10-2018 ATC04_18265 f1842c9f2380f6a3600c6d379907da4d 197 SUPERFAMILY SSF53041 2 140 4.45E-43 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ATC04_18265 f1842c9f2380f6a3600c6d379907da4d 197 ProSitePatterns PS00398 Site-specific recombinases signature 2. 60 72 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_12775 57aa3892351214f7b8bac750d73036b7 232 SUPERFAMILY SSF51735 1 230 4.5E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_12775 57aa3892351214f7b8bac750d73036b7 232 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 126 154 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_12775 57aa3892351214f7b8bac750d73036b7 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 158 1.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_12775 57aa3892351214f7b8bac750d73036b7 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 213 1.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_12775 57aa3892351214f7b8bac750d73036b7 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 18 1.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_12775 57aa3892351214f7b8bac750d73036b7 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 113 129 1.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_12775 57aa3892351214f7b8bac750d73036b7 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 177 1.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_12775 57aa3892351214f7b8bac750d73036b7 232 Gene3D G3DSA:3.40.50.720 1 231 2.2E-68 T 11-10-2018 ATC04_12775 57aa3892351214f7b8bac750d73036b7 232 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 6 228 5.7E-52 T 11-10-2018 ATC04_18460 99b04a1929e0403cd4857dd71650bbab 667 SUPERFAMILY SSF53335 261 579 4.26E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_18460 99b04a1929e0403cd4857dd71650bbab 667 Gene3D G3DSA:3.40.50.150 309 619 7.0E-49 T 11-10-2018 ATC04_18460 99b04a1929e0403cd4857dd71650bbab 667 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 451 457 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ATC04_18460 99b04a1929e0403cd4857dd71650bbab 667 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 468 492 5.1E-17 T 11-10-2018 ATC04_18460 99b04a1929e0403cd4857dd71650bbab 667 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 448 460 5.1E-17 T 11-10-2018 ATC04_18460 99b04a1929e0403cd4857dd71650bbab 667 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 354 368 5.1E-17 T 11-10-2018 ATC04_18460 99b04a1929e0403cd4857dd71650bbab 667 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 330 346 5.1E-17 T 11-10-2018 ATC04_18460 99b04a1929e0403cd4857dd71650bbab 667 Pfam PF02384 N-6 DNA Methylase 309 572 3.8E-28 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 ATC04_13755 765fad33da4fe3d98ec3ecc0d6940eeb 512 Gene3D G3DSA:3.90.1300.10 4 495 5.8E-177 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ATC04_13755 765fad33da4fe3d98ec3ecc0d6940eeb 512 SUPERFAMILY SSF75304 2 488 8.37E-152 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ATC04_13755 765fad33da4fe3d98ec3ecc0d6940eeb 512 Pfam PF01425 Amidase 25 477 2.0E-147 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ATC04_13755 765fad33da4fe3d98ec3ecc0d6940eeb 512 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 14 488 5.5E-179 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ATC04_13755 765fad33da4fe3d98ec3ecc0d6940eeb 512 ProSitePatterns PS00571 Amidases signature. 157 188 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 ATC04_13755 765fad33da4fe3d98ec3ecc0d6940eeb 512 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 489 86.219 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ATC04_10345 409578151047c150c462061ed1eced59 247 Hamap MF_00052_B Ribonuclease HII [rnhB]. 31 231 31.315 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 ATC04_10345 409578151047c150c462061ed1eced59 247 SUPERFAMILY SSF53098 27 234 3.03E-49 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_10345 409578151047c150c462061ed1eced59 247 Gene3D G3DSA:3.30.420.10 9 242 3.5E-61 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_10345 409578151047c150c462061ed1eced59 247 Pfam PF01351 Ribonuclease HII 36 229 4.3E-28 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain ATC04_03380 85b846c3d241ae233e5346ec450410a3 101 Gene3D G3DSA:3.10.450.50 4 101 1.5E-14 T 11-10-2018 ATC04_03380 85b846c3d241ae233e5346ec450410a3 101 SUPERFAMILY SSF54427 4 100 1.86E-13 T 11-10-2018 IPR032710 NTF2-like domain superfamily ATC04_03380 85b846c3d241ae233e5346ec450410a3 101 Pfam PF12680 SnoaL-like domain 8 100 1.0E-6 T 11-10-2018 IPR037401 SnoaL-like domain ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 SUPERFAMILY SSF51230 3 95 4.45E-26 T 11-10-2018 IPR011053 Single hybrid motif ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 Pfam PF02817 e3 binding domain 268 301 9.3E-15 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 SUPERFAMILY SSF51230 125 218 1.7E-26 T 11-10-2018 IPR011053 Single hybrid motif ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 Gene3D G3DSA:2.40.50.100 119 224 1.4E-26 T 11-10-2018 ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 Gene3D G3DSA:2.40.50.100 1 104 1.5E-26 T 11-10-2018 ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 Pfam PF00364 Biotin-requiring enzyme 4 76 5.9E-22 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 Pfam PF00364 Biotin-requiring enzyme 126 198 6.0E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 Gene3D G3DSA:3.30.559.10 316 567 9.9E-82 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 336 562 6.1E-75 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 Gene3D G3DSA:4.10.320.10 258 306 6.8E-17 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 149 178 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 TIGRFAM TIGR02927 SucB_Actino: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 1 572 4.1E-255 T 11-10-2018 IPR014276 2-oxoglutarate dehydrogenase, E2 component KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 SUPERFAMILY SSF52777 325 563 1.07E-76 T 11-10-2018 ATC04_07485 da7896489c70eed30a7056ed0a960bc2 572 SUPERFAMILY SSF47005 260 304 1.83E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ATC04_06935 e79ce3b5dce3fa7cfb02e5dd29d3e2ef 385 Gene3D G3DSA:3.40.50.1400 9 326 3.3E-111 T 11-10-2018 ATC04_06935 e79ce3b5dce3fa7cfb02e5dd29d3e2ef 385 Gene3D G3DSA:3.40.50.1400 150 311 3.3E-111 T 11-10-2018 ATC04_06935 e79ce3b5dce3fa7cfb02e5dd29d3e2ef 385 Pfam PF00762 Ferrochelatase 7 329 2.0E-87 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ATC04_06935 e79ce3b5dce3fa7cfb02e5dd29d3e2ef 385 SUPERFAMILY SSF53800 5 333 1.13E-72 T 11-10-2018 ATC04_06935 e79ce3b5dce3fa7cfb02e5dd29d3e2ef 385 Hamap MF_00323 Ferrochelatase [hemH]. 5 330 28.152 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ATC04_08605 e17da90d26102808f3e182223bf22eca 138 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 117 125 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08605 e17da90d26102808f3e182223bf22eca 138 SMART SM00562 2 138 1.2E-67 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATC04_08605 e17da90d26102808f3e182223bf22eca 138 SUPERFAMILY SSF54919 1 137 1.44E-52 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATC04_08605 e17da90d26102808f3e182223bf22eca 138 Pfam PF00334 Nucleoside diphosphate kinase 3 137 1.4E-52 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATC04_08605 e17da90d26102808f3e182223bf22eca 138 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 2 138 30.415 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATC04_08605 e17da90d26102808f3e182223bf22eca 138 Gene3D G3DSA:3.30.70.141 1 138 2.9E-56 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATC04_08605 e17da90d26102808f3e182223bf22eca 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 9.3E-36 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATC04_08605 e17da90d26102808f3e182223bf22eca 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 9.3E-36 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATC04_08605 e17da90d26102808f3e182223bf22eca 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 5 27 9.3E-36 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATC04_08605 e17da90d26102808f3e182223bf22eca 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 117 136 9.3E-36 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATC04_16770 115cefc5d09d8b5a3f1c7e88d5a54493 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 4.9E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ATC04_16770 115cefc5d09d8b5a3f1c7e88d5a54493 258 Pfam PF00455 DeoR C terminal sensor domain 76 238 8.8E-45 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain ATC04_16770 115cefc5d09d8b5a3f1c7e88d5a54493 258 SUPERFAMILY SSF100950 76 239 3.14E-25 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_16770 115cefc5d09d8b5a3f1c7e88d5a54493 258 SUPERFAMILY SSF46785 4 60 1.35E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_16770 115cefc5d09d8b5a3f1c7e88d5a54493 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 ATC04_16770 115cefc5d09d8b5a3f1c7e88d5a54493 258 Gene3D G3DSA:1.10.10.10 1 59 1.5E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16770 115cefc5d09d8b5a3f1c7e88d5a54493 258 SMART SM01134 74 239 5.7E-59 T 11-10-2018 ATC04_16770 115cefc5d09d8b5a3f1c7e88d5a54493 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.0E-8 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ATC04_16770 115cefc5d09d8b5a3f1c7e88d5a54493 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.0E-8 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ATC04_16770 115cefc5d09d8b5a3f1c7e88d5a54493 258 SMART SM00420 6 58 4.6E-17 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ATC04_13470 c1ce240f52bc5d44a654fd3f4ec7d4db 388 PIRSF PIRSF006621 12 346 3.0E-100 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ATC04_13470 c1ce240f52bc5d44a654fd3f4ec7d4db 388 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 16 334 1.4E-109 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 ATC04_13470 c1ce240f52bc5d44a654fd3f4ec7d4db 388 Gene3D G3DSA:3.20.20.70 18 263 7.2E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_13470 c1ce240f52bc5d44a654fd3f4ec7d4db 388 Pfam PF01207 Dihydrouridine synthase (Dus) 25 332 1.2E-96 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ATC04_13470 c1ce240f52bc5d44a654fd3f4ec7d4db 388 Gene3D G3DSA:1.10.1200.80 270 334 8.3E-8 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 ATC04_13470 c1ce240f52bc5d44a654fd3f4ec7d4db 388 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 107 125 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ATC04_13470 c1ce240f52bc5d44a654fd3f4ec7d4db 388 SUPERFAMILY SSF51395 23 334 5.62E-80 T 11-10-2018 ATC04_08650 59ca356feb6c2a2f5f70c07c3b56d92c 84 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.9E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_08650 59ca356feb6c2a2f5f70c07c3b56d92c 84 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.9E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_08650 59ca356feb6c2a2f5f70c07c3b56d92c 84 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.9E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_08650 59ca356feb6c2a2f5f70c07c3b56d92c 84 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 27.207 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_08650 59ca356feb6c2a2f5f70c07c3b56d92c 84 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 1.9E-34 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_08650 59ca356feb6c2a2f5f70c07c3b56d92c 84 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_08650 59ca356feb6c2a2f5f70c07c3b56d92c 84 SUPERFAMILY SSF110324 2 81 4.19E-31 T 11-10-2018 ATC04_08650 59ca356feb6c2a2f5f70c07c3b56d92c 84 Gene3D G3DSA:2.40.50.100 21 84 1.5E-27 T 11-10-2018 ATC04_08650 59ca356feb6c2a2f5f70c07c3b56d92c 84 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 72 7.0E-16 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_08650 59ca356feb6c2a2f5f70c07c3b56d92c 84 Pfam PF01016 Ribosomal L27 protein 2 80 3.3E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_02050 a547ad83a97a8a454949c1a131dcb880 413 Gene3D G3DSA:1.10.287.130 146 259 3.0E-19 T 11-10-2018 ATC04_02050 a547ad83a97a8a454949c1a131dcb880 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 202 259 1.4E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_02050 a547ad83a97a8a454949c1a131dcb880 413 Gene3D G3DSA:3.30.565.10 264 407 7.0E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_02050 a547ad83a97a8a454949c1a131dcb880 413 SMART SM00304 142 200 0.0052 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ATC04_02050 a547ad83a97a8a454949c1a131dcb880 413 SUPERFAMILY SSF47384 185 259 1.02E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ATC04_02050 a547ad83a97a8a454949c1a131dcb880 413 SUPERFAMILY SSF55874 248 398 3.8E-20 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_02050 a547ad83a97a8a454949c1a131dcb880 413 SMART SM00387 305 402 2.5E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_02050 a547ad83a97a8a454949c1a131dcb880 413 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 307 400 4.4E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_02050 a547ad83a97a8a454949c1a131dcb880 413 SMART SM00388 201 259 1.1E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_05470 85d5cec23cfcd90aa84687179bc4cbb8 261 Gene3D G3DSA:3.90.226.10 1 200 5.4E-52 T 11-10-2018 ATC04_05470 85d5cec23cfcd90aa84687179bc4cbb8 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 259 4.1E-45 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ATC04_05470 85d5cec23cfcd90aa84687179bc4cbb8 261 SUPERFAMILY SSF52096 2 260 1.42E-63 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_05470 85d5cec23cfcd90aa84687179bc4cbb8 261 Gene3D G3DSA:1.10.12.10 202 260 3.4E-13 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ATC04_08265 8f0d13a3dec9baa242f5bbc388920db4 317 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 76 98 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site ATC04_08265 8f0d13a3dec9baa242f5bbc388920db4 317 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 24 308 1.8E-92 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 ATC04_08265 8f0d13a3dec9baa242f5bbc388920db4 317 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 21 310 18.688 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 ATC04_08265 8f0d13a3dec9baa242f5bbc388920db4 317 Gene3D G3DSA:1.10.357.140 34 187 3.3E-19 T 11-10-2018 ATC04_08265 8f0d13a3dec9baa242f5bbc388920db4 317 Pfam PF01040 UbiA prenyltransferase family 38 279 1.1E-60 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 ATC04_17145 b8fe1cf4871edfc1d2c28b1addf33916 275 SUPERFAMILY SSF53335 27 252 4.42E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_17145 b8fe1cf4871edfc1d2c28b1addf33916 275 Gene3D G3DSA:3.40.50.150 8 275 1.3E-70 T 11-10-2018 ATC04_17145 b8fe1cf4871edfc1d2c28b1addf33916 275 Pfam PF08241 Methyltransferase domain 83 186 2.9E-5 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ATC04_14875 1849de172cbae5c77444ca2920182203 701 PIRSF PIRSF038927 3 701 3.7E-279 T 11-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ATC04_14875 1849de172cbae5c77444ca2920182203 701 Pfam PF06628 Catalase-related immune-responsive 448 510 6.3E-22 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ATC04_14875 1849de172cbae5c77444ca2920182203 701 Gene3D G3DSA:1.20.1370.20 442 536 4.5E-29 T 11-10-2018 ATC04_14875 1849de172cbae5c77444ca2920182203 701 PRINTS PR00067 Catalase signature 345 371 5.8E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ATC04_14875 1849de172cbae5c77444ca2920182203 701 PRINTS PR00067 Catalase signature 103 121 5.8E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ATC04_14875 1849de172cbae5c77444ca2920182203 701 PRINTS PR00067 Catalase signature 124 141 5.8E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ATC04_14875 1849de172cbae5c77444ca2920182203 701 PRINTS PR00067 Catalase signature 313 340 5.8E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ATC04_14875 1849de172cbae5c77444ca2920182203 701 PRINTS PR00067 Catalase signature 41 64 5.8E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ATC04_14875 1849de172cbae5c77444ca2920182203 701 PRINTS PR00067 Catalase signature 143 161 5.8E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ATC04_14875 1849de172cbae5c77444ca2920182203 701 SUPERFAMILY SSF56634 17 530 2.22E-204 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ATC04_14875 1849de172cbae5c77444ca2920182203 701 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 358 366 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ATC04_14875 1849de172cbae5c77444ca2920182203 701 Gene3D G3DSA:3.40.50.880 539 701 2.5E-22 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_14875 1849de172cbae5c77444ca2920182203 701 SUPERFAMILY SSF52317 560 696 5.82E-6 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_14875 1849de172cbae5c77444ca2920182203 701 Pfam PF00199 Catalase 28 413 4.1E-164 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ATC04_14875 1849de172cbae5c77444ca2920182203 701 SMART SM01060 28 416 1.3E-247 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ATC04_14875 1849de172cbae5c77444ca2920182203 701 ProSitePatterns PS00438 Catalase proximal active site signature. 64 80 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ATC04_14875 1849de172cbae5c77444ca2920182203 701 Gene3D G3DSA:2.40.180.10 1 441 8.4E-189 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ATC04_00830 b427502702154319d563963b6c1208e1 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 24 75 4.0E-22 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00830 b427502702154319d563963b6c1208e1 79 Pfam PF01084 Ribosomal protein S18 22 71 9.6E-23 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00830 b427502702154319d563963b6c1208e1 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 24 47 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00830 b427502702154319d563963b6c1208e1 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 12 73 3.0E-23 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00830 b427502702154319d563963b6c1208e1 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 3 76 19.64 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00830 b427502702154319d563963b6c1208e1 79 SUPERFAMILY SSF46911 6 74 5.36E-25 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00830 b427502702154319d563963b6c1208e1 79 PRINTS PR00974 Ribosomal protein S18 family signature 49 63 1.6E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00830 b427502702154319d563963b6c1208e1 79 PRINTS PR00974 Ribosomal protein S18 family signature 31 41 1.6E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00830 b427502702154319d563963b6c1208e1 79 PRINTS PR00974 Ribosomal protein S18 family signature 63 73 1.6E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00830 b427502702154319d563963b6c1208e1 79 PRINTS PR00974 Ribosomal protein S18 family signature 41 48 1.6E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00830 b427502702154319d563963b6c1208e1 79 Gene3D G3DSA:4.10.640.10 1 76 1.3E-25 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_17395 d8c4ff047bf0400b0c572224eba5d3d3 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 4.2E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_17395 d8c4ff047bf0400b0c572224eba5d3d3 188 SUPERFAMILY SSF46689 8 74 2.36E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_17395 d8c4ff047bf0400b0c572224eba5d3d3 188 Gene3D G3DSA:1.10.357.10 2 187 1.1E-35 T 11-10-2018 ATC04_13760 849754daf2aa772954ae0f1703af2388 98 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 20.756 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ATC04_13760 849754daf2aa772954ae0f1703af2388 98 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 6.8E-23 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ATC04_13760 849754daf2aa772954ae0f1703af2388 98 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 21 91 5.6E-15 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ATC04_13760 849754daf2aa772954ae0f1703af2388 98 SUPERFAMILY SSF141000 4 94 9.15E-25 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 ATC04_13760 849754daf2aa772954ae0f1703af2388 98 Gene3D G3DSA:1.10.20.60 2 94 3.2E-21 T 11-10-2018 ATC04_08855 753cb9fdd6be2c0fc9c56c7aaeaba43a 161 PIRSF PIRSF005087 22 158 1.9E-46 T 11-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI ATC04_08855 753cb9fdd6be2c0fc9c56c7aaeaba43a 161 Pfam PF07972 NrdI Flavodoxin like 26 144 1.0E-41 T 11-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI ATC04_08855 753cb9fdd6be2c0fc9c56c7aaeaba43a 161 TIGRFAM TIGR00333 nrdI: nrdI protein 26 151 1.4E-36 T 11-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI ATC04_08855 753cb9fdd6be2c0fc9c56c7aaeaba43a 161 SUPERFAMILY SSF52218 25 153 4.83E-20 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ATC04_08855 753cb9fdd6be2c0fc9c56c7aaeaba43a 161 Gene3D G3DSA:3.40.50.360 24 154 7.5E-42 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ATC04_08855 753cb9fdd6be2c0fc9c56c7aaeaba43a 161 Hamap MF_00128 Protein NrdI [nrdI]. 24 154 28.659 T 11-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial ATC04_03455 fe0cb65a938f9dbc62aca9c32f188dba 346 Pfam PF00753 Metallo-beta-lactamase superfamily 29 84 1.4E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_03455 fe0cb65a938f9dbc62aca9c32f188dba 346 Gene3D G3DSA:3.60.15.10 8 345 2.9E-51 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_03455 fe0cb65a938f9dbc62aca9c32f188dba 346 Pfam PF12706 Beta-lactamase superfamily domain 189 303 4.7E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_03455 fe0cb65a938f9dbc62aca9c32f188dba 346 SUPERFAMILY SSF56281 8 335 3.36E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_04090 b0170bf49f9770712dcc22a78713460b 321 Gene3D G3DSA:1.10.10.10 5 56 6.7E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_04090 b0170bf49f9770712dcc22a78713460b 321 Pfam PF01037 Lrp/AsnC ligand binding domain 239 305 2.7E-8 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATC04_04090 b0170bf49f9770712dcc22a78713460b 321 Gene3D G3DSA:1.10.10.10 164 223 4.9E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_04090 b0170bf49f9770712dcc22a78713460b 321 SUPERFAMILY SSF54909 232 311 5.9E-9 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_04090 b0170bf49f9770712dcc22a78713460b 321 Gene3D G3DSA:3.30.70.920 224 311 1.5E-13 T 11-10-2018 ATC04_04090 b0170bf49f9770712dcc22a78713460b 321 Pfam PF13404 AsnC-type helix-turn-helix domain 173 213 1.3E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_04090 b0170bf49f9770712dcc22a78713460b 321 SUPERFAMILY SSF46785 173 220 1.59E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_04090 b0170bf49f9770712dcc22a78713460b 321 SMART SM00344 173 278 1.3E-18 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATC04_12970 bf35f31c3cc1a7702137078ee8afc910 133 Gene3D G3DSA:3.40.50.620 1 128 5.9E-25 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_12970 bf35f31c3cc1a7702137078ee8afc910 133 PRINTS PR01438 Universal stress protein signature 88 100 3.5E-7 T 11-10-2018 IPR006015 Universal stress protein A ATC04_12970 bf35f31c3cc1a7702137078ee8afc910 133 PRINTS PR01438 Universal stress protein signature 106 128 3.5E-7 T 11-10-2018 IPR006015 Universal stress protein A ATC04_12970 bf35f31c3cc1a7702137078ee8afc910 133 Pfam PF00582 Universal stress protein family 2 125 6.3E-18 T 11-10-2018 IPR006016 UspA ATC04_12970 bf35f31c3cc1a7702137078ee8afc910 133 SUPERFAMILY SSF52402 3 128 1.93E-21 T 11-10-2018 ATC04_18470 a71a5af6619438db19300fc47c8916db 69 SMART SM00530 14 68 2.1E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_18470 a71a5af6619438db19300fc47c8916db 69 Pfam PF01381 Helix-turn-helix 15 65 9.0E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_18470 a71a5af6619438db19300fc47c8916db 69 Gene3D G3DSA:1.10.260.40 7 67 3.7E-15 T 11-10-2018 ATC04_18470 a71a5af6619438db19300fc47c8916db 69 SUPERFAMILY SSF47413 11 67 1.15E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_07100 29a833ef6470140565860b8a3184e1e1 282 SMART SM00271 2 41 0.0024 T 11-10-2018 IPR001623 DnaJ domain ATC04_07100 29a833ef6470140565860b8a3184e1e1 282 SUPERFAMILY SSF46565 2 49 1.96E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily ATC04_07100 29a833ef6470140565860b8a3184e1e1 282 Gene3D G3DSA:1.10.287.110 1 76 1.2E-11 T 11-10-2018 IPR036869 Chaperone J-domain superfamily ATC04_07100 29a833ef6470140565860b8a3184e1e1 282 Pfam PF00226 DnaJ domain 2 41 7.2E-8 T 11-10-2018 IPR001623 DnaJ domain ATC04_11370 2abe6ef617b90247e8f4414c5762276a 163 Pfam PF05130 FlgN protein 3 149 4.2E-14 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 ATC04_11370 2abe6ef617b90247e8f4414c5762276a 163 SUPERFAMILY SSF140566 5 134 4.18E-7 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 ATC04_15030 88ae96d3f5d4a3f7993deacaa6d5ea44 1152 Pfam PF13087 AAA domain 955 1127 7.1E-21 T 11-10-2018 ATC04_15030 88ae96d3f5d4a3f7993deacaa6d5ea44 1152 Gene3D G3DSA:3.40.50.300 764 944 3.2E-28 T 11-10-2018 ATC04_15030 88ae96d3f5d4a3f7993deacaa6d5ea44 1152 Pfam PF13604 AAA domain 771 929 3.3E-15 T 11-10-2018 ATC04_15030 88ae96d3f5d4a3f7993deacaa6d5ea44 1152 Pfam PF13482 RNase_H superfamily 322 513 1.9E-19 T 11-10-2018 IPR038720 YprB, ribonuclease H-like domain ATC04_15030 88ae96d3f5d4a3f7993deacaa6d5ea44 1152 SUPERFAMILY SSF52540 775 1133 3.39E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15030 88ae96d3f5d4a3f7993deacaa6d5ea44 1152 TIGRFAM TIGR03491 TIGR03491: putative RecB family nuclease, TM0106 family 83 513 8.4E-58 T 11-10-2018 IPR019993 RecB family nuclease, TM0106, putative ATC04_15030 88ae96d3f5d4a3f7993deacaa6d5ea44 1152 Gene3D G3DSA:3.40.50.300 961 1146 2.9E-32 T 11-10-2018 ATC04_02525 a64db8e0d14266d31ece249a6957ec25 401 SUPERFAMILY SSF53901 249 390 4.5E-21 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_02525 a64db8e0d14266d31ece249a6957ec25 401 Gene3D G3DSA:3.40.47.10 1 400 2.3E-90 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_02525 a64db8e0d14266d31ece249a6957ec25 401 SUPERFAMILY SSF53901 33 244 8.43E-17 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_02525 a64db8e0d14266d31ece249a6957ec25 401 PIRSF PIRSF000429 23 395 4.1E-17 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_14990 2655223c5870238be24b719fcd9ba847 228 SUPERFAMILY SSF52218 3 177 1.7E-24 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ATC04_14990 2655223c5870238be24b719fcd9ba847 228 Gene3D G3DSA:3.40.50.360 1 182 4.3E-47 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ATC04_14990 2655223c5870238be24b719fcd9ba847 228 TIGRFAM TIGR04037 LLM_duo_CE1759: LLM-partnered FMN reductase, CE1759 family 5 220 3.6E-70 T 11-10-2018 IPR023932 Uncharacterised protein family, CE1759 ATC04_14990 2655223c5870238be24b719fcd9ba847 228 Pfam PF03358 NADPH-dependent FMN reductase 5 153 1.1E-29 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ATC04_08780 31d262ef0e27f53a0a7a11562e1e81ae 575 Gene3D G3DSA:3.90.700.10 241 346 1.2E-135 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_08780 31d262ef0e27f53a0a7a11562e1e81ae 575 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 1.9E-5 T 11-10-2018 ATC04_08780 31d262ef0e27f53a0a7a11562e1e81ae 575 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.9E-5 T 11-10-2018 ATC04_08780 31d262ef0e27f53a0a7a11562e1e81ae 575 Gene3D G3DSA:3.50.50.60 11 402 1.2E-135 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_08780 31d262ef0e27f53a0a7a11562e1e81ae 575 SUPERFAMILY SSF56425 232 351 2.99E-33 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_08780 31d262ef0e27f53a0a7a11562e1e81ae 575 Gene3D G3DSA:1.20.58.100 417 531 1.5E-26 T 11-10-2018 ATC04_08780 31d262ef0e27f53a0a7a11562e1e81ae 575 SUPERFAMILY SSF51905 3 413 2.85E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_08780 31d262ef0e27f53a0a7a11562e1e81ae 575 Pfam PF00890 FAD binding domain 11 391 8.6E-84 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_08780 31d262ef0e27f53a0a7a11562e1e81ae 575 SUPERFAMILY SSF46977 437 552 1.57E-30 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_08780 31d262ef0e27f53a0a7a11562e1e81ae 575 PIRSF PIRSF000171 1 559 1.0E-49 T 11-10-2018 ATC04_08780 31d262ef0e27f53a0a7a11562e1e81ae 575 Pfam PF02910 Fumarate reductase flavoprotein C-term 447 534 5.5E-17 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_08780 31d262ef0e27f53a0a7a11562e1e81ae 575 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 8.4E-6 T 11-10-2018 ATC04_08780 31d262ef0e27f53a0a7a11562e1e81ae 575 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 8.4E-6 T 11-10-2018 ATC04_15295 ac0d03df6fdbe4fca47ea1af2980e656 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 2.8E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_15295 ac0d03df6fdbe4fca47ea1af2980e656 235 Gene3D G3DSA:1.10.10.10 135 235 7.6E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_15295 ac0d03df6fdbe4fca47ea1af2980e656 235 SMART SM00862 154 229 1.4E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_15295 ac0d03df6fdbe4fca47ea1af2980e656 235 Gene3D G3DSA:3.40.50.2300 2 134 2.8E-40 T 11-10-2018 ATC04_15295 ac0d03df6fdbe4fca47ea1af2980e656 235 SMART SM00448 8 119 1.8E-44 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_15295 ac0d03df6fdbe4fca47ea1af2980e656 235 SUPERFAMILY SSF46894 130 230 3.12E-30 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_15295 ac0d03df6fdbe4fca47ea1af2980e656 235 Pfam PF00072 Response regulator receiver domain 11 120 1.1E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_15295 ac0d03df6fdbe4fca47ea1af2980e656 235 SUPERFAMILY SSF52172 7 131 9.82E-43 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_12600 3dc3d05ca1b00d6f82042ccb3fde899c 211 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 210 31.368 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ATC04_12600 3dc3d05ca1b00d6f82042ccb3fde899c 211 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 209 7.4E-60 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ATC04_12600 3dc3d05ca1b00d6f82042ccb3fde899c 211 Gene3D G3DSA:3.40.50.880 1 211 6.1E-69 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_12600 3dc3d05ca1b00d6f82042ccb3fde899c 211 Pfam PF00117 Glutamine amidotransferase class-I 8 206 2.2E-18 T 11-10-2018 IPR017926 Glutamine amidotransferase ATC04_12600 3dc3d05ca1b00d6f82042ccb3fde899c 211 PIRSF PIRSF000495 4 211 6.3E-61 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ATC04_12600 3dc3d05ca1b00d6f82042ccb3fde899c 211 SUPERFAMILY SSF52317 4 209 6.25E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_07335 a41e2cdefda014bdf9a7113a81c5e729 518 Pfam PF02875 Mur ligase family, glutamate ligase domain 354 419 5.7E-9 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ATC04_07335 a41e2cdefda014bdf9a7113a81c5e729 518 Gene3D G3DSA:3.90.190.20 353 502 2.0E-35 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATC04_07335 a41e2cdefda014bdf9a7113a81c5e729 518 SUPERFAMILY SSF53623 141 349 1.31E-44 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATC04_07335 a41e2cdefda014bdf9a7113a81c5e729 518 Gene3D G3DSA:3.40.1190.10 124 351 8.4E-49 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATC04_07335 a41e2cdefda014bdf9a7113a81c5e729 518 Pfam PF08245 Mur ligase middle domain 146 331 1.2E-22 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ATC04_07335 a41e2cdefda014bdf9a7113a81c5e729 518 SUPERFAMILY SSF51984 23 124 1.83E-15 T 11-10-2018 ATC04_07335 a41e2cdefda014bdf9a7113a81c5e729 518 SUPERFAMILY SSF53244 353 506 1.28E-34 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATC04_07335 a41e2cdefda014bdf9a7113a81c5e729 518 Gene3D G3DSA:3.40.50.720 22 122 1.1E-15 T 11-10-2018 ATC04_07335 a41e2cdefda014bdf9a7113a81c5e729 518 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 27 506 31.712 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATC04_07335 a41e2cdefda014bdf9a7113a81c5e729 518 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 28 504 8.0E-116 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATC04_16560 5fb0390e41943fffa99037e35411393c 450 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 10 429 4.9E-148 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 ATC04_16560 5fb0390e41943fffa99037e35411393c 450 PIRSF PIRSF000337 4 444 3.8E-139 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 ATC04_16560 5fb0390e41943fffa99037e35411393c 450 SUPERFAMILY SSF51679 6 435 7.2E-112 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_16560 5fb0390e41943fffa99037e35411393c 450 Gene3D G3DSA:3.20.20.30 1 445 3.0E-139 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_16560 5fb0390e41943fffa99037e35411393c 450 Pfam PF00296 Luciferase-like monooxygenase 29 385 6.0E-56 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ATC04_09115 4ccbe8133db3dc157ca9b2edc9278ecc 199 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 110 129 1.0E-32 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATC04_09115 4ccbe8133db3dc157ca9b2edc9278ecc 199 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 142 154 1.0E-32 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATC04_09115 4ccbe8133db3dc157ca9b2edc9278ecc 199 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 6 19 1.0E-32 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATC04_09115 4ccbe8133db3dc157ca9b2edc9278ecc 199 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 64 80 1.0E-32 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATC04_09115 4ccbe8133db3dc157ca9b2edc9278ecc 199 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 86 102 1.0E-32 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATC04_09115 4ccbe8133db3dc157ca9b2edc9278ecc 199 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 5 157 1.4E-29 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATC04_09115 4ccbe8133db3dc157ca9b2edc9278ecc 199 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 116 151 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 ATC04_09115 4ccbe8133db3dc157ca9b2edc9278ecc 199 Gene3D G3DSA:3.30.420.10 3 162 1.5E-46 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_09115 4ccbe8133db3dc157ca9b2edc9278ecc 199 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 3 157 39.464 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATC04_09115 4ccbe8133db3dc157ca9b2edc9278ecc 199 SUPERFAMILY SSF53098 3 157 1.71E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_09115 4ccbe8133db3dc157ca9b2edc9278ecc 199 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 5 154 2.0E-46 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATC04_04175 1d0dac8269362fa28b028e77a5138169 183 Gene3D G3DSA:3.10.129.10 25 141 1.1E-15 T 11-10-2018 ATC04_04175 1d0dac8269362fa28b028e77a5138169 183 Pfam PF13279 Thioesterase-like superfamily 34 137 2.9E-15 T 11-10-2018 ATC04_04175 1d0dac8269362fa28b028e77a5138169 183 SUPERFAMILY SSF54637 6 133 5.4E-23 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 Gene3D G3DSA:3.30.230.10 323 459 7.8E-16 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 SMART SM00382 90 244 3.5E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 PRINTS PR01874 DNA repair protein radA signature 213 241 1.7E-79 T 11-10-2018 ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 PRINTS PR01874 DNA repair protein radA signature 322 345 1.7E-79 T 11-10-2018 ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 PRINTS PR01874 DNA repair protein radA signature 174 198 1.7E-79 T 11-10-2018 ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 PRINTS PR01874 DNA repair protein radA signature 16 40 1.7E-79 T 11-10-2018 ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 PRINTS PR01874 DNA repair protein radA signature 82 110 1.7E-79 T 11-10-2018 ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 PRINTS PR01874 DNA repair protein radA signature 248 274 1.7E-79 T 11-10-2018 ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 PRINTS PR01874 DNA repair protein radA signature 124 141 1.7E-79 T 11-10-2018 ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 Pfam PF13481 AAA domain 81 222 1.0E-14 T 11-10-2018 ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 Gene3D G3DSA:3.40.50.300 67 284 1.3E-37 T 11-10-2018 ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 TIGRFAM TIGR00416 sms: DNA repair protein RadA 9 452 1.6E-150 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 SUPERFAMILY SSF54211 255 457 1.25E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 SUPERFAMILY SSF52540 71 292 2.06E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_17460 8324fff5770f0ecf22dfdcba06091531 464 Hamap MF_01498 DNA repair protein RadA [radA]. 27 456 40.275 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 ATC04_03505 d7cf580dda7980ef1b09b64debf94fb0 460 Pfam PF07690 Major Facilitator Superfamily 264 430 9.4E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_03505 d7cf580dda7980ef1b09b64debf94fb0 460 Gene3D G3DSA:1.20.1250.20 15 447 1.5E-69 T 11-10-2018 ATC04_03505 d7cf580dda7980ef1b09b64debf94fb0 460 Pfam PF00083 Sugar (and other) transporter 18 232 6.6E-25 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_03505 d7cf580dda7980ef1b09b64debf94fb0 460 ProSitePatterns PS00217 Sugar transport proteins signature 2. 129 154 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_03505 d7cf580dda7980ef1b09b64debf94fb0 460 SUPERFAMILY SSF103473 7 439 5.49E-64 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_07080 61ab59a8470e56d3b4e508e2cf0786db 314 Gene3D G3DSA:3.40.50.620 2 171 2.2E-18 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_07080 61ab59a8470e56d3b4e508e2cf0786db 314 PIRSF PIRSF000089 1 314 1.2E-73 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 ATC04_07080 61ab59a8470e56d3b4e508e2cf0786db 314 Gene3D G3DSA:3.40.50.1220 185 314 1.6E-47 T 11-10-2018 ATC04_07080 61ab59a8470e56d3b4e508e2cf0786db 314 SUPERFAMILY SSF52402 5 171 8.37E-19 T 11-10-2018 ATC04_07080 61ab59a8470e56d3b4e508e2cf0786db 314 SMART SM00893 4 189 0.0035 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_07080 61ab59a8470e56d3b4e508e2cf0786db 314 SUPERFAMILY SSF52467 191 306 4.0E-40 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ATC04_07080 61ab59a8470e56d3b4e508e2cf0786db 314 Pfam PF01012 Electron transfer flavoprotein domain 17 167 3.6E-14 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_07080 61ab59a8470e56d3b4e508e2cf0786db 314 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 192 272 2.3E-30 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 ATC04_17245 ef4b1b31fa2813189aed0400a9efe802 158 SUPERFAMILY SSF46785 23 142 2.89E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_17245 ef4b1b31fa2813189aed0400a9efe802 158 Gene3D G3DSA:1.10.10.10 4 142 1.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_17245 ef4b1b31fa2813189aed0400a9efe802 158 Pfam PF12802 MarR family 37 92 1.1E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_17245 ef4b1b31fa2813189aed0400a9efe802 158 SMART SM00347 30 130 4.0E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_16165 50facbfd9d8d9c8a6a3ac772dfed189f 1554 SMART SM00490 343 421 2.3E-9 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_16165 50facbfd9d8d9c8a6a3ac772dfed189f 1554 SMART SM00382 36 321 0.0037 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_16165 50facbfd9d8d9c8a6a3ac772dfed189f 1554 Pfam PF00271 Helicase conserved C-terminal domain 353 421 8.5E-11 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_16165 50facbfd9d8d9c8a6a3ac772dfed189f 1554 SMART SM00487 19 254 1.7E-32 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_16165 50facbfd9d8d9c8a6a3ac772dfed189f 1554 Gene3D G3DSA:3.40.50.300 7 237 1.1E-56 T 11-10-2018 ATC04_16165 50facbfd9d8d9c8a6a3ac772dfed189f 1554 Pfam PF06224 Winged helix DNA-binding domain 916 1082 1.5E-8 T 11-10-2018 IPR009351 Protein of unknown function DUF1006 ATC04_16165 50facbfd9d8d9c8a6a3ac772dfed189f 1554 SUPERFAMILY SSF52540 35 425 1.72E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16165 50facbfd9d8d9c8a6a3ac772dfed189f 1554 Pfam PF08494 DEAD/H associated 685 873 2.4E-71 T 11-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 ATC04_16165 50facbfd9d8d9c8a6a3ac772dfed189f 1554 Gene3D G3DSA:3.40.50.300 282 440 5.3E-23 T 11-10-2018 ATC04_16165 50facbfd9d8d9c8a6a3ac772dfed189f 1554 Pfam PF00270 DEAD/DEAH box helicase 25 219 6.4E-26 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATC04_04485 65f4c163cbea3849b5e59b3e02ee77c0 373 Gene3D G3DSA:3.30.1360.120 9 244 7.4E-85 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ATC04_04485 65f4c163cbea3849b5e59b3e02ee77c0 373 Pfam PF01571 Aminomethyltransferase folate-binding domain 11 266 2.9E-90 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain ATC04_04485 65f4c163cbea3849b5e59b3e02ee77c0 373 Gene3D G3DSA:4.10.1250.10 246 287 5.1E-15 T 11-10-2018 ATC04_04485 65f4c163cbea3849b5e59b3e02ee77c0 373 SUPERFAMILY SSF103025 7 287 4.55E-93 T 11-10-2018 ATC04_04485 65f4c163cbea3849b5e59b3e02ee77c0 373 SUPERFAMILY SSF101790 283 370 1.08E-23 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal ATC04_04485 65f4c163cbea3849b5e59b3e02ee77c0 373 Gene3D G3DSA:3.30.70.1400 55 141 7.4E-85 T 11-10-2018 ATC04_04485 65f4c163cbea3849b5e59b3e02ee77c0 373 Gene3D G3DSA:2.40.30.110 290 371 6.4E-28 T 11-10-2018 ATC04_04485 65f4c163cbea3849b5e59b3e02ee77c0 373 Hamap MF_00259 Aminomethyltransferase [gcvT]. 5 371 41.917 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ATC04_04485 65f4c163cbea3849b5e59b3e02ee77c0 373 PIRSF PIRSF006487 1 373 2.9E-97 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 ATC04_04485 65f4c163cbea3849b5e59b3e02ee77c0 373 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 274 365 2.5E-23 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ATC04_04485 65f4c163cbea3849b5e59b3e02ee77c0 373 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 7 370 9.1E-106 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 ATC04_02780 3169cd04c8e5e191828b1aba4d8757f9 127 SMART SM00347 8 108 9.9E-20 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_02780 3169cd04c8e5e191828b1aba4d8757f9 127 Gene3D G3DSA:1.10.10.10 2 124 7.7E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_02780 3169cd04c8e5e191828b1aba4d8757f9 127 Pfam PF01047 MarR family 15 71 8.6E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_02780 3169cd04c8e5e191828b1aba4d8757f9 127 SUPERFAMILY SSF46785 6 120 3.96E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_02780 3169cd04c8e5e191828b1aba4d8757f9 127 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 64 3.3E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_02780 3169cd04c8e5e191828b1aba4d8757f9 127 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 84 3.3E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_02780 3169cd04c8e5e191828b1aba4d8757f9 127 PRINTS PR00598 Bacterial regulatory protein MarR family signature 32 48 3.3E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_02780 3169cd04c8e5e191828b1aba4d8757f9 127 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 118 3.3E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_16290 da6c7a7cdff96aeaf2b83ce4719d0cc7 394 Pfam PF07730 Histidine kinase 185 248 1.2E-13 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ATC04_16290 da6c7a7cdff96aeaf2b83ce4719d0cc7 394 SUPERFAMILY SSF55874 298 383 2.8E-8 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_16290 da6c7a7cdff96aeaf2b83ce4719d0cc7 394 Gene3D G3DSA:3.30.565.10 270 393 1.1E-20 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 244 1.1E-55 T 11-10-2018 ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 8.2E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 8.2E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 8.2E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.2E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 8.2E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 8.2E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 Gene3D G3DSA:3.40.50.720 3 254 2.0E-71 T 11-10-2018 ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 SUPERFAMILY SSF51735 8 244 1.55E-71 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01400 3b1db2a491a714fa0f764e82161ee071 271 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 189 0.002 T 11-10-2018 ATC04_12275 48bf0b7e3851490b4188b56e1fe319ea 236 Pfam PF02224 Cytidylate kinase 21 231 5.8E-54 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 ATC04_12275 48bf0b7e3851490b4188b56e1fe319ea 236 Gene3D G3DSA:3.40.50.300 11 235 1.6E-66 T 11-10-2018 ATC04_12275 48bf0b7e3851490b4188b56e1fe319ea 236 TIGRFAM TIGR00017 cmk: cytidylate kinase 18 228 8.2E-51 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 ATC04_12275 48bf0b7e3851490b4188b56e1fe319ea 236 Hamap MF_00238 Cytidylate kinase [cmk]. 19 234 25.617 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 ATC04_12275 48bf0b7e3851490b4188b56e1fe319ea 236 SUPERFAMILY SSF52540 19 232 1.19E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06965 e4101dfc4c65d2beedde9e1fcb82df51 284 Gene3D G3DSA:3.40.190.10 45 281 6.2E-71 T 11-10-2018 ATC04_06965 e4101dfc4c65d2beedde9e1fcb82df51 284 Pfam PF03180 NLPA lipoprotein 44 284 2.8E-59 T 11-10-2018 IPR004872 Lipoprotein NlpA family ATC04_06965 e4101dfc4c65d2beedde9e1fcb82df51 284 Gene3D G3DSA:3.40.190.10 126 233 6.2E-71 T 11-10-2018 ATC04_06965 e4101dfc4c65d2beedde9e1fcb82df51 284 SUPERFAMILY SSF53850 44 284 3.47E-49 T 11-10-2018 ATC04_08380 8739e65e437e626b7820d35bd0462eb9 174 PIRSF PIRSF002070 16 171 7.7E-22 T 11-10-2018 ATC04_08380 8739e65e437e626b7820d35bd0462eb9 174 Pfam PF00436 Single-strand binding protein family 22 118 6.4E-19 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 ATC04_08380 8739e65e437e626b7820d35bd0462eb9 174 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 23 123 2.1E-16 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ATC04_08380 8739e65e437e626b7820d35bd0462eb9 174 SUPERFAMILY SSF50249 18 141 6.85E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_08380 8739e65e437e626b7820d35bd0462eb9 174 Gene3D G3DSA:2.40.50.140 10 134 1.3E-30 T 11-10-2018 ATC04_11590 a584a93ce66958771aa70310317c9576 313 Gene3D G3DSA:1.10.4080.10 92 305 1.9E-5 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily ATC04_11590 a584a93ce66958771aa70310317c9576 313 SUPERFAMILY SSF101478 127 210 6.15E-6 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily ATC04_16205 b72a050a132c593c6e4b3b61c560b6b0 432 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 15 414 45.276 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ATC04_16205 b72a050a132c593c6e4b3b61c560b6b0 432 Gene3D G3DSA:3.20.20.105 10 419 1.7E-146 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ATC04_16205 b72a050a132c593c6e4b3b61c560b6b0 432 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 32 414 6.2E-123 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ATC04_16205 b72a050a132c593c6e4b3b61c560b6b0 432 SUPERFAMILY SSF51713 30 415 2.62E-131 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ATC04_16205 b72a050a132c593c6e4b3b61c560b6b0 432 Pfam PF01702 Queuine tRNA-ribosyltransferase 174 410 1.2E-80 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ATC04_16205 b72a050a132c593c6e4b3b61c560b6b0 432 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 33 413 9.5E-125 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ATC04_16860 1d4792a77575d27c1a0b8e5c78cddef0 291 Gene3D G3DSA:3.40.190.10 162 265 1.4E-51 T 11-10-2018 ATC04_16860 1d4792a77575d27c1a0b8e5c78cddef0 291 SUPERFAMILY SSF46785 1 84 1.25E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_16860 1d4792a77575d27c1a0b8e5c78cddef0 291 SUPERFAMILY SSF53850 88 289 1.52E-35 T 11-10-2018 ATC04_16860 1d4792a77575d27c1a0b8e5c78cddef0 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_16860 1d4792a77575d27c1a0b8e5c78cddef0 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_16860 1d4792a77575d27c1a0b8e5c78cddef0 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_16860 1d4792a77575d27c1a0b8e5c78cddef0 291 Pfam PF03466 LysR substrate binding domain 88 288 4.3E-38 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_16860 1d4792a77575d27c1a0b8e5c78cddef0 291 Gene3D G3DSA:1.10.10.10 1 86 1.4E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16860 1d4792a77575d27c1a0b8e5c78cddef0 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_16860 1d4792a77575d27c1a0b8e5c78cddef0 291 Gene3D G3DSA:3.40.190.10 90 277 1.4E-51 T 11-10-2018 ATC04_06810 ad582fecfd20cb03eb4d84cf3f0272b5 361 TIGRFAM TIGR01900 dapE-gram_pos: succinyl-diaminopimelate desuccinylase 10 360 3.1E-156 T 11-10-2018 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 ATC04_06810 ad582fecfd20cb03eb4d84cf3f0272b5 361 SUPERFAMILY SSF55031 176 277 1.94E-20 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ATC04_06810 ad582fecfd20cb03eb4d84cf3f0272b5 361 Pfam PF07687 Peptidase dimerisation domain 176 272 5.4E-16 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ATC04_06810 ad582fecfd20cb03eb4d84cf3f0272b5 361 Gene3D G3DSA:3.30.70.360 176 284 2.2E-97 T 11-10-2018 ATC04_06810 ad582fecfd20cb03eb4d84cf3f0272b5 361 SUPERFAMILY SSF53187 15 355 3.55E-41 T 11-10-2018 ATC04_06810 ad582fecfd20cb03eb4d84cf3f0272b5 361 Gene3D G3DSA:3.40.630.10 20 349 2.2E-97 T 11-10-2018 ATC04_06810 ad582fecfd20cb03eb4d84cf3f0272b5 361 Pfam PF01546 Peptidase family M20/M25/M40 70 357 5.8E-22 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ATC04_05140 3e798074c7dccb702d8f67d3b4b60316 554 Gene3D G3DSA:1.10.150.20 334 471 2.1E-22 T 11-10-2018 ATC04_05140 3e798074c7dccb702d8f67d3b4b60316 554 Pfam PF00476 DNA polymerase family A 221 552 6.6E-27 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_05140 3e798074c7dccb702d8f67d3b4b60316 554 Gene3D G3DSA:3.30.70.370 297 550 2.1E-22 T 11-10-2018 ATC04_05140 3e798074c7dccb702d8f67d3b4b60316 554 SMART SM00482 311 513 3.6E-10 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_05140 3e798074c7dccb702d8f67d3b4b60316 554 SUPERFAMILY SSF56672 155 554 1.67E-59 T 11-10-2018 ATC04_11425 440e9112e2c1696485fda5b7cd88bf01 284 Gene3D G3DSA:3.90.1170.20 16 279 5.2E-95 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 ATC04_11425 440e9112e2c1696485fda5b7cd88bf01 284 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 112 280 1.1E-53 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 ATC04_11425 440e9112e2c1696485fda5b7cd88bf01 284 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 22 110 2.0E-22 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 ATC04_11425 440e9112e2c1696485fda5b7cd88bf01 284 SUPERFAMILY SSF51690 112 281 3.41E-52 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ATC04_11425 440e9112e2c1696485fda5b7cd88bf01 284 PIRSF PIRSF006250 6 284 1.7E-81 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 ATC04_11425 440e9112e2c1696485fda5b7cd88bf01 284 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 14 281 4.2E-89 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 ATC04_11425 440e9112e2c1696485fda5b7cd88bf01 284 SUPERFAMILY SSF54675 4 110 7.85E-28 T 11-10-2018 ATC04_11425 440e9112e2c1696485fda5b7cd88bf01 284 Gene3D G3DSA:3.20.20.70 126 271 5.2E-95 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_02000 d802b546cf94c55f9d160120cc14b46c 597 SUPERFAMILY SSF52518 3 183 1.75E-48 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_02000 d802b546cf94c55f9d160120cc14b46c 597 Gene3D G3DSA:3.40.50.970 359 581 4.8E-63 T 11-10-2018 ATC04_02000 d802b546cf94c55f9d160120cc14b46c 597 Gene3D G3DSA:3.40.50.1220 192 355 1.3E-43 T 11-10-2018 ATC04_02000 d802b546cf94c55f9d160120cc14b46c 597 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 4.9E-32 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ATC04_02000 d802b546cf94c55f9d160120cc14b46c 597 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 4.4E-51 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ATC04_02000 d802b546cf94c55f9d160120cc14b46c 597 SUPERFAMILY SSF52518 368 563 3.69E-49 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_02000 d802b546cf94c55f9d160120cc14b46c 597 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 552 5.8E-33 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ATC04_02000 d802b546cf94c55f9d160120cc14b46c 597 SUPERFAMILY SSF52467 160 347 8.66E-42 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ATC04_02000 d802b546cf94c55f9d160120cc14b46c 597 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 587 0.0 T 11-10-2018 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47 ATC04_02000 d802b546cf94c55f9d160120cc14b46c 597 Gene3D G3DSA:3.40.50.970 2 170 4.2E-62 T 11-10-2018 ATC04_06285 749d90819284723eabfb255e1de86416 464 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 179 2.7E-56 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATC04_06285 749d90819284723eabfb255e1de86416 464 PIRSF PIRSF500134 3 443 8.5E-148 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 ATC04_06285 749d90819284723eabfb255e1de86416 464 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 4 423 4.8E-129 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ATC04_06285 749d90819284723eabfb255e1de86416 464 SUPERFAMILY SSF48179 208 307 1.87E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_06285 749d90819284723eabfb255e1de86416 464 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 327 427 3.5E-29 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATC04_06285 749d90819284723eabfb255e1de86416 464 Gene3D G3DSA:3.40.50.720 239 454 4.4E-64 T 11-10-2018 ATC04_06285 749d90819284723eabfb255e1de86416 464 PIRSF PIRSF000124 3 442 1.5E-120 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ATC04_06285 749d90819284723eabfb255e1de86416 464 SUPERFAMILY SSF52413 317 436 7.46E-35 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 ATC04_06285 749d90819284723eabfb255e1de86416 464 Gene3D G3DSA:1.20.5.100 208 238 2.0E-12 T 11-10-2018 ATC04_06285 749d90819284723eabfb255e1de86416 464 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 301 1.2E-29 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATC04_06285 749d90819284723eabfb255e1de86416 464 Gene3D G3DSA:3.40.50.720 1 206 8.4E-67 T 11-10-2018 ATC04_06285 749d90819284723eabfb255e1de86416 464 SMART SM00984 326 427 8.7E-41 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATC04_06285 749d90819284723eabfb255e1de86416 464 SUPERFAMILY SSF51735 4 194 2.63E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 323 414 7.3E-24 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 SUPERFAMILY SSF52440 2 100 1.21E-31 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 Gene3D G3DSA:3.40.50.20 1 93 2.5E-32 T 11-10-2018 ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 Gene3D G3DSA:3.90.600.10 322 418 4.9E-27 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 2 416 3.0E-147 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 417 39.889 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 281 288 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 Gene3D G3DSA:3.30.470.20 183 321 3.0E-52 T 11-10-2018 ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 Gene3D G3DSA:3.30.1490.20 121 182 1.7E-18 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 SUPERFAMILY SSF56059 102 313 1.11E-55 T 11-10-2018 ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 SMART SM01210 322 417 4.3E-40 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 SMART SM01209 101 287 1.0E-117 T 11-10-2018 ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 100 4.9E-31 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 287 4.1E-66 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATC04_05065 c8fb1b295b7f9eb39630eafc205e1528 428 SUPERFAMILY SSF51246 321 416 1.62E-25 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ATC04_04790 5d66049c3ecac5b7e21f7f725c7c1c0f 413 SUPERFAMILY SSF103473 15 396 2.49E-50 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_04790 5d66049c3ecac5b7e21f7f725c7c1c0f 413 Gene3D G3DSA:1.20.1250.20 13 392 5.1E-42 T 11-10-2018 ATC04_04790 5d66049c3ecac5b7e21f7f725c7c1c0f 413 Pfam PF05977 Transmembrane secretion effector 13 394 4.7E-57 T 11-10-2018 IPR010290 Transmembrane secretion effector ATC04_08125 6553e6b6643bd784e43c90340c20952b 263 Gene3D G3DSA:3.40.50.150 8 258 1.8E-77 T 11-10-2018 ATC04_08125 6553e6b6643bd784e43c90340c20952b 263 SUPERFAMILY SSF53335 14 228 5.32E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_08125 6553e6b6643bd784e43c90340c20952b 263 Pfam PF13649 Methyltransferase domain 34 124 4.2E-14 T 11-10-2018 ATC04_08125 6553e6b6643bd784e43c90340c20952b 263 Gene3D G3DSA:1.10.150.290 133 238 1.8E-77 T 11-10-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 ATC04_08125 6553e6b6643bd784e43c90340c20952b 263 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 1 262 41.259 T 11-10-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 ATC04_01775 8e346d9eea1c43033f1271b1d41a4777 538 Gene3D G3DSA:3.40.50.12780 4 427 2.4E-121 T 11-10-2018 ATC04_01775 8e346d9eea1c43033f1271b1d41a4777 538 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 521 2.0E-16 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ATC04_01775 8e346d9eea1c43033f1271b1d41a4777 538 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_01775 8e346d9eea1c43033f1271b1d41a4777 538 Gene3D G3DSA:3.30.300.310 432 536 2.0E-32 T 11-10-2018 ATC04_01775 8e346d9eea1c43033f1271b1d41a4777 538 Pfam PF00501 AMP-binding enzyme 23 436 8.9E-109 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_01775 8e346d9eea1c43033f1271b1d41a4777 538 SUPERFAMILY SSF56801 15 533 3.01E-156 T 11-10-2018 ATC04_13970 e30224668781827c0c9d932ae970750c 572 Gene3D G3DSA:3.40.120.10 46 207 7.2E-41 T 11-10-2018 ATC04_13970 e30224668781827c0c9d932ae970750c 572 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 56 173 1.6E-34 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_13970 e30224668781827c0c9d932ae970750c 572 Gene3D G3DSA:3.40.120.10 341 455 3.7E-24 T 11-10-2018 ATC04_13970 e30224668781827c0c9d932ae970750c 572 SUPERFAMILY SSF53738 321 455 2.63E-26 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_13970 e30224668781827c0c9d932ae970750c 572 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 243 331 2.1E-24 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_13970 e30224668781827c0c9d932ae970750c 572 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 341 446 5.1E-14 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_13970 e30224668781827c0c9d932ae970750c 572 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 153 162 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_13970 e30224668781827c0c9d932ae970750c 572 SUPERFAMILY SSF53738 230 333 9.42E-22 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_13970 e30224668781827c0c9d932ae970750c 572 Gene3D G3DSA:3.40.120.10 228 340 1.7E-22 T 11-10-2018 ATC04_13970 e30224668781827c0c9d932ae970750c 572 Gene3D G3DSA:3.30.310.50 460 560 3.5E-7 T 11-10-2018 ATC04_13970 e30224668781827c0c9d932ae970750c 572 SUPERFAMILY SSF55957 456 556 3.66E-13 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_13970 e30224668781827c0c9d932ae970750c 572 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 152 166 3.1E-10 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_13970 e30224668781827c0c9d932ae970750c 572 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 246 265 3.1E-10 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_13970 e30224668781827c0c9d932ae970750c 572 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 313 328 3.1E-10 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_13970 e30224668781827c0c9d932ae970750c 572 SUPERFAMILY SSF53738 49 197 5.49E-36 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_13970 e30224668781827c0c9d932ae970750c 572 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 507 553 4.2E-8 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_00235 8e06aa15e5ede6da3ca68fdc3cdac615 192 Gene3D G3DSA:3.30.1130.10 58 190 2.9E-58 T 11-10-2018 ATC04_00235 8e06aa15e5ede6da3ca68fdc3cdac615 192 Gene3D G3DSA:1.10.286.10 1 57 3.4E-23 T 11-10-2018 ATC04_00235 8e06aa15e5ede6da3ca68fdc3cdac615 192 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 8 190 41.21 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ATC04_00235 8e06aa15e5ede6da3ca68fdc3cdac615 192 SUPERFAMILY SSF55620 6 189 2.0E-76 T 11-10-2018 ATC04_00235 8e06aa15e5ede6da3ca68fdc3cdac615 192 Pfam PF01227 GTP cyclohydrolase I 12 189 3.1E-77 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ATC04_00235 8e06aa15e5ede6da3ca68fdc3cdac615 192 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 68 84 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ATC04_00235 8e06aa15e5ede6da3ca68fdc3cdac615 192 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 118 128 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ATC04_00235 8e06aa15e5ede6da3ca68fdc3cdac615 192 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 12 189 6.7E-75 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ATC04_07835 2ec9b92d22c8a2710793ac97c344d823 187 PRINTS PR01576 Peptide deformylase signature 33 62 3.1E-32 T 11-10-2018 IPR023635 Peptide deformylase ATC04_07835 2ec9b92d22c8a2710793ac97c344d823 187 PRINTS PR01576 Peptide deformylase signature 87 98 3.1E-32 T 11-10-2018 IPR023635 Peptide deformylase ATC04_07835 2ec9b92d22c8a2710793ac97c344d823 187 PRINTS PR01576 Peptide deformylase signature 118 147 3.1E-32 T 11-10-2018 IPR023635 Peptide deformylase ATC04_07835 2ec9b92d22c8a2710793ac97c344d823 187 PRINTS PR01576 Peptide deformylase signature 99 117 3.1E-32 T 11-10-2018 IPR023635 Peptide deformylase ATC04_07835 2ec9b92d22c8a2710793ac97c344d823 187 Pfam PF01327 Polypeptide deformylase 6 150 1.4E-43 T 11-10-2018 IPR023635 Peptide deformylase ATC04_07835 2ec9b92d22c8a2710793ac97c344d823 187 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 9 150 3.0E-36 T 11-10-2018 IPR023635 Peptide deformylase ATC04_07835 2ec9b92d22c8a2710793ac97c344d823 187 PIRSF PIRSF004749 1 174 1.2E-44 T 11-10-2018 IPR023635 Peptide deformylase ATC04_07835 2ec9b92d22c8a2710793ac97c344d823 187 Hamap MF_00163 Peptide deformylase [def]. 2 160 27.614 T 11-10-2018 IPR023635 Peptide deformylase ATC04_07835 2ec9b92d22c8a2710793ac97c344d823 187 SUPERFAMILY SSF56420 1 157 6.15E-52 T 11-10-2018 IPR036821 Peptide deformylase superfamily ATC04_07835 2ec9b92d22c8a2710793ac97c344d823 187 Gene3D G3DSA:3.90.45.10 1 178 4.2E-55 T 11-10-2018 IPR036821 Peptide deformylase superfamily ATC04_04975 185b4c21e9c8a65a4d6b0d9c432f1b79 142 SUPERFAMILY SSF46955 11 100 5.49E-19 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_04975 185b4c21e9c8a65a4d6b0d9c432f1b79 142 SMART SM00422 10 78 9.8E-25 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_04975 185b4c21e9c8a65a4d6b0d9c432f1b79 142 Gene3D G3DSA:1.10.1660.10 4 79 2.0E-21 T 11-10-2018 ATC04_04975 185b4c21e9c8a65a4d6b0d9c432f1b79 142 Pfam PF13411 MerR HTH family regulatory protein 12 76 1.1E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_07665 cf3983198b67807d7f4606049aefe94c 826 Gene3D G3DSA:3.50.50.60 468 567 2.8E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_07665 cf3983198b67807d7f4606049aefe94c 826 Pfam PF13450 NAD(P)-binding Rossmann-like domain 18 49 3.7E-5 T 11-10-2018 ATC04_07665 cf3983198b67807d7f4606049aefe94c 826 Pfam PF05199 GMC oxidoreductase 494 559 1.5E-15 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 ATC04_07665 cf3983198b67807d7f4606049aefe94c 826 Gene3D G3DSA:3.50.50.60 190 370 1.5E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_07665 cf3983198b67807d7f4606049aefe94c 826 Gene3D G3DSA:3.50.50.60 12 184 1.6E-24 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_07665 cf3983198b67807d7f4606049aefe94c 826 SUPERFAMILY SSF51905 11 566 2.92E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_09800 762fe159a339f4fc11f9d0d9c438cc57 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 75 7.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_09800 762fe159a339f4fc11f9d0d9c438cc57 214 Gene3D G3DSA:1.10.357.10 15 213 9.3E-24 T 11-10-2018 ATC04_09800 762fe159a339f4fc11f9d0d9c438cc57 214 SUPERFAMILY SSF48498 97 189 2.0E-5 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_09800 762fe159a339f4fc11f9d0d9c438cc57 214 SUPERFAMILY SSF46689 18 91 1.33E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_02110 0b540f896e68014c52e724b9002df049 500 Pfam PF00171 Aldehyde dehydrogenase family 30 495 4.9E-152 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_02110 0b540f896e68014c52e724b9002df049 500 SUPERFAMILY SSF53720 15 497 3.53E-148 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_02110 0b540f896e68014c52e724b9002df049 500 Gene3D G3DSA:3.40.605.10 38 493 5.9E-157 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_02110 0b540f896e68014c52e724b9002df049 500 Gene3D G3DSA:3.40.309.10 275 469 5.9E-157 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_00640 0fea97d0add8ee1609be57c2020c66b2 387 ProSitePatterns PS00618 RecF protein signature 2. 330 348 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 ATC04_00640 0fea97d0add8ee1609be57c2020c66b2 387 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 ATC04_00640 0fea97d0add8ee1609be57c2020c66b2 387 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 387 87.37 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 ATC04_00640 0fea97d0add8ee1609be57c2020c66b2 387 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 372 1.0E-103 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 ATC04_00640 0fea97d0add8ee1609be57c2020c66b2 387 Gene3D G3DSA:3.40.50.300 6 362 5.6E-92 T 11-10-2018 ATC04_00640 0fea97d0add8ee1609be57c2020c66b2 387 SUPERFAMILY SSF52540 2 355 1.06E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_00640 0fea97d0add8ee1609be57c2020c66b2 387 Gene3D G3DSA:1.20.1050.90 120 329 5.6E-92 T 11-10-2018 ATC04_00640 0fea97d0add8ee1609be57c2020c66b2 387 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 363 3.9E-17 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal ATC04_05615 fc207c45567b00688e7ddf0f2a0ab673 629 Pfam PF00271 Helicase conserved C-terminal domain 248 356 1.8E-28 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_05615 fc207c45567b00688e7ddf0f2a0ab673 629 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 170 178 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ATC04_05615 fc207c45567b00688e7ddf0f2a0ab673 629 Pfam PF03880 DbpA RNA binding domain 495 564 6.4E-19 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain ATC04_05615 fc207c45567b00688e7ddf0f2a0ab673 629 Gene3D G3DSA:3.40.50.300 2 228 5.5E-76 T 11-10-2018 ATC04_05615 fc207c45567b00688e7ddf0f2a0ab673 629 Pfam PF00270 DEAD/DEAH box helicase 41 212 7.5E-49 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATC04_05615 fc207c45567b00688e7ddf0f2a0ab673 629 Gene3D G3DSA:3.30.70.330 495 566 1.8E-10 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ATC04_05615 fc207c45567b00688e7ddf0f2a0ab673 629 SMART SM00490 275 356 2.0E-34 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_05615 fc207c45567b00688e7ddf0f2a0ab673 629 Gene3D G3DSA:3.40.50.300 231 447 2.9E-52 T 11-10-2018 ATC04_05615 fc207c45567b00688e7ddf0f2a0ab673 629 SUPERFAMILY SSF52540 91 377 2.44E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_05615 fc207c45567b00688e7ddf0f2a0ab673 629 SMART SM00487 35 239 1.0E-59 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_05615 fc207c45567b00688e7ddf0f2a0ab673 629 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 11 566 44.431 T 11-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 ATC04_16870 c8cb7798dbfae605cb8ebc88e2afe54d 414 PIRSF PIRSF001235 13 414 1.3E-107 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ATC04_16870 c8cb7798dbfae605cb8ebc88e2afe54d 414 SUPERFAMILY SSF55031 222 333 5.06E-24 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ATC04_16870 c8cb7798dbfae605cb8ebc88e2afe54d 414 Pfam PF01546 Peptidase family M20/M25/M40 86 410 2.4E-23 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ATC04_16870 c8cb7798dbfae605cb8ebc88e2afe54d 414 SUPERFAMILY SSF53187 23 412 1.74E-58 T 11-10-2018 ATC04_16870 c8cb7798dbfae605cb8ebc88e2afe54d 414 Gene3D G3DSA:3.40.630.10 31 407 2.0E-109 T 11-10-2018 ATC04_16870 c8cb7798dbfae605cb8ebc88e2afe54d 414 Gene3D G3DSA:3.30.70.360 222 335 2.0E-109 T 11-10-2018 ATC04_16870 c8cb7798dbfae605cb8ebc88e2afe54d 414 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 21 409 3.5E-83 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ATC04_18260 645e9773596e126b07763c91fab5d817 470 SUPERFAMILY SSF46689 6 109 2.15E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_18260 645e9773596e126b07763c91fab5d817 470 SUPERFAMILY SSF53098 140 322 1.8E-25 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_18260 645e9773596e126b07763c91fab5d817 470 Gene3D G3DSA:3.30.420.10 135 324 1.2E-35 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_18260 645e9773596e126b07763c91fab5d817 470 SUPERFAMILY SSF50610 335 399 6.8E-14 T 11-10-2018 IPR009004 Transposase, Mu, C-terminal ATC04_18260 645e9773596e126b07763c91fab5d817 470 Gene3D G3DSA:2.30.30.130 325 399 8.3E-9 T 11-10-2018 IPR009004 Transposase, Mu, C-terminal ATC04_18260 645e9773596e126b07763c91fab5d817 470 Pfam PF09299 Mu transposase, C-terminal 339 397 1.4E-18 T 11-10-2018 IPR015378 Transposase-like, Mu, C-terminal ATC04_18260 645e9773596e126b07763c91fab5d817 470 Pfam PF00665 Integrase core domain 140 268 2.8E-24 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_17825 645e9773596e126b07763c91fab5d817 470 SUPERFAMILY SSF46689 6 109 2.15E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_17825 645e9773596e126b07763c91fab5d817 470 SUPERFAMILY SSF53098 140 322 1.8E-25 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_17825 645e9773596e126b07763c91fab5d817 470 Gene3D G3DSA:3.30.420.10 135 324 1.2E-35 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_17825 645e9773596e126b07763c91fab5d817 470 SUPERFAMILY SSF50610 335 399 6.8E-14 T 11-10-2018 IPR009004 Transposase, Mu, C-terminal ATC04_17825 645e9773596e126b07763c91fab5d817 470 Gene3D G3DSA:2.30.30.130 325 399 8.3E-9 T 11-10-2018 IPR009004 Transposase, Mu, C-terminal ATC04_17825 645e9773596e126b07763c91fab5d817 470 Pfam PF09299 Mu transposase, C-terminal 339 397 1.4E-18 T 11-10-2018 IPR015378 Transposase-like, Mu, C-terminal ATC04_17825 645e9773596e126b07763c91fab5d817 470 Pfam PF00665 Integrase core domain 140 268 2.8E-24 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_06830 43e62cef5eecae6f9da42395accd2ec0 257 Pfam PF00005 ABC transporter 31 179 1.3E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_06830 43e62cef5eecae6f9da42395accd2ec0 257 SMART SM00382 40 227 1.5E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_06830 43e62cef5eecae6f9da42395accd2ec0 257 SUPERFAMILY SSF52540 16 249 5.19E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06830 43e62cef5eecae6f9da42395accd2ec0 257 PIRSF PIRSF039085 12 255 8.2E-109 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ATC04_06830 43e62cef5eecae6f9da42395accd2ec0 257 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_06830 43e62cef5eecae6f9da42395accd2ec0 257 Gene3D G3DSA:3.40.50.300 14 255 1.3E-78 T 11-10-2018 ATC04_14095 d07f79d6e9143970a91dfaaeff4f11c7 226 SUPERFAMILY SSF51735 1 220 1.3E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_14095 d07f79d6e9143970a91dfaaeff4f11c7 226 Gene3D G3DSA:3.40.50.720 3 223 4.2E-35 T 11-10-2018 ATC04_14095 d07f79d6e9143970a91dfaaeff4f11c7 226 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 35 216 2.1E-21 T 11-10-2018 ATC04_14095 d07f79d6e9143970a91dfaaeff4f11c7 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 204 5.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_14095 d07f79d6e9143970a91dfaaeff4f11c7 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 5.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_14095 d07f79d6e9143970a91dfaaeff4f11c7 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 5.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_14095 d07f79d6e9143970a91dfaaeff4f11c7 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 5.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_14095 d07f79d6e9143970a91dfaaeff4f11c7 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02895 8965b643d044fa099ed33eb213d18d38 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 2.1E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_02895 8965b643d044fa099ed33eb213d18d38 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 2.1E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_02895 8965b643d044fa099ed33eb213d18d38 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 2.1E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_02895 8965b643d044fa099ed33eb213d18d38 229 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_02895 8965b643d044fa099ed33eb213d18d38 229 SUPERFAMILY SSF46894 136 200 2.72E-15 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_02895 8965b643d044fa099ed33eb213d18d38 229 SMART SM00421 152 214 1.5E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_02895 8965b643d044fa099ed33eb213d18d38 229 Pfam PF00072 Response regulator receiver domain 3 112 4.7E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_02895 8965b643d044fa099ed33eb213d18d38 229 SMART SM00448 1 124 3.8E-7 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_02895 8965b643d044fa099ed33eb213d18d38 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 200 6.0E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_02895 8965b643d044fa099ed33eb213d18d38 229 Gene3D G3DSA:3.40.50.2300 1 147 2.1E-18 T 11-10-2018 ATC04_02895 8965b643d044fa099ed33eb213d18d38 229 Gene3D G3DSA:1.10.10.10 148 225 2.8E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_02895 8965b643d044fa099ed33eb213d18d38 229 SUPERFAMILY SSF52172 1 154 7.68E-15 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_15085 4d199037823e18e41241f2b0687aec51 266 SUPERFAMILY SSF63380 3 119 5.11E-11 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ATC04_15085 4d199037823e18e41241f2b0687aec51 266 Gene3D G3DSA:3.40.50.80 117 257 7.6E-45 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_15085 4d199037823e18e41241f2b0687aec51 266 Pfam PF04954 Siderophore-interacting protein 122 238 3.5E-36 T 11-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain ATC04_15085 4d199037823e18e41241f2b0687aec51 266 Pfam PF08021 Siderophore-interacting FAD-binding domain 2 113 3.9E-30 T 11-10-2018 IPR013113 FAD-binding 9, siderophore-interacting ATC04_15085 4d199037823e18e41241f2b0687aec51 266 Gene3D G3DSA:2.40.30.10 1 114 1.5E-28 T 11-10-2018 ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 Gene3D G3DSA:2.60.40.10 799 888 4.9E-25 T 11-10-2018 IPR013783 Immunoglobulin-like fold ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 SUPERFAMILY SSF49899 627 803 6.34E-30 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 Gene3D G3DSA:2.60.120.200 625 796 1.6E-31 T 11-10-2018 ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 SMART SM00560 649 789 1.3E-5 T 11-10-2018 IPR006558 LamG-like jellyroll fold ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 SUPERFAMILY SSF49299 794 889 1.29E-20 T 11-10-2018 IPR035986 PKD domain superfamily ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 Gene3D G3DSA:2.60.40.10 471 566 2.1E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 Gene3D G3DSA:2.60.40.10 889 976 1.4E-24 T 11-10-2018 IPR013783 Immunoglobulin-like fold ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 Gene3D G3DSA:2.60.40.10 977 1066 2.5E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 SUPERFAMILY SSF49299 980 1065 4.84E-18 T 11-10-2018 IPR035986 PKD domain superfamily ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 Pfam PF00801 PKD domain 902 965 2.3E-13 T 11-10-2018 IPR000601 PKD domain ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 Pfam PF00801 PKD domain 827 879 4.3E-15 T 11-10-2018 IPR000601 PKD domain ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 Pfam PF00801 PKD domain 996 1050 6.4E-15 T 11-10-2018 IPR000601 PKD domain ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 SUPERFAMILY SSF49299 890 976 9.81E-21 T 11-10-2018 IPR035986 PKD domain superfamily ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 633 792 3.0E-26 T 11-10-2018 ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 SUPERFAMILY SSF50998 51 436 2.35E-9 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 SMART SM00089 983 1065 7.2E-19 T 11-10-2018 IPR022409 PKD/Chitinase domain ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 SMART SM00089 808 890 1.0E-20 T 11-10-2018 IPR022409 PKD/Chitinase domain ATC04_10870 6db8e73d9c614beffd0399bd5ae92a82 1279 SMART SM00089 894 976 6.4E-17 T 11-10-2018 IPR022409 PKD/Chitinase domain ATC04_13500 319cb99145a612a4b2c151deaaa2c818 335 Pfam PF04657 Putative inner membrane exporter, YdcZ 17 161 2.9E-32 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ ATC04_13500 319cb99145a612a4b2c151deaaa2c818 335 Pfam PF04657 Putative inner membrane exporter, YdcZ 179 314 1.3E-20 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ ATC04_11735 ab01bdd7c261c6088b8a72f1eeae7165 254 SUPERFAMILY SSF52540 4 227 2.88E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11735 ab01bdd7c261c6088b8a72f1eeae7165 254 SMART SM00382 30 214 1.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_11735 ab01bdd7c261c6088b8a72f1eeae7165 254 Gene3D G3DSA:3.40.50.300 2 240 7.2E-58 T 11-10-2018 ATC04_11735 ab01bdd7c261c6088b8a72f1eeae7165 254 Pfam PF00005 ABC transporter 21 164 1.3E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_13315 ccd53c6fc1816477382732a0f278fba6 393 Gene3D G3DSA:3.30.565.10 244 383 3.8E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_13315 ccd53c6fc1816477382732a0f278fba6 393 SUPERFAMILY SSF55874 242 381 1.57E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_13315 ccd53c6fc1816477382732a0f278fba6 393 Pfam PF06580 Histidine kinase 186 264 2.7E-24 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 ATC04_13315 ccd53c6fc1816477382732a0f278fba6 393 SMART SM00387 279 384 2.0E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_13315 ccd53c6fc1816477382732a0f278fba6 393 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 286 381 2.5E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_01605 6f95b7df3fa3e19db574d070937e1bbf 672 SUPERFAMILY SSF52540 342 591 3.3E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_01605 6f95b7df3fa3e19db574d070937e1bbf 672 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 570 631 8.6E-11 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_01605 6f95b7df3fa3e19db574d070937e1bbf 672 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_01605 6f95b7df3fa3e19db574d070937e1bbf 672 Pfam PF00005 ABC transporter 363 520 1.0E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_01605 6f95b7df3fa3e19db574d070937e1bbf 672 SMART SM00382 371 570 7.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_01605 6f95b7df3fa3e19db574d070937e1bbf 672 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 572 628 5.9E-9 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_01605 6f95b7df3fa3e19db574d070937e1bbf 672 Gene3D G3DSA:3.40.50.300 340 658 2.4E-82 T 11-10-2018 ATC04_01605 6f95b7df3fa3e19db574d070937e1bbf 672 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 273 3.1E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_01605 6f95b7df3fa3e19db574d070937e1bbf 672 SUPERFAMILY SSF161098 78 269 4.45E-18 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_01605 6f95b7df3fa3e19db574d070937e1bbf 672 Gene3D G3DSA:1.10.3720.10 73 279 4.3E-14 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_03440 ab4dedd3e0ed6316d67d2886bf9c9fcb 553 Gene3D G3DSA:3.40.190.10 13 286 3.1E-66 T 11-10-2018 ATC04_03440 ab4dedd3e0ed6316d67d2886bf9c9fcb 553 SUPERFAMILY SSF53850 41 546 1.56E-117 T 11-10-2018 ATC04_03440 ab4dedd3e0ed6316d67d2886bf9c9fcb 553 Gene3D G3DSA:3.10.105.10 294 522 1.1E-50 T 11-10-2018 ATC04_03440 ab4dedd3e0ed6316d67d2886bf9c9fcb 553 PIRSF PIRSF002741 6 551 8.7E-98 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ATC04_03440 ab4dedd3e0ed6316d67d2886bf9c9fcb 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 451 2.3E-76 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ATC04_10365 914e263ae5f5ba505a35c58fcde931b6 215 Pfam PF10502 Signal peptidase, peptidase S26 114 204 3.1E-5 T 11-10-2018 IPR019533 Peptidase S26 ATC04_10365 914e263ae5f5ba505a35c58fcde931b6 215 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 114 126 6.2E-18 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ATC04_10365 914e263ae5f5ba505a35c58fcde931b6 215 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 41 57 6.2E-18 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ATC04_10365 914e263ae5f5ba505a35c58fcde931b6 215 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 162 181 6.2E-18 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ATC04_10365 914e263ae5f5ba505a35c58fcde931b6 215 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 26 209 5.9E-37 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ATC04_10365 914e263ae5f5ba505a35c58fcde931b6 215 ProSitePatterns PS00761 Signal peptidases I signature 3. 167 180 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 ATC04_10365 914e263ae5f5ba505a35c58fcde931b6 215 ProSitePatterns PS00501 Signal peptidases I serine active site. 50 57 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 ATC04_10365 914e263ae5f5ba505a35c58fcde931b6 215 Gene3D G3DSA:2.10.109.10 49 208 5.9E-27 T 11-10-2018 ATC04_10365 914e263ae5f5ba505a35c58fcde931b6 215 Pfam PF00717 Peptidase S24-like 48 86 1.4E-6 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ATC04_10365 914e263ae5f5ba505a35c58fcde931b6 215 SUPERFAMILY SSF51306 39 211 6.28E-39 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ATC04_03835 83c3720739cbd7f177537a0463861e55 253 SMART SM00382 30 227 8.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_03835 83c3720739cbd7f177537a0463861e55 253 SUPERFAMILY SSF52540 5 240 8.84E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03835 83c3720739cbd7f177537a0463861e55 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_03835 83c3720739cbd7f177537a0463861e55 253 Gene3D G3DSA:3.40.50.300 1 248 3.6E-66 T 11-10-2018 ATC04_03835 83c3720739cbd7f177537a0463861e55 253 Pfam PF00005 ABC transporter 21 177 1.3E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_12285 662ce50f428d0d2ce7188536d3efb568 377 Gene3D G3DSA:3.30.70.1560 263 353 4.8E-53 T 11-10-2018 ATC04_12285 662ce50f428d0d2ce7188536d3efb568 377 Gene3D G3DSA:3.30.70.580 202 361 4.8E-53 T 11-10-2018 ATC04_12285 662ce50f428d0d2ce7188536d3efb568 377 SMART SM00363 138 203 4.9E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_12285 662ce50f428d0d2ce7188536d3efb568 377 SUPERFAMILY SSF55120 196 375 5.76E-43 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_12285 662ce50f428d0d2ce7188536d3efb568 377 Gene3D G3DSA:3.10.290.10 134 195 3.3E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ATC04_12285 662ce50f428d0d2ce7188536d3efb568 377 Pfam PF00849 RNA pseudouridylate synthase 200 333 2.0E-21 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_12285 662ce50f428d0d2ce7188536d3efb568 377 Pfam PF01479 S4 domain 138 179 1.2E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_12285 662ce50f428d0d2ce7188536d3efb568 377 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 204 363 3.5E-46 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ATC04_12285 662ce50f428d0d2ce7188536d3efb568 377 SUPERFAMILY SSF55174 117 241 7.59E-19 T 11-10-2018 ATC04_12285 662ce50f428d0d2ce7188536d3efb568 377 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 239 253 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ATC04_00795 bab944ac0ac78e128e6d66d781e83c98 426 Gene3D G3DSA:3.40.630.10 12 422 1.9E-144 T 11-10-2018 ATC04_00795 bab944ac0ac78e128e6d66d781e83c98 426 SUPERFAMILY SSF101821 90 205 1.83E-28 T 11-10-2018 ATC04_00795 bab944ac0ac78e128e6d66d781e83c98 426 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 16 424 1.3E-119 T 11-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 ATC04_00795 bab944ac0ac78e128e6d66d781e83c98 426 SUPERFAMILY SSF53187 7 424 7.99E-93 T 11-10-2018 ATC04_00795 bab944ac0ac78e128e6d66d781e83c98 426 Gene3D G3DSA:2.30.250.10 88 211 1.9E-144 T 11-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 ATC04_00795 bab944ac0ac78e128e6d66d781e83c98 426 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 391 406 8.1E-36 T 11-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 ATC04_00795 bab944ac0ac78e128e6d66d781e83c98 426 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 302 318 8.1E-36 T 11-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 ATC04_00795 bab944ac0ac78e128e6d66d781e83c98 426 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 259 277 8.1E-36 T 11-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 ATC04_00795 bab944ac0ac78e128e6d66d781e83c98 426 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 111 131 8.1E-36 T 11-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 ATC04_00795 bab944ac0ac78e128e6d66d781e83c98 426 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 78 94 8.1E-36 T 11-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 ATC04_11380 e0e4cf23d8a273367f6af3a29d4045d6 291 Pfam PF00700 Bacterial flagellin C-terminal helical region 208 290 2.0E-6 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ATC04_11380 e0e4cf23d8a273367f6af3a29d4045d6 291 SUPERFAMILY SSF64518 1 291 4.45E-52 T 11-10-2018 ATC04_11380 e0e4cf23d8a273367f6af3a29d4045d6 291 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 3 183 3.2E-42 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 ATC04_11380 e0e4cf23d8a273367f6af3a29d4045d6 291 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 5.3E-19 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ATC04_11380 e0e4cf23d8a273367f6af3a29d4045d6 291 Gene3D G3DSA:1.20.1330.10 41 236 1.3E-44 T 11-10-2018 ATC04_05975 ccd8a4153abad9158d9ff32b5b2f655b 351 PIRSF PIRSF006487 179 330 1.6E-5 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 ATC04_05975 ccd8a4153abad9158d9ff32b5b2f655b 351 PIRSF PIRSF006487 6 139 2.5E-7 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 ATC04_05975 ccd8a4153abad9158d9ff32b5b2f655b 351 Pfam PF01571 Aminomethyltransferase folate-binding domain 16 135 1.4E-14 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain ATC04_05975 ccd8a4153abad9158d9ff32b5b2f655b 351 Gene3D G3DSA:3.30.1360.120 10 332 1.3E-51 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ATC04_05975 ccd8a4153abad9158d9ff32b5b2f655b 351 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 236 318 1.9E-7 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ATC04_05975 ccd8a4153abad9158d9ff32b5b2f655b 351 SUPERFAMILY SSF103025 17 251 5.81E-46 T 11-10-2018 ATC04_05975 ccd8a4153abad9158d9ff32b5b2f655b 351 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 200 261 8.8E-19 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site ATC04_05975 ccd8a4153abad9158d9ff32b5b2f655b 351 SUPERFAMILY SSF101790 255 325 1.41E-6 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal ATC04_00535 742b0875886257bb7009bb6e86397416 487 Gene3D G3DSA:3.40.710.10 138 480 1.6E-122 T 11-10-2018 ATC04_00535 742b0875886257bb7009bb6e86397416 487 SUPERFAMILY SSF56601 97 486 2.73E-77 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ATC04_00535 742b0875886257bb7009bb6e86397416 487 Pfam PF00905 Penicillin binding protein transpeptidase domain 158 481 2.3E-64 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ATC04_00535 742b0875886257bb7009bb6e86397416 487 Gene3D G3DSA:3.90.1310.10 57 382 1.6E-122 T 11-10-2018 ATC04_08545 ecf8535a082b202ac367f9732896562d 484 PIRSF PIRSF000362 9 478 1.1E-158 T 11-10-2018 IPR021163 Ferredoxin-NADP+ reductase, adrenodoxin-type GO:0016491|GO:0055114 Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 ATC04_08545 ecf8535a082b202ac367f9732896562d 484 Gene3D G3DSA:3.50.50.60 59 338 2.7E-138 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_08545 ecf8535a082b202ac367f9732896562d 484 PRINTS PR00419 Adrenodoxin reductase family signature 16 38 2.5E-17 T 11-10-2018 ATC04_08545 ecf8535a082b202ac367f9732896562d 484 PRINTS PR00419 Adrenodoxin reductase family signature 161 175 2.5E-17 T 11-10-2018 ATC04_08545 ecf8535a082b202ac367f9732896562d 484 PRINTS PR00419 Adrenodoxin reductase family signature 90 100 2.5E-17 T 11-10-2018 ATC04_08545 ecf8535a082b202ac367f9732896562d 484 Gene3D G3DSA:3.40.50.720 17 457 2.7E-138 T 11-10-2018 ATC04_08545 ecf8535a082b202ac367f9732896562d 484 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 16 183 3.9E-12 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_08545 ecf8535a082b202ac367f9732896562d 484 SUPERFAMILY SSF51971 15 338 6.0E-57 T 11-10-2018 ATC04_01795 b6f550cdfb1a9b52f59bc91fe4360a86 311 SUPERFAMILY SSF55073 170 306 5.49E-39 T 11-10-2018 IPR029787 Nucleotide cyclase ATC04_01795 b6f550cdfb1a9b52f59bc91fe4360a86 311 Gene3D G3DSA:3.30.70.270 157 310 5.4E-43 T 11-10-2018 ATC04_01795 b6f550cdfb1a9b52f59bc91fe4360a86 311 Pfam PF00990 Diguanylate cyclase, GGDEF domain 166 307 3.1E-34 T 11-10-2018 IPR000160 GGDEF domain ATC04_01795 b6f550cdfb1a9b52f59bc91fe4360a86 311 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 307 3.4E-36 T 11-10-2018 IPR000160 GGDEF domain ATC04_01795 b6f550cdfb1a9b52f59bc91fe4360a86 311 SMART SM00267 154 310 1.6E-39 T 11-10-2018 IPR000160 GGDEF domain ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 Gene3D G3DSA:3.40.50.1370 134 294 7.2E-89 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 146 2.5E-44 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 Gene3D G3DSA:3.40.50.1370 5 309 7.2E-89 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 272 277 2.8E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 133 150 2.8E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 228 237 2.8E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 296 310 2.8E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 76 85 2.8E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 38 60 2.8E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 317 40.615 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 SUPERFAMILY SSF53671 1 316 9.3E-87 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 2.5E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 2.5E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 280 303 2.5E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 2.5E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 163 313 1.8E-17 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ATC04_09260 6ccb68a9da75bab8f496eb503c310902 320 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 315 6.3E-88 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ATC04_09030 b9fb0fae633b9b61ba7174a60b2f5e1b 210 Gene3D G3DSA:1.10.357.10 1 201 1.7E-54 T 11-10-2018 ATC04_09030 b9fb0fae633b9b61ba7174a60b2f5e1b 210 SUPERFAMILY SSF46689 2 60 2.1E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_09030 b9fb0fae633b9b61ba7174a60b2f5e1b 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 44 8.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_09030 b9fb0fae633b9b61ba7174a60b2f5e1b 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 1 14 8.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_09030 b9fb0fae633b9b61ba7174a60b2f5e1b 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 45 2.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_09030 b9fb0fae633b9b61ba7174a60b2f5e1b 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 13 42 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ATC04_13670 2b16c5f1df31c3fa487c1ffa1d7ae078 321 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 31 7.3E-9 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATC04_13670 2b16c5f1df31c3fa487c1ffa1d7ae078 321 Gene3D G3DSA:3.40.50.2300 62 297 1.2E-42 T 11-10-2018 ATC04_13670 2b16c5f1df31c3fa487c1ffa1d7ae078 321 Pfam PF13377 Periplasmic binding protein-like domain 152 316 1.5E-21 T 11-10-2018 ATC04_13670 2b16c5f1df31c3fa487c1ffa1d7ae078 321 Gene3D G3DSA:3.40.50.2300 144 276 1.2E-42 T 11-10-2018 ATC04_13670 2b16c5f1df31c3fa487c1ffa1d7ae078 321 SUPERFAMILY SSF53822 62 319 8.64E-32 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ATC04_13670 2b16c5f1df31c3fa487c1ffa1d7ae078 321 SMART SM00354 1 54 4.6E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATC04_13670 2b16c5f1df31c3fa487c1ffa1d7ae078 321 Gene3D G3DSA:1.10.260.40 1 41 1.1E-11 T 11-10-2018 ATC04_13670 2b16c5f1df31c3fa487c1ffa1d7ae078 321 SUPERFAMILY SSF47413 1 41 7.41E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_01220 a59efd85787807b9f722a2d3863d2a79 394 Gene3D G3DSA:1.20.140.10 210 390 8.3E-39 T 11-10-2018 ATC04_01220 a59efd85787807b9f722a2d3863d2a79 394 Gene3D G3DSA:2.40.110.10 109 207 8.8E-34 T 11-10-2018 ATC04_01220 a59efd85787807b9f722a2d3863d2a79 394 SUPERFAMILY SSF47203 233 365 2.09E-15 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_01220 a59efd85787807b9f722a2d3863d2a79 394 SUPERFAMILY SSF56645 14 207 3.27E-30 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_01220 a59efd85787807b9f722a2d3863d2a79 394 PIRSF PIRSF016578 2 391 8.8E-121 T 11-10-2018 ATC04_01220 a59efd85787807b9f722a2d3863d2a79 394 Gene3D G3DSA:1.10.540.10 2 108 6.6E-25 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_01220 a59efd85787807b9f722a2d3863d2a79 394 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 239 369 7.3E-35 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ATC04_06985 535b1eaede43ee3bafcf4f87a992cca5 129 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 13 77 3.3E-15 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ATC04_06985 535b1eaede43ee3bafcf4f87a992cca5 129 Gene3D G3DSA:1.10.10.10 11 109 5.0E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_06985 535b1eaede43ee3bafcf4f87a992cca5 129 SUPERFAMILY SSF46767 14 74 1.1E-12 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 ATC04_10455 7e83338638323e69a58f60c340d63835 570 Gene3D G3DSA:3.30.300.310 444 549 2.9E-21 T 11-10-2018 ATC04_10455 7e83338638323e69a58f60c340d63835 570 Pfam PF00501 AMP-binding enzyme 52 448 1.3E-71 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_10455 7e83338638323e69a58f60c340d63835 570 Pfam PF13193 AMP-binding enzyme C-terminal domain 457 534 7.4E-18 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ATC04_10455 7e83338638323e69a58f60c340d63835 570 Gene3D G3DSA:3.40.50.12780 13 442 2.5E-110 T 11-10-2018 ATC04_10455 7e83338638323e69a58f60c340d63835 570 SUPERFAMILY SSF56801 23 546 1.14E-124 T 11-10-2018 ATC04_10455 7e83338638323e69a58f60c340d63835 570 ProSitePatterns PS00455 Putative AMP-binding domain signature. 202 213 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_05275 2e52fd21b58b0063f02e34cda759b2f5 216 Pfam PF02629 CoA binding domain 89 186 6.5E-17 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ATC04_05275 2e52fd21b58b0063f02e34cda759b2f5 216 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 9 216 29.69 T 11-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 ATC04_05275 2e52fd21b58b0063f02e34cda759b2f5 216 Gene3D G3DSA:3.40.50.720 85 215 7.0E-37 T 11-10-2018 ATC04_05275 2e52fd21b58b0063f02e34cda759b2f5 216 SMART SM00881 87 188 9.1E-16 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ATC04_05275 2e52fd21b58b0063f02e34cda759b2f5 216 SUPERFAMILY SSF46785 15 87 4.9E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_05275 2e52fd21b58b0063f02e34cda759b2f5 216 Gene3D G3DSA:1.10.10.10 13 84 6.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_05275 2e52fd21b58b0063f02e34cda759b2f5 216 Pfam PF06971 Putative DNA-binding protein N-terminus 14 61 4.7E-16 T 11-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 ATC04_05275 2e52fd21b58b0063f02e34cda759b2f5 216 SUPERFAMILY SSF51735 89 211 4.43E-24 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_10735 9099db9acb20f77e9a062730149530e0 254 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 57 251 1.2E-68 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ATC04_10735 9099db9acb20f77e9a062730149530e0 254 Pfam PF10370 Domain of unknown function (DUF2437) 1 51 2.0E-18 T 11-10-2018 IPR018833 Domain of unknown function DUF2437 ATC04_10735 9099db9acb20f77e9a062730149530e0 254 Gene3D G3DSA:3.90.850.10 33 253 8.5E-83 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_10735 9099db9acb20f77e9a062730149530e0 254 SUPERFAMILY SSF56529 46 252 6.28E-78 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_02660 072656951dbefc8e0af8d7bf7f01e395 513 Pfam PF00005 ABC transporter 21 178 7.9E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_02660 072656951dbefc8e0af8d7bf7f01e395 513 SUPERFAMILY SSF52540 5 244 7.71E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_02660 072656951dbefc8e0af8d7bf7f01e395 513 SMART SM00382 29 227 4.1E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_02660 072656951dbefc8e0af8d7bf7f01e395 513 SMART SM00382 297 476 3.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_02660 072656951dbefc8e0af8d7bf7f01e395 513 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_02660 072656951dbefc8e0af8d7bf7f01e395 513 Gene3D G3DSA:3.40.50.300 3 265 9.9E-69 T 11-10-2018 ATC04_02660 072656951dbefc8e0af8d7bf7f01e395 513 Gene3D G3DSA:3.40.50.300 266 511 1.0E-63 T 11-10-2018 ATC04_02660 072656951dbefc8e0af8d7bf7f01e395 513 SUPERFAMILY SSF52540 276 501 5.71E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_02660 072656951dbefc8e0af8d7bf7f01e395 513 Pfam PF00005 ABC transporter 289 427 2.1E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_02660 072656951dbefc8e0af8d7bf7f01e395 513 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_16310 78a1b8ca09ac5461868cd83072e94987 113 SUPERFAMILY SSF54593 2 111 1.17E-10 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_16310 78a1b8ca09ac5461868cd83072e94987 113 Gene3D G3DSA:3.10.180.10 1 113 1.3E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_16120 6dd28b871603aea1c1405065d7392429 303 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_16120 6dd28b871603aea1c1405065d7392429 303 Gene3D G3DSA:3.40.50.300 1 235 6.1E-56 T 11-10-2018 ATC04_16120 6dd28b871603aea1c1405065d7392429 303 SMART SM00382 27 205 1.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_16120 6dd28b871603aea1c1405065d7392429 303 Pfam PF00005 ABC transporter 18 157 3.6E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_16120 6dd28b871603aea1c1405065d7392429 303 SUPERFAMILY SSF52540 2 217 1.67E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 Gene3D G3DSA:2.40.50.100 1072 1148 3.5E-18 T 11-10-2018 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 326 4.4E-68 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1104 1121 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 Pfam PF02785 Biotin carboxylase C-terminal domain 343 450 5.6E-34 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 Gene3D G3DSA:3.30.470.130 1 458 1.1E-182 T 11-10-2018 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 SUPERFAMILY SSF51230 1072 1148 8.11E-17 T 11-10-2018 IPR011053 Single hybrid motif ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 SUPERFAMILY SSF52440 1 112 7.19E-41 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 SUPERFAMILY SSF89000 846 1013 5.49E-38 T 11-10-2018 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 SUPERFAMILY SSF51569 540 849 1.01E-77 T 11-10-2018 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 Pfam PF02436 Conserved carboxylase domain 841 1031 6.9E-50 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 Pfam PF00364 Biotin-requiring enzyme 1090 1147 3.4E-14 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 Gene3D G3DSA:3.10.600.10 462 1062 1.8E-231 T 11-10-2018 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 4 1148 0.0 T 11-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 SUPERFAMILY SSF56059 84 364 1.2E-65 T 11-10-2018 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 SUPERFAMILY SSF51246 338 456 3.71E-38 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 Pfam PF00682 HMGL-like 545 816 6.5E-28 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 PIRSF PIRSF001594 1 1149 0.0 T 11-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.5E-40 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 Gene3D G3DSA:3.20.20.70 480 1012 1.8E-231 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_12210 4cee84c9bd73e5f1894f8053d523d967 1150 SMART SM00878 343 450 3.4E-53 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 Gene3D G3DSA:3.40.50.1260 15 407 1.3E-138 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 409 40.091 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 Gene3D G3DSA:3.40.50.1260 180 399 1.3E-138 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 PRINTS PR00477 Phosphoglycerate kinase family signature 361 372 1.2E-76 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 PRINTS PR00477 Phosphoglycerate kinase family signature 35 57 1.2E-76 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 PRINTS PR00477 Phosphoglycerate kinase family signature 178 200 1.2E-76 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 PRINTS PR00477 Phosphoglycerate kinase family signature 148 170 1.2E-76 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 PRINTS PR00477 Phosphoglycerate kinase family signature 385 402 1.2E-76 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 PRINTS PR00477 Phosphoglycerate kinase family signature 201 220 1.2E-76 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 PRINTS PR00477 Phosphoglycerate kinase family signature 14 30 1.2E-76 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 PRINTS PR00477 Phosphoglycerate kinase family signature 328 353 1.2E-76 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 PRINTS PR00477 Phosphoglycerate kinase family signature 113 128 1.2E-76 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 Pfam PF00162 Phosphoglycerate kinase 12 399 2.9E-140 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 SUPERFAMILY SSF53748 10 408 1.88E-137 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08210 96c71aef2f238cce16bceafaab519cd6 409 PIRSF PIRSF000724 3 409 2.6E-128 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_02735 dc28ba267fee5a44acb5e3029f344134 158 TIGRFAM TIGR01935 NOT-MenG: RraA family 8 156 1.5E-58 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 ATC04_02735 dc28ba267fee5a44acb5e3029f344134 158 SUPERFAMILY SSF89562 6 156 1.44E-44 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily ATC04_02735 dc28ba267fee5a44acb5e3029f344134 158 Gene3D G3DSA:3.50.30.40 3 158 1.5E-56 T 11-10-2018 ATC04_02735 dc28ba267fee5a44acb5e3029f344134 158 Pfam PF03737 Aldolase/RraA 8 156 4.1E-40 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ATC04_16415 f4cbf4a5f7262057bdbf3683bda759a3 250 SUPERFAMILY SSF46894 138 244 8.5E-23 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_16415 f4cbf4a5f7262057bdbf3683bda759a3 250 SMART SM00448 6 116 4.3E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_16415 f4cbf4a5f7262057bdbf3683bda759a3 250 SMART SM00862 159 243 2.9E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_16415 f4cbf4a5f7262057bdbf3683bda759a3 250 SUPERFAMILY SSF52172 8 183 7.68E-23 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_16415 f4cbf4a5f7262057bdbf3683bda759a3 250 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 243 1.4E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_16415 f4cbf4a5f7262057bdbf3683bda759a3 250 Pfam PF00072 Response regulator receiver domain 9 116 1.9E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_16415 f4cbf4a5f7262057bdbf3683bda759a3 250 Gene3D G3DSA:1.10.10.10 138 248 4.6E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16415 f4cbf4a5f7262057bdbf3683bda759a3 250 Gene3D G3DSA:3.40.50.2300 4 137 5.5E-20 T 11-10-2018 ATC04_12765 77916dc9a2e83bc3955d414144b80b5c 456 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 67 90 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 ATC04_12765 77916dc9a2e83bc3955d414144b80b5c 456 Pfam PF00675 Insulinase (Peptidase family M16) 46 190 1.6E-33 T 11-10-2018 IPR011765 Peptidase M16, N-terminal ATC04_12765 77916dc9a2e83bc3955d414144b80b5c 456 Gene3D G3DSA:3.30.830.10 270 452 8.2E-54 T 11-10-2018 ATC04_12765 77916dc9a2e83bc3955d414144b80b5c 456 SUPERFAMILY SSF63411 267 453 7.33E-48 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ATC04_12765 77916dc9a2e83bc3955d414144b80b5c 456 Pfam PF05193 Peptidase M16 inactive domain 200 382 1.1E-35 T 11-10-2018 IPR007863 Peptidase M16, C-terminal ATC04_12765 77916dc9a2e83bc3955d414144b80b5c 456 Gene3D G3DSA:3.30.830.10 36 243 1.3E-62 T 11-10-2018 ATC04_12765 77916dc9a2e83bc3955d414144b80b5c 456 SUPERFAMILY SSF63411 35 239 4.03E-55 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ATC04_12640 8158561bdd6d61505c0a87d1f64cd1de 309 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 12 308 26.39 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ATC04_12640 8158561bdd6d61505c0a87d1f64cd1de 309 Gene3D G3DSA:3.10.310.10 155 289 1.0E-32 T 11-10-2018 ATC04_12640 8158561bdd6d61505c0a87d1f64cd1de 309 SUPERFAMILY SSF54506 14 138 4.54E-30 T 11-10-2018 ATC04_12640 8158561bdd6d61505c0a87d1f64cd1de 309 Gene3D G3DSA:3.10.310.10 11 154 2.5E-42 T 11-10-2018 ATC04_12640 8158561bdd6d61505c0a87d1f64cd1de 309 SUPERFAMILY SSF54506 169 306 1.05E-26 T 11-10-2018 ATC04_12640 8158561bdd6d61505c0a87d1f64cd1de 309 Pfam PF01678 Diaminopimelate epimerase 14 137 6.3E-27 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ATC04_12640 8158561bdd6d61505c0a87d1f64cd1de 309 Pfam PF01678 Diaminopimelate epimerase 176 300 3.5E-18 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ATC04_12640 8158561bdd6d61505c0a87d1f64cd1de 309 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 13 306 4.0E-52 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ATC04_12640 8158561bdd6d61505c0a87d1f64cd1de 309 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 86 100 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ATC04_07195 155205e22830b08eb0cd32d485c5b9b5 127 Pfam PF01817 Chorismate mutase type II 36 111 6.3E-19 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATC04_07195 155205e22830b08eb0cd32d485c5b9b5 127 SMART SM00830 36 116 2.3E-23 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATC04_07195 155205e22830b08eb0cd32d485c5b9b5 127 SUPERFAMILY SSF48600 26 115 1.98E-25 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATC04_07195 155205e22830b08eb0cd32d485c5b9b5 127 Gene3D G3DSA:1.20.59.10 21 126 3.7E-41 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATC04_07195 155205e22830b08eb0cd32d485c5b9b5 127 TIGRFAM TIGR01795 CM_mono_cladeE: chorismate mutase 29 120 1.5E-41 T 11-10-2018 IPR010951 Chorismate mutase, bacteria ATC04_05935 a3a59e15ef7c7d41d61f4095282abb79 267 Pfam PF00303 Thymidylate synthase 6 267 1.1E-124 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ATC04_05935 a3a59e15ef7c7d41d61f4095282abb79 267 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 6 87 2.3E-37 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ATC04_05935 a3a59e15ef7c7d41d61f4095282abb79 267 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 88 267 3.5E-88 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ATC04_05935 a3a59e15ef7c7d41d61f4095282abb79 267 PRINTS PR00108 Thymidylate synthase family signature 118 137 1.0E-48 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ATC04_05935 a3a59e15ef7c7d41d61f4095282abb79 267 PRINTS PR00108 Thymidylate synthase family signature 45 66 1.0E-48 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ATC04_05935 a3a59e15ef7c7d41d61f4095282abb79 267 PRINTS PR00108 Thymidylate synthase family signature 144 159 1.0E-48 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ATC04_05935 a3a59e15ef7c7d41d61f4095282abb79 267 PRINTS PR00108 Thymidylate synthase family signature 162 188 1.0E-48 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ATC04_05935 a3a59e15ef7c7d41d61f4095282abb79 267 PRINTS PR00108 Thymidylate synthase family signature 200 217 1.0E-48 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ATC04_05935 a3a59e15ef7c7d41d61f4095282abb79 267 ProSitePatterns PS00091 Thymidylate synthase active site. 129 157 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ATC04_05935 a3a59e15ef7c7d41d61f4095282abb79 267 Gene3D G3DSA:3.30.572.10 5 267 1.3E-129 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ATC04_05935 a3a59e15ef7c7d41d61f4095282abb79 267 SUPERFAMILY SSF55831 6 267 2.75E-126 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ATC04_05935 a3a59e15ef7c7d41d61f4095282abb79 267 Hamap MF_00008 Thymidylate synthase [thyA]. 4 267 39.988 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 177 753 6.1E-186 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 ProSitePatterns PS01047 Heavy-metal-associated domain. 20 48 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 452 458 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 159 754 1.2E-163 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 SUPERFAMILY SSF81660 467 584 3.6E-24 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 Pfam PF00122 E1-E2 ATPase 253 428 3.2E-54 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 Gene3D G3DSA:3.40.50.1000 431 703 2.7E-87 T 11-10-2018 IPR023214 HAD superfamily ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 223 734 4.7E-91 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 Pfam PF00702 haloacid dehalogenase-like hydrolase 447 665 8.0E-44 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 Gene3D G3DSA:3.30.70.100 14 79 4.6E-19 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 Pfam PF00403 Heavy-metal-associated domain 19 75 5.5E-12 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 674 686 3.6E-25 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 596 606 3.6E-25 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 651 670 3.6E-25 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 450 464 3.6E-25 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 300 314 3.6E-25 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 SUPERFAMILY SSF55008 12 78 1.31E-15 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 SUPERFAMILY SSF56784 448 751 1.15E-56 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 Gene3D G3DSA:2.70.150.20 243 355 4.6E-37 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 PRINTS PR00943 Copper-transporting ATPase signature 240 258 3.3E-10 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 PRINTS PR00943 Copper-transporting ATPase signature 220 239 3.3E-10 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 PRINTS PR00943 Copper-transporting ATPase signature 628 645 3.3E-10 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 PRINTS PR00943 Copper-transporting ATPase signature 685 699 3.3E-10 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 PRINTS PR00943 Copper-transporting ATPase signature 373 387 3.3E-10 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 PRINTS PR00943 Copper-transporting ATPase signature 30 44 3.3E-10 T 11-10-2018 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 Gene3D G3DSA:3.40.1110.10 461 581 2.7E-87 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 SUPERFAMILY SSF81665 218 442 1.44E-13 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ATC04_02795 3f0a0ed1c22902d16b55f961545bc0ea 759 SUPERFAMILY SSF81653 255 350 3.53E-25 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ATC04_16265 96f2e8fc611140299e279fe0c898b3cb 138 Pfam PF00717 Peptidase S24-like 54 102 2.1E-6 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ATC04_16265 96f2e8fc611140299e279fe0c898b3cb 138 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 51 61 2.1E-5 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ATC04_16265 96f2e8fc611140299e279fe0c898b3cb 138 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 90 102 2.1E-5 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ATC04_16265 96f2e8fc611140299e279fe0c898b3cb 138 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 62 73 2.1E-5 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ATC04_16265 96f2e8fc611140299e279fe0c898b3cb 138 SUPERFAMILY SSF51306 16 135 5.76E-23 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ATC04_16265 96f2e8fc611140299e279fe0c898b3cb 138 Gene3D G3DSA:2.10.109.10 24 137 6.8E-29 T 11-10-2018 ATC04_10995 38abf1588f09d06173fd24b20202bf9b 890 Pfam PF00196 Bacterial regulatory proteins, luxR family 829 881 5.9E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10995 38abf1588f09d06173fd24b20202bf9b 890 SMART SM00421 826 883 9.7E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10995 38abf1588f09d06173fd24b20202bf9b 890 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 859 871 5.8E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10995 38abf1588f09d06173fd24b20202bf9b 890 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 829 843 5.8E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10995 38abf1588f09d06173fd24b20202bf9b 890 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 843 859 5.8E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10995 38abf1588f09d06173fd24b20202bf9b 890 SUPERFAMILY SSF52540 18 208 2.42E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10995 38abf1588f09d06173fd24b20202bf9b 890 Gene3D G3DSA:1.25.40.10 330 651 1.5E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_10995 38abf1588f09d06173fd24b20202bf9b 890 SUPERFAMILY SSF46894 821 887 2.38E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_10995 38abf1588f09d06173fd24b20202bf9b 890 ProSitePatterns PS00622 LuxR-type HTH domain signature. 843 870 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10995 38abf1588f09d06173fd24b20202bf9b 890 Gene3D G3DSA:1.10.10.10 766 889 2.7E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_06685 2f737db3e42f0af510af7029302c4ec4 436 Gene3D G3DSA:2.60.120.600 267 436 5.5E-42 T 11-10-2018 IPR037049 Domain of unknown function DUF1214, C-terminal domain superfamily ATC04_06685 2f737db3e42f0af510af7029302c4ec4 436 Pfam PF06742 Protein of unknown function (DUF1214) 309 417 3.0E-35 T 11-10-2018 IPR010621 Domain of unknown function DUF1214 ATC04_06685 2f737db3e42f0af510af7029302c4ec4 436 Gene3D G3DSA:2.60.40.1610 46 185 1.3E-14 T 11-10-2018 IPR037050 Domain of unknown function DUF1254 superfamily ATC04_06685 2f737db3e42f0af510af7029302c4ec4 436 SUPERFAMILY SSF160935 11 433 8.89E-107 T 11-10-2018 ATC04_06685 2f737db3e42f0af510af7029302c4ec4 436 Pfam PF06863 Protein of unknown function (DUF1254) 42 169 2.4E-45 T 11-10-2018 IPR010679 Domain of unknown function DUF1254 ATC04_06330 15dfd57ce77cf14d9800b6c562594817 132 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 9.8E-8 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 ATC04_06330 15dfd57ce77cf14d9800b6c562594817 132 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 76 84 9.8E-8 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 ATC04_06330 15dfd57ce77cf14d9800b6c562594817 132 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 86 95 9.8E-8 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 ATC04_06330 15dfd57ce77cf14d9800b6c562594817 132 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 129 2.6E-31 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 ATC04_06330 15dfd57ce77cf14d9800b6c562594817 132 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 11-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site ATC04_06330 15dfd57ce77cf14d9800b6c562594817 132 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 129 7.8E-38 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L ATC04_06330 15dfd57ce77cf14d9800b6c562594817 132 Gene3D G3DSA:1.10.1200.120 1 131 2.3E-37 T 11-10-2018 IPR036019 Gated mechanosensitive channel ATC04_06330 15dfd57ce77cf14d9800b6c562594817 132 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 130 21.973 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 ATC04_06330 15dfd57ce77cf14d9800b6c562594817 132 SUPERFAMILY SSF81330 10 118 1.44E-28 T 11-10-2018 IPR036019 Gated mechanosensitive channel ATC04_16215 9d2a74618644813e03627d63a9e28c58 231 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_16215 9d2a74618644813e03627d63a9e28c58 231 Gene3D G3DSA:3.40.50.300 2 231 1.1E-47 T 11-10-2018 ATC04_16215 9d2a74618644813e03627d63a9e28c58 231 Pfam PF00005 ABC transporter 29 166 5.6E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_16215 9d2a74618644813e03627d63a9e28c58 231 SUPERFAMILY SSF52540 7 215 5.22E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16215 9d2a74618644813e03627d63a9e28c58 231 SMART SM00382 35 216 8.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 36 714 2.9E-289 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 SUPERFAMILY SSF81665 55 697 1.63E-12 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 511 1.4E-24 T 11-10-2018 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 336 350 1.4E-24 T 11-10-2018 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 577 589 1.4E-24 T 11-10-2018 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 554 573 1.4E-24 T 11-10-2018 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 185 199 1.4E-24 T 11-10-2018 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 30 718 38.148 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 SUPERFAMILY SSF81653 151 238 4.84E-18 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 Pfam PF00122 E1-E2 ATPase 149 314 3.1E-31 T 11-10-2018 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 SUPERFAMILY SSF56784 324 597 1.13E-37 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 Gene3D G3DSA:3.40.50.1000 318 605 6.1E-60 T 11-10-2018 IPR023214 HAD superfamily ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 455 643 1.1E-40 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 147 355 2.3E-27 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 Pfam PF00702 haloacid dehalogenase-like hydrolase 333 568 3.3E-30 T 11-10-2018 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 338 344 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 Gene3D G3DSA:3.40.1110.10 347 486 6.1E-60 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ATC04_18050 1d1a7d61a5861ab0f4e7989e5ca73b66 720 Gene3D G3DSA:2.70.150.20 144 243 2.7E-23 T 11-10-2018 ATC04_07550 ddf2f8644d8221b0cfa43897af3c22b7 874 Gene3D G3DSA:1.10.268.10 378 466 7.8E-189 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ATC04_07550 ddf2f8644d8221b0cfa43897af3c22b7 874 Gene3D G3DSA:3.90.199.10 41 494 7.8E-189 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 ATC04_07550 ddf2f8644d8221b0cfa43897af3c22b7 874 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 655 669 7.2 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATC04_07550 ddf2f8644d8221b0cfa43897af3c22b7 874 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 747 773 0.066 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATC04_07550 ddf2f8644d8221b0cfa43897af3c22b7 874 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 674 720 1.2E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATC04_07550 ddf2f8644d8221b0cfa43897af3c22b7 874 SUPERFAMILY SSF101904 525 783 4.58E-43 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ATC04_07550 ddf2f8644d8221b0cfa43897af3c22b7 874 SUPERFAMILY SSF56719 40 495 5.23E-159 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ATC04_07550 ddf2f8644d8221b0cfa43897af3c22b7 874 SMART SM00434 20 473 6.2E-244 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATC04_07550 ddf2f8644d8221b0cfa43897af3c22b7 874 Gene3D G3DSA:2.120.10.90 528 784 1.0E-44 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ATC04_07550 ddf2f8644d8221b0cfa43897af3c22b7 874 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 41 474 3.3E-143 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATC04_07550 ddf2f8644d8221b0cfa43897af3c22b7 874 Gene3D G3DSA:3.30.1360.40 244 341 7.8E-189 T 11-10-2018 ATC04_10050 de053ac0e715310958e3f9193118c789 189 SMART SM00479 1 167 1.2E-9 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ATC04_10050 de053ac0e715310958e3f9193118c789 189 Gene3D G3DSA:3.30.420.10 1 168 7.7E-55 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_10050 de053ac0e715310958e3f9193118c789 189 Pfam PF00929 Exonuclease 1 157 7.8E-18 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ATC04_10050 de053ac0e715310958e3f9193118c789 189 SUPERFAMILY SSF53098 1 164 1.77E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_05835 76fb728ba9f0f06912bae0b69dcb0a00 625 Pfam PF12708 Pectate lyase superfamily protein 184 492 5.4E-8 T 11-10-2018 IPR024535 Pectate lyase superfamily protein ATC04_05835 76fb728ba9f0f06912bae0b69dcb0a00 625 SUPERFAMILY SSF51126 453 611 3.59E-9 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor ATC04_05835 76fb728ba9f0f06912bae0b69dcb0a00 625 SMART SM00710 475 496 46.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ATC04_05835 76fb728ba9f0f06912bae0b69dcb0a00 625 SMART SM00710 368 401 2100.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ATC04_05835 76fb728ba9f0f06912bae0b69dcb0a00 625 SMART SM00710 404 426 1300.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ATC04_05835 76fb728ba9f0f06912bae0b69dcb0a00 625 SMART SM00710 524 544 2500.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ATC04_05835 76fb728ba9f0f06912bae0b69dcb0a00 625 SMART SM00710 452 474 22.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ATC04_05835 76fb728ba9f0f06912bae0b69dcb0a00 625 SMART SM00710 545 566 850.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ATC04_05835 76fb728ba9f0f06912bae0b69dcb0a00 625 SUPERFAMILY SSF51126 182 501 4.29E-35 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor ATC04_05835 76fb728ba9f0f06912bae0b69dcb0a00 625 Gene3D G3DSA:2.160.20.10 468 623 9.7E-7 T 11-10-2018 IPR012334 Pectin lyase fold ATC04_05835 76fb728ba9f0f06912bae0b69dcb0a00 625 Gene3D G3DSA:2.160.20.10 183 467 3.1E-57 T 11-10-2018 IPR012334 Pectin lyase fold ATC04_12980 acb3a83ed6db097909728c6b6d87b6bf 341 SUPERFAMILY SSF53901 52 341 6.67E-37 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_12980 acb3a83ed6db097909728c6b6d87b6bf 341 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 255 338 9.5E-16 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ATC04_12980 acb3a83ed6db097909728c6b6d87b6bf 341 Gene3D G3DSA:3.40.47.10 205 341 2.2E-31 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_12980 acb3a83ed6db097909728c6b6d87b6bf 341 Gene3D G3DSA:3.40.47.10 1 204 1.2E-61 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_12980 acb3a83ed6db097909728c6b6d87b6bf 341 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 123 201 1.2E-9 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ATC04_06050 74304b02d7eff896fdff02b224c678ae 389 Pfam PF01757 Acyltransferase family 19 335 4.6E-23 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ATC04_01500 518b7cb9f9b98e317ec28c2aa5b33a55 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 3.7E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01500 518b7cb9f9b98e317ec28c2aa5b33a55 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.7E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01500 518b7cb9f9b98e317ec28c2aa5b33a55 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 3.7E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01500 518b7cb9f9b98e317ec28c2aa5b33a55 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 3.7E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01500 518b7cb9f9b98e317ec28c2aa5b33a55 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 3.7E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01500 518b7cb9f9b98e317ec28c2aa5b33a55 300 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 158 186 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_01500 518b7cb9f9b98e317ec28c2aa5b33a55 300 SUPERFAMILY SSF51735 5 258 5.29E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01500 518b7cb9f9b98e317ec28c2aa5b33a55 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 2.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01500 518b7cb9f9b98e317ec28c2aa5b33a55 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 2.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01500 518b7cb9f9b98e317ec28c2aa5b33a55 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 2.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01500 518b7cb9f9b98e317ec28c2aa5b33a55 300 Gene3D G3DSA:3.40.50.720 4 300 1.1E-79 T 11-10-2018 ATC04_01500 518b7cb9f9b98e317ec28c2aa5b33a55 300 Pfam PF00106 short chain dehydrogenase 9 209 5.2E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 Gene3D G3DSA:1.10.10.10 329 412 9.8E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 Pfam PF04542 Sigma-70 region 2 179 248 2.0E-22 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 175 411 5.6E-113 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 18 412 30.883 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 Pfam PF04539 Sigma-70 region 3 258 334 2.7E-29 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 175 400 3.7E-36 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 Pfam PF00140 Sigma-70 factor, region 1.2 113 146 2.1E-13 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 Pfam PF04545 Sigma-70, region 4 347 400 3.2E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 SUPERFAMILY SSF88659 252 325 1.85E-21 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 SUPERFAMILY SSF88659 310 411 1.83E-27 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 Gene3D G3DSA:1.10.10.10 252 327 4.2E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 Gene3D G3DSA:1.10.601.10 111 148 1.2E-7 T 11-10-2018 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 Gene3D G3DSA:1.10.601.10 149 251 2.7E-50 T 11-10-2018 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 PRINTS PR00046 Major sigma-70 factor signature 203 216 2.5E-29 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 PRINTS PR00046 Major sigma-70 factor signature 351 363 2.5E-29 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 PRINTS PR00046 Major sigma-70 factor signature 227 235 2.5E-29 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 PRINTS PR00046 Major sigma-70 factor signature 387 398 2.5E-29 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 PRINTS PR00046 Major sigma-70 factor signature 372 387 2.5E-29 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 203 216 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 372 398 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ATC04_07515 7f6880b46543805e5f9b273572b2d7c5 412 SUPERFAMILY SSF88946 113 249 3.03E-51 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_17230 ba5408fe335b72c81f35af2e453d8b41 550 SUPERFAMILY SSF52518 18 167 4.81E-25 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_17230 ba5408fe335b72c81f35af2e453d8b41 550 Gene3D G3DSA:3.40.50.970 2 168 2.6E-29 T 11-10-2018 ATC04_17230 ba5408fe335b72c81f35af2e453d8b41 550 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 163 8.0E-30 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ATC04_17230 ba5408fe335b72c81f35af2e453d8b41 550 Gene3D G3DSA:3.40.50.970 347 540 6.7E-38 T 11-10-2018 ATC04_17230 ba5408fe335b72c81f35af2e453d8b41 550 Gene3D G3DSA:3.40.50.1220 182 338 4.6E-23 T 11-10-2018 ATC04_17230 ba5408fe335b72c81f35af2e453d8b41 550 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 312 1.4E-14 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ATC04_17230 ba5408fe335b72c81f35af2e453d8b41 550 SUPERFAMILY SSF52467 147 326 3.27E-25 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ATC04_17230 ba5408fe335b72c81f35af2e453d8b41 550 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 378 519 5.5E-17 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ATC04_17230 ba5408fe335b72c81f35af2e453d8b41 550 SUPERFAMILY SSF52518 350 537 4.76E-33 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_16835 50ded57b5659f81aa7ae98f15b03e9ca 431 Pfam PF00709 Adenylosuccinate synthetase 4 421 1.0E-171 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ATC04_16835 50ded57b5659f81aa7ae98f15b03e9ca 431 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ATC04_16835 50ded57b5659f81aa7ae98f15b03e9ca 431 Gene3D G3DSA:3.90.170.10 265 428 1.1E-66 T 11-10-2018 ATC04_16835 50ded57b5659f81aa7ae98f15b03e9ca 431 SUPERFAMILY SSF52540 1 427 1.17E-166 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16835 50ded57b5659f81aa7ae98f15b03e9ca 431 Gene3D G3DSA:3.40.440.10 5 257 2.1E-92 T 11-10-2018 ATC04_16835 50ded57b5659f81aa7ae98f15b03e9ca 431 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ATC04_16835 50ded57b5659f81aa7ae98f15b03e9ca 431 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 431 193.439 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ATC04_16835 50ded57b5659f81aa7ae98f15b03e9ca 431 Gene3D G3DSA:1.10.300.10 106 205 2.1E-92 T 11-10-2018 ATC04_16835 50ded57b5659f81aa7ae98f15b03e9ca 431 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 425 2.6E-160 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ATC04_16835 50ded57b5659f81aa7ae98f15b03e9ca 431 SMART SM00788 3 422 5.9E-272 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ATC04_10610 1a27952bb582a21c2788b9bd8088bea3 344 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 102 246 5.5E-34 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ATC04_10610 1a27952bb582a21c2788b9bd8088bea3 344 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 102 246 1.2E-38 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ATC04_10610 1a27952bb582a21c2788b9bd8088bea3 344 Gene3D G3DSA:1.10.260.150 58 342 1.1E-71 T 11-10-2018 ATC04_06570 274f2350e9c315289b3142c204ee1b2e 173 Pfam PF11290 Protein of unknown function (DUF3090) 6 168 1.6E-58 T 11-10-2018 IPR021441 Protein of unknown function DUF3090 ATC04_06570 274f2350e9c315289b3142c204ee1b2e 173 TIGRFAM TIGR03847 TIGR03847: conserved hypothetical protein 4 169 1.2E-64 T 11-10-2018 IPR021441 Protein of unknown function DUF3090 ATC04_14485 128bc0040b5fe5dd93fe9cabf91545f3 260 SUPERFAMILY SSF54292 27 130 7.02E-26 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ATC04_14485 128bc0040b5fe5dd93fe9cabf91545f3 260 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 33 252 1.6E-76 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14485 128bc0040b5fe5dd93fe9cabf91545f3 260 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 30 135 2.5E-32 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14485 128bc0040b5fe5dd93fe9cabf91545f3 260 Pfam PF13183 4Fe-4S dicluster domain 170 242 7.3E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ATC04_14485 128bc0040b5fe5dd93fe9cabf91545f3 260 Gene3D G3DSA:1.10.1060.10 131 260 4.5E-46 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ATC04_14485 128bc0040b5fe5dd93fe9cabf91545f3 260 SUPERFAMILY SSF46548 131 256 1.92E-32 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ATC04_14485 128bc0040b5fe5dd93fe9cabf91545f3 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ATC04_14485 128bc0040b5fe5dd93fe9cabf91545f3 260 Gene3D G3DSA:3.10.20.30 23 130 5.1E-31 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ATC04_11460 508a16ae976a7e89bdf78f7f80533d40 642 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 615 45.013 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATC04_11460 508a16ae976a7e89bdf78f7f80533d40 642 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 516 527 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATC04_11460 508a16ae976a7e89bdf78f7f80533d40 642 SUPERFAMILY SSF143975 4 427 8.5E-131 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATC04_11460 508a16ae976a7e89bdf78f7f80533d40 642 Pfam PF00920 Dehydratase family 35 612 5.4E-215 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATC04_11460 508a16ae976a7e89bdf78f7f80533d40 642 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATC04_11460 508a16ae976a7e89bdf78f7f80533d40 642 SUPERFAMILY SSF52016 428 616 1.8E-60 T 11-10-2018 ATC04_11460 508a16ae976a7e89bdf78f7f80533d40 642 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 615 3.4E-234 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATC04_11460 508a16ae976a7e89bdf78f7f80533d40 642 Gene3D G3DSA:3.50.30.80 428 579 2.0E-55 T 11-10-2018 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 ProSitePatterns PS00436 Peroxidases active site signature. 89 100 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 253 263 - T 11-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 66 91 3.7E-47 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 51 64 3.7E-47 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 261 284 3.7E-47 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 476 502 3.7E-47 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 25 47 3.7E-47 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 21 725 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 Hamap MF_01961 Catalase-peroxidase [katG]. 4 724 39.546 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 Gene3D G3DSA:1.10.520.10 21 426 2.9E-210 T 11-10-2018 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 Pfam PF00141 Peroxidase 398 698 1.9E-35 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 Pfam PF00141 Peroxidase 76 391 4.2E-49 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 Gene3D G3DSA:1.10.520.10 429 723 1.9E-128 T 11-10-2018 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 Gene3D G3DSA:1.10.420.10 582 699 1.9E-128 T 11-10-2018 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 SUPERFAMILY SSF48113 426 721 3.68E-95 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 PRINTS PR00458 Haem peroxidase superfamily signature 149 166 1.3E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 PRINTS PR00458 Haem peroxidase superfamily signature 312 327 1.3E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 PRINTS PR00458 Haem peroxidase superfamily signature 89 103 1.3E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 PRINTS PR00458 Haem peroxidase superfamily signature 167 179 1.3E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 PRINTS PR00458 Haem peroxidase superfamily signature 253 268 1.3E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 Gene3D G3DSA:1.10.420.20 190 393 2.9E-210 T 11-10-2018 ATC04_16720 67295efeaab4aeb2fd730dbe7f2d6e00 727 SUPERFAMILY SSF48113 18 425 4.57E-148 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 ATC04_16920 20537f06f3befe86cb9e70387c8f04e7 426 PIRSF PIRSF038800 2 417 4.7E-146 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 ATC04_16920 20537f06f3befe86cb9e70387c8f04e7 426 TIGRFAM TIGR01814 kynureninase: kynureninase 12 410 1.9E-103 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 ATC04_16920 20537f06f3befe86cb9e70387c8f04e7 426 Pfam PF00266 Aminotransferase class-V 165 369 4.2E-15 T 11-10-2018 IPR000192 Aminotransferase class V domain ATC04_16920 20537f06f3befe86cb9e70387c8f04e7 426 SUPERFAMILY SSF53383 6 409 4.44E-87 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_16920 20537f06f3befe86cb9e70387c8f04e7 426 Gene3D G3DSA:3.40.640.10 44 313 3.2E-156 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_16920 20537f06f3befe86cb9e70387c8f04e7 426 Hamap MF_01970 Kynureninase [kynU]. 1 409 34.462 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 ATC04_16920 20537f06f3befe86cb9e70387c8f04e7 426 Gene3D G3DSA:3.90.1150.10 13 409 3.2E-156 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_05130 4d97dba7f0c40104358d41cf92aa5ee5 264 Pfam PF00633 Helix-hairpin-helix motif 110 137 5.1E-9 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 ATC04_05130 4d97dba7f0c40104358d41cf92aa5ee5 264 Hamap MF_00942 Endonuclease III [nth]. 7 220 37.08 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 ATC04_05130 4d97dba7f0c40104358d41cf92aa5ee5 264 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 45 179 1.2E-21 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATC04_05130 4d97dba7f0c40104358d41cf92aa5ee5 264 SUPERFAMILY SSF48150 14 220 2.51E-67 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATC04_05130 4d97dba7f0c40104358d41cf92aa5ee5 264 SMART SM00478 49 196 6.8E-61 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATC04_05130 4d97dba7f0c40104358d41cf92aa5ee5 264 SMART SM00525 197 217 8.7E-6 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 ATC04_05130 4d97dba7f0c40104358d41cf92aa5ee5 264 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 198 214 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ATC04_05130 4d97dba7f0c40104358d41cf92aa5ee5 264 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 198 214 9.3E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 ATC04_05130 4d97dba7f0c40104358d41cf92aa5ee5 264 ProSitePatterns PS01155 Endonuclease III family signature. 113 142 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 ATC04_05130 4d97dba7f0c40104358d41cf92aa5ee5 264 Gene3D G3DSA:1.10.340.30 32 143 3.2E-72 T 11-10-2018 ATC04_05130 4d97dba7f0c40104358d41cf92aa5ee5 264 Gene3D G3DSA:1.10.1670.10 26 214 3.2E-72 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ATC04_05130 4d97dba7f0c40104358d41cf92aa5ee5 264 TIGRFAM TIGR01083 nth: endonuclease III 15 205 3.8E-75 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 ATC04_16140 be9bb509e29940039bb1eb1155e0c1f0 428 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 3 426 22.457 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 ATC04_16140 be9bb509e29940039bb1eb1155e0c1f0 428 Pfam PF03616 Sodium/glutamate symporter 4 201 1.8E-67 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 ATC04_16140 be9bb509e29940039bb1eb1155e0c1f0 428 Pfam PF03616 Sodium/glutamate symporter 236 393 1.8E-53 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 ATC04_16990 cece5f70ab384ec31df2bc35dc017093 658 Gene3D G3DSA:3.30.200.20 3 89 6.1E-18 T 11-10-2018 ATC04_16990 cece5f70ab384ec31df2bc35dc017093 658 SUPERFAMILY SSF56112 13 291 7.05E-71 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ATC04_16990 cece5f70ab384ec31df2bc35dc017093 658 Pfam PF00069 Protein kinase domain 14 264 1.0E-49 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ATC04_16990 cece5f70ab384ec31df2bc35dc017093 658 SMART SM00220 14 271 3.6E-66 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ATC04_16990 cece5f70ab384ec31df2bc35dc017093 658 Gene3D G3DSA:1.10.510.10 90 276 4.2E-46 T 11-10-2018 ATC04_13465 c9ac1717a7cd2c4e94b545cd13fcdeef 427 Pfam PF13286 Phosphohydrolase-associated domain 324 414 2.3E-20 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain ATC04_13465 c9ac1717a7cd2c4e94b545cd13fcdeef 427 Pfam PF01966 HD domain 62 142 1.2E-14 T 11-10-2018 IPR006674 HD domain ATC04_13465 c9ac1717a7cd2c4e94b545cd13fcdeef 427 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 416 4.1E-82 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 ATC04_13465 c9ac1717a7cd2c4e94b545cd13fcdeef 427 SUPERFAMILY SSF109604 14 415 2.16E-55 T 11-10-2018 ATC04_13465 c9ac1717a7cd2c4e94b545cd13fcdeef 427 Gene3D G3DSA:1.10.3210.10 5 418 3.5E-88 T 11-10-2018 ATC04_13465 c9ac1717a7cd2c4e94b545cd13fcdeef 427 SMART SM00471 58 226 6.5E-11 T 11-10-2018 IPR003607 HD/PDEase domain ATC04_06335 58b62766b991cfa58e125065f98435de 399 SUPERFAMILY SSF50621 259 391 1.5E-40 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ATC04_06335 58b62766b991cfa58e125065f98435de 399 Gene3D G3DSA:3.20.20.10 31 244 1.7E-67 T 11-10-2018 IPR029066 PLP-binding barrel ATC04_06335 58b62766b991cfa58e125065f98435de 399 Pfam PF01168 Alanine racemase, N-terminal domain 29 250 2.8E-62 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 52 62 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 Gene3D G3DSA:2.40.37.10 248 397 1.7E-46 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ATC04_06335 58b62766b991cfa58e125065f98435de 399 SUPERFAMILY SSF51419 29 265 5.96E-61 T 11-10-2018 IPR029066 PLP-binding barrel ATC04_06335 58b62766b991cfa58e125065f98435de 399 TIGRFAM TIGR00492 alr: alanine racemase 27 390 4.9E-90 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 SMART SM01005 264 390 7.7E-53 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 Hamap MF_01201 Alanine racemase. 22 390 30.886 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 PRINTS PR00992 Alanine racemase signature 143 155 1.0E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 PRINTS PR00992 Alanine racemase signature 297 312 1.0E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 PRINTS PR00992 Alanine racemase signature 180 191 1.0E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 PRINTS PR00992 Alanine racemase signature 280 295 1.0E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 PRINTS PR00992 Alanine racemase signature 83 101 1.0E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 PRINTS PR00992 Alanine racemase signature 223 250 1.0E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 PRINTS PR00992 Alanine racemase signature 47 63 1.0E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 PRINTS PR00992 Alanine racemase signature 372 385 1.0E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 PRINTS PR00992 Alanine racemase signature 317 334 1.0E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_06335 58b62766b991cfa58e125065f98435de 399 Pfam PF00842 Alanine racemase, C-terminal domain 264 389 2.0E-38 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 SUPERFAMILY SSF51735 5 242 1.43E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.7E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 5.7E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 5.7E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 5.7E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 5.7E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.7E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 2.4E-69 T 11-10-2018 ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 175 0.0015 T 11-10-2018 ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 Gene3D G3DSA:3.40.50.720 1 245 2.0E-86 T 11-10-2018 ATC04_04660 bafff80c3f45d451c2475cd9706cd88d 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 PIRSF PIRSF000676 7 308 2.3E-73 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 Gene3D G3DSA:3.30.70.890 166 272 4.6E-75 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 SUPERFAMILY SSF55060 171 284 3.84E-25 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 SUPERFAMILY SSF54211 11 151 1.44E-22 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 TIGRFAM TIGR00191 thrB: homoserine kinase 11 304 7.5E-59 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 Hamap MF_00384 Homoserine kinase [thrB]. 12 307 27.274 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 Gene3D G3DSA:3.30.230.10 12 165 4.6E-75 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 92 103 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 Pfam PF00288 GHMP kinases N terminal domain 89 148 4.2E-10 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 Pfam PF08544 GHMP kinases C terminal 229 284 5.7E-6 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 PRINTS PR00958 Homoserine kinase signature 99 114 5.5E-36 T 11-10-2018 ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 PRINTS PR00958 Homoserine kinase signature 252 267 5.5E-36 T 11-10-2018 ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 PRINTS PR00958 Homoserine kinase signature 17 32 5.5E-36 T 11-10-2018 ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 PRINTS PR00958 Homoserine kinase signature 135 148 5.5E-36 T 11-10-2018 ATC04_11845 7d9e0dee06f695a598a72d1b8102a589 309 PRINTS PR00958 Homoserine kinase signature 175 192 5.5E-36 T 11-10-2018 ATC04_00230 3cd70ab556b693a438a3639394258307 300 SUPERFAMILY SSF51717 29 297 6.28E-88 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATC04_00230 3cd70ab556b693a438a3639394258307 300 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 71 84 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATC04_00230 3cd70ab556b693a438a3639394258307 300 Gene3D G3DSA:3.20.20.20 10 299 5.6E-102 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATC04_00230 3cd70ab556b693a438a3639394258307 300 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 37 296 1.1E-90 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 ATC04_00230 3cd70ab556b693a438a3639394258307 300 Pfam PF00809 Pterin binding enzyme 38 282 1.1E-79 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATC04_00230 3cd70ab556b693a438a3639394258307 300 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 37 52 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 120 6.3E-20 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 Gene3D G3DSA:3.40.50.10860 8 273 3.7E-79 T 11-10-2018 ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 SUPERFAMILY SSF51735 124 278 2.21E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 29.58 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 3.9E-50 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 3.9E-50 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 3.9E-50 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 3.9E-50 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 3.9E-50 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 3.9E-50 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 3.9E-50 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 279 1.4E-51 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 Gene3D G3DSA:3.40.50.720 7 258 3.7E-79 T 11-10-2018 ATC04_01655 9f278bd72c301457dbfb5891a2a13baf 286 SUPERFAMILY SSF53223 1 121 5.37E-21 T 11-10-2018 ATC04_14415 b78306cfcbae5c016ac3acf2ebbde9fb 402 Gene3D G3DSA:3.20.20.140 7 395 8.5E-101 T 11-10-2018 ATC04_14415 b78306cfcbae5c016ac3acf2ebbde9fb 402 Pfam PF00962 Adenosine/AMP deaminase 19 370 3.2E-73 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 ATC04_14415 b78306cfcbae5c016ac3acf2ebbde9fb 402 SUPERFAMILY SSF51556 16 383 1.93E-76 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_06640 6b14b85194ee727942b6a744aa0c8651 185 PIRSF PIRSF000190 139 180 1.4E-11 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ATC04_06640 6b14b85194ee727942b6a744aa0c8651 185 PIRSF PIRSF000190 10 141 4.6E-35 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ATC04_06640 6b14b85194ee727942b6a744aa0c8651 185 Gene3D G3DSA:2.30.110.10 140 180 7.6E-10 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ATC04_06640 6b14b85194ee727942b6a744aa0c8651 185 Gene3D G3DSA:2.30.110.10 16 139 2.6E-35 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ATC04_06640 6b14b85194ee727942b6a744aa0c8651 185 SUPERFAMILY SSF50475 22 178 5.8E-39 T 11-10-2018 ATC04_06640 6b14b85194ee727942b6a744aa0c8651 185 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 40 122 1.1E-17 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ATC04_06640 6b14b85194ee727942b6a744aa0c8651 185 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 144 177 1.5E-10 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ATC04_13115 95e794a303ec28497b463e059d8cf766 147 Pfam PF02576 RimP N-terminal domain 1 53 4.4E-8 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal ATC04_13115 95e794a303ec28497b463e059d8cf766 147 Pfam PF17384 RimP C-terminal SH3 domain 57 129 1.4E-7 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal ATC04_13115 95e794a303ec28497b463e059d8cf766 147 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 130 13.539 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 ATC04_13115 95e794a303ec28497b463e059d8cf766 147 SUPERFAMILY SSF75420 2 53 4.45E-9 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily ATC04_13115 95e794a303ec28497b463e059d8cf766 147 Gene3D G3DSA:3.30.300.70 1 51 1.3E-5 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily ATC04_00945 0e8282f989efd96b41890f2757ddb633 62 Gene3D G3DSA:1.10.150.20 4 61 1.5E-6 T 11-10-2018 ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 Gene3D G3DSA:2.60.120.10 306 384 1.0E-127 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 379 4.5E-70 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 Gene3D G3DSA:2.60.120.10 6 280 1.0E-127 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 122 130 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 PRINTS PR00714 Phosphomannose isomerase type I signature 260 279 1.0E-58 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 1.0E-58 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 PRINTS PR00714 Phosphomannose isomerase type I signature 122 145 1.0E-58 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 PRINTS PR00714 Phosphomannose isomerase type I signature 225 240 1.0E-58 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 PRINTS PR00714 Phosphomannose isomerase type I signature 241 260 1.0E-58 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 PRINTS PR00714 Phosphomannose isomerase type I signature 31 46 1.0E-58 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 PRINTS PR00714 Phosphomannose isomerase type I signature 77 98 1.0E-58 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 PRINTS PR00714 Phosphomannose isomerase type I signature 279 298 1.0E-58 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 Gene3D G3DSA:1.10.441.10 146 305 1.0E-127 T 11-10-2018 ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 Pfam PF01238 Phosphomannose isomerase type I 1 358 1.4E-70 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 SUPERFAMILY SSF51182 2 378 1.42E-87 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ATC04_14230 f494283b741ecd9fa7a46d8744c6265d 402 PIRSF PIRSF001480 1 401 1.8E-92 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 ATC04_13965 237ddf4f666b488377419521c5bfeb66 266 PIRSF PIRSF000477 1 266 9.0E-84 T 11-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 ATC04_13965 237ddf4f666b488377419521c5bfeb66 266 SUPERFAMILY SSF53167 11 266 3.06E-77 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 ATC04_13965 237ddf4f666b488377419521c5bfeb66 266 Gene3D G3DSA:3.40.50.1580 2 265 9.6E-90 T 11-10-2018 ATC04_13965 237ddf4f666b488377419521c5bfeb66 266 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 26 264 2.1E-73 T 11-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 ATC04_13965 237ddf4f666b488377419521c5bfeb66 266 TIGRFAM TIGR01698 PUNP: purine nucleotide phosphorylase 26 264 4.4E-100 T 11-10-2018 IPR011269 Putative purine nucleotide phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 ATC04_13965 237ddf4f666b488377419521c5bfeb66 266 Pfam PF01048 Phosphorylase superfamily 26 264 6.1E-38 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ATC04_00930 f2d89faad3a9bbb4e6891ac05a5439fd 454 Gene3D G3DSA:1.10.860.10 15 177 1.6E-59 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ATC04_00930 f2d89faad3a9bbb4e6891ac05a5439fd 454 SUPERFAMILY SSF48024 19 130 2.75E-37 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 ATC04_00930 f2d89faad3a9bbb4e6891ac05a5439fd 454 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 21 451 1.7E-166 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 ATC04_00930 f2d89faad3a9bbb4e6891ac05a5439fd 454 Gene3D G3DSA:3.40.50.300 179 453 1.5E-103 T 11-10-2018 ATC04_00930 f2d89faad3a9bbb4e6891ac05a5439fd 454 Pfam PF03796 DnaB-like helicase C terminal domain 196 449 6.6E-106 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 ATC04_00930 f2d89faad3a9bbb4e6891ac05a5439fd 454 Pfam PF00772 DnaB-like helicase N terminal domain 21 122 1.9E-34 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 ATC04_00930 f2d89faad3a9bbb4e6891ac05a5439fd 454 SUPERFAMILY SSF52540 194 442 8.98E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08590 d9241f202464caca7901ab2d95237280 1089 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 5 1080 13.564 T 11-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 SUPERFAMILY SSF52374 17 681 3.67E-126 T 11-10-2018 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.2E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 579 5.2E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 5.2E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 607 616 5.2E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 432 447 5.2E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 Gene3D G3DSA:1.10.730.10 690 869 1.9E-39 T 11-10-2018 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 Pfam PF08264 Anticodon-binding domain of tRNA 737 874 1.6E-20 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 682 2.3E-174 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 SUPERFAMILY SSF50677 212 434 1.99E-37 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 16 885 4.9E-249 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 Gene3D G3DSA:3.40.50.620 25 674 9.2E-225 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_08590 d9241f202464caca7901ab2d95237280 1089 SUPERFAMILY SSF47323 703 933 2.43E-38 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_08590 d9241f202464caca7901ab2d95237280 1089 Gene3D G3DSA:3.90.740.10 206 438 9.2E-225 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATC04_14170 55bdccd8814d858222a4c9267a4a1c04 478 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 251 452 3.3E-25 T 11-10-2018 IPR010178 Integral membrane protein 1906 ATC04_14170 55bdccd8814d858222a4c9267a4a1c04 478 Pfam PF07314 Protein of unknown function (DUF1461) 252 433 1.3E-26 T 11-10-2018 IPR010178 Integral membrane protein 1906 ATC04_03825 2108eb1181a78d7975fd32c76a2574ac 291 SUPERFAMILY SSF81345 7 264 1.28E-38 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_03825 2108eb1181a78d7975fd32c76a2574ac 291 Gene3D G3DSA:1.10.3470.10 46 241 1.1E-7 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_03825 2108eb1181a78d7975fd32c76a2574ac 291 Pfam PF00950 ABC 3 transport family 13 267 3.5E-79 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 ATC04_18335 b3cf1a5a26ba2e732ba19e0d82dc0205 535 Gene3D G3DSA:2.40.110.10 150 275 3.3E-29 T 11-10-2018 ATC04_18335 b3cf1a5a26ba2e732ba19e0d82dc0205 535 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 294 468 3.0E-36 T 11-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal ATC04_18335 b3cf1a5a26ba2e732ba19e0d82dc0205 535 Gene3D G3DSA:1.10.3140.10 1 148 2.3E-47 T 11-10-2018 ATC04_18335 b3cf1a5a26ba2e732ba19e0d82dc0205 535 SUPERFAMILY SSF47203 264 482 1.57E-50 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_18335 b3cf1a5a26ba2e732ba19e0d82dc0205 535 SUPERFAMILY SSF56645 1 271 7.5E-60 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_18335 b3cf1a5a26ba2e732ba19e0d82dc0205 535 Gene3D G3DSA:1.20.140.10 276 484 1.8E-79 T 11-10-2018 ATC04_18335 b3cf1a5a26ba2e732ba19e0d82dc0205 535 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 3 271 4.3E-62 T 11-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal ATC04_00285 2078f2d26683ad523f7284f05ba829a8 466 SUPERFAMILY SSF46785 15 86 4.77E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_00285 2078f2d26683ad523f7284f05ba829a8 466 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 84 3.1E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_00285 2078f2d26683ad523f7284f05ba829a8 466 Gene3D G3DSA:3.40.640.10 108 465 7.8E-67 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_00285 2078f2d26683ad523f7284f05ba829a8 466 SMART SM00345 26 85 4.7E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_00285 2078f2d26683ad523f7284f05ba829a8 466 Gene3D G3DSA:1.10.10.10 15 85 1.8E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_00285 2078f2d26683ad523f7284f05ba829a8 466 Pfam PF00155 Aminotransferase class I and II 150 454 2.5E-21 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATC04_00285 2078f2d26683ad523f7284f05ba829a8 466 SUPERFAMILY SSF53383 109 463 3.27E-69 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_16275 fa309c5a037bf3901f9cf73ad13b9009 424 Pfam PF01266 FAD dependent oxidoreductase 8 403 2.2E-56 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATC04_16275 fa309c5a037bf3901f9cf73ad13b9009 424 Gene3D G3DSA:3.30.9.10 150 365 1.4E-42 T 11-10-2018 ATC04_16275 fa309c5a037bf3901f9cf73ad13b9009 424 SUPERFAMILY SSF54373 279 365 1.31E-11 T 11-10-2018 ATC04_16275 fa309c5a037bf3901f9cf73ad13b9009 424 Gene3D G3DSA:3.50.50.60 7 73 5.6E-17 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_16275 fa309c5a037bf3901f9cf73ad13b9009 424 Gene3D G3DSA:3.50.50.60 204 405 1.4E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_16275 fa309c5a037bf3901f9cf73ad13b9009 424 SUPERFAMILY SSF51905 8 422 4.79E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00120 7b15f7fcdad81c26bc6683aa43e05ff3 148 Pfam PF08818 Domain of unknown function (DU1801) 56 146 2.4E-8 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 ATC04_00120 7b15f7fcdad81c26bc6683aa43e05ff3 148 SUPERFAMILY SSF159888 48 100 2.49E-9 T 11-10-2018 ATC04_05415 33269f3b07fe9615291a04a4e32b6de6 148 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 123 2.2E-21 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 ATC04_05415 33269f3b07fe9615291a04a4e32b6de6 148 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 22 141 4.1E-36 T 11-10-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 ATC04_05415 33269f3b07fe9615291a04a4e32b6de6 148 Pfam PF03061 Thioesterase superfamily 50 123 3.7E-10 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ATC04_05415 33269f3b07fe9615291a04a4e32b6de6 148 SUPERFAMILY SSF54637 12 145 8.2E-28 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_05415 33269f3b07fe9615291a04a4e32b6de6 148 Gene3D G3DSA:3.10.129.10 4 147 2.7E-49 T 11-10-2018 ATC04_15500 74cf4587f151dc666779aa94b8e351b1 247 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 230 41.399 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 ATC04_15500 74cf4587f151dc666779aa94b8e351b1 247 SMART SM00855 4 189 6.0E-23 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_15500 74cf4587f151dc666779aa94b8e351b1 247 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 247 6.1E-109 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 ATC04_15500 74cf4587f151dc666779aa94b8e351b1 247 SUPERFAMILY SSF53254 1 221 5.34E-69 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_15500 74cf4587f151dc666779aa94b8e351b1 247 Gene3D G3DSA:3.40.50.1240 1 247 3.2E-81 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_15500 74cf4587f151dc666779aa94b8e351b1 247 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 144 209 2.2E-5 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_15500 74cf4587f151dc666779aa94b8e351b1 247 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 124 1.2E-26 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_15500 74cf4587f151dc666779aa94b8e351b1 247 PIRSF PIRSF000709 145 236 1.6 T 11-10-2018 ATC04_15500 74cf4587f151dc666779aa94b8e351b1 247 PIRSF PIRSF000709 2 109 0.015 T 11-10-2018 ATC04_15500 74cf4587f151dc666779aa94b8e351b1 247 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 ATC04_15170 1a5d1970ae8784cfbf2c0faef8756d3a 502 Gene3D G3DSA:3.30.450.40 136 265 8.0E-6 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_15170 1a5d1970ae8784cfbf2c0faef8756d3a 502 Pfam PF07905 Purine catabolism regulatory protein-like family 26 120 2.5E-18 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain ATC04_15170 1a5d1970ae8784cfbf2c0faef8756d3a 502 Pfam PF13556 PucR C-terminal helix-turn-helix domain 441 498 4.2E-15 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ATC04_15170 1a5d1970ae8784cfbf2c0faef8756d3a 502 Gene3D G3DSA:1.10.10.2840 374 501 3.0E-13 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 SUPERFAMILY SSF81665 151 672 3.27E-14 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 540 6.9E-28 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 561 6.9E-28 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 252 266 6.9E-28 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 627 639 6.9E-28 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 401 415 6.9E-28 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 604 623 6.9E-28 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 403 409 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 Gene3D G3DSA:2.70.150.20 196 307 1.1E-31 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 PRINTS PR00943 Copper-transporting ATPase signature 677 691 1.6E-10 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 PRINTS PR00943 Copper-transporting ATPase signature 325 339 1.6E-10 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 PRINTS PR00943 Copper-transporting ATPase signature 384 399 1.6E-10 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 PRINTS PR00943 Copper-transporting ATPase signature 124 143 1.6E-10 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 PRINTS PR00943 Copper-transporting ATPase signature 195 213 1.6E-10 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 PRINTS PR00943 Copper-transporting ATPase signature 581 598 1.6E-10 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 121 713 1.1E-169 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 SUPERFAMILY SSF56784 399 709 9.49E-56 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 Gene3D G3DSA:3.40.50.1000 382 655 1.6E-87 T 11-10-2018 IPR023214 HAD superfamily ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 Gene3D G3DSA:3.40.1110.10 412 536 1.6E-87 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 Pfam PF00702 haloacid dehalogenase-like hydrolase 397 617 3.1E-40 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 Pfam PF00122 E1-E2 ATPase 203 380 5.1E-46 T 11-10-2018 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 139 711 1.7E-170 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 SUPERFAMILY SSF81653 205 302 2.75E-21 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ATC04_01155 cab6b30d1fe910fb4d5b13c3dcfaeb24 723 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 175 682 2.8E-80 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ATC04_06360 3665aa4fe50b0a03a646b0aac1caaece 382 Gene3D G3DSA:3.30.590.20 2 379 9.4E-104 T 11-10-2018 ATC04_06360 3665aa4fe50b0a03a646b0aac1caaece 382 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 382 90.252 T 11-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ATC04_06360 3665aa4fe50b0a03a646b0aac1caaece 382 SUPERFAMILY SSF55931 4 376 2.26E-109 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ATC04_06360 3665aa4fe50b0a03a646b0aac1caaece 382 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 15 300 2.7E-66 T 11-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ATC04_06360 3665aa4fe50b0a03a646b0aac1caaece 382 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 305 1.5E-98 T 11-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ATC04_07725 a970145cc0bab4e03d2a75c7e07fabf5 402 Pfam PF00108 Thiolase, N-terminal domain 7 258 7.9E-53 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ATC04_07725 a970145cc0bab4e03d2a75c7e07fabf5 402 SUPERFAMILY SSF53901 269 391 7.63E-36 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_07725 a970145cc0bab4e03d2a75c7e07fabf5 402 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ATC04_07725 a970145cc0bab4e03d2a75c7e07fabf5 402 Pfam PF02803 Thiolase, C-terminal domain 269 391 1.3E-36 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ATC04_07725 a970145cc0bab4e03d2a75c7e07fabf5 402 Gene3D G3DSA:3.40.47.10 136 385 2.0E-116 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_07725 a970145cc0bab4e03d2a75c7e07fabf5 402 SUPERFAMILY SSF53901 6 267 1.5E-55 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_07725 a970145cc0bab4e03d2a75c7e07fabf5 402 Gene3D G3DSA:3.40.47.10 7 273 2.0E-116 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_07725 a970145cc0bab4e03d2a75c7e07fabf5 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 391 1.5E-122 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_07725 a970145cc0bab4e03d2a75c7e07fabf5 402 PIRSF PIRSF000429 1 394 3.3E-120 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_01110 836fb66d66843e86e9f4d5ce1a1000da 309 SUPERFAMILY SSF55945 1 104 1.38E-13 T 11-10-2018 ATC04_01110 836fb66d66843e86e9f4d5ce1a1000da 309 SMART SM01009 1 123 4.8E-22 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal ATC04_01110 836fb66d66843e86e9f4d5ce1a1000da 309 Gene3D G3DSA:1.10.340.30 125 249 2.6E-26 T 11-10-2018 ATC04_01110 836fb66d66843e86e9f4d5ce1a1000da 309 SUPERFAMILY SSF48150 114 305 1.41E-30 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATC04_01110 836fb66d66843e86e9f4d5ce1a1000da 309 Pfam PF06029 AlkA N-terminal domain 1 123 9.4E-24 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal ATC04_01110 836fb66d66843e86e9f4d5ce1a1000da 309 Gene3D G3DSA:3.30.310.20 1 123 6.0E-20 T 11-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily ATC04_01110 836fb66d66843e86e9f4d5ce1a1000da 309 Gene3D G3DSA:1.10.1670.10 269 309 3.9E-9 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ATC04_01110 836fb66d66843e86e9f4d5ce1a1000da 309 SMART SM00478 133 308 1.2E-4 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATC04_11475 27ef1610d364a0a5c2dfcf0cebc30e2a 500 SUPERFAMILY SSF56529 15 206 1.44E-50 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_11475 27ef1610d364a0a5c2dfcf0cebc30e2a 500 SUPERFAMILY SSF89562 271 445 7.19E-35 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily ATC04_11475 27ef1610d364a0a5c2dfcf0cebc30e2a 500 Gene3D G3DSA:3.90.850.10 4 212 6.9E-55 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_11475 27ef1610d364a0a5c2dfcf0cebc30e2a 500 Gene3D G3DSA:3.50.30.100 236 460 7.3E-47 T 11-10-2018 ATC04_11475 27ef1610d364a0a5c2dfcf0cebc30e2a 500 Pfam PF03737 Aldolase/RraA 275 437 8.0E-32 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ATC04_11475 27ef1610d364a0a5c2dfcf0cebc30e2a 500 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 27 206 1.6E-45 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ATC04_11760 d45c935c2a723f0dbf7f2baec8683891 231 Hamap MF_00722 Endonuclease NucS [nucS]. 1 223 32.09 T 11-10-2018 IPR002793 Endonuclease NucS GO:0004519 ATC04_11760 d45c935c2a723f0dbf7f2baec8683891 231 Gene3D G3DSA:2.70.180.20 1 99 3.8E-18 T 11-10-2018 ATC04_11760 d45c935c2a723f0dbf7f2baec8683891 231 Gene3D G3DSA:3.40.1350.10 106 217 6.2E-26 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 ATC04_11760 d45c935c2a723f0dbf7f2baec8683891 231 Pfam PF01939 Endonuclease NucS 1 230 2.0E-76 T 11-10-2018 IPR002793 Endonuclease NucS GO:0004519 ATC04_17470 745b2945ae412eefae8f3142f097cbb7 200 Gene3D G3DSA:2.60.40.640 59 162 5.5E-6 T 11-10-2018 IPR014752 Arrestin, C-terminal ATC04_16645 f41b1d5e23cc9a1a24828101108e408e 222 Pfam PF01126 Heme oxygenase 8 209 1.1E-40 T 11-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_16645 f41b1d5e23cc9a1a24828101108e408e 222 SUPERFAMILY SSF48613 8 212 1.39E-42 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_16645 f41b1d5e23cc9a1a24828101108e408e 222 Gene3D G3DSA:1.20.910.10 3 212 9.2E-55 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_16645 f41b1d5e23cc9a1a24828101108e408e 222 PRINTS PR00088 Haem oxygenase signature 121 142 1.1E-26 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_16645 f41b1d5e23cc9a1a24828101108e408e 222 PRINTS PR00088 Haem oxygenase signature 195 213 1.1E-26 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_16645 f41b1d5e23cc9a1a24828101108e408e 222 PRINTS PR00088 Haem oxygenase signature 43 68 1.1E-26 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_16645 f41b1d5e23cc9a1a24828101108e408e 222 PRINTS PR00088 Haem oxygenase signature 163 184 1.1E-26 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_16645 f41b1d5e23cc9a1a24828101108e408e 222 PRINTS PR00088 Haem oxygenase signature 68 93 1.1E-26 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_16645 f41b1d5e23cc9a1a24828101108e408e 222 PRINTS PR00088 Haem oxygenase signature 8 33 1.1E-26 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_16645 f41b1d5e23cc9a1a24828101108e408e 222 PIRSF PIRSF000343 1 222 1.1E-53 T 11-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_08610 3f776afd3f9425f22545ab3b95c88c5a 73 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 49 1.7E-7 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM ATC04_08610 3f776afd3f9425f22545ab3b95c88c5a 73 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 49 2.4E-8 T 11-10-2018 ATC04_08610 3f776afd3f9425f22545ab3b95c88c5a 73 SUPERFAMILY SSF143120 2 48 3.14E-8 T 11-10-2018 IPR036165 YefM-like superfamily ATC04_08610 3f776afd3f9425f22545ab3b95c88c5a 73 Gene3D G3DSA:3.40.1620.40 1 50 1.6E-10 T 11-10-2018 ATC04_06150 abf7f99a0bdba20d7c86635555de00db 95 ProSitePatterns PS00056 Ribosomal protein S17 signature. 68 80 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06150 abf7f99a0bdba20d7c86635555de00db 95 Gene3D G3DSA:2.40.50.140 14 95 4.9E-34 T 11-10-2018 ATC04_06150 abf7f99a0bdba20d7c86635555de00db 95 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 22 88 1.0E-26 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06150 abf7f99a0bdba20d7c86635555de00db 95 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 17 88 7.3E-34 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06150 abf7f99a0bdba20d7c86635555de00db 95 Pfam PF00366 Ribosomal protein S17 22 89 9.5E-31 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06150 abf7f99a0bdba20d7c86635555de00db 95 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 17 92 23.779 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06150 abf7f99a0bdba20d7c86635555de00db 95 SUPERFAMILY SSF50249 17 94 2.83E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_06150 abf7f99a0bdba20d7c86635555de00db 95 PRINTS PR00973 Ribosomal protein S17 family signature 78 85 3.2E-10 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06150 abf7f99a0bdba20d7c86635555de00db 95 PRINTS PR00973 Ribosomal protein S17 family signature 36 59 3.2E-10 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06150 abf7f99a0bdba20d7c86635555de00db 95 PRINTS PR00973 Ribosomal protein S17 family signature 68 78 3.2E-10 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06465 0cd6bf9884f5af6780facc9794abbdd0 218 PIRSF PIRSF006806 21 213 7.0E-33 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ATC04_06465 0cd6bf9884f5af6780facc9794abbdd0 218 SUPERFAMILY SSF100950 25 216 8.37E-39 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_06465 0cd6bf9884f5af6780facc9794abbdd0 218 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 26 210 5.0E-32 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ATC04_06465 0cd6bf9884f5af6780facc9794abbdd0 218 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 26 210 2.4E-38 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ATC04_06465 0cd6bf9884f5af6780facc9794abbdd0 218 Gene3D G3DSA:3.40.50.10420 16 215 1.4E-40 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ATC04_05485 7e72bb55e3c939ab1b9c4406c52234a3 360 Gene3D G3DSA:3.40.50.920 227 357 4.8E-44 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ATC04_05485 7e72bb55e3c939ab1b9c4406c52234a3 360 Gene3D G3DSA:3.40.50.970 27 226 1.8E-74 T 11-10-2018 ATC04_05485 7e72bb55e3c939ab1b9c4406c52234a3 360 Pfam PF02780 Transketolase, C-terminal domain 228 349 2.0E-36 T 11-10-2018 IPR033248 Transketolase, C-terminal domain ATC04_05485 7e72bb55e3c939ab1b9c4406c52234a3 360 SUPERFAMILY SSF52922 228 355 1.19E-35 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ATC04_05485 7e72bb55e3c939ab1b9c4406c52234a3 360 SUPERFAMILY SSF52518 29 210 7.46E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_05485 7e72bb55e3c939ab1b9c4406c52234a3 360 SMART SM00861 30 205 3.2E-66 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ATC04_05485 7e72bb55e3c939ab1b9c4406c52234a3 360 Pfam PF02779 Transketolase, pyrimidine binding domain 29 203 1.0E-43 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ATC04_02285 8b90c6f198b6253e66226f6e9474cb52 684 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 5 179 3.8E-49 T 11-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 ATC04_02285 8b90c6f198b6253e66226f6e9474cb52 684 Pfam PF01968 Hydantoinase/oxoprolinase 200 487 6.8E-80 T 11-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 ATC04_02285 8b90c6f198b6253e66226f6e9474cb52 684 SUPERFAMILY SSF53067 5 481 2.24E-7 T 11-10-2018 ATC04_17415 21eb5818c39b67396edd3cb8f3e36f77 204 Gene3D G3DSA:1.20.58.220 13 204 3.5E-18 T 11-10-2018 IPR038078 PhoU-like domain superfamily ATC04_18105 3cd8b67aec8564e93840de81dc74c28d 271 Gene3D G3DSA:2.40.260.10 8 221 3.5E-64 T 11-10-2018 IPR023365 Sortase domain superfamily ATC04_18105 3cd8b67aec8564e93840de81dc74c28d 271 TIGRFAM TIGR01076 sortase_fam: sortase 87 220 8.8E-51 T 11-10-2018 IPR005754 Sortase family ATC04_18105 3cd8b67aec8564e93840de81dc74c28d 271 SUPERFAMILY SSF63817 75 213 3.92E-43 T 11-10-2018 IPR023365 Sortase domain superfamily ATC04_18105 3cd8b67aec8564e93840de81dc74c28d 271 Pfam PF04203 Sortase family 88 213 2.4E-27 T 11-10-2018 IPR005754 Sortase family ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 Gene3D G3DSA:3.40.50.300 352 508 1.3E-9 T 11-10-2018 ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 Gene3D G3DSA:3.40.50.300 953 1205 1.3E-43 T 11-10-2018 ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 SUPERFAMILY SSF52540 635 849 4.93E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 Gene3D G3DSA:3.40.50.300 597 870 1.8E-80 T 11-10-2018 ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 SMART SM00382 644 822 0.25 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 SMART SM00382 1242 1394 3.7E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 SMART SM00382 978 1139 1.4 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 Pfam PF01580 FtsK/SpoIIIE family 972 1144 3.6E-11 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 Pfam PF01580 FtsK/SpoIIIE family 637 826 1.1E-31 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 86 177 8.3E-13 T 11-10-2018 IPR032030 YscD, cytoplasmic domain ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 SUPERFAMILY SSF52540 1237 1377 6.54E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 Gene3D G3DSA:3.40.50.300 1214 1278 6.7E-8 T 11-10-2018 ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 SUPERFAMILY SSF49879 75 174 2.12E-17 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 Gene3D G3DSA:2.60.200.20 79 187 1.8E-18 T 11-10-2018 ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 SMART SM00240 102 152 6.4E-12 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ATC04_16985 693b702b16b10d1d83bf64547d5c038d 1425 SUPERFAMILY SSF52540 969 1143 2.54E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13150 491934bac4938f52c74f9fe740c02e3a 262 Pfam PF01925 Sulfite exporter TauE/SafE 16 254 4.4E-40 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ATC04_18170 cff7d0959c4a68ae0df201fd3df36b55 62 Pfam PF05532 CsbD-like 5 57 6.6E-16 T 11-10-2018 IPR008462 CsbD-like domain ATC04_18170 cff7d0959c4a68ae0df201fd3df36b55 62 Gene3D G3DSA:1.10.1470.10 4 60 1.4E-6 T 11-10-2018 IPR036629 YjbJ superfamily ATC04_18170 cff7d0959c4a68ae0df201fd3df36b55 62 SUPERFAMILY SSF69047 5 58 7.85E-9 T 11-10-2018 IPR036629 YjbJ superfamily ATC04_13285 3e7df78bb3feb309cdbe26738da5644d 163 SUPERFAMILY SSF54909 63 144 3.22E-15 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_13285 3e7df78bb3feb309cdbe26738da5644d 163 Pfam PF01037 Lrp/AsnC ligand binding domain 69 137 2.0E-15 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATC04_13285 3e7df78bb3feb309cdbe26738da5644d 163 Gene3D G3DSA:1.10.10.10 3 50 1.2E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_13285 3e7df78bb3feb309cdbe26738da5644d 163 SUPERFAMILY SSF46785 4 81 9.21E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_13285 3e7df78bb3feb309cdbe26738da5644d 163 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 1.0E-9 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_13285 3e7df78bb3feb309cdbe26738da5644d 163 SMART SM00344 4 109 1.5E-15 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATC04_13285 3e7df78bb3feb309cdbe26738da5644d 163 Gene3D G3DSA:3.30.70.920 56 147 2.8E-18 T 11-10-2018 ATC04_14260 4411850fdaeb0c3d401d9721d1ff8bc3 396 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 58 391 5.6E-68 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 ATC04_14260 4411850fdaeb0c3d401d9721d1ff8bc3 396 Gene3D G3DSA:3.20.20.140 56 395 3.5E-89 T 11-10-2018 ATC04_14260 4411850fdaeb0c3d401d9721d1ff8bc3 396 SUPERFAMILY SSF51556 51 393 1.77E-66 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 Gene3D G3DSA:3.40.50.300 2 215 1.0E-66 T 11-10-2018 ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 SUPERFAMILY SSF50447 223 316 4.86E-12 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 6 424 4.8E-145 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 PRINTS PR00315 GTP-binding elongation factor signature 143 152 3.8E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 PRINTS PR00315 GTP-binding elongation factor signature 106 117 3.8E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 PRINTS PR00315 GTP-binding elongation factor signature 90 100 3.8E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 PRINTS PR00315 GTP-binding elongation factor signature 7 20 3.8E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 PRINTS PR00315 GTP-binding elongation factor signature 70 78 3.8E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 SUPERFAMILY SSF50465 324 424 1.1E-20 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 Gene3D G3DSA:2.40.30.10 321 424 4.2E-22 T 11-10-2018 ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 Gene3D G3DSA:2.40.30.10 221 319 7.9E-15 T 11-10-2018 ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 Pfam PF00009 Elongation factor Tu GTP binding domain 5 193 8.6E-42 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 63 78 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site ATC04_08520 ab8614cc397bdd03b5fe60f190c05402 431 SUPERFAMILY SSF52540 5 210 3.47E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08030 eb050de22e786c42eaf43fc1b5ec6935 232 Gene3D G3DSA:1.10.10.10 1 79 8.9E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_08030 eb050de22e786c42eaf43fc1b5ec6935 232 Pfam PF03704 Bacterial transcriptional activator domain 128 224 1.6E-11 T 11-10-2018 IPR005158 Bacterial transcriptional activator domain ATC04_08030 eb050de22e786c42eaf43fc1b5ec6935 232 SMART SM01043 93 230 3.1E-11 T 11-10-2018 IPR005158 Bacterial transcriptional activator domain ATC04_08030 eb050de22e786c42eaf43fc1b5ec6935 232 Gene3D G3DSA:1.25.40.10 92 232 4.2E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_08030 eb050de22e786c42eaf43fc1b5ec6935 232 SUPERFAMILY SSF48452 126 230 4.46E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_05810 f179ae94c5ccc5d35620079a489a31cb 1380 SUPERFAMILY SSF53955 1201 1271 2.25E-10 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ATC04_05810 f179ae94c5ccc5d35620079a489a31cb 1380 SUPERFAMILY SSF51261 972 1095 8.24E-42 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_05810 f179ae94c5ccc5d35620079a489a31cb 1380 Gene3D G3DSA:1.10.530.10 1178 1282 1.3E-14 T 11-10-2018 ATC04_05810 f179ae94c5ccc5d35620079a489a31cb 1380 Gene3D G3DSA:2.70.70.10 958 1097 6.5E-39 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_05810 f179ae94c5ccc5d35620079a489a31cb 1380 Pfam PF01551 Peptidase family M23 994 1091 3.2E-26 T 11-10-2018 IPR016047 Peptidase M23 ATC04_05810 f179ae94c5ccc5d35620079a489a31cb 1380 Pfam PF01464 Transglycosylase SLT domain 1202 1269 4.6E-8 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 ATC04_13785 f15e7b9a4e3d5e9d08a637da0e74406b 177 Gene3D G3DSA:3.40.630.30 10 175 6.1E-25 T 11-10-2018 ATC04_13785 f15e7b9a4e3d5e9d08a637da0e74406b 177 SUPERFAMILY SSF55729 14 165 3.95E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_13785 f15e7b9a4e3d5e9d08a637da0e74406b 177 Pfam PF00583 Acetyltransferase (GNAT) family 43 152 4.1E-13 T 11-10-2018 IPR000182 GNAT domain ATC04_01065 09a742447ce40f73c7554baf4120f4ac 368 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 217 365 8.3E-20 T 11-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 ATC04_01065 09a742447ce40f73c7554baf4120f4ac 368 SUPERFAMILY SSF54197 211 367 9.36E-36 T 11-10-2018 IPR036265 HIT-like superfamily ATC04_01065 09a742447ce40f73c7554baf4120f4ac 368 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 52 367 2.4E-49 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 ATC04_01065 09a742447ce40f73c7554baf4120f4ac 368 Gene3D G3DSA:3.30.428.10 51 365 2.9E-92 T 11-10-2018 IPR036265 HIT-like superfamily ATC04_01065 09a742447ce40f73c7554baf4120f4ac 368 PIRSF PIRSF000808 45 368 1.4E-106 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 ATC04_01065 09a742447ce40f73c7554baf4120f4ac 368 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 51 205 2.1E-36 T 11-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 ATC04_01065 09a742447ce40f73c7554baf4120f4ac 368 Gene3D G3DSA:3.30.428.10 80 204 2.9E-92 T 11-10-2018 IPR036265 HIT-like superfamily ATC04_01065 09a742447ce40f73c7554baf4120f4ac 368 SUPERFAMILY SSF54197 50 205 5.61E-48 T 11-10-2018 IPR036265 HIT-like superfamily ATC04_01065 09a742447ce40f73c7554baf4120f4ac 368 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 180 197 - T 11-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 ATC04_12905 375a864a847e40e5fa70a4f6480b0e23 264 Gene3D G3DSA:1.10.10.10 7 87 7.4E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_12905 375a864a847e40e5fa70a4f6480b0e23 264 Gene3D G3DSA:3.30.450.40 88 264 3.2E-38 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_12905 375a864a847e40e5fa70a4f6480b0e23 264 SUPERFAMILY SSF46785 24 90 1.15E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_12905 375a864a847e40e5fa70a4f6480b0e23 264 SUPERFAMILY SSF55781 84 259 1.31E-36 T 11-10-2018 ATC04_12905 375a864a847e40e5fa70a4f6480b0e23 264 Pfam PF01614 Bacterial transcriptional regulator 142 254 1.5E-19 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ATC04_12905 375a864a847e40e5fa70a4f6480b0e23 264 SMART SM00346 20 109 1.6E-18 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_12905 375a864a847e40e5fa70a4f6480b0e23 264 Pfam PF09339 IclR helix-turn-helix domain 25 73 1.2E-12 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_03820 710c299f2116483a9233310256488ecb 251 SMART SM00382 35 229 9.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_03820 710c299f2116483a9233310256488ecb 251 Pfam PF00005 ABC transporter 26 174 1.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_03820 710c299f2116483a9233310256488ecb 251 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_03820 710c299f2116483a9233310256488ecb 251 SUPERFAMILY SSF52540 10 233 2.44E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03820 710c299f2116483a9233310256488ecb 251 Gene3D G3DSA:3.40.50.300 1 243 3.4E-60 T 11-10-2018 ATC04_12375 0eeee0a6f89cba0bbda74b386adfa601 220 Pfam PF00293 NUDIX domain 56 174 1.9E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_12375 0eeee0a6f89cba0bbda74b386adfa601 220 SUPERFAMILY SSF55811 21 193 2.71E-41 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_12375 0eeee0a6f89cba0bbda74b386adfa601 220 Gene3D G3DSA:3.90.79.10 18 219 1.2E-54 T 11-10-2018 ATC04_03100 fa5d47f8d6ae86a8b49a91180ddf9fd7 201 Gene3D G3DSA:3.40.50.12740 2 201 1.5E-57 T 11-10-2018 ATC04_03100 fa5d47f8d6ae86a8b49a91180ddf9fd7 201 SMART SM00421 138 195 3.3E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_03100 fa5d47f8d6ae86a8b49a91180ddf9fd7 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 8.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_03100 fa5d47f8d6ae86a8b49a91180ddf9fd7 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 8.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_03100 fa5d47f8d6ae86a8b49a91180ddf9fd7 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 8.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_03100 fa5d47f8d6ae86a8b49a91180ddf9fd7 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 5.7E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_03100 fa5d47f8d6ae86a8b49a91180ddf9fd7 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 155 182 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_03100 fa5d47f8d6ae86a8b49a91180ddf9fd7 201 Pfam PF00072 Response regulator receiver domain 4 116 1.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_03100 fa5d47f8d6ae86a8b49a91180ddf9fd7 201 SUPERFAMILY SSF52172 1 128 4.27E-31 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_03100 fa5d47f8d6ae86a8b49a91180ddf9fd7 201 SMART SM00448 2 115 3.6E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_03100 fa5d47f8d6ae86a8b49a91180ddf9fd7 201 SUPERFAMILY SSF46894 127 201 6.46E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_10170 ca73f59e4796de03039f8e4f010fbdc6 753 SUPERFAMILY SSF52540 462 726 1.98E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10170 ca73f59e4796de03039f8e4f010fbdc6 753 Gene3D G3DSA:3.40.50.300 13 439 2.5E-148 T 11-10-2018 ATC04_10170 ca73f59e4796de03039f8e4f010fbdc6 753 Gene3D G3DSA:1.20.1580.10 546 584 7.1E-99 T 11-10-2018 ATC04_10170 ca73f59e4796de03039f8e4f010fbdc6 753 SUPERFAMILY SSF52540 14 422 7.25E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10170 ca73f59e4796de03039f8e4f010fbdc6 753 Gene3D G3DSA:3.40.50.300 464 747 7.1E-99 T 11-10-2018 ATC04_10170 ca73f59e4796de03039f8e4f010fbdc6 753 Gene3D G3DSA:1.10.8.280 153 261 2.5E-148 T 11-10-2018 ATC04_10170 ca73f59e4796de03039f8e4f010fbdc6 753 ProSitePatterns PS00211 ABC transporters family signature. 645 659 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_10170 ca73f59e4796de03039f8e4f010fbdc6 753 Pfam PF00005 ABC transporter 470 672 7.5E-11 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_10170 ca73f59e4796de03039f8e4f010fbdc6 753 Gene3D G3DSA:1.20.1580.10 99 339 2.5E-148 T 11-10-2018 ATC04_13730 a2e6689e2a5864a745a42c2f04669670 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 453 1.6E-56 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ATC04_13730 a2e6689e2a5864a745a42c2f04669670 532 SUPERFAMILY SSF53850 57 511 3.08E-83 T 11-10-2018 ATC04_13730 a2e6689e2a5864a745a42c2f04669670 532 Gene3D G3DSA:3.10.105.10 296 505 2.4E-91 T 11-10-2018 ATC04_13730 a2e6689e2a5864a745a42c2f04669670 532 Gene3D G3DSA:3.40.190.10 56 510 2.4E-91 T 11-10-2018 ATC04_13730 a2e6689e2a5864a745a42c2f04669670 532 Gene3D G3DSA:3.90.76.10 67 193 2.4E-91 T 11-10-2018 ATC04_13730 a2e6689e2a5864a745a42c2f04669670 532 PIRSF PIRSF002741 1 516 1.7E-67 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ATC04_15510 a85a0320c1d38d7472672129a57e1d3e 385 Gene3D G3DSA:3.90.1150.10 259 385 1.5E-36 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_15510 a85a0320c1d38d7472672129a57e1d3e 385 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 383 5.8E-99 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_15510 a85a0320c1d38d7472672129a57e1d3e 385 Gene3D G3DSA:3.40.640.10 13 258 1.0E-67 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_15510 a85a0320c1d38d7472672129a57e1d3e 385 PIRSF PIRSF001434 2 385 1.6E-114 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_15510 a85a0320c1d38d7472672129a57e1d3e 385 SUPERFAMILY SSF53383 29 384 8.7E-84 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_13920 a0d6d672cee7b447e73b4d2e0b01f19b 428 SUPERFAMILY SSF56059 4 425 1.77E-51 T 11-10-2018 ATC04_13920 a0d6d672cee7b447e73b4d2e0b01f19b 428 Gene3D G3DSA:3.30.1490.330 292 377 7.8E-16 T 11-10-2018 ATC04_13920 a0d6d672cee7b447e73b4d2e0b01f19b 428 SUPERFAMILY SSF52440 191 307 6.04E-25 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ATC04_13920 a0d6d672cee7b447e73b4d2e0b01f19b 428 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 11 426 1.3E-98 T 11-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain ATC04_07650 2803419a8c1787a54f4d6bd935119e75 308 Pfam PF06314 Acetoacetate decarboxylase (ADC) 46 175 1.8E-13 T 11-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 ATC04_07650 2803419a8c1787a54f4d6bd935119e75 308 Gene3D G3DSA:2.40.400.10 39 195 3.0E-11 T 11-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 ATC04_07650 2803419a8c1787a54f4d6bd935119e75 308 SUPERFAMILY SSF160104 47 190 1.44E-18 T 11-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 ATC04_03320 d70fcaf6a9b42218b0fdeac9517bb71c 389 ProSitePatterns PS00737 Thiolases signature 2. 334 350 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ATC04_03320 d70fcaf6a9b42218b0fdeac9517bb71c 389 Pfam PF02803 Thiolase, C-terminal domain 266 387 2.6E-36 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ATC04_03320 d70fcaf6a9b42218b0fdeac9517bb71c 389 PIRSF PIRSF000429 1 389 1.1E-106 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_03320 d70fcaf6a9b42218b0fdeac9517bb71c 389 Gene3D G3DSA:3.40.47.10 125 385 1.5E-124 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_03320 d70fcaf6a9b42218b0fdeac9517bb71c 389 Gene3D G3DSA:3.40.47.10 5 271 1.5E-124 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_03320 d70fcaf6a9b42218b0fdeac9517bb71c 389 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 386 3.4E-114 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_03320 d70fcaf6a9b42218b0fdeac9517bb71c 389 Pfam PF00108 Thiolase, N-terminal domain 3 257 3.6E-81 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ATC04_03320 d70fcaf6a9b42218b0fdeac9517bb71c 389 ProSitePatterns PS00099 Thiolases active site. 370 383 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 ATC04_03320 d70fcaf6a9b42218b0fdeac9517bb71c 389 SUPERFAMILY SSF53901 3 265 4.41E-76 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_03320 d70fcaf6a9b42218b0fdeac9517bb71c 389 SUPERFAMILY SSF53901 266 386 4.36E-33 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_07865 ad1bc3380f41b5ea4c57243913ca9543 208 SUPERFAMILY SSF63380 1 89 1.11E-22 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ATC04_07865 ad1bc3380f41b5ea4c57243913ca9543 208 SUPERFAMILY SSF63380 94 201 2.81E-27 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ATC04_07865 ad1bc3380f41b5ea4c57243913ca9543 208 Pfam PF00677 Lumazine binding domain 3 87 1.5E-18 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATC04_07865 ad1bc3380f41b5ea4c57243913ca9543 208 Pfam PF00677 Lumazine binding domain 101 192 1.9E-21 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATC04_07865 ad1bc3380f41b5ea4c57243913ca9543 208 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 5.2E-55 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATC04_07865 ad1bc3380f41b5ea4c57243913ca9543 208 Gene3D G3DSA:2.40.30.20 1 89 4.7E-25 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_07865 ad1bc3380f41b5ea4c57243913ca9543 208 Gene3D G3DSA:2.40.30.20 103 206 1.4E-30 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_07865 ad1bc3380f41b5ea4c57243913ca9543 208 PIRSF PIRSF000498 1 207 6.0E-62 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATC04_10965 8e99f584b701ce5ed406cd26c1e8961a 377 PIRSF PIRSF000390 7 377 2.9E-105 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ATC04_10965 8e99f584b701ce5ed406cd26c1e8961a 377 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 27 371 5.0E-117 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ATC04_10965 8e99f584b701ce5ed406cd26c1e8961a 377 SUPERFAMILY SSF53383 30 375 4.21E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_10965 8e99f584b701ce5ed406cd26c1e8961a 377 Gene3D G3DSA:3.40.640.10 5 252 1.0E-79 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_10965 8e99f584b701ce5ed406cd26c1e8961a 377 Gene3D G3DSA:3.90.1150.10 255 377 2.3E-43 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_06630 c3011af0fdd0d8fb13df9fbba6a2be79 278 Gene3D G3DSA:3.60.15.10 4 230 2.2E-42 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_06630 c3011af0fdd0d8fb13df9fbba6a2be79 278 Pfam PF00753 Metallo-beta-lactamase superfamily 20 197 2.9E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_06630 c3011af0fdd0d8fb13df9fbba6a2be79 278 SMART SM00849 22 213 3.0E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_06630 c3011af0fdd0d8fb13df9fbba6a2be79 278 SUPERFAMILY SSF56281 5 246 2.47E-42 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_09945 815368651c33385f0e637b0aecb2d09d 306 Pfam PF12710 haloacid dehalogenase-like hydrolase 100 265 3.0E-23 T 11-10-2018 ATC04_09945 815368651c33385f0e637b0aecb2d09d 306 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 98 268 3.6E-27 T 11-10-2018 ATC04_09945 815368651c33385f0e637b0aecb2d09d 306 SUPERFAMILY SSF56784 97 301 9.92E-43 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_09945 815368651c33385f0e637b0aecb2d09d 306 Gene3D G3DSA:3.40.50.1000 35 305 1.9E-66 T 11-10-2018 IPR023214 HAD superfamily ATC04_09945 815368651c33385f0e637b0aecb2d09d 306 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 94 300 9.1E-67 T 11-10-2018 ATC04_04805 e39d27d528047956da84d5e55a751684 257 Pfam PF00005 ABC transporter 26 179 1.2E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_04805 e39d27d528047956da84d5e55a751684 257 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_04805 e39d27d528047956da84d5e55a751684 257 PIRSF PIRSF039085 7 255 1.5E-100 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ATC04_04805 e39d27d528047956da84d5e55a751684 257 SUPERFAMILY SSF52540 10 249 8.67E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_04805 e39d27d528047956da84d5e55a751684 257 SMART SM00382 35 227 2.1E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04805 e39d27d528047956da84d5e55a751684 257 Gene3D G3DSA:3.40.50.300 8 256 7.7E-74 T 11-10-2018 ATC04_10350 a3b2a8201043558296effd3ff497684c 233 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 119 131 3.7E-20 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ATC04_10350 a3b2a8201043558296effd3ff497684c 233 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 167 186 3.7E-20 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ATC04_10350 a3b2a8201043558296effd3ff497684c 233 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 42 58 3.7E-20 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ATC04_10350 a3b2a8201043558296effd3ff497684c 233 Gene3D G3DSA:2.10.109.10 51 210 1.4E-26 T 11-10-2018 ATC04_10350 a3b2a8201043558296effd3ff497684c 233 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 26 212 3.1E-39 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ATC04_10350 a3b2a8201043558296effd3ff497684c 233 Pfam PF00717 Peptidase S24-like 48 144 1.2E-11 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ATC04_10350 a3b2a8201043558296effd3ff497684c 233 ProSitePatterns PS00761 Signal peptidases I signature 3. 172 185 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 ATC04_10350 a3b2a8201043558296effd3ff497684c 233 SUPERFAMILY SSF51306 41 218 7.85E-46 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ATC04_10470 5f743d3f8533560ac31c163835b22018 520 SMART SM00963 1 86 1.6E-34 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATC04_10470 5f743d3f8533560ac31c163835b22018 520 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 436 3.4E-175 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 ATC04_10470 5f743d3f8533560ac31c163835b22018 520 Pfam PF00448 SRP54-type protein, GTPase domain 100 303 1.8E-69 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATC04_10470 5f743d3f8533560ac31c163835b22018 520 SUPERFAMILY SSF52540 42 364 4.55E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10470 5f743d3f8533560ac31c163835b22018 520 Gene3D G3DSA:1.10.260.30 336 459 9.0E-42 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ATC04_10470 5f743d3f8533560ac31c163835b22018 520 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 277 290 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATC04_10470 5f743d3f8533560ac31c163835b22018 520 Pfam PF02978 Signal peptide binding domain 337 434 6.4E-31 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ATC04_10470 5f743d3f8533560ac31c163835b22018 520 SUPERFAMILY SSF47446 336 437 1.19E-33 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ATC04_10470 5f743d3f8533560ac31c163835b22018 520 Gene3D G3DSA:3.40.50.300 90 293 1.0E-120 T 11-10-2018 ATC04_10470 5f743d3f8533560ac31c163835b22018 520 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 447 33.347 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 ATC04_10470 5f743d3f8533560ac31c163835b22018 520 Gene3D G3DSA:1.20.120.140 5 314 1.0E-120 T 11-10-2018 ATC04_10470 5f743d3f8533560ac31c163835b22018 520 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.7E-21 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATC04_10470 5f743d3f8533560ac31c163835b22018 520 SMART SM00962 100 304 8.8E-109 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATC04_10470 5f743d3f8533560ac31c163835b22018 520 SMART SM00382 99 309 6.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04815 dd55670b5acfc68aafe2d603056cafc3 268 SMART SM00062 47 265 5.4E-78 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ATC04_04815 dd55670b5acfc68aafe2d603056cafc3 268 Gene3D G3DSA:3.40.190.10 129 226 3.4E-70 T 11-10-2018 ATC04_04815 dd55670b5acfc68aafe2d603056cafc3 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 264 3.5E-62 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ATC04_04815 dd55670b5acfc68aafe2d603056cafc3 268 SUPERFAMILY SSF53850 7 265 2.67E-64 T 11-10-2018 ATC04_04815 dd55670b5acfc68aafe2d603056cafc3 268 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 69 82 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site ATC04_04815 dd55670b5acfc68aafe2d603056cafc3 268 Gene3D G3DSA:3.40.190.10 46 257 3.4E-70 T 11-10-2018 ATC04_03805 9eb894111e7fab558bc8bf68c370fa39 215 Gene3D G3DSA:3.40.1490.10 123 214 7.8E-13 T 11-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 ATC04_03805 9eb894111e7fab558bc8bf68c370fa39 215 Pfam PF01981 Peptidyl-tRNA hydrolase PTH2 127 207 1.3E-9 T 11-10-2018 IPR002833 Peptidyl-tRNA hydrolase, PTH2 GO:0004045 MetaCyc: PWY-6308 ATC04_03805 9eb894111e7fab558bc8bf68c370fa39 215 SUPERFAMILY SSF102462 127 210 2.96E-13 T 11-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 ATC04_01115 49e9ea6bbc3818a570ab5634f50dc858 228 Pfam PF00106 short chain dehydrogenase 5 186 2.6E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01115 49e9ea6bbc3818a570ab5634f50dc858 228 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_01115 49e9ea6bbc3818a570ab5634f50dc858 228 SUPERFAMILY SSF51735 5 213 5.55E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01115 49e9ea6bbc3818a570ab5634f50dc858 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 160 9.7E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01115 49e9ea6bbc3818a570ab5634f50dc858 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 9.7E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01115 49e9ea6bbc3818a570ab5634f50dc858 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 5.2E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01115 49e9ea6bbc3818a570ab5634f50dc858 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.2E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01115 49e9ea6bbc3818a570ab5634f50dc858 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 5.2E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01115 49e9ea6bbc3818a570ab5634f50dc858 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 5.2E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01115 49e9ea6bbc3818a570ab5634f50dc858 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 5.2E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01115 49e9ea6bbc3818a570ab5634f50dc858 228 Gene3D G3DSA:3.40.50.720 3 226 9.5E-57 T 11-10-2018 ATC04_01115 49e9ea6bbc3818a570ab5634f50dc858 228 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 177 7.1E-4 T 11-10-2018 ATC04_09465 dc570fd3c38c8fe0548c26bcb9b1bae0 580 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 47 63 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATC04_09465 dc570fd3c38c8fe0548c26bcb9b1bae0 580 SUPERFAMILY SSF89000 405 454 3.77E-15 T 11-10-2018 ATC04_09465 dc570fd3c38c8fe0548c26bcb9b1bae0 580 Gene3D G3DSA:3.30.160.270 394 575 2.0E-57 T 11-10-2018 ATC04_09465 dc570fd3c38c8fe0548c26bcb9b1bae0 580 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 250 263 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATC04_09465 dc570fd3c38c8fe0548c26bcb9b1bae0 580 SUPERFAMILY SSF110921 469 575 1.57E-32 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATC04_09465 dc570fd3c38c8fe0548c26bcb9b1bae0 580 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 11 577 1.9E-254 T 11-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATC04_09465 dc570fd3c38c8fe0548c26bcb9b1bae0 580 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 12 577 54.019 T 11-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATC04_09465 dc570fd3c38c8fe0548c26bcb9b1bae0 580 SUPERFAMILY SSF51569 29 337 6.78E-97 T 11-10-2018 ATC04_09465 dc570fd3c38c8fe0548c26bcb9b1bae0 580 Gene3D G3DSA:3.20.20.70 18 393 1.3E-156 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_09465 dc570fd3c38c8fe0548c26bcb9b1bae0 580 SMART SM00917 439 576 1.4E-30 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATC04_09465 dc570fd3c38c8fe0548c26bcb9b1bae0 580 Pfam PF00682 HMGL-like 40 320 1.2E-78 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ATC04_09465 dc570fd3c38c8fe0548c26bcb9b1bae0 580 Pfam PF08502 LeuA allosteric (dimerisation) domain 439 575 1.2E-25 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATC04_00720 8c89dd0fc8e2677c6c0342a1ffbcb235 361 PIRSF PIRSF015578 1 356 5.5E-93 T 11-10-2018 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 ATC04_00720 8c89dd0fc8e2677c6c0342a1ffbcb235 361 TIGRFAM TIGR03450 mycothiol_INO1: inositol 1-phosphate synthase 6 355 6.9E-212 T 11-10-2018 IPR017815 Myo-inositol 1-phosphate synthase, actinobacteria ATC04_00720 8c89dd0fc8e2677c6c0342a1ffbcb235 361 Gene3D G3DSA:3.30.360.10 192 301 7.2E-152 T 11-10-2018 ATC04_00720 8c89dd0fc8e2677c6c0342a1ffbcb235 361 SUPERFAMILY SSF51735 5 357 4.95E-96 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_00720 8c89dd0fc8e2677c6c0342a1ffbcb235 361 Gene3D G3DSA:3.40.50.720 6 354 7.2E-152 T 11-10-2018 ATC04_00720 8c89dd0fc8e2677c6c0342a1ffbcb235 361 Pfam PF01658 Myo-inositol-1-phosphate synthase 193 301 2.1E-31 T 11-10-2018 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 ATC04_00720 8c89dd0fc8e2677c6c0342a1ffbcb235 361 SUPERFAMILY SSF55347 192 300 2.09E-34 T 11-10-2018 ATC04_10475 9ccb8efb9b36cba6c84965851d47606e 479 Gene3D G3DSA:2.70.70.10 101 249 7.1E-40 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_10475 9ccb8efb9b36cba6c84965851d47606e 479 Pfam PF01551 Peptidase family M23 149 243 1.4E-22 T 11-10-2018 IPR016047 Peptidase M23 ATC04_10475 9ccb8efb9b36cba6c84965851d47606e 479 SUPERFAMILY SSF51261 120 247 2.88E-43 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_10475 9ccb8efb9b36cba6c84965851d47606e 479 PRINTS PR01217 Proline rich extensin signature 301 313 2.2E-10 T 11-10-2018 ATC04_10475 9ccb8efb9b36cba6c84965851d47606e 479 PRINTS PR01217 Proline rich extensin signature 271 287 2.2E-10 T 11-10-2018 ATC04_10475 9ccb8efb9b36cba6c84965851d47606e 479 PRINTS PR01217 Proline rich extensin signature 318 339 2.2E-10 T 11-10-2018 ATC04_10475 9ccb8efb9b36cba6c84965851d47606e 479 PRINTS PR01217 Proline rich extensin signature 372 389 2.2E-10 T 11-10-2018 ATC04_10475 9ccb8efb9b36cba6c84965851d47606e 479 PRINTS PR01217 Proline rich extensin signature 342 358 2.2E-10 T 11-10-2018 ATC04_16865 5340fe5bb4f7e30f201af6c0f8a45ae6 388 Gene3D G3DSA:3.50.50.60 12 370 1.2E-90 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_16865 5340fe5bb4f7e30f201af6c0f8a45ae6 388 SUPERFAMILY SSF54373 227 331 9.42E-13 T 11-10-2018 ATC04_16865 5340fe5bb4f7e30f201af6c0f8a45ae6 388 SUPERFAMILY SSF51905 11 373 1.94E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_16865 5340fe5bb4f7e30f201af6c0f8a45ae6 388 Gene3D G3DSA:3.30.9.10 93 329 1.2E-90 T 11-10-2018 ATC04_16865 5340fe5bb4f7e30f201af6c0f8a45ae6 388 Pfam PF01266 FAD dependent oxidoreductase 12 367 1.8E-41 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATC04_00715 ae1990d29495bbdaf23af665bf6f9a16 482 Gene3D G3DSA:3.30.460.10 15 154 9.5E-36 T 11-10-2018 ATC04_00715 ae1990d29495bbdaf23af665bf6f9a16 482 SUPERFAMILY SSF81891 155 472 1.7E-62 T 11-10-2018 ATC04_00715 ae1990d29495bbdaf23af665bf6f9a16 482 TIGRFAM TIGR02692 tRNA_CCA_actino: CCA tRNA nucleotidyltransferase 16 471 3.9E-219 T 11-10-2018 IPR014065 tRNA adenylyltransferase ATC04_00715 ae1990d29495bbdaf23af665bf6f9a16 482 TIGRFAM TIGR00277 HDIG: HDIG domain 255 333 2.6E-11 T 11-10-2018 IPR006675 HDIG domain ATC04_00715 ae1990d29495bbdaf23af665bf6f9a16 482 Gene3D G3DSA:1.10.3090.10 155 460 2.3E-43 T 11-10-2018 ATC04_00715 ae1990d29495bbdaf23af665bf6f9a16 482 Pfam PF01743 Poly A polymerase head domain 34 156 1.6E-31 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ATC04_00715 ae1990d29495bbdaf23af665bf6f9a16 482 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 185 244 1.0E-17 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ATC04_00715 ae1990d29495bbdaf23af665bf6f9a16 482 SUPERFAMILY SSF81301 5 151 6.21E-36 T 11-10-2018 ATC04_00715 ae1990d29495bbdaf23af665bf6f9a16 482 SMART SM00471 254 415 1.9E-6 T 11-10-2018 IPR003607 HD/PDEase domain ATC04_00715 ae1990d29495bbdaf23af665bf6f9a16 482 Pfam PF01966 HD domain 258 374 2.2E-11 T 11-10-2018 IPR006674 HD domain ATC04_08315 91b591e23b05740c7dd44f70b48c3050 114 Gene3D G3DSA:3.30.300.130 10 109 3.3E-28 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ATC04_08315 91b591e23b05740c7dd44f70b48c3050 114 SUPERFAMILY SSF117916 17 108 2.49E-26 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ATC04_08315 91b591e23b05740c7dd44f70b48c3050 114 Pfam PF01883 Iron-sulfur cluster assembly protein 17 80 3.0E-17 T 11-10-2018 IPR002744 MIP18 family-like ATC04_15345 224631eb87f21dafc46857053e94368f 352 Pfam PF00296 Luciferase-like monooxygenase 23 308 2.6E-47 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ATC04_15345 224631eb87f21dafc46857053e94368f 352 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 9 342 3.5E-145 T 11-10-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative ATC04_15345 224631eb87f21dafc46857053e94368f 352 SUPERFAMILY SSF51679 24 342 4.58E-74 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_15345 224631eb87f21dafc46857053e94368f 352 Gene3D G3DSA:3.20.20.30 2 348 7.6E-84 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_17305 f96e53d992f4ceb9d3102869a95586d3 327 Gene3D G3DSA:3.30.360.10 132 271 4.7E-122 T 11-10-2018 ATC04_17305 f96e53d992f4ceb9d3102869a95586d3 327 TIGRFAM TIGR01921 DAP-DH: diaminopimelate dehydrogenase 3 326 1.3E-139 T 11-10-2018 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 ATC04_17305 f96e53d992f4ceb9d3102869a95586d3 327 SUPERFAMILY SSF55347 124 274 2.29E-55 T 11-10-2018 ATC04_17305 f96e53d992f4ceb9d3102869a95586d3 327 PIRSF PIRSF025648 2 327 8.1E-137 T 11-10-2018 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 ATC04_17305 f96e53d992f4ceb9d3102869a95586d3 327 Gene3D G3DSA:3.40.50.720 5 311 4.7E-122 T 11-10-2018 ATC04_17305 f96e53d992f4ceb9d3102869a95586d3 327 Pfam PF16654 Diaminopimelic acid dehydrogenase C-terminal domain 123 276 1.9E-74 T 11-10-2018 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 ATC04_17305 f96e53d992f4ceb9d3102869a95586d3 327 SUPERFAMILY SSF51735 4 149 2.55E-25 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_04705 848e69f2401189e6d36bd9c96cabde09 308 SUPERFAMILY SSF161098 26 301 9.42E-45 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_04705 848e69f2401189e6d36bd9c96cabde09 308 Gene3D G3DSA:1.10.3720.10 29 306 5.6E-45 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_04705 848e69f2401189e6d36bd9c96cabde09 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 298 3.5E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_16900 e66f3ab5f3966425eb65d78e60d58cff 177 ProSitePatterns PS01081 TetR-type HTH domain signature. 12 43 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ATC04_16900 e66f3ab5f3966425eb65d78e60d58cff 177 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 46 6.2E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_16900 e66f3ab5f3966425eb65d78e60d58cff 177 SUPERFAMILY SSF48498 68 167 1.78E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_16900 e66f3ab5f3966425eb65d78e60d58cff 177 SUPERFAMILY SSF46689 1 52 3.03E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_16900 e66f3ab5f3966425eb65d78e60d58cff 177 Gene3D G3DSA:1.10.10.60 1 55 6.4E-21 T 11-10-2018 ATC04_16900 e66f3ab5f3966425eb65d78e60d58cff 177 Gene3D G3DSA:1.10.357.10 57 171 6.6E-6 T 11-10-2018 ATC04_14015 b9e80b1dab4a88ed14662accd70b82c4 430 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 239 258 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ATC04_14015 b9e80b1dab4a88ed14662accd70b82c4 430 SUPERFAMILY SSF53383 15 425 1.71E-118 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_14015 b9e80b1dab4a88ed14662accd70b82c4 430 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 18 429 6.4E-166 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ATC04_14015 b9e80b1dab4a88ed14662accd70b82c4 430 Pfam PF00266 Aminotransferase class-V 36 417 2.9E-133 T 11-10-2018 IPR000192 Aminotransferase class V domain ATC04_14015 b9e80b1dab4a88ed14662accd70b82c4 430 Gene3D G3DSA:3.40.640.10 47 318 8.5E-166 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_14015 b9e80b1dab4a88ed14662accd70b82c4 430 Gene3D G3DSA:3.90.1150.10 19 421 8.5E-166 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_08355 03d5ca2d5138bef5c8ac611bb71a201d 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.8E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_08355 03d5ca2d5138bef5c8ac611bb71a201d 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.8E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_08355 03d5ca2d5138bef5c8ac611bb71a201d 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.8E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_08355 03d5ca2d5138bef5c8ac611bb71a201d 148 Gene3D G3DSA:1.10.10.10 1 52 2.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_08355 03d5ca2d5138bef5c8ac611bb71a201d 148 SUPERFAMILY SSF54909 61 148 7.11E-16 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_08355 03d5ca2d5138bef5c8ac611bb71a201d 148 SUPERFAMILY SSF46785 1 60 1.16E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_08355 03d5ca2d5138bef5c8ac611bb71a201d 148 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.2E-17 T 11-10-2018 ATC04_08355 03d5ca2d5138bef5c8ac611bb71a201d 148 Pfam PF01037 Lrp/AsnC ligand binding domain 68 138 1.5E-15 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATC04_08355 03d5ca2d5138bef5c8ac611bb71a201d 148 SMART SM00344 1 108 4.8E-40 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATC04_08355 03d5ca2d5138bef5c8ac611bb71a201d 148 Gene3D G3DSA:3.30.70.920 53 144 9.8E-19 T 11-10-2018 ATC04_16805 4cacb18ae40c4d69cfdf1441a2010af5 143 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 7 107 1.4E-8 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase ATC04_16805 4cacb18ae40c4d69cfdf1441a2010af5 143 Gene3D G3DSA:3.30.530.20 5 142 1.1E-15 T 11-10-2018 IPR023393 START-like domain superfamily ATC04_16805 4cacb18ae40c4d69cfdf1441a2010af5 143 SUPERFAMILY SSF55961 4 141 1.98E-15 T 11-10-2018 ATC04_00710 c9979e11431abe7497ea670d5df81009 179 Pfam PF00293 NUDIX domain 52 158 2.4E-20 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_00710 c9979e11431abe7497ea670d5df81009 179 SUPERFAMILY SSF55811 36 172 2.3E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_00710 c9979e11431abe7497ea670d5df81009 179 PRINTS PR00502 NUDIX hydrolase family signature 80 95 6.7E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATC04_00710 c9979e11431abe7497ea670d5df81009 179 PRINTS PR00502 NUDIX hydrolase family signature 66 80 6.7E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATC04_00710 c9979e11431abe7497ea670d5df81009 179 Gene3D G3DSA:3.90.79.10 28 179 7.8E-32 T 11-10-2018 ATC04_00710 c9979e11431abe7497ea670d5df81009 179 ProSitePatterns PS00893 Nudix box signature. 71 92 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATC04_04635 b6cc7f0cec5df030677b4347e45e9534 454 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_04635 b6cc7f0cec5df030677b4347e45e9534 454 Pfam PF00202 Aminotransferase class-III 40 446 7.3E-97 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_04635 b6cc7f0cec5df030677b4347e45e9534 454 Gene3D G3DSA:3.90.1150.10 25 445 3.4E-134 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_04635 b6cc7f0cec5df030677b4347e45e9534 454 SUPERFAMILY SSF53383 18 446 9.76E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_04635 b6cc7f0cec5df030677b4347e45e9534 454 Gene3D G3DSA:3.40.640.10 74 339 3.4E-134 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_04635 b6cc7f0cec5df030677b4347e45e9534 454 PIRSF PIRSF000521 10 146 2.2E-9 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_04635 b6cc7f0cec5df030677b4347e45e9534 454 PIRSF PIRSF000521 137 438 2.5E-27 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_07620 10ad378423a551e2e44717f5300aa928 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 264 437 4.7E-13 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 ATC04_07620 10ad378423a551e2e44717f5300aa928 440 Gene3D G3DSA:3.40.1350.30 139 271 1.6E-59 T 11-10-2018 ATC04_07620 10ad378423a551e2e44717f5300aa928 440 SUPERFAMILY SSF53335 80 439 2.89E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_07620 10ad378423a551e2e44717f5300aa928 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 401 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site ATC04_07620 10ad378423a551e2e44717f5300aa928 440 Gene3D G3DSA:3.40.50.150 86 434 1.6E-59 T 11-10-2018 ATC04_07620 10ad378423a551e2e44717f5300aa928 440 Gene3D G3DSA:2.40.50.140 1 77 3.2E-14 T 11-10-2018 ATC04_07620 10ad378423a551e2e44717f5300aa928 440 SUPERFAMILY SSF50249 9 65 1.03E-8 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_13395 7e6c98058498c3b4baf831960c0abea5 371 Pfam PF00534 Glycosyl transferases group 1 178 320 4.8E-20 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ATC04_13395 7e6c98058498c3b4baf831960c0abea5 371 Gene3D G3DSA:3.40.50.2000 9 177 2.5E-6 T 11-10-2018 ATC04_13395 7e6c98058498c3b4baf831960c0abea5 371 Gene3D G3DSA:3.40.50.2000 178 351 3.6E-32 T 11-10-2018 ATC04_13395 7e6c98058498c3b4baf831960c0abea5 371 Pfam PF13439 Glycosyltransferase Family 4 67 168 1.7E-8 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ATC04_13395 7e6c98058498c3b4baf831960c0abea5 371 SUPERFAMILY SSF53756 14 348 1.08E-55 T 11-10-2018 ATC04_01470 c08844d86e1ede42d0ea3f31a3385d4b 146 Pfam PF12802 MarR family 28 82 1.1E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_01470 c08844d86e1ede42d0ea3f31a3385d4b 146 SUPERFAMILY SSF46785 18 137 6.94E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_01470 c08844d86e1ede42d0ea3f31a3385d4b 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 6.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_01470 c08844d86e1ede42d0ea3f31a3385d4b 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 6.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_01470 c08844d86e1ede42d0ea3f31a3385d4b 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 6.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_01470 c08844d86e1ede42d0ea3f31a3385d4b 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 6.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_01470 c08844d86e1ede42d0ea3f31a3385d4b 146 Gene3D G3DSA:1.10.10.10 10 141 9.8E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_01470 c08844d86e1ede42d0ea3f31a3385d4b 146 SMART SM00347 22 122 4.9E-4 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_02555 b4bd79b45927dd9e87d4019be64999f0 192 Gene3D G3DSA:1.20.5.1230 113 192 3.4E-7 T 11-10-2018 ATC04_02555 b4bd79b45927dd9e87d4019be64999f0 192 Gene3D G3DSA:1.20.120.20 1 90 4.6E-6 T 11-10-2018 ATC04_02555 b4bd79b45927dd9e87d4019be64999f0 192 SUPERFAMILY SSF58113 117 191 8.89E-8 T 11-10-2018 ATC04_02555 b4bd79b45927dd9e87d4019be64999f0 192 Pfam PF12277 Protein of unknown function (DUF3618) 3 47 2.9E-13 T 11-10-2018 IPR022062 Protein of unknown function DUF3618 ATC04_02555 b4bd79b45927dd9e87d4019be64999f0 192 SUPERFAMILY SSF58113 4 86 5.62E-5 T 11-10-2018 ATC04_01040 6091b3e487c71e798b7ebdc5391112d8 503 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 477 3.8E-44 T 11-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 ATC04_01040 6091b3e487c71e798b7ebdc5391112d8 503 Gene3D G3DSA:3.40.50.10940 2 175 9.8E-77 T 11-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 ATC04_01040 6091b3e487c71e798b7ebdc5391112d8 503 SUPERFAMILY SSF53743 5 328 3.14E-112 T 11-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 ATC04_01040 6091b3e487c71e798b7ebdc5391112d8 503 SUPERFAMILY SSF50443 330 499 4.97E-60 T 11-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal ATC04_01040 6091b3e487c71e798b7ebdc5391112d8 503 Pfam PF02610 L-arabinose isomerase 7 359 6.5E-169 T 11-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 ATC04_01040 6091b3e487c71e798b7ebdc5391112d8 503 PIRSF PIRSF001478 2 501 8.7E-225 T 11-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 ATC04_01040 6091b3e487c71e798b7ebdc5391112d8 503 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 9 305 1.0E-102 T 11-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 ATC04_01040 6091b3e487c71e798b7ebdc5391112d8 503 Hamap MF_00519 L-arabinose isomerase [araA]. 2 478 60.637 T 11-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 ATC04_04135 c2a38cd0a9332fba68869a3485dced5c 144 Gene3D G3DSA:2.60.40.790 1 133 7.1E-26 T 11-10-2018 IPR008978 HSP20-like chaperone ATC04_04135 c2a38cd0a9332fba68869a3485dced5c 144 SUPERFAMILY SSF49764 7 132 1.33E-26 T 11-10-2018 IPR008978 HSP20-like chaperone ATC04_04135 c2a38cd0a9332fba68869a3485dced5c 144 Pfam PF00011 Hsp20/alpha crystallin family 34 130 3.8E-19 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain ATC04_06775 f57051d2480052cabd7e325e71d9815c 424 Gene3D G3DSA:3.40.50.2000 1 237 3.8E-34 T 11-10-2018 ATC04_06775 f57051d2480052cabd7e325e71d9815c 424 Gene3D G3DSA:3.40.50.2000 238 399 1.1E-38 T 11-10-2018 ATC04_06775 f57051d2480052cabd7e325e71d9815c 424 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 215 389 5.6E-10 T 11-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 ATC04_06775 f57051d2480052cabd7e325e71d9815c 424 SUPERFAMILY SSF53756 1 416 7.59E-74 T 11-10-2018 ATC04_08135 7c54ce8b64a45e32f7865f71279c89dc 217 Pfam PF00753 Metallo-beta-lactamase superfamily 20 193 3.1E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_08135 7c54ce8b64a45e32f7865f71279c89dc 217 SUPERFAMILY SSF56281 12 211 2.3E-39 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_08135 7c54ce8b64a45e32f7865f71279c89dc 217 Gene3D G3DSA:3.60.15.10 7 215 7.2E-45 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_08135 7c54ce8b64a45e32f7865f71279c89dc 217 SMART SM00849 20 196 7.8E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_17840 2dcd552cbaceaa749b21cd00ebdf9c06 442 SUPERFAMILY SSF103473 21 419 3.01E-54 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_17840 2dcd552cbaceaa749b21cd00ebdf9c06 442 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 92 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_17840 2dcd552cbaceaa749b21cd00ebdf9c06 442 ProSitePatterns PS00216 Sugar transport proteins signature 1. 295 311 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_17840 2dcd552cbaceaa749b21cd00ebdf9c06 442 Pfam PF07690 Major Facilitator Superfamily 40 206 1.0E-20 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_17840 2dcd552cbaceaa749b21cd00ebdf9c06 442 Pfam PF07690 Major Facilitator Superfamily 246 429 9.2E-24 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_17840 2dcd552cbaceaa749b21cd00ebdf9c06 442 Gene3D G3DSA:1.20.1250.20 15 235 1.5E-26 T 11-10-2018 ATC04_17840 2dcd552cbaceaa749b21cd00ebdf9c06 442 Gene3D G3DSA:1.20.1250.20 236 439 3.2E-29 T 11-10-2018 ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 Gene3D G3DSA:1.10.287.1150 389 470 6.2E-26 T 11-10-2018 ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 387 1241 6.2E-297 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 13 48 2.3E-9 T 11-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 SUPERFAMILY SSF52518 894 1104 5.4E-46 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 Pfam PF02779 Transketolase, pyrimidine binding domain 906 1098 1.0E-54 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 123 357 4.9E-51 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 Pfam PF00676 Dehydrogenase E1 component 515 830 1.4E-57 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 PIRSF PIRSF000157 3 1244 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 Gene3D G3DSA:3.40.50.12470 865 1121 6.4E-155 T 11-10-2018 ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 SMART SM00861 906 1099 2.3E-51 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 SUPERFAMILY SSF52518 458 832 1.88E-82 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 Gene3D G3DSA:3.40.50.11610 1042 1240 6.4E-155 T 11-10-2018 ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 SUPERFAMILY SSF52777 112 357 8.9E-55 T 11-10-2018 ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 Gene3D G3DSA:3.40.50.970 471 832 1.1E-144 T 11-10-2018 ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 Gene3D G3DSA:3.30.559.10 107 365 7.7E-52 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ATC04_11945 dc880079907c0ac382729dae7bdedbe8 1244 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 1104 1242 4.9E-40 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ATC04_07330 5ebffeb7f9fccbdbe06a14bc46c688be 367 ProSitePatterns PS01347 MraY family signature 1. 46 58 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_07330 5ebffeb7f9fccbdbe06a14bc46c688be 367 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 3.9E-6 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_07330 5ebffeb7f9fccbdbe06a14bc46c688be 367 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 360 23.142 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_07330 5ebffeb7f9fccbdbe06a14bc46c688be 367 Pfam PF00953 Glycosyl transferase family 4 88 285 1.9E-33 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 ATC04_07330 5ebffeb7f9fccbdbe06a14bc46c688be 367 ProSitePatterns PS01348 MraY family signature 2. 187 198 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_07330 5ebffeb7f9fccbdbe06a14bc46c688be 367 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 15 355 6.3E-91 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_07180 f4fb29d38d617befafc1e787580396c3 365 SUPERFAMILY SSF161098 121 347 3.01E-15 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_07180 f4fb29d38d617befafc1e787580396c3 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 140 365 2.2E-38 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_07905 6e1ab6528b760058319d9bde54daa7f4 522 Gene3D G3DSA:3.60.120.10 3 514 6.3E-177 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ATC04_07905 6e1ab6528b760058319d9bde54daa7f4 522 Pfam PF00425 chorismate binding enzyme 238 495 7.7E-92 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ATC04_07905 6e1ab6528b760058319d9bde54daa7f4 522 SUPERFAMILY SSF56322 22 503 6.28E-141 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ATC04_07905 6e1ab6528b760058319d9bde54daa7f4 522 PRINTS PR00095 Anthranilate synthase component I signature 357 370 3.6E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATC04_07905 6e1ab6528b760058319d9bde54daa7f4 522 PRINTS PR00095 Anthranilate synthase component I signature 437 451 3.6E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATC04_07905 6e1ab6528b760058319d9bde54daa7f4 522 PRINTS PR00095 Anthranilate synthase component I signature 452 466 3.6E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATC04_07905 6e1ab6528b760058319d9bde54daa7f4 522 PRINTS PR00095 Anthranilate synthase component I signature 343 356 3.6E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATC04_07905 6e1ab6528b760058319d9bde54daa7f4 522 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 32 503 1.7E-162 T 11-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATC04_07905 6e1ab6528b760058319d9bde54daa7f4 522 Pfam PF04715 Anthranilate synthase component I, N terminal region 33 174 2.7E-26 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATC04_04730 c67872cdb8811304d70685857e3ea011 101 Gene3D G3DSA:4.10.830.10 40 101 1.0E-22 T 11-10-2018 ATC04_04730 c67872cdb8811304d70685857e3ea011 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.542 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid ATC04_04730 c67872cdb8811304d70685857e3ea011 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.7E-24 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_04730 c67872cdb8811304d70685857e3ea011 101 SUPERFAMILY SSF57716 2 101 1.85E-33 T 11-10-2018 ATC04_11340 7a1e6b6366cbdc5888395eb40377daf8 113 Pfam PF00460 Flagella basal body rod protein 11 37 2.5E-10 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ATC04_11340 7a1e6b6366cbdc5888395eb40377daf8 113 PIRSF PIRSF002889 2 113 1.5E-19 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 ATC04_11340 7a1e6b6366cbdc5888395eb40377daf8 113 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site ATC04_02380 a5e4e6b8bb512b2adcf3e5d671c6aac2 818 Gene3D G3DSA:2.40.50.140 694 811 2.4E-39 T 11-10-2018 ATC04_02380 a5e4e6b8bb512b2adcf3e5d671c6aac2 818 Gene3D G3DSA:3.30.1490.70 506 688 3.0E-48 T 11-10-2018 ATC04_02380 a5e4e6b8bb512b2adcf3e5d671c6aac2 818 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 504 809 1.0E-79 T 11-10-2018 IPR014146 DNA ligase D, ligase domain ATC04_02380 a5e4e6b8bb512b2adcf3e5d671c6aac2 818 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 16 267 4.5E-76 T 11-10-2018 IPR014145 DNA ligase D, polymerase domain ATC04_02380 a5e4e6b8bb512b2adcf3e5d671c6aac2 818 Pfam PF04679 ATP dependent DNA ligase C terminal region 710 803 1.8E-27 T 11-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 ATC04_02380 a5e4e6b8bb512b2adcf3e5d671c6aac2 818 Pfam PF13298 DNA polymerase Ligase (LigD) 346 426 8.2E-30 T 11-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain ATC04_02380 a5e4e6b8bb512b2adcf3e5d671c6aac2 818 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 305 469 1.7E-43 T 11-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain ATC04_02380 a5e4e6b8bb512b2adcf3e5d671c6aac2 818 SUPERFAMILY SSF56091 492 690 2.33E-40 T 11-10-2018 ATC04_02380 a5e4e6b8bb512b2adcf3e5d671c6aac2 818 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 666 690 - T 11-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 ATC04_02380 a5e4e6b8bb512b2adcf3e5d671c6aac2 818 Pfam PF01068 ATP dependent DNA ligase domain 494 690 1.9E-32 T 11-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 ATC04_02380 a5e4e6b8bb512b2adcf3e5d671c6aac2 818 Gene3D G3DSA:3.90.920.30 22 308 7.2E-96 T 11-10-2018 ATC04_02380 a5e4e6b8bb512b2adcf3e5d671c6aac2 818 SUPERFAMILY SSF50249 694 810 3.66E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_02380 a5e4e6b8bb512b2adcf3e5d671c6aac2 818 Gene3D G3DSA:3.30.470.30 519 645 3.0E-48 T 11-10-2018 ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 SUPERFAMILY SSF54752 270 328 1.11E-20 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 Hamap MF_00268 Protein RecA [recA]. 7 331 51.794 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 ProSitePatterns PS00321 recA signature. 215 223 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 PRINTS PR00142 RecA protein signature 95 124 2.0E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 PRINTS PR00142 RecA protein signature 129 158 2.0E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 PRINTS PR00142 RecA protein signature 212 240 2.0E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 PRINTS PR00142 RecA protein signature 167 196 2.0E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 PRINTS PR00142 RecA protein signature 245 274 2.0E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 PRINTS PR00142 RecA protein signature 299 316 2.0E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 Gene3D G3DSA:3.40.50.300 28 269 1.8E-81 T 11-10-2018 ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 SMART SM00382 59 230 5.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 324 7.0E-170 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 SUPERFAMILY SSF52540 5 269 1.27E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 Gene3D G3DSA:3.30.250.10 270 347 2.7E-28 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal ATC04_12660 f6bd33ee7d28028c4cbaceff3b56efc2 350 Pfam PF00154 recA bacterial DNA recombination protein 9 270 8.2E-141 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATC04_13210 73c114b34162ae121243fc86d64c0fe3 404 PIRSF PIRSF006205 13 403 1.1E-138 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ATC04_13210 73c114b34162ae121243fc86d64c0fe3 404 Gene3D G3DSA:3.40.50.720 8 166 2.4E-44 T 11-10-2018 ATC04_13210 73c114b34162ae121243fc86d64c0fe3 404 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 16 150 7.9E-37 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ATC04_13210 73c114b34162ae121243fc86d64c0fe3 404 SUPERFAMILY SSF51735 13 166 3.74E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_13210 73c114b34162ae121243fc86d64c0fe3 404 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 16 399 42.702 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ATC04_13210 73c114b34162ae121243fc86d64c0fe3 404 SUPERFAMILY SSF55347 144 280 8.83E-52 T 11-10-2018 ATC04_13210 73c114b34162ae121243fc86d64c0fe3 404 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 15 398 2.0E-118 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ATC04_13210 73c114b34162ae121243fc86d64c0fe3 404 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 162 245 1.9E-34 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ATC04_13210 73c114b34162ae121243fc86d64c0fe3 404 Pfam PF13288 DXP reductoisomerase C-terminal domain 278 394 1.3E-34 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ATC04_13210 73c114b34162ae121243fc86d64c0fe3 404 SUPERFAMILY SSF69055 309 400 6.15E-26 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ATC04_13210 73c114b34162ae121243fc86d64c0fe3 404 Gene3D G3DSA:1.10.1740.10 318 402 7.5E-26 T 11-10-2018 ATC04_16030 81aa7af274c0b6f4a0367d8eb0199a4e 260 SUPERFAMILY SSF46785 11 83 1.39E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_16030 81aa7af274c0b6f4a0367d8eb0199a4e 260 Gene3D G3DSA:1.10.10.10 1 70 2.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16030 81aa7af274c0b6f4a0367d8eb0199a4e 260 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 10 256 5.1E-87 T 11-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 ATC04_16030 81aa7af274c0b6f4a0367d8eb0199a4e 260 Pfam PF01614 Bacterial transcriptional regulator 126 254 7.9E-28 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ATC04_16030 81aa7af274c0b6f4a0367d8eb0199a4e 260 SUPERFAMILY SSF55781 75 256 4.9E-43 T 11-10-2018 ATC04_16030 81aa7af274c0b6f4a0367d8eb0199a4e 260 Gene3D G3DSA:3.30.450.40 78 259 4.0E-51 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_16030 81aa7af274c0b6f4a0367d8eb0199a4e 260 Pfam PF09339 IclR helix-turn-helix domain 13 64 3.5E-16 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_16030 81aa7af274c0b6f4a0367d8eb0199a4e 260 SMART SM00346 11 99 1.3E-30 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_07535 eb6c3b46c277a7862394b1c6bb2347d0 533 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 498 1.1E-156 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ATC04_07535 eb6c3b46c277a7862394b1c6bb2347d0 533 PIRSF PIRSF006446 231 521 2.3E-44 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ATC04_07535 eb6c3b46c277a7862394b1c6bb2347d0 533 PIRSF PIRSF006446 1 215 5.9E-78 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Pfam PF08239 Bacterial SH3 domain 502 550 3.1E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Pfam PF08239 Bacterial SH3 domain 369 414 7.5E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Pfam PF08239 Bacterial SH3 domain 232 276 1.1E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Pfam PF08239 Bacterial SH3 domain 568 618 8.8E-7 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Pfam PF08239 Bacterial SH3 domain 432 483 2.1E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Pfam PF08239 Bacterial SH3 domain 298 347 5.7E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Pfam PF08239 Bacterial SH3 domain 644 694 5.9E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Pfam PF08239 Bacterial SH3 domain 32 81 1.1E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Gene3D G3DSA:2.30.30.40 228 285 2.1E-8 T 11-10-2018 ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Gene3D G3DSA:2.30.30.40 425 488 1.4E-9 T 11-10-2018 ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Gene3D G3DSA:2.30.30.40 290 352 1.4E-9 T 11-10-2018 ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Gene3D G3DSA:2.30.30.40 92 154 5.9E-9 T 11-10-2018 ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Gene3D G3DSA:2.30.30.40 561 622 2.0E-10 T 11-10-2018 ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Gene3D G3DSA:2.30.30.40 22 91 4.7E-14 T 11-10-2018 ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Gene3D G3DSA:2.30.30.40 355 418 1.4E-7 T 11-10-2018 ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 SMART SM00287 635 697 5.7E-4 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 SMART SM00287 155 217 1.0 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 SMART SM00287 558 621 0.028 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 SMART SM00287 358 419 0.12 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 SMART SM00287 423 486 3.5E-4 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 SMART SM00287 23 85 1.6E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 SMART SM00287 90 154 0.14 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 SMART SM00287 218 284 0.0098 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 SMART SM00287 493 554 5.5E-4 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 SMART SM00287 288 351 8.2E-4 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Pfam PF06347 Bacterial SH3 domain 163 214 2.5E-4 T 11-10-2018 IPR010466 Protein of unknown function DUF1058 ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Gene3D G3DSA:2.30.30.40 166 214 4.0E-6 T 11-10-2018 ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Gene3D G3DSA:2.30.30.40 499 551 9.8E-10 T 11-10-2018 ATC04_03810 6eab5795681eb5c40ec1f7565468321c 834 Gene3D G3DSA:2.30.30.40 640 694 1.2E-10 T 11-10-2018 ATC04_10725 b5f8002f80ba8c8c3e54e60c625240fc 254 SUPERFAMILY SSF56784 15 243 1.9E-44 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_10725 b5f8002f80ba8c8c3e54e60c625240fc 254 Gene3D G3DSA:1.20.120.1600 30 117 3.3E-38 T 11-10-2018 ATC04_10725 b5f8002f80ba8c8c3e54e60c625240fc 254 Pfam PF13419 Haloacid dehalogenase-like hydrolase 19 217 7.1E-28 T 11-10-2018 ATC04_10725 b5f8002f80ba8c8c3e54e60c625240fc 254 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 134 213 1.7E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ATC04_10725 b5f8002f80ba8c8c3e54e60c625240fc 254 Gene3D G3DSA:3.40.50.1000 19 223 3.3E-38 T 11-10-2018 IPR023214 HAD superfamily ATC04_10725 b5f8002f80ba8c8c3e54e60c625240fc 254 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 16 27 2.9E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ATC04_10725 b5f8002f80ba8c8c3e54e60c625240fc 254 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 145 2.9E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ATC04_10725 b5f8002f80ba8c8c3e54e60c625240fc 254 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 208 221 2.9E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ATC04_10725 b5f8002f80ba8c8c3e54e60c625240fc 254 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 162 178 2.9E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ATC04_11715 d88a01ab18e9ce9fd45c495dbdecc57b 588 SUPERFAMILY SSF52540 51 409 4.66E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11715 d88a01ab18e9ce9fd45c495dbdecc57b 588 SUPERFAMILY SSF52540 30 190 4.51E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11715 d88a01ab18e9ce9fd45c495dbdecc57b 588 Gene3D G3DSA:3.40.50.300 275 399 1.5E-15 T 11-10-2018 ATC04_11715 d88a01ab18e9ce9fd45c495dbdecc57b 588 SMART SM00382 49 203 0.0068 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_11715 d88a01ab18e9ce9fd45c495dbdecc57b 588 Pfam PF04851 Type III restriction enzyme, res subunit 33 186 9.5E-18 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ATC04_11715 d88a01ab18e9ce9fd45c495dbdecc57b 588 SMART SM00487 30 215 6.9E-12 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_11715 d88a01ab18e9ce9fd45c495dbdecc57b 588 Gene3D G3DSA:3.40.50.300 26 198 1.5E-21 T 11-10-2018 ATC04_05040 4a7216eb343622deb5437dfafb18b287 380 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 11 348 5.4E-123 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATC04_05040 4a7216eb343622deb5437dfafb18b287 380 Gene3D G3DSA:3.90.650.10 178 362 2.7E-57 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ATC04_05040 4a7216eb343622deb5437dfafb18b287 380 Pfam PF02769 AIR synthase related protein, C-terminal domain 182 348 9.0E-28 T 11-10-2018 IPR010918 PurM-like, C-terminal domain ATC04_05040 4a7216eb343622deb5437dfafb18b287 380 SUPERFAMILY SSF56042 178 349 2.24E-52 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ATC04_05040 4a7216eb343622deb5437dfafb18b287 380 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 11 358 41.355 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATC04_05040 4a7216eb343622deb5437dfafb18b287 380 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 169 6.7E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain ATC04_05040 4a7216eb343622deb5437dfafb18b287 380 Gene3D G3DSA:3.30.1330.10 10 176 7.2E-60 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ATC04_05040 4a7216eb343622deb5437dfafb18b287 380 SUPERFAMILY SSF55326 11 175 7.63E-44 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 SUPERFAMILY SSF51905 129 425 7.92E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 Gene3D G3DSA:3.30.1360.120 572 957 4.0E-92 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 247 256 1.5E-8 T 11-10-2018 ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 132 154 1.5E-8 T 11-10-2018 ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 Gene3D G3DSA:3.50.50.60 132 556 1.2E-76 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 152 5.7E-8 T 11-10-2018 ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 244 262 5.7E-8 T 11-10-2018 ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 Pfam PF01571 Aminomethyltransferase folate-binding domain 581 848 4.7E-74 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 24 106 1.8E-18 T 11-10-2018 ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 SUPERFAMILY SSF101790 874 966 1.46E-12 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 SUPERFAMILY SSF103025 575 864 2.04E-91 T 11-10-2018 ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 Gene3D G3DSA:1.10.10.1100 467 549 1.2E-76 T 11-10-2018 ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 853 954 1.0E-11 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 111 966 0.0 T 11-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 Gene3D G3DSA:3.10.20.440 16 94 4.0E-6 T 11-10-2018 ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 Gene3D G3DSA:3.50.50.60 256 382 1.2E-76 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 132 393 1.0E-11 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 PIRSF PIRSF037980 108 967 0.0 T 11-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 ATC04_01740 3be3d680b122e28e51d976a70137b2af 967 PIRSF PIRSF037980 7 110 6.4E-29 T 11-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 ATC04_03400 83f475ac626793ccf347c9b3bb6192aa 331 SUPERFAMILY SSF46785 6 52 1.19E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03400 83f475ac626793ccf347c9b3bb6192aa 331 SUPERFAMILY SSF54909 234 315 2.68E-7 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_03400 83f475ac626793ccf347c9b3bb6192aa 331 Pfam PF13404 AsnC-type helix-turn-helix domain 8 47 1.2E-9 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_03400 83f475ac626793ccf347c9b3bb6192aa 331 SMART SM00344 177 280 6.9E-4 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATC04_03400 83f475ac626793ccf347c9b3bb6192aa 331 SMART SM00344 7 109 9.3E-4 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATC04_03400 83f475ac626793ccf347c9b3bb6192aa 331 Gene3D G3DSA:3.30.70.920 227 318 5.6E-10 T 11-10-2018 ATC04_03400 83f475ac626793ccf347c9b3bb6192aa 331 Pfam PF01037 Lrp/AsnC ligand binding domain 69 139 1.2E-7 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATC04_03400 83f475ac626793ccf347c9b3bb6192aa 331 SUPERFAMILY SSF54909 65 148 1.14E-10 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_03400 83f475ac626793ccf347c9b3bb6192aa 331 Gene3D G3DSA:3.30.70.920 66 141 5.7E-12 T 11-10-2018 ATC04_03400 83f475ac626793ccf347c9b3bb6192aa 331 Gene3D G3DSA:1.10.10.10 7 53 8.9E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03400 83f475ac626793ccf347c9b3bb6192aa 331 SUPERFAMILY SSF46785 175 241 3.12E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_05180 ca28feb67eb62420bda7f34ccf9f8c1c 776 Gene3D G3DSA:3.40.50.300 39 257 3.2E-39 T 11-10-2018 ATC04_05180 ca28feb67eb62420bda7f34ccf9f8c1c 776 Pfam PF00270 DEAD/DEAH box helicase 60 233 2.5E-22 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATC04_05180 ca28feb67eb62420bda7f34ccf9f8c1c 776 Pfam PF09369 Domain of unknown function (DUF1998) 663 742 1.4E-21 T 11-10-2018 IPR018973 DEAD/DEAH-box helicase, putative ATC04_05180 ca28feb67eb62420bda7f34ccf9f8c1c 776 SMART SM00487 52 263 1.4E-26 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_05180 ca28feb67eb62420bda7f34ccf9f8c1c 776 Pfam PF00271 Helicase conserved C-terminal domain 292 402 1.5E-12 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_05180 ca28feb67eb62420bda7f34ccf9f8c1c 776 TIGRFAM TIGR03817 DECH_helic: helicase/secretion neighborhood putative DEAH-box helicase 21 769 0.0 T 11-10-2018 IPR022307 DEAD/DEAH-box helicase, putative, actinobacteria ATC04_05180 ca28feb67eb62420bda7f34ccf9f8c1c 776 SMART SM00490 321 402 6.1E-15 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_05180 ca28feb67eb62420bda7f34ccf9f8c1c 776 SUPERFAMILY SSF52540 66 414 7.59E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_05180 ca28feb67eb62420bda7f34ccf9f8c1c 776 Gene3D G3DSA:3.40.50.300 280 426 3.4E-22 T 11-10-2018 ATC04_03200 19ff8f93ba2097d9ba52b0bf791fd09c 707 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 3 51 1.3E-7 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_03200 19ff8f93ba2097d9ba52b0bf791fd09c 707 Gene3D G3DSA:2.40.40.20 587 707 1.0E-29 T 11-10-2018 ATC04_03200 19ff8f93ba2097d9ba52b0bf791fd09c 707 Pfam PF01568 Molydopterin dinucleotide binding domain 591 696 3.4E-27 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ATC04_03200 19ff8f93ba2097d9ba52b0bf791fd09c 707 Pfam PF00384 Molybdopterin oxidoreductase 55 489 9.6E-72 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_03200 19ff8f93ba2097d9ba52b0bf791fd09c 707 SUPERFAMILY SSF53706 3 576 5.76E-151 T 11-10-2018 ATC04_03200 19ff8f93ba2097d9ba52b0bf791fd09c 707 Gene3D G3DSA:3.40.228.10 134 341 3.2E-141 T 11-10-2018 ATC04_03200 19ff8f93ba2097d9ba52b0bf791fd09c 707 SUPERFAMILY SSF50692 552 698 2.05E-32 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ATC04_03200 19ff8f93ba2097d9ba52b0bf791fd09c 707 SMART SM00926 1 52 6.9E-7 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_03200 19ff8f93ba2097d9ba52b0bf791fd09c 707 Gene3D G3DSA:2.20.25.90 2 51 1.7E-7 T 11-10-2018 ATC04_03200 19ff8f93ba2097d9ba52b0bf791fd09c 707 Gene3D G3DSA:3.40.50.740 62 537 3.2E-141 T 11-10-2018 ATC04_00385 216e87394a7d9f5cf5d28cc461b1c401 213 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 210 22.671 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_00385 216e87394a7d9f5cf5d28cc461b1c401 213 Gene3D G3DSA:3.20.20.70 1 209 1.0E-52 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_00385 216e87394a7d9f5cf5d28cc461b1c401 213 Pfam PF02581 Thiamine monophosphate synthase 7 190 8.3E-45 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_00385 216e87394a7d9f5cf5d28cc461b1c401 213 SUPERFAMILY SSF51391 2 210 9.81E-46 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_00385 216e87394a7d9f5cf5d28cc461b1c401 213 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 6 205 6.9E-46 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_12065 5aff7fa6f371966b9b54efdbc5f3853f 469 Pfam PF13408 Recombinase zinc beta ribbon domain 280 321 9.0E-9 T 11-10-2018 IPR025827 Recombinase zinc beta ribbon domain ATC04_12065 5aff7fa6f371966b9b54efdbc5f3853f 469 Gene3D G3DSA:1.10.10.2600 143 267 1.3E-13 T 11-10-2018 IPR038109 DNA-binding recombinase domain superfamily ATC04_12065 5aff7fa6f371966b9b54efdbc5f3853f 469 Pfam PF00239 Resolvase, N terminal domain 9 156 9.8E-27 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_12065 5aff7fa6f371966b9b54efdbc5f3853f 469 Gene3D G3DSA:3.40.50.1390 6 142 3.8E-24 T 11-10-2018 ATC04_12065 5aff7fa6f371966b9b54efdbc5f3853f 469 SMART SM00857 9 158 1.5E-34 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_12065 5aff7fa6f371966b9b54efdbc5f3853f 469 SUPERFAMILY SSF53041 9 157 1.26E-23 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ATC04_12065 5aff7fa6f371966b9b54efdbc5f3853f 469 Pfam PF07508 Recombinase 179 264 1.6E-10 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 ATC04_17185 169f0923731c693d592730862bffba42 227 SUPERFAMILY SSF50447 7 87 9.18E-10 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ATC04_17185 169f0923731c693d592730862bffba42 227 SMART SM00863 178 220 1.7E-6 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ATC04_17185 169f0923731c693d592730862bffba42 227 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 213 4.2E-6 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ATC04_17185 169f0923731c693d592730862bffba42 227 Gene3D G3DSA:3.30.980.10 91 226 1.1E-13 T 11-10-2018 ATC04_17185 169f0923731c693d592730862bffba42 227 Gene3D G3DSA:2.40.30.130 1 90 1.1E-13 T 11-10-2018 ATC04_17185 169f0923731c693d592730862bffba42 227 SUPERFAMILY SSF55186 91 221 2.35E-18 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 ATC04_09850 caf026e5e6b6644f05917998a828c658 881 SUPERFAMILY SSF55486 234 473 1.47E-73 T 11-10-2018 ATC04_09850 caf026e5e6b6644f05917998a828c658 881 Gene3D G3DSA:1.10.390.60 225 466 6.1E-70 T 11-10-2018 ATC04_09850 caf026e5e6b6644f05917998a828c658 881 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 12 875 6.1E-259 T 11-10-2018 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2 ATC04_09850 caf026e5e6b6644f05917998a828c658 881 Gene3D G3DSA:2.60.40.1730 27 208 2.5E-25 T 11-10-2018 ATC04_09850 caf026e5e6b6644f05917998a828c658 881 Pfam PF11838 ERAP1-like C-terminal domain 546 869 2.6E-37 T 11-10-2018 IPR024571 ERAP1-like C-terminal domain ATC04_09850 caf026e5e6b6644f05917998a828c658 881 Pfam PF01433 Peptidase family M1 domain 243 461 7.5E-60 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATC04_09850 caf026e5e6b6644f05917998a828c658 881 SUPERFAMILY SSF63737 31 208 1.01E-31 T 11-10-2018 ATC04_09850 caf026e5e6b6644f05917998a828c658 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 279 289 1.1E-18 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATC04_09850 caf026e5e6b6644f05917998a828c658 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 332 344 1.1E-18 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATC04_09850 caf026e5e6b6644f05917998a828c658 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 143 158 1.1E-18 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATC04_09850 caf026e5e6b6644f05917998a828c658 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 191 206 1.1E-18 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATC04_09850 caf026e5e6b6644f05917998a828c658 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 328 1.1E-18 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATC04_13960 71815416789611b45b4468f043d4a021 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 331 1.5E-58 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_13960 71815416789611b45b4468f043d4a021 467 SUPERFAMILY SSF55424 347 465 2.06E-28 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 4.7E-33 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 318 4.7E-33 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 4.7E-33 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 4.7E-33 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 283 4.7E-33 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 Gene3D G3DSA:3.50.50.60 158 276 6.7E-99 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_13960 71815416789611b45b4468f043d4a021 467 Gene3D G3DSA:3.30.390.30 344 464 9.5E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_13960 71815416789611b45b4468f043d4a021 467 SUPERFAMILY SSF51905 10 341 5.33E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_13960 71815416789611b45b4468f043d4a021 467 Gene3D G3DSA:3.50.50.60 12 334 6.7E-99 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 5.0E-50 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 282 5.0E-50 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 5.0E-50 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 5.0E-50 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 5.0E-50 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 5.0E-50 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 347 368 5.0E-50 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 5.0E-50 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 318 5.0E-50 T 11-10-2018 ATC04_13960 71815416789611b45b4468f043d4a021 467 PIRSF PIRSF000350 1 466 6.6E-84 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ATC04_13960 71815416789611b45b4468f043d4a021 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 459 3.2E-24 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ATC04_03280 5b00fc4a9393850077720de626cad8e4 234 SMART SM00345 23 82 2.6E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03280 5b00fc4a9393850077720de626cad8e4 234 SUPERFAMILY SSF46785 13 86 2.62E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03280 5b00fc4a9393850077720de626cad8e4 234 Gene3D G3DSA:1.20.120.530 98 233 2.5E-33 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_03280 5b00fc4a9393850077720de626cad8e4 234 Gene3D G3DSA:1.10.10.10 10 82 5.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03280 5b00fc4a9393850077720de626cad8e4 234 Pfam PF07729 FCD domain 100 220 8.6E-28 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_03280 5b00fc4a9393850077720de626cad8e4 234 SUPERFAMILY SSF48008 99 227 2.88E-30 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_03280 5b00fc4a9393850077720de626cad8e4 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 82 1.1E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03280 5b00fc4a9393850077720de626cad8e4 234 SMART SM00895 100 221 3.6E-24 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_09255 97f0a15bf9b2d0338dc5423368718610 189 SUPERFAMILY SSF53271 13 180 1.97E-40 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ATC04_09255 97f0a15bf9b2d0338dc5423368718610 189 Gene3D G3DSA:3.40.50.2020 2 189 6.3E-57 T 11-10-2018 ATC04_09255 97f0a15bf9b2d0338dc5423368718610 189 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 10 187 34.385 T 11-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 ATC04_09255 97f0a15bf9b2d0338dc5423368718610 189 Pfam PF00156 Phosphoribosyl transferase domain 14 172 5.7E-22 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ATC04_14455 916c26aead63be165549447896efdfa7 401 SUPERFAMILY SSF55031 188 305 3.89E-22 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ATC04_14455 916c26aead63be165549447896efdfa7 401 Gene3D G3DSA:3.40.630.10 21 377 8.0E-111 T 11-10-2018 ATC04_14455 916c26aead63be165549447896efdfa7 401 SUPERFAMILY SSF53187 10 391 6.98E-71 T 11-10-2018 ATC04_14455 916c26aead63be165549447896efdfa7 401 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 380 4.9E-97 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ATC04_14455 916c26aead63be165549447896efdfa7 401 PIRSF PIRSF005962 7 395 3.8E-101 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ATC04_14455 916c26aead63be165549447896efdfa7 401 Pfam PF01546 Peptidase family M20/M25/M40 76 387 1.5E-28 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ATC04_14455 916c26aead63be165549447896efdfa7 401 Gene3D G3DSA:3.30.70.360 187 301 8.0E-111 T 11-10-2018 ATC04_14455 916c26aead63be165549447896efdfa7 401 Pfam PF07687 Peptidase dimerisation domain 191 289 3.2E-6 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ATC04_14195 9beba8afd7cb054a61472f296e1f779e 1111 SUPERFAMILY SSF53448 34 202 3.75E-22 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_14195 9beba8afd7cb054a61472f296e1f779e 1111 Pfam PF13641 Glycosyltransferase like family 2 6 176 1.5E-12 T 11-10-2018 ATC04_14195 9beba8afd7cb054a61472f296e1f779e 1111 Gene3D G3DSA:3.90.550.10 17 180 4.0E-20 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_12630 e7b83ec89c50506cbe8f159cb681b4be 522 Gene3D G3DSA:3.40.50.11060 111 234 1.1E-41 T 11-10-2018 ATC04_12630 e7b83ec89c50506cbe8f159cb681b4be 522 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 370 388 5.0E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_12630 e7b83ec89c50506cbe8f159cb681b4be 522 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 303 323 5.0E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_12630 e7b83ec89c50506cbe8f159cb681b4be 522 Hamap MF_00900 GTPase HflX [hflX]. 122 491 48.632 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 ATC04_12630 e7b83ec89c50506cbe8f159cb681b4be 522 SUPERFAMILY SSF52540 302 483 2.97E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12630 e7b83ec89c50506cbe8f159cb681b4be 522 PIRSF PIRSF006809 46 103 41.0 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 ATC04_12630 e7b83ec89c50506cbe8f159cb681b4be 522 PIRSF PIRSF006809 94 521 2.3E-154 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 ATC04_12630 e7b83ec89c50506cbe8f159cb681b4be 522 Gene3D G3DSA:3.40.50.300 300 464 4.7E-42 T 11-10-2018 ATC04_12630 e7b83ec89c50506cbe8f159cb681b4be 522 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 104 460 1.8E-133 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 ATC04_12630 e7b83ec89c50506cbe8f159cb681b4be 522 Pfam PF16360 GTP-binding GTPase Middle Region 209 295 4.1E-30 T 11-10-2018 IPR032305 GTP-binding protein, middle domain ATC04_12630 e7b83ec89c50506cbe8f159cb681b4be 522 Pfam PF01926 50S ribosome-binding GTPase 303 421 1.1E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_12630 e7b83ec89c50506cbe8f159cb681b4be 522 Pfam PF13167 GTP-binding GTPase N-terminal 119 207 1.4E-32 T 11-10-2018 IPR025121 GTPase HflX, N-terminal ATC04_00435 6a8362a34821efc06aca88d3fb216ffe 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.0E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00435 6a8362a34821efc06aca88d3fb216ffe 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.0E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00435 6a8362a34821efc06aca88d3fb216ffe 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 4.0E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00435 6a8362a34821efc06aca88d3fb216ffe 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 4.0E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00435 6a8362a34821efc06aca88d3fb216ffe 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 4.0E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00435 6a8362a34821efc06aca88d3fb216ffe 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 4.0E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00435 6a8362a34821efc06aca88d3fb216ffe 258 Gene3D G3DSA:3.40.50.720 2 257 1.7E-81 T 11-10-2018 ATC04_00435 6a8362a34821efc06aca88d3fb216ffe 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 9.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00435 6a8362a34821efc06aca88d3fb216ffe 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 9.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00435 6a8362a34821efc06aca88d3fb216ffe 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 9.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00435 6a8362a34821efc06aca88d3fb216ffe 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 247 1.5E-64 T 11-10-2018 ATC04_00435 6a8362a34821efc06aca88d3fb216ffe 258 SUPERFAMILY SSF51735 12 250 5.96E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_16015 e47906e49f721b4c5051610103562803 407 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 139 2.0E-20 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 ATC04_16015 e47906e49f721b4c5051610103562803 407 SUPERFAMILY SSF51735 1 177 6.4E-15 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_16015 e47906e49f721b4c5051610103562803 407 Gene3D G3DSA:3.40.50.720 4 392 1.5E-134 T 11-10-2018 ATC04_16015 e47906e49f721b4c5051610103562803 407 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 144 391 1.5E-17 T 11-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 ATC04_16015 e47906e49f721b4c5051610103562803 407 Gene3D G3DSA:3.30.360.10 154 354 1.5E-134 T 11-10-2018 ATC04_08420 c0a052ad596158dbd67a2901b35d996b 848 Pfam PF11838 ERAP1-like C-terminal domain 527 837 2.0E-50 T 11-10-2018 IPR024571 ERAP1-like C-terminal domain ATC04_08420 c0a052ad596158dbd67a2901b35d996b 848 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 5 843 0.0 T 11-10-2018 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2 ATC04_08420 c0a052ad596158dbd67a2901b35d996b 848 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 296 311 5.3E-20 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATC04_08420 c0a052ad596158dbd67a2901b35d996b 848 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 178 193 5.3E-20 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATC04_08420 c0a052ad596158dbd67a2901b35d996b 848 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 131 146 5.3E-20 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATC04_08420 c0a052ad596158dbd67a2901b35d996b 848 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 315 327 5.3E-20 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATC04_08420 c0a052ad596158dbd67a2901b35d996b 848 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 262 272 5.3E-20 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATC04_08420 c0a052ad596158dbd67a2901b35d996b 848 Gene3D G3DSA:1.10.390.60 202 472 2.8E-72 T 11-10-2018 ATC04_08420 c0a052ad596158dbd67a2901b35d996b 848 Gene3D G3DSA:2.60.40.1730 18 196 2.3E-26 T 11-10-2018 ATC04_08420 c0a052ad596158dbd67a2901b35d996b 848 Pfam PF01433 Peptidase family M1 domain 210 444 4.3E-61 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATC04_08420 c0a052ad596158dbd67a2901b35d996b 848 SUPERFAMILY SSF63737 5 195 1.57E-40 T 11-10-2018 ATC04_08420 c0a052ad596158dbd67a2901b35d996b 848 SUPERFAMILY SSF55486 207 454 6.59E-77 T 11-10-2018 ATC04_03565 32b1d1e66257d5886eb3df381f46203c 393 Gene3D G3DSA:3.40.50.10380 7 165 3.6E-65 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 ATC04_03565 32b1d1e66257d5886eb3df381f46203c 393 ProSitePatterns PS00331 Malic enzymes signature. 164 180 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 ATC04_03565 32b1d1e66257d5886eb3df381f46203c 393 Pfam PF00390 Malic enzyme, N-terminal domain 25 155 7.0E-26 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ATC04_03565 32b1d1e66257d5886eb3df381f46203c 393 SMART SM01274 23 156 1.4E-74 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ATC04_03565 32b1d1e66257d5886eb3df381f46203c 393 Gene3D G3DSA:3.40.50.720 166 393 4.6E-75 T 11-10-2018 ATC04_03565 32b1d1e66257d5886eb3df381f46203c 393 SUPERFAMILY SSF51735 168 391 2.43E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_03565 32b1d1e66257d5886eb3df381f46203c 393 SMART SM00919 168 388 1.4E-111 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ATC04_03565 32b1d1e66257d5886eb3df381f46203c 393 Pfam PF03949 Malic enzyme, NAD binding domain 170 386 2.8E-24 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ATC04_03565 32b1d1e66257d5886eb3df381f46203c 393 SUPERFAMILY SSF53223 17 166 3.74E-51 T 11-10-2018 ATC04_03565 32b1d1e66257d5886eb3df381f46203c 393 PIRSF PIRSF000106 9 392 2.1E-74 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 Gene3D G3DSA:3.30.2060.10 151 239 8.8E-57 T 11-10-2018 ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 Gene3D G3DSA:3.40.50.300 587 826 6.1E-227 T 11-10-2018 ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 Pfam PF00270 DEAD/DEAH box helicase 651 811 2.1E-18 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 SMART SM00982 1048 1148 4.9E-34 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 SMART SM00490 871 955 2.2E-19 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 SUPERFAMILY SSF52540 58 333 4.91E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 SMART SM01058 516 621 1.7E-44 T 11-10-2018 IPR003711 CarD-like/TRCF domain ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 51 1140 27.278 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 SUPERFAMILY SSF143517 1034 1152 1.96E-32 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 Pfam PF00271 Helicase conserved C-terminal domain 855 954 6.1E-15 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 SUPERFAMILY SSF52540 394 502 5.04E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 SUPERFAMILY SSF141259 508 591 6.93E-16 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 SUPERFAMILY SSF52540 571 828 3.4E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 Gene3D G3DSA:3.90.1150.50 1044 1158 6.2E-27 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 169 1121 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 SUPERFAMILY SSF52540 827 1035 3.47E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 SMART SM00487 645 835 1.6E-32 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 Gene3D G3DSA:3.40.50.11180 63 320 8.8E-57 T 11-10-2018 ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 Gene3D G3DSA:3.40.50.300 516 1034 6.1E-227 T 11-10-2018 ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 Pfam PF02559 CarD-like/TRCF domain 517 620 7.5E-28 T 11-10-2018 IPR003711 CarD-like/TRCF domain ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 Gene3D G3DSA:2.30.30.840 520 586 6.1E-227 T 11-10-2018 ATC04_13995 bdcc5176cd0956cb5bba72fdb447b7a5 1204 Pfam PF03461 TRCF domain 1049 1133 8.2E-26 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ATC04_09375 f0bf51e272168fe875d0064c7fdbf0f6 216 Gene3D G3DSA:1.10.150.320 138 216 3.3E-22 T 11-10-2018 ATC04_09375 f0bf51e272168fe875d0064c7fdbf0f6 216 Gene3D G3DSA:3.10.560.10 61 137 1.3E-8 T 11-10-2018 ATC04_09375 f0bf51e272168fe875d0064c7fdbf0f6 216 Pfam PF10531 SLBB domain 71 122 1.6E-12 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_09375 f0bf51e272168fe875d0064c7fdbf0f6 216 Pfam PF12836 Helix-hairpin-helix motif 153 212 2.2E-21 T 11-10-2018 ATC04_09375 f0bf51e272168fe875d0064c7fdbf0f6 216 SUPERFAMILY SSF47781 147 213 1.76E-26 T 11-10-2018 IPR010994 RuvA domain 2-like ATC04_09375 f0bf51e272168fe875d0064c7fdbf0f6 216 SMART SM00278 164 183 0.0079 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ATC04_09375 f0bf51e272168fe875d0064c7fdbf0f6 216 SMART SM00278 194 213 74.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ATC04_09375 f0bf51e272168fe875d0064c7fdbf0f6 216 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 152 211 3.0E-15 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain ATC04_01300 75525af723f18efdaf5aac69fbe1dd38 371 Gene3D G3DSA:3.10.310.10 4 367 1.5E-128 T 11-10-2018 ATC04_01300 75525af723f18efdaf5aac69fbe1dd38 371 SUPERFAMILY SSF54506 3 169 2.2E-52 T 11-10-2018 ATC04_01300 75525af723f18efdaf5aac69fbe1dd38 371 Pfam PF04303 PrpF protein 4 369 8.0E-102 T 11-10-2018 IPR007400 PrpF protein ATC04_01300 75525af723f18efdaf5aac69fbe1dd38 371 Gene3D G3DSA:3.10.310.10 168 354 1.5E-128 T 11-10-2018 ATC04_01300 75525af723f18efdaf5aac69fbe1dd38 371 SUPERFAMILY SSF54506 174 370 2.98E-56 T 11-10-2018 ATC04_02355 1117fba6defa366de53084030a182bb0 345 Gene3D G3DSA:1.20.140.10 189 335 4.1E-5 T 11-10-2018 ATC04_02355 1117fba6defa366de53084030a182bb0 345 Gene3D G3DSA:2.40.110.10 104 188 5.0E-5 T 11-10-2018 ATC04_02355 1117fba6defa366de53084030a182bb0 345 SUPERFAMILY SSF56645 55 182 9.16E-7 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_06955 e521a8b5c90037adfcbcdc7f8dab80eb 435 Pfam PF00202 Aminotransferase class-III 35 423 1.3E-72 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_06955 e521a8b5c90037adfcbcdc7f8dab80eb 435 SUPERFAMILY SSF53383 2 426 1.71E-107 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_06955 e521a8b5c90037adfcbcdc7f8dab80eb 435 Gene3D G3DSA:3.90.1150.10 7 422 7.7E-151 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_06955 e521a8b5c90037adfcbcdc7f8dab80eb 435 Gene3D G3DSA:3.40.640.10 69 320 7.7E-151 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_06955 e521a8b5c90037adfcbcdc7f8dab80eb 435 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 430 94.25 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ATC04_06955 e521a8b5c90037adfcbcdc7f8dab80eb 435 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 426 6.6E-166 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ATC04_06955 e521a8b5c90037adfcbcdc7f8dab80eb 435 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 274 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_04325 1f3804e87794b4cdff342813d8a24e64 460 Gene3D G3DSA:3.40.605.10 4 451 2.5E-143 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_04325 1f3804e87794b4cdff342813d8a24e64 460 Pfam PF00171 Aldehyde dehydrogenase family 5 452 7.4E-134 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_04325 1f3804e87794b4cdff342813d8a24e64 460 Gene3D G3DSA:3.40.309.10 238 428 2.5E-143 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_04325 1f3804e87794b4cdff342813d8a24e64 460 SUPERFAMILY SSF53720 4 458 1.96E-135 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_00995 42681b9a7f12386a291aa0744d9d745f 111 SUPERFAMILY SSF51182 23 91 1.08E-8 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ATC04_00995 42681b9a7f12386a291aa0744d9d745f 111 Gene3D G3DSA:2.60.120.10 5 110 4.2E-16 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 Gene3D G3DSA:3.40.50.800 565 671 1.9E-26 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 Gene3D G3DSA:3.30.930.10 240 564 1.4E-110 T 11-10-2018 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 SMART SM00863 177 234 1.8E-18 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 69 662 6.8E-191 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 Pfam PF03129 Anticodon binding domain 573 662 8.1E-18 T 11-10-2018 IPR004154 Anticodon-binding ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 Gene3D G3DSA:3.30.980.10 66 237 6.3E-55 T 11-10-2018 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 188 234 1.3E-12 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 352 561 9.7E-35 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 Gene3D G3DSA:3.30.54.20 127 201 6.3E-55 T 11-10-2018 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 SUPERFAMILY SSF55186 61 255 3.92E-53 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 SUPERFAMILY SSF55681 258 557 1.07E-85 T 11-10-2018 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 SUPERFAMILY SSF52954 561 670 7.7E-30 T 11-10-2018 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 539 552 3.8E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 566 578 3.8E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 391 414 3.8E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 496 524 3.8E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 358 386 3.8E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATC04_08995 c5a066678dc9b21e84790e5df9b6557e 671 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 63 666 32.147 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATC04_10175 21f39f152a2e686e81f03b6b9466f591 175 SUPERFAMILY SSF55729 1 148 4.43E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_10175 21f39f152a2e686e81f03b6b9466f591 175 Pfam PF00583 Acetyltransferase (GNAT) family 37 142 9.4E-10 T 11-10-2018 IPR000182 GNAT domain ATC04_10175 21f39f152a2e686e81f03b6b9466f591 175 Gene3D G3DSA:3.40.630.30 5 163 5.8E-30 T 11-10-2018 ATC04_12455 511adc82b714e06f184eb08a800db314 472 Gene3D G3DSA:1.10.275.10 32 237 1.4E-160 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal ATC04_12455 511adc82b714e06f184eb08a800db314 472 PRINTS PR00145 Argininosuccinate lyase family signature 318 337 1.1E-48 T 11-10-2018 ATC04_12455 511adc82b714e06f184eb08a800db314 472 PRINTS PR00145 Argininosuccinate lyase family signature 150 170 1.1E-48 T 11-10-2018 ATC04_12455 511adc82b714e06f184eb08a800db314 472 PRINTS PR00145 Argininosuccinate lyase family signature 283 299 1.1E-48 T 11-10-2018 ATC04_12455 511adc82b714e06f184eb08a800db314 472 PRINTS PR00145 Argininosuccinate lyase family signature 201 217 1.1E-48 T 11-10-2018 ATC04_12455 511adc82b714e06f184eb08a800db314 472 PRINTS PR00145 Argininosuccinate lyase family signature 239 263 1.1E-48 T 11-10-2018 ATC04_12455 511adc82b714e06f184eb08a800db314 472 PRINTS PR00145 Argininosuccinate lyase family signature 109 131 1.1E-48 T 11-10-2018 ATC04_12455 511adc82b714e06f184eb08a800db314 472 SUPERFAMILY SSF48557 13 465 1.13E-130 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 ATC04_12455 511adc82b714e06f184eb08a800db314 472 Gene3D G3DSA:1.20.200.10 127 456 1.4E-160 T 11-10-2018 ATC04_12455 511adc82b714e06f184eb08a800db314 472 Gene3D G3DSA:1.10.40.30 368 440 1.4E-160 T 11-10-2018 ATC04_12455 511adc82b714e06f184eb08a800db314 472 Pfam PF00206 Lyase 14 308 6.7E-58 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal ATC04_12455 511adc82b714e06f184eb08a800db314 472 Pfam PF14698 Argininosuccinate lyase C-terminal 371 438 5.8E-22 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATC04_12455 511adc82b714e06f184eb08a800db314 472 Hamap MF_00006 Argininosuccinate lyase [argH]. 9 461 38.697 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATC04_12455 511adc82b714e06f184eb08a800db314 472 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 1.4E-22 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_12455 511adc82b714e06f184eb08a800db314 472 PRINTS PR00149 Fumarate lyase superfamily signature 283 299 1.4E-22 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_12455 511adc82b714e06f184eb08a800db314 472 PRINTS PR00149 Fumarate lyase superfamily signature 110 128 1.4E-22 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_12455 511adc82b714e06f184eb08a800db314 472 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 1.4E-22 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_12455 511adc82b714e06f184eb08a800db314 472 ProSitePatterns PS00163 Fumarate lyases signature. 283 292 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ATC04_12455 511adc82b714e06f184eb08a800db314 472 TIGRFAM TIGR00838 argH: argininosuccinate lyase 10 463 4.0E-172 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATC04_09630 8321f3c7f9bb7f99ac9b24412f761a47 535 Gene3D G3DSA:3.10.310.70 77 178 2.6E-82 T 11-10-2018 ATC04_09630 8321f3c7f9bb7f99ac9b24412f761a47 535 Pfam PF07969 Amidohydrolase family 47 523 5.4E-65 T 11-10-2018 IPR013108 Amidohydrolase 3 ATC04_09630 8321f3c7f9bb7f99ac9b24412f761a47 535 SUPERFAMILY SSF51338 1 503 2.63E-10 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_09630 8321f3c7f9bb7f99ac9b24412f761a47 535 SUPERFAMILY SSF51556 58 458 3.78E-25 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_09630 8321f3c7f9bb7f99ac9b24412f761a47 535 Gene3D G3DSA:2.30.40.10 8 476 2.6E-82 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_09630 8321f3c7f9bb7f99ac9b24412f761a47 535 Gene3D G3DSA:3.20.20.140 59 462 2.6E-82 T 11-10-2018 ATC04_07870 b04f949d1d2e6663ce10657940bef9e5 415 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 6 201 7.9E-68 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATC04_07870 b04f949d1d2e6663ce10657940bef9e5 415 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 4 206 35.805 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATC04_07870 b04f949d1d2e6663ce10657940bef9e5 415 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 206 400 36.543 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ATC04_07870 b04f949d1d2e6663ce10657940bef9e5 415 Gene3D G3DSA:3.40.50.10990 207 375 1.0E-61 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ATC04_07870 b04f949d1d2e6663ce10657940bef9e5 415 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 11 200 7.0E-80 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATC04_07870 b04f949d1d2e6663ce10657940bef9e5 415 PIRSF PIRSF001259 4 408 1.9E-145 T 11-10-2018 ATC04_07870 b04f949d1d2e6663ce10657940bef9e5 415 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 214 398 1.2E-62 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ATC04_07870 b04f949d1d2e6663ce10657940bef9e5 415 Gene3D G3DSA:3.90.870.10 1 206 1.9E-85 T 11-10-2018 ATC04_07870 b04f949d1d2e6663ce10657940bef9e5 415 SUPERFAMILY SSF55821 5 204 2.75E-77 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ATC04_07870 b04f949d1d2e6663ce10657940bef9e5 415 SUPERFAMILY SSF142695 208 375 3.53E-50 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ATC04_07870 b04f949d1d2e6663ce10657940bef9e5 415 Pfam PF00925 GTP cyclohydrolase II 214 374 4.4E-57 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ATC04_09090 9ccd2e2fc27b09749edf76cf74b1f775 254 SUPERFAMILY SSF55729 140 241 1.36E-7 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_09090 9ccd2e2fc27b09749edf76cf74b1f775 254 Gene3D G3DSA:3.40.630.30 114 253 4.6E-8 T 11-10-2018 ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 SUPERFAMILY SSF51735 103 284 2.2E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 Gene3D G3DSA:3.30.70.260 456 530 4.0E-20 T 11-10-2018 ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 SUPERFAMILY SSF143548 323 451 1.8E-30 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 Gene3D G3DSA:3.40.50.720 100 281 3.1E-120 T 11-10-2018 ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 283 1.1E-62 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 8 519 7.1E-181 T 11-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 SUPERFAMILY SSF52283 5 137 7.37E-36 T 11-10-2018 ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 146 173 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 Gene3D G3DSA:3.40.50.720 9 307 3.1E-120 T 11-10-2018 ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 Gene3D G3DSA:3.30.1330.90 317 454 2.3E-39 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 SUPERFAMILY SSF55021 446 519 8.74E-14 T 11-10-2018 ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 315 5.6E-34 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ATC04_10810 5598d2bd7e9f711c8a4a50c075141eeb 532 Pfam PF01842 ACT domain 456 504 2.2E-7 T 11-10-2018 IPR002912 ACT domain ATC04_08075 baa03924e36500a9b165ca0a7772dd6d 431 Pfam PF00561 alpha/beta hydrolase fold 42 193 6.3E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_08075 baa03924e36500a9b165ca0a7772dd6d 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 132 146 1.8E-8 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATC04_08075 baa03924e36500a9b165ca0a7772dd6d 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 74 85 1.8E-8 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATC04_08075 baa03924e36500a9b165ca0a7772dd6d 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 44 52 1.8E-8 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATC04_08075 baa03924e36500a9b165ca0a7772dd6d 431 Gene3D G3DSA:3.40.50.1820 23 416 2.1E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_08075 baa03924e36500a9b165ca0a7772dd6d 431 SUPERFAMILY SSF53474 29 413 7.61E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_11040 53befc4dae3c23130ac6baeca4934467 172 SUPERFAMILY SSF55021 80 162 6.87E-22 T 11-10-2018 ATC04_11040 53befc4dae3c23130ac6baeca4934467 172 Pfam PF13710 ACT domain 13 74 1.6E-15 T 11-10-2018 ATC04_11040 53befc4dae3c23130ac6baeca4934467 172 Gene3D G3DSA:3.30.70.1150 84 163 4.2E-24 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal ATC04_11040 53befc4dae3c23130ac6baeca4934467 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 77 1.0E-31 T 11-10-2018 ATC04_11040 53befc4dae3c23130ac6baeca4934467 172 Pfam PF10369 Small subunit of acetolactate synthase 85 158 7.9E-23 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ATC04_11040 53befc4dae3c23130ac6baeca4934467 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 158 6.1E-55 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ATC04_11040 53befc4dae3c23130ac6baeca4934467 172 Gene3D G3DSA:3.30.70.260 1 78 7.8E-34 T 11-10-2018 ATC04_11040 53befc4dae3c23130ac6baeca4934467 172 SUPERFAMILY SSF55021 3 75 2.75E-21 T 11-10-2018 ATC04_16595 1ba20609c0f5cc8c6f3fd00e46e4e86b 107 Gene3D G3DSA:3.30.70.100 1 94 3.6E-22 T 11-10-2018 ATC04_16595 1ba20609c0f5cc8c6f3fd00e46e4e86b 107 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 9.1E-17 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ATC04_16595 1ba20609c0f5cc8c6f3fd00e46e4e86b 107 SUPERFAMILY SSF54909 1 92 1.47E-26 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 Gene3D G3DSA:1.20.140.10 220 342 4.0E-24 T 11-10-2018 ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 Gene3D G3DSA:1.20.140.10 591 735 3.0E-15 T 11-10-2018 ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 Gene3D G3DSA:1.10.540.10 364 475 6.8E-13 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 Gene3D G3DSA:1.10.540.10 3 118 1.0E-16 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 SUPERFAMILY SSF47203 223 337 3.38E-24 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 SUPERFAMILY SSF56645 2 209 1.3E-22 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 92 5.7E-11 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 373 476 2.7E-10 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 SUPERFAMILY SSF47203 586 734 6.11E-11 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 586 730 1.2E-9 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 224 335 8.9E-15 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 SUPERFAMILY SSF56645 401 599 1.96E-59 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 480 574 5.6E-20 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_02505 5b6836ccc2bc6648bec9874eaa29ba9d 735 Gene3D G3DSA:2.40.110.10 480 590 9.5E-34 T 11-10-2018 ATC04_04855 92c1788c659fcfbc64f55005f59cbef1 445 Gene3D G3DSA:1.20.1250.20 28 437 7.4E-27 T 11-10-2018 ATC04_04855 92c1788c659fcfbc64f55005f59cbef1 445 Pfam PF11700 Vacuole effluxer Atg22 like 154 438 5.3E-27 T 11-10-2018 IPR024671 Autophagy-related protein 22-like ATC04_04855 92c1788c659fcfbc64f55005f59cbef1 445 SUPERFAMILY SSF103473 25 439 1.44E-37 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_11835 0a3b2f7a4a63984d8cc67fffacc3b4f6 357 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 227 243 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ATC04_11835 0a3b2f7a4a63984d8cc67fffacc3b4f6 357 SMART SM00937 63 177 3.4E-57 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 ATC04_11835 0a3b2f7a4a63984d8cc67fffacc3b4f6 357 Pfam PF03462 PCRF domain 10 202 2.9E-69 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 ATC04_11835 0a3b2f7a4a63984d8cc67fffacc3b4f6 357 Gene3D G3DSA:3.30.160.20 209 296 9.5E-93 T 11-10-2018 ATC04_11835 0a3b2f7a4a63984d8cc67fffacc3b4f6 357 Gene3D G3DSA:3.30.70.1660 104 341 9.5E-93 T 11-10-2018 ATC04_11835 0a3b2f7a4a63984d8cc67fffacc3b4f6 357 SUPERFAMILY SSF75620 8 352 3.92E-129 T 11-10-2018 ATC04_11835 0a3b2f7a4a63984d8cc67fffacc3b4f6 357 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 355 1.4E-148 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ATC04_11835 0a3b2f7a4a63984d8cc67fffacc3b4f6 357 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 356 37.718 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ATC04_11835 0a3b2f7a4a63984d8cc67fffacc3b4f6 357 Gene3D G3DSA:1.20.58.410 4 95 8.5E-12 T 11-10-2018 ATC04_11835 0a3b2f7a4a63984d8cc67fffacc3b4f6 357 Pfam PF00472 RF-1 domain 213 320 2.5E-37 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ATC04_12730 2931785027f22d98bfd47d36567d0f4d 568 Hamap MF_01491 Ribonuclease J [rnj]. 20 568 40.456 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 ATC04_12730 2931785027f22d98bfd47d36567d0f4d 568 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 26 565 1.6E-154 T 11-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 ATC04_12730 2931785027f22d98bfd47d36567d0f4d 568 Pfam PF00753 Metallo-beta-lactamase superfamily 34 180 6.4E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_12730 2931785027f22d98bfd47d36567d0f4d 568 PIRSF PIRSF004803 16 568 4.2E-213 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 ATC04_12730 2931785027f22d98bfd47d36567d0f4d 568 SUPERFAMILY SSF56281 25 439 3.43E-92 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_12730 2931785027f22d98bfd47d36567d0f4d 568 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 370 422 9.2E-9 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain ATC04_12730 2931785027f22d98bfd47d36567d0f4d 568 SMART SM00849 37 231 6.9E-19 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_12730 2931785027f22d98bfd47d36567d0f4d 568 Gene3D G3DSA:3.10.20.580 465 568 2.1E-18 T 11-10-2018 ATC04_12730 2931785027f22d98bfd47d36567d0f4d 568 Gene3D G3DSA:3.40.50.10710 223 380 8.7E-179 T 11-10-2018 ATC04_12730 2931785027f22d98bfd47d36567d0f4d 568 Gene3D G3DSA:3.60.15.10 26 451 8.7E-179 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_06240 202d5061aae1b764e8f4c23a3af6915e 124 SUPERFAMILY SSF46946 2 121 3.4E-46 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ATC04_06240 202d5061aae1b764e8f4c23a3af6915e 124 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.7E-31 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06240 202d5061aae1b764e8f4c23a3af6915e 124 Gene3D G3DSA:1.10.8.50 1 72 5.3E-29 T 11-10-2018 ATC04_06240 202d5061aae1b764e8f4c23a3af6915e 124 Gene3D G3DSA:4.10.910.10 73 124 3.9E-24 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06240 202d5061aae1b764e8f4c23a3af6915e 124 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06240 202d5061aae1b764e8f4c23a3af6915e 124 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.8E-51 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06240 202d5061aae1b764e8f4c23a3af6915e 124 PIRSF PIRSF002134 1 124 9.9E-44 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06240 202d5061aae1b764e8f4c23a3af6915e 124 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.64 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_11375 30efdeb20e826b924745ddb3dbff839b 470 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 4.3E-6 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ATC04_11375 30efdeb20e826b924745ddb3dbff839b 470 PRINTS PR01005 Flagellar hook-associated protein signature 131 151 4.3E-6 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ATC04_11375 30efdeb20e826b924745ddb3dbff839b 470 PRINTS PR01005 Flagellar hook-associated protein signature 164 188 4.3E-6 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ATC04_11375 30efdeb20e826b924745ddb3dbff839b 470 SUPERFAMILY SSF64518 138 463 4.32E-12 T 11-10-2018 ATC04_11375 30efdeb20e826b924745ddb3dbff839b 470 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 414 463 3.5E-8 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ATC04_11375 30efdeb20e826b924745ddb3dbff839b 470 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 463 5.7E-77 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ATC04_11375 30efdeb20e826b924745ddb3dbff839b 470 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site ATC04_11375 30efdeb20e826b924745ddb3dbff839b 470 Pfam PF00460 Flagella basal body rod protein 7 37 3.1E-10 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ATC04_11330 5fe34b89a3b30bb6b436bf1d6562e9f8 101 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 6 101 14.018 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ATC04_11330 5fe34b89a3b30bb6b436bf1d6562e9f8 101 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 65 81 1.5E-6 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ATC04_11330 5fe34b89a3b30bb6b436bf1d6562e9f8 101 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 86 99 1.5E-6 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ATC04_11330 5fe34b89a3b30bb6b436bf1d6562e9f8 101 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 31 47 1.5E-6 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ATC04_11330 5fe34b89a3b30bb6b436bf1d6562e9f8 101 Pfam PF02049 Flagellar hook-basal body complex protein FliE 21 100 2.7E-20 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ATC04_11330 5fe34b89a3b30bb6b436bf1d6562e9f8 101 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 23 100 2.8E-13 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ATC04_00205 26d45c8300a456c802134658c07fdbba 288 Gene3D G3DSA:3.40.50.720 5 169 3.8E-32 T 11-10-2018 ATC04_00205 26d45c8300a456c802134658c07fdbba 288 SUPERFAMILY SSF51735 8 170 6.11E-25 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_00205 26d45c8300a456c802134658c07fdbba 288 Gene3D G3DSA:1.10.1040.20 171 270 2.3E-17 T 11-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily ATC04_00205 26d45c8300a456c802134658c07fdbba 288 Pfam PF10727 Rossmann-like domain 4 122 1.2E-40 T 11-10-2018 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain ATC04_00205 26d45c8300a456c802134658c07fdbba 288 SUPERFAMILY SSF48179 172 269 5.78E-23 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_00205 26d45c8300a456c802134658c07fdbba 288 Pfam PF10728 Domain of unknown function (DUF2520) 139 265 2.6E-39 T 11-10-2018 IPR018931 Domain of unknown function DUF2520 ATC04_06010 b894eeeb542b6933c47fc893366a8d2a 399 Pfam PF00155 Aminotransferase class I and II 32 390 3.9E-71 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATC04_06010 b894eeeb542b6933c47fc893366a8d2a 399 Gene3D G3DSA:3.90.1150.10 26 391 9.4E-132 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_06010 b894eeeb542b6933c47fc893366a8d2a 399 Gene3D G3DSA:3.40.640.10 64 286 9.4E-132 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_06010 b894eeeb542b6933c47fc893366a8d2a 399 SUPERFAMILY SSF53383 1 397 1.36E-111 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_06010 b894eeeb542b6933c47fc893366a8d2a 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 48 95 7.1E-7 T 11-10-2018 IPR004176 Clp, N-terminal ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 121 170 8.4E-8 T 11-10-2018 IPR004176 Clp, N-terminal ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 596 614 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 740 820 4.3E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 611 629 6.5E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 640 658 6.5E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 687 6.5E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 6.5E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 Gene3D G3DSA:1.10.8.60 376 506 1.6E-34 T 11-10-2018 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 SUPERFAMILY SSF81923 37 172 7.46E-19 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 SMART SM01086 740 829 2.1E-32 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 Gene3D G3DSA:1.10.1780.10 35 179 1.7E-23 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 233 365 5.9E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 325 337 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 Gene3D G3DSA:3.40.50.300 180 372 3.5E-64 T 11-10-2018 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 Gene3D G3DSA:4.10.860.10 438 492 1.6E-34 T 11-10-2018 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 Gene3D G3DSA:3.40.50.300 515 739 1.0E-82 T 11-10-2018 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 SUPERFAMILY SSF52540 511 825 1.59E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 SMART SM00382 228 373 2.4E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 SMART SM00382 562 741 2.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 Pfam PF07724 AAA domain (Cdc48 subfamily) 561 734 4.7E-51 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 Gene3D G3DSA:1.10.8.60 740 834 4.5E-27 T 11-10-2018 ATC04_16305 99228c8bfbf2438cb9eeebad02571201 851 SUPERFAMILY SSF52540 189 432 6.82E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03095 fbea0ccc7c7222a78be6eae5b55faa11 374 Gene3D G3DSA:3.30.565.10 250 368 3.2E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_03095 fbea0ccc7c7222a78be6eae5b55faa11 374 SUPERFAMILY SSF55874 281 367 3.41E-11 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_03095 fbea0ccc7c7222a78be6eae5b55faa11 374 Pfam PF07730 Histidine kinase 187 253 4.7E-14 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ATC04_16075 e0e13e856e837d30d279b832e22fbeb8 277 Gene3D G3DSA:2.60.130.10 40 275 1.2E-79 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ATC04_16075 e0e13e856e837d30d279b832e22fbeb8 277 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 115 143 - T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ATC04_16075 e0e13e856e837d30d279b832e22fbeb8 277 SUPERFAMILY SSF49482 51 272 3.01E-67 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ATC04_16075 e0e13e856e837d30d279b832e22fbeb8 277 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 54 272 5.1E-104 T 11-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 ATC04_16075 e0e13e856e837d30d279b832e22fbeb8 277 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 51 79 8.0E-11 T 11-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 ATC04_16075 e0e13e856e837d30d279b832e22fbeb8 277 Pfam PF00775 Dioxygenase 84 263 1.7E-55 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ATC04_06105 502a56276f85c8a35149ed129cac5edb 216 Gene3D G3DSA:2.40.30.10 134 216 7.9E-18 T 11-10-2018 ATC04_06105 502a56276f85c8a35149ed129cac5edb 216 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 7 213 40.158 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06105 502a56276f85c8a35149ed129cac5edb 216 Pfam PF00297 Ribosomal protein L3 100 189 4.1E-15 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06105 502a56276f85c8a35149ed129cac5edb 216 Gene3D G3DSA:2.40.50.620 38 101 3.8E-19 T 11-10-2018 ATC04_06105 502a56276f85c8a35149ed129cac5edb 216 ProSitePatterns PS00474 Ribosomal protein L3 signature. 107 130 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site ATC04_06105 502a56276f85c8a35149ed129cac5edb 216 SUPERFAMILY SSF50447 6 214 3.0E-82 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ATC04_06105 502a56276f85c8a35149ed129cac5edb 216 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 9 210 8.3E-90 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_07395 b794f3e7b6606de65f4fe25d8ec2bf05 1187 Gene3D G3DSA:3.20.20.140 1 301 7.9E-95 T 11-10-2018 ATC04_07395 b794f3e7b6606de65f4fe25d8ec2bf05 1187 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 8 1063 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07395 b794f3e7b6606de65f4fe25d8ec2bf05 1187 SUPERFAMILY SSF89550 8 294 6.77E-34 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ATC04_07395 b794f3e7b6606de65f4fe25d8ec2bf05 1187 SMART SM00481 9 76 2.3E-27 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal ATC04_07395 b794f3e7b6606de65f4fe25d8ec2bf05 1187 Pfam PF01336 OB-fold nucleic acid binding domain 1026 1102 1.3E-8 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ATC04_07395 b794f3e7b6606de65f4fe25d8ec2bf05 1187 Pfam PF14579 Helix-hairpin-helix motif 836 924 4.4E-26 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07395 b794f3e7b6606de65f4fe25d8ec2bf05 1187 Pfam PF02811 PHP domain 10 198 2.7E-43 T 11-10-2018 IPR004013 PHP domain GO:0003824 ATC04_07395 b794f3e7b6606de65f4fe25d8ec2bf05 1187 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 323 763 3.9E-162 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07395 b794f3e7b6606de65f4fe25d8ec2bf05 1187 Gene3D G3DSA:1.10.10.1600 456 542 1.0E-14 T 11-10-2018 ATC04_09350 309efc48fcecd1143054e7a0eb786db4 506 SUPERFAMILY SSF53067 257 500 5.67E-83 T 11-10-2018 ATC04_09350 309efc48fcecd1143054e7a0eb786db4 506 SUPERFAMILY SSF53067 4 256 1.2E-89 T 11-10-2018 ATC04_09350 309efc48fcecd1143054e7a0eb786db4 506 PIRSF PIRSF000538 3 505 6.6E-170 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ATC04_09350 309efc48fcecd1143054e7a0eb786db4 506 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 254 1.1E-79 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 ATC04_09350 309efc48fcecd1143054e7a0eb786db4 506 Gene3D G3DSA:3.30.420.40 3 255 3.5E-110 T 11-10-2018 ATC04_09350 309efc48fcecd1143054e7a0eb786db4 506 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 453 2.6E-66 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 ATC04_09350 309efc48fcecd1143054e7a0eb786db4 506 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 365 385 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ATC04_09350 309efc48fcecd1143054e7a0eb786db4 506 Gene3D G3DSA:3.30.420.40 257 506 7.9E-92 T 11-10-2018 ATC04_09350 309efc48fcecd1143054e7a0eb786db4 506 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 499 1.0E-224 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 ATC04_09350 309efc48fcecd1143054e7a0eb786db4 506 Hamap MF_00186 Glycerol kinase [glpK]. 3 500 55.554 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 ATC04_17385 fa7a7548ff0d8eaad2e908467de0b7f5 578 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 512 570 2.8E-5 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ATC04_17385 fa7a7548ff0d8eaad2e908467de0b7f5 578 SUPERFAMILY SSF63380 262 356 1.02E-13 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ATC04_17385 fa7a7548ff0d8eaad2e908467de0b7f5 578 Gene3D G3DSA:3.40.50.80 361 485 7.9E-14 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_17385 fa7a7548ff0d8eaad2e908467de0b7f5 578 Gene3D G3DSA:3.10.20.30 488 578 6.4E-12 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ATC04_17385 fa7a7548ff0d8eaad2e908467de0b7f5 578 SUPERFAMILY SSF54292 471 578 9.83E-16 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ATC04_17385 fa7a7548ff0d8eaad2e908467de0b7f5 578 PRINTS PR00409 Phthalate dioxygenase reductase family signature 366 385 2.7E-5 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_17385 fa7a7548ff0d8eaad2e908467de0b7f5 578 PRINTS PR00409 Phthalate dioxygenase reductase family signature 299 311 2.7E-5 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_17385 fa7a7548ff0d8eaad2e908467de0b7f5 578 PRINTS PR00409 Phthalate dioxygenase reductase family signature 447 455 2.7E-5 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_17385 fa7a7548ff0d8eaad2e908467de0b7f5 578 Pfam PF03473 MOSC domain 136 246 2.3E-10 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 ATC04_17385 fa7a7548ff0d8eaad2e908467de0b7f5 578 Gene3D G3DSA:2.40.33.20 116 281 3.4E-11 T 11-10-2018 ATC04_17385 fa7a7548ff0d8eaad2e908467de0b7f5 578 Pfam PF03476 MOSC N-terminal beta barrel domain 2 40 9.1E-5 T 11-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 ATC04_17385 fa7a7548ff0d8eaad2e908467de0b7f5 578 SUPERFAMILY SSF52343 364 480 5.5E-13 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_17385 fa7a7548ff0d8eaad2e908467de0b7f5 578 SUPERFAMILY SSF50800 2 247 4.87E-28 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily ATC04_13680 6c0cf8008d2cbec8609d5eed5809ffd0 350 Gene3D G3DSA:3.40.50.720 154 287 8.2E-93 T 11-10-2018 ATC04_13680 6c0cf8008d2cbec8609d5eed5809ffd0 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 133 1.1E-29 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATC04_13680 6c0cf8008d2cbec8609d5eed5809ffd0 350 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ATC04_13680 6c0cf8008d2cbec8609d5eed5809ffd0 350 SUPERFAMILY SSF50129 1 174 1.1E-45 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_13680 6c0cf8008d2cbec8609d5eed5809ffd0 350 Gene3D G3DSA:3.90.180.10 20 333 8.2E-93 T 11-10-2018 ATC04_13680 6c0cf8008d2cbec8609d5eed5809ffd0 350 SMART SM00829 8 343 0.0039 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATC04_13680 6c0cf8008d2cbec8609d5eed5809ffd0 350 SUPERFAMILY SSF51735 144 302 1.6E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_13680 6c0cf8008d2cbec8609d5eed5809ffd0 350 Pfam PF00107 Zinc-binding dehydrogenase 175 302 1.3E-23 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATC04_17125 4001f16b457803f2a3434561bf858ab2 521 SUPERFAMILY SSF54001 415 511 2.22E-29 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ATC04_17125 4001f16b457803f2a3434561bf858ab2 521 Pfam PF00877 NlpC/P60 family 416 508 7.5E-21 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ATC04_17125 4001f16b457803f2a3434561bf858ab2 521 Gene3D G3DSA:3.90.1720.10 334 520 8.5E-37 T 11-10-2018 ATC04_10645 c7ffe872581c2146af87189f54701087 322 Gene3D G3DSA:1.25.40.340 8 212 1.7E-14 T 11-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 ATC04_10645 c7ffe872581c2146af87189f54701087 322 SMART SM01120 38 210 3.8E-33 T 11-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 ATC04_10645 c7ffe872581c2146af87189f54701087 322 SUPERFAMILY SSF101473 11 211 3.79E-33 T 11-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 ATC04_10645 c7ffe872581c2146af87189f54701087 322 Pfam PF13684 Dihydroxyacetone kinase family 246 317 6.3E-8 T 11-10-2018 IPR033470 Uncharacterised protein, DhaK domain ATC04_10645 c7ffe872581c2146af87189f54701087 322 Pfam PF02734 DAK2 domain 38 209 1.1E-29 T 11-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 ATC04_03555 a0b04f8de30727159ae90af3a801b689 413 SUPERFAMILY SSF53383 15 405 1.28E-104 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_03555 a0b04f8de30727159ae90af3a801b689 413 Gene3D G3DSA:3.90.1150.10 32 403 1.4E-131 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_03555 a0b04f8de30727159ae90af3a801b689 413 Gene3D G3DSA:3.40.640.10 75 299 1.4E-131 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_03555 a0b04f8de30727159ae90af3a801b689 413 Pfam PF00155 Aminotransferase class I and II 48 400 1.9E-37 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATC04_15090 ae28b4bd06a374a39a25f6e512b07462 155 Pfam PF13279 Thioesterase-like superfamily 13 127 5.2E-10 T 11-10-2018 ATC04_15090 ae28b4bd06a374a39a25f6e512b07462 155 SUPERFAMILY SSF54637 8 147 2.69E-23 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_15090 ae28b4bd06a374a39a25f6e512b07462 155 Gene3D G3DSA:3.10.129.10 6 152 5.4E-31 T 11-10-2018 ATC04_13865 4f85dbb452cb4a105b6aa4e34a43839c 406 SUPERFAMILY SSF103473 12 391 7.32E-54 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_13865 4f85dbb452cb4a105b6aa4e34a43839c 406 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 386 2.5E-72 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 ATC04_13865 4f85dbb452cb4a105b6aa4e34a43839c 406 Pfam PF07690 Major Facilitator Superfamily 18 337 2.7E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_13865 4f85dbb452cb4a105b6aa4e34a43839c 406 Gene3D G3DSA:1.20.1720.10 15 393 3.4E-86 T 11-10-2018 ATC04_07710 0def749ba40b3adb5700b4e3372720ea 157 Pfam PF00355 Rieske [2Fe-2S] domain 75 140 2.6E-15 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATC04_07710 0def749ba40b3adb5700b4e3372720ea 157 SUPERFAMILY SSF50022 50 153 2.23E-26 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ATC04_07710 0def749ba40b3adb5700b4e3372720ea 157 PRINTS PR00162 Rieske 2Fe-2S subunit signature 112 124 3.3E-6 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ATC04_07710 0def749ba40b3adb5700b4e3372720ea 157 PRINTS PR00162 Rieske 2Fe-2S subunit signature 125 137 3.3E-6 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ATC04_07710 0def749ba40b3adb5700b4e3372720ea 157 PRINTS PR00162 Rieske 2Fe-2S subunit signature 91 102 3.3E-6 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ATC04_07710 0def749ba40b3adb5700b4e3372720ea 157 Gene3D G3DSA:2.102.10.10 58 155 8.4E-27 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 Gene3D G3DSA:3.40.30.20 421 628 5.3E-53 T 11-10-2018 IPR038220 Phenol hydroxylase, C-terminal TRX-fold domain superfamily ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 SUPERFAMILY SSF52833 447 632 2.91E-49 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 Gene3D G3DSA:3.50.50.60 34 402 3.0E-118 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 SUPERFAMILY SSF51905 32 415 6.48E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 198 213 9.9E-31 T 11-10-2018 ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 34 56 9.9E-31 T 11-10-2018 ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 372 390 9.9E-31 T 11-10-2018 ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 354 370 9.9E-31 T 11-10-2018 ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 390 406 9.9E-31 T 11-10-2018 ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 339 354 9.9E-31 T 11-10-2018 ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 Pfam PF07976 Phenol hydroxylase, C-terminal dimerisation domain 435 594 6.3E-34 T 11-10-2018 IPR012941 Phenol hydroxylase, C-terminal dimerisation domain ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 Gene3D G3DSA:3.30.9.50 102 319 3.0E-118 T 11-10-2018 ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 SUPERFAMILY SSF54373 222 322 8.24E-29 T 11-10-2018 ATC04_02860 88376f10fd73c76f1e33936a3c7d6b33 636 Pfam PF01494 FAD binding domain 32 405 3.3E-68 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 SUPERFAMILY SSF55620 12 135 2.37E-41 T 11-10-2018 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 Gene3D G3DSA:3.10.270.10 2 307 2.1E-115 T 11-10-2018 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 ProSitePatterns PS00366 Uricase signature. 154 181 - T 11-10-2018 IPR019842 Uricase, conserved site GO:0004846|GO:0006144|GO:0055114 KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 Pfam PF01014 Uricase 149 285 1.3E-31 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 Pfam PF01014 Uricase 19 135 8.6E-15 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 PRINTS PR00093 Uricase signature 95 108 1.2E-17 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 PRINTS PR00093 Uricase signature 170 182 1.2E-17 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 PRINTS PR00093 Uricase signature 21 32 1.2E-17 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 PRINTS PR00093 Uricase signature 154 170 1.2E-17 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 PRINTS PR00093 Uricase signature 60 74 1.2E-17 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 PIRSF PIRSF000241 2 297 9.8E-94 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 SUPERFAMILY SSF55620 147 301 6.23E-55 T 11-10-2018 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 ProDom PD003367 URICASE OXIDOREDUCTASE URATE OXIDASE METABOLISM PURINE PEROXISOME ACETYLATION II DIRECT 184 290 4.0E-33 T 11-10-2018 ATC04_01015 60a3f9deb82b67ff6159c084458520b6 307 TIGRFAM TIGR03383 urate_oxi: urate oxidase 15 290 1.1E-104 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ATC04_01595 1b8f5c2299a30a1b28da2be9f73d0afd 539 Gene3D G3DSA:3.40.190.10 214 515 1.6E-94 T 11-10-2018 ATC04_01595 1b8f5c2299a30a1b28da2be9f73d0afd 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 434 4.8E-70 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ATC04_01595 1b8f5c2299a30a1b28da2be9f73d0afd 539 Gene3D G3DSA:3.90.76.10 69 213 1.6E-94 T 11-10-2018 ATC04_01595 1b8f5c2299a30a1b28da2be9f73d0afd 539 PIRSF PIRSF002741 13 531 1.2E-74 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ATC04_01595 1b8f5c2299a30a1b28da2be9f73d0afd 539 Gene3D G3DSA:3.10.105.10 290 511 1.6E-94 T 11-10-2018 ATC04_01595 1b8f5c2299a30a1b28da2be9f73d0afd 539 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 106 128 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site ATC04_01595 1b8f5c2299a30a1b28da2be9f73d0afd 539 SUPERFAMILY SSF53850 65 535 2.17E-99 T 11-10-2018 ATC04_02630 27b9f7557f2af8dcf48b39dbcf5eef6f 324 SMART SM00893 4 186 0.0013 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_02630 27b9f7557f2af8dcf48b39dbcf5eef6f 324 Gene3D G3DSA:3.40.50.620 1 186 3.8E-16 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_02630 27b9f7557f2af8dcf48b39dbcf5eef6f 324 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 196 277 2.0E-35 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 ATC04_02630 27b9f7557f2af8dcf48b39dbcf5eef6f 324 SUPERFAMILY SSF52467 195 314 7.7E-47 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ATC04_02630 27b9f7557f2af8dcf48b39dbcf5eef6f 324 SUPERFAMILY SSF52402 3 169 6.63E-17 T 11-10-2018 ATC04_02630 27b9f7557f2af8dcf48b39dbcf5eef6f 324 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 259 285 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 ATC04_02630 27b9f7557f2af8dcf48b39dbcf5eef6f 324 PIRSF PIRSF000089 1 319 6.3E-84 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 ATC04_02630 27b9f7557f2af8dcf48b39dbcf5eef6f 324 Pfam PF01012 Electron transfer flavoprotein domain 5 178 7.7E-15 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_02630 27b9f7557f2af8dcf48b39dbcf5eef6f 324 Gene3D G3DSA:3.40.50.1220 190 322 2.3E-56 T 11-10-2018 ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 13 471 1.7E-163 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 Gene3D G3DSA:1.10.1750.10 376 477 6.8E-36 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 Pfam PF00308 Bacterial dnaA protein 137 354 9.3E-101 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 SUPERFAMILY SSF48295 368 473 3.66E-35 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 SUPERFAMILY SSF52540 137 348 3.04E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 Gene3D G3DSA:1.10.8.60 303 374 3.9E-28 T 11-10-2018 ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 SMART SM00382 169 300 4.9E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 10 472 32.556 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 SMART SM00760 381 450 5.1E-39 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 Gene3D G3DSA:3.40.50.300 126 301 6.7E-54 T 11-10-2018 ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 383 450 5.1E-30 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 ProSitePatterns PS01008 DnaA protein signature. 431 450 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 170 190 2.2E-52 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 268 295 2.2E-52 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 202 216 2.2E-52 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 431 450 2.2E-52 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ATC04_00650 c1daeabaf22844d5438a8d4498fecb24 478 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 234 248 2.2E-52 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ATC04_15650 a243cbe415e8ec92ec14f1d6c3b5ccac 280 PIRSF PIRSF000097 1 117 6.3E-37 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATC04_15650 a243cbe415e8ec92ec14f1d6c3b5ccac 280 PIRSF PIRSF000097 112 280 1.3E-45 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATC04_15650 a243cbe415e8ec92ec14f1d6c3b5ccac 280 PRINTS PR00069 Aldo-keto reductase signature 94 112 1.5E-45 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATC04_15650 a243cbe415e8ec92ec14f1d6c3b5ccac 280 PRINTS PR00069 Aldo-keto reductase signature 160 189 1.5E-45 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATC04_15650 a243cbe415e8ec92ec14f1d6c3b5ccac 280 PRINTS PR00069 Aldo-keto reductase signature 126 143 1.5E-45 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATC04_15650 a243cbe415e8ec92ec14f1d6c3b5ccac 280 PRINTS PR00069 Aldo-keto reductase signature 198 222 1.5E-45 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATC04_15650 a243cbe415e8ec92ec14f1d6c3b5ccac 280 PRINTS PR00069 Aldo-keto reductase signature 38 62 1.5E-45 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATC04_15650 a243cbe415e8ec92ec14f1d6c3b5ccac 280 Gene3D G3DSA:3.20.20.100 1 277 3.6E-110 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ATC04_15650 a243cbe415e8ec92ec14f1d6c3b5ccac 280 Pfam PF00248 Aldo/keto reductase family 19 262 2.6E-50 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain ATC04_15650 a243cbe415e8ec92ec14f1d6c3b5ccac 280 SUPERFAMILY SSF51430 9 266 6.15E-92 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ATC04_15650 a243cbe415e8ec92ec14f1d6c3b5ccac 280 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 126 143 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ATC04_15650 a243cbe415e8ec92ec14f1d6c3b5ccac 280 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 42 59 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ATC04_06270 cf71c5909ff8dc1259d88545747eda78 147 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 141 9.9E-59 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06270 cf71c5909ff8dc1259d88545747eda78 147 Gene3D G3DSA:3.90.1180.10 2 146 4.5E-59 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 ATC04_06270 cf71c5909ff8dc1259d88545747eda78 147 PIRSF PIRSF002181 1 147 3.2E-46 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ATC04_06270 cf71c5909ff8dc1259d88545747eda78 147 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.187 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ATC04_06270 cf71c5909ff8dc1259d88545747eda78 147 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 ATC04_06270 cf71c5909ff8dc1259d88545747eda78 147 SUPERFAMILY SSF52161 4 144 7.85E-57 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 ATC04_06270 cf71c5909ff8dc1259d88545747eda78 147 Pfam PF00572 Ribosomal protein L13 14 138 1.4E-54 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ATC04_07585 cda4d517a5e8f37137edebe574e3b661 152 SUPERFAMILY SSF51283 6 147 6.02E-50 T 11-10-2018 IPR036157 dUTPase-like superfamily ATC04_07585 cda4d517a5e8f37137edebe574e3b661 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 9 147 2.3E-52 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 ATC04_07585 cda4d517a5e8f37137edebe574e3b661 152 Gene3D G3DSA:2.70.40.10 1 150 1.4E-54 T 11-10-2018 IPR036157 dUTPase-like superfamily ATC04_07585 cda4d517a5e8f37137edebe574e3b661 152 Pfam PF00692 dUTPase 18 147 2.4E-34 T 11-10-2018 IPR029054 dUTPase-like ATC04_07585 cda4d517a5e8f37137edebe574e3b661 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 148 33.101 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 ATC04_06895 6b5fafc22f3a5ae841f8cc6fa4cede15 547 Gene3D G3DSA:3.40.50.300 248 417 1.0E-47 T 11-10-2018 ATC04_06895 6b5fafc22f3a5ae841f8cc6fa4cede15 547 Gene3D G3DSA:3.40.50.300 5 238 2.0E-69 T 11-10-2018 ATC04_06895 6b5fafc22f3a5ae841f8cc6fa4cede15 547 Pfam PF00271 Helicase conserved C-terminal domain 263 372 2.7E-29 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_06895 6b5fafc22f3a5ae841f8cc6fa4cede15 547 Pfam PF00270 DEAD/DEAH box helicase 49 221 4.5E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATC04_06895 6b5fafc22f3a5ae841f8cc6fa4cede15 547 SMART SM00487 44 253 6.3E-52 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_06895 6b5fafc22f3a5ae841f8cc6fa4cede15 547 SMART SM00490 291 372 7.1E-31 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_06895 6b5fafc22f3a5ae841f8cc6fa4cede15 547 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 182 190 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ATC04_06895 6b5fafc22f3a5ae841f8cc6fa4cede15 547 SUPERFAMILY SSF52540 104 389 7.2E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03405 4e1ed841dd97da9123dfe114665ac61e 328 Gene3D G3DSA:3.30.66.10 2 84 1.3E-21 T 11-10-2018 IPR035447 DNA topoisomerase I, N-terminal ATC04_03405 4e1ed841dd97da9123dfe114665ac61e 328 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 77 279 2.7E-27 T 11-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 ATC04_03405 4e1ed841dd97da9123dfe114665ac61e 328 SUPERFAMILY SSF55869 19 77 1.16E-11 T 11-10-2018 IPR035447 DNA topoisomerase I, N-terminal ATC04_03405 4e1ed841dd97da9123dfe114665ac61e 328 Gene3D G3DSA:1.10.132.120 85 321 2.7E-74 T 11-10-2018 ATC04_03405 4e1ed841dd97da9123dfe114665ac61e 328 Gene3D G3DSA:3.90.15.10 108 227 2.7E-74 T 11-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 ATC04_03405 4e1ed841dd97da9123dfe114665ac61e 328 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 76 85 4.1E-6 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 ATC04_03405 4e1ed841dd97da9123dfe114665ac61e 328 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 161 177 4.1E-6 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 ATC04_03405 4e1ed841dd97da9123dfe114665ac61e 328 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 276 287 4.1E-6 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 ATC04_03405 4e1ed841dd97da9123dfe114665ac61e 328 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 140 154 4.1E-6 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 ATC04_03405 4e1ed841dd97da9123dfe114665ac61e 328 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 226 240 4.1E-6 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 ATC04_03405 4e1ed841dd97da9123dfe114665ac61e 328 SUPERFAMILY SSF56349 73 296 1.24E-54 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATC04_07670 43cba9e73deaa70b92b714826c091652 655 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 6 628 3.1E-176 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATC04_07670 43cba9e73deaa70b92b714826c091652 655 SUPERFAMILY SSF52518 3 351 6.45E-62 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_07670 43cba9e73deaa70b92b714826c091652 655 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 4 287 3.6E-99 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATC04_07670 43cba9e73deaa70b92b714826c091652 655 Gene3D G3DSA:3.40.50.920 508 637 3.6E-24 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ATC04_07670 43cba9e73deaa70b92b714826c091652 655 Gene3D G3DSA:3.40.50.970 322 494 1.2E-54 T 11-10-2018 ATC04_07670 43cba9e73deaa70b92b714826c091652 655 SUPERFAMILY SSF52518 302 486 5.89E-50 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_07670 43cba9e73deaa70b92b714826c091652 655 ProSitePatterns PS00801 Transketolase signature 1. 29 48 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATC04_07670 43cba9e73deaa70b92b714826c091652 655 SMART SM00861 324 488 3.1E-48 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ATC04_07670 43cba9e73deaa70b92b714826c091652 655 Pfam PF02779 Transketolase, pyrimidine binding domain 324 487 2.1E-34 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ATC04_07670 43cba9e73deaa70b92b714826c091652 655 SUPERFAMILY SSF52922 511 626 2.09E-20 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ATC04_07670 43cba9e73deaa70b92b714826c091652 655 Pfam PF02780 Transketolase, C-terminal domain 508 623 2.0E-22 T 11-10-2018 IPR033248 Transketolase, C-terminal domain ATC04_07670 43cba9e73deaa70b92b714826c091652 655 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 3 632 38.682 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATC04_07670 43cba9e73deaa70b92b714826c091652 655 ProSitePatterns PS00802 Transketolase signature 2. 430 446 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATC04_02615 4595bf1d0baa1bfce43442d7d8f6b128 391 SUPERFAMILY SSF53901 271 382 4.39E-13 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_02615 4595bf1d0baa1bfce43442d7d8f6b128 391 PIRSF PIRSF000429 3 378 1.3E-17 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_02615 4595bf1d0baa1bfce43442d7d8f6b128 391 SUPERFAMILY SSF53901 4 234 4.12E-24 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_02615 4595bf1d0baa1bfce43442d7d8f6b128 391 Gene3D G3DSA:3.40.47.10 2 390 1.1E-94 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_09250 25665b9ce92596dba967ae2d6f204c78 136 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 4 128 1.5E-34 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 ATC04_09250 25665b9ce92596dba967ae2d6f204c78 136 Pfam PF01029 NusB family 6 128 8.8E-31 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ATC04_09250 25665b9ce92596dba967ae2d6f204c78 136 Gene3D G3DSA:1.10.940.10 1 128 8.8E-38 T 11-10-2018 IPR035926 NusB-like superfamily ATC04_09250 25665b9ce92596dba967ae2d6f204c78 136 SUPERFAMILY SSF48013 3 128 2.09E-32 T 11-10-2018 IPR035926 NusB-like superfamily ATC04_09250 25665b9ce92596dba967ae2d6f204c78 136 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 2 132 20.838 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 ATC04_08295 ed6936889a53e6df6e81b013f5f1b48f 261 SUPERFAMILY SSF46785 26 218 2.41E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_08295 ed6936889a53e6df6e81b013f5f1b48f 261 Gene3D G3DSA:1.10.10.10 22 137 6.1E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_08295 ed6936889a53e6df6e81b013f5f1b48f 261 Pfam PF12802 MarR family 30 73 6.8E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_10160 76e9c8aa92bf3a25337bf9dc8fd54523 194 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 8 169 8.7E-69 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ATC04_10160 76e9c8aa92bf3a25337bf9dc8fd54523 194 SUPERFAMILY SSF51161 3 169 2.71E-51 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ATC04_10160 76e9c8aa92bf3a25337bf9dc8fd54523 194 PIRSF PIRSF000441 1 189 4.1E-79 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ATC04_10160 76e9c8aa92bf3a25337bf9dc8fd54523 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 75 111 0.002 T 11-10-2018 IPR001451 Hexapeptide repeat ATC04_10160 76e9c8aa92bf3a25337bf9dc8fd54523 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 153 2.7E-7 T 11-10-2018 IPR001451 Hexapeptide repeat ATC04_10160 76e9c8aa92bf3a25337bf9dc8fd54523 194 Gene3D G3DSA:2.160.10.10 70 185 2.2E-34 T 11-10-2018 ATC04_10160 76e9c8aa92bf3a25337bf9dc8fd54523 194 Gene3D G3DSA:1.10.3130.10 2 69 3.3E-18 T 11-10-2018 ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 Gene3D G3DSA:3.40.50.720 1 251 6.4E-73 T 11-10-2018 ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 SUPERFAMILY SSF51735 5 251 3.62E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 247 2.9E-55 T 11-10-2018 ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.0E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.0E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.0E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_01320 b4e99cacb6780a045b58d91430ffca4b 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 201 0.0031 T 11-10-2018 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 SUPERFAMILY SSF53328 85 280 5.63E-59 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 Gene3D G3DSA:3.40.50.170 84 280 4.3E-69 T 11-10-2018 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 Pfam PF00551 Formyl transferase 85 261 1.5E-35 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 SUPERFAMILY SSF55021 2 80 1.17E-15 T 11-10-2018 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 Pfam PF01842 ACT domain 4 65 7.3E-8 T 11-10-2018 IPR002912 ACT domain ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 PIRSF PIRSF036480 1 280 6.7E-105 T 11-10-2018 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 279 1.7E-91 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 279 43.475 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 1.5E-42 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 107 134 1.5E-42 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 253 278 1.5E-42 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 231 253 1.5E-42 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 1.5E-42 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 85 107 1.5E-42 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_14610 ce9ace6b668d385df54e8e9167d3a63b 280 Gene3D G3DSA:3.30.70.260 1 83 1.0E-23 T 11-10-2018 ATC04_12350 b213b636df7856816f5225d4c6fe89fb 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 10 379 3.3E-134 T 11-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 ATC04_12350 b213b636df7856816f5225d4c6fe89fb 380 PRINTS PR00143 Citrate synthase signature 178 193 6.2E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_12350 b213b636df7856816f5225d4c6fe89fb 380 PRINTS PR00143 Citrate synthase signature 129 142 6.2E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_12350 b213b636df7856816f5225d4c6fe89fb 380 PRINTS PR00143 Citrate synthase signature 339 353 6.2E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_12350 b213b636df7856816f5225d4c6fe89fb 380 PRINTS PR00143 Citrate synthase signature 262 282 6.2E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_12350 b213b636df7856816f5225d4c6fe89fb 380 PRINTS PR00143 Citrate synthase signature 200 228 6.2E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_12350 b213b636df7856816f5225d4c6fe89fb 380 PRINTS PR00143 Citrate synthase signature 319 335 6.2E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_12350 b213b636df7856816f5225d4c6fe89fb 380 SUPERFAMILY SSF48256 8 378 1.57E-121 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 ATC04_12350 b213b636df7856816f5225d4c6fe89fb 380 Gene3D G3DSA:1.10.580.10 31 359 2.9E-128 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ATC04_12350 b213b636df7856816f5225d4c6fe89fb 380 ProSitePatterns PS00480 Citrate synthase signature. 269 281 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ATC04_12350 b213b636df7856816f5225d4c6fe89fb 380 PIRSF PIRSF001369 2 380 1.4E-114 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type ATC04_12350 b213b636df7856816f5225d4c6fe89fb 380 Pfam PF00285 Citrate synthase, C-terminal domain 11 368 2.3E-115 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_12350 b213b636df7856816f5225d4c6fe89fb 380 Gene3D G3DSA:1.10.230.10 226 333 2.9E-128 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain ATC04_14010 a5fed255b37e53eedf4de87ef3f17f9a 148 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 4 143 4.0E-39 T 11-10-2018 ATC04_14010 a5fed255b37e53eedf4de87ef3f17f9a 148 Pfam PF01592 NifU-like N terminal domain 8 132 2.2E-14 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 ATC04_14010 a5fed255b37e53eedf4de87ef3f17f9a 148 SUPERFAMILY SSF82649 2 144 9.16E-36 T 11-10-2018 ATC04_14010 a5fed255b37e53eedf4de87ef3f17f9a 148 Gene3D G3DSA:3.90.1010.10 1 145 3.1E-41 T 11-10-2018 ATC04_01810 b5dccbb0788dabd3dc58eb0291f75f19 346 Gene3D G3DSA:1.10.10.2840 205 319 4.3E-8 T 11-10-2018 ATC04_01810 b5dccbb0788dabd3dc58eb0291f75f19 346 Pfam PF05651 Putative sugar diacid recognition 2 125 6.4E-31 T 11-10-2018 IPR008599 Putative sugar diacid recognition ATC04_01810 b5dccbb0788dabd3dc58eb0291f75f19 346 Pfam PF13556 PucR C-terminal helix-turn-helix domain 266 311 1.7E-9 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ATC04_07260 d4a3e6f05f797c084e6f1cc4f5e37e10 415 Gene3D G3DSA:3.40.50.300 135 397 2.9E-35 T 11-10-2018 ATC04_07260 d4a3e6f05f797c084e6f1cc4f5e37e10 415 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 145 367 3.4E-6 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ATC04_07260 d4a3e6f05f797c084e6f1cc4f5e37e10 415 SUPERFAMILY SSF52540 137 396 9.43E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15840 4ae4eeaa960878887e37dae50f2e4393 174 SUPERFAMILY SSF53254 6 155 1.06E-23 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_15840 4ae4eeaa960878887e37dae50f2e4393 174 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 79 1.0E-6 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_15840 4ae4eeaa960878887e37dae50f2e4393 174 SMART SM00855 8 121 3.5E-5 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_15840 4ae4eeaa960878887e37dae50f2e4393 174 Gene3D G3DSA:3.40.50.1240 1 173 1.5E-38 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_11640 9923f3f8f58f61d6dd2c6107f838dc53 244 Gene3D G3DSA:3.30.230.70 11 242 3.8E-58 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATC04_11640 9923f3f8f58f61d6dd2c6107f838dc53 244 ProSitePatterns PS01277 Ribonuclease PH signature. 118 131 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site ATC04_11640 9923f3f8f58f61d6dd2c6107f838dc53 244 SUPERFAMILY SSF55666 160 241 1.57E-22 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATC04_11640 9923f3f8f58f61d6dd2c6107f838dc53 244 Hamap MF_00564 Ribonuclease PH [rph]. 13 241 43.059 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 ATC04_11640 9923f3f8f58f61d6dd2c6107f838dc53 244 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 4 240 9.6E-111 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 ATC04_11640 9923f3f8f58f61d6dd2c6107f838dc53 244 SUPERFAMILY SSF54211 3 184 4.96E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_11640 9923f3f8f58f61d6dd2c6107f838dc53 244 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 1.0E-23 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATC04_11640 9923f3f8f58f61d6dd2c6107f838dc53 244 Pfam PF03725 3' exoribonuclease family, domain 2 162 226 6.6E-11 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATC04_17935 1c8e3160f3bc4c716cd8b7b4f8507ccc 192 Gene3D G3DSA:1.10.1740.10 16 98 2.9E-29 T 11-10-2018 ATC04_17935 1c8e3160f3bc4c716cd8b7b4f8507ccc 192 Pfam PF04542 Sigma-70 region 2 34 100 3.7E-14 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_17935 1c8e3160f3bc4c716cd8b7b4f8507ccc 192 Gene3D G3DSA:1.10.10.10 102 192 1.2E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_17935 1c8e3160f3bc4c716cd8b7b4f8507ccc 192 SUPERFAMILY SSF88659 132 189 2.05E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ATC04_17935 1c8e3160f3bc4c716cd8b7b4f8507ccc 192 SUPERFAMILY SSF88946 14 112 1.45E-21 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_17935 1c8e3160f3bc4c716cd8b7b4f8507ccc 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 187 2.0E-24 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ATC04_17935 1c8e3160f3bc4c716cd8b7b4f8507ccc 192 Pfam PF04545 Sigma-70, region 4 138 187 4.3E-13 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ATC04_16285 cb1f0dd7acad644922de2f12893650a1 206 SUPERFAMILY SSF55469 22 197 4.45E-39 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ATC04_16285 cb1f0dd7acad644922de2f12893650a1 206 Pfam PF00881 Nitroreductase family 28 184 6.0E-16 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ATC04_16285 cb1f0dd7acad644922de2f12893650a1 206 Gene3D G3DSA:3.40.109.10 15 203 7.7E-29 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ATC04_04725 aae2acbd7b25d1671aa895fe1d94d6eb 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 2.8E-23 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_04725 aae2acbd7b25d1671aa895fe1d94d6eb 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 24 43 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_04725 aae2acbd7b25d1671aa895fe1d94d6eb 56 Pfam PF00471 Ribosomal protein L33 11 56 2.6E-17 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_04725 aae2acbd7b25d1671aa895fe1d94d6eb 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 8 56 14.326 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_04725 aae2acbd7b25d1671aa895fe1d94d6eb 56 Gene3D G3DSA:2.20.28.120 1 56 3.3E-25 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_04725 aae2acbd7b25d1671aa895fe1d94d6eb 56 SUPERFAMILY SSF57829 4 56 2.93E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 ATC04_17345 24a81016c77a433215e965eb43c0c115 507 Pfam PF00171 Aldehyde dehydrogenase family 28 494 7.2E-162 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_17345 24a81016c77a433215e965eb43c0c115 507 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 262 269 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ATC04_17345 24a81016c77a433215e965eb43c0c115 507 Gene3D G3DSA:3.40.605.10 24 493 3.1E-160 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_17345 24a81016c77a433215e965eb43c0c115 507 SUPERFAMILY SSF53720 15 499 3.27E-160 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_17345 24a81016c77a433215e965eb43c0c115 507 Gene3D G3DSA:3.40.309.10 267 465 3.1E-160 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_17345 24a81016c77a433215e965eb43c0c115 507 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ATC04_05955 318e8bac770aaee9011dd4621f7c0efa 318 TIGRFAM TIGR03448 mycothiol_MshD: mycothiol synthase 17 312 5.4E-90 T 11-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 ATC04_05955 318e8bac770aaee9011dd4621f7c0efa 318 PIRSF PIRSF021524 6 317 4.4E-105 T 11-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 ATC04_05955 318e8bac770aaee9011dd4621f7c0efa 318 Pfam PF00583 Acetyltransferase (GNAT) family 207 303 1.1E-11 T 11-10-2018 IPR000182 GNAT domain ATC04_05955 318e8bac770aaee9011dd4621f7c0efa 318 Pfam PF00583 Acetyltransferase (GNAT) family 76 116 1.1E-4 T 11-10-2018 IPR000182 GNAT domain ATC04_05955 318e8bac770aaee9011dd4621f7c0efa 318 Gene3D G3DSA:3.40.630.30 8 317 1.0E-84 T 11-10-2018 ATC04_05955 318e8bac770aaee9011dd4621f7c0efa 318 SUPERFAMILY SSF55729 18 307 4.19E-45 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_05955 318e8bac770aaee9011dd4621f7c0efa 318 Hamap MF_01698 Mycothiol acetyltransferase [mshD]. 12 314 32.927 T 11-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 ATC04_01190 be60580a5e34a1e1f6771d7d34f4e92e 418 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 179 268 6.5E-6 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ATC04_01190 be60580a5e34a1e1f6771d7d34f4e92e 418 Gene3D G3DSA:3.20.20.60 169 310 7.0E-12 T 11-10-2018 ATC04_01190 be60580a5e34a1e1f6771d7d34f4e92e 418 SUPERFAMILY SSF51621 89 308 1.36E-12 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ATC04_08755 a85247ae230122448d1b38e1d7d05ebb 166 Pfam PF13404 AsnC-type helix-turn-helix domain 3 44 1.3E-6 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_08755 a85247ae230122448d1b38e1d7d05ebb 166 Pfam PF01037 Lrp/AsnC ligand binding domain 78 140 5.3E-15 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATC04_08755 a85247ae230122448d1b38e1d7d05ebb 166 SMART SM00344 3 111 1.3E-17 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATC04_08755 a85247ae230122448d1b38e1d7d05ebb 166 Gene3D G3DSA:1.10.10.10 1 53 4.0E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_08755 a85247ae230122448d1b38e1d7d05ebb 166 SUPERFAMILY SSF54909 63 150 4.42E-15 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_08755 a85247ae230122448d1b38e1d7d05ebb 166 Gene3D G3DSA:3.30.70.920 56 137 2.4E-17 T 11-10-2018 ATC04_08755 a85247ae230122448d1b38e1d7d05ebb 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.6E-7 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_08755 a85247ae230122448d1b38e1d7d05ebb 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.6E-7 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_08755 a85247ae230122448d1b38e1d7d05ebb 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.6E-7 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_08755 a85247ae230122448d1b38e1d7d05ebb 166 SUPERFAMILY SSF46785 2 63 4.09E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_16730 5ec92ba55d197091f72f196f834edf2a 165 Gene3D G3DSA:1.10.1740.10 2 70 1.2E-14 T 11-10-2018 ATC04_16730 5ec92ba55d197091f72f196f834edf2a 165 SUPERFAMILY SSF88946 5 80 6.67E-14 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_16730 5ec92ba55d197091f72f196f834edf2a 165 SUPERFAMILY SSF88659 72 157 1.2E-10 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ATC04_16730 5ec92ba55d197091f72f196f834edf2a 165 Gene3D G3DSA:1.10.10.10 97 158 2.1E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16730 5ec92ba55d197091f72f196f834edf2a 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 152 1.5E-17 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ATC04_16730 5ec92ba55d197091f72f196f834edf2a 165 Pfam PF08281 Sigma-70, region 4 100 144 1.0E-8 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATC04_16730 5ec92ba55d197091f72f196f834edf2a 165 Pfam PF04542 Sigma-70 region 2 9 72 2.3E-11 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_11500 4d003543647b42bb341c816286d8d03e 158 SUPERFAMILY SSF109604 12 149 2.09E-24 T 11-10-2018 ATC04_11500 4d003543647b42bb341c816286d8d03e 158 Pfam PF13328 HD domain 17 76 3.0E-9 T 11-10-2018 IPR003607 HD/PDEase domain ATC04_11500 4d003543647b42bb341c816286d8d03e 158 Gene3D G3DSA:1.10.3210.10 2 156 1.3E-21 T 11-10-2018 ATC04_11500 4d003543647b42bb341c816286d8d03e 158 SMART SM00471 32 134 4.9E-6 T 11-10-2018 IPR003607 HD/PDEase domain ATC04_12095 d5e8be9645e9d9eb4a3b8ec78af8c3bb 142 Pfam PF12728 Helix-turn-helix domain 89 131 8.6E-9 T 11-10-2018 ATC04_12095 d5e8be9645e9d9eb4a3b8ec78af8c3bb 142 SUPERFAMILY SSF46955 89 136 2.84E-7 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_12095 d5e8be9645e9d9eb4a3b8ec78af8c3bb 142 Gene3D G3DSA:1.10.1660.10 86 139 1.9E-9 T 11-10-2018 ATC04_13595 cacf834855f2337716985b36f4e70270 283 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 280 6.9E-82 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ATC04_13595 cacf834855f2337716985b36f4e70270 283 PIRSF PIRSF001359 1 281 2.9E-74 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ATC04_13595 cacf834855f2337716985b36f4e70270 283 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 280 3.7E-70 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ATC04_13595 cacf834855f2337716985b36f4e70270 283 Gene3D G3DSA:3.20.20.70 1 283 5.7E-91 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_13595 cacf834855f2337716985b36f4e70270 283 SUPERFAMILY SSF51569 2 280 5.86E-83 T 11-10-2018 ATC04_06230 6054bfa22cb931f80d09672b5b404cfd 277 SUPERFAMILY SSF55920 10 258 1.7E-68 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like ATC04_06230 6054bfa22cb931f80d09672b5b404cfd 277 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 175 193 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_06230 6054bfa22cb931f80d09672b5b404cfd 277 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 8 257 1.6E-76 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_06230 6054bfa22cb931f80d09672b5b404cfd 277 Pfam PF00557 Metallopeptidase family M24 18 248 2.2E-46 T 11-10-2018 IPR000994 Peptidase M24 ATC04_06230 6054bfa22cb931f80d09672b5b404cfd 277 Hamap MF_01974 Methionine aminopeptidase [map]. 8 258 34.108 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_06230 6054bfa22cb931f80d09672b5b404cfd 277 PRINTS PR00599 Methionine aminopeptidase-1 signature 169 181 1.6E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_06230 6054bfa22cb931f80d09672b5b404cfd 277 PRINTS PR00599 Methionine aminopeptidase-1 signature 200 212 1.6E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_06230 6054bfa22cb931f80d09672b5b404cfd 277 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 1.6E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_06230 6054bfa22cb931f80d09672b5b404cfd 277 PRINTS PR00599 Methionine aminopeptidase-1 signature 73 86 1.6E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_06230 6054bfa22cb931f80d09672b5b404cfd 277 Gene3D G3DSA:3.90.230.10 2 263 2.1E-84 T 11-10-2018 ATC04_00425 3419dee8ebd29e0974a791bb057ed718 556 SUPERFAMILY SSF51905 12 541 1.62E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00425 3419dee8ebd29e0974a791bb057ed718 556 Pfam PF00890 FAD binding domain 16 525 1.2E-78 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_00425 3419dee8ebd29e0974a791bb057ed718 556 Gene3D G3DSA:3.50.50.60 15 536 9.7E-158 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00425 3419dee8ebd29e0974a791bb057ed718 556 SUPERFAMILY SSF56425 320 484 1.6E-34 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_00425 3419dee8ebd29e0974a791bb057ed718 556 Gene3D G3DSA:3.90.700.10 328 473 9.7E-158 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_07070 12a3ddc533f29216ae8bd974f3dca097 515 SUPERFAMILY SSF50156 397 507 2.76E-22 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 ATC04_07070 12a3ddc533f29216ae8bd974f3dca097 515 Gene3D G3DSA:2.40.10.10 264 412 2.4E-40 T 11-10-2018 ATC04_07070 12a3ddc533f29216ae8bd974f3dca097 515 Gene3D G3DSA:2.30.42.10 413 514 2.3E-20 T 11-10-2018 ATC04_07070 12a3ddc533f29216ae8bd974f3dca097 515 PRINTS PR00834 HtrA/DegQ protease family signature 458 470 1.2E-34 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATC04_07070 12a3ddc533f29216ae8bd974f3dca097 515 PRINTS PR00834 HtrA/DegQ protease family signature 208 220 1.2E-34 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATC04_07070 12a3ddc533f29216ae8bd974f3dca097 515 PRINTS PR00834 HtrA/DegQ protease family signature 366 383 1.2E-34 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATC04_07070 12a3ddc533f29216ae8bd974f3dca097 515 PRINTS PR00834 HtrA/DegQ protease family signature 344 361 1.2E-34 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATC04_07070 12a3ddc533f29216ae8bd974f3dca097 515 PRINTS PR00834 HtrA/DegQ protease family signature 234 254 1.2E-34 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATC04_07070 12a3ddc533f29216ae8bd974f3dca097 515 Pfam PF13365 Trypsin-like peptidase domain 199 373 1.3E-29 T 11-10-2018 ATC04_07070 12a3ddc533f29216ae8bd974f3dca097 515 SUPERFAMILY SSF50494 174 411 1.96E-52 T 11-10-2018 IPR009003 Peptidase S1, PA clan ATC04_07070 12a3ddc533f29216ae8bd974f3dca097 515 SMART SM00228 416 500 2.6E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ATC04_07070 12a3ddc533f29216ae8bd974f3dca097 515 Pfam PF13180 PDZ domain 418 508 4.6E-16 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ATC04_07070 12a3ddc533f29216ae8bd974f3dca097 515 Gene3D G3DSA:2.40.10.10 167 263 8.9E-28 T 11-10-2018 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 Pfam PF07724 AAA domain (Cdc48 subfamily) 599 761 5.2E-53 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 SUPERFAMILY SSF52540 158 548 7.12E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 Gene3D G3DSA:3.40.50.300 343 547 2.6E-69 T 11-10-2018 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 Gene3D G3DSA:3.40.50.300 553 766 6.6E-84 T 11-10-2018 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 SUPERFAMILY SSF81923 4 155 2.26E-34 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 5 853 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 SUPERFAMILY SSF52540 549 852 1.42E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 SMART SM01086 767 858 3.0E-35 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 Gene3D G3DSA:3.40.50.300 149 342 5.3E-73 T 11-10-2018 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 20 60 2.5E-10 T 11-10-2018 IPR004176 Clp, N-terminal ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 144 4.1E-9 T 11-10-2018 IPR004176 Clp, N-terminal ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 Gene3D G3DSA:1.10.8.60 767 863 4.2E-31 T 11-10-2018 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 SMART SM00382 600 768 1.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 SMART SM00382 198 343 8.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 8.1E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 8.1E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 8.1E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 8.1E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 333 3.7E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 847 3.4E-26 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ATC04_05005 8fbfd18f5fbdbeef00086b1f5e345b64 863 Gene3D G3DSA:1.10.1780.10 3 148 2.3E-30 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ATC04_15280 b521190363e4d20fcdefe8c21174ed01 204 Pfam PF11228 Protein of unknown function (DUF3027) 32 197 6.5E-24 T 11-10-2018 IPR021391 Protein of unknown function DUF3027 ATC04_04015 b37f8c7f06ef35cdc86f2523824dda1b 394 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 132 143 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site ATC04_04015 b37f8c7f06ef35cdc86f2523824dda1b 394 PRINTS PR00723 Subtilisin serine protease family (S8) signature 164 177 9.5E-22 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ATC04_04015 b37f8c7f06ef35cdc86f2523824dda1b 394 PRINTS PR00723 Subtilisin serine protease family (S8) signature 334 350 9.5E-22 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ATC04_04015 b37f8c7f06ef35cdc86f2523824dda1b 394 PRINTS PR00723 Subtilisin serine protease family (S8) signature 127 146 9.5E-22 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ATC04_04015 b37f8c7f06ef35cdc86f2523824dda1b 394 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 335 345 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site ATC04_04015 b37f8c7f06ef35cdc86f2523824dda1b 394 SUPERFAMILY SSF52743 115 383 5.37E-68 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ATC04_04015 b37f8c7f06ef35cdc86f2523824dda1b 394 Pfam PF00082 Subtilase family 127 372 6.3E-42 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATC04_04015 b37f8c7f06ef35cdc86f2523824dda1b 394 Gene3D G3DSA:3.40.50.200 94 387 6.2E-74 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ATC04_01390 e63514ecc89e5e80a0e169eceaed3ba9 607 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 297 4.7E-27 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ATC04_01390 e63514ecc89e5e80a0e169eceaed3ba9 607 SMART SM00382 372 571 4.8E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_01390 e63514ecc89e5e80a0e169eceaed3ba9 607 SUPERFAMILY SSF52540 348 593 9.32E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_01390 e63514ecc89e5e80a0e169eceaed3ba9 607 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 573 594 6.0E-6 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ATC04_01390 e63514ecc89e5e80a0e169eceaed3ba9 607 Pfam PF00005 ABC transporter 363 522 2.7E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_01390 e63514ecc89e5e80a0e169eceaed3ba9 607 Gene3D G3DSA:3.40.50.300 345 596 2.5E-57 T 11-10-2018 ATC04_15225 537830960aa769e93530a2fcca50cd35 390 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 250 274 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_15225 537830960aa769e93530a2fcca50cd35 390 SUPERFAMILY SSF52210 232 386 1.31E-41 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_15225 537830960aa769e93530a2fcca50cd35 390 Pfam PF08442 ATP-grasp domain 2 194 2.6E-68 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATC04_15225 537830960aa769e93530a2fcca50cd35 390 Gene3D G3DSA:3.30.470.20 2 227 6.0E-79 T 11-10-2018 ATC04_15225 537830960aa769e93530a2fcca50cd35 390 Gene3D G3DSA:3.30.1490.20 21 96 6.0E-79 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ATC04_15225 537830960aa769e93530a2fcca50cd35 390 SUPERFAMILY SSF56059 3 223 3.89E-65 T 11-10-2018 ATC04_15225 537830960aa769e93530a2fcca50cd35 390 Gene3D G3DSA:3.40.50.261 233 389 1.0E-46 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_15225 537830960aa769e93530a2fcca50cd35 390 PIRSF PIRSF001554 1 389 2.0E-137 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATC04_15225 537830960aa769e93530a2fcca50cd35 390 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 387 38.081 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATC04_15225 537830960aa769e93530a2fcca50cd35 390 Pfam PF00549 CoA-ligase 257 376 1.3E-14 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_15225 537830960aa769e93530a2fcca50cd35 390 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 386 6.5E-124 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATC04_00825 a9a1efcea4104e6c801db79d00eb4a83 186 Pfam PF00436 Single-strand binding protein family 7 106 6.0E-29 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 ATC04_00825 a9a1efcea4104e6c801db79d00eb4a83 186 Hamap MF_00984 Single-stranded DNA-binding protein. 4 113 30.638 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ATC04_00825 a9a1efcea4104e6c801db79d00eb4a83 186 Gene3D G3DSA:2.40.50.140 1 120 1.8E-41 T 11-10-2018 ATC04_00825 a9a1efcea4104e6c801db79d00eb4a83 186 SUPERFAMILY SSF50249 6 186 3.43E-48 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_00825 a9a1efcea4104e6c801db79d00eb4a83 186 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 6 161 8.5E-34 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ATC04_15040 b92ef87492704137042d986c129c6d70 486 Pfam PF11855 Protein of unknown function (DUF3375) 16 481 9.6E-106 T 11-10-2018 IPR021804 Protein of unknown function DUF3375 ATC04_05250 12d378f784bc7f5be023595d92f1e537 147 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.1E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_05250 12d378f784bc7f5be023595d92f1e537 147 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.1E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_05250 12d378f784bc7f5be023595d92f1e537 147 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 1.1E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_05250 12d378f784bc7f5be023595d92f1e537 147 Gene3D G3DSA:1.10.10.10 2 88 1.7E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_05250 12d378f784bc7f5be023595d92f1e537 147 SMART SM00418 7 85 2.2E-22 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_05250 12d378f784bc7f5be023595d92f1e537 147 SUPERFAMILY SSF46785 3 86 1.2E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_05250 12d378f784bc7f5be023595d92f1e537 147 Pfam PF01022 Bacterial regulatory protein, arsR family 15 59 2.1E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_11115 9f804f7a21eeb177a788980fc110b365 364 Gene3D G3DSA:1.10.600.10 12 363 2.5E-73 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ATC04_11115 9f804f7a21eeb177a788980fc110b365 364 SUPERFAMILY SSF48576 52 363 7.02E-58 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ATC04_11115 9f804f7a21eeb177a788980fc110b365 364 Pfam PF00348 Polyprenyl synthetase 62 293 2.3E-47 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 ATC04_11115 9f804f7a21eeb177a788980fc110b365 364 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 248 260 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site ATC04_11115 9f804f7a21eeb177a788980fc110b365 364 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 102 116 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site ATC04_12945 fd6563a11973fa04f6b2ed2487487596 223 Pfam PF00072 Response regulator receiver domain 4 115 3.3E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_12945 fd6563a11973fa04f6b2ed2487487596 223 SUPERFAMILY SSF52172 2 128 2.85E-37 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_12945 fd6563a11973fa04f6b2ed2487487596 223 SUPERFAMILY SSF46785 162 208 1.04E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_12945 fd6563a11973fa04f6b2ed2487487596 223 PIRSF PIRSF006171 1 223 1.2E-77 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 ATC04_12945 fd6563a11973fa04f6b2ed2487487596 223 Gene3D G3DSA:3.40.50.2300 1 138 1.7E-34 T 11-10-2018 ATC04_12945 fd6563a11973fa04f6b2ed2487487596 223 SMART SM00448 2 115 9.1E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_12945 fd6563a11973fa04f6b2ed2487487596 223 Pfam PF08279 HTH domain 166 204 3.4E-5 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 ATC04_12620 eba966fb0b4615884430097f52dbd7db 239 Pfam PF00717 Peptidase S24-like 158 221 9.8E-15 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ATC04_12620 eba966fb0b4615884430097f52dbd7db 239 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 166 177 3.5E-11 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ATC04_12620 eba966fb0b4615884430097f52dbd7db 239 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 155 165 3.5E-11 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ATC04_12620 eba966fb0b4615884430097f52dbd7db 239 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 194 206 3.5E-11 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ATC04_12620 eba966fb0b4615884430097f52dbd7db 239 Gene3D G3DSA:2.10.109.10 124 239 1.0E-39 T 11-10-2018 ATC04_12620 eba966fb0b4615884430097f52dbd7db 239 Pfam PF01726 LexA DNA binding domain 13 76 1.0E-22 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 ATC04_12620 eba966fb0b4615884430097f52dbd7db 239 Hamap MF_00015 LexA repressor [lexA]. 14 239 31.748 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 ATC04_12620 eba966fb0b4615884430097f52dbd7db 239 SUPERFAMILY SSF51306 118 237 4.53E-35 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ATC04_12620 eba966fb0b4615884430097f52dbd7db 239 Gene3D G3DSA:1.10.10.10 14 79 8.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_12620 eba966fb0b4615884430097f52dbd7db 239 TIGRFAM TIGR00498 lexA: repressor LexA 13 238 2.2E-68 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 ATC04_12620 eba966fb0b4615884430097f52dbd7db 239 SUPERFAMILY SSF46785 14 80 3.04E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_02400 abf6863d73cfd91e94bb134a0f629a44 298 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 142 4.7E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02400 abf6863d73cfd91e94bb134a0f629a44 298 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 222 4.7E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02400 abf6863d73cfd91e94bb134a0f629a44 298 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 183 191 4.7E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02400 abf6863d73cfd91e94bb134a0f629a44 298 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 190 218 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_02400 abf6863d73cfd91e94bb134a0f629a44 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 193 3.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02400 abf6863d73cfd91e94bb134a0f629a44 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 55 72 3.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02400 abf6863d73cfd91e94bb134a0f629a44 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 241 3.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02400 abf6863d73cfd91e94bb134a0f629a44 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 142 3.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02400 abf6863d73cfd91e94bb134a0f629a44 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 222 3.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02400 abf6863d73cfd91e94bb134a0f629a44 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 259 279 3.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02400 abf6863d73cfd91e94bb134a0f629a44 298 SUPERFAMILY SSF51735 52 294 1.96E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_02400 abf6863d73cfd91e94bb134a0f629a44 298 Gene3D G3DSA:3.40.50.720 9 297 2.3E-88 T 11-10-2018 ATC04_02400 abf6863d73cfd91e94bb134a0f629a44 298 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 63 294 3.2E-59 T 11-10-2018 ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 Pfam PF13662 Toprim domain 263 333 1.8E-18 T 11-10-2018 IPR006171 TOPRIM domain ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 Gene3D G3DSA:3.90.980.10 112 243 1.2E-39 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 Gene3D G3DSA:3.90.580.10 5 102 7.7E-33 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 TIGRFAM TIGR01391 dnaG: DNA primase 5 422 1.1E-118 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 SMART SM00493 262 339 6.7E-14 T 11-10-2018 IPR006171 TOPRIM domain ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 SMART SM00400 37 91 1.6E-31 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 Pfam PF08275 DNA primase catalytic core, N-terminal domain 128 254 2.6E-40 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 SUPERFAMILY SSF56731 118 430 5.89E-98 T 11-10-2018 ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 Gene3D G3DSA:3.40.1360.10 244 373 3.0E-36 T 11-10-2018 ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 Hamap MF_00974 DNA primase [dnaG]. 4 612 26.205 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 PIRSF PIRSF002811 2 623 5.7E-154 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 Pfam PF10410 DnaB-helicase binding domain of primase 375 429 8.5E-17 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 Pfam PF01807 CHC2 zinc finger 6 101 5.2E-32 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 SUPERFAMILY SSF57783 5 101 4.25E-31 T 11-10-2018 ATC04_13460 2c21176363bff0bcd5d7551de448deea 627 Pfam PF08278 DNA primase DnaG DnaB-binding 484 598 4.1E-11 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 ATC04_17070 cf8839bc106be7c9a23431fb8ad5c7fb 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 116 4.7E-13 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_17070 cf8839bc106be7c9a23431fb8ad5c7fb 381 Gene3D G3DSA:2.40.110.10 121 225 8.3E-29 T 11-10-2018 ATC04_17070 cf8839bc106be7c9a23431fb8ad5c7fb 381 SUPERFAMILY SSF56645 8 236 3.14E-50 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_17070 cf8839bc106be7c9a23431fb8ad5c7fb 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 374 9.3E-26 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_17070 cf8839bc106be7c9a23431fb8ad5c7fb 381 SUPERFAMILY SSF47203 229 378 1.93E-33 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_17070 cf8839bc106be7c9a23431fb8ad5c7fb 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 215 3.2E-20 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_17070 cf8839bc106be7c9a23431fb8ad5c7fb 381 Gene3D G3DSA:1.20.140.10 230 380 3.3E-33 T 11-10-2018 ATC04_17070 cf8839bc106be7c9a23431fb8ad5c7fb 381 Gene3D G3DSA:1.10.540.10 2 118 5.5E-18 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_08155 349b3c6d47908b4db2788e7c2563811c 502 Pfam PF13360 PQQ-like domain 228 416 1.3E-7 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat ATC04_08155 349b3c6d47908b4db2788e7c2563811c 502 Gene3D G3DSA:2.130.10.10 226 453 1.1E-11 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ATC04_08155 349b3c6d47908b4db2788e7c2563811c 502 SUPERFAMILY SSF50969 113 453 8.63E-7 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like ATC04_03170 e13eba2b97937e6384b91c4006fffa10 329 Gene3D G3DSA:3.20.20.100 1 328 4.7E-76 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ATC04_03170 e13eba2b97937e6384b91c4006fffa10 329 Pfam PF00248 Aldo/keto reductase family 16 316 1.4E-57 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain ATC04_03170 e13eba2b97937e6384b91c4006fffa10 329 SUPERFAMILY SSF51430 1 319 3.14E-73 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ATC04_09615 237800da5bd75b636ef1115f27d5b2ff 308 SMART SM00244 25 183 1.7E-55 T 11-10-2018 IPR001107 Band 7 domain ATC04_09615 237800da5bd75b636ef1115f27d5b2ff 308 PRINTS PR00721 Stomatin signature 135 158 1.0E-31 T 11-10-2018 IPR001972 Stomatin family GO:0016020 ATC04_09615 237800da5bd75b636ef1115f27d5b2ff 308 PRINTS PR00721 Stomatin signature 178 199 1.0E-31 T 11-10-2018 IPR001972 Stomatin family GO:0016020 ATC04_09615 237800da5bd75b636ef1115f27d5b2ff 308 PRINTS PR00721 Stomatin signature 80 101 1.0E-31 T 11-10-2018 IPR001972 Stomatin family GO:0016020 ATC04_09615 237800da5bd75b636ef1115f27d5b2ff 308 PRINTS PR00721 Stomatin signature 115 132 1.0E-31 T 11-10-2018 IPR001972 Stomatin family GO:0016020 ATC04_09615 237800da5bd75b636ef1115f27d5b2ff 308 PRINTS PR00721 Stomatin signature 159 177 1.0E-31 T 11-10-2018 IPR001972 Stomatin family GO:0016020 ATC04_09615 237800da5bd75b636ef1115f27d5b2ff 308 PRINTS PR00721 Stomatin signature 32 54 1.0E-31 T 11-10-2018 IPR001972 Stomatin family GO:0016020 ATC04_09615 237800da5bd75b636ef1115f27d5b2ff 308 ProSitePatterns PS01270 Band 7 protein family signature. 139 167 - T 11-10-2018 IPR018080 Band 7/stomatin-like, conserved site ATC04_09615 237800da5bd75b636ef1115f27d5b2ff 308 SUPERFAMILY SSF117892 56 190 3.4E-39 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily ATC04_09615 237800da5bd75b636ef1115f27d5b2ff 308 Gene3D G3DSA:3.30.479.30 53 185 6.5E-43 T 11-10-2018 ATC04_09615 237800da5bd75b636ef1115f27d5b2ff 308 Pfam PF01145 SPFH domain / Band 7 family 29 198 1.6E-34 T 11-10-2018 IPR001107 Band 7 domain ATC04_05500 547b0978399138068e4056b76c0d6fec 284 SMART SM00014 92 199 3.1E-13 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATC04_05500 547b0978399138068e4056b76c0d6fec 284 SUPERFAMILY SSF48317 14 208 8.76E-24 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ATC04_05500 547b0978399138068e4056b76c0d6fec 284 Gene3D G3DSA:1.20.144.10 124 220 3.1E-18 T 11-10-2018 ATC04_05500 547b0978399138068e4056b76c0d6fec 284 Pfam PF01569 PAP2 superfamily 126 203 1.3E-14 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATC04_02530 174040baefb1c80269342f0aac9af302 144 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 61 125 4.2E-17 T 11-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal ATC04_02530 174040baefb1c80269342f0aac9af302 144 SUPERFAMILY SSF50249 3 133 5.82E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_02530 174040baefb1c80269342f0aac9af302 144 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 24 60 3.5E-5 T 11-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal ATC04_12250 9b54068632e17f2504b327f0f7188f2d 571 Pfam PF00005 ABC transporter 393 517 2.9E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_12250 9b54068632e17f2504b327f0f7188f2d 571 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_12250 9b54068632e17f2504b327f0f7188f2d 571 Gene3D G3DSA:3.40.50.300 387 569 3.8E-33 T 11-10-2018 ATC04_12250 9b54068632e17f2504b327f0f7188f2d 571 Pfam PF00005 ABC transporter 40 212 1.1E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_12250 9b54068632e17f2504b327f0f7188f2d 571 Gene3D G3DSA:3.40.50.300 26 306 2.0E-57 T 11-10-2018 ATC04_12250 9b54068632e17f2504b327f0f7188f2d 571 SMART SM00382 397 566 8.6E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_12250 9b54068632e17f2504b327f0f7188f2d 571 SMART SM00382 49 257 1.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_12250 9b54068632e17f2504b327f0f7188f2d 571 SUPERFAMILY SSF52540 393 546 1.28E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12250 9b54068632e17f2504b327f0f7188f2d 571 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_12250 9b54068632e17f2504b327f0f7188f2d 571 SUPERFAMILY SSF52540 29 262 7.76E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13860 cd0e7261d629f7fcde332869ad14620c 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 4.6E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_13860 cd0e7261d629f7fcde332869ad14620c 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 4.6E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_13860 cd0e7261d629f7fcde332869ad14620c 190 Gene3D G3DSA:1.10.10.60 4 65 1.3E-15 T 11-10-2018 ATC04_13860 cd0e7261d629f7fcde332869ad14620c 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 3.1E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_13860 cd0e7261d629f7fcde332869ad14620c 190 SUPERFAMILY SSF46689 8 75 8.21E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_13860 cd0e7261d629f7fcde332869ad14620c 190 Gene3D G3DSA:1.10.357.10 89 185 4.8E-7 T 11-10-2018 ATC04_06315 68dde6ffd3954d15a23c2b092daf3a6b 117 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 110 5.2E-15 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ATC04_06315 68dde6ffd3954d15a23c2b092daf3a6b 117 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 116 9.6E-24 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ATC04_06315 68dde6ffd3954d15a23c2b092daf3a6b 117 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 75 4.0E-11 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ATC04_06315 68dde6ffd3954d15a23c2b092daf3a6b 117 Gene3D G3DSA:3.90.470.20 1 116 6.0E-35 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ATC04_06315 68dde6ffd3954d15a23c2b092daf3a6b 117 SUPERFAMILY SSF56214 1 115 1.57E-26 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ATC04_06315 68dde6ffd3954d15a23c2b092daf3a6b 117 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 116 20.394 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ATC04_06315 68dde6ffd3954d15a23c2b092daf3a6b 117 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 116 1.6E-17 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ATC04_04625 295a75a4b2a7153be4884dc09d2bb3cb 270 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 24 92 4.4E-18 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ATC04_04625 295a75a4b2a7153be4884dc09d2bb3cb 270 SUPERFAMILY SSF53223 5 104 3.17E-27 T 11-10-2018 ATC04_04625 295a75a4b2a7153be4884dc09d2bb3cb 270 SUPERFAMILY SSF51735 105 264 5.91E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_04625 295a75a4b2a7153be4884dc09d2bb3cb 270 Gene3D G3DSA:3.40.50.720 103 270 3.0E-35 T 11-10-2018 ATC04_04625 295a75a4b2a7153be4884dc09d2bb3cb 270 Gene3D G3DSA:3.40.50.10860 3 101 3.0E-32 T 11-10-2018 ATC04_06920 78a2453bcba0146303eeff06b902b691 351 Gene3D G3DSA:3.20.20.210 4 351 2.7E-135 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ATC04_06920 78a2453bcba0146303eeff06b902b691 351 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 14 350 6.0E-116 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ATC04_06920 78a2453bcba0146303eeff06b902b691 351 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 16 351 41.071 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ATC04_06920 78a2453bcba0146303eeff06b902b691 351 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 19 350 6.3E-110 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ATC04_06920 78a2453bcba0146303eeff06b902b691 351 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 149 165 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ATC04_06920 78a2453bcba0146303eeff06b902b691 351 SUPERFAMILY SSF51726 18 350 7.15E-96 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ATC04_06920 78a2453bcba0146303eeff06b902b691 351 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 32 41 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ATC04_11985 675b0ca68f0cf4a885cab70fec57030e 158 SUPERFAMILY SSF52402 19 153 1.09E-16 T 11-10-2018 ATC04_11985 675b0ca68f0cf4a885cab70fec57030e 158 Pfam PF00582 Universal stress protein family 16 153 9.0E-14 T 11-10-2018 IPR006016 UspA ATC04_11985 675b0ca68f0cf4a885cab70fec57030e 158 Gene3D G3DSA:3.40.50.620 14 154 9.6E-17 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_06835 2cbb371e5e3a547a7adcd555bee36ce4 260 SUPERFAMILY SSF102405 43 244 3.82E-62 T 11-10-2018 ATC04_06835 2cbb371e5e3a547a7adcd555bee36ce4 260 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 72 244 6.4E-42 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG ATC04_06835 2cbb371e5e3a547a7adcd555bee36ce4 260 Gene3D G3DSA:3.40.50.450 43 259 4.7E-67 T 11-10-2018 ATC04_06835 2cbb371e5e3a547a7adcd555bee36ce4 260 Pfam PF03641 Possible lysine decarboxylase 114 243 5.7E-33 T 11-10-2018 IPR031100 LOG family ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 Gene3D G3DSA:3.40.50.1000 289 551 3.4E-67 T 11-10-2018 IPR023214 HAD superfamily ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 310 316 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 Pfam PF00122 E1-E2 ATPase 127 287 1.5E-37 T 11-10-2018 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 SUPERFAMILY SSF81665 66 574 3.01E-11 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 512 3.5E-30 T 11-10-2018 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 Gene3D G3DSA:2.70.150.20 100 220 3.6E-29 T 11-10-2018 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 64 603 1.9E-140 T 11-10-2018 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 SUPERFAMILY SSF81653 128 216 5.23E-19 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 SUPERFAMILY SSF56784 308 598 8.8E-38 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 Gene3D G3DSA:3.40.1110.10 319 431 3.4E-67 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 517 7.7E-24 T 11-10-2018 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 534 7.7E-24 T 11-10-2018 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 424 435 7.7E-24 T 11-10-2018 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 166 180 7.7E-24 T 11-10-2018 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 308 322 7.7E-24 T 11-10-2018 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 447 457 7.7E-24 T 11-10-2018 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 64 600 1.6E-152 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ATC04_13985 d06ea761ef67b6ba86246c59ca43cdf0 630 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 86 578 6.2E-61 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 4 345 4.8E-115 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 PRINTS PR00625 DnaJ domain signature 23 38 8.5E-24 T 11-10-2018 IPR001623 DnaJ domain ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 PRINTS PR00625 DnaJ domain signature 5 23 8.5E-24 T 11-10-2018 IPR001623 DnaJ domain ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 PRINTS PR00625 DnaJ domain signature 39 59 8.5E-24 T 11-10-2018 IPR001623 DnaJ domain ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 PRINTS PR00625 DnaJ domain signature 59 78 8.5E-24 T 11-10-2018 IPR001623 DnaJ domain ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 SMART SM00271 2 59 5.3E-28 T 11-10-2018 IPR001623 DnaJ domain ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 369 35.315 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 SUPERFAMILY SSF49493 111 253 1.07E-14 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 ProSitePatterns PS00636 Nt-dnaJ domain signature. 44 63 - T 11-10-2018 IPR018253 DnaJ domain, conserved site ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 Gene3D G3DSA:1.10.287.110 2 107 7.3E-34 T 11-10-2018 IPR036869 Chaperone J-domain superfamily ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 Pfam PF00226 DnaJ domain 4 64 1.1E-24 T 11-10-2018 IPR001623 DnaJ domain ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 Gene3D G3DSA:2.10.230.10 139 203 1.8E-30 T 11-10-2018 ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 Pfam PF01556 DnaJ C terminal domain 114 329 4.7E-34 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 SUPERFAMILY SSF49493 254 340 5.36E-21 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 SUPERFAMILY SSF57938 126 207 2.35E-18 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 Pfam PF00684 DnaJ central domain 139 203 1.9E-12 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 SUPERFAMILY SSF46565 3 97 2.62E-31 T 11-10-2018 IPR036869 Chaperone J-domain superfamily ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 Gene3D G3DSA:2.60.260.20 109 245 1.8E-30 T 11-10-2018 ATC04_09425 18cc1a66fd4e4867313d0d1c7a79a32e 373 Gene3D G3DSA:2.60.260.20 250 358 3.9E-27 T 11-10-2018 ATC04_03390 d1dd28a91f45eac472cfc3d4b554d120 400 Pfam PF01546 Peptidase family M20/M25/M40 92 334 2.2E-8 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ATC04_03390 d1dd28a91f45eac472cfc3d4b554d120 400 Gene3D G3DSA:3.40.630.10 27 369 1.2E-107 T 11-10-2018 ATC04_03390 d1dd28a91f45eac472cfc3d4b554d120 400 SUPERFAMILY SSF55031 172 280 8.82E-20 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ATC04_03390 d1dd28a91f45eac472cfc3d4b554d120 400 SUPERFAMILY SSF53187 12 382 7.85E-54 T 11-10-2018 ATC04_03390 d1dd28a91f45eac472cfc3d4b554d120 400 Pfam PF07687 Peptidase dimerisation domain 172 261 2.4E-4 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ATC04_03390 d1dd28a91f45eac472cfc3d4b554d120 400 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 28 341 4.1E-58 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ATC04_03390 d1dd28a91f45eac472cfc3d4b554d120 400 PIRSF PIRSF037226 4 400 2.0E-116 T 11-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted ATC04_03390 d1dd28a91f45eac472cfc3d4b554d120 400 Gene3D G3DSA:3.30.70.360 173 290 1.2E-107 T 11-10-2018 ATC04_08775 6594fbaa0816853f0eb5261a56ef81bd 317 Gene3D G3DSA:1.10.10.10 1 84 1.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_08775 6594fbaa0816853f0eb5261a56ef81bd 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.0E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_08775 6594fbaa0816853f0eb5261a56ef81bd 317 SUPERFAMILY SSF53850 90 307 3.52E-34 T 11-10-2018 ATC04_08775 6594fbaa0816853f0eb5261a56ef81bd 317 Gene3D G3DSA:3.40.190.290 90 312 8.7E-40 T 11-10-2018 ATC04_08775 6594fbaa0816853f0eb5261a56ef81bd 317 SUPERFAMILY SSF46785 1 110 2.07E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_08775 6594fbaa0816853f0eb5261a56ef81bd 317 Pfam PF03466 LysR substrate binding domain 88 302 2.5E-35 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_08775 6594fbaa0816853f0eb5261a56ef81bd 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_08775 6594fbaa0816853f0eb5261a56ef81bd 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_08775 6594fbaa0816853f0eb5261a56ef81bd 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_12405 b175db7a956b150528a01c4785051931 338 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 9 232 2.3E-36 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA ATC04_12405 b175db7a956b150528a01c4785051931 338 SUPERFAMILY SSF56784 6 258 5.93E-52 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_12405 b175db7a956b150528a01c4785051931 338 PIRSF PIRSF000915 1 263 1.1E-57 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA ATC04_12405 b175db7a956b150528a01c4785051931 338 Pfam PF13344 Haloacid dehalogenase-like hydrolase 9 109 2.4E-21 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA ATC04_12405 b175db7a956b150528a01c4785051931 338 Gene3D G3DSA:3.40.50.1000 7 235 4.4E-74 T 11-10-2018 IPR023214 HAD superfamily ATC04_12405 b175db7a956b150528a01c4785051931 338 Gene3D G3DSA:3.40.50.1000 74 185 4.4E-74 T 11-10-2018 IPR023214 HAD superfamily ATC04_12405 b175db7a956b150528a01c4785051931 338 Pfam PF13242 HAD-hyrolase-like 185 257 3.9E-13 T 11-10-2018 ATC04_03895 035fc9dedc1974f27dc6f04d79a3ce57 190 Pfam PF11259 Protein of unknown function (DUF3060) 132 174 6.9E-9 T 11-10-2018 IPR021417 Protein of unknown function DUF3060 ATC04_03895 035fc9dedc1974f27dc6f04d79a3ce57 190 Pfam PF11259 Protein of unknown function (DUF3060) 110 147 2.4E-6 T 11-10-2018 IPR021417 Protein of unknown function DUF3060 ATC04_14425 a738bd441e225c0d699e22b9a63aa618 437 Pfam PF02885 Glycosyl transferase family, helical bundle domain 10 71 8.3E-15 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_14425 a738bd441e225c0d699e22b9a63aa618 437 Gene3D G3DSA:3.90.1170.30 331 416 6.6E-129 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_14425 a738bd441e225c0d699e22b9a63aa618 437 Gene3D G3DSA:1.20.970.10 4 72 4.7E-21 T 11-10-2018 ATC04_14425 a738bd441e225c0d699e22b9a63aa618 437 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 121 136 - T 11-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_14425 a738bd441e225c0d699e22b9a63aa618 437 SMART SM00941 345 419 7.0E-29 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_14425 a738bd441e225c0d699e22b9a63aa618 437 Pfam PF00591 Glycosyl transferase family, a/b domain 89 296 2.5E-30 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_14425 a738bd441e225c0d699e22b9a63aa618 437 SUPERFAMILY SSF52418 89 327 2.09E-77 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_14425 a738bd441e225c0d699e22b9a63aa618 437 SUPERFAMILY SSF54680 332 421 1.57E-23 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_14425 a738bd441e225c0d699e22b9a63aa618 437 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 348 418 1.6E-20 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_14425 a738bd441e225c0d699e22b9a63aa618 437 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 9 418 7.2E-161 T 11-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_14425 a738bd441e225c0d699e22b9a63aa618 437 SUPERFAMILY SSF47648 7 74 2.75E-18 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_14425 a738bd441e225c0d699e22b9a63aa618 437 Gene3D G3DSA:3.40.1030.10 91 330 6.6E-129 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_14425 a738bd441e225c0d699e22b9a63aa618 437 PIRSF PIRSF000478 5 435 5.7E-145 T 11-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_14820 a7a7d099eb6d0b3cc40cbd34aedb352b 444 Gene3D G3DSA:1.20.1720.10 1 204 6.0E-43 T 11-10-2018 ATC04_14820 a7a7d099eb6d0b3cc40cbd34aedb352b 444 Pfam PF07690 Major Facilitator Superfamily 2 393 1.2E-49 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_14820 a7a7d099eb6d0b3cc40cbd34aedb352b 444 Gene3D G3DSA:1.20.1250.20 243 436 1.0E-9 T 11-10-2018 ATC04_14820 a7a7d099eb6d0b3cc40cbd34aedb352b 444 SUPERFAMILY SSF103473 2 430 2.22E-54 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_06880 43e4547a23e59d66f1c91a65efb89d54 515 Pfam PF00557 Metallopeptidase family M24 250 489 1.5E-48 T 11-10-2018 IPR000994 Peptidase M24 ATC04_06880 43e4547a23e59d66f1c91a65efb89d54 515 Gene3D G3DSA:3.90.230.10 243 514 9.8E-77 T 11-10-2018 ATC04_06880 43e4547a23e59d66f1c91a65efb89d54 515 Pfam PF05195 Aminopeptidase P, N-terminal domain 57 184 9.3E-19 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 ATC04_06880 43e4547a23e59d66f1c91a65efb89d54 515 SUPERFAMILY SSF55920 244 511 4.19E-63 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like ATC04_06880 43e4547a23e59d66f1c91a65efb89d54 515 SMART SM01011 50 194 1.0E-27 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 ATC04_06880 43e4547a23e59d66f1c91a65efb89d54 515 Gene3D G3DSA:3.40.350.10 52 240 6.3E-16 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ATC04_06880 43e4547a23e59d66f1c91a65efb89d54 515 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 423 435 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ATC04_06880 43e4547a23e59d66f1c91a65efb89d54 515 SUPERFAMILY SSF53092 55 243 1.05E-24 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ATC04_02325 3447be017dd4eb99c72b50de36adfced 158 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 5 147 9.5E-42 T 11-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain ATC04_02325 3447be017dd4eb99c72b50de36adfced 158 Gene3D G3DSA:2.30.110.10 2 158 1.0E-42 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ATC04_02325 3447be017dd4eb99c72b50de36adfced 158 SUPERFAMILY SSF50475 6 131 2.24E-28 T 11-10-2018 ATC04_10300 47b142af6abce38d124761122bf91d18 415 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 413 5.6E-151 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 ATC04_10300 47b142af6abce38d124761122bf91d18 415 SUPERFAMILY SSF53901 214 414 1.44E-61 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_10300 47b142af6abce38d124761122bf91d18 415 PIRSF PIRSF000447 1 415 2.5E-143 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 ATC04_10300 47b142af6abce38d124761122bf91d18 415 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 3.4E-30 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal ATC04_10300 47b142af6abce38d124761122bf91d18 415 Gene3D G3DSA:3.40.47.10 1 255 1.1E-78 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_10300 47b142af6abce38d124761122bf91d18 415 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site ATC04_10300 47b142af6abce38d124761122bf91d18 415 Gene3D G3DSA:3.40.47.10 257 404 8.9E-44 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_10300 47b142af6abce38d124761122bf91d18 415 SUPERFAMILY SSF53901 3 252 2.09E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_10300 47b142af6abce38d124761122bf91d18 415 SMART SM00825 Beta-ketoacyl synthase 5 415 1.5E-13 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ATC04_10300 47b142af6abce38d124761122bf91d18 415 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 1.4E-56 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal ATC04_05950 2b558b5e9bef68a6a8f107d54c0d4470 738 Pfam PF13090 Polyphosphate kinase C-terminal domain 376 712 3.6E-154 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 ATC04_05950 2b558b5e9bef68a6a8f107d54c0d4470 738 SUPERFAMILY SSF143724 148 354 1.16E-60 T 11-10-2018 ATC04_05950 2b558b5e9bef68a6a8f107d54c0d4470 738 Pfam PF02503 Polyphosphate kinase middle domain 160 357 7.7E-60 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 ATC04_05950 2b558b5e9bef68a6a8f107d54c0d4470 738 Hamap MF_00347 Polyphosphate kinase [ppk]. 42 730 28.669 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ATC04_05950 2b558b5e9bef68a6a8f107d54c0d4470 738 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 44 713 3.2E-251 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ATC04_05950 2b558b5e9bef68a6a8f107d54c0d4470 738 SUPERFAMILY SSF140356 42 145 1.96E-34 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 ATC04_05950 2b558b5e9bef68a6a8f107d54c0d4470 738 PIRSF PIRSF015589 32 738 1.3E-270 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ATC04_05950 2b558b5e9bef68a6a8f107d54c0d4470 738 SUPERFAMILY SSF56024 547 728 1.05E-65 T 11-10-2018 ATC04_05950 2b558b5e9bef68a6a8f107d54c0d4470 738 SUPERFAMILY SSF56024 371 541 1.38E-57 T 11-10-2018 ATC04_05950 2b558b5e9bef68a6a8f107d54c0d4470 738 Pfam PF13089 Polyphosphate kinase N-terminal domain 45 150 1.6E-34 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 ATC04_05950 2b558b5e9bef68a6a8f107d54c0d4470 738 Gene3D G3DSA:3.30.1840.10 39 353 2.2E-105 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 ATC04_05950 2b558b5e9bef68a6a8f107d54c0d4470 738 Gene3D G3DSA:3.30.870.10 364 546 3.3E-75 T 11-10-2018 ATC04_05950 2b558b5e9bef68a6a8f107d54c0d4470 738 Gene3D G3DSA:3.30.870.10 547 732 2.8E-62 T 11-10-2018 ATC04_10675 f76db6685f7bed342b1b68af617a6a2b 439 SUPERFAMILY SSF55205 4 437 1.18E-108 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ATC04_10675 f76db6685f7bed342b1b68af617a6a2b 439 Gene3D G3DSA:3.65.10.10 22 235 5.2E-135 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ATC04_10675 f76db6685f7bed342b1b68af617a6a2b 439 Gene3D G3DSA:3.65.10.10 7 435 5.2E-135 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ATC04_10675 f76db6685f7bed342b1b68af617a6a2b 439 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 2 438 34.8 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_10675 f76db6685f7bed342b1b68af617a6a2b 439 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4 436 4.8E-129 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_10675 f76db6685f7bed342b1b68af617a6a2b 439 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 428 1.5E-58 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 ATC04_08735 c7085825e68862216895d6d8b47d98cd 165 Gene3D G3DSA:3.30.530.20 14 164 1.1E-22 T 11-10-2018 IPR023393 START-like domain superfamily ATC04_08735 c7085825e68862216895d6d8b47d98cd 165 SUPERFAMILY SSF55961 4 162 2.08E-28 T 11-10-2018 ATC04_08735 c7085825e68862216895d6d8b47d98cd 165 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 30 138 1.4E-10 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like ATC04_16635 b3731474d3093747e84d3975ae265ce3 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 305 7.2E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_16635 b3731474d3093747e84d3975ae265ce3 318 Gene3D G3DSA:1.10.3720.10 92 302 2.3E-22 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_16635 b3731474d3093747e84d3975ae265ce3 318 SUPERFAMILY SSF161098 93 291 2.49E-17 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_08400 f0148489210636152bdcd4d6b4c7a6f0 286 SUPERFAMILY SSF54637 12 112 1.39E-35 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_08400 f0148489210636152bdcd4d6b4c7a6f0 286 Pfam PF13622 Thioesterase-like superfamily 29 279 6.1E-58 T 11-10-2018 ATC04_08400 f0148489210636152bdcd4d6b4c7a6f0 286 Gene3D G3DSA:3.10.129.90 5 281 1.8E-101 T 11-10-2018 ATC04_08400 f0148489210636152bdcd4d6b4c7a6f0 286 SUPERFAMILY SSF54637 115 282 4.1E-47 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_11655 d7f7ba009040f4cc8c00b72f1e9862cf 184 SUPERFAMILY SSF55620 2 178 1.41E-60 T 11-10-2018 ATC04_11655 d7f7ba009040f4cc8c00b72f1e9862cf 184 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 2 180 30.196 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ATC04_11655 d7f7ba009040f4cc8c00b72f1e9862cf 184 Gene3D G3DSA:1.10.286.10 1 42 7.3E-6 T 11-10-2018 ATC04_11655 d7f7ba009040f4cc8c00b72f1e9862cf 184 Pfam PF01227 GTP cyclohydrolase I 7 177 1.1E-55 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ATC04_11655 d7f7ba009040f4cc8c00b72f1e9862cf 184 Gene3D G3DSA:3.30.1130.10 48 180 3.4E-51 T 11-10-2018 ATC04_11655 d7f7ba009040f4cc8c00b72f1e9862cf 184 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 107 117 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 Gene3D G3DSA:1.10.1040.10 181 434 3.1E-97 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.1E-78 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.1E-78 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 1.1E-78 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.1E-78 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 250 277 1.1E-78 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.1E-78 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 Gene3D G3DSA:1.20.5.320 435 469 3.7E-16 T 11-10-2018 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 PIRSF PIRSF000109 1 475 6.8E-201 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 162 2.3E-49 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 254 266 - T 11-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 SMART SM01350 179 467 8.9E-190 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 SUPERFAMILY SSF51735 3 173 7.8E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 Gene3D G3DSA:3.40.50.720 1 180 1.4E-51 T 11-10-2018 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 466 5.1E-120 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 467 2.3E-200 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATC04_10215 0ae59a6591b8431d1775f93212f73d05 479 SUPERFAMILY SSF48179 177 470 4.76E-113 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_09160 eb4523462ce7b79c66cfcdfac15a5310 440 Gene3D G3DSA:3.40.50.800 345 427 4.0E-14 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily ATC04_09160 eb4523462ce7b79c66cfcdfac15a5310 440 PIRSF PIRSF001549 1 435 4.9E-98 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 ATC04_09160 eb4523462ce7b79c66cfcdfac15a5310 440 SUPERFAMILY SSF52954 349 423 6.22E-14 T 11-10-2018 ATC04_09160 eb4523462ce7b79c66cfcdfac15a5310 440 SUPERFAMILY SSF55681 7 335 1.83E-60 T 11-10-2018 ATC04_09160 eb4523462ce7b79c66cfcdfac15a5310 440 Pfam PF13393 Histidyl-tRNA synthetase 9 330 2.4E-27 T 11-10-2018 ATC04_09160 eb4523462ce7b79c66cfcdfac15a5310 440 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 423 9.5E-105 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 ATC04_09160 eb4523462ce7b79c66cfcdfac15a5310 440 Gene3D G3DSA:3.30.930.10 3 344 1.0E-86 T 11-10-2018 ATC04_09160 eb4523462ce7b79c66cfcdfac15a5310 440 Pfam PF03129 Anticodon binding domain 361 421 6.9E-7 T 11-10-2018 IPR004154 Anticodon-binding ATC04_06255 9687057a6251418812d31f56cee7ff38 149 SUPERFAMILY SSF64263 1 123 1.83E-41 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06255 9687057a6251418812d31f56cee7ff38 149 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06255 9687057a6251418812d31f56cee7ff38 149 TIGRFAM TIGR00059 L17: ribosomal protein bL17 9 121 1.3E-34 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06255 9687057a6251418812d31f56cee7ff38 149 Pfam PF01196 Ribosomal protein L17 21 121 3.2E-34 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06255 9687057a6251418812d31f56cee7ff38 149 Gene3D G3DSA:3.90.1030.10 3 130 3.8E-41 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06255 9687057a6251418812d31f56cee7ff38 149 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 121 24.689 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 8.1E-15 T 11-10-2018 ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 253 267 8.1E-15 T 11-10-2018 ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 22 44 8.1E-15 T 11-10-2018 ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 292 299 8.1E-15 T 11-10-2018 ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 Gene3D G3DSA:3.50.50.60 24 333 6.4E-89 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 23 326 1.3E-48 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 SUPERFAMILY SSF51905 22 212 6.11E-38 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 Gene3D G3DSA:3.30.390.30 345 430 8.8E-29 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 SUPERFAMILY SSF55424 337 429 1.21E-25 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 Gene3D G3DSA:3.50.50.60 135 259 6.4E-89 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 6.4E-16 T 11-10-2018 ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 122 140 6.4E-16 T 11-10-2018 ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 277 299 6.4E-16 T 11-10-2018 ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 23 42 6.4E-16 T 11-10-2018 ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 268 6.4E-16 T 11-10-2018 ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 Pfam PF14759 Reductase C-terminal 345 428 1.2E-27 T 11-10-2018 IPR028202 Reductase, C-terminal ATC04_02120 f4acdf230b25c73a445d3762a9b65428 430 SUPERFAMILY SSF51905 166 335 4.81E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 Gene3D G3DSA:1.10.150.20 571 657 5.4E-24 T 11-10-2018 ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 348 363 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 133 162 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 339 415 6.3E-30 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 SUPERFAMILY SSF56091 17 335 2.88E-111 T 11-10-2018 ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 PIRSF PIRSF001604 11 741 2.6E-224 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 SUPERFAMILY SSF52113 667 734 6.73E-16 T 11-10-2018 IPR036420 BRCT domain superfamily ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 SUPERFAMILY SSF47781 420 655 4.45E-37 T 11-10-2018 IPR010994 RuvA domain 2-like ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 Hamap MF_01588 DNA ligase [ligA]. 17 738 50.197 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 20 335 9.3E-116 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 SMART SM00532 18 466 7.1E-236 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 26 480 9.9E-171 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 665 732 5.9E-9 T 11-10-2018 IPR001357 BRCT domain ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 Pfam PF12826 Helix-hairpin-helix motif 577 645 1.1E-16 T 11-10-2018 ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 SUPERFAMILY SSF50249 334 416 2.23E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 Gene3D G3DSA:1.10.287.610 8 82 1.0E-24 T 11-10-2018 ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 424 451 9.2E-7 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 Gene3D G3DSA:2.40.50.140 336 422 6.2E-32 T 11-10-2018 ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 Gene3D G3DSA:3.30.470.90 83 335 7.2E-98 T 11-10-2018 ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 SMART SM00292 664 741 4.0E-9 T 11-10-2018 IPR001357 BRCT domain ATC04_13820 f01391f0bd7ea1d42d86c62d739c69c4 756 Gene3D G3DSA:3.40.50.10190 662 741 4.9E-21 T 11-10-2018 IPR036420 BRCT domain superfamily ATC04_01410 aa97c0ec49e2733082b47e714c6fb3b4 255 Pfam PF01144 Coenzyme A transferase 30 208 6.1E-6 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_01410 aa97c0ec49e2733082b47e714c6fb3b4 255 SMART SM00882 9 210 0.004 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_01410 aa97c0ec49e2733082b47e714c6fb3b4 255 Gene3D G3DSA:3.40.1080.10 4 244 1.3E-44 T 11-10-2018 ATC04_01410 aa97c0ec49e2733082b47e714c6fb3b4 255 SUPERFAMILY SSF100950 5 246 2.01E-45 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_12485 5303dc759802d6e05d4e5a76de3853d7 390 SUPERFAMILY SSF56266 6 386 4.32E-118 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ATC04_12485 5303dc759802d6e05d4e5a76de3853d7 390 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 17 388 7.0E-137 T 11-10-2018 ATC04_12485 5303dc759802d6e05d4e5a76de3853d7 390 Gene3D G3DSA:3.60.70.12 1 185 8.6E-60 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ATC04_12485 5303dc759802d6e05d4e5a76de3853d7 390 Gene3D G3DSA:3.30.2330.10 186 264 1.2E-24 T 11-10-2018 ATC04_12485 5303dc759802d6e05d4e5a76de3853d7 390 Gene3D G3DSA:3.10.20.340 265 390 2.1E-37 T 11-10-2018 ATC04_12485 5303dc759802d6e05d4e5a76de3853d7 390 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 2 389 8.0E-102 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ATC04_12485 5303dc759802d6e05d4e5a76de3853d7 390 Pfam PF01960 ArgJ family 11 390 2.4E-123 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ATC04_12485 5303dc759802d6e05d4e5a76de3853d7 390 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 390 127.179 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ATC04_08195 b5fad7e19330df291eca14f4288bcd88 326 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 304 2.5E-103 T 11-10-2018 IPR033981 Sporulation regulator WhiA-like ATC04_08195 b5fad7e19330df291eca14f4288bcd88 326 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 306 29.735 T 11-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 ATC04_08195 b5fad7e19330df291eca14f4288bcd88 326 Gene3D G3DSA:3.10.28.10 1 214 1.3E-20 T 11-10-2018 IPR027434 Homing endonuclease ATC04_08195 b5fad7e19330df291eca14f4288bcd88 326 Gene3D G3DSA:1.10.10.10 216 307 1.6E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_08195 b5fad7e19330df291eca14f4288bcd88 326 Pfam PF02650 WhiA C-terminal HTH domain 221 303 4.5E-20 T 11-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal ATC04_08195 b5fad7e19330df291eca14f4288bcd88 326 Pfam PF14527 WhiA LAGLIDADG-like domain 127 218 1.6E-24 T 11-10-2018 IPR039518 WhiA, LAGLIDADG-like domain ATC04_08195 b5fad7e19330df291eca14f4288bcd88 326 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 20 104 2.5E-24 T 11-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain ATC04_03060 5364a398228557647f9c6ed2a9e4996f 405 Gene3D G3DSA:2.30.40.10 18 391 3.2E-112 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_03060 5364a398228557647f9c6ed2a9e4996f 405 SUPERFAMILY SSF51556 53 354 7.57E-79 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_03060 5364a398228557647f9c6ed2a9e4996f 405 Gene3D G3DSA:3.20.20.140 54 350 3.2E-112 T 11-10-2018 ATC04_03060 5364a398228557647f9c6ed2a9e4996f 405 SUPERFAMILY SSF51338 3 396 5.12E-16 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_03060 5364a398228557647f9c6ed2a9e4996f 405 Pfam PF01979 Amidohydrolase family 49 391 2.0E-45 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ATC04_02985 ddf88c30f4193bfe34cf0334b6ac02d3 391 SUPERFAMILY SSF54373 222 322 1.06E-9 T 11-10-2018 ATC04_02985 ddf88c30f4193bfe34cf0334b6ac02d3 391 Gene3D G3DSA:3.50.50.60 6 362 1.2E-94 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_02985 ddf88c30f4193bfe34cf0334b6ac02d3 391 SUPERFAMILY SSF51905 5 376 2.07E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_02985 ddf88c30f4193bfe34cf0334b6ac02d3 391 Pfam PF01266 FAD dependent oxidoreductase 6 359 4.5E-47 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATC04_02985 ddf88c30f4193bfe34cf0334b6ac02d3 391 Gene3D G3DSA:3.30.9.10 88 321 1.2E-94 T 11-10-2018 ATC04_12685 a70afc6db3326255d3b6ce683e559583 1009 SUPERFAMILY SSF46785 867 931 1.9E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_12685 a70afc6db3326255d3b6ce683e559583 1009 Pfam PF01580 FtsK/SpoIIIE family 567 767 7.4E-57 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ATC04_12685 a70afc6db3326255d3b6ce683e559583 1009 Gene3D G3DSA:3.30.980.40 461 563 2.7E-29 T 11-10-2018 ATC04_12685 a70afc6db3326255d3b6ce683e559583 1009 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 100 223 7.1E-6 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region ATC04_12685 a70afc6db3326255d3b6ce683e559583 1009 Gene3D G3DSA:1.10.10.10 862 926 2.8E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_12685 a70afc6db3326255d3b6ce683e559583 1009 Gene3D G3DSA:3.40.50.300 564 853 3.0E-103 T 11-10-2018 ATC04_12685 a70afc6db3326255d3b6ce683e559583 1009 Pfam PF09397 Ftsk gamma domain 870 927 2.1E-22 T 11-10-2018 IPR018541 FtsK gamma domain ATC04_12685 a70afc6db3326255d3b6ce683e559583 1009 SMART SM00843 865 930 1.3E-29 T 11-10-2018 IPR018541 FtsK gamma domain ATC04_12685 a70afc6db3326255d3b6ce683e559583 1009 SUPERFAMILY SSF52540 541 840 3.45E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12685 a70afc6db3326255d3b6ce683e559583 1009 SMART SM00382 602 800 0.0019 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04075 fac6ce7630970b5ef7443a6bd698919b 402 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 377 2.1E-79 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ATC04_04075 fac6ce7630970b5ef7443a6bd698919b 402 Pfam PF07687 Peptidase dimerisation domain 194 291 1.5E-13 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ATC04_04075 fac6ce7630970b5ef7443a6bd698919b 402 SUPERFAMILY SSF55031 193 291 1.44E-26 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ATC04_04075 fac6ce7630970b5ef7443a6bd698919b 402 SUPERFAMILY SSF53187 8 386 1.18E-67 T 11-10-2018 ATC04_04075 fac6ce7630970b5ef7443a6bd698919b 402 Gene3D G3DSA:3.30.70.360 190 305 5.2E-108 T 11-10-2018 ATC04_04075 fac6ce7630970b5ef7443a6bd698919b 402 Pfam PF01546 Peptidase family M20/M25/M40 71 377 6.4E-20 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ATC04_04075 fac6ce7630970b5ef7443a6bd698919b 402 Gene3D G3DSA:3.40.630.10 21 377 5.2E-108 T 11-10-2018 ATC04_04075 fac6ce7630970b5ef7443a6bd698919b 402 PIRSF PIRSF005962 1 392 1.2E-94 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 Gene3D G3DSA:3.30.70.240 614 684 1.4E-85 T 11-10-2018 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 PRINTS PR00315 GTP-binding elongation factor signature 132 141 2.0E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 PRINTS PR00315 GTP-binding elongation factor signature 80 90 2.0E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 PRINTS PR00315 GTP-binding elongation factor signature 60 68 2.0E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 PRINTS PR00315 GTP-binding elongation factor signature 96 107 2.0E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 1.9E-14 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 Gene3D G3DSA:2.40.30.10 294 412 2.6E-44 T 11-10-2018 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 SUPERFAMILY SSF52540 8 288 6.48E-109 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 Pfam PF14492 Elongation Factor G, domain II 411 485 6.6E-32 T 11-10-2018 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 Pfam PF00679 Elongation factor G C-terminus 610 696 1.1E-29 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 Gene3D G3DSA:3.30.70.870 413 490 6.9E-30 T 11-10-2018 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 Gene3D G3DSA:3.30.230.10 491 697 1.4E-85 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 Gene3D G3DSA:3.40.50.300 4 293 5.8E-112 T 11-10-2018 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 181 1.9E-36 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 SUPERFAMILY SSF54980 613 700 4.32E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 SUPERFAMILY SSF50447 271 411 4.62E-33 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 7 701 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 SUPERFAMILY SSF54211 486 609 1.72E-38 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 SUPERFAMILY SSF54980 411 488 1.8E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 Hamap MF_00054_B Elongation factor G [fusA]. 8 701 109.101 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 SMART SM00838 610 697 2.9E-56 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 SMART SM00889 487 608 1.3E-68 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 Pfam PF03764 Elongation factor G, domain IV 486 608 2.8E-46 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ATC04_06085 b55561be4ae953a9fd68a5a93c190899 704 Pfam PF00009 Elongation factor Tu GTP binding domain 11 288 2.3E-67 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_04925 d2528398a84d53785b941b1e951fd085 169 Gene3D G3DSA:3.40.50.2300 1 165 4.1E-42 T 11-10-2018 ATC04_04925 d2528398a84d53785b941b1e951fd085 169 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.4E-16 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ATC04_04925 d2528398a84d53785b941b1e951fd085 169 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 1.4E-16 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ATC04_04925 d2528398a84d53785b941b1e951fd085 169 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 1.4E-16 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ATC04_04925 d2528398a84d53785b941b1e951fd085 169 SUPERFAMILY SSF52788 1 159 7.85E-36 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily ATC04_04925 d2528398a84d53785b941b1e951fd085 169 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 155 3.3E-30 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ATC04_04925 d2528398a84d53785b941b1e951fd085 169 SMART SM00226 2 158 1.4E-29 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ATC04_18085 f3ee27984546c0b346fb70df91134897 267 Pfam PF17409 MoaF C-terminal domain 151 262 2.8E-38 T 11-10-2018 IPR035348 MoaF, C-terminal domain ATC04_18085 f3ee27984546c0b346fb70df91134897 267 Pfam PF10703 MoaF N-terminal domain 15 123 1.2E-22 T 11-10-2018 IPR024724 Molybdenum cofactor biosynthesis protein F, N-terminal ATC04_16885 ddcb3bb1e1ed7d897281dea8a61dece8 115 PRINTS PR00340 P-II protein signature 23 41 3.0E-21 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATC04_16885 ddcb3bb1e1ed7d897281dea8a61dece8 115 PRINTS PR00340 P-II protein signature 86 106 3.0E-21 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATC04_16885 ddcb3bb1e1ed7d897281dea8a61dece8 115 PRINTS PR00340 P-II protein signature 2 17 3.0E-21 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATC04_16885 ddcb3bb1e1ed7d897281dea8a61dece8 115 SUPERFAMILY SSF54913 1 115 5.4E-36 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta ATC04_16885 ddcb3bb1e1ed7d897281dea8a61dece8 115 Pfam PF00543 Nitrogen regulatory protein P-II 4 108 2.6E-33 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATC04_16885 ddcb3bb1e1ed7d897281dea8a61dece8 115 SMART SM00938 4 108 5.8E-48 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATC04_16885 ddcb3bb1e1ed7d897281dea8a61dece8 115 Gene3D G3DSA:3.30.70.120 1 115 3.6E-39 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ATC04_15010 b395a79c41d1e27b817024aa259f97cb 250 Pfam PF01476 LysM domain 202 248 4.5E-10 T 11-10-2018 IPR018392 LysM domain ATC04_15010 b395a79c41d1e27b817024aa259f97cb 250 Gene3D G3DSA:3.10.350.10 200 247 1.0E-12 T 11-10-2018 IPR036779 LysM domain superfamily ATC04_15010 b395a79c41d1e27b817024aa259f97cb 250 Gene3D G3DSA:1.10.530.10 8 114 6.6E-36 T 11-10-2018 ATC04_15010 b395a79c41d1e27b817024aa259f97cb 250 Pfam PF06737 Transglycosylase-like domain 36 107 2.2E-31 T 11-10-2018 IPR010618 Transglycosylase-like ATC04_15010 b395a79c41d1e27b817024aa259f97cb 250 SMART SM00257 201 248 1.5E-7 T 11-10-2018 IPR018392 LysM domain ATC04_15010 b395a79c41d1e27b817024aa259f97cb 250 SUPERFAMILY SSF53955 36 113 1.16E-30 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ATC04_15010 b395a79c41d1e27b817024aa259f97cb 250 SUPERFAMILY SSF54106 201 248 1.83E-7 T 11-10-2018 ATC04_17810 47e3ac2fdf8fca909d29cc8c191b09db 214 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 183 3.4E-17 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ATC04_17810 47e3ac2fdf8fca909d29cc8c191b09db 214 SUPERFAMILY SSF52540 1 208 1.39E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_17810 47e3ac2fdf8fca909d29cc8c191b09db 214 PIRSF PIRSF009320 1 212 2.0E-45 T 11-10-2018 ATC04_17810 47e3ac2fdf8fca909d29cc8c191b09db 214 Gene3D G3DSA:3.40.50.300 1 208 1.1E-51 T 11-10-2018 ATC04_18245 47e3ac2fdf8fca909d29cc8c191b09db 214 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 183 3.4E-17 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ATC04_18245 47e3ac2fdf8fca909d29cc8c191b09db 214 SUPERFAMILY SSF52540 1 208 1.39E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_18245 47e3ac2fdf8fca909d29cc8c191b09db 214 PIRSF PIRSF009320 1 212 2.0E-45 T 11-10-2018 ATC04_18245 47e3ac2fdf8fca909d29cc8c191b09db 214 Gene3D G3DSA:3.40.50.300 1 208 1.1E-51 T 11-10-2018 ATC04_05490 fdb6d1ee99906dc4ea8c806ba7775b3b 473 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 246 470 2.9E-68 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ATC04_05490 fdb6d1ee99906dc4ea8c806ba7775b3b 473 Gene3D G3DSA:2.40.50.100 2 83 1.5E-17 T 11-10-2018 ATC04_05490 fdb6d1ee99906dc4ea8c806ba7775b3b 473 Pfam PF00364 Biotin-requiring enzyme 5 74 2.2E-14 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ATC04_05490 fdb6d1ee99906dc4ea8c806ba7775b3b 473 Gene3D G3DSA:3.30.559.10 222 471 1.5E-71 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ATC04_05490 fdb6d1ee99906dc4ea8c806ba7775b3b 473 SUPERFAMILY SSF51230 3 94 3.93E-21 T 11-10-2018 IPR011053 Single hybrid motif ATC04_05490 fdb6d1ee99906dc4ea8c806ba7775b3b 473 SUPERFAMILY SSF47005 155 198 2.35E-10 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ATC04_05490 fdb6d1ee99906dc4ea8c806ba7775b3b 473 Gene3D G3DSA:4.10.320.10 145 200 1.7E-13 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ATC04_05490 fdb6d1ee99906dc4ea8c806ba7775b3b 473 SUPERFAMILY SSF52777 247 467 8.45E-66 T 11-10-2018 ATC04_05490 fdb6d1ee99906dc4ea8c806ba7775b3b 473 Pfam PF02817 e3 binding domain 162 193 1.3E-11 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ATC04_08965 5661846064e57ffccf8695981ffd4b67 1149 Pfam PF14579 Helix-hairpin-helix motif 824 929 6.3E-15 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_08965 5661846064e57ffccf8695981ffd4b67 1149 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 1057 1.4E-150 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_08965 5661846064e57ffccf8695981ffd4b67 1149 Pfam PF02811 PHP domain 5 171 5.4E-15 T 11-10-2018 IPR004013 PHP domain GO:0003824 ATC04_08965 5661846064e57ffccf8695981ffd4b67 1149 SMART SM00481 4 71 5.5E-9 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal ATC04_08965 5661846064e57ffccf8695981ffd4b67 1149 Gene3D G3DSA:1.10.10.1600 440 518 2.0E-7 T 11-10-2018 ATC04_08965 5661846064e57ffccf8695981ffd4b67 1149 SUPERFAMILY SSF89550 11 72 7.26E-5 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ATC04_08965 5661846064e57ffccf8695981ffd4b67 1149 Gene3D G3DSA:3.20.20.140 1 275 7.7E-55 T 11-10-2018 ATC04_08965 5661846064e57ffccf8695981ffd4b67 1149 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 307 736 1.1E-117 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_00050 96bf0ed915043d839f19a1ed5ed4ac75 485 Gene3D G3DSA:3.90.1530.30 9 69 2.9E-12 T 11-10-2018 ATC04_00050 96bf0ed915043d839f19a1ed5ed4ac75 485 Pfam PF02195 ParB-like nuclease domain 2 76 1.1E-13 T 11-10-2018 IPR003115 ParB/Sulfiredoxin ATC04_00050 96bf0ed915043d839f19a1ed5ed4ac75 485 SMART SM00470 1 82 2.1E-6 T 11-10-2018 IPR003115 ParB/Sulfiredoxin ATC04_00050 96bf0ed915043d839f19a1ed5ed4ac75 485 SUPERFAMILY SSF110849 2 77 8.2E-15 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily ATC04_17680 96bf0ed915043d839f19a1ed5ed4ac75 485 Gene3D G3DSA:3.90.1530.30 9 69 2.9E-12 T 11-10-2018 ATC04_17680 96bf0ed915043d839f19a1ed5ed4ac75 485 Pfam PF02195 ParB-like nuclease domain 2 76 1.1E-13 T 11-10-2018 IPR003115 ParB/Sulfiredoxin ATC04_17680 96bf0ed915043d839f19a1ed5ed4ac75 485 SMART SM00470 1 82 2.1E-6 T 11-10-2018 IPR003115 ParB/Sulfiredoxin ATC04_17680 96bf0ed915043d839f19a1ed5ed4ac75 485 SUPERFAMILY SSF110849 2 77 8.2E-15 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 SUPERFAMILY SSF52540 172 481 1.29E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 344 3.0E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 Gene3D G3DSA:1.10.8.60 356 490 8.4E-44 T 11-10-2018 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 SUPERFAMILY SSF81923 3 144 7.85E-33 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 Gene3D G3DSA:1.10.8.60 724 822 1.7E-32 T 11-10-2018 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 SMART SM00382 546 696 3.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 SMART SM00382 209 353 6.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 Pfam PF02151 UvrB/uvrC motif 426 458 1.7E-5 T 11-10-2018 IPR001943 UVR domain GO:0005515 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 580 598 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 Gene3D G3DSA:3.40.50.300 498 722 2.6E-88 T 11-10-2018 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 Gene3D G3DSA:3.40.50.300 163 352 5.6E-72 T 11-10-2018 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 Pfam PF07724 AAA domain (Cdc48 subfamily) 546 718 5.2E-54 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 SUPERFAMILY SSF52540 495 807 1.27E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 Gene3D G3DSA:4.10.860.10 418 476 8.4E-44 T 11-10-2018 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 550 568 3.4E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 595 613 3.4E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 657 671 3.4E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 624 642 3.4E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 Gene3D G3DSA:1.10.1780.10 1 149 4.3E-63 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 68 5.9E-18 T 11-10-2018 IPR004176 Clp, N-terminal ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 142 1.2E-16 T 11-10-2018 IPR004176 Clp, N-terminal ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 SMART SM01086 724 817 1.3E-39 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ATC04_00130 35f9f29ac6ffe6df36c55569bcda2d22 837 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 724 804 8.8E-28 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ATC04_01965 656d9347359e8a86748062ea669cc5ad 67 SMART SM00357 3 67 1.6E-27 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ATC04_01965 656d9347359e8a86748062ea669cc5ad 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site ATC04_01965 656d9347359e8a86748062ea669cc5ad 67 SUPERFAMILY SSF50249 1 65 8.78E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_01965 656d9347359e8a86748062ea669cc5ad 67 PRINTS PR00050 Cold shock protein signature 40 58 5.6E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_01965 656d9347359e8a86748062ea669cc5ad 67 PRINTS PR00050 Cold shock protein signature 4 19 5.6E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_01965 656d9347359e8a86748062ea669cc5ad 67 PRINTS PR00050 Cold shock protein signature 25 34 5.6E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_01965 656d9347359e8a86748062ea669cc5ad 67 Gene3D G3DSA:2.40.50.140 1 66 3.2E-28 T 11-10-2018 ATC04_01965 656d9347359e8a86748062ea669cc5ad 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.6E-29 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_01965 656d9347359e8a86748062ea669cc5ad 67 PIRSF PIRSF002599 1 67 2.8E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 ATC04_08885 9fb4ba982e8a053cca172f0ec04d38bf 67 SUPERFAMILY SSF50249 1 65 5.57E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_08885 9fb4ba982e8a053cca172f0ec04d38bf 67 SMART SM00357 3 67 9.9E-29 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ATC04_08885 9fb4ba982e8a053cca172f0ec04d38bf 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.7E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_08885 9fb4ba982e8a053cca172f0ec04d38bf 67 Gene3D G3DSA:2.40.50.140 1 66 9.7E-30 T 11-10-2018 ATC04_08885 9fb4ba982e8a053cca172f0ec04d38bf 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site ATC04_08885 9fb4ba982e8a053cca172f0ec04d38bf 67 PRINTS PR00050 Cold shock protein signature 25 34 5.5E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_08885 9fb4ba982e8a053cca172f0ec04d38bf 67 PRINTS PR00050 Cold shock protein signature 4 19 5.5E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_08885 9fb4ba982e8a053cca172f0ec04d38bf 67 PRINTS PR00050 Cold shock protein signature 40 58 5.5E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_08885 9fb4ba982e8a053cca172f0ec04d38bf 67 PIRSF PIRSF002599 1 67 1.5E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 ATC04_12495 6b69e0b77399b63c505324f126550dff 322 Gene3D G3DSA:3.40.50.720 123 266 6.0E-104 T 11-10-2018 ATC04_12495 6b69e0b77399b63c505324f126550dff 322 Gene3D G3DSA:3.90.180.10 17 319 6.0E-104 T 11-10-2018 ATC04_12495 6b69e0b77399b63c505324f126550dff 322 SUPERFAMILY SSF50129 4 144 2.74E-36 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_12495 6b69e0b77399b63c505324f126550dff 322 SUPERFAMILY SSF51735 111 277 2.13E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_12495 6b69e0b77399b63c505324f126550dff 322 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 ATC04_12495 6b69e0b77399b63c505324f126550dff 322 SMART SM00829 12 320 4.7E-16 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATC04_12495 6b69e0b77399b63c505324f126550dff 322 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 130 2.0E-11 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATC04_12495 6b69e0b77399b63c505324f126550dff 322 Pfam PF00107 Zinc-binding dehydrogenase 151 251 1.2E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATC04_01550 1036f4e8947fd10a29260dcf093ebeab 316 PIRSF PIRSF015689 1 309 6.2E-128 T 11-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 ATC04_01550 1036f4e8947fd10a29260dcf093ebeab 316 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 1 112 6.0E-11 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ATC04_01550 1036f4e8947fd10a29260dcf093ebeab 316 SMART SM00859 1 116 1.7E-6 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ATC04_01550 1036f4e8947fd10a29260dcf093ebeab 316 SUPERFAMILY SSF55347 124 278 1.77E-60 T 11-10-2018 ATC04_01550 1036f4e8947fd10a29260dcf093ebeab 316 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 124 278 3.2E-59 T 11-10-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 ATC04_01550 1036f4e8947fd10a29260dcf093ebeab 316 Gene3D G3DSA:3.30.360.10 124 292 4.6E-125 T 11-10-2018 ATC04_01550 1036f4e8947fd10a29260dcf093ebeab 316 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 1 302 5.5E-135 T 11-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 ATC04_01550 1036f4e8947fd10a29260dcf093ebeab 316 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 316 135.304 T 11-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 ATC04_01550 1036f4e8947fd10a29260dcf093ebeab 316 SUPERFAMILY SSF51735 1 148 1.97E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01550 1036f4e8947fd10a29260dcf093ebeab 316 Gene3D G3DSA:3.40.50.720 1 299 4.6E-125 T 11-10-2018 ATC04_06290 9dfcdb25d66f31cdd8f0f6cc69be835b 376 Pfam PF13692 Glycosyl transferases group 1 206 334 5.7E-20 T 11-10-2018 ATC04_06290 9dfcdb25d66f31cdd8f0f6cc69be835b 376 Pfam PF13439 Glycosyltransferase Family 4 31 191 7.6E-14 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ATC04_06290 9dfcdb25d66f31cdd8f0f6cc69be835b 376 Gene3D G3DSA:3.40.50.2000 186 348 4.2E-37 T 11-10-2018 ATC04_06290 9dfcdb25d66f31cdd8f0f6cc69be835b 376 Gene3D G3DSA:3.40.50.2000 7 176 4.2E-22 T 11-10-2018 ATC04_06290 9dfcdb25d66f31cdd8f0f6cc69be835b 376 SUPERFAMILY SSF53756 23 366 2.26E-52 T 11-10-2018 ATC04_14130 f21a746ba120341e4ea616c031581d3e 311 Pfam PF01026 TatD related DNase 52 308 1.9E-64 T 11-10-2018 IPR001130 TatD family GO:0016788 ATC04_14130 f21a746ba120341e4ea616c031581d3e 311 Gene3D G3DSA:3.20.20.140 46 310 2.0E-72 T 11-10-2018 ATC04_14130 f21a746ba120341e4ea616c031581d3e 311 PIRSF PIRSF005902 35 311 1.4E-73 T 11-10-2018 IPR001130 TatD family GO:0016788 ATC04_14130 f21a746ba120341e4ea616c031581d3e 311 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 51 308 8.6E-67 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 ATC04_14130 f21a746ba120341e4ea616c031581d3e 311 SUPERFAMILY SSF51556 51 309 2.13E-70 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_04615 cc9f2b0a9b8b7017a407862bdde938a8 342 Pfam PF14518 Iron-containing redox enzyme 139 314 2.3E-45 T 11-10-2018 ATC04_04615 cc9f2b0a9b8b7017a407862bdde938a8 342 Gene3D G3DSA:1.20.910.10 110 322 8.7E-30 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_04615 cc9f2b0a9b8b7017a407862bdde938a8 342 SMART SM01236 171 276 3.5E-38 T 11-10-2018 ATC04_04615 cc9f2b0a9b8b7017a407862bdde938a8 342 SUPERFAMILY SSF48613 133 312 2.89E-11 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_12920 1fe97909dd8caf7d9277350ee1046992 452 Gene3D G3DSA:1.20.1250.20 24 219 1.7E-31 T 11-10-2018 ATC04_12920 1fe97909dd8caf7d9277350ee1046992 452 SUPERFAMILY SSF103473 17 445 2.62E-60 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_12920 1fe97909dd8caf7d9277350ee1046992 452 Gene3D G3DSA:1.20.1250.20 240 448 7.5E-20 T 11-10-2018 ATC04_12920 1fe97909dd8caf7d9277350ee1046992 452 Pfam PF07690 Major Facilitator Superfamily 38 400 2.3E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_11860 064750881f2741f8e932e09bad28342e 473 Gene3D G3DSA:3.20.20.10 60 328 4.0E-155 T 11-10-2018 IPR029066 PLP-binding barrel ATC04_11860 064750881f2741f8e932e09bad28342e 473 Gene3D G3DSA:2.40.37.10 39 467 4.0E-155 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ATC04_11860 064750881f2741f8e932e09bad28342e 473 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 268 281 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ATC04_11860 064750881f2741f8e932e09bad28342e 473 SUPERFAMILY SSF50621 304 470 1.03E-44 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ATC04_11860 064750881f2741f8e932e09bad28342e 473 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 41 471 36.946 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_11860 064750881f2741f8e932e09bad28342e 473 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 89 107 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ATC04_11860 064750881f2741f8e932e09bad28342e 473 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 89 107 2.5E-13 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATC04_11860 064750881f2741f8e932e09bad28342e 473 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 428 441 2.5E-13 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATC04_11860 064750881f2741f8e932e09bad28342e 473 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 229 242 2.5E-13 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATC04_11860 064750881f2741f8e932e09bad28342e 473 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 109 121 2.5E-13 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATC04_11860 064750881f2741f8e932e09bad28342e 473 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 318 337 2.5E-13 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATC04_11860 064750881f2741f8e932e09bad28342e 473 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 353 428 2.2E-13 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 ATC04_11860 064750881f2741f8e932e09bad28342e 473 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 78 327 6.5E-53 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 ATC04_11860 064750881f2741f8e932e09bad28342e 473 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 33 470 2.1E-128 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_11860 064750881f2741f8e932e09bad28342e 473 PRINTS PR01181 Diaminopimelate decarboxylase signature 107 124 7.1E-25 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_11860 064750881f2741f8e932e09bad28342e 473 PRINTS PR01181 Diaminopimelate decarboxylase signature 355 373 7.1E-25 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_11860 064750881f2741f8e932e09bad28342e 473 PRINTS PR01181 Diaminopimelate decarboxylase signature 438 460 7.1E-25 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_11860 064750881f2741f8e932e09bad28342e 473 PRINTS PR01181 Diaminopimelate decarboxylase signature 196 205 7.1E-25 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_11860 064750881f2741f8e932e09bad28342e 473 SUPERFAMILY SSF51419 52 330 2.76E-67 T 11-10-2018 IPR029066 PLP-binding barrel ATC04_11940 9a52463be8816abf242166723de63647 439 SUPERFAMILY SSF54631 208 348 4.04E-27 T 11-10-2018 ATC04_11940 9a52463be8816abf242166723de63647 439 SMART SM01091 352 432 4.9E-19 T 11-10-2018 IPR005170 Transporter-associated domain ATC04_11940 9a52463be8816abf242166723de63647 439 SUPERFAMILY SSF56176 350 438 7.36E-17 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ATC04_11940 9a52463be8816abf242166723de63647 439 Pfam PF00571 CBS domain 284 337 3.4E-6 T 11-10-2018 IPR000644 CBS domain ATC04_11940 9a52463be8816abf242166723de63647 439 Gene3D G3DSA:3.10.580.10 197 344 6.8E-47 T 11-10-2018 ATC04_11940 9a52463be8816abf242166723de63647 439 Gene3D G3DSA:3.30.465.10 345 430 1.8E-17 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ATC04_11940 9a52463be8816abf242166723de63647 439 Pfam PF01595 Domain of unknown function DUF21 10 199 1.3E-35 T 11-10-2018 IPR002550 CNNM, transmembrane domain ATC04_11940 9a52463be8816abf242166723de63647 439 Pfam PF03471 Transporter associated domain 354 430 5.4E-16 T 11-10-2018 IPR005170 Transporter-associated domain ATC04_07860 b2c3ad6d09464ad846895cd8cfd185fb 346 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 106 8.5E-17 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ATC04_07860 b2c3ad6d09464ad846895cd8cfd185fb 346 Gene3D G3DSA:3.40.430.10 242 344 1.2E-14 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_07860 b2c3ad6d09464ad846895cd8cfd185fb 346 Gene3D G3DSA:3.40.430.10 147 241 1.1E-30 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_07860 b2c3ad6d09464ad846895cd8cfd185fb 346 PIRSF PIRSF006769 236 342 3.8E-13 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 ATC04_07860 b2c3ad6d09464ad846895cd8cfd185fb 346 PIRSF PIRSF006769 2 251 1.5E-78 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 ATC04_07860 b2c3ad6d09464ad846895cd8cfd185fb 346 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 95 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ATC04_07860 b2c3ad6d09464ad846895cd8cfd185fb 346 Gene3D G3DSA:3.40.140.10 2 146 3.3E-32 T 11-10-2018 ATC04_07860 b2c3ad6d09464ad846895cd8cfd185fb 346 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 14 338 1.7E-70 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 ATC04_07860 b2c3ad6d09464ad846895cd8cfd185fb 346 SUPERFAMILY SSF53927 10 149 1.59E-31 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ATC04_07860 b2c3ad6d09464ad846895cd8cfd185fb 346 Pfam PF01872 RibD C-terminal domain 152 305 1.3E-35 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ATC04_07860 b2c3ad6d09464ad846895cd8cfd185fb 346 SUPERFAMILY SSF53597 150 317 1.26E-41 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_06890 0a84389a4b69ea08f56f04ab8c960ec5 280 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 76 96 3.4E-24 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ATC04_06890 0a84389a4b69ea08f56f04ab8c960ec5 280 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 240 260 3.4E-24 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ATC04_06890 0a84389a4b69ea08f56f04ab8c960ec5 280 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 198 215 3.4E-24 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ATC04_06890 0a84389a4b69ea08f56f04ab8c960ec5 280 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 217 235 3.4E-24 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ATC04_06890 0a84389a4b69ea08f56f04ab8c960ec5 280 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 11 25 3.4E-24 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ATC04_06890 0a84389a4b69ea08f56f04ab8c960ec5 280 Pfam PF01555 DNA methylase 14 253 9.5E-49 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 ATC04_06890 0a84389a4b69ea08f56f04ab8c960ec5 280 SUPERFAMILY SSF53335 2 262 2.45E-64 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_06890 0a84389a4b69ea08f56f04ab8c960ec5 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 15 21 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ATC04_02705 b73f1e3500acdfa67cad8dd3bcf661e3 213 SMART SM00345 9 67 2.5E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_02705 b73f1e3500acdfa67cad8dd3bcf661e3 213 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 6.4E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_02705 b73f1e3500acdfa67cad8dd3bcf661e3 213 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 6.4E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_02705 b73f1e3500acdfa67cad8dd3bcf661e3 213 SUPERFAMILY SSF48008 73 208 6.54E-21 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_02705 b73f1e3500acdfa67cad8dd3bcf661e3 213 Pfam PF07729 FCD domain 77 201 7.7E-19 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_02705 b73f1e3500acdfa67cad8dd3bcf661e3 213 Gene3D G3DSA:1.20.120.530 71 211 5.6E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_02705 b73f1e3500acdfa67cad8dd3bcf661e3 213 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 67 1.2E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_02705 b73f1e3500acdfa67cad8dd3bcf661e3 213 SUPERFAMILY SSF46785 4 71 4.13E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_02705 b73f1e3500acdfa67cad8dd3bcf661e3 213 SMART SM00895 77 202 8.5E-13 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_02705 b73f1e3500acdfa67cad8dd3bcf661e3 213 Gene3D G3DSA:1.10.10.10 3 68 4.6E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_01125 0dfec06e8c9eaee5bfa70df61005a7d6 204 Gene3D G3DSA:1.10.260.40 4 80 1.3E-15 T 11-10-2018 ATC04_01125 0dfec06e8c9eaee5bfa70df61005a7d6 204 Gene3D G3DSA:2.60.120.10 104 196 8.0E-23 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_01125 0dfec06e8c9eaee5bfa70df61005a7d6 204 SUPERFAMILY SSF51182 63 188 2.13E-24 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ATC04_01125 0dfec06e8c9eaee5bfa70df61005a7d6 204 SMART SM00530 15 70 6.0E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_01125 0dfec06e8c9eaee5bfa70df61005a7d6 204 Pfam PF01381 Helix-turn-helix 16 67 4.0E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_01125 0dfec06e8c9eaee5bfa70df61005a7d6 204 Pfam PF07883 Cupin domain 116 184 4.7E-14 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ATC04_01125 0dfec06e8c9eaee5bfa70df61005a7d6 204 SUPERFAMILY SSF47413 9 73 1.39E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_00260 d1246d953bb411f8e7fff3a06e1dfed7 454 Gene3D G3DSA:3.40.710.10 258 449 1.5E-46 T 11-10-2018 ATC04_00260 d1246d953bb411f8e7fff3a06e1dfed7 454 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 405 418 2.4E-18 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ATC04_00260 d1246d953bb411f8e7fff3a06e1dfed7 454 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 341 355 2.4E-18 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ATC04_00260 d1246d953bb411f8e7fff3a06e1dfed7 454 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 273 295 2.4E-18 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ATC04_00260 d1246d953bb411f8e7fff3a06e1dfed7 454 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 326 340 2.4E-18 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ATC04_00260 d1246d953bb411f8e7fff3a06e1dfed7 454 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 109 128 2.4E-18 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ATC04_00260 d1246d953bb411f8e7fff3a06e1dfed7 454 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 240 427 9.9E-33 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ATC04_00260 d1246d953bb411f8e7fff3a06e1dfed7 454 SUPERFAMILY SSF56601 74 451 2.66E-54 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ATC04_00260 d1246d953bb411f8e7fff3a06e1dfed7 454 Gene3D G3DSA:3.40.710.10 69 204 4.5E-11 T 11-10-2018 ATC04_00260 d1246d953bb411f8e7fff3a06e1dfed7 454 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 240 431 3.3E-40 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ATC04_00260 d1246d953bb411f8e7fff3a06e1dfed7 454 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 71 230 1.1E-21 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ATC04_06975 eee0e84f1492e903d03aeec220d72b27 330 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_06975 eee0e84f1492e903d03aeec220d72b27 330 SUPERFAMILY SSF55021 251 326 3.2E-15 T 11-10-2018 ATC04_06975 eee0e84f1492e903d03aeec220d72b27 330 Gene3D G3DSA:3.40.50.300 1 249 1.8E-80 T 11-10-2018 ATC04_06975 eee0e84f1492e903d03aeec220d72b27 330 SUPERFAMILY SSF52540 1 236 2.92E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06975 eee0e84f1492e903d03aeec220d72b27 330 SMART SM00930 253 327 1.7E-19 T 11-10-2018 IPR018449 NIL domain ATC04_06975 eee0e84f1492e903d03aeec220d72b27 330 Gene3D G3DSA:3.30.70.260 250 329 1.8E-15 T 11-10-2018 ATC04_06975 eee0e84f1492e903d03aeec220d72b27 330 Pfam PF00005 ABC transporter 23 169 5.8E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_06975 eee0e84f1492e903d03aeec220d72b27 330 SMART SM00382 30 226 3.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_06975 eee0e84f1492e903d03aeec220d72b27 330 Pfam PF09383 NIL domain 256 326 5.6E-17 T 11-10-2018 IPR018449 NIL domain ATC04_03465 82961c9cce52c0305a4e6c17bad2b3a9 309 SUPERFAMILY SSF53850 93 299 8.83E-33 T 11-10-2018 ATC04_03465 82961c9cce52c0305a4e6c17bad2b3a9 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_03465 82961c9cce52c0305a4e6c17bad2b3a9 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_03465 82961c9cce52c0305a4e6c17bad2b3a9 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_03465 82961c9cce52c0305a4e6c17bad2b3a9 309 Gene3D G3DSA:1.10.10.10 2 86 7.4E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03465 82961c9cce52c0305a4e6c17bad2b3a9 309 Pfam PF03466 LysR substrate binding domain 92 295 2.1E-33 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_03465 82961c9cce52c0305a4e6c17bad2b3a9 309 Gene3D G3DSA:3.40.190.10 95 293 1.6E-46 T 11-10-2018 ATC04_03465 82961c9cce52c0305a4e6c17bad2b3a9 309 SUPERFAMILY SSF46785 4 111 4.59E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03465 82961c9cce52c0305a4e6c17bad2b3a9 309 Gene3D G3DSA:3.40.190.10 165 270 1.6E-46 T 11-10-2018 ATC04_03465 82961c9cce52c0305a4e6c17bad2b3a9 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.9E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_02385 50d6c93aa526937fbd452d47137c6aca 320 SMART SM00559 52 179 3.2E-34 T 11-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 ATC04_02385 50d6c93aa526937fbd452d47137c6aca 320 PIRSF PIRSF006493 1 320 8.7E-83 T 11-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type ATC04_02385 50d6c93aa526937fbd452d47137c6aca 320 Gene3D G3DSA:2.40.290.10 3 177 1.3E-18 T 11-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily ATC04_02385 50d6c93aa526937fbd452d47137c6aca 320 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 258 1.2E-79 T 11-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type ATC04_02385 50d6c93aa526937fbd452d47137c6aca 320 SUPERFAMILY SSF100939 1 258 5.1E-52 T 11-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily ATC04_02385 50d6c93aa526937fbd452d47137c6aca 320 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 188 1.5E-35 T 11-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 ATC04_02385 50d6c93aa526937fbd452d47137c6aca 320 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 258 30.904 T 11-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type ATC04_08305 b1adb766b40f614decbbcd1437587432 426 Pfam PF01458 Uncharacterized protein family (UPF0051) 175 396 2.0E-71 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 ATC04_08305 b1adb766b40f614decbbcd1437587432 426 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 146 413 1.0E-71 T 11-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 ATC04_08305 b1adb766b40f614decbbcd1437587432 426 SUPERFAMILY SSF101960 78 421 3.4E-86 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ATC04_09820 6c115fc63aabbacc454a5cbe34c7825d 147 SUPERFAMILY SSF54593 2 145 4.81E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_09820 6c115fc63aabbacc454a5cbe34c7825d 147 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 119 1.6E-8 T 11-10-2018 ATC04_09820 6c115fc63aabbacc454a5cbe34c7825d 147 Gene3D G3DSA:3.10.180.10 1 147 8.4E-44 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_09710 4726a7af0093b09f7955d228d730db89 421 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 225 243 1.1E-16 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ATC04_09710 4726a7af0093b09f7955d228d730db89 421 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 44 55 1.1E-16 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ATC04_09710 4726a7af0093b09f7955d228d730db89 421 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 256 277 1.1E-16 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ATC04_09710 4726a7af0093b09f7955d228d730db89 421 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 80 89 1.1E-16 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ATC04_09710 4726a7af0093b09f7955d228d730db89 421 Gene3D G3DSA:1.20.120.640 341 420 6.3E-18 T 11-10-2018 ATC04_09710 4726a7af0093b09f7955d228d730db89 421 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 39 348 9.8E-80 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 ATC04_09710 4726a7af0093b09f7955d228d730db89 421 SUPERFAMILY SSF52374 36 347 2.09E-65 T 11-10-2018 ATC04_09710 4726a7af0093b09f7955d228d730db89 421 TIGRFAM TIGR03447 mycothiol_MshC: cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase 2 420 6.0E-186 T 11-10-2018 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 ATC04_09710 4726a7af0093b09f7955d228d730db89 421 Hamap MF_01697 L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [mshC]. 6 420 52.01 T 11-10-2018 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 ATC04_09710 4726a7af0093b09f7955d228d730db89 421 Gene3D G3DSA:3.40.50.620 1 340 1.2E-91 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_06575 bc72752b2a9a321f14c2906651b04b1f 230 SMART SM00855 3 163 1.2E-21 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_06575 bc72752b2a9a321f14c2906651b04b1f 230 Gene3D G3DSA:3.40.50.1240 1 212 1.0E-47 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_06575 bc72752b2a9a321f14c2906651b04b1f 230 SUPERFAMILY SSF53254 1 202 1.22E-45 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_06575 bc72752b2a9a321f14c2906651b04b1f 230 TIGRFAM TIGR03848 MSMEG_4193: probable phosphomutase, MSMEG_4193 family 3 208 7.3E-93 T 11-10-2018 IPR022492 Phosphomutase MSMEG4193, putative ATC04_06575 bc72752b2a9a321f14c2906651b04b1f 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 201 1.3E-46 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_09450 cc83bc594cdf922dfb39990ca9246866 429 SMART SM01091 332 412 1.9E-19 T 11-10-2018 IPR005170 Transporter-associated domain ATC04_09450 cc83bc594cdf922dfb39990ca9246866 429 Pfam PF00571 CBS domain 199 255 4.3E-7 T 11-10-2018 IPR000644 CBS domain ATC04_09450 cc83bc594cdf922dfb39990ca9246866 429 Pfam PF00571 CBS domain 266 317 1.5E-6 T 11-10-2018 IPR000644 CBS domain ATC04_09450 cc83bc594cdf922dfb39990ca9246866 429 Pfam PF01595 Domain of unknown function DUF21 7 181 5.9E-19 T 11-10-2018 IPR002550 CNNM, transmembrane domain ATC04_09450 cc83bc594cdf922dfb39990ca9246866 429 Pfam PF03471 Transporter associated domain 333 411 1.0E-14 T 11-10-2018 IPR005170 Transporter-associated domain ATC04_09450 cc83bc594cdf922dfb39990ca9246866 429 Gene3D G3DSA:3.10.580.10 176 323 9.5E-53 T 11-10-2018 ATC04_09450 cc83bc594cdf922dfb39990ca9246866 429 SUPERFAMILY SSF54631 185 320 2.02E-31 T 11-10-2018 ATC04_09450 cc83bc594cdf922dfb39990ca9246866 429 SUPERFAMILY SSF56176 331 415 1.04E-13 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ATC04_09450 cc83bc594cdf922dfb39990ca9246866 429 SMART SM00116 269 317 1.1 T 11-10-2018 IPR000644 CBS domain ATC04_09450 cc83bc594cdf922dfb39990ca9246866 429 SMART SM00116 206 255 0.0042 T 11-10-2018 IPR000644 CBS domain ATC04_09450 cc83bc594cdf922dfb39990ca9246866 429 Gene3D G3DSA:3.30.465.10 324 412 4.0E-16 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ATC04_14530 918db7b2d20feb7161105b18f54a87c1 118 Gene3D G3DSA:3.10.180.10 3 118 5.5E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_14530 918db7b2d20feb7161105b18f54a87c1 118 SUPERFAMILY SSF54593 7 117 1.16E-12 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_14540 fb7a1aecfa20d966954877f3ede923bf 455 Gene3D G3DSA:1.20.1250.20 5 439 1.2E-61 T 11-10-2018 ATC04_14540 fb7a1aecfa20d966954877f3ede923bf 455 Pfam PF07690 Major Facilitator Superfamily 278 421 7.2E-10 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_14540 fb7a1aecfa20d966954877f3ede923bf 455 SUPERFAMILY SSF103473 1 422 1.44E-64 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_14540 fb7a1aecfa20d966954877f3ede923bf 455 Pfam PF00083 Sugar (and other) transporter 8 212 4.7E-21 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_10080 65a4a313d4391a1e982fede30160b543 891 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 826 842 2.0E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10080 65a4a313d4391a1e982fede30160b543 891 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 812 826 2.0E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10080 65a4a313d4391a1e982fede30160b543 891 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 842 854 2.0E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10080 65a4a313d4391a1e982fede30160b543 891 Gene3D G3DSA:3.40.50.300 14 165 4.2E-5 T 11-10-2018 ATC04_10080 65a4a313d4391a1e982fede30160b543 891 SUPERFAMILY SSF46894 804 864 4.76E-13 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_10080 65a4a313d4391a1e982fede30160b543 891 SMART SM00421 809 866 2.9E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10080 65a4a313d4391a1e982fede30160b543 891 Gene3D G3DSA:1.10.10.10 740 873 6.4E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_10080 65a4a313d4391a1e982fede30160b543 891 SUPERFAMILY SSF52540 15 205 9.46E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10080 65a4a313d4391a1e982fede30160b543 891 ProSitePatterns PS00622 LuxR-type HTH domain signature. 826 853 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10080 65a4a313d4391a1e982fede30160b543 891 Pfam PF00196 Bacterial regulatory proteins, luxR family 811 863 1.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_01985 4036895ef3d3aca50f24cdb6cf7fa9dd 512 Gene3D G3DSA:1.10.4160.10 29 497 4.2E-110 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily ATC04_01985 4036895ef3d3aca50f24cdb6cf7fa9dd 512 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 46 480 2.9E-79 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 ATC04_01090 cb48670c5c2f11db23aef7826d6e0b40 229 Gene3D G3DSA:1.10.357.10 8 227 1.2E-51 T 11-10-2018 ATC04_01090 cb48670c5c2f11db23aef7826d6e0b40 229 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 84 219 1.0E-8 T 11-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 ATC04_01090 cb48670c5c2f11db23aef7826d6e0b40 229 SUPERFAMILY SSF48498 85 223 8.78E-15 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_01090 cb48670c5c2f11db23aef7826d6e0b40 229 PRINTS PR00400 Tetracycline repressor protein signature 203 217 1.7E-7 T 11-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 ATC04_01090 cb48670c5c2f11db23aef7826d6e0b40 229 PRINTS PR00400 Tetracycline repressor protein signature 34 57 1.7E-7 T 11-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 ATC04_01090 cb48670c5c2f11db23aef7826d6e0b40 229 PRINTS PR00400 Tetracycline repressor protein signature 86 105 1.7E-7 T 11-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 ATC04_01090 cb48670c5c2f11db23aef7826d6e0b40 229 SUPERFAMILY SSF46689 13 80 1.95E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_01090 cb48670c5c2f11db23aef7826d6e0b40 229 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 66 1.1E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01090 cb48670c5c2f11db23aef7826d6e0b40 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 7.7E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01090 cb48670c5c2f11db23aef7826d6e0b40 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 7.7E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_07925 1052d7683205e14c63ad3a30a8b7755e 444 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 25 411 1.2E-181 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATC04_07925 1052d7683205e14c63ad3a30a8b7755e 444 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 71 399 4.6E-43 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ATC04_07925 1052d7683205e14c63ad3a30a8b7755e 444 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 99 113 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATC04_07925 1052d7683205e14c63ad3a30a8b7755e 444 Gene3D G3DSA:3.40.50.1100 71 408 4.0E-180 T 11-10-2018 ATC04_07925 1052d7683205e14c63ad3a30a8b7755e 444 PIRSF PIRSF001413 11 420 4.8E-154 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATC04_07925 1052d7683205e14c63ad3a30a8b7755e 444 SUPERFAMILY SSF53686 23 413 2.75E-138 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATC04_07925 1052d7683205e14c63ad3a30a8b7755e 444 Gene3D G3DSA:3.40.50.1100 27 224 4.0E-180 T 11-10-2018 ATC04_07925 1052d7683205e14c63ad3a30a8b7755e 444 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 18 415 49.584 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATC04_00480 cc395f9a272e968575d7625a5938427b 143 PRINTS PR01438 Universal stress protein signature 2 20 3.6E-17 T 11-10-2018 IPR006015 Universal stress protein A ATC04_00480 cc395f9a272e968575d7625a5938427b 143 PRINTS PR01438 Universal stress protein signature 118 140 3.6E-17 T 11-10-2018 IPR006015 Universal stress protein A ATC04_00480 cc395f9a272e968575d7625a5938427b 143 PRINTS PR01438 Universal stress protein signature 101 113 3.6E-17 T 11-10-2018 IPR006015 Universal stress protein A ATC04_00480 cc395f9a272e968575d7625a5938427b 143 SUPERFAMILY SSF52402 4 141 1.84E-30 T 11-10-2018 ATC04_00480 cc395f9a272e968575d7625a5938427b 143 Gene3D G3DSA:3.40.50.620 1 143 1.1E-31 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_00480 cc395f9a272e968575d7625a5938427b 143 Pfam PF00582 Universal stress protein family 1 140 1.0E-29 T 11-10-2018 IPR006016 UspA ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 Gene3D G3DSA:3.40.50.720 1 134 1.3E-45 T 11-10-2018 ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 Pfam PF02629 CoA binding domain 6 103 9.1E-24 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 Pfam PF00549 CoA-ligase 163 280 1.2E-14 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 PRINTS PR01798 Succinyl-CoA synthase signature 217 230 1.0E-33 T 11-10-2018 ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 PRINTS PR01798 Succinyl-CoA synthase signature 186 204 1.0E-33 T 11-10-2018 ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 PRINTS PR01798 Succinyl-CoA synthase signature 249 266 1.0E-33 T 11-10-2018 ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 PRINTS PR01798 Succinyl-CoA synthase signature 86 103 1.0E-33 T 11-10-2018 ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 296 4.1E-124 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 Gene3D G3DSA:3.40.50.261 135 298 4.8E-62 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 SUPERFAMILY SSF52210 134 295 1.96E-47 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 PIRSF PIRSF001553 1 300 6.5E-115 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 163 190 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 245 258 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 297 39.179 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 SUPERFAMILY SSF51735 1 118 8.0E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_15220 a8a38ea6bf0f8f506591b3d923c6b3d2 300 SMART SM00881 4 104 2.2E-29 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ATC04_01460 9cc61470499c9a5f9ed0ef93fe08fd25 383 ProSitePatterns PS00737 Thiolases signature 2. 329 345 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ATC04_01460 9cc61470499c9a5f9ed0ef93fe08fd25 383 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 381 1.9E-127 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_01460 9cc61470499c9a5f9ed0ef93fe08fd25 383 SUPERFAMILY SSF53901 3 260 2.36E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_01460 9cc61470499c9a5f9ed0ef93fe08fd25 383 Gene3D G3DSA:3.40.47.10 6 266 1.1E-135 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_01460 9cc61470499c9a5f9ed0ef93fe08fd25 383 Gene3D G3DSA:3.40.47.10 127 380 1.1E-135 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_01460 9cc61470499c9a5f9ed0ef93fe08fd25 383 PIRSF PIRSF000429 1 383 2.5E-120 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_01460 9cc61470499c9a5f9ed0ef93fe08fd25 383 SUPERFAMILY SSF53901 261 382 1.52E-43 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_01460 9cc61470499c9a5f9ed0ef93fe08fd25 383 Pfam PF00108 Thiolase, N-terminal domain 5 252 9.6E-61 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ATC04_01460 9cc61470499c9a5f9ed0ef93fe08fd25 383 Pfam PF02803 Thiolase, C-terminal domain 261 382 1.1E-43 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ATC04_01025 43359073f2d64e4682e7ab44bbfc8815 353 SMART SM00354 18 88 1.5E-23 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATC04_01025 43359073f2d64e4682e7ab44bbfc8815 353 SUPERFAMILY SSF47413 18 76 5.98E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_01025 43359073f2d64e4682e7ab44bbfc8815 353 Gene3D G3DSA:1.10.260.40 13 75 1.8E-22 T 11-10-2018 ATC04_01025 43359073f2d64e4682e7ab44bbfc8815 353 Gene3D G3DSA:3.40.50.2300 180 310 2.8E-70 T 11-10-2018 ATC04_01025 43359073f2d64e4682e7ab44bbfc8815 353 Pfam PF13377 Periplasmic binding protein-like domain 189 347 1.0E-30 T 11-10-2018 ATC04_01025 43359073f2d64e4682e7ab44bbfc8815 353 Gene3D G3DSA:3.40.50.2300 95 335 2.8E-70 T 11-10-2018 ATC04_01025 43359073f2d64e4682e7ab44bbfc8815 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 21 65 4.5E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATC04_01025 43359073f2d64e4682e7ab44bbfc8815 353 ProSitePatterns PS00356 LacI-type HTH domain signature. 21 39 - T 11-10-2018 ATC04_01025 43359073f2d64e4682e7ab44bbfc8815 353 SUPERFAMILY SSF53822 95 351 1.85E-55 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ATC04_08215 4feac3cae353f0f652c699f394419432 271 ProSitePatterns PS00171 Triosephosphate isomerase active site. 180 190 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08215 4feac3cae353f0f652c699f394419432 271 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 14 256 4.3E-54 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08215 4feac3cae353f0f652c699f394419432 271 Gene3D G3DSA:3.20.20.70 9 270 2.8E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_08215 4feac3cae353f0f652c699f394419432 271 SUPERFAMILY SSF51351 10 264 6.02E-88 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08215 4feac3cae353f0f652c699f394419432 271 Pfam PF00121 Triosephosphate isomerase 14 262 1.2E-86 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08215 4feac3cae353f0f652c699f394419432 271 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 11 264 59.138 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_03410 aeead6f96cddbba30098bb9e6a59077a 562 Pfam PF00501 AMP-binding enzyme 36 464 1.2E-99 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_03410 aeead6f96cddbba30098bb9e6a59077a 562 Gene3D G3DSA:3.40.50.12780 17 459 1.7E-114 T 11-10-2018 ATC04_03410 aeead6f96cddbba30098bb9e6a59077a 562 Gene3D G3DSA:3.30.300.30 460 558 6.1E-28 T 11-10-2018 ATC04_03410 aeead6f96cddbba30098bb9e6a59077a 562 SUPERFAMILY SSF56801 24 558 2.75E-146 T 11-10-2018 ATC04_03410 aeead6f96cddbba30098bb9e6a59077a 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 214 225 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_03410 aeead6f96cddbba30098bb9e6a59077a 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 473 548 1.9E-15 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ATC04_02205 c3dbc3552f51b6ab3955efaeee011a74 472 SMART SM00382 42 241 3.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_02205 c3dbc3552f51b6ab3955efaeee011a74 472 SMART SM00382 301 469 3.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_02205 c3dbc3552f51b6ab3955efaeee011a74 472 Pfam PF00005 ABC transporter 294 420 4.0E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_02205 c3dbc3552f51b6ab3955efaeee011a74 472 Gene3D G3DSA:3.40.50.300 265 472 5.1E-45 T 11-10-2018 ATC04_02205 c3dbc3552f51b6ab3955efaeee011a74 472 SUPERFAMILY SSF52540 18 242 1.82E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_02205 c3dbc3552f51b6ab3955efaeee011a74 472 Pfam PF00005 ABC transporter 33 192 4.3E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_02205 c3dbc3552f51b6ab3955efaeee011a74 472 SUPERFAMILY SSF52540 270 467 6.56E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_02205 c3dbc3552f51b6ab3955efaeee011a74 472 Gene3D G3DSA:3.40.50.300 17 264 4.3E-47 T 11-10-2018 ATC04_08760 4a401a1166e738428a6d3213f1f9f6fa 293 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_08760 4a401a1166e738428a6d3213f1f9f6fa 293 Pfam PF00106 short chain dehydrogenase 14 208 3.3E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08760 4a401a1166e738428a6d3213f1f9f6fa 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08760 4a401a1166e738428a6d3213f1f9f6fa 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 1.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08760 4a401a1166e738428a6d3213f1f9f6fa 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08760 4a401a1166e738428a6d3213f1f9f6fa 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08760 4a401a1166e738428a6d3213f1f9f6fa 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08760 4a401a1166e738428a6d3213f1f9f6fa 293 SUPERFAMILY SSF51735 9 264 5.29E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_08760 4a401a1166e738428a6d3213f1f9f6fa 293 Gene3D G3DSA:3.40.50.720 1 267 1.8E-56 T 11-10-2018 ATC04_08760 4a401a1166e738428a6d3213f1f9f6fa 293 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 224 0.0039 T 11-10-2018 ATC04_08760 4a401a1166e738428a6d3213f1f9f6fa 293 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 1.1E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08760 4a401a1166e738428a6d3213f1f9f6fa 293 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 1.1E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08760 4a401a1166e738428a6d3213f1f9f6fa 293 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 1.1E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_11325 a07c050769d81512647b994c2242351c 533 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 24 525 1.0E-70 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATC04_11325 a07c050769d81512647b994c2242351c 533 Gene3D G3DSA:3.30.300.30 119 216 2.2E-8 T 11-10-2018 ATC04_11325 a07c050769d81512647b994c2242351c 533 PRINTS PR01009 Flagellar M-ring protein signature 117 135 1.6E-18 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATC04_11325 a07c050769d81512647b994c2242351c 533 PRINTS PR01009 Flagellar M-ring protein signature 192 210 1.6E-18 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATC04_11325 a07c050769d81512647b994c2242351c 533 PRINTS PR01009 Flagellar M-ring protein signature 330 354 1.6E-18 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATC04_11325 a07c050769d81512647b994c2242351c 533 PRINTS PR01009 Flagellar M-ring protein signature 149 163 1.6E-18 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATC04_11325 a07c050769d81512647b994c2242351c 533 PRINTS PR01009 Flagellar M-ring protein signature 258 276 1.6E-18 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATC04_11325 a07c050769d81512647b994c2242351c 533 PIRSF PIRSF004862 1 531 2.7E-113 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATC04_11325 a07c050769d81512647b994c2242351c 533 Pfam PF08345 Flagellar M-ring protein C-terminal 245 394 1.3E-23 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal ATC04_11325 a07c050769d81512647b994c2242351c 533 Pfam PF01514 Secretory protein of YscJ/FliF family 27 216 1.7E-65 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF ATC04_03960 9976f56dcaadd1ed4ba84b0047d7404b 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 2.8E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03960 9976f56dcaadd1ed4ba84b0047d7404b 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 2.8E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03960 9976f56dcaadd1ed4ba84b0047d7404b 224 SMART SM00895 92 214 3.7E-21 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_03960 9976f56dcaadd1ed4ba84b0047d7404b 224 SUPERFAMILY SSF46785 4 70 4.87E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03960 9976f56dcaadd1ed4ba84b0047d7404b 224 Pfam PF07729 FCD domain 92 212 1.1E-24 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_03960 9976f56dcaadd1ed4ba84b0047d7404b 224 SMART SM00345 7 66 2.2E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03960 9976f56dcaadd1ed4ba84b0047d7404b 224 Gene3D G3DSA:1.10.10.10 2 70 7.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03960 9976f56dcaadd1ed4ba84b0047d7404b 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 66 1.6E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03960 9976f56dcaadd1ed4ba84b0047d7404b 224 Gene3D G3DSA:1.20.120.530 88 224 2.5E-30 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_03960 9976f56dcaadd1ed4ba84b0047d7404b 224 SUPERFAMILY SSF48008 89 221 1.36E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_03575 4579dfe83b68d156fc076fec64a571f5 139 Pfam PF14081 Domain of unknown function (DUF4262) 17 86 8.3E-12 T 11-10-2018 IPR025358 Protein of unknown function DUF4262 ATC04_03375 66cca5f765882b7f4f4c1ca6fc8fe229 126 Pfam PF05899 Protein of unknown function (DUF861) 52 123 1.3E-8 T 11-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 ATC04_03375 66cca5f765882b7f4f4c1ca6fc8fe229 126 Gene3D G3DSA:2.60.120.10 12 126 5.3E-22 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_03375 66cca5f765882b7f4f4c1ca6fc8fe229 126 SUPERFAMILY SSF51182 54 124 9.98E-6 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ATC04_07885 3734b0c3be1356fe03b7b7d73e9b825f 282 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 194 281 3.3E-29 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ATC04_07885 3734b0c3be1356fe03b7b7d73e9b825f 282 Gene3D G3DSA:3.30.70.120 210 276 2.7E-26 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ATC04_07885 3734b0c3be1356fe03b7b7d73e9b825f 282 Pfam PF01634 ATP phosphoribosyltransferase 49 201 1.6E-41 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ATC04_07885 3734b0c3be1356fe03b7b7d73e9b825f 282 SUPERFAMILY SSF53850 1 208 2.81E-58 T 11-10-2018 ATC04_07885 3734b0c3be1356fe03b7b7d73e9b825f 282 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 184 8.3E-51 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ATC04_07885 3734b0c3be1356fe03b7b7d73e9b825f 282 Gene3D G3DSA:3.40.190.10 2 185 3.4E-52 T 11-10-2018 ATC04_07885 3734b0c3be1356fe03b7b7d73e9b825f 282 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 143 164 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 ATC04_07885 3734b0c3be1356fe03b7b7d73e9b825f 282 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 1 282 30.901 T 11-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 ATC04_07885 3734b0c3be1356fe03b7b7d73e9b825f 282 Pfam PF08029 HisG, C-terminal domain 207 278 6.8E-27 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ATC04_07885 3734b0c3be1356fe03b7b7d73e9b825f 282 SUPERFAMILY SSF54913 209 281 5.0E-22 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta ATC04_07885 3734b0c3be1356fe03b7b7d73e9b825f 282 Gene3D G3DSA:3.40.190.10 93 180 3.4E-52 T 11-10-2018 ATC04_00305 3561f483297500597e62598703f28ffe 276 Gene3D G3DSA:3.30.1240.10 101 199 8.0E-52 T 11-10-2018 ATC04_00305 3561f483297500597e62598703f28ffe 276 ProSitePatterns PS01229 Hypothetical cof family signature 2. 224 246 - T 11-10-2018 ATC04_00305 3561f483297500597e62598703f28ffe 276 SUPERFAMILY SSF56784 17 274 3.22E-53 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_00305 3561f483297500597e62598703f28ffe 276 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 156 166 1.1E-5 T 11-10-2018 ATC04_00305 3561f483297500597e62598703f28ffe 276 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 21 35 1.1E-5 T 11-10-2018 ATC04_00305 3561f483297500597e62598703f28ffe 276 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 247 259 1.1E-5 T 11-10-2018 ATC04_00305 3561f483297500597e62598703f28ffe 276 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 224 243 1.1E-5 T 11-10-2018 ATC04_00305 3561f483297500597e62598703f28ffe 276 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 19 243 2.2E-17 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ATC04_00305 3561f483297500597e62598703f28ffe 276 Pfam PF08282 haloacid dehalogenase-like hydrolase 20 270 2.9E-45 T 11-10-2018 ATC04_00305 3561f483297500597e62598703f28ffe 276 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 19 270 1.5E-41 T 11-10-2018 IPR000150 Cof family GO:0016787 ATC04_00305 3561f483297500597e62598703f28ffe 276 Gene3D G3DSA:3.40.50.1000 19 271 8.0E-52 T 11-10-2018 IPR023214 HAD superfamily ATC04_12940 a783bf2407cca0f0992264f35f1c9de8 266 Gene3D G3DSA:3.40.50.720 1 264 2.1E-47 T 11-10-2018 ATC04_12940 a783bf2407cca0f0992264f35f1c9de8 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 159 253 3.5E-22 T 11-10-2018 ATC04_12940 a783bf2407cca0f0992264f35f1c9de8 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 5.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_12940 a783bf2407cca0f0992264f35f1c9de8 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_12940 a783bf2407cca0f0992264f35f1c9de8 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 5.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_12940 a783bf2407cca0f0992264f35f1c9de8 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 108 124 5.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_12940 a783bf2407cca0f0992264f35f1c9de8 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 5.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_12940 a783bf2407cca0f0992264f35f1c9de8 266 SUPERFAMILY SSF51735 8 256 5.57E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_12940 a783bf2407cca0f0992264f35f1c9de8 266 Pfam PF00106 short chain dehydrogenase 8 124 4.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_06120 a6a2e8d7f313b90a246deb1e32871f45 279 SUPERFAMILY SSF50249 3 126 1.71E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_06120 a6a2e8d7f313b90a246deb1e32871f45 279 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 8.2E-53 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ATC04_06120 a6a2e8d7f313b90a246deb1e32871f45 279 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 3.5E-33 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06120 a6a2e8d7f313b90a246deb1e32871f45 279 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.917 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 ATC04_06120 a6a2e8d7f313b90a246deb1e32871f45 279 Gene3D G3DSA:4.10.950.10 197 274 4.1E-29 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06120 a6a2e8d7f313b90a246deb1e32871f45 279 SUPERFAMILY SSF50104 127 271 7.82E-54 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily ATC04_06120 a6a2e8d7f313b90a246deb1e32871f45 279 SMART SM01382 125 253 5.3E-85 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ATC04_06120 a6a2e8d7f313b90a246deb1e32871f45 279 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06120 a6a2e8d7f313b90a246deb1e32871f45 279 PIRSF PIRSF002158 4 275 2.2E-92 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06120 a6a2e8d7f313b90a246deb1e32871f45 279 Gene3D G3DSA:2.40.50.140 1 115 2.7E-47 T 11-10-2018 ATC04_06120 a6a2e8d7f313b90a246deb1e32871f45 279 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 3.9E-125 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 ATC04_06120 a6a2e8d7f313b90a246deb1e32871f45 279 Gene3D G3DSA:2.30.30.30 119 196 3.1E-31 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 ATC04_06120 a6a2e8d7f313b90a246deb1e32871f45 279 SMART SM01383 42 119 6.3E-40 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_01735 83c0a99598be67416ddb0667212d1b02 98 TIGRFAM TIGR01374 soxD: sarcosine oxidase, delta subunit family 3 86 3.1E-40 T 11-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 ATC04_01735 83c0a99598be67416ddb0667212d1b02 98 Pfam PF04267 Sarcosine oxidase, delta subunit family 3 83 1.3E-36 T 11-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 ATC04_01735 83c0a99598be67416ddb0667212d1b02 98 Gene3D G3DSA:3.30.2270.10 1 98 7.7E-43 T 11-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 ATC04_00280 3b678dfabf8bd9fd95e55a688e38fce0 206 PIRSF PIRSF015592 1 204 1.6E-48 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 ATC04_00280 3b678dfabf8bd9fd95e55a688e38fce0 206 Gene3D G3DSA:3.40.630.20 1 199 4.7E-56 T 11-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 ATC04_00280 3b678dfabf8bd9fd95e55a688e38fce0 206 Pfam PF01470 Pyroglutamyl peptidase 1 163 1.1E-41 T 11-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 ATC04_00280 3b678dfabf8bd9fd95e55a688e38fce0 206 SUPERFAMILY SSF53182 1 167 3.53E-50 T 11-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 ATC04_00280 3b678dfabf8bd9fd95e55a688e38fce0 206 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 130 146 2.7E-28 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 ATC04_00280 3b678dfabf8bd9fd95e55a688e38fce0 206 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 60 72 2.7E-28 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 ATC04_00280 3b678dfabf8bd9fd95e55a688e38fce0 206 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 2.7E-28 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 ATC04_00280 3b678dfabf8bd9fd95e55a688e38fce0 206 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 78 98 2.7E-28 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 ATC04_14125 6695c28d9b1d85360391ceb00148545e 392 Pfam PF03990 Domain of unknown function (DUF348) 36 74 3.5E-11 T 11-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 ATC04_14125 6695c28d9b1d85360391ceb00148545e 392 Pfam PF03990 Domain of unknown function (DUF348) 149 186 7.8E-10 T 11-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 ATC04_14125 6695c28d9b1d85360391ceb00148545e 392 Gene3D G3DSA:2.20.230.10 195 291 3.4E-18 T 11-10-2018 ATC04_14125 6695c28d9b1d85360391ceb00148545e 392 Pfam PF06737 Transglycosylase-like domain 311 385 4.9E-32 T 11-10-2018 IPR010618 Transglycosylase-like ATC04_14125 6695c28d9b1d85360391ceb00148545e 392 Gene3D G3DSA:1.10.530.10 312 392 5.1E-34 T 11-10-2018 ATC04_14125 6695c28d9b1d85360391ceb00148545e 392 SUPERFAMILY SSF53955 312 391 1.3E-32 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ATC04_14125 6695c28d9b1d85360391ceb00148545e 392 SMART SM01208 212 290 4.6E-21 T 11-10-2018 IPR011098 G5 domain ATC04_14125 6695c28d9b1d85360391ceb00148545e 392 Pfam PF07501 G5 domain 218 289 1.4E-18 T 11-10-2018 IPR011098 G5 domain ATC04_01690 d02aca0e2d0ffc928c2fb49ee9e095d7 447 ProSitePatterns PS00216 Sugar transport proteins signature 1. 314 331 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_01690 d02aca0e2d0ffc928c2fb49ee9e095d7 447 SUPERFAMILY SSF103473 31 440 1.44E-72 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_01690 d02aca0e2d0ffc928c2fb49ee9e095d7 447 Gene3D G3DSA:1.20.1250.20 31 447 4.7E-70 T 11-10-2018 ATC04_01690 d02aca0e2d0ffc928c2fb49ee9e095d7 447 Pfam PF07690 Major Facilitator Superfamily 40 297 2.4E-26 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_08185 d075f213122b09ef8a7dbd721f155b08 297 PIRSF PIRSF005052 13 297 1.1E-100 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 ATC04_08185 d075f213122b09ef8a7dbd721f155b08 297 Pfam PF03668 P-loop ATPase protein family 14 297 4.6E-98 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 ATC04_08185 d075f213122b09ef8a7dbd721f155b08 297 SUPERFAMILY SSF52540 12 168 1.01E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08185 d075f213122b09ef8a7dbd721f155b08 297 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 13 296 38.508 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 ATC04_08185 d075f213122b09ef8a7dbd721f155b08 297 Gene3D G3DSA:3.40.50.300 55 170 7.4E-7 T 11-10-2018 ATC04_05640 499a76e8cc097f1b8e885d1230365ddd 278 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 18 105 4.2E-14 T 11-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family ATC04_05640 499a76e8cc097f1b8e885d1230365ddd 278 Pfam PF03374 Phage antirepressor protein KilAC domain 138 248 4.3E-12 T 11-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 ATC04_01620 208a7169653e228e1c419fbae8393d25 302 Pfam PF00480 ROK family 1 294 3.1E-56 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ATC04_01620 208a7169653e228e1c419fbae8393d25 302 Gene3D G3DSA:3.30.420.40 1 291 1.5E-71 T 11-10-2018 ATC04_01620 208a7169653e228e1c419fbae8393d25 302 Gene3D G3DSA:3.30.420.40 122 278 1.5E-71 T 11-10-2018 ATC04_01620 208a7169653e228e1c419fbae8393d25 302 SUPERFAMILY SSF53067 1 295 4.28E-51 T 11-10-2018 ATC04_05210 831aea953984df656db9cc8ec0673718 929 Gene3D G3DSA:2.70.20.10 204 501 2.9E-169 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ATC04_05210 831aea953984df656db9cc8ec0673718 929 SUPERFAMILY SSF56712 11 595 2.35E-176 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain ATC04_05210 831aea953984df656db9cc8ec0673718 929 Pfam PF01131 DNA topoisomerase 148 591 2.7E-121 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ATC04_05210 831aea953984df656db9cc8ec0673718 929 Pfam PF13368 Topoisomerase C-terminal repeat 840 892 4.5E-17 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat ATC04_05210 831aea953984df656db9cc8ec0673718 929 Pfam PF13368 Topoisomerase C-terminal repeat 777 828 5.0E-16 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat ATC04_05210 831aea953984df656db9cc8ec0673718 929 Pfam PF13368 Topoisomerase C-terminal repeat 627 680 5.2E-6 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat ATC04_05210 831aea953984df656db9cc8ec0673718 929 Pfam PF13368 Topoisomerase C-terminal repeat 689 773 5.1E-13 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat ATC04_05210 831aea953984df656db9cc8ec0673718 929 Gene3D G3DSA:1.10.460.10 155 594 2.9E-169 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ATC04_05210 831aea953984df656db9cc8ec0673718 929 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 324 333 4.0E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ATC04_05210 831aea953984df656db9cc8ec0673718 929 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 4.0E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ATC04_05210 831aea953984df656db9cc8ec0673718 929 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 403 419 4.0E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ATC04_05210 831aea953984df656db9cc8ec0673718 929 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 517 531 4.0E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ATC04_05210 831aea953984df656db9cc8ec0673718 929 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 182 200 4.0E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ATC04_05210 831aea953984df656db9cc8ec0673718 929 SMART SM00436 124 212 1.2E-42 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 ATC04_05210 831aea953984df656db9cc8ec0673718 929 Gene3D G3DSA:3.40.50.140 10 154 1.3E-55 T 11-10-2018 ATC04_05210 831aea953984df656db9cc8ec0673718 929 SMART SM00437 282 554 1.4E-111 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 ATC04_05210 831aea953984df656db9cc8ec0673718 929 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 13 643 6.9E-234 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 ATC04_05210 831aea953984df656db9cc8ec0673718 929 SMART SM00493 11 124 3.3E-34 T 11-10-2018 IPR006171 TOPRIM domain ATC04_05210 831aea953984df656db9cc8ec0673718 929 Hamap MF_00952 DNA topoisomerase 1 [topA]. 11 795 53.17 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 ATC04_05210 831aea953984df656db9cc8ec0673718 929 Pfam PF01751 Toprim domain 13 133 3.6E-29 T 11-10-2018 IPR006171 TOPRIM domain ATC04_05210 831aea953984df656db9cc8ec0673718 929 Gene3D G3DSA:1.10.290.10 290 418 2.9E-169 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 ATC04_05210 831aea953984df656db9cc8ec0673718 929 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 319 333 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 ATC04_08745 38dd0a428c94fff4fb083bfdfcc550de 467 Gene3D G3DSA:1.20.1740.10 14 464 1.0E-63 T 11-10-2018 ATC04_08745 38dd0a428c94fff4fb083bfdfcc550de 467 PIRSF PIRSF006060 1 459 7.3E-68 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_08745 38dd0a428c94fff4fb083bfdfcc550de 467 Pfam PF00324 Amino acid permease 22 453 3.1E-95 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ATC04_08745 38dd0a428c94fff4fb083bfdfcc550de 467 ProSitePatterns PS00218 Amino acid permeases signature. 46 76 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ATC04_03965 5986877469a8187e09932bb58b6348d9 302 SUPERFAMILY SSF53613 1 289 1.71E-53 T 11-10-2018 IPR029056 Ribokinase-like ATC04_03965 5986877469a8187e09932bb58b6348d9 302 Pfam PF00294 pfkB family carbohydrate kinase 20 288 7.7E-34 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ATC04_03965 5986877469a8187e09932bb58b6348d9 302 Gene3D G3DSA:3.40.1190.20 2 301 4.2E-65 T 11-10-2018 IPR029056 Ribokinase-like ATC04_03965 5986877469a8187e09932bb58b6348d9 302 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 229 242 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ATC04_03965 5986877469a8187e09932bb58b6348d9 302 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 22 46 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ATC04_06375 f8793c534dc0c0a38c4b9a0159116361 478 Gene3D G3DSA:1.20.1740.10 1 452 2.8E-60 T 11-10-2018 ATC04_06375 f8793c534dc0c0a38c4b9a0159116361 478 Pfam PF00324 Amino acid permease 1 447 9.7E-132 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ATC04_06375 f8793c534dc0c0a38c4b9a0159116361 478 PIRSF PIRSF006060 1 469 5.4E-74 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_06375 f8793c534dc0c0a38c4b9a0159116361 478 ProSitePatterns PS00218 Amino acid permeases signature. 23 54 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 Pfam PF00009 Elongation factor Tu GTP binding domain 19 195 1.5E-52 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 SUPERFAMILY SSF54980 305 384 2.16E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 Gene3D G3DSA:3.30.70.2570 493 567 1.1E-32 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 SUPERFAMILY SSF54980 412 507 6.23E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 Gene3D G3DSA:3.30.70.3380 382 491 1.5E-38 T 11-10-2018 ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 21 190 9.9E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 SUPERFAMILY SSF52540 13 217 2.06E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 SUPERFAMILY SSF50447 196 291 1.36E-16 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 Gene3D G3DSA:3.30.70.870 300 381 2.7E-32 T 11-10-2018 ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 SMART SM00838 414 499 3.7E-4 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 Gene3D G3DSA:2.40.30.10 200 299 3.6E-32 T 11-10-2018 ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 Gene3D G3DSA:3.40.50.300 15 199 1.2E-71 T 11-10-2018 ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 PRINTS PR00315 GTP-binding elongation factor signature 88 98 4.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 PRINTS PR00315 GTP-binding elongation factor signature 140 149 4.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 PRINTS PR00315 GTP-binding elongation factor signature 104 115 4.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 PRINTS PR00315 GTP-binding elongation factor signature 21 34 4.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 PRINTS PR00315 GTP-binding elongation factor signature 64 72 4.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 Hamap MF_00071 Elongation factor 4 [lepA]. 1 611 278.114 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 Pfam PF00679 Elongation factor G C-terminus 412 498 2.2E-21 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 Pfam PF06421 GTP-binding protein LepA C-terminus 502 606 2.3E-48 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal ATC04_09400 a294906bfc3433a7cc90342e2cbf8be8 614 TIGRFAM TIGR01393 lepA: elongation factor 4 19 609 1.1E-288 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 ATC04_00660 0e4687aa585dbfa13e911275640b3be8 125 SMART SM01234 19 86 1.5E-38 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ATC04_00660 0e4687aa585dbfa13e911275640b3be8 125 Pfam PF01809 Haemolytic domain 21 86 2.7E-27 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ATC04_00660 0e4687aa585dbfa13e911275640b3be8 125 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 19 87 23.293 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ATC04_00660 0e4687aa585dbfa13e911275640b3be8 125 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 34 86 1.0E-17 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ATC04_00660 0e4687aa585dbfa13e911275640b3be8 125 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 23 88 1.8E-25 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ATC04_00975 fa90f1c5a75843846e91326780b8a70d 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 180 0.0046 T 11-10-2018 ATC04_00975 fa90f1c5a75843846e91326780b8a70d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.6E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00975 fa90f1c5a75843846e91326780b8a70d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.6E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00975 fa90f1c5a75843846e91326780b8a70d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.6E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00975 fa90f1c5a75843846e91326780b8a70d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.6E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00975 fa90f1c5a75843846e91326780b8a70d 254 Pfam PF00106 short chain dehydrogenase 13 198 5.7E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00975 fa90f1c5a75843846e91326780b8a70d 254 SUPERFAMILY SSF51735 12 238 1.06E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_00975 fa90f1c5a75843846e91326780b8a70d 254 Gene3D G3DSA:3.40.50.720 5 249 1.2E-60 T 11-10-2018 ATC04_00975 fa90f1c5a75843846e91326780b8a70d 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 9.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00975 fa90f1c5a75843846e91326780b8a70d 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 9.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00975 fa90f1c5a75843846e91326780b8a70d 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 9.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_05430 65eed15ec6d9bb6eb0fcc81b22f3b914 472 Gene3D G3DSA:1.10.3720.10 259 472 4.6E-57 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_05430 65eed15ec6d9bb6eb0fcc81b22f3b914 472 SMART SM00062 30 251 2.3E-63 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ATC04_05430 65eed15ec6d9bb6eb0fcc81b22f3b914 472 SUPERFAMILY SSF53850 9 250 3.14E-64 T 11-10-2018 ATC04_05430 65eed15ec6d9bb6eb0fcc81b22f3b914 472 SMART SM00079 30 250 6.0E-5 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 ATC04_05430 65eed15ec6d9bb6eb0fcc81b22f3b914 472 Gene3D G3DSA:3.40.190.10 114 209 2.4E-73 T 11-10-2018 ATC04_05430 65eed15ec6d9bb6eb0fcc81b22f3b914 472 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 290 471 1.4E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_05430 65eed15ec6d9bb6eb0fcc81b22f3b914 472 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 267 365 3.4E-27 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ATC04_05430 65eed15ec6d9bb6eb0fcc81b22f3b914 472 SUPERFAMILY SSF161098 268 456 1.83E-46 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_05430 65eed15ec6d9bb6eb0fcc81b22f3b914 472 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 248 8.3E-59 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ATC04_05430 65eed15ec6d9bb6eb0fcc81b22f3b914 472 Gene3D G3DSA:3.40.190.10 34 247 2.4E-73 T 11-10-2018 ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 SUPERFAMILY SSF53223 6 195 7.04E-74 T 11-10-2018 ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 Gene3D G3DSA:3.40.50.10860 53 188 1.7E-161 T 11-10-2018 ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 Gene3D G3DSA:1.10.285.10 400 447 6.8E-9 T 11-10-2018 ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 SUPERFAMILY SSF51735 201 446 3.1E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 Gene3D G3DSA:3.40.50.720 208 372 1.7E-161 T 11-10-2018 ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 Gene3D G3DSA:1.10.285.10 7 383 1.7E-161 T 11-10-2018 ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 445 3.0E-81 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 SMART SM00839 203 445 1.5E-79 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 PIRSF PIRSF000185 20 447 5.9E-114 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 112 126 2.4E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 371 382 2.4E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 2.4E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 2.4E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ATC04_05255 885d62958d31c27e7be6d78804b0391c 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 55 183 7.8E-49 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ATC04_09500 ce3f54450521659ead77beaedfae1fce 124 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 20 124 7.0E-34 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 ATC04_09500 ce3f54450521659ead77beaedfae1fce 124 Gene3D G3DSA:2.60.300.12 19 124 2.8E-28 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ATC04_09500 ce3f54450521659ead77beaedfae1fce 124 SUPERFAMILY SSF89360 18 111 7.65E-27 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ATC04_09500 ce3f54450521659ead77beaedfae1fce 124 Pfam PF01521 Iron-sulphur cluster biosynthesis 20 121 1.3E-17 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 ATC04_17265 7cca078080fda06ac35d2ffd52f7d613 217 SUPERFAMILY SSF48008 79 211 8.11E-21 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_17265 7cca078080fda06ac35d2ffd52f7d613 217 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 72 7.3E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_17265 7cca078080fda06ac35d2ffd52f7d613 217 Pfam PF07729 FCD domain 82 203 1.0E-15 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_17265 7cca078080fda06ac35d2ffd52f7d613 217 SMART SM00345 14 72 2.2E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_17265 7cca078080fda06ac35d2ffd52f7d613 217 SMART SM00895 82 204 1.2E-11 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_17265 7cca078080fda06ac35d2ffd52f7d613 217 SUPERFAMILY SSF46785 9 97 3.04E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_17265 7cca078080fda06ac35d2ffd52f7d613 217 Gene3D G3DSA:1.20.120.530 76 215 1.0E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_17265 7cca078080fda06ac35d2ffd52f7d613 217 Gene3D G3DSA:1.10.10.10 9 74 4.6E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03700 77cbb2f5764c66e015701d2b4994bb7c 380 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 127 145 2.9E-11 T 11-10-2018 ATC04_03700 77cbb2f5764c66e015701d2b4994bb7c 380 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 254 2.9E-11 T 11-10-2018 ATC04_03700 77cbb2f5764c66e015701d2b4994bb7c 380 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.9E-11 T 11-10-2018 ATC04_03700 77cbb2f5764c66e015701d2b4994bb7c 380 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 206 222 2.9E-11 T 11-10-2018 ATC04_03700 77cbb2f5764c66e015701d2b4994bb7c 380 SUPERFAMILY SSF51905 3 281 1.26E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03700 77cbb2f5764c66e015701d2b4994bb7c 380 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 264 7.4E-39 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_03700 77cbb2f5764c66e015701d2b4994bb7c 380 Gene3D G3DSA:3.50.50.60 6 279 6.9E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03700 77cbb2f5764c66e015701d2b4994bb7c 380 Gene3D G3DSA:3.50.50.60 94 213 6.9E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03700 77cbb2f5764c66e015701d2b4994bb7c 380 Pfam PF14759 Reductase C-terminal 291 370 9.7E-14 T 11-10-2018 IPR028202 Reductase, C-terminal ATC04_03700 77cbb2f5764c66e015701d2b4994bb7c 380 Gene3D G3DSA:3.30.390.30 287 378 1.2E-12 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_03700 77cbb2f5764c66e015701d2b4994bb7c 380 SUPERFAMILY SSF55424 284 375 1.92E-13 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_02465 e8c80357b6ac67bbe54691ee8806c8db 413 Gene3D G3DSA:1.10.3290.10 90 307 3.3E-39 T 11-10-2018 IPR036597 Fido-like domain superfamily ATC04_02465 e8c80357b6ac67bbe54691ee8806c8db 413 Pfam PF02661 Fic/DOC family 151 256 4.7E-20 T 11-10-2018 IPR003812 Fido domain ATC04_02465 e8c80357b6ac67bbe54691ee8806c8db 413 SUPERFAMILY SSF140931 138 306 8.89E-31 T 11-10-2018 IPR036597 Fido-like domain superfamily ATC04_08635 a697ba1262347b17644e737a6816e1e4 207 Pfam PF07884 Vitamin K epoxide reductase family 27 158 3.3E-27 T 11-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 ATC04_08635 a697ba1262347b17644e737a6816e1e4 207 SMART SM00756 20 162 1.7E-43 T 11-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 ATC04_08635 a697ba1262347b17644e737a6816e1e4 207 Gene3D G3DSA:1.20.1440.130 14 170 1.7E-14 T 11-10-2018 IPR038354 VKOR domain superfamily Reactome: R-HSA-6806664 ATC04_15155 4feb0820838066512449c261c01331c6 554 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 15 185 2.2E-48 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ATC04_15155 4feb0820838066512449c261c01331c6 554 SUPERFAMILY SSF52518 13 190 1.03E-41 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_15155 4feb0820838066512449c261c01331c6 554 Gene3D G3DSA:3.40.50.970 378 549 9.6E-39 T 11-10-2018 ATC04_15155 4feb0820838066512449c261c01331c6 554 SUPERFAMILY SSF52467 169 352 4.7E-35 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ATC04_15155 4feb0820838066512449c261c01331c6 554 SUPERFAMILY SSF52518 381 546 8.25E-36 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_15155 4feb0820838066512449c261c01331c6 554 Gene3D G3DSA:3.40.50.970 6 191 9.9E-49 T 11-10-2018 ATC04_15155 4feb0820838066512449c261c01331c6 554 Gene3D G3DSA:3.40.50.1220 200 375 3.7E-41 T 11-10-2018 ATC04_15155 4feb0820838066512449c261c01331c6 554 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 205 334 1.3E-29 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ATC04_15155 4feb0820838066512449c261c01331c6 554 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 405 542 1.2E-26 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ATC04_13415 d15efa04378e1b7e94d37f3b111397dd 783 Gene3D G3DSA:1.10.274.90 178 306 2.7E-37 T 11-10-2018 ATC04_13415 d15efa04378e1b7e94d37f3b111397dd 783 Pfam PF04183 IucA / IucC family 324 580 1.7E-77 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 ATC04_13415 d15efa04378e1b7e94d37f3b111397dd 783 Pfam PF13523 Acetyltransferase (GNAT) domain 11 152 2.0E-36 T 11-10-2018 ATC04_13415 d15efa04378e1b7e94d37f3b111397dd 783 SUPERFAMILY SSF55729 1 170 6.51E-30 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_13415 d15efa04378e1b7e94d37f3b111397dd 783 Gene3D G3DSA:3.40.630.30 1 177 1.8E-37 T 11-10-2018 ATC04_13415 d15efa04378e1b7e94d37f3b111397dd 783 Gene3D G3DSA:1.10.510.40 569 773 7.2E-62 T 11-10-2018 ATC04_13415 d15efa04378e1b7e94d37f3b111397dd 783 Pfam PF06276 Ferric iron reductase FhuF-like transporter 601 755 7.9E-32 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain ATC04_13415 d15efa04378e1b7e94d37f3b111397dd 783 SMART SM01006 6 54 9.2E-8 T 11-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain ATC04_05190 4ec4d1e7db4460692b7cfbdb7d1a65e6 299 Gene3D G3DSA:3.30.70.100 3 96 1.1E-21 T 11-10-2018 ATC04_05190 4ec4d1e7db4460692b7cfbdb7d1a65e6 299 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 264 34.921 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 ATC04_05190 4ec4d1e7db4460692b7cfbdb7d1a65e6 299 SMART SM00450 118 225 7.0E-12 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_05190 4ec4d1e7db4460692b7cfbdb7d1a65e6 299 SUPERFAMILY SSF52821 115 221 1.3E-19 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_05190 4ec4d1e7db4460692b7cfbdb7d1a65e6 299 Pfam PF12368 Rhodanase C-terminal 230 294 5.9E-15 T 11-10-2018 IPR022111 Rhodanase, C-terminal ATC04_05190 4ec4d1e7db4460692b7cfbdb7d1a65e6 299 Gene3D G3DSA:3.40.250.10 109 254 2.0E-34 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_13430 90ef4d445fac43ba56f0b59162c7d389 123 Pfam PF06304 Protein of unknown function (DUF1048) 12 113 2.2E-24 T 11-10-2018 IPR008316 Uncharacterised conserved protein UCP029876 ATC04_13430 90ef4d445fac43ba56f0b59162c7d389 123 Gene3D G3DSA:1.10.1900.10 2 116 2.7E-34 T 11-10-2018 ATC04_13430 90ef4d445fac43ba56f0b59162c7d389 123 SUPERFAMILY SSF158560 4 113 2.62E-27 T 11-10-2018 ATC04_18380 87d23add79ef70f0af0114916e8d1e3c 250 SUPERFAMILY SSF51735 1 213 1.44E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_18380 87d23add79ef70f0af0114916e8d1e3c 250 Gene3D G3DSA:3.40.50.720 2 249 1.6E-32 T 11-10-2018 ATC04_18380 87d23add79ef70f0af0114916e8d1e3c 250 Pfam PF13460 NAD(P)H-binding 7 175 1.5E-12 T 11-10-2018 IPR016040 NAD(P)-binding domain ATC04_09330 ebc653c9ed0d1d1fe213f34cacfb5ca3 289 PRINTS PR00412 Epoxide hydrolase signature 102 115 1.5E-10 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_09330 ebc653c9ed0d1d1fe213f34cacfb5ca3 289 PRINTS PR00412 Epoxide hydrolase signature 56 71 1.5E-10 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_09330 ebc653c9ed0d1d1fe213f34cacfb5ca3 289 PRINTS PR00412 Epoxide hydrolase signature 228 244 1.5E-10 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_09330 ebc653c9ed0d1d1fe213f34cacfb5ca3 289 PRINTS PR00412 Epoxide hydrolase signature 261 283 1.5E-10 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_09330 ebc653c9ed0d1d1fe213f34cacfb5ca3 289 Gene3D G3DSA:3.40.50.1820 4 287 1.4E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_09330 ebc653c9ed0d1d1fe213f34cacfb5ca3 289 Pfam PF00561 alpha/beta hydrolase fold 33 272 8.2E-21 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_09330 ebc653c9ed0d1d1fe213f34cacfb5ca3 289 SUPERFAMILY SSF53474 22 285 1.82E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_09330 ebc653c9ed0d1d1fe213f34cacfb5ca3 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 2.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_09330 ebc653c9ed0d1d1fe213f34cacfb5ca3 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 230 244 2.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_09330 ebc653c9ed0d1d1fe213f34cacfb5ca3 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 2.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_05045 23955e2c2bf4c542f5c235efa52be0f7 507 SUPERFAMILY SSF53271 267 479 1.84E-69 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ATC04_05045 23955e2c2bf4c542f5c235efa52be0f7 507 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 22 472 46.015 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ATC04_05045 23955e2c2bf4c542f5c235efa52be0f7 507 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 23 473 6.9E-160 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ATC04_05045 23955e2c2bf4c542f5c235efa52be0f7 507 PIRSF PIRSF000485 19 486 2.2E-165 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ATC04_05045 23955e2c2bf4c542f5c235efa52be0f7 507 Pfam PF13522 Glutamine amidotransferase domain 82 226 8.2E-16 T 11-10-2018 ATC04_05045 23955e2c2bf4c542f5c235efa52be0f7 507 SUPERFAMILY SSF56235 23 284 1.89E-67 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ATC04_05045 23955e2c2bf4c542f5c235efa52be0f7 507 Gene3D G3DSA:3.40.50.2020 291 455 6.1E-153 T 11-10-2018 ATC04_05045 23955e2c2bf4c542f5c235efa52be0f7 507 Gene3D G3DSA:3.60.20.10 23 474 6.1E-153 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ATC04_05045 23955e2c2bf4c542f5c235efa52be0f7 507 Pfam PF00156 Phosphoribosyl transferase domain 296 402 6.8E-9 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ATC04_12575 7e767bf87add7b3f289be1159f6f8f1e 216 Gene3D G3DSA:3.30.110.10 64 159 1.2E-33 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 ATC04_12575 7e767bf87add7b3f289be1159f6f8f1e 216 SUPERFAMILY SSF54364 2 66 7.59E-25 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ATC04_12575 7e767bf87add7b3f289be1159f6f8f1e 216 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 157 3.0E-58 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ATC04_12575 7e767bf87add7b3f289be1159f6f8f1e 216 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 158 25.792 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ATC04_12575 7e767bf87add7b3f289be1159f6f8f1e 216 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 72 155 2.9E-32 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 ATC04_12575 7e767bf87add7b3f289be1159f6f8f1e 216 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 64 1.4E-26 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ATC04_12575 7e767bf87add7b3f289be1159f6f8f1e 216 SUPERFAMILY SSF55200 71 159 1.96E-29 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 ATC04_12575 7e767bf87add7b3f289be1159f6f8f1e 216 Gene3D G3DSA:3.10.20.80 1 63 2.1E-27 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 24 1132 12.25 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Pfam PF04565 RNA polymerase Rpb2, domain 3 432 500 3.7E-28 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Gene3D G3DSA:3.90.1110.10 176 367 0.0 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Gene3D G3DSA:3.90.1800.10 1041 1095 6.5E-11 T 11-10-2018 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 ProSitePatterns PS01166 RNA polymerases beta chain signature. 878 890 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Pfam PF04560 RNA polymerase Rpb2, domain 7 1056 1129 1.8E-27 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Gene3D G3DSA:2.40.50.100 640 714 0.0 T 11-10-2018 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Pfam PF00562 RNA polymerase Rpb2, domain 6 639 1054 1.7E-152 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 SUPERFAMILY SSF64484 23 1143 0.0 T 11-10-2018 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Gene3D G3DSA:2.40.270.10 27 1032 0.0 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 237 852 1.2E-298 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Pfam PF04563 RNA polymerase beta subunit 38 417 5.0E-24 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Pfam PF04561 RNA polymerase Rpb2, domain 2 171 373 7.3E-30 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Pfam PF10385 RNA polymerase beta subunit external 1 domain 510 578 2.5E-24 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Gene3D G3DSA:3.90.1100.10 29 639 0.0 T 11-10-2018 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Gene3D G3DSA:2.40.50.150 750 876 0.0 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06060 c58cf889691cefb9d2676cd158c3a67a 1168 Gene3D G3DSA:2.30.150.10 513 582 0.0 T 11-10-2018 ATC04_06860 41db33aea504f3aa2e8a827e5da5d586 368 Hamap MF_02040 Iron-sulfur cluster carrier protein. 97 352 33.125 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein ATC04_06860 41db33aea504f3aa2e8a827e5da5d586 368 Gene3D G3DSA:3.30.300.130 2 95 1.0E-18 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ATC04_06860 41db33aea504f3aa2e8a827e5da5d586 368 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 106 350 3.1E-85 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 ATC04_06860 41db33aea504f3aa2e8a827e5da5d586 368 Pfam PF01883 Iron-sulfur cluster assembly protein 5 75 3.1E-17 T 11-10-2018 IPR002744 MIP18 family-like ATC04_06860 41db33aea504f3aa2e8a827e5da5d586 368 SUPERFAMILY SSF117916 5 91 1.93E-20 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ATC04_06860 41db33aea504f3aa2e8a827e5da5d586 368 Gene3D G3DSA:3.40.50.300 100 350 5.5E-68 T 11-10-2018 ATC04_06860 41db33aea504f3aa2e8a827e5da5d586 368 SUPERFAMILY SSF52540 106 354 5.14E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12330 f22abfa4e6789df68117ab0d42f53984 638 Pfam PF00501 AMP-binding enzyme 63 512 3.6E-84 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_12330 f22abfa4e6789df68117ab0d42f53984 638 Gene3D G3DSA:3.30.300.30 508 634 1.0E-24 T 11-10-2018 ATC04_12330 f22abfa4e6789df68117ab0d42f53984 638 Pfam PF13193 AMP-binding enzyme C-terminal domain 522 600 5.6E-24 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ATC04_12330 f22abfa4e6789df68117ab0d42f53984 638 SUPERFAMILY SSF56801 5 630 9.03E-153 T 11-10-2018 ATC04_12330 f22abfa4e6789df68117ab0d42f53984 638 ProSitePatterns PS00455 Putative AMP-binding domain signature. 248 259 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_12330 f22abfa4e6789df68117ab0d42f53984 638 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 5 59 2.5E-14 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 ATC04_12330 f22abfa4e6789df68117ab0d42f53984 638 Gene3D G3DSA:3.40.50.12780 33 505 1.3E-99 T 11-10-2018 ATC04_12235 c52bfa98cc2d28497cc5cc2565138393 150 SMART SM00240 73 123 3.7E-12 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ATC04_12235 c52bfa98cc2d28497cc5cc2565138393 150 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 59 145 1.8E-19 T 11-10-2018 IPR032030 YscD, cytoplasmic domain ATC04_12235 c52bfa98cc2d28497cc5cc2565138393 150 Gene3D G3DSA:2.60.200.20 29 147 3.9E-32 T 11-10-2018 ATC04_12235 c52bfa98cc2d28497cc5cc2565138393 150 SUPERFAMILY SSF49879 36 144 2.3E-29 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ATC04_10070 1e90136b79ddd2b8abfe7e7fbbf474f1 328 Gene3D G3DSA:3.40.50.720 129 269 4.9E-78 T 11-10-2018 ATC04_10070 1e90136b79ddd2b8abfe7e7fbbf474f1 328 Gene3D G3DSA:3.90.180.10 9 317 4.9E-78 T 11-10-2018 ATC04_10070 1e90136b79ddd2b8abfe7e7fbbf474f1 328 Pfam PF13602 Zinc-binding dehydrogenase 187 318 2.8E-15 T 11-10-2018 ATC04_10070 1e90136b79ddd2b8abfe7e7fbbf474f1 328 SUPERFAMILY SSF51735 118 317 4.87E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_10070 1e90136b79ddd2b8abfe7e7fbbf474f1 328 SUPERFAMILY SSF50129 1 152 3.04E-29 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_10070 1e90136b79ddd2b8abfe7e7fbbf474f1 328 SMART SM00829 10 318 3.8E-13 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATC04_10070 1e90136b79ddd2b8abfe7e7fbbf474f1 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 109 4.0E-7 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATC04_03680 f58d39484127502a8d21633aaef58145 1074 Pfam PF00176 SNF2 family N-terminal domain 627 895 8.8E-52 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 ATC04_03680 f58d39484127502a8d21633aaef58145 1074 SUPERFAMILY SSF52540 594 826 7.22E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03680 f58d39484127502a8d21633aaef58145 1074 Pfam PF00271 Helicase conserved C-terminal domain 906 1017 1.5E-14 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_03680 f58d39484127502a8d21633aaef58145 1074 Gene3D G3DSA:1.20.120.850 848 1060 5.3E-71 T 11-10-2018 ATC04_03680 f58d39484127502a8d21633aaef58145 1074 SMART SM00487 610 804 4.5E-22 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_03680 f58d39484127502a8d21633aaef58145 1074 SMART SM00490 935 1017 3.4E-15 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_03680 f58d39484127502a8d21633aaef58145 1074 SUPERFAMILY SSF52540 827 1072 1.49E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03680 f58d39484127502a8d21633aaef58145 1074 Gene3D G3DSA:3.40.50.10810 615 827 2.8E-61 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily ATC04_03680 f58d39484127502a8d21633aaef58145 1074 Gene3D G3DSA:3.40.50.300 834 1031 5.3E-71 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 SUPERFAMILY SSF55424 352 469 1.58E-27 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 316 4.7E-50 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 Gene3D G3DSA:3.50.50.60 11 329 1.3E-85 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 SUPERFAMILY SSF51905 9 334 1.52E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 Gene3D G3DSA:3.30.390.30 355 471 3.5E-27 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PIRSF PIRSF000350 1 470 7.7E-76 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 2.6E-25 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 2.6E-25 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 2.6E-25 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 276 2.6E-25 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 2.7E-54 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 2.7E-54 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 12 34 2.7E-54 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 2.7E-54 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 44 59 2.7E-54 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 352 373 2.7E-54 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 261 275 2.7E-54 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 2.7E-54 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 2.7E-54 T 11-10-2018 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 356 461 1.9E-21 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ATC04_10125 f5bdec3e8e536ff5af9479a4a6f9505f 475 Gene3D G3DSA:3.50.50.60 156 274 1.3E-85 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_08715 2e623c02ba40dc7e92cf427b3cce7f75 228 Pfam PF08713 DNA alkylation repair enzyme 14 193 2.7E-18 T 11-10-2018 IPR014825 DNA alkylation repair enzyme ATC04_08715 2e623c02ba40dc7e92cf427b3cce7f75 228 SUPERFAMILY SSF48371 13 227 4.03E-55 T 11-10-2018 IPR016024 Armadillo-type fold ATC04_15845 a1ac3f6a953380eb384aca37a819937d 261 Gene3D G3DSA:1.10.10.10 150 253 1.5E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_15845 a1ac3f6a953380eb384aca37a819937d 261 SMART SM00862 171 245 6.6E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_15845 a1ac3f6a953380eb384aca37a819937d 261 Pfam PF00486 Transcriptional regulatory protein, C terminal 171 245 1.9E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_15845 a1ac3f6a953380eb384aca37a819937d 261 SUPERFAMILY SSF46894 150 246 3.97E-25 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 304 1.4E-56 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 4 307 76.398 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 Gene3D G3DSA:3.40.50.1370 12 302 1.5E-114 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 5 306 5.6E-115 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 143 1.3E-41 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 Gene3D G3DSA:3.40.50.1370 133 293 1.5E-114 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 46 60 2.1E-28 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 119 133 2.1E-28 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 285 296 2.1E-28 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 223 233 2.1E-28 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 79 92 2.1E-28 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 SUPERFAMILY SSF53671 4 306 3.93E-99 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 259 268 5.0E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 5.0E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 271 294 5.0E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATC04_12470 1244bb90b34f8f95c4235a02874f7095 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 130 141 5.0E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATC04_12475 a5ffe854bea8b30b0c0147ae5d265fda 402 Gene3D G3DSA:3.90.1150.10 29 389 4.1E-131 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_12475 a5ffe854bea8b30b0c0147ae5d265fda 402 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 23 396 8.0E-133 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ATC04_12475 a5ffe854bea8b30b0c0147ae5d265fda 402 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 228 263 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_12475 a5ffe854bea8b30b0c0147ae5d265fda 402 SUPERFAMILY SSF53383 21 397 3.67E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_12475 a5ffe854bea8b30b0c0147ae5d265fda 402 PIRSF PIRSF000521 179 400 9.9E-33 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_12475 a5ffe854bea8b30b0c0147ae5d265fda 402 PIRSF PIRSF000521 30 170 8.9E-14 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_12475 a5ffe854bea8b30b0c0147ae5d265fda 402 Gene3D G3DSA:3.40.640.10 63 309 4.1E-131 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_12475 a5ffe854bea8b30b0c0147ae5d265fda 402 Pfam PF00202 Aminotransferase class-III 29 393 2.2E-107 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_12475 a5ffe854bea8b30b0c0147ae5d265fda 402 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 19 400 63.944 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ATC04_10370 212fb1d6835f2eabe0238adf10b12124 119 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_10370 212fb1d6835f2eabe0238adf10b12124 119 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 29.511 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_10370 212fb1d6835f2eabe0238adf10b12124 119 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 112 5.2E-47 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_10370 212fb1d6835f2eabe0238adf10b12124 119 PRINTS PR00061 Ribosomal protein L19 signature 3 32 4.5E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_10370 212fb1d6835f2eabe0238adf10b12124 119 PRINTS PR00061 Ribosomal protein L19 signature 87 112 4.5E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_10370 212fb1d6835f2eabe0238adf10b12124 119 PRINTS PR00061 Ribosomal protein L19 signature 33 62 4.5E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_10370 212fb1d6835f2eabe0238adf10b12124 119 Pfam PF01245 Ribosomal protein L19 3 112 6.2E-46 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_10370 212fb1d6835f2eabe0238adf10b12124 119 SUPERFAMILY SSF50104 1 114 4.51E-44 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily ATC04_10370 212fb1d6835f2eabe0238adf10b12124 119 PIRSF PIRSF002191 1 118 1.5E-46 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_10370 212fb1d6835f2eabe0238adf10b12124 119 Gene3D G3DSA:2.30.30.790 12 113 8.8E-16 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_17730 c819cf6b2768e64c070169f8893d57f6 473 Gene3D G3DSA:1.10.10.2600 126 252 1.4E-8 T 11-10-2018 IPR038109 DNA-binding recombinase domain superfamily ATC04_17730 c819cf6b2768e64c070169f8893d57f6 473 SUPERFAMILY SSF53041 4 138 9.68E-25 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ATC04_17730 c819cf6b2768e64c070169f8893d57f6 473 Pfam PF00239 Resolvase, N terminal domain 5 137 8.4E-27 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_17730 c819cf6b2768e64c070169f8893d57f6 473 Pfam PF07508 Recombinase 162 250 6.3E-5 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 ATC04_17730 c819cf6b2768e64c070169f8893d57f6 473 SMART SM00857 1 139 3.3E-29 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_17730 c819cf6b2768e64c070169f8893d57f6 473 Gene3D G3DSA:3.40.50.1390 2 121 9.1E-26 T 11-10-2018 ATC04_00100 c819cf6b2768e64c070169f8893d57f6 473 Gene3D G3DSA:1.10.10.2600 126 252 1.4E-8 T 11-10-2018 IPR038109 DNA-binding recombinase domain superfamily ATC04_00100 c819cf6b2768e64c070169f8893d57f6 473 SUPERFAMILY SSF53041 4 138 9.68E-25 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ATC04_00100 c819cf6b2768e64c070169f8893d57f6 473 Pfam PF00239 Resolvase, N terminal domain 5 137 8.4E-27 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_00100 c819cf6b2768e64c070169f8893d57f6 473 Pfam PF07508 Recombinase 162 250 6.3E-5 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 ATC04_00100 c819cf6b2768e64c070169f8893d57f6 473 SMART SM00857 1 139 3.3E-29 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_00100 c819cf6b2768e64c070169f8893d57f6 473 Gene3D G3DSA:3.40.50.1390 2 121 9.1E-26 T 11-10-2018 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 443 1.0E-168 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 Gene3D G3DSA:3.40.120.10 3 156 2.2E-40 T 11-10-2018 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 Gene3D G3DSA:3.40.120.10 257 340 2.4E-65 T 11-10-2018 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 SUPERFAMILY SSF53738 158 256 1.18E-26 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 Gene3D G3DSA:3.40.120.10 174 363 2.4E-65 T 11-10-2018 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 2.2E-31 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 SUPERFAMILY SSF53738 258 365 8.63E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 374 442 9.5E-13 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 5.5E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 5.5E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 5.5E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 SUPERFAMILY SSF53738 4 181 8.63E-39 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 445 43.08 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 6.2E-35 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 SUPERFAMILY SSF55957 358 446 1.57E-21 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 Gene3D G3DSA:3.30.310.50 371 447 7.4E-24 T 11-10-2018 ATC04_06280 d673d568ec99d468a15923d1bbc39fa2 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 254 3.6E-18 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_14375 b22bd909ecb68f342e070fd3ccb714d9 455 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 349 3.7E-39 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_14375 b22bd909ecb68f342e070fd3ccb714d9 455 Gene3D G3DSA:3.50.50.100 3 418 6.1E-99 T 11-10-2018 ATC04_14375 b22bd909ecb68f342e070fd3ccb714d9 455 SUPERFAMILY SSF51905 160 360 2.76E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14375 b22bd909ecb68f342e070fd3ccb714d9 455 SUPERFAMILY SSF51905 10 219 3.02E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14375 b22bd909ecb68f342e070fd3ccb714d9 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 3.0E-10 T 11-10-2018 ATC04_14375 b22bd909ecb68f342e070fd3ccb714d9 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 302 324 3.0E-10 T 11-10-2018 ATC04_14375 b22bd909ecb68f342e070fd3ccb714d9 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 3.0E-10 T 11-10-2018 ATC04_14375 b22bd909ecb68f342e070fd3ccb714d9 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 3.0E-10 T 11-10-2018 ATC04_11600 6fe9144b6e1cc665b76c4cfc55186d1c 333 Pfam PF00929 Exonuclease 8 157 6.1E-17 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ATC04_11600 6fe9144b6e1cc665b76c4cfc55186d1c 333 SUPERFAMILY SSF52113 236 323 8.6E-9 T 11-10-2018 IPR036420 BRCT domain superfamily ATC04_11600 6fe9144b6e1cc665b76c4cfc55186d1c 333 Gene3D G3DSA:3.40.50.10190 223 327 2.2E-16 T 11-10-2018 IPR036420 BRCT domain superfamily ATC04_11600 6fe9144b6e1cc665b76c4cfc55186d1c 333 SMART SM00479 4 170 4.8E-16 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ATC04_11600 6fe9144b6e1cc665b76c4cfc55186d1c 333 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 238 296 1.4E-6 T 11-10-2018 IPR001357 BRCT domain ATC04_11600 6fe9144b6e1cc665b76c4cfc55186d1c 333 Gene3D G3DSA:3.30.420.10 2 172 7.7E-31 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_11600 6fe9144b6e1cc665b76c4cfc55186d1c 333 SUPERFAMILY SSF53098 4 167 8.02E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_14210 c4d5688d39dd954cda325d954c5999d6 197 Pfam PF04138 GtrA-like protein 22 144 7.1E-24 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 ATC04_10450 a00271804e133871c16007c7e90a2d2f 569 Gene3D G3DSA:3.40.50.12780 13 442 6.4E-106 T 11-10-2018 ATC04_10450 a00271804e133871c16007c7e90a2d2f 569 Pfam PF13193 AMP-binding enzyme C-terminal domain 457 534 3.1E-19 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ATC04_10450 a00271804e133871c16007c7e90a2d2f 569 Pfam PF00501 AMP-binding enzyme 51 448 1.4E-71 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_10450 a00271804e133871c16007c7e90a2d2f 569 SUPERFAMILY SSF56801 17 557 1.44E-124 T 11-10-2018 ATC04_10450 a00271804e133871c16007c7e90a2d2f 569 Gene3D G3DSA:3.30.300.310 444 549 3.6E-22 T 11-10-2018 ATC04_10640 8e4e3cf86f7925793d4ce36673074385 729 SUPERFAMILY SSF52540 188 464 2.55E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10640 8e4e3cf86f7925793d4ce36673074385 729 Pfam PF00270 DEAD/DEAH box helicase 293 446 1.0E-14 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATC04_10640 8e4e3cf86f7925793d4ce36673074385 729 Pfam PF17191 RecG wedge domain 17 178 2.1E-10 T 11-10-2018 IPR033454 RecG, wedge domain ATC04_10640 8e4e3cf86f7925793d4ce36673074385 729 Gene3D G3DSA:2.40.50.140 51 151 5.2E-18 T 11-10-2018 ATC04_10640 8e4e3cf86f7925793d4ce36673074385 729 SMART SM00487 268 470 7.0E-29 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_10640 8e4e3cf86f7925793d4ce36673074385 729 Gene3D G3DSA:3.40.50.300 214 461 5.5E-81 T 11-10-2018 ATC04_10640 8e4e3cf86f7925793d4ce36673074385 729 Pfam PF00271 Helicase conserved C-terminal domain 491 617 1.7E-17 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_10640 8e4e3cf86f7925793d4ce36673074385 729 Gene3D G3DSA:3.40.50.300 469 658 1.2E-47 T 11-10-2018 ATC04_10640 8e4e3cf86f7925793d4ce36673074385 729 SUPERFAMILY SSF50249 17 181 4.46E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_10640 8e4e3cf86f7925793d4ce36673074385 729 SMART SM00490 528 617 1.4E-20 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_10640 8e4e3cf86f7925793d4ce36673074385 729 SUPERFAMILY SSF52540 401 625 7.99E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_01250 cf8c10888526630667f0cad807c80f7c 518 Pfam PF00890 FAD binding domain 13 495 5.7E-85 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_01250 cf8c10888526630667f0cad807c80f7c 518 SUPERFAMILY SSF56425 290 454 5.38E-32 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_01250 cf8c10888526630667f0cad807c80f7c 518 Gene3D G3DSA:3.90.700.10 300 443 1.8E-167 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_01250 cf8c10888526630667f0cad807c80f7c 518 Gene3D G3DSA:3.50.50.60 10 506 1.8E-167 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_01250 cf8c10888526630667f0cad807c80f7c 518 SUPERFAMILY SSF51905 9 509 9.82E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_15070 03d08ba93b7f58d09c1496202b9a8439 308 SUPERFAMILY SSF160240 219 297 1.44E-7 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ATC04_15070 03d08ba93b7f58d09c1496202b9a8439 308 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 298 3.6E-69 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ATC04_15070 03d08ba93b7f58d09c1496202b9a8439 308 Gene3D G3DSA:1.20.1510.10 18 212 2.6E-37 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ATC04_15070 03d08ba93b7f58d09c1496202b9a8439 308 SUPERFAMILY SSF161111 17 213 4.58E-48 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ATC04_15070 03d08ba93b7f58d09c1496202b9a8439 308 Pfam PF01545 Cation efflux family 24 212 3.7E-38 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ATC04_11775 3543d617bdb48c4ad6b1f6b02b662cfa 89 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 5.2E-21 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11775 3543d617bdb48c4ad6b1f6b02b662cfa 89 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 89 10.807 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11775 3543d617bdb48c4ad6b1f6b02b662cfa 89 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 85 1.1E-19 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11775 3543d617bdb48c4ad6b1f6b02b662cfa 89 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 17 85 3.0E-21 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11775 3543d617bdb48c4ad6b1f6b02b662cfa 89 SUPERFAMILY SSF51344 4 84 9.42E-20 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11775 3543d617bdb48c4ad6b1f6b02b662cfa 89 Gene3D G3DSA:2.60.15.10 1 88 7.9E-22 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 Gene3D G3DSA:3.20.20.60 5 330 5.9E-131 T 11-10-2018 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 PRINTS PR01050 Pyruvate kinase family signature 242 266 2.6E-64 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.6E-64 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 PRINTS PR01050 Pyruvate kinase family signature 292 310 2.6E-64 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 PRINTS PR01050 Pyruvate kinase family signature 311 327 2.6E-64 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 PRINTS PR01050 Pyruvate kinase family signature 215 241 2.6E-64 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 PRINTS PR01050 Pyruvate kinase family signature 185 199 2.6E-64 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 PRINTS PR01050 Pyruvate kinase family signature 267 291 2.6E-64 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 ProSitePatterns PS00110 Pyruvate kinase active site signature. 213 225 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 SUPERFAMILY SSF51621 1 336 2.36E-95 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 SUPERFAMILY SSF50800 70 165 3.49E-25 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 Gene3D G3DSA:2.40.33.10 71 166 5.9E-131 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 468 1.2E-159 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 SUPERFAMILY SSF52935 321 469 4.71E-38 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 Gene3D G3DSA:3.40.1380.20 343 469 3.8E-33 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 Pfam PF02887 Pyruvate kinase, alpha/beta domain 354 466 7.8E-27 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_07950 6fbd088ef9dcaa0cb61df314965fdf95 503 Pfam PF00224 Pyruvate kinase, barrel domain 1 335 2.1E-118 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATC04_11670 9cb079dd70a2b2646de2568b5a8524d0 313 Pfam PF12706 Beta-lactamase superfamily domain 35 233 1.4E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_11670 9cb079dd70a2b2646de2568b5a8524d0 313 SUPERFAMILY SSF56281 1 263 1.52E-44 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_11670 9cb079dd70a2b2646de2568b5a8524d0 313 Gene3D G3DSA:3.60.15.10 1 265 1.2E-64 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_00645 2190ee420231f90bd1c51cda56e1fdd4 375 SMART SM00480 17 367 9.9E-107 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ATC04_00645 2190ee420231f90bd1c51cda56e1fdd4 375 SUPERFAMILY SSF55979 245 371 3.45E-27 T 11-10-2018 ATC04_00645 2190ee420231f90bd1c51cda56e1fdd4 375 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 371 1.3E-93 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ATC04_00645 2190ee420231f90bd1c51cda56e1fdd4 375 PIRSF PIRSF000804 1 372 9.8E-99 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ATC04_00645 2190ee420231f90bd1c51cda56e1fdd4 375 Gene3D G3DSA:3.10.150.10 248 373 3.2E-39 T 11-10-2018 ATC04_00645 2190ee420231f90bd1c51cda56e1fdd4 375 Pfam PF02767 DNA polymerase III beta subunit, central domain 127 243 2.7E-29 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 ATC04_00645 2190ee420231f90bd1c51cda56e1fdd4 375 Gene3D G3DSA:3.10.150.10 123 246 1.7E-34 T 11-10-2018 ATC04_00645 2190ee420231f90bd1c51cda56e1fdd4 375 Gene3D G3DSA:3.10.150.10 1 121 1.2E-41 T 11-10-2018 ATC04_00645 2190ee420231f90bd1c51cda56e1fdd4 375 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 2 118 3.1E-33 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 ATC04_00645 2190ee420231f90bd1c51cda56e1fdd4 375 SUPERFAMILY SSF55979 126 242 9.67E-24 T 11-10-2018 ATC04_00645 2190ee420231f90bd1c51cda56e1fdd4 375 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 370 5.9E-28 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 ATC04_00645 2190ee420231f90bd1c51cda56e1fdd4 375 SUPERFAMILY SSF55979 2 118 8.16E-25 T 11-10-2018 ATC04_04125 64e1b5206e1aac2b809f846737aaf44d 1152 SUPERFAMILY SSF51730 126 453 1.14E-70 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like ATC04_04125 64e1b5206e1aac2b809f846737aaf44d 1152 PIRSF PIRSF000197 4 1151 1.4E-272 T 11-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ATC04_04125 64e1b5206e1aac2b809f846737aaf44d 1152 Pfam PF00171 Aldehyde dehydrogenase family 518 934 3.3E-103 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_04125 64e1b5206e1aac2b809f846737aaf44d 1152 SUPERFAMILY SSF53720 511 934 1.7E-99 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_04125 64e1b5206e1aac2b809f846737aaf44d 1152 Pfam PF01619 Proline dehydrogenase 128 417 6.9E-59 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 ATC04_04125 64e1b5206e1aac2b809f846737aaf44d 1152 Gene3D G3DSA:3.40.309.10 718 909 6.7E-109 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_04125 64e1b5206e1aac2b809f846737aaf44d 1152 Gene3D G3DSA:3.40.605.10 508 934 6.7E-109 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_04125 64e1b5206e1aac2b809f846737aaf44d 1152 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 742 753 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ATC04_04125 64e1b5206e1aac2b809f846737aaf44d 1152 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 714 721 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ATC04_04125 64e1b5206e1aac2b809f846737aaf44d 1152 Gene3D G3DSA:3.20.20.220 59 455 5.6E-105 T 11-10-2018 ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 205 3.2E-4 T 11-10-2018 ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 Gene3D G3DSA:3.40.50.720 1 258 2.4E-72 T 11-10-2018 ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 SUPERFAMILY SSF51735 1 255 6.42E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 Pfam PF00106 short chain dehydrogenase 7 206 3.0E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.8E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.8E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.8E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 4.9E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 4.9E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 4.9E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 4.9E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16185 55d3cc7fec5780264ace2887c36d3be5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 4.9E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_07380 6d54b22ce78dc30b4c7390581ca34cb9 241 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 37 1.6E-14 T 11-10-2018 IPR019933 DivIVA domain ATC04_07380 6d54b22ce78dc30b4c7390581ca34cb9 241 Pfam PF05103 DivIVA protein 3 65 3.7E-12 T 11-10-2018 IPR007793 DivIVA family ATC04_17510 01794259c5f24469ec8f9188fce6cd65 442 SUPERFAMILY SSF55846 18 149 1.25E-27 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ATC04_17510 01794259c5f24469ec8f9188fce6cd65 442 Gene3D G3DSA:3.40.80.10 1 149 1.7E-34 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ATC04_17510 01794259c5f24469ec8f9188fce6cd65 442 SMART SM00644 6 135 6.2E-9 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ATC04_17510 01794259c5f24469ec8f9188fce6cd65 442 Pfam PF01551 Peptidase family M23 181 287 2.0E-12 T 11-10-2018 IPR016047 Peptidase M23 ATC04_17510 01794259c5f24469ec8f9188fce6cd65 442 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 20 135 9.4E-14 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ATC04_17510 01794259c5f24469ec8f9188fce6cd65 442 Gene3D G3DSA:2.70.70.10 151 311 3.3E-24 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_17510 01794259c5f24469ec8f9188fce6cd65 442 SUPERFAMILY SSF51261 146 287 6.8E-18 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_17750 01794259c5f24469ec8f9188fce6cd65 442 SUPERFAMILY SSF55846 18 149 1.25E-27 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ATC04_17750 01794259c5f24469ec8f9188fce6cd65 442 Gene3D G3DSA:3.40.80.10 1 149 1.7E-34 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ATC04_17750 01794259c5f24469ec8f9188fce6cd65 442 SMART SM00644 6 135 6.2E-9 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ATC04_17750 01794259c5f24469ec8f9188fce6cd65 442 Pfam PF01551 Peptidase family M23 181 287 2.0E-12 T 11-10-2018 IPR016047 Peptidase M23 ATC04_17750 01794259c5f24469ec8f9188fce6cd65 442 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 20 135 9.4E-14 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ATC04_17750 01794259c5f24469ec8f9188fce6cd65 442 Gene3D G3DSA:2.70.70.10 151 311 3.3E-24 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_17750 01794259c5f24469ec8f9188fce6cd65 442 SUPERFAMILY SSF51261 146 287 6.8E-18 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_08365 98b151cba2b36d3b6276467f2bd8782a 564 Gene3D G3DSA:3.50.50.60 3 294 1.7E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_08365 98b151cba2b36d3b6276467f2bd8782a 564 Gene3D G3DSA:3.50.50.60 476 563 5.2E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_08365 98b151cba2b36d3b6276467f2bd8782a 564 SUPERFAMILY SSF51905 8 561 1.07E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_08365 98b151cba2b36d3b6276467f2bd8782a 564 PIRSF PIRSF036654 5 563 1.2E-271 T 11-10-2018 IPR014614 Uncharacterised conserved protein UCP036654 GO:0016627|GO:0055114 ATC04_08365 98b151cba2b36d3b6276467f2bd8782a 564 Pfam PF00890 FAD binding domain 11 545 2.8E-99 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_05920 2f660e1d2f39dbc01ae1d7d2507e56e5 372 SMART SM00859 4 123 4.4E-20 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ATC04_05920 2f660e1d2f39dbc01ae1d7d2507e56e5 372 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 263 277 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ATC04_05920 2f660e1d2f39dbc01ae1d7d2507e56e5 372 SUPERFAMILY SSF51735 4 148 5.69E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_05920 2f660e1d2f39dbc01ae1d7d2507e56e5 372 Gene3D G3DSA:3.40.50.720 5 358 1.2E-133 T 11-10-2018 ATC04_05920 2f660e1d2f39dbc01ae1d7d2507e56e5 372 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 122 2.2E-19 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ATC04_05920 2f660e1d2f39dbc01ae1d7d2507e56e5 372 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 355 3.0E-50 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATC04_05920 2f660e1d2f39dbc01ae1d7d2507e56e5 372 PIRSF PIRSF000148 2 372 9.7E-57 T 11-10-2018 ATC04_05920 2f660e1d2f39dbc01ae1d7d2507e56e5 372 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 4 367 8.5E-178 T 11-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ATC04_05920 2f660e1d2f39dbc01ae1d7d2507e56e5 372 Gene3D G3DSA:3.30.360.10 136 352 1.2E-133 T 11-10-2018 ATC04_05920 2f660e1d2f39dbc01ae1d7d2507e56e5 372 SUPERFAMILY SSF55347 135 356 1.76E-69 T 11-10-2018 ATC04_09970 77190b4e93f175333cc80e82e541f3a7 251 Gene3D G3DSA:3.40.50.720 4 242 3.5E-32 T 11-10-2018 ATC04_09970 77190b4e93f175333cc80e82e541f3a7 251 SUPERFAMILY SSF51735 7 241 1.09E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_09970 77190b4e93f175333cc80e82e541f3a7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 4.2E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09970 77190b4e93f175333cc80e82e541f3a7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.2E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09970 77190b4e93f175333cc80e82e541f3a7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.2E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09970 77190b4e93f175333cc80e82e541f3a7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 4.2E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09970 77190b4e93f175333cc80e82e541f3a7 251 Pfam PF00106 short chain dehydrogenase 8 191 1.1E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_15900 87c012f9db70e8cb8ceb1164b3dc4b52 1239 Gene3D G3DSA:3.40.50.12440 59 1239 0.0 T 11-10-2018 ATC04_15900 87c012f9db70e8cb8ceb1164b3dc4b52 1239 Pfam PF00384 Molybdopterin oxidoreductase 123 839 1.3E-131 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_15900 87c012f9db70e8cb8ceb1164b3dc4b52 1239 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 63 81 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 ATC04_15900 87c012f9db70e8cb8ceb1164b3dc4b52 1239 SUPERFAMILY SSF50692 1086 1233 3.84E-42 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ATC04_15900 87c012f9db70e8cb8ceb1164b3dc4b52 1239 SMART SM00926 58 120 1.2E-6 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_15900 87c012f9db70e8cb8ceb1164b3dc4b52 1239 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 29 1232 0.0 T 11-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 ATC04_15900 87c012f9db70e8cb8ceb1164b3dc4b52 1239 SUPERFAMILY SSF53706 19 1066 0.0 T 11-10-2018 ATC04_15900 87c012f9db70e8cb8ceb1164b3dc4b52 1239 Pfam PF01568 Molydopterin dinucleotide binding domain 1092 1201 1.6E-21 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ATC04_06310 9a8a954df1e6e0548b000f94fe253a67 482 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 201 479 9.9E-44 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ATC04_06310 9a8a954df1e6e0548b000f94fe253a67 482 Pfam PF01256 Carbohydrate kinase 214 470 2.1E-41 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ATC04_06310 9a8a954df1e6e0548b000f94fe253a67 482 Gene3D G3DSA:3.40.1190.20 183 481 4.1E-60 T 11-10-2018 IPR029056 Ribokinase-like ATC04_06310 9a8a954df1e6e0548b000f94fe253a67 482 Gene3D G3DSA:3.40.50.10260 1 176 1.4E-31 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 ATC04_06310 9a8a954df1e6e0548b000f94fe253a67 482 SUPERFAMILY SSF64153 1 211 1.57E-30 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 ATC04_06310 9a8a954df1e6e0548b000f94fe253a67 482 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 190 482 17.398 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ATC04_06310 9a8a954df1e6e0548b000f94fe253a67 482 PIRSF PIRSF017184 1 480 1.7E-71 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 ATC04_06310 9a8a954df1e6e0548b000f94fe253a67 482 Pfam PF03853 YjeF-related protein N-terminus 1 153 2.2E-23 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ATC04_06310 9a8a954df1e6e0548b000f94fe253a67 482 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 407 417 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site ATC04_06310 9a8a954df1e6e0548b000f94fe253a67 482 SUPERFAMILY SSF53613 192 479 6.11E-47 T 11-10-2018 IPR029056 Ribokinase-like ATC04_04405 8354836ff705b41f964874df72d16e64 351 Gene3D G3DSA:3.40.50.1980 188 348 7.9E-42 T 11-10-2018 ATC04_04405 8354836ff705b41f964874df72d16e64 351 SUPERFAMILY SSF53807 47 339 9.42E-44 T 11-10-2018 ATC04_04405 8354836ff705b41f964874df72d16e64 351 Pfam PF01497 Periplasmic binding protein 65 309 4.7E-31 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ATC04_04405 8354836ff705b41f964874df72d16e64 351 Gene3D G3DSA:3.40.50.1980 43 186 9.3E-32 T 11-10-2018 ATC04_01365 bf52d82791522083385b1f0f31a4ac6d 478 Pfam PF07690 Major Facilitator Superfamily 303 474 1.8E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_01365 bf52d82791522083385b1f0f31a4ac6d 478 Pfam PF07690 Major Facilitator Superfamily 28 291 1.4E-25 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_01365 bf52d82791522083385b1f0f31a4ac6d 478 ProSitePatterns PS00216 Sugar transport proteins signature 1. 77 93 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_01365 bf52d82791522083385b1f0f31a4ac6d 478 Gene3D G3DSA:1.20.1250.20 271 477 2.2E-18 T 11-10-2018 ATC04_01365 bf52d82791522083385b1f0f31a4ac6d 478 Gene3D G3DSA:1.20.1250.20 15 207 2.8E-32 T 11-10-2018 ATC04_01365 bf52d82791522083385b1f0f31a4ac6d 478 PRINTS PR01035 Tetracycline resistance protein signature 117 138 5.8E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_01365 bf52d82791522083385b1f0f31a4ac6d 478 PRINTS PR01035 Tetracycline resistance protein signature 33 49 5.8E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_01365 bf52d82791522083385b1f0f31a4ac6d 478 PRINTS PR01035 Tetracycline resistance protein signature 240 257 5.8E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_01365 bf52d82791522083385b1f0f31a4ac6d 478 PRINTS PR01035 Tetracycline resistance protein signature 147 169 5.8E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_01365 bf52d82791522083385b1f0f31a4ac6d 478 SUPERFAMILY SSF103473 11 475 1.02E-53 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_10305 307c94844db27afe29b17a5b5c8898a0 191 Pfam PF01872 RibD C-terminal domain 2 183 6.1E-32 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ATC04_10305 307c94844db27afe29b17a5b5c8898a0 191 Gene3D G3DSA:3.40.430.10 1 187 6.0E-33 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_10305 307c94844db27afe29b17a5b5c8898a0 191 SUPERFAMILY SSF53597 5 183 2.27E-23 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_15885 ff7f8aeb59aa72aaeed3eab99a459b52 180 SUPERFAMILY SSF52980 2 178 4.83E-46 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ATC04_15885 ff7f8aeb59aa72aaeed3eab99a459b52 180 Gene3D G3DSA:3.10.640.10 1 179 2.1E-49 T 11-10-2018 IPR038590 YaeQ superfamily ATC04_15885 ff7f8aeb59aa72aaeed3eab99a459b52 180 PIRSF PIRSF011484 1 180 2.2E-51 T 11-10-2018 IPR009822 YaeQ ATC04_15885 ff7f8aeb59aa72aaeed3eab99a459b52 180 Pfam PF07152 YaeQ protein 1 173 1.5E-52 T 11-10-2018 IPR009822 YaeQ ATC04_15885 ff7f8aeb59aa72aaeed3eab99a459b52 180 SMART SM01322 1 176 3.9E-56 T 11-10-2018 IPR009822 YaeQ ATC04_07350 65e8b112f778af3b63de2d5504f1aa86 465 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 14 459 1.0E-136 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_07350 65e8b112f778af3b63de2d5504f1aa86 465 SUPERFAMILY SSF51984 14 99 2.75E-21 T 11-10-2018 ATC04_07350 65e8b112f778af3b63de2d5504f1aa86 465 Pfam PF08245 Mur ligase middle domain 118 302 5.2E-29 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ATC04_07350 65e8b112f778af3b63de2d5504f1aa86 465 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 12 465 36.231 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_07350 65e8b112f778af3b63de2d5504f1aa86 465 Pfam PF01225 Mur ligase family, catalytic domain 14 112 1.1E-17 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ATC04_07350 65e8b112f778af3b63de2d5504f1aa86 465 Gene3D G3DSA:3.40.50.720 13 100 4.9E-25 T 11-10-2018 ATC04_07350 65e8b112f778af3b63de2d5504f1aa86 465 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 409 7.1E-22 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ATC04_07350 65e8b112f778af3b63de2d5504f1aa86 465 Gene3D G3DSA:3.90.190.20 321 464 2.9E-47 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATC04_07350 65e8b112f778af3b63de2d5504f1aa86 465 SUPERFAMILY SSF53623 100 320 4.73E-58 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATC04_07350 65e8b112f778af3b63de2d5504f1aa86 465 Gene3D G3DSA:3.40.1190.10 101 320 7.0E-72 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATC04_07350 65e8b112f778af3b63de2d5504f1aa86 465 SUPERFAMILY SSF53244 322 464 4.43E-41 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATC04_04915 33ee8479c7df948bd05ee1191695d0a6 634 SUPERFAMILY SSF53474 117 567 3.37E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_04915 33ee8479c7df948bd05ee1191695d0a6 634 Pfam PF08386 TAP-like protein 490 593 4.0E-21 T 11-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal ATC04_04915 33ee8479c7df948bd05ee1191695d0a6 634 Pfam PF00561 alpha/beta hydrolase fold 122 289 1.3E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_06805 e24fd118bff821d65a2301418793bdea 318 TIGRFAM TIGR03535 DapD_actino: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 16 318 3.1E-151 T 11-10-2018 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria KEGG: 00300+2.3.1.117 ATC04_06805 e24fd118bff821d65a2301418793bdea 318 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 14 316 42.636 T 11-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 ATC04_06805 e24fd118bff821d65a2301418793bdea 318 Gene3D G3DSA:2.160.10.10 153 318 8.6E-67 T 11-10-2018 ATC04_06805 e24fd118bff821d65a2301418793bdea 318 Gene3D G3DSA:3.30.60.70 113 152 2.2E-22 T 11-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 ATC04_06805 e24fd118bff821d65a2301418793bdea 318 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 113 152 6.5E-19 T 11-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 ATC04_06805 e24fd118bff821d65a2301418793bdea 318 SUPERFAMILY SSF51161 84 298 2.08E-38 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ATC04_06805 e24fd118bff821d65a2301418793bdea 318 Gene3D G3DSA:3.30.70.2010 9 112 2.7E-35 T 11-10-2018 ATC04_06805 e24fd118bff821d65a2301418793bdea 318 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 234 266 2.0E-13 T 11-10-2018 IPR001451 Hexapeptide repeat ATC04_09505 29f556879825c478bf16d3cf3db7fa29 295 Gene3D G3DSA:1.10.287.90 43 130 6.5E-15 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09505 29f556879825c478bf16d3cf3db7fa29 295 Gene3D G3DSA:2.60.40.2600 131 285 1.0E-41 T 11-10-2018 ATC04_09505 29f556879825c478bf16d3cf3db7fa29 295 PRINTS PR01166 Cytochrome c oxidase subunit II signature 219 236 3.1E-11 T 11-10-2018 ATC04_09505 29f556879825c478bf16d3cf3db7fa29 295 PRINTS PR01166 Cytochrome c oxidase subunit II signature 98 110 3.1E-11 T 11-10-2018 ATC04_09505 29f556879825c478bf16d3cf3db7fa29 295 PRINTS PR01166 Cytochrome c oxidase subunit II signature 199 219 3.1E-11 T 11-10-2018 ATC04_09505 29f556879825c478bf16d3cf3db7fa29 295 PRINTS PR01166 Cytochrome c oxidase subunit II signature 132 151 3.1E-11 T 11-10-2018 ATC04_09505 29f556879825c478bf16d3cf3db7fa29 295 PRINTS PR01166 Cytochrome c oxidase subunit II signature 237 254 3.1E-11 T 11-10-2018 ATC04_09505 29f556879825c478bf16d3cf3db7fa29 295 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 200 248 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09505 29f556879825c478bf16d3cf3db7fa29 295 SUPERFAMILY SSF49503 131 270 1.47E-38 T 11-10-2018 IPR008972 Cupredoxin ATC04_09505 29f556879825c478bf16d3cf3db7fa29 295 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 137 253 6.5E-20 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09505 29f556879825c478bf16d3cf3db7fa29 295 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 51 263 3.7E-49 T 11-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09505 29f556879825c478bf16d3cf3db7fa29 295 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 51 120 4.9E-5 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09505 29f556879825c478bf16d3cf3db7fa29 295 SUPERFAMILY SSF81464 26 125 3.11E-17 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_05505 db839a8e46efd3b1c5ba600a026898a5 331 Gene3D G3DSA:3.30.390.10 19 320 8.9E-113 T 11-10-2018 IPR029017 Enolase-like, N-terminal ATC04_05505 db839a8e46efd3b1c5ba600a026898a5 331 Gene3D G3DSA:3.20.20.120 71 300 8.9E-113 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ATC04_05505 db839a8e46efd3b1c5ba600a026898a5 331 SMART SM00922 91 185 6.8E-12 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ATC04_05505 db839a8e46efd3b1c5ba600a026898a5 331 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 9 317 20.251 T 11-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 ATC04_05505 db839a8e46efd3b1c5ba600a026898a5 331 SUPERFAMILY SSF51604 77 294 1.1E-44 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ATC04_05505 db839a8e46efd3b1c5ba600a026898a5 331 Pfam PF13378 Enolase C-terminal domain-like 105 295 3.0E-29 T 11-10-2018 IPR029065 Enolase C-terminal domain-like ATC04_00080 bd6eed3e7579d4a5b776f424b5a471e0 197 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 8 72 4.9E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_00080 bd6eed3e7579d4a5b776f424b5a471e0 197 SUPERFAMILY SSF47413 2 69 7.13E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_00080 bd6eed3e7579d4a5b776f424b5a471e0 197 Gene3D G3DSA:1.10.260.40 10 71 4.7E-9 T 11-10-2018 ATC04_00080 bd6eed3e7579d4a5b776f424b5a471e0 197 SMART SM00530 7 67 4.9E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_17710 bd6eed3e7579d4a5b776f424b5a471e0 197 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 8 72 4.9E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_17710 bd6eed3e7579d4a5b776f424b5a471e0 197 SUPERFAMILY SSF47413 2 69 7.13E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_17710 bd6eed3e7579d4a5b776f424b5a471e0 197 Gene3D G3DSA:1.10.260.40 10 71 4.7E-9 T 11-10-2018 ATC04_17710 bd6eed3e7579d4a5b776f424b5a471e0 197 SMART SM00530 7 67 4.9E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_01175 84962d648b0d0b995ebd4b842e3a33c6 257 Pfam PF09339 IclR helix-turn-helix domain 15 65 2.9E-17 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_01175 84962d648b0d0b995ebd4b842e3a33c6 257 SMART SM00346 13 100 1.5E-21 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_01175 84962d648b0d0b995ebd4b842e3a33c6 257 Gene3D G3DSA:1.10.10.10 11 85 1.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_01175 84962d648b0d0b995ebd4b842e3a33c6 257 Gene3D G3DSA:3.30.450.40 86 256 4.3E-53 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_01175 84962d648b0d0b995ebd4b842e3a33c6 257 SUPERFAMILY SSF55781 70 252 2.16E-48 T 11-10-2018 ATC04_01175 84962d648b0d0b995ebd4b842e3a33c6 257 SUPERFAMILY SSF46785 13 86 1.72E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_01175 84962d648b0d0b995ebd4b842e3a33c6 257 Pfam PF01614 Bacterial transcriptional regulator 128 249 1.1E-30 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ATC04_01325 8009dc1c78ae7da08cad4748933e9bc3 488 Pfam PF07690 Major Facilitator Superfamily 294 476 2.7E-10 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_01325 8009dc1c78ae7da08cad4748933e9bc3 488 Pfam PF07690 Major Facilitator Superfamily 26 239 1.2E-26 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_01325 8009dc1c78ae7da08cad4748933e9bc3 488 Gene3D G3DSA:1.20.1250.20 311 477 2.6E-15 T 11-10-2018 ATC04_01325 8009dc1c78ae7da08cad4748933e9bc3 488 SUPERFAMILY SSF103473 10 471 7.85E-50 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_01325 8009dc1c78ae7da08cad4748933e9bc3 488 Gene3D G3DSA:1.20.1250.20 17 310 1.4E-32 T 11-10-2018 ATC04_12070 b9e9f2fae2e4d39b8fb06e760fc5b3f9 60 Pfam PF08279 HTH domain 10 32 2.0E-4 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 ATC04_12070 b9e9f2fae2e4d39b8fb06e760fc5b3f9 60 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 15 52 2.3E-7 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 ATC04_12070 b9e9f2fae2e4d39b8fb06e760fc5b3f9 60 Gene3D G3DSA:1.10.1660.10 5 59 1.3E-14 T 11-10-2018 ATC04_14675 3559f9f4c59ef44060ecfcdc589f5fca 387 PIRSF PIRSF035875 36 342 1.3E-79 T 11-10-2018 IPR017039 Virulence factor BrkB ATC04_14675 3559f9f4c59ef44060ecfcdc589f5fca 387 Pfam PF03631 Virulence factor BrkB 66 323 3.4E-59 T 11-10-2018 IPR017039 Virulence factor BrkB ATC04_14675 3559f9f4c59ef44060ecfcdc589f5fca 387 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 58 317 2.2E-32 T 11-10-2018 IPR017039 Virulence factor BrkB ATC04_06620 825817de7e9ea19fc43970d07e38cdd8 145 Pfam PF13673 Acetyltransferase (GNAT) domain 38 135 1.1E-12 T 11-10-2018 IPR000182 GNAT domain ATC04_06620 825817de7e9ea19fc43970d07e38cdd8 145 Gene3D G3DSA:3.40.630.30 14 136 3.8E-30 T 11-10-2018 ATC04_06620 825817de7e9ea19fc43970d07e38cdd8 145 SUPERFAMILY SSF55729 21 134 1.5E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_09315 0383e329aa319409379afdf7e8b426b4 654 SUPERFAMILY SSF52540 182 276 2.86E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09315 0383e329aa319409379afdf7e8b426b4 654 Hamap MF_00983 Probable primosomal protein N' [priA]. 24 653 18.415 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 ATC04_09315 0383e329aa319409379afdf7e8b426b4 654 Gene3D G3DSA:1.10.8.630 17 129 2.5E-20 T 11-10-2018 ATC04_09315 0383e329aa319409379afdf7e8b426b4 654 Gene3D G3DSA:3.40.50.300 180 328 1.1E-25 T 11-10-2018 ATC04_08865 d6cd4036931053ee00c0dbfd65a73064 324 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 102 118 - T 11-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08865 d6cd4036931053ee00c0dbfd65a73064 324 Pfam PF00268 Ribonucleotide reductase, small chain 14 279 3.5E-89 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08865 d6cd4036931053ee00c0dbfd65a73064 324 Gene3D G3DSA:1.10.620.20 1 296 3.2E-113 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 ATC04_08865 d6cd4036931053ee00c0dbfd65a73064 324 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 12 324 3.1E-145 T 11-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATC04_08865 d6cd4036931053ee00c0dbfd65a73064 324 SUPERFAMILY SSF47240 6 324 4.6E-105 T 11-10-2018 IPR009078 Ferritin-like superfamily ATC04_08865 d6cd4036931053ee00c0dbfd65a73064 324 PIRSF PIRSF000355 1 321 1.5E-79 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_05425 a47702d4161f61c771e6a5780c24a85e 719 Gene3D G3DSA:2.130.10.120 78 440 6.2E-241 T 11-10-2018 ATC04_05425 a47702d4161f61c771e6a5780c24a85e 719 SUPERFAMILY SSF50993 7 441 1.26E-74 T 11-10-2018 ATC04_05425 a47702d4161f61c771e6a5780c24a85e 719 SUPERFAMILY SSF53474 454 691 3.59E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_05425 a47702d4161f61c771e6a5780c24a85e 719 Pfam PF00326 Prolyl oligopeptidase family 502 713 2.3E-61 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATC04_05425 a47702d4161f61c771e6a5780c24a85e 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 535 554 6.1E-52 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATC04_05425 a47702d4161f61c771e6a5780c24a85e 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 624 639 6.1E-52 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATC04_05425 a47702d4161f61c771e6a5780c24a85e 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 481 499 6.1E-52 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATC04_05425 a47702d4161f61c771e6a5780c24a85e 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 565 585 6.1E-52 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATC04_05425 a47702d4161f61c771e6a5780c24a85e 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 642 664 6.1E-52 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATC04_05425 a47702d4161f61c771e6a5780c24a85e 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 507 531 6.1E-52 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATC04_05425 a47702d4161f61c771e6a5780c24a85e 719 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 13 438 2.1E-77 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 ATC04_05425 a47702d4161f61c771e6a5780c24a85e 719 Gene3D G3DSA:3.40.50.1820 29 708 6.2E-241 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_05425 a47702d4161f61c771e6a5780c24a85e 719 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 542 572 - T 11-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 ATC04_01100 a3c7da682d674ea1ce8ee2b17d83a915 264 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 138 158 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site ATC04_01100 a3c7da682d674ea1ce8ee2b17d83a915 264 Gene3D G3DSA:3.60.110.10 1 263 3.2E-66 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ATC04_01100 a3c7da682d674ea1ce8ee2b17d83a915 264 SUPERFAMILY SSF56317 1 258 1.96E-63 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ATC04_01100 a3c7da682d674ea1ce8ee2b17d83a915 264 Pfam PF00795 Carbon-nitrogen hydrolase 2 253 6.2E-42 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ATC04_04330 63be4bdcb16dc6523b3a8f438ccf194b 353 Gene3D G3DSA:3.20.20.100 28 352 1.8E-109 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ATC04_04330 63be4bdcb16dc6523b3a8f438ccf194b 353 SUPERFAMILY SSF51430 28 339 2.49E-86 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ATC04_04330 63be4bdcb16dc6523b3a8f438ccf194b 353 Pfam PF00248 Aldo/keto reductase family 40 338 6.3E-71 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain ATC04_02515 c5ea111e892b208c7d966da13bc63f68 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_02515 c5ea111e892b208c7d966da13bc63f68 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_02515 c5ea111e892b208c7d966da13bc63f68 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 67 3.9E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_02515 c5ea111e892b208c7d966da13bc63f68 201 Gene3D G3DSA:1.10.357.10 19 199 5.7E-26 T 11-10-2018 ATC04_02515 c5ea111e892b208c7d966da13bc63f68 201 SUPERFAMILY SSF46689 18 80 7.48E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_16395 533cfd871f12188f4fa6d460d4eb88b9 230 Gene3D G3DSA:3.40.30.10 5 223 1.7E-75 T 11-10-2018 ATC04_16395 533cfd871f12188f4fa6d460d4eb88b9 230 Pfam PF01323 DSBA-like thioredoxin domain 17 219 5.7E-41 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 ATC04_16395 533cfd871f12188f4fa6d460d4eb88b9 230 SUPERFAMILY SSF52833 15 224 2.04E-43 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_07190 541cabbe62b3370fb381281ca425d42a 562 SUPERFAMILY SSF52540 291 536 4.4E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_07190 541cabbe62b3370fb381281ca425d42a 562 Pfam PF00005 ABC transporter 314 465 2.1E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_07190 541cabbe62b3370fb381281ca425d42a 562 ProSitePatterns PS00211 ABC transporters family signature. 437 451 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_07190 541cabbe62b3370fb381281ca425d42a 562 Gene3D G3DSA:3.40.50.300 13 287 1.1E-85 T 11-10-2018 ATC04_07190 541cabbe62b3370fb381281ca425d42a 562 Gene3D G3DSA:3.40.50.300 288 561 1.3E-79 T 11-10-2018 ATC04_07190 541cabbe62b3370fb381281ca425d42a 562 Pfam PF00005 ABC transporter 36 192 3.2E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_07190 541cabbe62b3370fb381281ca425d42a 562 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_07190 541cabbe62b3370fb381281ca425d42a 562 SMART SM00382 44 242 7.9E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_07190 541cabbe62b3370fb381281ca425d42a 562 SMART SM00382 322 531 4.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_07190 541cabbe62b3370fb381281ca425d42a 562 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 516 551 0.0049 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_07190 541cabbe62b3370fb381281ca425d42a 562 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 276 0.0046 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_07190 541cabbe62b3370fb381281ca425d42a 562 SUPERFAMILY SSF52540 15 264 1.05E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_17285 cc4bf030a5b252bb73f90aac62a8146a 197 Pfam PF11127 Protein of unknown function (DUF2892) 113 171 3.1E-9 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 ATC04_17285 cc4bf030a5b252bb73f90aac62a8146a 197 SMART SM00450 6 103 3.6E-19 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_17285 cc4bf030a5b252bb73f90aac62a8146a 197 Pfam PF00581 Rhodanese-like domain 9 99 1.9E-11 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_17285 cc4bf030a5b252bb73f90aac62a8146a 197 Gene3D G3DSA:3.40.250.10 4 121 3.3E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_17285 cc4bf030a5b252bb73f90aac62a8146a 197 SUPERFAMILY SSF52821 3 107 2.36E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_18225 1bbb596981fe8445dc9313ab10db54dd 208 Pfam PF03457 Helicase associated domain 68 126 2.3E-8 T 11-10-2018 IPR005114 Helicase-associated ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 Gene3D G3DSA:3.40.50.720 131 463 1.7E-114 T 11-10-2018 ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 2.5E-46 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 130 238 6.3E-22 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 131 462 1.5E-111 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 SUPERFAMILY SSF51735 130 304 3.89E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 SUPERFAMILY SSF55347 288 451 8.63E-54 T 11-10-2018 ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 Gene3D G3DSA:3.30.360.10 287 452 1.7E-114 T 11-10-2018 ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 3.4E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 3.4E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 3.4E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 407 422 3.4E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 3.4E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_10120 9ee949148ab1cc7f69c581187bdafd63 485 SMART SM00846 129 288 1.5E-55 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_06405 4e1283bab0894685e28efa4c1da625b5 501 SUPERFAMILY SSF51412 7 491 1.22E-112 T 11-10-2018 ATC04_06405 4e1283bab0894685e28efa4c1da625b5 501 Pfam PF00571 CBS domain 157 207 1.5E-5 T 11-10-2018 IPR000644 CBS domain ATC04_06405 4e1283bab0894685e28efa4c1da625b5 501 Pfam PF00571 CBS domain 96 141 3.3E-9 T 11-10-2018 IPR000644 CBS domain ATC04_06405 4e1283bab0894685e28efa4c1da625b5 501 SMART SM00116 99 147 2.1E-6 T 11-10-2018 IPR000644 CBS domain ATC04_06405 4e1283bab0894685e28efa4c1da625b5 501 SMART SM00116 163 211 1.1E-8 T 11-10-2018 IPR000644 CBS domain ATC04_06405 4e1283bab0894685e28efa4c1da625b5 501 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 11 468 5.4E-176 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ATC04_06405 4e1283bab0894685e28efa4c1da625b5 501 SMART SM01240 10 487 4.3E-297 T 11-10-2018 ATC04_06405 4e1283bab0894685e28efa4c1da625b5 501 Gene3D G3DSA:3.20.20.70 5 500 1.4E-201 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_06405 4e1283bab0894685e28efa4c1da625b5 501 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 11 500 80.99 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ATC04_06405 4e1283bab0894685e28efa4c1da625b5 501 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 11 487 1.0E-150 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 ATC04_06405 4e1283bab0894685e28efa4c1da625b5 501 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 302 314 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 ATC04_06405 4e1283bab0894685e28efa4c1da625b5 501 PIRSF PIRSF000130 3 501 3.4E-196 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ATC04_06405 4e1283bab0894685e28efa4c1da625b5 501 SUPERFAMILY SSF54631 66 208 1.26E-30 T 11-10-2018 ATC04_07705 4f83fae8244c7dc82eb6a8150164dd32 324 SUPERFAMILY SSF51430 1 316 4.32E-93 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ATC04_07705 4f83fae8244c7dc82eb6a8150164dd32 324 Pfam PF00248 Aldo/keto reductase family 16 314 1.4E-63 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain ATC04_07705 4f83fae8244c7dc82eb6a8150164dd32 324 Gene3D G3DSA:3.20.20.100 1 323 5.5E-106 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ATC04_14600 7a0a0f6034ce5825d77c4d2b4e9a38d0 345 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 1 315 3.2E-31 T 11-10-2018 ATC04_14600 7a0a0f6034ce5825d77c4d2b4e9a38d0 345 SUPERFAMILY SSF51905 1 340 9.5E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14600 7a0a0f6034ce5825d77c4d2b4e9a38d0 345 Gene3D G3DSA:3.50.50.60 1 343 4.8E-92 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_15075 df7753783209a0a2964d7ac223cd2b0c 123 SMART SM00418 22 101 4.3E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_15075 df7753783209a0a2964d7ac223cd2b0c 123 Pfam PF01022 Bacterial regulatory protein, arsR family 29 74 4.2E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_15075 df7753783209a0a2964d7ac223cd2b0c 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 3.0E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_15075 df7753783209a0a2964d7ac223cd2b0c 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 3.0E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_15075 df7753783209a0a2964d7ac223cd2b0c 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 3.0E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_15075 df7753783209a0a2964d7ac223cd2b0c 123 SUPERFAMILY SSF46785 18 89 1.87E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_15075 df7753783209a0a2964d7ac223cd2b0c 123 Gene3D G3DSA:1.10.10.10 5 111 3.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_13795 896b4f9c00c199687216fc033736de60 268 SUPERFAMILY SSF100950 1 253 6.28E-76 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_13795 896b4f9c00c199687216fc033736de60 268 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 126 144 - T 11-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 ATC04_13795 896b4f9c00c199687216fc033736de60 268 Gene3D G3DSA:3.40.50.1360 1 264 2.1E-81 T 11-10-2018 ATC04_13795 896b4f9c00c199687216fc033736de60 268 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 234 5.3E-14 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 ATC04_17965 fedb2e19cabd87f2fbf98816f4784ab6 74 Pfam PF12728 Helix-turn-helix domain 21 68 2.4E-6 T 11-10-2018 ATC04_17965 fedb2e19cabd87f2fbf98816f4784ab6 74 SUPERFAMILY SSF46955 19 67 4.94E-6 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_17965 fedb2e19cabd87f2fbf98816f4784ab6 74 Gene3D G3DSA:1.10.1660.10 14 68 2.1E-6 T 11-10-2018 ATC04_17075 6c7ff21bdb47a0adbca59602256dc560 167 SMART SM00347 48 150 1.1E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_17075 6c7ff21bdb47a0adbca59602256dc560 167 SUPERFAMILY SSF46785 24 162 2.56E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_17075 6c7ff21bdb47a0adbca59602256dc560 167 Gene3D G3DSA:1.10.10.10 24 166 4.5E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_17075 6c7ff21bdb47a0adbca59602256dc560 167 Pfam PF12802 MarR family 53 113 7.6E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_17075 6c7ff21bdb47a0adbca59602256dc560 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 106 3.2E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_17075 6c7ff21bdb47a0adbca59602256dc560 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 110 126 3.2E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_17075 6c7ff21bdb47a0adbca59602256dc560 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 90 3.2E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_17075 6c7ff21bdb47a0adbca59602256dc560 167 ProSitePatterns PS01117 MarR-type HTH domain signature. 89 123 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site ATC04_14470 5634e527351b45f5a08795d875daee19 111 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 1 96 6.0E-19 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14470 5634e527351b45f5a08795d875daee19 111 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 1 100 1.0E-24 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14470 5634e527351b45f5a08795d875daee19 111 SUPERFAMILY SSF81343 1 102 3.92E-23 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14470 5634e527351b45f5a08795d875daee19 111 Gene3D G3DSA:1.20.1300.10 1 105 6.3E-17 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14470 5634e527351b45f5a08795d875daee19 111 PIRSF PIRSF000178 1 106 2.6E-8 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_04665 39c7595d1ada1246df394b29776cfb36 642 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 73 159 2.8E-19 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_04665 39c7595d1ada1246df394b29776cfb36 642 Gene3D G3DSA:2.40.110.10 162 278 4.6E-123 T 11-10-2018 ATC04_04665 39c7595d1ada1246df394b29776cfb36 642 SUPERFAMILY SSF47203 279 438 3.38E-37 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_04665 39c7595d1ada1246df394b29776cfb36 642 SUPERFAMILY SSF56645 72 292 2.36E-54 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_04665 39c7595d1ada1246df394b29776cfb36 642 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 279 437 2.9E-32 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_04665 39c7595d1ada1246df394b29776cfb36 642 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 267 9.7E-18 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_04665 39c7595d1ada1246df394b29776cfb36 642 Gene3D G3DSA:1.10.540.10 48 161 4.6E-123 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_04665 39c7595d1ada1246df394b29776cfb36 642 Gene3D G3DSA:1.20.140.10 489 603 1.7E-16 T 11-10-2018 ATC04_04665 39c7595d1ada1246df394b29776cfb36 642 Gene3D G3DSA:1.20.140.10 279 435 4.6E-123 T 11-10-2018 ATC04_16480 f2845b1d8a18ae41f7633637e34ef5c8 564 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 488 3.3E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_16480 f2845b1d8a18ae41f7633637e34ef5c8 564 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 524 3.3E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_16480 f2845b1d8a18ae41f7633637e34ef5c8 564 Gene3D G3DSA:3.30.450.20 210 327 2.7E-12 T 11-10-2018 ATC04_16480 f2845b1d8a18ae41f7633637e34ef5c8 564 Gene3D G3DSA:3.30.565.10 397 550 1.6E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_16480 f2845b1d8a18ae41f7633637e34ef5c8 564 SUPERFAMILY SSF55890 338 392 1.03E-12 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 ATC04_16480 f2845b1d8a18ae41f7633637e34ef5c8 564 Pfam PF17203 Single cache domain 3 42 180 3.1E-19 T 11-10-2018 IPR033463 Single cache domain 3 ATC04_16480 f2845b1d8a18ae41f7633637e34ef5c8 564 SMART SM00387 434 548 3.1E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_16480 f2845b1d8a18ae41f7633637e34ef5c8 564 Gene3D G3DSA:1.10.287.130 329 387 2.5E-5 T 11-10-2018 ATC04_16480 f2845b1d8a18ae41f7633637e34ef5c8 564 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 437 535 7.1E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_16480 f2845b1d8a18ae41f7633637e34ef5c8 564 Gene3D G3DSA:3.30.450.20 38 182 6.9E-37 T 11-10-2018 ATC04_16480 f2845b1d8a18ae41f7633637e34ef5c8 564 SUPERFAMILY SSF103190 40 179 3.3E-23 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ATC04_16480 f2845b1d8a18ae41f7633637e34ef5c8 564 SUPERFAMILY SSF55874 403 549 2.36E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_16480 f2845b1d8a18ae41f7633637e34ef5c8 564 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 335 381 1.8E-12 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain ATC04_08765 c616f68c0d2c3a02a3c0653ee28b561e 299 Gene3D G3DSA:3.10.180.70 153 299 1.4E-36 T 11-10-2018 ATC04_08765 c616f68c0d2c3a02a3c0653ee28b561e 299 Gene3D G3DSA:3.10.180.70 1 149 4.5E-32 T 11-10-2018 ATC04_08765 c616f68c0d2c3a02a3c0653ee28b561e 299 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 153 271 9.4E-28 T 11-10-2018 IPR028973 PhnB-like ATC04_08765 c616f68c0d2c3a02a3c0653ee28b561e 299 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 141 1.2E-18 T 11-10-2018 IPR028973 PhnB-like ATC04_08765 c616f68c0d2c3a02a3c0653ee28b561e 299 SUPERFAMILY SSF54593 155 298 4.11E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_08765 c616f68c0d2c3a02a3c0653ee28b561e 299 SUPERFAMILY SSF54593 3 143 6.11E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_11955 14094bb1e21ac7b2b34763ccbcaa08b5 86 TIGRFAM TIGR03988 antisig_RsrA: mycothiol system anti-sigma-R factor 8 83 4.2E-26 T 11-10-2018 IPR024020 Anti sigma-R factor, mycothiol system,RsrA ATC04_11955 14094bb1e21ac7b2b34763ccbcaa08b5 86 Pfam PF13490 Putative zinc-finger 16 44 5.1E-10 T 11-10-2018 IPR027383 Putative zinc-finger ATC04_11955 14094bb1e21ac7b2b34763ccbcaa08b5 86 Gene3D G3DSA:1.10.10.1320 15 84 5.0E-5 T 11-10-2018 ATC04_11955 14094bb1e21ac7b2b34763ccbcaa08b5 86 TIGRFAM TIGR02949 anti_SigH_actin: anti-sigma factor, TIGR02949 family 2 82 4.6E-27 T 11-10-2018 IPR014295 Anti-sigma factor ATC04_01540 8f694385d6d7ccbf041659b794339a4a 393 Pfam PF01613 Flavin reductase like domain 24 166 2.3E-37 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ATC04_01540 8f694385d6d7ccbf041659b794339a4a 393 Gene3D G3DSA:3.30.450.40 189 301 1.3E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_01540 8f694385d6d7ccbf041659b794339a4a 393 Gene3D G3DSA:2.30.110.10 13 182 5.0E-51 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ATC04_01540 8f694385d6d7ccbf041659b794339a4a 393 SUPERFAMILY SSF50475 15 168 7.36E-48 T 11-10-2018 ATC04_01540 8f694385d6d7ccbf041659b794339a4a 393 SMART SM00903 23 167 2.0E-57 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ATC04_01540 8f694385d6d7ccbf041659b794339a4a 393 SUPERFAMILY SSF55781 193 389 1.32E-7 T 11-10-2018 ATC04_04060 dc1c1d506a98dbffb5772278cae24323 346 Gene3D G3DSA:3.30.420.40 179 337 4.0E-15 T 11-10-2018 ATC04_04060 dc1c1d506a98dbffb5772278cae24323 346 Gene3D G3DSA:3.30.420.40 67 175 3.1E-7 T 11-10-2018 ATC04_04060 dc1c1d506a98dbffb5772278cae24323 346 Pfam PF00480 ROK family 75 225 3.3E-11 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ATC04_04060 dc1c1d506a98dbffb5772278cae24323 346 SUPERFAMILY SSF46785 5 84 1.29E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_04060 dc1c1d506a98dbffb5772278cae24323 346 Pfam PF12802 MarR family 8 58 2.6E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04060 dc1c1d506a98dbffb5772278cae24323 346 Gene3D G3DSA:1.10.10.10 6 66 5.9E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_04060 dc1c1d506a98dbffb5772278cae24323 346 SUPERFAMILY SSF53067 72 335 1.97E-24 T 11-10-2018 ATC04_02930 9b21a53ee2af9031a1e3648e535ac019 341 Pfam PF04960 Glutaminase 49 333 2.2E-109 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 ATC04_02930 9b21a53ee2af9031a1e3648e535ac019 341 Hamap MF_00313 Glutaminase [glsA]. 31 333 41.561 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 ATC04_02930 9b21a53ee2af9031a1e3648e535ac019 341 SUPERFAMILY SSF56601 31 333 8.06E-105 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ATC04_02930 9b21a53ee2af9031a1e3648e535ac019 341 TIGRFAM TIGR03814 Gln_ase: glutaminase A 42 333 5.1E-109 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 ATC04_02930 9b21a53ee2af9031a1e3648e535ac019 341 Gene3D G3DSA:3.40.710.10 27 335 3.1E-116 T 11-10-2018 ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 Gene3D G3DSA:3.30.565.10 337 498 5.9E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 Gene3D G3DSA:1.10.287.130 263 334 2.8E-21 T 11-10-2018 ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 495 3.5E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 Gene3D G3DSA:1.20.1480.50 171 262 1.1E-11 T 11-10-2018 ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 495 1.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 451 1.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 1.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 476 1.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 SUPERFAMILY SSF55874 323 500 4.85E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 333 7.3E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 SUPERFAMILY SSF158472 209 256 6.8E-8 T 11-10-2018 ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 SMART SM00304 206 259 1.8E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 Pfam PF00672 HAMP domain 207 255 2.8E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 SMART SM00387 381 498 1.9E-40 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 SUPERFAMILY SSF47384 252 334 3.92E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ATC04_15300 45484efe47d1eaf88724774342ac2c51 516 SMART SM00388 267 334 1.3E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_14500 c18cd7a0fdf26b2b457efd12be3387af 270 SUPERFAMILY SSF56219 8 269 3.53E-68 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ATC04_14500 c18cd7a0fdf26b2b457efd12be3387af 270 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 8 268 2.4E-62 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 ATC04_14500 c18cd7a0fdf26b2b457efd12be3387af 270 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 9 266 4.6E-58 T 11-10-2018 ATC04_14500 c18cd7a0fdf26b2b457efd12be3387af 270 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 11 261 6.9E-22 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ATC04_14500 c18cd7a0fdf26b2b457efd12be3387af 270 Gene3D G3DSA:3.60.10.10 6 270 3.3E-72 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ATC04_13905 80acaea84cd56322c787b3d875f0bb72 213 Gene3D G3DSA:3.90.950.10 9 210 5.8E-57 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ATC04_13905 80acaea84cd56322c787b3d875f0bb72 213 Pfam PF02545 Maf-like protein 10 202 1.8E-44 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 ATC04_13905 80acaea84cd56322c787b3d875f0bb72 213 PIRSF PIRSF006305 5 210 2.8E-42 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 ATC04_13905 80acaea84cd56322c787b3d875f0bb72 213 SUPERFAMILY SSF52972 9 202 2.29E-47 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ATC04_13905 80acaea84cd56322c787b3d875f0bb72 213 TIGRFAM TIGR00172 maf: septum formation protein Maf 9 201 2.9E-43 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 ATC04_13905 80acaea84cd56322c787b3d875f0bb72 213 Hamap MF_00528 Septum formation protein Maf [maf]. 10 208 26.749 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 ATC04_01560 58294ce7214c45f69a3d580ce9d29b42 266 Pfam PF01614 Bacterial transcriptional regulator 138 256 3.5E-21 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ATC04_01560 58294ce7214c45f69a3d580ce9d29b42 266 SUPERFAMILY SSF55781 77 258 3.47E-36 T 11-10-2018 ATC04_01560 58294ce7214c45f69a3d580ce9d29b42 266 Gene3D G3DSA:3.30.450.40 91 262 9.3E-43 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_01560 58294ce7214c45f69a3d580ce9d29b42 266 SMART SM00346 21 109 0.0071 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_01560 58294ce7214c45f69a3d580ce9d29b42 266 Gene3D G3DSA:1.10.10.10 12 85 9.6E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_01560 58294ce7214c45f69a3d580ce9d29b42 266 SUPERFAMILY SSF46785 24 85 1.39E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_01560 58294ce7214c45f69a3d580ce9d29b42 266 Pfam PF09339 IclR helix-turn-helix domain 24 72 5.2E-12 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_07700 c97d4175769cd40f8be016164346f2b1 475 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 2.7E-138 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATC04_07700 c97d4175769cd40f8be016164346f2b1 475 Pfam PF00764 Arginosuccinate synthase 16 391 3.5E-55 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATC04_07700 c97d4175769cd40f8be016164346f2b1 475 SUPERFAMILY SSF52402 4 185 2.44E-33 T 11-10-2018 ATC04_07700 c97d4175769cd40f8be016164346f2b1 475 Gene3D G3DSA:1.10.287.400 377 441 1.1E-28 T 11-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATC04_07700 c97d4175769cd40f8be016164346f2b1 475 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATC04_07700 c97d4175769cd40f8be016164346f2b1 475 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATC04_07700 c97d4175769cd40f8be016164346f2b1 475 Gene3D G3DSA:3.90.1260.10 74 367 2.2E-113 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATC04_07700 c97d4175769cd40f8be016164346f2b1 475 Gene3D G3DSA:3.40.50.620 14 191 2.2E-113 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_07700 c97d4175769cd40f8be016164346f2b1 475 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 462 72.332 T 11-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATC04_07700 c97d4175769cd40f8be016164346f2b1 475 SUPERFAMILY SSF69864 190 435 9.42E-73 T 11-10-2018 ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 SUPERFAMILY SSF47819 626 705 9.16E-22 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 Pfam PF00570 HRDC domain 636 702 1.5E-21 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 SUPERFAMILY SSF52540 8 585 8.17E-121 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 Gene3D G3DSA:1.10.10.160 114 197 7.0E-68 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 Gene3D G3DSA:3.40.50.300 16 281 7.0E-68 T 11-10-2018 ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 Pfam PF13361 UvrD-like helicase C-terminal domain 452 563 1.1E-23 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 Gene3D G3DSA:1.10.150.80 634 705 1.0E-23 T 11-10-2018 ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 Pfam PF13245 AAA domain 20 264 4.7E-36 T 11-10-2018 ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 Pfam PF13361 UvrD-like helicase C-terminal domain 286 421 2.6E-19 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 Gene3D G3DSA:3.40.50.300 496 581 1.5E-33 T 11-10-2018 ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 Gene3D G3DSA:3.40.50.300 291 400 7.4E-29 T 11-10-2018 ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 Gene3D G3DSA:1.10.486.10 401 423 7.4E-29 T 11-10-2018 ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 SMART SM00341 632 706 3.4E-12 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 ATC04_07010 420b9b5e677ac46a866b5130bc6ae2e1 707 Gene3D G3DSA:1.10.486.10 427 493 1.5E-33 T 11-10-2018 ATC04_06030 463805f077b84dbdc5b58417046cad38 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 11 68 1.6E-28 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal ATC04_06030 463805f077b84dbdc5b58417046cad38 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 128 143 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06030 463805f077b84dbdc5b58417046cad38 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 7 143 30.815 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ATC04_06030 463805f077b84dbdc5b58417046cad38 143 Gene3D G3DSA:3.30.1550.10 4 73 2.2E-33 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily ATC04_06030 463805f077b84dbdc5b58417046cad38 143 SUPERFAMILY SSF46906 69 142 2.09E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily ATC04_06030 463805f077b84dbdc5b58417046cad38 143 SMART SM00649 11 142 1.9E-81 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ATC04_06030 463805f077b84dbdc5b58417046cad38 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 38 75 3.0E-16 T 11-10-2018 ATC04_06030 463805f077b84dbdc5b58417046cad38 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 5 142 1.3E-61 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06030 463805f077b84dbdc5b58417046cad38 143 Gene3D G3DSA:1.10.10.250 74 142 1.7E-29 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily ATC04_06030 463805f077b84dbdc5b58417046cad38 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 73 141 1.5E-24 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 ATC04_06030 463805f077b84dbdc5b58417046cad38 143 SUPERFAMILY SSF54747 4 74 1.57E-29 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily ATC04_17005 36a6c0a84a201aa861b2aac8cfe71a94 401 SUPERFAMILY SSF51261 110 240 2.72E-45 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_17005 36a6c0a84a201aa861b2aac8cfe71a94 401 Pfam PF01551 Peptidase family M23 142 236 1.8E-23 T 11-10-2018 IPR016047 Peptidase M23 ATC04_17005 36a6c0a84a201aa861b2aac8cfe71a94 401 Gene3D G3DSA:2.70.70.10 88 242 1.5E-41 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 Gene3D G3DSA:3.40.50.300 893 1109 4.5E-53 T 11-10-2018 ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 SUPERFAMILY SSF90123 583 837 6.8E-21 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 Pfam PF00664 ABC transporter transmembrane region 18 279 5.2E-16 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 Pfam PF00664 ABC transporter transmembrane region 595 805 6.1E-9 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 Gene3D G3DSA:1.20.1560.10 10 320 2.0E-24 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 Gene3D G3DSA:1.20.1560.10 554 876 2.9E-10 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 Pfam PF00005 ABC transporter 912 1064 3.7E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 Pfam PF00005 ABC transporter 351 487 2.6E-7 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 SUPERFAMILY SSF90123 14 314 3.79E-29 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 583 1093 1.1E-109 T 11-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 SUPERFAMILY SSF52540 894 1101 7.91E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 SMART SM00382 920 1112 6.8E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 SMART SM00382 358 531 2.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 SUPERFAMILY SSF52540 322 519 1.99E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_07545 096e5f6ab0b77295d1f1e2e9bf613561 1114 Gene3D G3DSA:3.40.50.300 330 540 2.1E-30 T 11-10-2018 ATC04_09100 4949d477c5b986cacb7413cc2a417e89 330 SUPERFAMILY SSF56300 27 243 7.59E-31 T 11-10-2018 ATC04_09100 4949d477c5b986cacb7413cc2a417e89 330 Gene3D G3DSA:3.60.21.10 61 257 9.3E-9 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ATC04_09100 4949d477c5b986cacb7413cc2a417e89 330 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 1 243 1.7E-58 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA ATC04_09100 4949d477c5b986cacb7413cc2a417e89 330 SMART SM00854 1 245 2.2E-59 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 Gene3D G3DSA:1.10.150.20 164 236 1.6E-85 T 11-10-2018 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 1 159 9.5E-45 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 SUPERFAMILY SSF47807 161 274 1.33E-31 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 SMART SM00482 626 833 1.2E-100 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 SUPERFAMILY SSF88723 2 143 1.57E-44 T 11-10-2018 IPR029060 PIN-like domain superfamily ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 Pfam PF00476 DNA polymerase family A 492 867 2.2E-133 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 PRINTS PR00868 DNA-polymerase family A (pol I) signature 786 802 3.6E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 PRINTS PR00868 DNA-polymerase family A (pol I) signature 641 664 3.6E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 PRINTS PR00868 DNA-polymerase family A (pol I) signature 595 617 3.6E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 PRINTS PR00868 DNA-polymerase family A (pol I) signature 695 720 3.6E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 PRINTS PR00868 DNA-polymerase family A (pol I) signature 618 633 3.6E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 743 3.6E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 PRINTS PR00868 DNA-polymerase family A (pol I) signature 671 684 3.6E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 765 3.6E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 PRINTS PR00868 DNA-polymerase family A (pol I) signature 816 829 3.6E-71 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 161 255 6.0E-28 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 Gene3D G3DSA:3.30.70.370 604 865 1.2E-95 T 11-10-2018 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 ProSitePatterns PS00447 DNA polymerase family A signature. 695 714 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 SMART SM00279 163 198 2.2E-11 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 Gene3D G3DSA:1.20.1060.10 484 598 1.3E-30 T 11-10-2018 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 SMART SM00475 1 251 1.9E-102 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 Pfam PF01612 3'-5' exonuclease 331 417 1.3E-5 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 SUPERFAMILY SSF56672 465 868 2.56E-131 T 11-10-2018 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 Gene3D G3DSA:1.10.150.20 650 793 1.2E-95 T 11-10-2018 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 Gene3D G3DSA:3.30.420.10 316 482 2.4E-30 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 SMART SM00474 294 459 9.2E-5 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 TIGRFAM TIGR00593 pola: DNA polymerase I 1 868 3.3E-275 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 SUPERFAMILY SSF53098 320 459 2.73E-23 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_07985 4c4ffb92137bbef391f57b1bfc4e3e45 870 Gene3D G3DSA:3.40.50.1010 1 267 1.6E-85 T 11-10-2018 ATC04_07960 dc38f06361bda23d3635f23433a04a3a 205 SMART SM01012 146 201 1.6E-22 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 ATC04_07960 dc38f06361bda23d3635f23433a04a3a 205 SUPERFAMILY SSF52172 18 201 1.2E-54 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_07960 dc38f06361bda23d3635f23433a04a3a 205 SMART SM00448 19 130 9.5E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_07960 dc38f06361bda23d3635f23433a04a3a 205 Gene3D G3DSA:1.10.10.10 148 205 3.2E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_07960 dc38f06361bda23d3635f23433a04a3a 205 PIRSF PIRSF036382 10 205 5.6E-69 T 11-10-2018 IPR008327 Signal transduction response regulator, antiterminator ATC04_07960 dc38f06361bda23d3635f23433a04a3a 205 Pfam PF03861 ANTAR domain 150 201 2.3E-19 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 ATC04_07960 dc38f06361bda23d3635f23433a04a3a 205 Gene3D G3DSA:3.40.50.2300 9 147 6.8E-39 T 11-10-2018 ATC04_07960 dc38f06361bda23d3635f23433a04a3a 205 Pfam PF00072 Response regulator receiver domain 21 130 1.2E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_02665 a445343c58bd3dc558019386923af2be 279 Gene3D G3DSA:1.10.3720.10 56 266 2.4E-24 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_02665 a445343c58bd3dc558019386923af2be 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 262 8.6E-29 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_02665 a445343c58bd3dc558019386923af2be 279 SUPERFAMILY SSF161098 62 248 9.03E-25 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_04670 f06ba5b58d87ce8d29578fa119eb18e9 350 Pfam PF06114 IrrE N-terminal-like domain 150 250 2.6E-10 T 11-10-2018 IPR010359 IrrE N-terminal-like domain ATC04_04670 f06ba5b58d87ce8d29578fa119eb18e9 350 SUPERFAMILY SSF47413 4 60 6.88E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_02450 2aec56337489b76b8941d66f7afb6273 216 Gene3D G3DSA:3.30.1360.20 3 97 3.0E-18 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 ATC04_02450 2aec56337489b76b8941d66f7afb6273 216 SUPERFAMILY SSF55248 7 96 1.44E-18 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 ATC04_02450 2aec56337489b76b8941d66f7afb6273 216 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 8 94 4.8E-20 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 ATC04_02450 2aec56337489b76b8941d66f7afb6273 216 Gene3D G3DSA:3.10.180.10 103 216 2.1E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_09245 7ed1b478977906188e777f350c9432be 186 SMART SM00841 129 184 1.9E-30 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ATC04_09245 7ed1b478977906188e777f350c9432be 186 Gene3D G3DSA:2.40.50.140 64 127 1.1E-22 T 11-10-2018 ATC04_09245 7ed1b478977906188e777f350c9432be 186 SUPERFAMILY SSF50104 3 63 6.52E-21 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily ATC04_09245 7ed1b478977906188e777f350c9432be 186 SUPERFAMILY SSF50249 129 185 8.39E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_09245 7ed1b478977906188e777f350c9432be 186 Gene3D G3DSA:2.30.30.30 1 62 1.0E-27 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 ATC04_09245 7ed1b478977906188e777f350c9432be 186 TIGRFAM TIGR00038 efp: translation elongation factor P 3 185 1.7E-74 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 ATC04_09245 7ed1b478977906188e777f350c9432be 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 6.7E-27 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like ATC04_09245 7ed1b478977906188e777f350c9432be 186 SUPERFAMILY SSF50249 65 126 1.88E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_09245 7ed1b478977906188e777f350c9432be 186 SMART SM01185 67 121 3.7E-26 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ATC04_09245 7ed1b478977906188e777f350c9432be 186 Pfam PF09285 Elongation factor P, C-terminal 129 184 2.4E-24 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ATC04_09245 7ed1b478977906188e777f350c9432be 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 121 4.5E-20 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ATC04_09245 7ed1b478977906188e777f350c9432be 186 PIRSF PIRSF005901 1 186 2.4E-64 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP ATC04_09245 7ed1b478977906188e777f350c9432be 186 Hamap MF_00141 Elongation factor P [efp]. 1 185 46.929 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 ATC04_09245 7ed1b478977906188e777f350c9432be 186 Gene3D G3DSA:2.40.50.140 128 186 6.1E-26 T 11-10-2018 ATC04_12900 bbddcc959ba894695c5839b29cbcf592 422 SUPERFAMILY SSF103473 26 403 4.58E-49 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_12900 bbddcc959ba894695c5839b29cbcf592 422 Pfam PF07690 Major Facilitator Superfamily 29 357 3.0E-31 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_12900 bbddcc959ba894695c5839b29cbcf592 422 Gene3D G3DSA:1.20.1250.20 16 404 3.6E-41 T 11-10-2018 ATC04_06355 f006ee3ea2fe1e6272eaa59524c8d2ba 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 9 22 4.7E-51 T 11-10-2018 IPR017861 Kae1/TsaD family ATC04_06355 f006ee3ea2fe1e6272eaa59524c8d2ba 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 4.7E-51 T 11-10-2018 IPR017861 Kae1/TsaD family ATC04_06355 f006ee3ea2fe1e6272eaa59524c8d2ba 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 4.7E-51 T 11-10-2018 IPR017861 Kae1/TsaD family ATC04_06355 f006ee3ea2fe1e6272eaa59524c8d2ba 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 4.7E-51 T 11-10-2018 IPR017861 Kae1/TsaD family ATC04_06355 f006ee3ea2fe1e6272eaa59524c8d2ba 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 281 290 4.7E-51 T 11-10-2018 IPR017861 Kae1/TsaD family ATC04_06355 f006ee3ea2fe1e6272eaa59524c8d2ba 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 159 180 4.7E-51 T 11-10-2018 IPR017861 Kae1/TsaD family ATC04_06355 f006ee3ea2fe1e6272eaa59524c8d2ba 357 Gene3D G3DSA:3.30.420.40 133 311 1.6E-111 T 11-10-2018 ATC04_06355 f006ee3ea2fe1e6272eaa59524c8d2ba 357 Gene3D G3DSA:3.30.420.40 8 331 1.6E-111 T 11-10-2018 ATC04_06355 f006ee3ea2fe1e6272eaa59524c8d2ba 357 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 9 324 4.6E-99 T 11-10-2018 IPR017861 Kae1/TsaD family ATC04_06355 f006ee3ea2fe1e6272eaa59524c8d2ba 357 SUPERFAMILY SSF53067 8 324 1.86E-37 T 11-10-2018 ATC04_06355 f006ee3ea2fe1e6272eaa59524c8d2ba 357 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 8 330 7.7E-122 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 ATC04_06355 f006ee3ea2fe1e6272eaa59524c8d2ba 357 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 6 350 58.637 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 ATC04_06355 f006ee3ea2fe1e6272eaa59524c8d2ba 357 Pfam PF00814 Glycoprotease family 28 324 2.1E-90 T 11-10-2018 IPR000905 Gcp-like domain ATC04_04395 1b578c42e033c6545b2ed9ac4ca48005 245 Gene3D G3DSA:3.40.50.300 10 242 1.3E-60 T 11-10-2018 ATC04_04395 1b578c42e033c6545b2ed9ac4ca48005 245 SMART SM00382 36 229 5.6E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04395 1b578c42e033c6545b2ed9ac4ca48005 245 SUPERFAMILY SSF52540 11 231 3.0E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_04395 1b578c42e033c6545b2ed9ac4ca48005 245 Pfam PF00005 ABC transporter 27 180 1.4E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_11180 d3e556a9f1237bdd651c1650d45f38df 618 SUPERFAMILY SSF53850 57 604 3.26E-88 T 11-10-2018 ATC04_11180 d3e556a9f1237bdd651c1650d45f38df 618 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 101 534 1.4E-49 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ATC04_11180 d3e556a9f1237bdd651c1650d45f38df 618 Gene3D G3DSA:3.10.105.10 372 586 5.4E-59 T 11-10-2018 ATC04_11180 d3e556a9f1237bdd651c1650d45f38df 618 Gene3D G3DSA:3.40.190.10 66 86 4.8E-29 T 11-10-2018 ATC04_11180 d3e556a9f1237bdd651c1650d45f38df 618 Gene3D G3DSA:3.40.190.10 287 599 5.4E-59 T 11-10-2018 ATC04_11180 d3e556a9f1237bdd651c1650d45f38df 618 PIRSF PIRSF002741 11 612 8.8E-66 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ATC04_11180 d3e556a9f1237bdd651c1650d45f38df 618 Gene3D G3DSA:3.90.76.10 87 185 4.8E-29 T 11-10-2018 ATC04_11180 d3e556a9f1237bdd651c1650d45f38df 618 Gene3D G3DSA:3.90.76.10 223 286 5.4E-59 T 11-10-2018 ATC04_03450 5e48bf12b04e3e5f2a2074aabc2d4c6d 127 Gene3D G3DSA:1.10.10.10 1 122 1.5E-40 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03450 5e48bf12b04e3e5f2a2074aabc2d4c6d 127 SUPERFAMILY SSF46785 8 120 1.68E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03450 5e48bf12b04e3e5f2a2074aabc2d4c6d 127 Pfam PF01638 HxlR-like helix-turn-helix 23 109 2.5E-23 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type ATC04_02280 0b7dc921f0458ba2923a3be15066e59c 659 Pfam PF02538 Hydantoinase B/oxoprolinase 14 539 5.3E-143 T 11-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 ATC04_09035 54f435433d1489286f16bc635c76087f 309 SMART SM00382 32 218 1.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_09035 54f435433d1489286f16bc635c76087f 309 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_09035 54f435433d1489286f16bc635c76087f 309 Pfam PF00005 ABC transporter 24 162 8.1E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_09035 54f435433d1489286f16bc635c76087f 309 Gene3D G3DSA:3.40.50.300 2 235 2.0E-56 T 11-10-2018 ATC04_09035 54f435433d1489286f16bc635c76087f 309 SUPERFAMILY SSF52540 6 222 4.47E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16610 d9f08af055f9c5c0f1dd781f3607f70f 138 Gene3D G3DSA:3.40.50.720 4 138 1.1E-31 T 11-10-2018 ATC04_16610 d9f08af055f9c5c0f1dd781f3607f70f 138 Pfam PF13380 CoA binding domain 21 135 1.3E-32 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ATC04_16610 d9f08af055f9c5c0f1dd781f3607f70f 138 SMART SM00881 16 109 2.0E-12 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ATC04_16610 d9f08af055f9c5c0f1dd781f3607f70f 138 SUPERFAMILY SSF51735 9 137 5.73E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01675 000d9d1fb19ddb290c3d929816437257 404 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 43 152 2.3E-27 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATC04_01675 000d9d1fb19ddb290c3d929816437257 404 SUPERFAMILY SSF51735 171 361 4.04E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01675 000d9d1fb19ddb290c3d929816437257 404 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 2 402 3.0E-223 T 11-10-2018 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 ATC04_01675 000d9d1fb19ddb290c3d929816437257 404 Gene3D G3DSA:3.90.180.10 43 387 1.1E-129 T 11-10-2018 ATC04_01675 000d9d1fb19ddb290c3d929816437257 404 SUPERFAMILY SSF50129 3 194 6.02E-59 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_01675 000d9d1fb19ddb290c3d929816437257 404 Gene3D G3DSA:3.40.50.720 186 350 1.1E-129 T 11-10-2018 ATC04_01675 000d9d1fb19ddb290c3d929816437257 404 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 194 256 1.1E-6 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ATC04_01675 000d9d1fb19ddb290c3d929816437257 404 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 75 89 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ATC04_00335 abd0e366bd46987aba32e10097ffff93 485 Pfam PF00854 POT family 93 450 3.8E-56 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 ATC04_00335 abd0e366bd46987aba32e10097ffff93 485 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 ATC04_00335 abd0e366bd46987aba32e10097ffff93 485 Gene3D G3DSA:1.20.1250.20 2 485 3.3E-124 T 11-10-2018 ATC04_00335 abd0e366bd46987aba32e10097ffff93 485 SUPERFAMILY SSF103473 8 475 1.05E-30 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_00335 abd0e366bd46987aba32e10097ffff93 485 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 13 481 1.3E-138 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 ATC04_05710 5fee82350bd0894ccff46af9ecb62731 415 Pfam PF00772 DnaB-like helicase N terminal domain 3 97 1.5E-5 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 ATC04_05710 5fee82350bd0894ccff46af9ecb62731 415 Gene3D G3DSA:1.10.860.10 1 147 1.5E-12 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ATC04_05710 5fee82350bd0894ccff46af9ecb62731 415 SUPERFAMILY SSF48024 3 105 3.01E-8 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 ATC04_05710 5fee82350bd0894ccff46af9ecb62731 415 Gene3D G3DSA:3.40.50.300 154 415 7.4E-72 T 11-10-2018 ATC04_05710 5fee82350bd0894ccff46af9ecb62731 415 Pfam PF03796 DnaB-like helicase C terminal domain 169 413 2.6E-62 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 ATC04_05710 5fee82350bd0894ccff46af9ecb62731 415 SUPERFAMILY SSF52540 168 409 6.43E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_00960 6515dd49b0aae2500505018895eac5fc 150 SUPERFAMILY SSF46785 4 142 2.35E-34 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_00960 6515dd49b0aae2500505018895eac5fc 150 Pfam PF01047 MarR family 39 96 5.1E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_00960 6515dd49b0aae2500505018895eac5fc 150 SMART SM00347 32 130 6.1E-21 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_00960 6515dd49b0aae2500505018895eac5fc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 2.9E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_00960 6515dd49b0aae2500505018895eac5fc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 2.9E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_00960 6515dd49b0aae2500505018895eac5fc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 2.9E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_00960 6515dd49b0aae2500505018895eac5fc 150 Gene3D G3DSA:1.10.10.10 4 143 2.8E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_06225 4afe3a99a46e15f06e871a87ab481a57 190 SUPERFAMILY SSF52540 4 187 1.52E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06225 4afe3a99a46e15f06e871a87ab481a57 190 PRINTS PR00094 Adenylate kinase signature 33 47 4.9E-31 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ATC04_06225 4afe3a99a46e15f06e871a87ab481a57 190 PRINTS PR00094 Adenylate kinase signature 134 149 4.9E-31 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ATC04_06225 4afe3a99a46e15f06e871a87ab481a57 190 PRINTS PR00094 Adenylate kinase signature 82 98 4.9E-31 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ATC04_06225 4afe3a99a46e15f06e871a87ab481a57 190 PRINTS PR00094 Adenylate kinase signature 5 18 4.9E-31 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ATC04_06225 4afe3a99a46e15f06e871a87ab481a57 190 PRINTS PR00094 Adenylate kinase signature 151 165 4.9E-31 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ATC04_06225 4afe3a99a46e15f06e871a87ab481a57 190 Pfam PF00406 Adenylate kinase 6 164 7.2E-50 T 11-10-2018 ATC04_06225 4afe3a99a46e15f06e871a87ab481a57 190 Gene3D G3DSA:3.40.50.300 1 189 7.1E-60 T 11-10-2018 ATC04_06225 4afe3a99a46e15f06e871a87ab481a57 190 Hamap MF_00235 Adenylate kinase [adk]. 2 187 41.712 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ATC04_06225 4afe3a99a46e15f06e871a87ab481a57 190 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ATC04_01150 967e1bdc6d1e70800f4bc5ca14f35dd8 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 77 3.4E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01150 967e1bdc6d1e70800f4bc5ca14f35dd8 209 Gene3D G3DSA:1.10.10.60 16 69 1.8E-20 T 11-10-2018 ATC04_01150 967e1bdc6d1e70800f4bc5ca14f35dd8 209 Gene3D G3DSA:1.10.357.10 70 206 8.0E-25 T 11-10-2018 ATC04_01150 967e1bdc6d1e70800f4bc5ca14f35dd8 209 SUPERFAMILY SSF48498 91 202 5.78E-18 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_01150 967e1bdc6d1e70800f4bc5ca14f35dd8 209 SUPERFAMILY SSF46689 21 79 3.19E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_01150 967e1bdc6d1e70800f4bc5ca14f35dd8 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 44 8.0E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01150 967e1bdc6d1e70800f4bc5ca14f35dd8 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 52 75 8.0E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01150 967e1bdc6d1e70800f4bc5ca14f35dd8 209 Pfam PF16859 Bacterial transcriptional repressor C-terminal 88 197 3.4E-23 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 Gene3D G3DSA:3.40.50.300 3 276 4.9E-137 T 11-10-2018 ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 SUPERFAMILY SSF52540 3 299 8.69E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 Pfam PF06071 Protein of unknown function (DUF933) 277 360 3.7E-38 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 SUPERFAMILY SSF81271 277 361 7.85E-35 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 3 361 5.0E-127 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 PIRSF PIRSF006641 1 361 1.5E-139 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.8E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.8E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.8E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.8E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 Gene3D G3DSA:1.10.150.300 113 200 4.9E-137 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 Pfam PF01926 50S ribosome-binding GTPase 5 127 9.8E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 361 41.198 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ATC04_06530 07a167e79854fbe1eb073e7c3727ce82 361 Gene3D G3DSA:3.10.20.30 48 359 4.9E-137 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ATC04_05245 a9272772b8c1995071d844cc404fcbd9 389 PRINTS PR01270 Histone deacetylase superfamily signature 244 254 1.1E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ATC04_05245 a9272772b8c1995071d844cc404fcbd9 389 PRINTS PR01270 Histone deacetylase superfamily signature 158 173 1.1E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ATC04_05245 a9272772b8c1995071d844cc404fcbd9 389 PRINTS PR01270 Histone deacetylase superfamily signature 125 148 1.1E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ATC04_05245 a9272772b8c1995071d844cc404fcbd9 389 Gene3D G3DSA:3.40.800.20 1 351 8.0E-98 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ATC04_05245 a9272772b8c1995071d844cc404fcbd9 389 SUPERFAMILY SSF52768 2 358 6.23E-97 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily ATC04_05245 a9272772b8c1995071d844cc404fcbd9 389 PRINTS PR01272 Acetoin utilisation ACUC protein signature 81 95 1.8E-11 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 ATC04_05245 a9272772b8c1995071d844cc404fcbd9 389 PRINTS PR01272 Acetoin utilisation ACUC protein signature 102 115 1.8E-11 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 ATC04_05245 a9272772b8c1995071d844cc404fcbd9 389 PRINTS PR01272 Acetoin utilisation ACUC protein signature 11 31 1.8E-11 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 ATC04_05245 a9272772b8c1995071d844cc404fcbd9 389 Pfam PF00850 Histone deacetylase domain 17 314 1.7E-73 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ATC04_06170 aa2b2658c848f89053cc11103b522f62 302 SUPERFAMILY SSF56219 81 298 4.84E-28 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ATC04_06170 aa2b2658c848f89053cc11103b522f62 302 Gene3D G3DSA:3.60.10.10 81 301 2.0E-31 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ATC04_06170 aa2b2658c848f89053cc11103b522f62 302 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 86 291 5.3E-13 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ATC04_16820 3ab1faa7db96143d699d91b1e3bf7227 433 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 ATC04_16820 3ab1faa7db96143d699d91b1e3bf7227 433 Gene3D G3DSA:3.40.50.300 147 400 1.7E-77 T 11-10-2018 ATC04_16820 3ab1faa7db96143d699d91b1e3bf7227 433 Gene3D G3DSA:1.10.8.60 322 396 1.7E-77 T 11-10-2018 ATC04_16820 3ab1faa7db96143d699d91b1e3bf7227 433 Pfam PF14561 Tetratricopeptide repeat 6 52 1.5E-5 T 11-10-2018 ATC04_16820 3ab1faa7db96143d699d91b1e3bf7227 433 SUPERFAMILY SSF48452 7 65 2.07E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_16820 3ab1faa7db96143d699d91b1e3bf7227 433 SUPERFAMILY SSF52540 146 400 3.29E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16820 3ab1faa7db96143d699d91b1e3bf7227 433 Gene3D G3DSA:1.25.40.10 2 68 1.8E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_16820 3ab1faa7db96143d699d91b1e3bf7227 433 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 319 1.8E-36 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ATC04_16820 3ab1faa7db96143d699d91b1e3bf7227 433 SMART SM00382 184 323 6.1E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_05335 5923d92f70e551de08b42be8b447131b 448 SUPERFAMILY SSF103473 9 422 4.32E-66 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_05335 5923d92f70e551de08b42be8b447131b 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_05335 5923d92f70e551de08b42be8b447131b 448 Pfam PF07690 Major Facilitator Superfamily 19 375 1.1E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_05335 5923d92f70e551de08b42be8b447131b 448 Gene3D G3DSA:1.20.1250.20 11 432 1.5E-66 T 11-10-2018 ATC04_11905 0875be87e357e7842f61b6dd365f8f23 246 Pfam PF13483 Beta-lactamase superfamily domain 2 187 1.9E-20 T 11-10-2018 ATC04_11905 0875be87e357e7842f61b6dd365f8f23 246 SUPERFAMILY SSF56281 1 201 8.39E-19 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_11905 0875be87e357e7842f61b6dd365f8f23 246 SMART SM00849 7 187 0.0051 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_11905 0875be87e357e7842f61b6dd365f8f23 246 Gene3D G3DSA:3.60.15.10 1 194 2.8E-25 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_03295 70848bf820dc0e6551bb51682491ee88 573 Gene3D G3DSA:3.40.50.1220 178 331 6.5E-40 T 11-10-2018 ATC04_03295 70848bf820dc0e6551bb51682491ee88 573 Gene3D G3DSA:3.40.50.970 363 572 8.8E-56 T 11-10-2018 ATC04_03295 70848bf820dc0e6551bb51682491ee88 573 SUPERFAMILY SSF52518 2 170 3.44E-44 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_03295 70848bf820dc0e6551bb51682491ee88 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 168 2.1E-46 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ATC04_03295 70848bf820dc0e6551bb51682491ee88 573 Gene3D G3DSA:3.40.50.970 1 176 1.3E-56 T 11-10-2018 ATC04_03295 70848bf820dc0e6551bb51682491ee88 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 190 318 3.9E-29 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ATC04_03295 70848bf820dc0e6551bb51682491ee88 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 540 9.3E-36 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ATC04_03295 70848bf820dc0e6551bb51682491ee88 573 SUPERFAMILY SSF52518 372 561 5.9E-53 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_03295 70848bf820dc0e6551bb51682491ee88 573 SUPERFAMILY SSF52467 184 351 2.5E-39 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ATC04_14450 22a50d0eb5c766d16df71d9e39dcdaf2 362 SUPERFAMILY SSF53822 57 292 1.57E-7 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ATC04_14450 22a50d0eb5c766d16df71d9e39dcdaf2 362 Gene3D G3DSA:3.40.50.2300 44 317 4.8E-87 T 11-10-2018 ATC04_14450 22a50d0eb5c766d16df71d9e39dcdaf2 362 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 46 356 5.8E-48 T 11-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 ATC04_14450 22a50d0eb5c766d16df71d9e39dcdaf2 362 Gene3D G3DSA:3.40.50.2300 145 353 4.8E-87 T 11-10-2018 ATC04_13255 d2d1022b71694b0a838a6ec5a6c07a24 310 Gene3D G3DSA:1.10.3720.10 91 309 8.0E-25 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_13255 d2d1022b71694b0a838a6ec5a6c07a24 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 67 3.7E-8 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ATC04_13255 d2d1022b71694b0a838a6ec5a6c07a24 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 308 3.2E-29 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_13255 d2d1022b71694b0a838a6ec5a6c07a24 310 SUPERFAMILY SSF161098 97 291 7.72E-26 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 Gene3D G3DSA:3.30.10.20 612 679 4.5E-14 T 11-10-2018 ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 Gene3D G3DSA:3.30.10.20 477 543 1.3E-7 T 11-10-2018 ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 137 149 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 SMART SM00220 18 273 3.0E-67 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 Gene3D G3DSA:3.30.10.20 544 610 1.6E-18 T 11-10-2018 ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 Pfam PF03793 PASTA domain 614 675 1.4E-10 T 11-10-2018 IPR005543 PASTA domain ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 Pfam PF03793 PASTA domain 547 609 1.1E-14 T 11-10-2018 IPR005543 PASTA domain ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 Pfam PF00069 Protein kinase domain 22 269 1.7E-54 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 Gene3D G3DSA:3.30.10.20 681 738 1.8E-5 T 11-10-2018 ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 Gene3D G3DSA:3.30.200.20 7 97 4.6E-25 T 11-10-2018 ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 SMART SM00740 475 541 0.71 T 11-10-2018 IPR005543 PASTA domain ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 SMART SM00740 610 676 2.7E-9 T 11-10-2018 IPR005543 PASTA domain ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 SMART SM00740 677 738 1.3 T 11-10-2018 IPR005543 PASTA domain ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 SMART SM00740 542 609 1.0E-13 T 11-10-2018 IPR005543 PASTA domain ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 SUPERFAMILY SSF56112 15 274 5.13E-74 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ATC04_12175 762d750f99a74efa71f4fbfdaf191e26 739 Gene3D G3DSA:1.10.510.10 99 286 2.6E-50 T 11-10-2018 ATC04_01660 ca08926f353b4d58c6cd66b72f38608d 462 Pfam PF00175 Oxidoreductase NAD-binding domain 161 266 6.2E-12 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ATC04_01660 ca08926f353b4d58c6cd66b72f38608d 462 Gene3D G3DSA:3.10.20.30 367 462 8.3E-19 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ATC04_01660 ca08926f353b4d58c6cd66b72f38608d 462 SUPERFAMILY SSF54292 374 461 1.05E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ATC04_01660 ca08926f353b4d58c6cd66b72f38608d 462 Gene3D G3DSA:3.40.50.80 153 292 4.0E-24 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_01660 ca08926f353b4d58c6cd66b72f38608d 462 SUPERFAMILY SSF52343 139 283 1.83E-29 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_01660 ca08926f353b4d58c6cd66b72f38608d 462 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 388 453 2.5E-8 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ATC04_01660 ca08926f353b4d58c6cd66b72f38608d 462 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 412 420 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ATC04_01660 ca08926f353b4d58c6cd66b72f38608d 462 PRINTS PR00410 Phenol hydroxylase reductase family signature 253 261 4.8E-9 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ATC04_01660 ca08926f353b4d58c6cd66b72f38608d 462 PRINTS PR00410 Phenol hydroxylase reductase family signature 160 179 4.8E-9 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ATC04_01660 ca08926f353b4d58c6cd66b72f38608d 462 PRINTS PR00410 Phenol hydroxylase reductase family signature 77 89 4.8E-9 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ATC04_01660 ca08926f353b4d58c6cd66b72f38608d 462 Gene3D G3DSA:2.40.30.10 45 149 1.3E-21 T 11-10-2018 ATC04_01660 ca08926f353b4d58c6cd66b72f38608d 462 Pfam PF00970 Oxidoreductase FAD-binding domain 63 149 8.6E-8 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ATC04_01660 ca08926f353b4d58c6cd66b72f38608d 462 SUPERFAMILY SSF63380 44 148 8.0E-23 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ATC04_06825 f4ce5a9e15478b2a083e32f9018bbc60 276 Gene3D G3DSA:3.40.190.10 38 254 1.4E-63 T 11-10-2018 ATC04_06825 f4ce5a9e15478b2a083e32f9018bbc60 276 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site ATC04_06825 f4ce5a9e15478b2a083e32f9018bbc60 276 Gene3D G3DSA:3.40.190.10 122 222 1.4E-63 T 11-10-2018 ATC04_06825 f4ce5a9e15478b2a083e32f9018bbc60 276 SMART SM00062 36 258 2.8E-62 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ATC04_06825 f4ce5a9e15478b2a083e32f9018bbc60 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 3.6E-46 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ATC04_06825 f4ce5a9e15478b2a083e32f9018bbc60 276 SUPERFAMILY SSF53850 8 254 1.45E-53 T 11-10-2018 ATC04_09910 435d0dac6545fd7474e7d23f4d1d2b63 980 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 114 205 3.8E-15 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 ATC04_09910 435d0dac6545fd7474e7d23f4d1d2b63 980 Gene3D G3DSA:3.40.50.300 273 476 4.2E-24 T 11-10-2018 ATC04_09910 435d0dac6545fd7474e7d23f4d1d2b63 980 Gene3D G3DSA:3.90.1570.50 107 188 4.6E-7 T 11-10-2018 ATC04_09910 435d0dac6545fd7474e7d23f4d1d2b63 980 SMART SM00487 269 489 5.5E-12 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_09910 435d0dac6545fd7474e7d23f4d1d2b63 980 Pfam PF04851 Type III restriction enzyme, res subunit 273 463 1.0E-15 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ATC04_09910 435d0dac6545fd7474e7d23f4d1d2b63 980 SUPERFAMILY SSF52540 234 469 7.98E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09910 435d0dac6545fd7474e7d23f4d1d2b63 980 Gene3D G3DSA:3.40.50.300 489 712 1.8E-19 T 11-10-2018 ATC04_11480 7938d3887f71d037826c64a77269e47f 219 Gene3D G3DSA:1.10.10.10 1 68 4.2E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_11480 7938d3887f71d037826c64a77269e47f 219 SUPERFAMILY SSF46785 4 71 2.9E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_11480 7938d3887f71d037826c64a77269e47f 219 SUPERFAMILY SSF48008 79 208 1.41E-19 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_11480 7938d3887f71d037826c64a77269e47f 219 SMART SM00345 9 67 8.7E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_11480 7938d3887f71d037826c64a77269e47f 219 SMART SM00895 77 203 6.2E-11 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_11480 7938d3887f71d037826c64a77269e47f 219 Pfam PF07729 FCD domain 79 201 6.2E-24 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_11480 7938d3887f71d037826c64a77269e47f 219 Gene3D G3DSA:1.20.120.530 75 209 2.2E-23 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_11480 7938d3887f71d037826c64a77269e47f 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 67 1.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_12785 861528de416c182f5b585d78293abaf5 361 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 135 3.7E-24 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATC04_12785 861528de416c182f5b585d78293abaf5 361 SUPERFAMILY SSF50129 5 175 2.43E-38 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_12785 861528de416c182f5b585d78293abaf5 361 Pfam PF00107 Zinc-binding dehydrogenase 176 286 7.4E-16 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATC04_12785 861528de416c182f5b585d78293abaf5 361 Gene3D G3DSA:3.90.180.10 11 325 1.0E-85 T 11-10-2018 ATC04_12785 861528de416c182f5b585d78293abaf5 361 SUPERFAMILY SSF51735 139 301 6.68E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_12785 861528de416c182f5b585d78293abaf5 361 Gene3D G3DSA:3.40.50.720 153 285 1.0E-85 T 11-10-2018 ATC04_03250 98745ddeb337fa93b89583297f03ba64 324 SUPERFAMILY SSF52518 3 184 5.4E-60 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_03250 98745ddeb337fa93b89583297f03ba64 324 Gene3D G3DSA:3.40.50.920 199 320 2.1E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ATC04_03250 98745ddeb337fa93b89583297f03ba64 324 Pfam PF02779 Transketolase, pyrimidine binding domain 3 177 3.8E-38 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ATC04_03250 98745ddeb337fa93b89583297f03ba64 324 Gene3D G3DSA:3.40.50.970 1 198 3.1E-69 T 11-10-2018 ATC04_03250 98745ddeb337fa93b89583297f03ba64 324 SMART SM00861 4 179 3.9E-56 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ATC04_03250 98745ddeb337fa93b89583297f03ba64 324 Pfam PF02780 Transketolase, C-terminal domain 194 313 5.0E-39 T 11-10-2018 IPR033248 Transketolase, C-terminal domain ATC04_03250 98745ddeb337fa93b89583297f03ba64 324 SUPERFAMILY SSF52922 194 320 1.31E-37 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ATC04_07325 9ec5a3de8649d0efcff0167ab16abb4f 485 Gene3D G3DSA:3.40.1390.10 2 84 8.1E-17 T 11-10-2018 ATC04_07325 9ec5a3de8649d0efcff0167ab16abb4f 485 SUPERFAMILY SSF53244 331 470 8.06E-31 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATC04_07325 9ec5a3de8649d0efcff0167ab16abb4f 485 Gene3D G3DSA:3.40.1190.10 89 324 7.3E-63 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATC04_07325 9ec5a3de8649d0efcff0167ab16abb4f 485 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 470 8.8E-112 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_07325 9ec5a3de8649d0efcff0167ab16abb4f 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 417 7.4E-19 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ATC04_07325 9ec5a3de8649d0efcff0167ab16abb4f 485 Gene3D G3DSA:3.90.190.20 329 482 3.6E-34 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATC04_07325 9ec5a3de8649d0efcff0167ab16abb4f 485 Pfam PF08245 Mur ligase middle domain 116 308 9.1E-41 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ATC04_07325 9ec5a3de8649d0efcff0167ab16abb4f 485 SUPERFAMILY SSF53623 111 324 1.68E-47 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATC04_07325 9ec5a3de8649d0efcff0167ab16abb4f 485 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 476 29.144 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_07325 9ec5a3de8649d0efcff0167ab16abb4f 485 Pfam PF01225 Mur ligase family, catalytic domain 27 99 2.7E-7 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ATC04_07325 9ec5a3de8649d0efcff0167ab16abb4f 485 SUPERFAMILY SSF63418 1 102 4.71E-21 T 11-10-2018 IPR035911 MurE/MurF, N-terminal ATC04_14690 7550d8423f5a18181ab965de6f27e783 192 SUPERFAMILY SSF58113 117 190 1.7E-7 T 11-10-2018 ATC04_14690 7550d8423f5a18181ab965de6f27e783 192 Pfam PF12277 Protein of unknown function (DUF3618) 3 47 2.9E-13 T 11-10-2018 IPR022062 Protein of unknown function DUF3618 ATC04_14690 7550d8423f5a18181ab965de6f27e783 192 SUPERFAMILY SSF47162 4 153 9.94E-6 T 11-10-2018 ATC04_14690 7550d8423f5a18181ab965de6f27e783 192 Gene3D G3DSA:1.20.120.20 1 90 4.6E-6 T 11-10-2018 ATC04_14690 7550d8423f5a18181ab965de6f27e783 192 Gene3D G3DSA:1.20.5.1230 113 192 2.3E-7 T 11-10-2018 ATC04_17000 363f660a85624de454cc37292cb2ee2c 340 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 8 337 4.8E-71 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ATC04_17000 363f660a85624de454cc37292cb2ee2c 340 PIRSF PIRSF001359 5 338 6.8E-64 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ATC04_17000 363f660a85624de454cc37292cb2ee2c 340 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 336 7.1E-127 T 11-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 ATC04_17000 363f660a85624de454cc37292cb2ee2c 340 SUPERFAMILY SSF51569 3 337 2.49E-95 T 11-10-2018 ATC04_17000 363f660a85624de454cc37292cb2ee2c 340 Pfam PF01116 Fructose-bisphosphate aldolase class-II 8 337 3.4E-80 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ATC04_17000 363f660a85624de454cc37292cb2ee2c 340 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 86 97 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ATC04_17000 363f660a85624de454cc37292cb2ee2c 340 Gene3D G3DSA:3.20.20.70 1 340 1.7E-120 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_17000 363f660a85624de454cc37292cb2ee2c 340 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 158 169 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ATC04_14445 4a862cbb878bf824a0bb99627e815392 537 Pfam PF00005 ABC transporter 271 427 6.4E-17 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_14445 4a862cbb878bf824a0bb99627e815392 537 SUPERFAMILY SSF52540 267 479 8.04E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_14445 4a862cbb878bf824a0bb99627e815392 537 Gene3D G3DSA:3.40.50.300 1 235 1.4E-54 T 11-10-2018 ATC04_14445 4a862cbb878bf824a0bb99627e815392 537 Pfam PF00005 ABC transporter 19 168 8.1E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_14445 4a862cbb878bf824a0bb99627e815392 537 SUPERFAMILY SSF52540 3 222 4.22E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_14445 4a862cbb878bf824a0bb99627e815392 537 SMART SM00382 27 216 5.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_14445 4a862cbb878bf824a0bb99627e815392 537 SMART SM00382 280 476 8.1 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_14445 4a862cbb878bf824a0bb99627e815392 537 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_14445 4a862cbb878bf824a0bb99627e815392 537 Gene3D G3DSA:3.40.50.300 254 489 3.2E-37 T 11-10-2018 ATC04_05355 c3278361e3d0271fcef4189bca3b1581 285 Gene3D G3DSA:1.10.10.10 221 284 2.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_05355 c3278361e3d0271fcef4189bca3b1581 285 Pfam PF00196 Bacterial regulatory proteins, luxR family 223 277 1.5E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_05355 c3278361e3d0271fcef4189bca3b1581 285 Gene3D G3DSA:3.30.450.40 12 143 3.5E-13 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_05355 c3278361e3d0271fcef4189bca3b1581 285 SUPERFAMILY SSF55781 11 147 5.89E-9 T 11-10-2018 ATC04_05355 c3278361e3d0271fcef4189bca3b1581 285 SMART SM00421 221 278 1.1E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_05355 c3278361e3d0271fcef4189bca3b1581 285 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 224 238 2.7E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_05355 c3278361e3d0271fcef4189bca3b1581 285 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 254 266 2.7E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_05355 c3278361e3d0271fcef4189bca3b1581 285 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 238 254 2.7E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_05355 c3278361e3d0271fcef4189bca3b1581 285 SUPERFAMILY SSF46894 219 284 9.52E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_05355 c3278361e3d0271fcef4189bca3b1581 285 ProSitePatterns PS00622 LuxR-type HTH domain signature. 238 265 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_04250 28da3b85591c62ef054cacf4b0f65166 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.1E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_04250 28da3b85591c62ef054cacf4b0f65166 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.1E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_04250 28da3b85591c62ef054cacf4b0f65166 184 SUPERFAMILY SSF46689 3 75 1.03E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_04250 28da3b85591c62ef054cacf4b0f65166 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 6.6E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_04250 28da3b85591c62ef054cacf4b0f65166 184 Gene3D G3DSA:1.10.357.10 5 179 2.0E-25 T 11-10-2018 ATC04_17905 71e1ccd39290bb3e855ec730a2fbc3a1 564 Gene3D G3DSA:3.40.50.300 230 555 2.0E-17 T 11-10-2018 ATC04_17905 71e1ccd39290bb3e855ec730a2fbc3a1 564 Gene3D G3DSA:1.10.486.10 334 491 2.0E-17 T 11-10-2018 ATC04_17905 71e1ccd39290bb3e855ec730a2fbc3a1 564 Pfam PF13245 AAA domain 12 201 4.8E-19 T 11-10-2018 ATC04_17905 71e1ccd39290bb3e855ec730a2fbc3a1 564 Pfam PF13361 UvrD-like helicase C-terminal domain 392 549 1.8E-10 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ATC04_17905 71e1ccd39290bb3e855ec730a2fbc3a1 564 SUPERFAMILY SSF52540 10 556 1.23E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08130 c6cc9be746caf3cddac45af930a9892f 159 Pfam PF00583 Acetyltransferase (GNAT) family 34 137 1.8E-18 T 11-10-2018 IPR000182 GNAT domain ATC04_08130 c6cc9be746caf3cddac45af930a9892f 159 Gene3D G3DSA:3.40.630.30 8 136 1.7E-29 T 11-10-2018 ATC04_08130 c6cc9be746caf3cddac45af930a9892f 159 SUPERFAMILY SSF55729 15 140 3.55E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 SUPERFAMILY SSF82714 703 784 5.89E-6 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 Gene3D G3DSA:3.30.70.1430 554 653 8.9E-262 T 11-10-2018 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 SUPERFAMILY SSF82866 788 1015 1.7E-47 T 11-10-2018 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 Gene3D G3DSA:3.30.2090.10 701 787 8.9E-262 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 Pfam PF00873 AcrB/AcrD/AcrF family 7 1010 1.5E-207 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 Gene3D G3DSA:3.30.2090.10 177 266 8.9E-262 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 SUPERFAMILY SSF82714 183 261 1.27E-7 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 Gene3D G3DSA:3.30.70.1440 654 844 8.9E-262 T 11-10-2018 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 SUPERFAMILY SSF82693 135 320 1.57E-11 T 11-10-2018 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 Gene3D G3DSA:1.20.1640.10 501 1007 8.9E-262 T 11-10-2018 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 SUPERFAMILY SSF82693 42 127 1.12E-20 T 11-10-2018 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 Gene3D G3DSA:3.30.70.1430 41 795 8.9E-262 T 11-10-2018 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 Gene3D G3DSA:1.20.1640.10 11 500 8.9E-262 T 11-10-2018 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 5.5E-41 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 5.5E-41 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 5.5E-41 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 5.5E-41 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 5.5E-41 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 5.5E-41 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 Gene3D G3DSA:3.30.70.1320 134 323 8.9E-262 T 11-10-2018 ATC04_11200 f9f5291fe1bebf0a54d7f853db56f7f7 1152 SUPERFAMILY SSF82866 290 487 7.19E-45 T 11-10-2018 ATC04_13740 e54dddb838038b443fc35f5175dc8df4 302 SUPERFAMILY SSF56112 39 277 1.37E-32 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ATC04_13740 e54dddb838038b443fc35f5175dc8df4 302 Gene3D G3DSA:3.90.1200.10 116 282 1.6E-15 T 11-10-2018 ATC04_13740 e54dddb838038b443fc35f5175dc8df4 302 Pfam PF01636 Phosphotransferase enzyme family 41 261 2.2E-29 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ATC04_13740 e54dddb838038b443fc35f5175dc8df4 302 Gene3D G3DSA:3.30.200.20 20 108 4.0E-9 T 11-10-2018 ATC04_02975 215323f1c9d8b71461a95ba493b27752 340 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 6 338 2.6E-107 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 ATC04_02975 215323f1c9d8b71461a95ba493b27752 340 Gene3D G3DSA:3.75.10.10 1 340 7.3E-114 T 11-10-2018 ATC04_02975 215323f1c9d8b71461a95ba493b27752 340 SUPERFAMILY SSF55909 3 339 4.28E-113 T 11-10-2018 ATC04_17080 dfc8a226d64c94bb40494d63b1944410 298 PIRSF PIRSF000103 2 297 8.2E-74 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 ATC04_17080 dfc8a226d64c94bb40494d63b1944410 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 292 1.4E-37 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ATC04_17080 dfc8a226d64c94bb40494d63b1944410 298 SUPERFAMILY SSF48179 164 294 8.5E-38 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_17080 dfc8a226d64c94bb40494d63b1944410 298 SUPERFAMILY SSF51735 7 163 2.49E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_17080 dfc8a226d64c94bb40494d63b1944410 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 9 294 7.8E-115 T 11-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 ATC04_17080 dfc8a226d64c94bb40494d63b1944410 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 163 2.7E-43 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ATC04_17080 dfc8a226d64c94bb40494d63b1944410 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 ATC04_17080 dfc8a226d64c94bb40494d63b1944410 298 Gene3D G3DSA:1.10.1040.10 166 296 1.8E-41 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATC04_17080 dfc8a226d64c94bb40494d63b1944410 298 Gene3D G3DSA:3.40.50.720 4 164 1.1E-48 T 11-10-2018 ATC04_01490 6320cff12de8871a3bad2b980589a7fc 281 SMART SM00882 4 227 6.7E-22 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_01490 6320cff12de8871a3bad2b980589a7fc 281 Gene3D G3DSA:3.30.30.40 115 152 5.6E-61 T 11-10-2018 ATC04_01490 6320cff12de8871a3bad2b980589a7fc 281 Pfam PF01144 Coenzyme A transferase 8 227 6.7E-31 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_01490 6320cff12de8871a3bad2b980589a7fc 281 Gene3D G3DSA:3.40.1080.10 13 268 5.6E-61 T 11-10-2018 ATC04_01490 6320cff12de8871a3bad2b980589a7fc 281 SUPERFAMILY SSF100950 4 267 7.26E-62 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 SUPERFAMILY SSF52540 35 367 3.57E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 34 848 1.8E-187 T 11-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 Gene3D G3DSA:3.40.50.300 199 375 2.3E-33 T 11-10-2018 ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 Pfam PF08482 ATP-dependent helicase C-terminal 701 836 4.7E-49 T 11-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 Gene3D G3DSA:1.20.120.1080 403 495 4.8E-13 T 11-10-2018 ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 Pfam PF00270 DEAD/DEAH box helicase 36 181 2.3E-9 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 SMART SM00490 258 358 2.9E-13 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 Gene3D G3DSA:3.40.50.300 4 196 1.4E-54 T 11-10-2018 ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 PIRSF PIRSF005496 22 850 3.8E-233 T 11-10-2018 ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 Pfam PF00271 Helicase conserved C-terminal domain 245 358 7.2E-12 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 SMART SM00847 418 504 2.3E-8 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 134 143 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 Pfam PF04408 Helicase associated domain (HA2) 421 482 1.7E-12 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 ATC04_04340 78fad9c5fa35645072cb54eaaf860c80 857 SMART SM00487 13 208 6.5E-19 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_16055 520152dbd0471f20167702017a496ba7 249 SUPERFAMILY SSF46785 11 77 1.89E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_16055 520152dbd0471f20167702017a496ba7 249 Pfam PF09339 IclR helix-turn-helix domain 11 59 2.2E-12 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_16055 520152dbd0471f20167702017a496ba7 249 Gene3D G3DSA:3.30.450.40 81 247 5.6E-33 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_16055 520152dbd0471f20167702017a496ba7 249 SUPERFAMILY SSF55781 81 245 6.08E-33 T 11-10-2018 ATC04_16055 520152dbd0471f20167702017a496ba7 249 Pfam PF01614 Bacterial transcriptional regulator 130 241 2.2E-13 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ATC04_16055 520152dbd0471f20167702017a496ba7 249 Gene3D G3DSA:1.10.10.10 9 80 1.1E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16055 520152dbd0471f20167702017a496ba7 249 SMART SM00346 11 97 1.4E-14 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_05910 da9e52e69531f3001f0c8e0c27befe1c 383 Gene3D G3DSA:1.20.1250.20 187 372 1.3E-19 T 11-10-2018 ATC04_05910 da9e52e69531f3001f0c8e0c27befe1c 383 Gene3D G3DSA:1.20.1250.20 1 184 1.0E-11 T 11-10-2018 ATC04_05910 da9e52e69531f3001f0c8e0c27befe1c 383 Pfam PF07690 Major Facilitator Superfamily 3 339 4.6E-24 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_05910 da9e52e69531f3001f0c8e0c27befe1c 383 SUPERFAMILY SSF103473 3 369 3.53E-36 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_16440 34c747b8cc6e4ab28648194cf6629df7 1236 SUPERFAMILY SSF52540 5 197 2.0E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16440 34c747b8cc6e4ab28648194cf6629df7 1236 SMART SM00382 9 150 2.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_16440 34c747b8cc6e4ab28648194cf6629df7 1236 SUPERFAMILY SSF48019 223 337 1.62E-16 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ATC04_16440 34c747b8cc6e4ab28648194cf6629df7 1236 Gene3D G3DSA:1.10.8.60 152 205 1.4E-83 T 11-10-2018 ATC04_16440 34c747b8cc6e4ab28648194cf6629df7 1236 Gene3D G3DSA:3.40.50.300 2 151 1.4E-83 T 11-10-2018 ATC04_16440 34c747b8cc6e4ab28648194cf6629df7 1236 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 210 336 1.4E-7 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 ATC04_16440 34c747b8cc6e4ab28648194cf6629df7 1236 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 334 4.2E-101 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 ATC04_16440 34c747b8cc6e4ab28648194cf6629df7 1236 Pfam PF13177 DNA polymerase III, delta subunit 3 150 2.0E-34 T 11-10-2018 ATC04_00240 3dcb7810e67c42ac886d9023a51a9c62 641 Gene3D G3DSA:1.10.8.60 337 411 7.1E-27 T 11-10-2018 ATC04_00240 3dcb7810e67c42ac886d9023a51a9c62 641 SMART SM00382 199 338 1.1E-24 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_00240 3dcb7810e67c42ac886d9023a51a9c62 641 SUPERFAMILY SSF52540 157 407 2.96E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_00240 3dcb7810e67c42ac886d9023a51a9c62 641 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 621 36.209 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 ATC04_00240 3dcb7810e67c42ac886d9023a51a9c62 641 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 6.2E-45 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ATC04_00240 3dcb7810e67c42ac886d9023a51a9c62 641 SUPERFAMILY SSF140990 417 606 9.42E-67 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 ATC04_00240 3dcb7810e67c42ac886d9023a51a9c62 641 Pfam PF01434 Peptidase family M41 398 602 4.1E-76 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 ATC04_00240 3dcb7810e67c42ac886d9023a51a9c62 641 Gene3D G3DSA:1.20.58.760 412 612 9.5E-68 T 11-10-2018 ATC04_00240 3dcb7810e67c42ac886d9023a51a9c62 641 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 116 603 1.8E-225 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 ATC04_00240 3dcb7810e67c42ac886d9023a51a9c62 641 ProSitePatterns PS00674 AAA-protein family signature. 306 324 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 ATC04_00240 3dcb7810e67c42ac886d9023a51a9c62 641 Gene3D G3DSA:3.40.50.300 153 336 1.5E-68 T 11-10-2018 ATC04_09045 56d6a285869c0e2ed39c7cbb70ec88a8 230 Gene3D G3DSA:3.40.50.1000 9 195 1.7E-43 T 11-10-2018 IPR023214 HAD superfamily ATC04_09045 56d6a285869c0e2ed39c7cbb70ec88a8 230 SUPERFAMILY SSF56784 7 196 5.93E-41 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_09045 56d6a285869c0e2ed39c7cbb70ec88a8 230 Gene3D G3DSA:1.10.150.240 19 87 1.7E-43 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ATC04_09045 56d6a285869c0e2ed39c7cbb70ec88a8 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 193 9.0E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ATC04_09045 56d6a285869c0e2ed39c7cbb70ec88a8 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 4.6E-24 T 11-10-2018 ATC04_04720 6cbbae8fe394d72215417003743639b0 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 17.614 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_04720 6cbbae8fe394d72215417003743639b0 78 SUPERFAMILY SSF143800 2 77 4.51E-24 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_04720 6cbbae8fe394d72215417003743639b0 78 Pfam PF00830 Ribosomal L28 family 4 60 2.7E-21 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_04720 6cbbae8fe394d72215417003743639b0 78 Gene3D G3DSA:2.30.170.40 3 78 3.9E-25 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_04720 6cbbae8fe394d72215417003743639b0 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.9E-20 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_09745 e94bae01753b116bafbc53cc2b8ff328 476 Gene3D G3DSA:3.30.565.10 322 473 9.5E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_09745 e94bae01753b116bafbc53cc2b8ff328 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 4.0E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_09745 e94bae01753b116bafbc53cc2b8ff328 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 4.0E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_09745 e94bae01753b116bafbc53cc2b8ff328 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 464 1.8E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_09745 e94bae01753b116bafbc53cc2b8ff328 476 Gene3D G3DSA:1.10.287.130 186 301 3.4E-19 T 11-10-2018 ATC04_09745 e94bae01753b116bafbc53cc2b8ff328 476 SMART SM00387 359 468 2.8E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_09745 e94bae01753b116bafbc53cc2b8ff328 476 SMART SM00388 235 300 1.6E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_09745 e94bae01753b116bafbc53cc2b8ff328 476 SUPERFAMILY SSF55874 329 467 3.67E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_09745 e94bae01753b116bafbc53cc2b8ff328 476 Pfam PF00672 HAMP domain 183 227 3.1E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ATC04_09745 e94bae01753b116bafbc53cc2b8ff328 476 SMART SM00304 182 234 5.8E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ATC04_09745 e94bae01753b116bafbc53cc2b8ff328 476 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 299 1.1E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_09745 e94bae01753b116bafbc53cc2b8ff328 476 SUPERFAMILY SSF47384 218 298 6.08E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ATC04_12650 9fb85e25c85b126b3f5dd2895238678b 509 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 19 454 4.6E-135 T 11-10-2018 ATC04_12650 9fb85e25c85b126b3f5dd2895238678b 509 SMART SM00729 163 381 7.7E-56 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ATC04_12650 9fb85e25c85b126b3f5dd2895238678b 509 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 18 457 7.7E-146 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 ATC04_12650 9fb85e25c85b126b3f5dd2895238678b 509 Gene3D G3DSA:3.80.30.20 162 395 4.3E-88 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ATC04_12650 9fb85e25c85b126b3f5dd2895238678b 509 SUPERFAMILY SSF102114 150 385 2.35E-54 T 11-10-2018 ATC04_12650 9fb85e25c85b126b3f5dd2895238678b 509 Pfam PF04055 Radical SAM superfamily 167 338 3.4E-29 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ATC04_12650 9fb85e25c85b126b3f5dd2895238678b 509 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 167 187 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 ATC04_12650 9fb85e25c85b126b3f5dd2895238678b 509 Gene3D G3DSA:3.40.50.12160 18 150 6.3E-31 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily ATC04_12650 9fb85e25c85b126b3f5dd2895238678b 509 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 17 462 64.336 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 ATC04_12650 9fb85e25c85b126b3f5dd2895238678b 509 Pfam PF00919 Uncharacterized protein family UPF0004 19 120 1.8E-25 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 ATC04_11335 cd0d8eba1e37913c480f2f347a19d7a5 131 Pfam PF00460 Flagella basal body rod protein 8 33 2.5E-4 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ATC04_11335 cd0d8eba1e37913c480f2f347a19d7a5 131 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 82 127 5.0E-6 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ATC04_11335 cd0d8eba1e37913c480f2f347a19d7a5 131 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 12 32 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site ATC04_08235 1b4db1ff8eb7060438de3c8a6429cbc4 246 SUPERFAMILY SSF100950 5 246 3.77E-56 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_08235 1b4db1ff8eb7060438de3c8a6429cbc4 246 Gene3D G3DSA:3.40.50.1360 4 246 6.5E-74 T 11-10-2018 ATC04_08235 1b4db1ff8eb7060438de3c8a6429cbc4 246 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 244 3.0E-62 T 11-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 ATC04_08235 1b4db1ff8eb7060438de3c8a6429cbc4 246 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 12 236 3.0E-66 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 ATC04_05350 1c66079cace5ba7d452c7d1501d1c27f 290 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 195 290 8.1E-29 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ATC04_05350 1c66079cace5ba7d452c7d1501d1c27f 290 SUPERFAMILY SSF51735 16 194 7.59E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_05350 1c66079cace5ba7d452c7d1501d1c27f 290 PIRSF PIRSF000105 11 290 9.5E-73 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 ATC04_05350 1c66079cace5ba7d452c7d1501d1c27f 290 Gene3D G3DSA:3.40.50.720 14 197 1.2E-52 T 11-10-2018 ATC04_05350 1c66079cace5ba7d452c7d1501d1c27f 290 Gene3D G3DSA:1.10.1040.10 198 290 1.2E-32 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATC04_05350 1c66079cace5ba7d452c7d1501d1c27f 290 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 16 192 1.3E-50 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ATC04_05350 1c66079cace5ba7d452c7d1501d1c27f 290 SUPERFAMILY SSF48179 194 290 1.19E-29 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_03085 d8cf87ba7d5bc522303a0e2282fc8ad1 305 Pfam PF00005 ABC transporter 30 166 1.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_03085 d8cf87ba7d5bc522303a0e2282fc8ad1 305 SMART SM00382 38 221 6.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_03085 d8cf87ba7d5bc522303a0e2282fc8ad1 305 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_03085 d8cf87ba7d5bc522303a0e2282fc8ad1 305 SUPERFAMILY SSF52540 11 226 4.32E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03085 d8cf87ba7d5bc522303a0e2282fc8ad1 305 Gene3D G3DSA:3.40.50.300 8 279 3.4E-61 T 11-10-2018 ATC04_15755 7b0a9da26f9b7228ed4002e9e8f7c519 175 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 1.3E-14 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal ATC04_15755 7b0a9da26f9b7228ed4002e9e8f7c519 175 Gene3D G3DSA:1.10.10.10 1 87 6.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_15755 7b0a9da26f9b7228ed4002e9e8f7c519 175 Pfam PF10400 Virulence activator alpha C-term 93 174 2.2E-13 T 11-10-2018 IPR018309 Transcription regulator PadR, C-terminal ATC04_15755 7b0a9da26f9b7228ed4002e9e8f7c519 175 SUPERFAMILY SSF46785 5 174 6.83E-38 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_12750 0f4b3cd496dc24c9af8d6b87a083efb3 252 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 112 245 8.5E-30 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_12750 0f4b3cd496dc24c9af8d6b87a083efb3 252 SUPERFAMILY SSF51735 4 136 4.2E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_12750 0f4b3cd496dc24c9af8d6b87a083efb3 252 Gene3D G3DSA:3.40.50.720 7 239 1.4E-78 T 11-10-2018 ATC04_12750 0f4b3cd496dc24c9af8d6b87a083efb3 252 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 249 28.814 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_12750 0f4b3cd496dc24c9af8d6b87a083efb3 252 Gene3D G3DSA:3.30.360.10 110 218 1.4E-78 T 11-10-2018 ATC04_12750 0f4b3cd496dc24c9af8d6b87a083efb3 252 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 109 9.4E-24 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_12750 0f4b3cd496dc24c9af8d6b87a083efb3 252 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 52 248 9.9E-53 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_12750 0f4b3cd496dc24c9af8d6b87a083efb3 252 PIRSF PIRSF000161 3 251 3.8E-64 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_12750 0f4b3cd496dc24c9af8d6b87a083efb3 252 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 131 148 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_12750 0f4b3cd496dc24c9af8d6b87a083efb3 252 SUPERFAMILY SSF55347 110 220 1.59E-40 T 11-10-2018 ATC04_07285 c3ffd525a042202c683b481bac4eeb2a 352 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 230 242 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site ATC04_07285 c3ffd525a042202c683b481bac4eeb2a 352 SUPERFAMILY SSF48576 9 351 1.4E-66 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ATC04_07285 c3ffd525a042202c683b481bac4eeb2a 352 Pfam PF00348 Polyprenyl synthetase 35 298 4.6E-54 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 ATC04_07285 c3ffd525a042202c683b481bac4eeb2a 352 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 84 98 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site ATC04_07285 c3ffd525a042202c683b481bac4eeb2a 352 Gene3D G3DSA:1.10.600.10 2 352 3.7E-100 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ATC04_02775 d557d7e14108306077f19a5cab496504 497 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ATC04_02775 d557d7e14108306077f19a5cab496504 497 PIRSF PIRSF006060 1 470 1.1E-67 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_02775 d557d7e14108306077f19a5cab496504 497 Pfam PF00324 Amino acid permease 18 455 9.8E-107 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ATC04_02775 d557d7e14108306077f19a5cab496504 497 Gene3D G3DSA:1.20.1740.10 10 467 1.6E-59 T 11-10-2018 ATC04_02535 e5f116b1ef7a72c582981c0abf5a5273 488 Gene3D G3DSA:3.40.309.10 262 455 1.1E-159 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_02535 e5f116b1ef7a72c582981c0abf5a5273 488 Gene3D G3DSA:3.40.605.10 26 483 1.1E-159 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_02535 e5f116b1ef7a72c582981c0abf5a5273 488 SUPERFAMILY SSF53720 13 484 7.2E-149 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_02535 e5f116b1ef7a72c582981c0abf5a5273 488 Pfam PF00171 Aldehyde dehydrogenase family 26 483 2.0E-152 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_02535 e5f116b1ef7a72c582981c0abf5a5273 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ATC04_08480 f695167528b023848155b9773bcda6af 872 SUPERFAMILY SSF47323 644 859 2.8E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_08480 f695167528b023848155b9773bcda6af 872 Gene3D G3DSA:3.40.50.620 36 593 2.1E-188 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_08480 f695167528b023848155b9773bcda6af 872 Gene3D G3DSA:1.10.730.10 25 808 2.1E-188 T 11-10-2018 ATC04_08480 f695167528b023848155b9773bcda6af 872 Hamap MF_02005 Valine--tRNA ligase [valS]. 16 852 27.049 T 11-10-2018 IPR022874 Valine-tRNA ligase, type 2 GO:0004832 KEGG: 00970+6.1.1.9 ATC04_08480 f695167528b023848155b9773bcda6af 872 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 31 629 1.6E-92 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_08480 f695167528b023848155b9773bcda6af 872 PRINTS PR00986 Valyl-tRNA synthetase signature 544 562 3.5E-20 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ATC04_08480 f695167528b023848155b9773bcda6af 872 PRINTS PR00986 Valyl-tRNA synthetase signature 264 281 3.5E-20 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ATC04_08480 f695167528b023848155b9773bcda6af 872 PRINTS PR00986 Valyl-tRNA synthetase signature 513 534 3.5E-20 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ATC04_08480 f695167528b023848155b9773bcda6af 872 PRINTS PR00986 Valyl-tRNA synthetase signature 51 62 3.5E-20 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ATC04_08480 f695167528b023848155b9773bcda6af 872 PRINTS PR00986 Valyl-tRNA synthetase signature 393 406 3.5E-20 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ATC04_08480 f695167528b023848155b9773bcda6af 872 SUPERFAMILY SSF52374 15 635 3.96E-105 T 11-10-2018 ATC04_08480 f695167528b023848155b9773bcda6af 872 SUPERFAMILY SSF50677 226 378 1.44E-31 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATC04_08480 f695167528b023848155b9773bcda6af 872 Pfam PF08264 Anticodon-binding domain of tRNA 675 818 1.6E-25 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ATC04_08480 f695167528b023848155b9773bcda6af 872 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_08480 f695167528b023848155b9773bcda6af 872 Gene3D G3DSA:3.90.740.10 210 389 2.1E-188 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATC04_09110 4dbb207e9a55349f6c8a6a26387af51d 252 Gene3D G3DSA:1.10.10.200 1 80 1.5E-28 T 11-10-2018 IPR017856 Integrase-like, N-terminal ATC04_09110 4dbb207e9a55349f6c8a6a26387af51d 252 Gene3D G3DSA:3.30.70.980 85 237 2.0E-50 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09110 4dbb207e9a55349f6c8a6a26387af51d 252 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 2.1E-88 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09110 4dbb207e9a55349f6c8a6a26387af51d 252 Pfam PF01709 Transcriptional regulator 5 238 5.0E-84 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09110 4dbb207e9a55349f6c8a6a26387af51d 252 Gene3D G3DSA:3.30.70.980 134 206 2.0E-50 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09110 4dbb207e9a55349f6c8a6a26387af51d 252 SUPERFAMILY SSF75625 3 246 3.4E-83 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09110 4dbb207e9a55349f6c8a6a26387af51d 252 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 32.597 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_04685 a33d056869469e328990aa8b8e083632 155 Gene3D G3DSA:3.30.70.920 63 141 4.2E-16 T 11-10-2018 ATC04_04685 a33d056869469e328990aa8b8e083632 155 Pfam PF01037 Lrp/AsnC ligand binding domain 83 143 2.1E-11 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATC04_04685 a33d056869469e328990aa8b8e083632 155 SUPERFAMILY SSF46785 11 69 8.39E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_04685 a33d056869469e328990aa8b8e083632 155 SUPERFAMILY SSF54909 79 151 4.56E-13 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_04685 a33d056869469e328990aa8b8e083632 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 1.2E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_04685 a33d056869469e328990aa8b8e083632 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 1.2E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_04685 a33d056869469e328990aa8b8e083632 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 1.2E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_04685 a33d056869469e328990aa8b8e083632 155 Pfam PF13404 AsnC-type helix-turn-helix domain 11 51 1.4E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_04685 a33d056869469e328990aa8b8e083632 155 Gene3D G3DSA:1.10.10.10 9 60 6.0E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_04685 a33d056869469e328990aa8b8e083632 155 SMART SM00344 11 115 2.3E-30 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATC04_15520 d0284d961699cc4d7c4b61151226e848 384 Gene3D G3DSA:3.40.50.300 3 166 1.3E-51 T 11-10-2018 ATC04_15520 d0284d961699cc4d7c4b61151226e848 384 SMART SM00382 28 168 7.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_15520 d0284d961699cc4d7c4b61151226e848 384 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 302 376 6.2E-5 T 11-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_15520 d0284d961699cc4d7c4b61151226e848 384 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 200 2.7E-54 T 11-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATC04_15520 d0284d961699cc4d7c4b61151226e848 384 SUPERFAMILY SSF52540 6 207 4.59E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15520 d0284d961699cc4d7c4b61151226e848 384 Pfam PF13177 DNA polymerase III, delta subunit 11 166 2.0E-43 T 11-10-2018 ATC04_09140 bc3720ddbb0d7c12ce28f2b0922d16e5 324 SUPERFAMILY SSF82866 123 308 2.75E-32 T 11-10-2018 ATC04_09140 bc3720ddbb0d7c12ce28f2b0922d16e5 324 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 18 309 23.082 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ATC04_09140 bc3720ddbb0d7c12ce28f2b0922d16e5 324 Pfam PF07549 SecD/SecF GG Motif 45 62 3.3E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ATC04_09140 bc3720ddbb0d7c12ce28f2b0922d16e5 324 Pfam PF02355 Protein export membrane protein 115 307 7.0E-50 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ATC04_09140 bc3720ddbb0d7c12ce28f2b0922d16e5 324 PRINTS PR01755 Bacterial translocase SecF protein signature 46 61 3.2E-18 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ATC04_09140 bc3720ddbb0d7c12ce28f2b0922d16e5 324 PRINTS PR01755 Bacterial translocase SecF protein signature 206 224 3.2E-18 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ATC04_09140 bc3720ddbb0d7c12ce28f2b0922d16e5 324 PRINTS PR01755 Bacterial translocase SecF protein signature 241 256 3.2E-18 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ATC04_09140 bc3720ddbb0d7c12ce28f2b0922d16e5 324 Gene3D G3DSA:1.20.1640.10 99 323 5.8E-11 T 11-10-2018 ATC04_09140 bc3720ddbb0d7c12ce28f2b0922d16e5 324 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 67 295 1.4E-44 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ATC04_09140 bc3720ddbb0d7c12ce28f2b0922d16e5 324 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 47 297 1.0E-55 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ATC04_04255 4805822346a4a8707f8206d51f26c415 418 SUPERFAMILY SSF103473 6 397 1.57E-45 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_04255 4805822346a4a8707f8206d51f26c415 418 Pfam PF07690 Major Facilitator Superfamily 17 361 1.3E-19 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_04255 4805822346a4a8707f8206d51f26c415 418 Gene3D G3DSA:1.20.1250.20 9 404 3.2E-33 T 11-10-2018 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 SUPERFAMILY SSF81653 141 238 3.27E-22 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 111 605 1.0E-80 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 89 630 4.1E-145 T 11-10-2018 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 Pfam PF00702 haloacid dehalogenase-like hydrolase 336 539 9.6E-37 T 11-10-2018 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 550 562 1.9E-27 T 11-10-2018 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 337 351 1.9E-27 T 11-10-2018 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 188 202 1.9E-27 T 11-10-2018 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 526 545 1.9E-27 T 11-10-2018 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 474 484 1.9E-27 T 11-10-2018 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 452 463 1.9E-27 T 11-10-2018 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 SUPERFAMILY SSF81665 90 595 5.89E-11 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 SUPERFAMILY SSF56784 336 626 1.59E-46 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 Gene3D G3DSA:3.40.1110.10 348 459 1.3E-77 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 89 628 3.6E-167 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 339 345 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 Pfam PF00122 E1-E2 ATPase 138 316 2.8E-44 T 11-10-2018 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 Gene3D G3DSA:2.70.150.20 132 243 8.3E-31 T 11-10-2018 ATC04_14730 c7bcd0858cdbafa3fb81817968487579 646 Gene3D G3DSA:3.40.50.1000 318 578 1.3E-77 T 11-10-2018 IPR023214 HAD superfamily ATC04_14090 bb176a40743ffcaa688d47dba04ae292 149 Pfam PF13673 Acetyltransferase (GNAT) domain 18 100 3.3E-9 T 11-10-2018 IPR000182 GNAT domain ATC04_14090 bb176a40743ffcaa688d47dba04ae292 149 Gene3D G3DSA:3.40.630.30 1 141 2.1E-17 T 11-10-2018 ATC04_14090 bb176a40743ffcaa688d47dba04ae292 149 SUPERFAMILY SSF55729 3 133 2.74E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_05405 3d874b06d4eccdccb11c252b1a4f1fae 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 67 4.2E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_05405 3d874b06d4eccdccb11c252b1a4f1fae 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.4E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_05405 3d874b06d4eccdccb11c252b1a4f1fae 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.4E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_05405 3d874b06d4eccdccb11c252b1a4f1fae 209 Gene3D G3DSA:1.10.357.10 74 202 3.8E-29 T 11-10-2018 ATC04_05405 3d874b06d4eccdccb11c252b1a4f1fae 209 Gene3D G3DSA:1.10.10.60 6 73 8.6E-19 T 11-10-2018 ATC04_05405 3d874b06d4eccdccb11c252b1a4f1fae 209 SUPERFAMILY SSF48498 91 201 2.06E-18 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_05405 3d874b06d4eccdccb11c252b1a4f1fae 209 SUPERFAMILY SSF46689 11 94 8.48E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_06485 25f27c2a4c4289ab8ea331e65135b035 159 PRINTS PR00502 NUDIX hydrolase family signature 60 75 3.8E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATC04_06485 25f27c2a4c4289ab8ea331e65135b035 159 PRINTS PR00502 NUDIX hydrolase family signature 46 60 3.8E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATC04_06485 25f27c2a4c4289ab8ea331e65135b035 159 Gene3D G3DSA:3.90.79.10 1 152 2.7E-27 T 11-10-2018 ATC04_06485 25f27c2a4c4289ab8ea331e65135b035 159 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATC04_06485 25f27c2a4c4289ab8ea331e65135b035 159 Pfam PF00293 NUDIX domain 15 139 7.2E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_06485 25f27c2a4c4289ab8ea331e65135b035 159 SUPERFAMILY SSF55811 13 150 5.01E-26 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_16010 6ba0b1b391fd97819b41b48bf7e221be 503 Gene3D G3DSA:1.20.1740.10 20 477 1.0E-42 T 11-10-2018 ATC04_16010 6ba0b1b391fd97819b41b48bf7e221be 503 Pfam PF13520 Amino acid permease 31 444 2.7E-33 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_16010 6ba0b1b391fd97819b41b48bf7e221be 503 PIRSF PIRSF006060 8 498 2.9E-55 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_11415 2dc51e63552077d0d39147ee76f0c31b 529 Pfam PF07690 Major Facilitator Superfamily 6 419 1.2E-42 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_11415 2dc51e63552077d0d39147ee76f0c31b 529 Gene3D G3DSA:1.20.1250.20 268 439 6.5E-12 T 11-10-2018 ATC04_11415 2dc51e63552077d0d39147ee76f0c31b 529 SUPERFAMILY SSF103473 2 514 1.57E-56 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_11415 2dc51e63552077d0d39147ee76f0c31b 529 Gene3D G3DSA:1.20.1720.10 1 214 1.8E-47 T 11-10-2018 ATC04_00150 ecac87510a32e69f054e514225804152 246 Gene3D G3DSA:3.40.50.720 1 243 7.4E-38 T 11-10-2018 ATC04_00150 ecac87510a32e69f054e514225804152 246 SUPERFAMILY SSF51735 2 237 8.2E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_00150 ecac87510a32e69f054e514225804152 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 100 1.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00150 ecac87510a32e69f054e514225804152 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 1.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00150 ecac87510a32e69f054e514225804152 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 47 58 1.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00150 ecac87510a32e69f054e514225804152 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 1.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00150 ecac87510a32e69f054e514225804152 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 158 1.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00150 ecac87510a32e69f054e514225804152 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 2 235 7.4E-18 T 11-10-2018 ATC04_04980 a75ab3b89582889346b20b9972c21df0 193 Pfam PF13302 Acetyltransferase (GNAT) domain 7 145 2.3E-11 T 11-10-2018 IPR000182 GNAT domain ATC04_04980 a75ab3b89582889346b20b9972c21df0 193 SUPERFAMILY SSF55729 5 171 1.54E-30 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_04980 a75ab3b89582889346b20b9972c21df0 193 Gene3D G3DSA:3.40.630.30 1 188 8.7E-40 T 11-10-2018 ATC04_10860 d1b7685bc5ae24c977ac6cc65a4f56b3 368 Pfam PF13692 Glycosyl transferases group 1 197 339 7.9E-19 T 11-10-2018 ATC04_10860 d1b7685bc5ae24c977ac6cc65a4f56b3 368 SUPERFAMILY SSF53756 37 325 1.2E-28 T 11-10-2018 ATC04_10860 d1b7685bc5ae24c977ac6cc65a4f56b3 368 Gene3D G3DSA:3.40.50.2000 190 347 3.8E-27 T 11-10-2018 ATC04_09790 c32e6c54830ae15088450f1cd8b97389 445 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 279 290 2.3E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09790 c32e6c54830ae15088450f1cd8b97389 445 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 350 369 2.3E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09790 c32e6c54830ae15088450f1cd8b97389 445 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 213 439 2.8E-48 T 11-10-2018 ATC04_09790 c32e6c54830ae15088450f1cd8b97389 445 Gene3D G3DSA:3.40.50.720 24 200 3.7E-35 T 11-10-2018 ATC04_09790 c32e6c54830ae15088450f1cd8b97389 445 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 279 290 1.7E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09790 c32e6c54830ae15088450f1cd8b97389 445 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 405 425 1.7E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09790 c32e6c54830ae15088450f1cd8b97389 445 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 225 1.7E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09790 c32e6c54830ae15088450f1cd8b97389 445 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 324 340 1.7E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09790 c32e6c54830ae15088450f1cd8b97389 445 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 350 369 1.7E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09790 c32e6c54830ae15088450f1cd8b97389 445 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 371 388 1.7E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09790 c32e6c54830ae15088450f1cd8b97389 445 Gene3D G3DSA:3.40.50.720 202 444 5.2E-61 T 11-10-2018 ATC04_09790 c32e6c54830ae15088450f1cd8b97389 445 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 207 381 1.9E-6 T 11-10-2018 ATC04_09790 c32e6c54830ae15088450f1cd8b97389 445 SUPERFAMILY SSF51735 203 441 1.28E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_13230 dbd3e4cf492c6c5facb5117ee09b7131 563 SUPERFAMILY SSF52540 16 264 1.25E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13230 dbd3e4cf492c6c5facb5117ee09b7131 563 Pfam PF00005 ABC transporter 36 192 2.4E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_13230 dbd3e4cf492c6c5facb5117ee09b7131 563 SUPERFAMILY SSF52540 294 537 3.55E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13230 dbd3e4cf492c6c5facb5117ee09b7131 563 Pfam PF00005 ABC transporter 315 466 2.4E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_13230 dbd3e4cf492c6c5facb5117ee09b7131 563 Gene3D G3DSA:3.40.50.300 14 291 1.5E-82 T 11-10-2018 ATC04_13230 dbd3e4cf492c6c5facb5117ee09b7131 563 Gene3D G3DSA:3.40.50.300 292 561 3.0E-86 T 11-10-2018 ATC04_13230 dbd3e4cf492c6c5facb5117ee09b7131 563 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 274 2.4E-4 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_13230 dbd3e4cf492c6c5facb5117ee09b7131 563 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 517 549 1.0E-5 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_13230 dbd3e4cf492c6c5facb5117ee09b7131 563 SMART SM00382 323 515 3.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_13230 dbd3e4cf492c6c5facb5117ee09b7131 563 SMART SM00382 44 242 6.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_13230 dbd3e4cf492c6c5facb5117ee09b7131 563 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_13230 dbd3e4cf492c6c5facb5117ee09b7131 563 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 Gene3D G3DSA:1.10.220.30 97 184 7.2E-21 T 11-10-2018 ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 SUPERFAMILY SSF48029 108 319 1.96E-46 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 Pfam PF14841 FliG middle domain 109 180 2.2E-17 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 Gene3D G3DSA:1.10.220.30 1 73 1.0E-14 T 11-10-2018 ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 190 215 1.3E-41 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 30 56 1.3E-41 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 107 130 1.3E-41 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 1 17 1.3E-41 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 221 241 1.3E-41 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 243 263 1.3E-41 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 293 1.3E-41 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 Pfam PF01706 FliG C-terminal domain 213 318 2.4E-28 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 Pfam PF14842 FliG N-terminal domain 1 98 9.7E-19 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 SUPERFAMILY SSF48029 3 112 2.56E-15 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical ATC04_11320 835720c5ab1d2c22914da08e5cfee7d8 329 Gene3D G3DSA:1.10.220.30 190 329 1.1E-35 T 11-10-2018 ATC04_10425 bdee940a1fd14f79275e9cac12156d12 421 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 5 420 2.2E-147 T 11-10-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 ATC04_10425 bdee940a1fd14f79275e9cac12156d12 421 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 55 407 3.3E-83 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 ATC04_10425 bdee940a1fd14f79275e9cac12156d12 421 Pfam PF04261 Dyp-type peroxidase family 55 407 1.5E-95 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 ATC04_10425 bdee940a1fd14f79275e9cac12156d12 421 SUPERFAMILY SSF54909 50 414 1.38E-82 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_07345 602d8cb5abb8285fcb3e73aec47b606e 373 Gene3D G3DSA:3.40.50.2000 164 347 1.0E-97 T 11-10-2018 ATC04_07345 602d8cb5abb8285fcb3e73aec47b606e 373 SUPERFAMILY SSF53756 6 361 1.62E-94 T 11-10-2018 ATC04_07345 602d8cb5abb8285fcb3e73aec47b606e 373 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 363 30.351 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_07345 602d8cb5abb8285fcb3e73aec47b606e 373 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 145 3.2E-35 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_07345 602d8cb5abb8285fcb3e73aec47b606e 373 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 358 2.6E-81 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_07345 602d8cb5abb8285fcb3e73aec47b606e 373 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 192 353 1.4E-32 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 ATC04_07345 602d8cb5abb8285fcb3e73aec47b606e 373 Gene3D G3DSA:3.40.50.2000 8 353 1.0E-97 T 11-10-2018 ATC04_04190 4403965815d2860fde2efa511da03e94 563 ProSitePatterns PS00211 ABC transporters family signature. 449 463 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_04190 4403965815d2860fde2efa511da03e94 563 SUPERFAMILY SSF90123 2 289 8.63E-28 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_04190 4403965815d2860fde2efa511da03e94 563 Gene3D G3DSA:3.40.50.300 305 558 2.0E-69 T 11-10-2018 ATC04_04190 4403965815d2860fde2efa511da03e94 563 SUPERFAMILY SSF52540 308 544 5.33E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_04190 4403965815d2860fde2efa511da03e94 563 Pfam PF00005 ABC transporter 330 477 1.4E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_04190 4403965815d2860fde2efa511da03e94 563 SMART SM00382 339 523 1.9E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04190 4403965815d2860fde2efa511da03e94 563 Gene3D G3DSA:1.20.1560.10 1 299 6.2E-21 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_05450 614e949efc357a09a279105a4d722285 96 Gene3D G3DSA:3.10.20.520 2 66 4.2E-31 T 11-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B ATC04_05450 614e949efc357a09a279105a4d722285 96 PIRSF PIRSF030200 1 96 3.9E-41 T 11-10-2018 IPR009359 Phenylacetic acid degradation B ATC04_05450 614e949efc357a09a279105a4d722285 96 Pfam PF06243 Phenylacetic acid degradation B 6 92 7.7E-38 T 11-10-2018 IPR009359 Phenylacetic acid degradation B ATC04_05450 614e949efc357a09a279105a4d722285 96 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 7 95 5.2E-39 T 11-10-2018 IPR009359 Phenylacetic acid degradation B ATC04_13110 8d71a59ae291605bfe4a4d7bb7fcc71c 327 SUPERFAMILY SSF54814 256 318 4.58E-17 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ATC04_13110 8d71a59ae291605bfe4a4d7bb7fcc71c 327 SUPERFAMILY SSF50249 110 176 6.54E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_13110 8d71a59ae291605bfe4a4d7bb7fcc71c 327 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 76 318 6.1E-96 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 ATC04_13110 8d71a59ae291605bfe4a4d7bb7fcc71c 327 SUPERFAMILY SSF54814 177 255 1.7E-26 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ATC04_13110 8d71a59ae291605bfe4a4d7bb7fcc71c 327 Pfam PF13184 NusA-like KH domain 207 275 2.1E-26 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 ATC04_13110 8d71a59ae291605bfe4a4d7bb7fcc71c 327 Pfam PF08529 NusA N-terminal domain 75 99 3.0E-6 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 ATC04_13110 8d71a59ae291605bfe4a4d7bb7fcc71c 327 Gene3D G3DSA:3.30.300.20 176 254 6.4E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ATC04_13110 8d71a59ae291605bfe4a4d7bb7fcc71c 327 Gene3D G3DSA:3.30.1480.10 1 99 7.4E-30 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 ATC04_13110 8d71a59ae291605bfe4a4d7bb7fcc71c 327 Gene3D G3DSA:2.40.50.140 105 175 1.3E-22 T 11-10-2018 ATC04_13110 8d71a59ae291605bfe4a4d7bb7fcc71c 327 Gene3D G3DSA:3.30.300.20 255 322 1.1E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ATC04_13110 8d71a59ae291605bfe4a4d7bb7fcc71c 327 SUPERFAMILY SSF69705 3 99 2.62E-25 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 ATC04_13110 8d71a59ae291605bfe4a4d7bb7fcc71c 327 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 327 24.504 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 ATC04_17250 cb98d752c9b8912cfac9da4a71628dff 151 SUPERFAMILY SSF46785 3 133 9.98E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_17250 cb98d752c9b8912cfac9da4a71628dff 151 Gene3D G3DSA:1.10.10.10 1 81 7.1E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_17250 cb98d752c9b8912cfac9da4a71628dff 151 Pfam PF01475 Ferric uptake regulator family 11 103 7.3E-19 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ATC04_17250 cb98d752c9b8912cfac9da4a71628dff 151 Gene3D G3DSA:3.30.1490.190 83 142 6.1E-14 T 11-10-2018 ATC04_05590 8c826dfcb69920f36f9fdbaa2bb9211c 124 PRINTS PR00421 Thioredoxin family signature 21 29 6.8E-8 T 11-10-2018 ATC04_05590 8c826dfcb69920f36f9fdbaa2bb9211c 124 PRINTS PR00421 Thioredoxin family signature 68 79 6.8E-8 T 11-10-2018 ATC04_05590 8c826dfcb69920f36f9fdbaa2bb9211c 124 PRINTS PR00421 Thioredoxin family signature 29 38 6.8E-8 T 11-10-2018 ATC04_05590 8c826dfcb69920f36f9fdbaa2bb9211c 124 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ATC04_05590 8c826dfcb69920f36f9fdbaa2bb9211c 124 Gene3D G3DSA:3.40.30.10 1 112 2.2E-29 T 11-10-2018 ATC04_05590 8c826dfcb69920f36f9fdbaa2bb9211c 124 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 2.5E-29 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ATC04_05590 8c826dfcb69920f36f9fdbaa2bb9211c 124 Pfam PF00085 Thioredoxin 4 101 3.4E-26 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 ATC04_05590 8c826dfcb69920f36f9fdbaa2bb9211c 124 PIRSF PIRSF000077 1 104 2.1E-26 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ATC04_05590 8c826dfcb69920f36f9fdbaa2bb9211c 124 SUPERFAMILY SSF52833 4 103 2.81E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_11805 a51112b9bf132d765fd14049857d2c7f 68 Pfam PF00137 ATP synthase subunit C 10 67 1.6E-12 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 ATC04_11805 a51112b9bf132d765fd14049857d2c7f 68 PRINTS PR00124 ATP synthase C subunit signature 5 24 1.1E-17 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11805 a51112b9bf132d765fd14049857d2c7f 68 PRINTS PR00124 ATP synthase C subunit signature 26 41 1.1E-17 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11805 a51112b9bf132d765fd14049857d2c7f 68 PRINTS PR00124 ATP synthase C subunit signature 43 68 1.1E-17 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11805 a51112b9bf132d765fd14049857d2c7f 68 Gene3D G3DSA:1.20.20.10 3 68 4.4E-19 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11805 a51112b9bf132d765fd14049857d2c7f 68 ProSitePatterns PS00605 ATP synthase c subunit signature. 33 54 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11805 a51112b9bf132d765fd14049857d2c7f 68 SUPERFAMILY SSF81333 8 67 7.85E-16 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily ATC04_11805 a51112b9bf132d765fd14049857d2c7f 68 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 68 14.388 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_16530 add9a250d07de15903ce99a5e036b952 250 SMART SM01211 20 245 1.1E-113 T 11-10-2018 ATC04_16530 add9a250d07de15903ce99a5e036b952 250 Gene3D G3DSA:3.40.50.880 21 246 1.7E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_16530 add9a250d07de15903ce99a5e036b952 250 PIRSF PIRSF001586 19 247 7.3E-79 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ATC04_16530 add9a250d07de15903ce99a5e036b952 250 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 22 244 4.6E-74 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ATC04_16530 add9a250d07de15903ce99a5e036b952 250 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 22 226 4.4E-34 T 11-10-2018 ATC04_16530 add9a250d07de15903ce99a5e036b952 250 SUPERFAMILY SSF52317 19 242 2.66E-65 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_16530 add9a250d07de15903ce99a5e036b952 250 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 21 243 36.121 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ATC04_15560 0aae57fddf3760d5bcacda0e563ea0b7 209 Pfam PF14279 HNH endonuclease 20 52 3.9E-9 T 11-10-2018 IPR029471 HNH endonuclease 5 ATC04_15560 0aae57fddf3760d5bcacda0e563ea0b7 209 SMART SM00507 4 49 0.0012 T 11-10-2018 IPR003615 HNH nuclease ATC04_15560 0aae57fddf3760d5bcacda0e563ea0b7 209 Gene3D G3DSA:3.30.40.60 7 79 1.5E-10 T 11-10-2018 ATC04_14150 a4b2b7d7d5bf742577bc1b37129b4df1 494 Pfam PF00171 Aldehyde dehydrogenase family 25 484 2.7E-164 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_14150 a4b2b7d7d5bf742577bc1b37129b4df1 494 Gene3D G3DSA:3.40.605.10 21 482 5.7E-170 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_14150 a4b2b7d7d5bf742577bc1b37129b4df1 494 Gene3D G3DSA:3.40.309.10 266 455 5.7E-170 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_14150 a4b2b7d7d5bf742577bc1b37129b4df1 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ATC04_14150 a4b2b7d7d5bf742577bc1b37129b4df1 494 SUPERFAMILY SSF53720 14 487 1.57E-161 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_01720 d6d9caad973aa5a298a02f03b0c9cd7f 219 Gene3D G3DSA:1.20.120.530 76 217 3.8E-23 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_01720 d6d9caad973aa5a298a02f03b0c9cd7f 219 Gene3D G3DSA:1.10.10.10 11 75 8.1E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_01720 d6d9caad973aa5a298a02f03b0c9cd7f 219 SMART SM00345 18 76 2.1E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_01720 d6d9caad973aa5a298a02f03b0c9cd7f 219 SUPERFAMILY SSF48008 83 217 3.14E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_01720 d6d9caad973aa5a298a02f03b0c9cd7f 219 SMART SM00895 86 210 1.8E-14 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_01720 d6d9caad973aa5a298a02f03b0c9cd7f 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 75 1.6E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_01720 d6d9caad973aa5a298a02f03b0c9cd7f 219 SUPERFAMILY SSF46785 12 101 1.02E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_01720 d6d9caad973aa5a298a02f03b0c9cd7f 219 Pfam PF07729 FCD domain 87 208 3.4E-20 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_05080 f3092e4e969f8e800cd7997f168bda09 611 Gene3D G3DSA:3.40.50.300 345 605 1.9E-74 T 11-10-2018 ATC04_05080 f3092e4e969f8e800cd7997f168bda09 611 Pfam PF00664 ABC transporter transmembrane region 39 305 1.7E-36 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ATC04_05080 f3092e4e969f8e800cd7997f168bda09 611 SUPERFAMILY SSF52540 346 594 9.97E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_05080 f3092e4e969f8e800cd7997f168bda09 611 SMART SM00382 384 574 1.7E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_05080 f3092e4e969f8e800cd7997f168bda09 611 Pfam PF00005 ABC transporter 376 527 2.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_05080 f3092e4e969f8e800cd7997f168bda09 611 Gene3D G3DSA:1.20.1560.10 9 342 4.8E-63 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_05080 f3092e4e969f8e800cd7997f168bda09 611 ProSitePatterns PS00211 ABC transporters family signature. 500 514 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_05080 f3092e4e969f8e800cd7997f168bda09 611 SUPERFAMILY SSF90123 24 334 9.55E-63 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_11975 1bb8327d021f00f2e8e6cf79cfb30df7 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 217 241 3.8E-18 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_11975 1bb8327d021f00f2e8e6cf79cfb30df7 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 3.8E-18 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_11975 1bb8327d021f00f2e8e6cf79cfb30df7 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 3.8E-18 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_11975 1bb8327d021f00f2e8e6cf79cfb30df7 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 3.8E-18 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_11975 1bb8327d021f00f2e8e6cf79cfb30df7 267 Pfam PF00459 Inositol monophosphatase family 7 259 2.8E-48 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_11975 1bb8327d021f00f2e8e6cf79cfb30df7 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site ATC04_11975 1bb8327d021f00f2e8e6cf79cfb30df7 267 Gene3D G3DSA:3.30.540.10 1 140 4.6E-40 T 11-10-2018 ATC04_11975 1bb8327d021f00f2e8e6cf79cfb30df7 267 SUPERFAMILY SSF56655 6 266 9.03E-71 T 11-10-2018 ATC04_11975 1bb8327d021f00f2e8e6cf79cfb30df7 267 Gene3D G3DSA:3.40.190.80 153 266 3.6E-19 T 11-10-2018 ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 4.0E-10 T 11-10-2018 ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-10 T 11-10-2018 ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 Pfam PF00117 Glutamine amidotransferase class-I 7 191 4.3E-49 T 11-10-2018 IPR017926 Glutamine amidotransferase ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 6 193 1.4E-58 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 SUPERFAMILY SSF52317 4 194 6.45E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 7.5E-14 T 11-10-2018 ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 7.5E-14 T 11-10-2018 ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 171 184 7.5E-14 T 11-10-2018 ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 Gene3D G3DSA:3.40.50.880 4 196 1.1E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 PRINTS PR00097 Anthranilate synthase component II signature 53 62 1.8E-33 T 11-10-2018 ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 PRINTS PR00097 Anthranilate synthase component II signature 171 184 1.8E-33 T 11-10-2018 ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 PRINTS PR00097 Anthranilate synthase component II signature 106 114 1.8E-33 T 11-10-2018 ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 PRINTS PR00097 Anthranilate synthase component II signature 126 138 1.8E-33 T 11-10-2018 ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.8E-33 T 11-10-2018 ATC04_00550 1ed3ec798f7a485673e3d23b9890385e 214 PRINTS PR00097 Anthranilate synthase component II signature 6 20 1.8E-33 T 11-10-2018 ATC04_14860 d24e76deede3e3005c0dfaeec61b0ff9 744 Gene3D G3DSA:3.40.718.10 391 646 8.3E-7 T 11-10-2018 ATC04_14860 d24e76deede3e3005c0dfaeec61b0ff9 744 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 738 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ATC04_14860 d24e76deede3e3005c0dfaeec61b0ff9 744 Pfam PF03971 Monomeric isocitrate dehydrogenase 3 735 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ATC04_14860 d24e76deede3e3005c0dfaeec61b0ff9 744 SUPERFAMILY SSF53659 2 737 0.0 T 11-10-2018 ATC04_14860 d24e76deede3e3005c0dfaeec61b0ff9 744 PIRSF PIRSF009407 1 739 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ATC04_17925 0ce213a6637b83c9a7acf651697c3d09 519 SUPERFAMILY SSF56524 228 414 5.36E-55 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 ATC04_17925 0ce213a6637b83c9a7acf651697c3d09 519 SUPERFAMILY SSF81296 408 517 6.58E-19 T 11-10-2018 IPR014756 Immunoglobulin E-set ATC04_17925 0ce213a6637b83c9a7acf651697c3d09 519 Pfam PF00174 Oxidoreductase molybdopterin binding domain 244 393 2.2E-37 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 ATC04_17925 0ce213a6637b83c9a7acf651697c3d09 519 Gene3D G3DSA:3.90.420.10 193 412 2.3E-47 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 ATC04_17925 0ce213a6637b83c9a7acf651697c3d09 519 Gene3D G3DSA:2.60.40.650 413 519 6.1E-20 T 11-10-2018 ATC04_10430 fa8873fcaddee9d4e2c3bf662c45dc4b 394 Pfam PF02803 Thiolase, C-terminal domain 273 392 4.4E-39 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ATC04_10430 fa8873fcaddee9d4e2c3bf662c45dc4b 394 Pfam PF00108 Thiolase, N-terminal domain 11 262 2.0E-74 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ATC04_10430 fa8873fcaddee9d4e2c3bf662c45dc4b 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ATC04_10430 fa8873fcaddee9d4e2c3bf662c45dc4b 394 Gene3D G3DSA:3.40.47.10 146 390 1.4E-126 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_10430 fa8873fcaddee9d4e2c3bf662c45dc4b 394 Gene3D G3DSA:3.40.47.10 12 277 1.4E-126 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_10430 fa8873fcaddee9d4e2c3bf662c45dc4b 394 PIRSF PIRSF000429 5 394 2.5E-106 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_10430 fa8873fcaddee9d4e2c3bf662c45dc4b 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 12 391 7.1E-120 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_10430 fa8873fcaddee9d4e2c3bf662c45dc4b 394 SUPERFAMILY SSF53901 274 393 1.67E-36 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_10430 fa8873fcaddee9d4e2c3bf662c45dc4b 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 90 108 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ATC04_10430 fa8873fcaddee9d4e2c3bf662c45dc4b 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 ATC04_10430 fa8873fcaddee9d4e2c3bf662c45dc4b 394 SUPERFAMILY SSF53901 10 270 2.25E-64 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_13205 2c875f133361aa144b59af9dea5e8754 451 SUPERFAMILY SSF50156 136 251 3.68E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 ATC04_13205 2c875f133361aa144b59af9dea5e8754 451 Gene3D G3DSA:2.30.42.10 187 288 2.7E-15 T 11-10-2018 ATC04_13205 2c875f133361aa144b59af9dea5e8754 451 Pfam PF13180 PDZ domain 190 249 2.4E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ATC04_13205 2c875f133361aa144b59af9dea5e8754 451 SMART SM00228 157 242 0.0012 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ATC04_13205 2c875f133361aa144b59af9dea5e8754 451 Pfam PF02163 Peptidase family M50 13 404 1.0E-42 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 ATC04_05260 f5b9c2a13e8d6effed67722c52614d58 74 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 12 59 3.8E-19 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 ATC04_05260 f5b9c2a13e8d6effed67722c52614d58 74 Pfam PF12728 Helix-turn-helix domain 12 60 4.3E-17 T 11-10-2018 ATC04_05260 f5b9c2a13e8d6effed67722c52614d58 74 SUPERFAMILY SSF46955 11 60 8.79E-7 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_05260 f5b9c2a13e8d6effed67722c52614d58 74 Gene3D G3DSA:1.10.1660.10 9 62 3.6E-11 T 11-10-2018 ATC04_16685 cb886cb12e1133c2d46df18face1cee1 447 SUPERFAMILY SSF56645 61 257 1.96E-35 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_16685 cb886cb12e1133c2d46df18face1cee1 447 SUPERFAMILY SSF47203 271 411 2.72E-10 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_16685 cb886cb12e1133c2d46df18face1cee1 447 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 275 409 2.7E-15 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ATC04_16685 cb886cb12e1133c2d46df18face1cee1 447 Gene3D G3DSA:2.40.110.10 165 257 1.4E-27 T 11-10-2018 ATC04_16685 cb886cb12e1133c2d46df18face1cee1 447 Gene3D G3DSA:1.10.540.10 49 164 1.0E-15 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_16685 cb886cb12e1133c2d46df18face1cee1 447 Gene3D G3DSA:1.20.140.10 258 432 2.3E-49 T 11-10-2018 ATC04_16685 cb886cb12e1133c2d46df18face1cee1 447 PIRSF PIRSF016578 39 263 1.7E-14 T 11-10-2018 ATC04_16685 cb886cb12e1133c2d46df18face1cee1 447 PIRSF PIRSF016578 265 419 2.2E-11 T 11-10-2018 ATC04_16685 cb886cb12e1133c2d46df18face1cee1 447 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 165 254 1.1E-8 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_18330 c0ea604585fc7dd867abbdbddb0e18ab 354 SUPERFAMILY SSF56796 14 351 3.53E-82 T 11-10-2018 ATC04_18330 c0ea604585fc7dd867abbdbddb0e18ab 354 Gene3D G3DSA:1.20.1090.10 163 354 4.3E-60 T 11-10-2018 ATC04_18330 c0ea604585fc7dd867abbdbddb0e18ab 354 Gene3D G3DSA:3.40.50.1970 3 162 2.1E-43 T 11-10-2018 ATC04_18330 c0ea604585fc7dd867abbdbddb0e18ab 354 Pfam PF00465 Iron-containing alcohol dehydrogenase 14 341 7.3E-76 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 ATC04_18570 c0ea604585fc7dd867abbdbddb0e18ab 354 SUPERFAMILY SSF56796 14 351 3.53E-82 T 11-10-2018 ATC04_18570 c0ea604585fc7dd867abbdbddb0e18ab 354 Gene3D G3DSA:1.20.1090.10 163 354 4.3E-60 T 11-10-2018 ATC04_18570 c0ea604585fc7dd867abbdbddb0e18ab 354 Gene3D G3DSA:3.40.50.1970 3 162 2.1E-43 T 11-10-2018 ATC04_18570 c0ea604585fc7dd867abbdbddb0e18ab 354 Pfam PF00465 Iron-containing alcohol dehydrogenase 14 341 7.3E-76 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 ATC04_01940 12493e657d619bc4cc4eef434ae377a2 325 SUPERFAMILY SSF53807 34 309 1.33E-49 T 11-10-2018 ATC04_01940 12493e657d619bc4cc4eef434ae377a2 325 Gene3D G3DSA:3.40.50.12260 187 298 6.4E-63 T 11-10-2018 ATC04_01940 12493e657d619bc4cc4eef434ae377a2 325 Gene3D G3DSA:3.40.50.1980 49 315 6.4E-63 T 11-10-2018 ATC04_01940 12493e657d619bc4cc4eef434ae377a2 325 Pfam PF01497 Periplasmic binding protein 55 300 5.0E-39 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ATC04_05330 9925161aa5fb1f537fb35abaacc55333 320 TIGRFAM TIGR01929 menB: naphthoate synthase 52 316 7.6E-117 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 ATC04_05330 9925161aa5fb1f537fb35abaacc55333 320 Gene3D G3DSA:3.90.226.10 14 259 4.1E-79 T 11-10-2018 ATC04_05330 9925161aa5fb1f537fb35abaacc55333 320 Gene3D G3DSA:1.10.12.10 260 308 3.7E-27 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ATC04_05330 9925161aa5fb1f537fb35abaacc55333 320 SUPERFAMILY SSF52096 53 317 4.11E-69 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_05330 9925161aa5fb1f537fb35abaacc55333 320 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 22 319 51.739 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 ATC04_05330 9925161aa5fb1f537fb35abaacc55333 320 Pfam PF00378 Enoyl-CoA hydratase/isomerase 55 314 1.7E-46 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ATC04_12380 f79036913ec84378be989831d58c68c6 560 TIGRFAM TIGR00337 PyrG: CTP synthase 15 553 3.9E-225 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ATC04_12380 f79036913ec84378be989831d58c68c6 560 Hamap MF_01227 CTP synthase [pyrG]. 16 558 49.233 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ATC04_12380 f79036913ec84378be989831d58c68c6 560 Pfam PF00117 Glutamine amidotransferase class-I 321 552 4.7E-46 T 11-10-2018 IPR017926 Glutamine amidotransferase ATC04_12380 f79036913ec84378be989831d58c68c6 560 SUPERFAMILY SSF52317 308 557 1.34E-72 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_12380 f79036913ec84378be989831d58c68c6 560 Gene3D G3DSA:3.40.50.880 306 560 3.0E-95 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_12380 f79036913ec84378be989831d58c68c6 560 Gene3D G3DSA:3.40.50.300 8 305 2.0E-130 T 11-10-2018 ATC04_12380 f79036913ec84378be989831d58c68c6 560 SUPERFAMILY SSF52540 16 286 3.07E-116 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12380 f79036913ec84378be989831d58c68c6 560 Pfam PF06418 CTP synthase N-terminus 17 286 8.4E-121 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ATC04_13050 dc7409bfe5224f3c90713dcbefa79979 284 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 166 209 5.5E-13 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 ATC04_13050 dc7409bfe5224f3c90713dcbefa79979 284 SUPERFAMILY SSF55120 1 209 2.72E-66 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_13050 dc7409bfe5224f3c90713dcbefa79979 284 Gene3D G3DSA:3.30.2350.10 1 211 1.5E-83 T 11-10-2018 ATC04_13050 dc7409bfe5224f3c90713dcbefa79979 284 Pfam PF09142 tRNA Pseudouridine synthase II, C terminal 221 281 2.0E-14 T 11-10-2018 IPR015225 tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_13050 dc7409bfe5224f3c90713dcbefa79979 284 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 11 165 5.0E-52 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 ATC04_13050 dc7409bfe5224f3c90713dcbefa79979 284 Gene3D G3DSA:2.30.130.10 213 281 2.7E-7 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 ATC04_13050 dc7409bfe5224f3c90713dcbefa79979 284 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 281 14.961 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_13050 dc7409bfe5224f3c90713dcbefa79979 284 SUPERFAMILY SSF88697 221 281 5.47E-8 T 11-10-2018 IPR015947 PUA-like superfamily ATC04_13050 dc7409bfe5224f3c90713dcbefa79979 284 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 1 204 5.8E-65 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 SUPERFAMILY SSF54810 407 528 1.44E-46 T 11-10-2018 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 SUPERFAMILY SSF52402 189 448 2.43E-54 T 11-10-2018 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 Pfam PF00117 Glutamine amidotransferase class-I 15 195 3.9E-38 T 11-10-2018 IPR017926 Glutamine amidotransferase ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 Gene3D G3DSA:3.30.300.10 408 528 1.2E-50 T 11-10-2018 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 Pfam PF02540 NAD synthase 219 251 5.0E-6 T 11-10-2018 IPR022310 NAD/GMP synthase ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 SUPERFAMILY SSF52317 9 233 1.3E-52 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 13 196 1.2E-70 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 PRINTS PR00097 Anthranilate synthase component II signature 173 186 2.9E-5 T 11-10-2018 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 PRINTS PR00097 Anthranilate synthase component II signature 84 95 2.9E-5 T 11-10-2018 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 PRINTS PR00097 Anthranilate synthase component II signature 57 66 2.9E-5 T 11-10-2018 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 Gene3D G3DSA:3.40.50.620 206 407 2.2E-69 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 528 7.5E-141 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 1.6E-6 T 11-10-2018 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 PRINTS PR00096 Glutamine amidotransferase superfamily signature 57 66 1.6E-6 T 11-10-2018 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 PRINTS PR00096 Glutamine amidotransferase superfamily signature 84 95 1.6E-6 T 11-10-2018 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 Gene3D G3DSA:3.40.50.880 10 205 4.4E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 10 528 52.808 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 Pfam PF00958 GMP synthase C terminal domain 436 527 1.9E-38 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 84 100 3.3E-5 T 11-10-2018 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 54 68 3.3E-5 T 11-10-2018 ATC04_06445 08b404a0f527b2374a4c5cce0a8c9367 528 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 13 27 3.3E-5 T 11-10-2018 ATC04_00515 e6efd56cf8bfeae8130f162a2a07970f 277 Gene3D G3DSA:2.60.200.20 149 274 3.6E-26 T 11-10-2018 ATC04_00515 e6efd56cf8bfeae8130f162a2a07970f 277 SMART SM00240 194 245 1.2E-11 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ATC04_00515 e6efd56cf8bfeae8130f162a2a07970f 277 Pfam PF12401 Protein of unknown function (DUF2662) 4 117 8.0E-31 T 11-10-2018 IPR022128 Domain of unknown function DUF3662 ATC04_00515 e6efd56cf8bfeae8130f162a2a07970f 277 SUPERFAMILY SSF49879 156 270 1.15E-25 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ATC04_00515 e6efd56cf8bfeae8130f162a2a07970f 277 Pfam PF00498 FHA domain 196 260 9.1E-18 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ATC04_00515 e6efd56cf8bfeae8130f162a2a07970f 277 Gene3D G3DSA:3.30.2320.60 1 127 5.6E-33 T 11-10-2018 ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 PIRSF PIRSF000171 1 583 7.9E-54 T 11-10-2018 ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 595 1.3E-42 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 SUPERFAMILY SSF56425 245 363 4.64E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 Gene3D G3DSA:3.90.700.10 255 358 4.2E-159 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 595 1.9E-243 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 SUPERFAMILY SSF51905 2 445 1.0E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 SUPERFAMILY SSF46977 455 595 1.44E-49 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 4 595 7.7E-279 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 Gene3D G3DSA:3.50.50.60 7 420 4.2E-159 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 Gene3D G3DSA:1.20.58.100 438 550 5.4E-37 T 11-10-2018 ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 40 49 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 372 394 4.3E-7 T 11-10-2018 ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.3E-7 T 11-10-2018 ATC04_14480 0b2e6e4f0f04560448c55af39d68bd9a 595 Pfam PF00890 FAD binding domain 7 409 6.3E-112 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_07015 94c20b18d7cad1e7dbfde2d406399d43 203 Gene3D G3DSA:3.30.2010.10 87 173 2.4E-11 T 11-10-2018 ATC04_07015 94c20b18d7cad1e7dbfde2d406399d43 203 Pfam PF01863 Protein of unknown function DUF45 67 163 1.4E-16 T 11-10-2018 IPR002725 Protein of unknown function DUF45 ATC04_05410 ea52e5b5a593916b61d4c04cfefdc948 439 Pfam PF14535 AMP-binding enzyme C-terminal domain 344 437 5.4E-24 T 11-10-2018 IPR028154 AMP-dependent ligase, C-terminal ATC04_05410 ea52e5b5a593916b61d4c04cfefdc948 439 Gene3D G3DSA:3.30.300.30 336 439 9.9E-29 T 11-10-2018 ATC04_05410 ea52e5b5a593916b61d4c04cfefdc948 439 PIRSF PIRSF006444 8 439 6.4E-186 T 11-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 ATC04_05410 ea52e5b5a593916b61d4c04cfefdc948 439 SUPERFAMILY SSF56801 54 403 1.24E-57 T 11-10-2018 ATC04_05410 ea52e5b5a593916b61d4c04cfefdc948 439 Pfam PF00501 AMP-binding enzyme 88 298 7.9E-11 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_05410 ea52e5b5a593916b61d4c04cfefdc948 439 Gene3D G3DSA:3.40.50.12780 6 335 1.4E-125 T 11-10-2018 ATC04_08550 be876b3ce873420e6f77015d9f4917fa 411 SUPERFAMILY SSF52113 339 409 1.74E-9 T 11-10-2018 IPR036420 BRCT domain superfamily ATC04_08550 be876b3ce873420e6f77015d9f4917fa 411 Gene3D G3DSA:3.40.50.10190 335 411 2.5E-14 T 11-10-2018 IPR036420 BRCT domain superfamily ATC04_08550 be876b3ce873420e6f77015d9f4917fa 411 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 352 408 1.1E-4 T 11-10-2018 IPR001357 BRCT domain ATC04_08550 be876b3ce873420e6f77015d9f4917fa 411 SUPERFAMILY SSF158682 241 316 1.48E-7 T 11-10-2018 IPR029024 TerB-like ATC04_08550 be876b3ce873420e6f77015d9f4917fa 411 SUPERFAMILY SSF53098 6 173 9.49E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_08550 be876b3ce873420e6f77015d9f4917fa 411 Pfam PF00929 Exonuclease 8 163 3.4E-23 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ATC04_08550 be876b3ce873420e6f77015d9f4917fa 411 SMART SM00479 5 173 2.2E-28 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ATC04_08550 be876b3ce873420e6f77015d9f4917fa 411 Gene3D G3DSA:3.30.420.10 3 173 9.1E-42 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_11295 8bdfe46b17de470aa6ac6ae53d1e5c5f 412 Pfam PF02120 Flagellar hook-length control protein FliK 266 326 1.9E-7 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal ATC04_11295 8bdfe46b17de470aa6ac6ae53d1e5c5f 412 Gene3D G3DSA:3.30.750.140 240 354 2.8E-7 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily ATC04_05115 b539c6682eef3e57e6fd41ef549cb3b5 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 9 146 2.2E-58 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATC04_05115 b539c6682eef3e57e6fd41ef549cb3b5 150 PIRSF PIRSF001399 5 150 3.0E-61 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATC04_05115 b539c6682eef3e57e6fd41ef549cb3b5 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 68.665 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATC04_05115 b539c6682eef3e57e6fd41ef549cb3b5 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 22 145 1.0E-41 T 11-10-2018 ATC04_05115 b539c6682eef3e57e6fd41ef549cb3b5 150 Gene3D G3DSA:3.40.50.9100 2 150 4.0E-65 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATC04_05115 b539c6682eef3e57e6fd41ef549cb3b5 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 12 29 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATC04_05115 b539c6682eef3e57e6fd41ef549cb3b5 150 SUPERFAMILY SSF52304 8 149 1.03E-59 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATC04_05115 b539c6682eef3e57e6fd41ef549cb3b5 150 Pfam PF01220 Dehydroquinase class II 9 144 1.5E-61 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATC04_05875 1a21899b35d91562b4dea39fcadbd84d 274 SUPERFAMILY SSF81301 40 234 3.27E-59 T 11-10-2018 ATC04_05875 1a21899b35d91562b4dea39fcadbd84d 274 SMART SM00954 78 201 5.5E-45 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 ATC04_05875 1a21899b35d91562b4dea39fcadbd84d 274 Gene3D G3DSA:1.10.287.860 184 244 1.5E-19 T 11-10-2018 ATC04_05875 1a21899b35d91562b4dea39fcadbd84d 274 Gene3D G3DSA:3.30.460.10 32 182 4.8E-49 T 11-10-2018 ATC04_05875 1a21899b35d91562b4dea39fcadbd84d 274 Pfam PF04607 Region found in RelA / SpoT proteins 78 199 1.6E-36 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 ATC04_15140 5c219d94395b5540f1de2d5f89e9b66a 168 SMART SM00347 31 133 5.1E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_15140 5c219d94395b5540f1de2d5f89e9b66a 168 Pfam PF01047 MarR family 41 96 3.3E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_15140 5c219d94395b5540f1de2d5f89e9b66a 168 SUPERFAMILY SSF46785 12 149 6.26E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_15140 5c219d94395b5540f1de2d5f89e9b66a 168 Gene3D G3DSA:1.10.10.10 5 150 1.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03590 edde8c0b67fb75a55344923ecadf28ca 281 PIRSF PIRSF015582 2 281 6.2E-57 T 11-10-2018 IPR011206 Citrate lyase beta subunit-like ATC04_03590 edde8c0b67fb75a55344923ecadf28ca 281 Gene3D G3DSA:3.20.20.60 5 278 7.0E-56 T 11-10-2018 ATC04_03590 edde8c0b67fb75a55344923ecadf28ca 281 SUPERFAMILY SSF51621 15 229 6.63E-48 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ATC04_03590 edde8c0b67fb75a55344923ecadf28ca 281 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 217 4.0E-25 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ATC04_05165 0bf66f33ab334082ad1992bc7c3abe30 60 Pfam PF14029 Protein of unknown function (DUF4244) 7 59 1.5E-22 T 11-10-2018 IPR025338 Protein of unknown function DUF4244 ATC04_08915 5aa4ed6012efa3c52fdb93e9e92e6dcb 92 ProSitePatterns PS00194 Thioredoxin family active site. 17 35 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ATC04_08915 5aa4ed6012efa3c52fdb93e9e92e6dcb 92 Pfam PF00462 Glutaredoxin 17 72 1.6E-13 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ATC04_08915 5aa4ed6012efa3c52fdb93e9e92e6dcb 92 TIGRFAM TIGR02200 GlrX_actino: glutaredoxin-like protein 17 90 3.2E-26 T 11-10-2018 IPR011915 Glutaredoxin-like protein, actinobacteria ATC04_08915 5aa4ed6012efa3c52fdb93e9e92e6dcb 92 SUPERFAMILY SSF52833 17 83 2.74E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_08915 5aa4ed6012efa3c52fdb93e9e92e6dcb 92 Gene3D G3DSA:3.40.30.10 15 92 7.8E-21 T 11-10-2018 ATC04_13100 a5f0bbd5bb0c406f29b0a4f93062a479 146 Gene3D G3DSA:3.30.300.20 2 117 2.9E-26 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ATC04_13100 a5f0bbd5bb0c406f29b0a4f93062a479 146 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 96 1.0E-25 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ATC04_13100 a5f0bbd5bb0c406f29b0a4f93062a479 146 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 109 21.902 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ATC04_13100 a5f0bbd5bb0c406f29b0a4f93062a479 146 SUPERFAMILY SSF89919 1 112 2.75E-29 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily ATC04_13100 a5f0bbd5bb0c406f29b0a4f93062a479 146 ProSitePatterns PS01319 Ribosome-binding factor A signature. 75 96 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 ATC04_13100 a5f0bbd5bb0c406f29b0a4f93062a479 146 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 110 1.8E-20 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ATC04_13100 a5f0bbd5bb0c406f29b0a4f93062a479 146 Pfam PF02033 Ribosome-binding factor A 6 109 8.7E-25 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ATC04_12005 cc30ce7bd3821b6b6750d608c62b7fb2 159 Pfam PF01668 SmpB protein 11 152 8.4E-58 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 ATC04_12005 cc30ce7bd3821b6b6750d608c62b7fb2 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 151 3.3E-56 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 ATC04_12005 cc30ce7bd3821b6b6750d608c62b7fb2 159 ProSitePatterns PS01317 SsrA-binding protein. 29 41 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site ATC04_12005 cc30ce7bd3821b6b6750d608c62b7fb2 159 SUPERFAMILY SSF74982 4 134 4.71E-49 T 11-10-2018 IPR023620 Small protein B ATC04_12005 cc30ce7bd3821b6b6750d608c62b7fb2 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 134 1.0E-40 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 ATC04_12005 cc30ce7bd3821b6b6750d608c62b7fb2 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 157 69.95 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 ATC04_12005 cc30ce7bd3821b6b6750d608c62b7fb2 159 Gene3D G3DSA:2.40.280.10 3 130 3.2E-48 T 11-10-2018 IPR023620 Small protein B ATC04_16710 aba43c6442bc8c7a7aa571fbdf1d01c6 627 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 544 1.2E-145 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ATC04_16710 aba43c6442bc8c7a7aa571fbdf1d01c6 627 ProSitePatterns PS01303 BCCT family of transporters signature. 342 351 - T 11-10-2018 IPR018093 BCCT transporter, conserved site ATC04_16710 aba43c6442bc8c7a7aa571fbdf1d01c6 627 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 35 543 8.9E-169 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ATC04_09605 cb9931b6b57ac824749523dde0ac6a47 282 PIRSF PIRSF018249 1 281 8.4E-65 T 11-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 ATC04_09605 cb9931b6b57ac824749523dde0ac6a47 282 SUPERFAMILY SSF53335 9 266 4.1E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_09605 cb9931b6b57ac824749523dde0ac6a47 282 Gene3D G3DSA:3.40.50.150 6 280 2.2E-52 T 11-10-2018 ATC04_05565 0a0454b012b0d4ea3e2afc2bc3ac5c9e 447 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 28 443 4.0E-173 T 11-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 ATC04_05565 0a0454b012b0d4ea3e2afc2bc3ac5c9e 447 PIRSF PIRSF000521 142 445 3.8E-32 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_05565 0a0454b012b0d4ea3e2afc2bc3ac5c9e 447 PIRSF PIRSF000521 4 148 2.9E-8 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_05565 0a0454b012b0d4ea3e2afc2bc3ac5c9e 447 Gene3D G3DSA:3.90.1150.10 19 438 6.5E-165 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_05565 0a0454b012b0d4ea3e2afc2bc3ac5c9e 447 SUPERFAMILY SSF53383 38 443 2.39E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_05565 0a0454b012b0d4ea3e2afc2bc3ac5c9e 447 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 258 295 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_05565 0a0454b012b0d4ea3e2afc2bc3ac5c9e 447 Pfam PF00202 Aminotransferase class-III 43 442 1.6E-122 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_05565 0a0454b012b0d4ea3e2afc2bc3ac5c9e 447 Gene3D G3DSA:3.40.640.10 77 341 6.5E-165 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_00885 00843f92c0753895066988c19054033a 534 Pfam PF00501 AMP-binding enzyme 17 434 4.0E-96 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_00885 00843f92c0753895066988c19054033a 534 Gene3D G3DSA:3.30.300.310 430 533 4.1E-35 T 11-10-2018 ATC04_00885 00843f92c0753895066988c19054033a 534 Gene3D G3DSA:3.40.50.12780 2 429 9.2E-110 T 11-10-2018 ATC04_00885 00843f92c0753895066988c19054033a 534 Pfam PF13193 AMP-binding enzyme C-terminal domain 443 518 3.0E-20 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ATC04_00885 00843f92c0753895066988c19054033a 534 SUPERFAMILY SSF56801 8 530 6.67E-143 T 11-10-2018 ATC04_00885 00843f92c0753895066988c19054033a 534 ProSitePatterns PS00455 Putative AMP-binding domain signature. 180 191 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_13715 ffbd0ae87435d6f73bf2bfcc4781c0c8 334 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_13715 ffbd0ae87435d6f73bf2bfcc4781c0c8 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 325 5.4E-22 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_13715 ffbd0ae87435d6f73bf2bfcc4781c0c8 334 SUPERFAMILY SSF52540 11 261 1.96E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13715 ffbd0ae87435d6f73bf2bfcc4781c0c8 334 SMART SM00382 40 240 4.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_13715 ffbd0ae87435d6f73bf2bfcc4781c0c8 334 Gene3D G3DSA:3.40.50.300 9 333 2.3E-94 T 11-10-2018 ATC04_13715 ffbd0ae87435d6f73bf2bfcc4781c0c8 334 Pfam PF00005 ABC transporter 32 190 4.7E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_13715 ffbd0ae87435d6f73bf2bfcc4781c0c8 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 306 1.6E-18 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_12805 40d6650aaad1980a4be0b7f7672fee69 387 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 146 240 4.1E-10 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 ATC04_12805 40d6650aaad1980a4be0b7f7672fee69 387 SUPERFAMILY SSF55347 140 266 2.62E-29 T 11-10-2018 ATC04_12805 40d6650aaad1980a4be0b7f7672fee69 387 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 16 132 1.5E-27 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ATC04_12805 40d6650aaad1980a4be0b7f7672fee69 387 SUPERFAMILY SSF51735 11 164 5.47E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_12805 40d6650aaad1980a4be0b7f7672fee69 387 Gene3D G3DSA:3.40.50.720 19 337 2.4E-95 T 11-10-2018 ATC04_12805 40d6650aaad1980a4be0b7f7672fee69 387 Gene3D G3DSA:3.30.360.10 139 360 2.4E-95 T 11-10-2018 ATC04_12560 31c20fbc494f9d92c15d389bff91dc33 292 SUPERFAMILY SSF55315 9 110 1.18E-14 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ATC04_12560 31c20fbc494f9d92c15d389bff91dc33 292 Gene3D G3DSA:3.40.1280.10 112 292 2.6E-47 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATC04_12560 31c20fbc494f9d92c15d389bff91dc33 292 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 35 112 2.2E-6 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ATC04_12560 31c20fbc494f9d92c15d389bff91dc33 292 Pfam PF00588 SpoU rRNA Methylase family 124 285 2.8E-31 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ATC04_12560 31c20fbc494f9d92c15d389bff91dc33 292 Gene3D G3DSA:3.30.1330.30 8 111 1.0E-13 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ATC04_12560 31c20fbc494f9d92c15d389bff91dc33 292 SUPERFAMILY SSF75217 118 291 6.54E-35 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ATC04_12560 31c20fbc494f9d92c15d389bff91dc33 292 SMART SM00967 35 113 1.3E-8 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ATC04_05220 48dc54d1d21d3fe32fcd7d049a6cc905 275 SUPERFAMILY SSF51658 12 242 7.88E-38 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ATC04_05220 48dc54d1d21d3fe32fcd7d049a6cc905 275 Pfam PF01261 Xylose isomerase-like TIM barrel 29 215 4.3E-20 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ATC04_05220 48dc54d1d21d3fe32fcd7d049a6cc905 275 Gene3D G3DSA:3.20.20.150 3 269 5.7E-40 T 11-10-2018 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 Gene3D G3DSA:1.20.210.10 18 544 7.5E-203 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 SUPERFAMILY SSF81442 26 538 3.4E-175 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 PRINTS PR01165 Cytochrome c oxidase subunit I signature 389 408 6.0E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 PRINTS PR01165 Cytochrome c oxidase subunit I signature 147 159 6.0E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 PRINTS PR01165 Cytochrome c oxidase subunit I signature 29 54 6.0E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 PRINTS PR01165 Cytochrome c oxidase subunit I signature 361 379 6.0E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 PRINTS PR01165 Cytochrome c oxidase subunit I signature 439 460 6.0E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 PRINTS PR01165 Cytochrome c oxidase subunit I signature 208 227 6.0E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 347 6.0E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 PRINTS PR01165 Cytochrome c oxidase subunit I signature 237 258 6.0E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 PRINTS PR01165 Cytochrome c oxidase subunit I signature 104 128 6.0E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 PRINTS PR01165 Cytochrome c oxidase subunit I signature 304 319 6.0E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 PRINTS PR01165 Cytochrome c oxidase subunit I signature 179 197 6.0E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 PRINTS PR01165 Cytochrome c oxidase subunit I signature 258 279 6.0E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 PRINTS PR01165 Cytochrome c oxidase subunit I signature 77 100 6.0E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 260 314 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 38 483 1.4E-148 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09510 cf4a498cb1459b82d57013d93a37a231 572 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 31 535 3.7E-209 T 11-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 ATC04_11790 218a0a59a0ce9d11d30a68741a2f06f1 545 SUPERFAMILY SSF50615 26 98 2.94E-22 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_11790 218a0a59a0ce9d11d30a68741a2f06f1 545 Gene3D G3DSA:2.40.30.20 4 97 3.5E-25 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_11790 218a0a59a0ce9d11d30a68741a2f06f1 545 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 511 1.9E-237 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11790 218a0a59a0ce9d11d30a68741a2f06f1 545 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_11790 218a0a59a0ce9d11d30a68741a2f06f1 545 Gene3D G3DSA:1.20.150.20 384 512 1.3E-48 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11790 218a0a59a0ce9d11d30a68741a2f06f1 545 SUPERFAMILY SSF52540 100 382 1.22E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11790 218a0a59a0ce9d11d30a68741a2f06f1 545 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 512 48.041 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11790 218a0a59a0ce9d11d30a68741a2f06f1 545 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 507 9.8E-46 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11790 218a0a59a0ce9d11d30a68741a2f06f1 545 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 31 96 7.7E-14 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_11790 218a0a59a0ce9d11d30a68741a2f06f1 545 Gene3D G3DSA:3.40.50.300 98 383 1.1E-116 T 11-10-2018 ATC04_11790 218a0a59a0ce9d11d30a68741a2f06f1 545 SUPERFAMILY SSF47917 385 511 2.88E-45 T 11-10-2018 ATC04_11790 218a0a59a0ce9d11d30a68741a2f06f1 545 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 153 376 4.1E-67 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_00360 31637be1083167285035d792285103a2 482 ProSitePatterns PS00218 Amino acid permeases signature. 44 75 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ATC04_00360 31637be1083167285035d792285103a2 482 PIRSF PIRSF006060 1 479 4.6E-81 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_00360 31637be1083167285035d792285103a2 482 Gene3D G3DSA:1.20.1740.10 11 470 1.2E-63 T 11-10-2018 ATC04_00360 31637be1083167285035d792285103a2 482 Pfam PF00324 Amino acid permease 19 471 5.1E-133 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ATC04_13305 fd6d7c842a58c48e06a06b3399181c92 535 Pfam PF00474 Sodium:solute symporter family 45 453 2.8E-93 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ATC04_13305 fd6d7c842a58c48e06a06b3399181c92 535 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 45 453 1.9E-59 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ATC04_13305 fd6d7c842a58c48e06a06b3399181c92 535 Gene3D G3DSA:1.20.1730.10 31 498 4.8E-57 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 SUPERFAMILY SSF51735 4 169 9.01E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 PIRSF PIRSF000149 1 334 6.5E-130 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 8.1E-132 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 SUPERFAMILY SSF55347 153 315 2.08E-68 T 11-10-2018 ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 103 1.1E-34 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 3.7E-65 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 Gene3D G3DSA:3.30.360.10 152 322 1.7E-147 T 11-10-2018 ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 Gene3D G3DSA:3.40.50.720 4 328 1.7E-147 T 11-10-2018 ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 SMART SM00846 3 153 4.0E-84 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 3.6E-37 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 3.6E-37 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 3.6E-37 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 3.6E-37 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08205 e6d00a91908750f6f95e1a1582773447 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 3.6E-37 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 Gene3D G3DSA:3.90.650.10 597 769 1.5E-34 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 Gene3D G3DSA:3.90.650.10 43 384 5.6E-122 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 Gene3D G3DSA:3.30.1330.10 57 211 5.6E-122 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 SUPERFAMILY SSF55326 421 591 4.97E-54 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 31 768 3.5E-253 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 Pfam PF02769 AIR synthase related protein, C-terminal domain 220 375 1.8E-28 T 11-10-2018 IPR010918 PurM-like, C-terminal domain ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 Pfam PF02769 AIR synthase related protein, C-terminal domain 601 741 4.8E-20 T 11-10-2018 IPR010918 PurM-like, C-terminal domain ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 SUPERFAMILY SSF56042 601 769 1.79E-34 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 Gene3D G3DSA:3.30.1330.10 411 588 6.1E-56 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 PIRSF PIRSF001587 11 770 4.2E-281 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 Pfam PF00586 AIR synthase related protein, N-terminal domain 105 206 8.5E-21 T 11-10-2018 IPR016188 PurM-like, N-terminal domain ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 Pfam PF00586 AIR synthase related protein, N-terminal domain 466 584 2.4E-21 T 11-10-2018 IPR016188 PurM-like, N-terminal domain ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 SUPERFAMILY SSF56042 218 452 1.21E-49 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 SUPERFAMILY SSF55326 26 211 1.36E-45 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ATC04_16535 c52fab57217165ebe0d2f3ddacbdd84e 770 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 770 291.274 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ATC04_09285 37e3c5e1a9de47949b31c71071b9cee9 280 SMART SM00934 20 268 3.6E-31 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ATC04_09285 37e3c5e1a9de47949b31c71071b9cee9 280 Gene3D G3DSA:3.20.20.70 6 279 1.4E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_09285 37e3c5e1a9de47949b31c71071b9cee9 280 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 5 278 32.236 T 11-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09285 37e3c5e1a9de47949b31c71071b9cee9 280 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 7 267 1.0E-81 T 11-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09285 37e3c5e1a9de47949b31c71071b9cee9 280 SUPERFAMILY SSF51366 7 273 1.65E-60 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ATC04_09285 37e3c5e1a9de47949b31c71071b9cee9 280 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 20 266 1.2E-31 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ATC04_09285 37e3c5e1a9de47949b31c71071b9cee9 280 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 94 107 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ATC04_13685 9d5e1a7a59ba7041c58699368d3db1c8 301 Gene3D G3DSA:3.40.190.10 167 269 2.6E-20 T 11-10-2018 ATC04_13685 9d5e1a7a59ba7041c58699368d3db1c8 301 SUPERFAMILY SSF53850 90 298 3.44E-23 T 11-10-2018 ATC04_13685 9d5e1a7a59ba7041c58699368d3db1c8 301 SUPERFAMILY SSF46785 1 110 4.44E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_13685 9d5e1a7a59ba7041c58699368d3db1c8 301 Gene3D G3DSA:3.40.190.10 93 278 2.6E-20 T 11-10-2018 ATC04_13685 9d5e1a7a59ba7041c58699368d3db1c8 301 Gene3D G3DSA:1.10.10.10 1 91 7.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_13685 9d5e1a7a59ba7041c58699368d3db1c8 301 Pfam PF03466 LysR substrate binding domain 89 294 1.3E-19 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_13685 9d5e1a7a59ba7041c58699368d3db1c8 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.8E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_15915 bd6db77d6e9a903350f3b556ca91430c 255 Pfam PF02665 Nitrate reductase gamma subunit 7 225 5.3E-86 T 11-10-2018 IPR023234 NarG-like domain ATC04_15915 bd6db77d6e9a903350f3b556ca91430c 255 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 6 225 4.6E-58 T 11-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 ATC04_15915 bd6db77d6e9a903350f3b556ca91430c 255 Gene3D G3DSA:1.20.950.20 4 217 4.9E-77 T 11-10-2018 ATC04_15915 bd6db77d6e9a903350f3b556ca91430c 255 SUPERFAMILY SSF103501 6 225 2.48E-67 T 11-10-2018 IPR036197 NarG-like superfamily ATC04_09105 8f1bd0d9824e711964ffceb60b2c9fec 203 ProSitePatterns PS01236 PdxT/SNO family family signature. 41 51 - T 11-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ATC04_09105 8f1bd0d9824e711964ffceb60b2c9fec 203 SUPERFAMILY SSF52317 4 198 1.38E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_09105 8f1bd0d9824e711964ffceb60b2c9fec 203 Pfam PF01174 SNO glutamine amidotransferase family 6 197 1.6E-49 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ATC04_09105 8f1bd0d9824e711964ffceb60b2c9fec 203 Gene3D G3DSA:3.40.50.880 3 202 2.7E-66 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_09105 8f1bd0d9824e711964ffceb60b2c9fec 203 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 198 35.678 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ATC04_09105 8f1bd0d9824e711964ffceb60b2c9fec 203 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 5 197 1.4E-59 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ATC04_09105 8f1bd0d9824e711964ffceb60b2c9fec 203 PIRSF PIRSF005639 1 203 3.1E-65 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ATC04_04390 985c411eb5e4ef1f150695182119dc5a 86 SUPERFAMILY SSF52833 2 82 2.09E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_04390 985c411eb5e4ef1f150695182119dc5a 86 Gene3D G3DSA:3.40.30.10 1 84 2.5E-8 T 11-10-2018 ATC04_10695 9fb6f7d1df94baf228f6146d0ba55247 343 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 27 337 6.0E-69 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 ATC04_10695 9fb6f7d1df94baf228f6146d0ba55247 343 Gene3D G3DSA:3.90.650.10 164 337 5.1E-43 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ATC04_10695 9fb6f7d1df94baf228f6146d0ba55247 343 Pfam PF02769 AIR synthase related protein, C-terminal domain 170 275 1.7E-6 T 11-10-2018 IPR010918 PurM-like, C-terminal domain ATC04_10695 9fb6f7d1df94baf228f6146d0ba55247 343 SUPERFAMILY SSF55326 12 158 2.27E-25 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ATC04_10695 9fb6f7d1df94baf228f6146d0ba55247 343 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 15 337 23.602 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 ATC04_10695 9fb6f7d1df94baf228f6146d0ba55247 343 PIRSF PIRSF005303 11 337 1.9E-72 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 ATC04_10695 9fb6f7d1df94baf228f6146d0ba55247 343 Pfam PF00586 AIR synthase related protein, N-terminal domain 39 158 1.7E-18 T 11-10-2018 IPR016188 PurM-like, N-terminal domain ATC04_10695 9fb6f7d1df94baf228f6146d0ba55247 343 SUPERFAMILY SSF56042 163 320 9.24E-25 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ATC04_10695 9fb6f7d1df94baf228f6146d0ba55247 343 Gene3D G3DSA:3.30.1330.10 11 160 1.6E-38 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ATC04_11965 fef2d1e9df9c46f58b079376edb26e32 455 Gene3D G3DSA:3.65.10.10 39 264 3.1E-121 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ATC04_11965 fef2d1e9df9c46f58b079376edb26e32 455 ProSitePatterns PS00885 EPSP synthase signature 2. 358 376 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ATC04_11965 fef2d1e9df9c46f58b079376edb26e32 455 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 33 443 7.3E-105 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ATC04_11965 fef2d1e9df9c46f58b079376edb26e32 455 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 27 438 3.4E-99 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 ATC04_11965 fef2d1e9df9c46f58b079376edb26e32 455 Gene3D G3DSA:3.65.10.10 31 435 3.1E-121 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ATC04_11965 fef2d1e9df9c46f58b079376edb26e32 455 PIRSF PIRSF000505 19 448 4.0E-114 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ATC04_11965 fef2d1e9df9c46f58b079376edb26e32 455 ProSitePatterns PS00104 EPSP synthase signature 1. 108 122 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ATC04_11965 fef2d1e9df9c46f58b079376edb26e32 455 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 27 445 27.525 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ATC04_11965 fef2d1e9df9c46f58b079376edb26e32 455 SUPERFAMILY SSF55205 27 442 4.06E-95 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ATC04_09975 3717231b24a0b1095570942f07841ae5 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 236 2.8E-56 T 11-10-2018 ATC04_09975 3717231b24a0b1095570942f07841ae5 240 Gene3D G3DSA:3.40.50.720 2 240 3.9E-81 T 11-10-2018 ATC04_09975 3717231b24a0b1095570942f07841ae5 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 182 1.8E-7 T 11-10-2018 ATC04_09975 3717231b24a0b1095570942f07841ae5 240 SUPERFAMILY SSF51735 8 236 6.26E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_09975 3717231b24a0b1095570942f07841ae5 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 3.3E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09975 3717231b24a0b1095570942f07841ae5 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 3.3E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09975 3717231b24a0b1095570942f07841ae5 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 220 3.3E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09975 3717231b24a0b1095570942f07841ae5 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.3E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09975 3717231b24a0b1095570942f07841ae5 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 3.3E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09975 3717231b24a0b1095570942f07841ae5 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.3E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09975 3717231b24a0b1095570942f07841ae5 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 6.1E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09975 3717231b24a0b1095570942f07841ae5 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 6.1E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_09975 3717231b24a0b1095570942f07841ae5 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 6.1E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_18090 6f7029067e09f221cb70378792d3905d 192 Gene3D G3DSA:3.40.50.1390 3 132 2.6E-36 T 11-10-2018 ATC04_18090 6f7029067e09f221cb70378792d3905d 192 Pfam PF00239 Resolvase, N terminal domain 5 142 1.0E-36 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_18090 6f7029067e09f221cb70378792d3905d 192 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_18090 6f7029067e09f221cb70378792d3905d 192 SUPERFAMILY SSF53041 3 142 7.98E-36 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ATC04_18090 6f7029067e09f221cb70378792d3905d 192 Pfam PF02796 Helix-turn-helix domain of resolvase 147 186 1.3E-7 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 ATC04_18090 6f7029067e09f221cb70378792d3905d 192 Gene3D G3DSA:1.10.10.60 147 189 2.1E-6 T 11-10-2018 ATC04_18090 6f7029067e09f221cb70378792d3905d 192 SMART SM00857 4 144 1.3E-42 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_18090 6f7029067e09f221cb70378792d3905d 192 SUPERFAMILY SSF46689 147 188 4.26E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_13295 afe13f5ec1a35f6f1d0d96ba6b497cbd 297 SMART SM01209 105 270 0.0056 T 11-10-2018 ATC04_13295 afe13f5ec1a35f6f1d0d96ba6b497cbd 297 Gene3D G3DSA:3.30.470.20 193 285 5.9E-5 T 11-10-2018 ATC04_13295 afe13f5ec1a35f6f1d0d96ba6b497cbd 297 SUPERFAMILY SSF51735 1 75 1.46E-7 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_13295 afe13f5ec1a35f6f1d0d96ba6b497cbd 297 SUPERFAMILY SSF56059 97 270 2.3E-27 T 11-10-2018 ATC04_13295 afe13f5ec1a35f6f1d0d96ba6b497cbd 297 Pfam PF02655 ATP-grasp domain 104 270 1.2E-13 T 11-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 ATC04_13295 afe13f5ec1a35f6f1d0d96ba6b497cbd 297 Gene3D G3DSA:3.40.50.20 1 109 1.9E-9 T 11-10-2018 ATC04_13295 afe13f5ec1a35f6f1d0d96ba6b497cbd 297 Gene3D G3DSA:3.30.1490.20 110 181 4.3E-14 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ATC04_09795 e21f3f11ebb3944cb40b6cd5848eba8f 431 SUPERFAMILY SSF53901 9 286 6.86E-52 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_09795 e21f3f11ebb3944cb40b6cd5848eba8f 431 Gene3D G3DSA:3.40.47.10 1 429 1.8E-92 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_09795 e21f3f11ebb3944cb40b6cd5848eba8f 431 PIRSF PIRSF000429 3 431 1.6E-94 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_09795 e21f3f11ebb3944cb40b6cd5848eba8f 431 Pfam PF00108 Thiolase, N-terminal domain 10 279 1.5E-44 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ATC04_09795 e21f3f11ebb3944cb40b6cd5848eba8f 431 Pfam PF02803 Thiolase, C-terminal domain 288 428 1.0E-27 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ATC04_09795 e21f3f11ebb3944cb40b6cd5848eba8f 431 SUPERFAMILY SSF53901 286 428 7.16E-26 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_09795 e21f3f11ebb3944cb40b6cd5848eba8f 431 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 428 5.7E-109 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_04450 d609f9bbd3f7a7cbd8a297ccde74696e 372 PIRSF PIRSF015753 25 335 6.1E-100 T 11-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 ATC04_04450 d609f9bbd3f7a7cbd8a297ccde74696e 372 Gene3D G3DSA:3.40.30.130 2 189 5.4E-44 T 11-10-2018 ATC04_04450 d609f9bbd3f7a7cbd8a297ccde74696e 372 Pfam PF13409 Glutathione S-transferase, N-terminal domain 74 168 1.5E-10 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ATC04_04450 d609f9bbd3f7a7cbd8a297ccde74696e 372 Gene3D G3DSA:1.20.1050.10 192 366 1.6E-67 T 11-10-2018 ATC04_04450 d609f9bbd3f7a7cbd8a297ccde74696e 372 Pfam PF13410 Glutathione S-transferase, C-terminal domain 214 284 2.5E-11 T 11-10-2018 ATC04_04450 d609f9bbd3f7a7cbd8a297ccde74696e 372 SUPERFAMILY SSF47616 186 335 7.24E-33 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ATC04_03655 e194ee658881503a61554d3faa13b815 558 Pfam PF02652 L-lactate permease 15 548 2.6E-132 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ATC04_03655 e194ee658881503a61554d3faa13b815 558 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 15 548 1.4E-128 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ATC04_09550 5ff575c84ce4718355cec4b48d153cec 355 SUPERFAMILY SSF52418 84 349 1.83E-76 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_09550 5ff575c84ce4718355cec4b48d153cec 355 Gene3D G3DSA:1.20.970.10 11 76 9.0E-30 T 11-10-2018 ATC04_09550 5ff575c84ce4718355cec4b48d153cec 355 Pfam PF00591 Glycosyl transferase family, a/b domain 84 338 1.2E-76 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_09550 5ff575c84ce4718355cec4b48d153cec 355 SUPERFAMILY SSF47648 13 79 9.81E-21 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_09550 5ff575c84ce4718355cec4b48d153cec 355 Pfam PF02885 Glycosyl transferase family, helical bundle domain 16 75 3.0E-20 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_09550 5ff575c84ce4718355cec4b48d153cec 355 Gene3D G3DSA:3.40.1030.10 81 353 3.0E-94 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATC04_09550 5ff575c84ce4718355cec4b48d153cec 355 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 18 347 6.3E-105 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 ATC04_09550 5ff575c84ce4718355cec4b48d153cec 355 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 15 348 33.288 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 ATC04_15035 1c50f11eadf44b74287ac91b81a578ab 422 Gene3D G3DSA:3.20.20.370 227 402 2.3E-10 T 11-10-2018 ATC04_15035 1c50f11eadf44b74287ac91b81a578ab 422 SUPERFAMILY SSF88713 129 375 5.56E-15 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ATC04_18160 5b27a2379b1252eee7be4493e759da95 341 Pfam PF00665 Integrase core domain 128 239 1.1E-17 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_18160 5b27a2379b1252eee7be4493e759da95 341 Gene3D G3DSA:3.30.420.10 124 250 1.9E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_18160 5b27a2379b1252eee7be4493e759da95 341 SUPERFAMILY SSF53098 126 285 4.68E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_09570 e4403d7db2203605645a0b6a6fd1730b 127 Pfam PF11255 Protein of unknown function (DUF3054) 12 114 1.6E-26 T 11-10-2018 IPR021414 Protein of unknown function DUF3054 ATC04_12950 fe3173e1fc9b159207076cb17ec6ec49 535 Gene3D G3DSA:3.30.450.20 210 323 3.6E-18 T 11-10-2018 ATC04_12950 fe3173e1fc9b159207076cb17ec6ec49 535 Pfam PF17203 Single cache domain 3 48 180 2.7E-23 T 11-10-2018 IPR033463 Single cache domain 3 ATC04_12950 fe3173e1fc9b159207076cb17ec6ec49 535 Gene3D G3DSA:3.30.565.10 383 534 4.5E-23 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_12950 fe3173e1fc9b159207076cb17ec6ec49 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 494 8.4E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_12950 fe3173e1fc9b159207076cb17ec6ec49 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 8.4E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_12950 fe3173e1fc9b159207076cb17ec6ec49 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 517 8.4E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_12950 fe3173e1fc9b159207076cb17ec6ec49 535 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 329 375 1.5E-10 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain ATC04_12950 fe3173e1fc9b159207076cb17ec6ec49 535 SUPERFAMILY SSF103190 49 178 2.31E-19 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ATC04_12950 fe3173e1fc9b159207076cb17ec6ec49 535 SUPERFAMILY SSF55890 331 375 2.88E-10 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 ATC04_12950 fe3173e1fc9b159207076cb17ec6ec49 535 SUPERFAMILY SSF55874 411 533 1.3E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_12950 fe3173e1fc9b159207076cb17ec6ec49 535 SMART SM00387 427 535 2.9E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_12950 fe3173e1fc9b159207076cb17ec6ec49 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 430 534 1.6E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_12950 fe3173e1fc9b159207076cb17ec6ec49 535 Gene3D G3DSA:3.30.450.20 40 181 4.7E-15 T 11-10-2018 ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 SUPERFAMILY SSF48163 329 496 4.58E-34 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 16 332 2.6E-82 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 PRINTS PR00987 Glutamyl-tRNA synthetase signature 219 227 1.4E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 31 1.4E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 44 1.4E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 PRINTS PR00987 Glutamyl-tRNA synthetase signature 48 61 1.4E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 PRINTS PR00987 Glutamyl-tRNA synthetase signature 203 213 1.4E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 SUPERFAMILY SSF52374 16 328 1.39E-97 T 11-10-2018 ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 Gene3D G3DSA:3.40.50.620 16 257 9.7E-91 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 15 498 30.428 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 16 495 1.3E-130 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 Gene3D G3DSA:3.90.800.10 85 204 9.7E-91 T 11-10-2018 ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 Gene3D G3DSA:1.10.10.350 398 497 1.8E-23 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ATC04_10730 81a7b8163cffa9f154e3e1cbf405abb5 501 Gene3D G3DSA:1.10.1160.10 261 344 4.4E-27 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 ATC04_08570 85860f83a5b6dff502928e8a22320283 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 3.9E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_08570 85860f83a5b6dff502928e8a22320283 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 3.9E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_08570 85860f83a5b6dff502928e8a22320283 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 3.9E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_08570 85860f83a5b6dff502928e8a22320283 205 SUPERFAMILY SSF46894 133 205 8.5E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_08570 85860f83a5b6dff502928e8a22320283 205 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_08570 85860f83a5b6dff502928e8a22320283 205 Gene3D G3DSA:3.40.50.12740 2 205 2.7E-62 T 11-10-2018 ATC04_08570 85860f83a5b6dff502928e8a22320283 205 SMART SM00448 2 116 7.1E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_08570 85860f83a5b6dff502928e8a22320283 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 199 2.3E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_08570 85860f83a5b6dff502928e8a22320283 205 SUPERFAMILY SSF52172 2 133 1.85E-29 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_08570 85860f83a5b6dff502928e8a22320283 205 Pfam PF00072 Response regulator receiver domain 4 116 1.5E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_08570 85860f83a5b6dff502928e8a22320283 205 SMART SM00421 142 199 1.2E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 Gene3D G3DSA:1.10.150.310 528 652 2.0E-42 T 11-10-2018 ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 Gene3D G3DSA:1.10.3500.10 135 527 9.5E-140 T 11-10-2018 IPR023323 Tex-like domain superfamily ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 Pfam PF12836 Helix-hairpin-helix motif 520 584 9.0E-28 T 11-10-2018 ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 Pfam PF16921 Tex protein YqgF-like domain 354 480 7.9E-50 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 SUPERFAMILY SSF47781 499 586 1.22E-26 T 11-10-2018 IPR010994 RuvA domain 2-like ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 SUPERFAMILY SSF50249 660 748 9.7E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 Gene3D G3DSA:1.10.10.650 18 132 2.2E-36 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 Pfam PF00575 S1 RNA binding domain 671 742 2.4E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 SMART SM00732 354 453 7.7E-31 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 SUPERFAMILY SSF158832 22 349 6.28E-93 T 11-10-2018 ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 SUPERFAMILY SSF47781 589 654 4.0E-12 T 11-10-2018 IPR010994 RuvA domain 2-like ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 Gene3D G3DSA:2.40.50.140 653 745 6.0E-27 T 11-10-2018 ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 Gene3D G3DSA:3.30.420.140 353 480 9.5E-140 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 Pfam PF09371 Tex-like protein N-terminal domain 35 213 8.3E-61 T 11-10-2018 IPR018974 Tex-like protein, N-terminal ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 SUPERFAMILY SSF53098 350 498 6.22E-48 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_04285 7625b9db52d1e456cf1f6477c8b5dec9 810 SMART SM00316 671 742 9.3E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 ATC04_03545 995dd73444fa6ac9d393e5bf84c16532 147 Pfam PF03061 Thioesterase superfamily 51 126 2.5E-9 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ATC04_03545 995dd73444fa6ac9d393e5bf84c16532 147 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 124 4.6E-15 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 ATC04_03545 995dd73444fa6ac9d393e5bf84c16532 147 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 106 - T 11-10-2018 IPR010916 TonB box, conserved site ATC04_03545 995dd73444fa6ac9d393e5bf84c16532 147 Gene3D G3DSA:3.10.129.10 5 147 2.6E-37 T 11-10-2018 ATC04_03545 995dd73444fa6ac9d393e5bf84c16532 147 SUPERFAMILY SSF54637 11 126 1.4E-22 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_16510 26e3fed003f041d8ea4f134c69aa19fa 376 Gene3D G3DSA:3.40.1350.30 56 210 3.7E-71 T 11-10-2018 ATC04_16510 26e3fed003f041d8ea4f134c69aa19fa 376 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 306 337 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site ATC04_16510 26e3fed003f041d8ea4f134c69aa19fa 376 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 206 373 5.9E-10 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 ATC04_16510 26e3fed003f041d8ea4f134c69aa19fa 376 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 356 366 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site ATC04_16510 26e3fed003f041d8ea4f134c69aa19fa 376 SUPERFAMILY SSF53335 3 373 6.02E-55 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_16510 26e3fed003f041d8ea4f134c69aa19fa 376 Gene3D G3DSA:3.40.50.150 14 368 3.7E-71 T 11-10-2018 ATC04_12180 c7c1687ae63842ccb51a4821d0da8c3f 463 SUPERFAMILY SSF51569 19 458 7.18E-190 T 11-10-2018 ATC04_12180 c7c1687ae63842ccb51a4821d0da8c3f 463 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 23 459 2.3E-203 T 11-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ATC04_12180 c7c1687ae63842ccb51a4821d0da8c3f 463 Pfam PF01474 Class-II DAHP synthetase family 24 454 1.9E-193 T 11-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ATC04_16855 d7e3991da4bc98dab44e0d64eb9dfc6c 193 SUPERFAMILY SSF46689 8 84 5.13E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_16855 d7e3991da4bc98dab44e0d64eb9dfc6c 193 SUPERFAMILY SSF48498 86 186 3.95E-10 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_16855 d7e3991da4bc98dab44e0d64eb9dfc6c 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.5E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_16855 d7e3991da4bc98dab44e0d64eb9dfc6c 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 3.5E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_16855 d7e3991da4bc98dab44e0d64eb9dfc6c 193 Gene3D G3DSA:1.10.357.10 5 192 1.1E-52 T 11-10-2018 ATC04_16855 d7e3991da4bc98dab44e0d64eb9dfc6c 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 4.0E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_11005 ca2849dfd3a37f5f73b9e0a1ce7c0892 477 Gene3D G3DSA:3.90.25.10 343 441 3.9E-72 T 11-10-2018 ATC04_11005 ca2849dfd3a37f5f73b9e0a1ce7c0892 477 Gene3D G3DSA:3.40.50.720 191 456 3.9E-72 T 11-10-2018 ATC04_11005 ca2849dfd3a37f5f73b9e0a1ce7c0892 477 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 12 184 3.0E-64 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ATC04_11005 ca2849dfd3a37f5f73b9e0a1ce7c0892 477 SUPERFAMILY SSF51182 8 184 3.31E-53 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ATC04_11005 ca2849dfd3a37f5f73b9e0a1ce7c0892 477 Pfam PF04321 RmlD substrate binding domain 189 467 2.6E-70 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 ATC04_11005 ca2849dfd3a37f5f73b9e0a1ce7c0892 477 SUPERFAMILY SSF51735 189 466 8.52E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_11005 ca2849dfd3a37f5f73b9e0a1ce7c0892 477 Gene3D G3DSA:2.60.120.10 2 190 1.6E-53 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_11005 ca2849dfd3a37f5f73b9e0a1ce7c0892 477 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 12 180 1.4E-40 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ATC04_18485 fb5eb9a7acfe7752d5bf1786ada99571 340 SUPERFAMILY SSF52540 72 223 5.72E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_18485 fb5eb9a7acfe7752d5bf1786ada99571 340 Gene3D G3DSA:3.40.50.300 47 309 1.1E-43 T 11-10-2018 ATC04_18485 fb5eb9a7acfe7752d5bf1786ada99571 340 Pfam PF06414 Zeta toxin 72 113 4.1E-6 T 11-10-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 ATC04_18485 fb5eb9a7acfe7752d5bf1786ada99571 340 Pfam PF06414 Zeta toxin 146 251 2.6E-13 T 11-10-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 ATC04_00375 80b396491c33164b1b14fcf43a1760c8 121 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 78 8.1E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_00375 80b396491c33164b1b14fcf43a1760c8 121 SMART SM00345 19 78 7.0E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_00375 80b396491c33164b1b14fcf43a1760c8 121 SUPERFAMILY SSF46785 8 97 3.38E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_00375 80b396491c33164b1b14fcf43a1760c8 121 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 4.2E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_00375 80b396491c33164b1b14fcf43a1760c8 121 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 4.2E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_00375 80b396491c33164b1b14fcf43a1760c8 121 Gene3D G3DSA:1.10.10.10 12 121 1.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_02150 1afdaf46816c9845f9a25b260619a885 271 Pfam PF01614 Bacterial transcriptional regulator 127 228 9.1E-25 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ATC04_02150 1afdaf46816c9845f9a25b260619a885 271 Gene3D G3DSA:1.10.10.10 8 79 6.5E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_02150 1afdaf46816c9845f9a25b260619a885 271 Pfam PF09339 IclR helix-turn-helix domain 14 62 8.1E-12 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_02150 1afdaf46816c9845f9a25b260619a885 271 SMART SM00346 12 97 1.5E-10 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_02150 1afdaf46816c9845f9a25b260619a885 271 SUPERFAMILY SSF46785 13 80 8.24E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_02150 1afdaf46816c9845f9a25b260619a885 271 Gene3D G3DSA:3.30.450.40 84 253 1.3E-46 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_02150 1afdaf46816c9845f9a25b260619a885 271 SUPERFAMILY SSF55781 69 247 1.9E-41 T 11-10-2018 ATC04_05110 5dff4418c5d5e3d69f528f5a28e076f3 396 Pfam PF02674 Colicin V production protein 8 149 1.8E-14 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 ATC04_05110 5dff4418c5d5e3d69f528f5a28e076f3 396 SUPERFAMILY SSF50494 207 378 2.38E-36 T 11-10-2018 IPR009003 Peptidase S1, PA clan ATC04_05110 5dff4418c5d5e3d69f528f5a28e076f3 396 Gene3D G3DSA:2.40.10.10 188 276 3.7E-17 T 11-10-2018 ATC04_05110 5dff4418c5d5e3d69f528f5a28e076f3 396 Pfam PF13365 Trypsin-like peptidase domain 217 354 5.6E-25 T 11-10-2018 ATC04_05110 5dff4418c5d5e3d69f528f5a28e076f3 396 Gene3D G3DSA:2.40.10.10 278 381 2.3E-20 T 11-10-2018 ATC04_05110 5dff4418c5d5e3d69f528f5a28e076f3 396 PRINTS PR00834 HtrA/DegQ protease family signature 325 342 1.2E-9 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATC04_05110 5dff4418c5d5e3d69f528f5a28e076f3 396 PRINTS PR00834 HtrA/DegQ protease family signature 285 309 1.2E-9 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATC04_05110 5dff4418c5d5e3d69f528f5a28e076f3 396 PRINTS PR00834 HtrA/DegQ protease family signature 246 266 1.2E-9 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATC04_05110 5dff4418c5d5e3d69f528f5a28e076f3 396 PRINTS PR00834 HtrA/DegQ protease family signature 225 237 1.2E-9 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATC04_04200 957c1ddbc04d7abad1e1ea95d55d3311 599 PIRSF PIRSF006429 9 535 1.4E-158 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein ATC04_04200 957c1ddbc04d7abad1e1ea95d55d3311 599 Pfam PF01645 Conserved region in glutamate synthase 148 474 6.8E-87 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 ATC04_04200 957c1ddbc04d7abad1e1ea95d55d3311 599 SUPERFAMILY SSF51395 22 505 1.41E-125 T 11-10-2018 ATC04_04200 957c1ddbc04d7abad1e1ea95d55d3311 599 PIRSF PIRSF500060 9 529 5.5E-212 T 11-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria ATC04_04200 957c1ddbc04d7abad1e1ea95d55d3311 599 Gene3D G3DSA:3.20.20.70 138 505 2.3E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 SMART SM00958 228 340 4.1E-61 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 831 19.478 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 SUPERFAMILY SSF52540 399 613 6.97E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 Pfam PF07517 SecA DEAD-like domain 6 383 4.0E-127 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 SUPERFAMILY SSF81767 231 350 2.22E-42 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 SUPERFAMILY SSF81886 617 836 3.66E-66 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 27 817 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 Pfam PF01043 SecA preprotein cross-linking domain 234 340 1.4E-36 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 Gene3D G3DSA:3.40.50.300 399 616 1.5E-87 T 11-10-2018 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 Pfam PF07516 SecA Wing and Scaffold domain 615 828 1.9E-61 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 ProSitePatterns PS01312 SecA family signature. 482 497 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 PRINTS PR00906 SecA protein signature 116 126 5.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 PRINTS PR00906 SecA protein signature 358 375 5.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 PRINTS PR00906 SecA protein signature 100 114 5.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 PRINTS PR00906 SecA protein signature 62 86 5.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 PRINTS PR00906 SecA protein signature 395 408 5.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 PRINTS PR00906 SecA protein signature 321 343 5.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 PRINTS PR00906 SecA protein signature 169 189 5.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 Gene3D G3DSA:3.40.50.300 21 397 2.4E-176 T 11-10-2018 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 Gene3D G3DSA:3.90.1440.10 228 350 2.4E-176 T 11-10-2018 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 Gene3D G3DSA:1.10.3060.10 618 831 1.2E-70 T 11-10-2018 ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 SUPERFAMILY SSF52540 5 397 9.11E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_07235 62c5486527110d41e60d6bd8e551ac62 889 SMART SM00957 5 384 7.4E-272 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ATC04_00460 083c0e8956cae33cf629814d448749de 299 SUPERFAMILY SSF53613 4 298 3.59E-52 T 11-10-2018 IPR029056 Ribokinase-like ATC04_00460 083c0e8956cae33cf629814d448749de 299 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 233 246 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ATC04_00460 083c0e8956cae33cf629814d448749de 299 Pfam PF00294 pfkB family carbohydrate kinase 23 294 3.0E-33 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ATC04_00460 083c0e8956cae33cf629814d448749de 299 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 26 50 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ATC04_00460 083c0e8956cae33cf629814d448749de 299 Gene3D G3DSA:3.40.1190.20 4 299 1.8E-61 T 11-10-2018 IPR029056 Ribokinase-like ATC04_07980 29098f2e569e5153aa9cc61fa9dc1788 161 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 42 154 9.0E-29 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 ATC04_07980 29098f2e569e5153aa9cc61fa9dc1788 161 Pfam PF03061 Thioesterase superfamily 71 147 2.8E-15 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ATC04_07980 29098f2e569e5153aa9cc61fa9dc1788 161 SUPERFAMILY SSF54637 41 159 2.13E-27 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_07980 29098f2e569e5153aa9cc61fa9dc1788 161 Gene3D G3DSA:3.10.129.10 29 160 2.1E-42 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 SUPERFAMILY SSF81665 143 704 1.31E-15 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 Gene3D G3DSA:3.40.50.1000 385 655 1.5E-90 T 11-10-2018 IPR023214 HAD superfamily ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 178 693 8.8E-88 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 PRINTS PR00943 Copper-transporting ATPase signature 198 216 2.3E-11 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 PRINTS PR00943 Copper-transporting ATPase signature 638 652 2.3E-11 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 PRINTS PR00943 Copper-transporting ATPase signature 387 402 2.3E-11 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 PRINTS PR00943 Copper-transporting ATPase signature 581 598 2.3E-11 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 PRINTS PR00943 Copper-transporting ATPase signature 677 691 2.3E-11 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 PRINTS PR00943 Copper-transporting ATPase signature 127 146 2.3E-11 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 PRINTS PR00943 Copper-transporting ATPase signature 328 342 2.3E-11 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 255 269 1.4E-26 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 604 623 1.4E-26 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 627 639 1.4E-26 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 561 1.4E-26 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 404 418 1.4E-26 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 540 1.4E-26 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 124 713 9.8E-173 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 Gene3D G3DSA:2.70.150.20 199 310 1.6E-33 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 Pfam PF00122 E1-E2 ATPase 205 383 1.5E-47 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 Pfam PF00702 haloacid dehalogenase-like hydrolase 400 617 1.8E-42 T 11-10-2018 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 142 711 4.6E-173 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 Gene3D G3DSA:3.40.1110.10 415 536 1.5E-90 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 406 412 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 SUPERFAMILY SSF81653 209 305 1.2E-22 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ATC04_14760 094df16ce6b24e84b0ccab742d1944ab 723 SUPERFAMILY SSF56784 402 709 4.56E-53 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_01820 e21b4d855520827172a8e307314cd7c9 277 PRINTS PR00412 Epoxide hydrolase signature 252 274 1.3E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_01820 e21b4d855520827172a8e307314cd7c9 277 PRINTS PR00412 Epoxide hydrolase signature 218 234 1.3E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_01820 e21b4d855520827172a8e307314cd7c9 277 PRINTS PR00412 Epoxide hydrolase signature 31 49 1.3E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_01820 e21b4d855520827172a8e307314cd7c9 277 PRINTS PR00412 Epoxide hydrolase signature 51 66 1.3E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_01820 e21b4d855520827172a8e307314cd7c9 277 SUPERFAMILY SSF53474 10 277 4.99E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_01820 e21b4d855520827172a8e307314cd7c9 277 Gene3D G3DSA:3.40.50.1820 3 276 2.1E-80 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_01820 e21b4d855520827172a8e307314cd7c9 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 220 234 3.8E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_01820 e21b4d855520827172a8e307314cd7c9 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 3.8E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_01820 e21b4d855520827172a8e307314cd7c9 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 3.8E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_01820 e21b4d855520827172a8e307314cd7c9 277 Pfam PF00561 alpha/beta hydrolase fold 26 263 3.2E-28 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_00140 3082373e1933cd56c790aa0e53ac553c 519 SUPERFAMILY SSF55681 178 516 1.15E-98 T 11-10-2018 ATC04_00140 3082373e1933cd56c790aa0e53ac553c 519 SUPERFAMILY SSF50249 27 171 2.15E-34 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_00140 3082373e1933cd56c790aa0e53ac553c 519 PRINTS PR00982 Lysyl-tRNA synthetase signature 278 295 1.5E-31 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_00140 3082373e1933cd56c790aa0e53ac553c 519 PRINTS PR00982 Lysyl-tRNA synthetase signature 231 247 1.5E-31 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_00140 3082373e1933cd56c790aa0e53ac553c 519 PRINTS PR00982 Lysyl-tRNA synthetase signature 260 273 1.5E-31 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_00140 3082373e1933cd56c790aa0e53ac553c 519 PRINTS PR00982 Lysyl-tRNA synthetase signature 401 417 1.5E-31 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_00140 3082373e1933cd56c790aa0e53ac553c 519 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 225 1.5E-31 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_00140 3082373e1933cd56c790aa0e53ac553c 519 Pfam PF01336 OB-fold nucleic acid binding domain 82 161 5.4E-8 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ATC04_00140 3082373e1933cd56c790aa0e53ac553c 519 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 28 518 5.3E-146 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_00140 3082373e1933cd56c790aa0e53ac553c 519 Gene3D G3DSA:2.40.50.140 26 172 1.8E-40 T 11-10-2018 ATC04_00140 3082373e1933cd56c790aa0e53ac553c 519 Pfam PF00152 tRNA synthetases class II (D, K and N) 178 515 4.7E-63 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_00140 3082373e1933cd56c790aa0e53ac553c 519 Gene3D G3DSA:3.30.930.10 177 519 3.2E-104 T 11-10-2018 ATC04_00140 3082373e1933cd56c790aa0e53ac553c 519 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 34 518 34.837 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 SUPERFAMILY SSF100920 360 516 7.32E-62 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 SUPERFAMILY SSF100934 483 582 2.09E-11 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 SUPERFAMILY SSF53067 1 159 6.62E-57 T 11-10-2018 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 Gene3D G3DSA:1.20.1270.10 483 584 7.2E-26 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 Gene3D G3DSA:3.30.420.40 162 341 7.4E-136 T 11-10-2018 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 Pfam PF00012 Hsp70 protein 4 78 1.3E-28 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 Pfam PF00012 Hsp70 protein 79 580 1.3E-202 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 610 34.705 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 SUPERFAMILY SSF53067 163 358 7.92E-58 T 11-10-2018 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 313 327 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 Gene3D G3DSA:2.60.34.10 353 480 3.5E-58 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 PRINTS PR00301 70kDa heat shock protein signature 341 361 5.7E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.7E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 PRINTS PR00301 70kDa heat shock protein signature 54 62 5.7E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 PRINTS PR00301 70kDa heat shock protein signature 445 461 5.7E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.7E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 PRINTS PR00301 70kDa heat shock protein signature 310 326 5.7E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 PRINTS PR00301 70kDa heat shock protein signature 174 184 5.7E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 PRINTS PR00301 70kDa heat shock protein signature 114 134 5.7E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 PRINTS PR00301 70kDa heat shock protein signature 364 383 5.7E-74 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 Gene3D G3DSA:3.90.640.10 205 291 7.4E-136 T 11-10-2018 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 Gene3D G3DSA:3.30.420.40 5 352 7.4E-136 T 11-10-2018 ATC04_04960 b1a28f3b7c88d5056219baffef2ca3d3 616 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 4 580 7.0E-266 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 ATC04_06115 b61a88dce43b1a3c5c3fd75883ffc7e0 100 Gene3D G3DSA:3.30.70.330 7 97 7.6E-31 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ATC04_06115 b61a88dce43b1a3c5c3fd75883ffc7e0 100 Pfam PF00276 Ribosomal protein L23 10 91 2.0E-30 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ATC04_06115 b61a88dce43b1a3c5c3fd75883ffc7e0 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 9 97 21.155 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ATC04_06115 b61a88dce43b1a3c5c3fd75883ffc7e0 100 SUPERFAMILY SSF54189 8 93 6.47E-30 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_18005 8b7c989018a2a91b7392c44e30acf045 103 Pfam PF01527 Transposase 2 77 6.2E-8 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATC04_18005 8b7c989018a2a91b7392c44e30acf045 103 Gene3D G3DSA:1.10.10.10 1 64 2.8E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_18005 8b7c989018a2a91b7392c44e30acf045 103 SUPERFAMILY SSF46689 1 97 4.03E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 708 722 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1065 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 SUPERFAMILY SSF52440 552 673 8.06E-46 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 SUPERFAMILY SSF52335 949 1081 8.63E-33 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.9E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 4.9E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 4.9E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 4.9E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.9E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 4.9E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 4.9E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 Gene3D G3DSA:1.10.1030.10 403 548 2.4E-41 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1075 12.809 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 Gene3D G3DSA:3.30.470.20 119 402 5.4E-120 T 11-10-2018 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 Pfam PF02142 MGS-like domain 969 1054 1.2E-16 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 SUPERFAMILY SSF56059 128 400 1.31E-103 T 11-10-2018 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 Gene3D G3DSA:3.40.50.20 1 116 1.1E-47 T 11-10-2018 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 837 844 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 SUPERFAMILY SSF52440 1 127 1.87E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 542 9.6E-38 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 Gene3D G3DSA:3.30.470.20 664 948 1.7E-102 T 11-10-2018 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 SMART SM01096 421 542 2.2E-59 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 Gene3D G3DSA:3.40.50.20 549 661 1.4E-47 T 11-10-2018 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 SMART SM00851 968 1054 5.6E-25 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 Gene3D G3DSA:3.40.50.1380 949 1087 2.1E-36 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 SUPERFAMILY SSF56059 673 946 1.94E-92 T 11-10-2018 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 694 874 1.2E-34 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 3.4E-66 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_09280 55022a504a1d48ba7c608a48547782b4 1092 SUPERFAMILY SSF48108 395 548 1.2E-45 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_01255 b382736cc1db9805ab5ebae0d30c61f2 226 Pfam PF00378 Enoyl-CoA hydratase/isomerase 29 216 2.2E-32 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ATC04_01255 b382736cc1db9805ab5ebae0d30c61f2 226 Gene3D G3DSA:3.90.226.10 7 220 2.8E-55 T 11-10-2018 ATC04_01255 b382736cc1db9805ab5ebae0d30c61f2 226 SUPERFAMILY SSF52096 16 218 2.73E-45 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_03475 9e3f24744a124caf3a3d2d91b9c0f5c6 125 Pfam PF02656 Domain of unknown function (DUF202) 23 89 2.3E-17 T 11-10-2018 IPR003807 Domain of unknown function DUF202 ATC04_08540 a5b3b776404ed780441a22060476f127 259 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 207 4.8E-43 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ATC04_08540 a5b3b776404ed780441a22060476f127 259 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 232 3.3E-78 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ATC04_08540 a5b3b776404ed780441a22060476f127 259 Gene3D G3DSA:3.40.1010.10 2 119 8.6E-37 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ATC04_08540 a5b3b776404ed780441a22060476f127 259 Gene3D G3DSA:3.30.950.10 120 242 8.9E-37 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 ATC04_08540 a5b3b776404ed780441a22060476f127 259 SUPERFAMILY SSF53790 2 235 1.7E-67 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ATC04_11220 bd3498fc9f7ca9f5eeb8c898d4c982ab 86 TIGRFAM TIGR00202 csrA: carbon storage regulator 2 63 1.4E-22 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ATC04_11220 bd3498fc9f7ca9f5eeb8c898d4c982ab 86 Pfam PF02599 Global regulator protein family 2 51 1.5E-19 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ATC04_11220 bd3498fc9f7ca9f5eeb8c898d4c982ab 86 SUPERFAMILY SSF117130 2 55 8.24E-17 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 ATC04_11220 bd3498fc9f7ca9f5eeb8c898d4c982ab 86 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 72 15.923 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ATC04_11220 bd3498fc9f7ca9f5eeb8c898d4c982ab 86 Gene3D G3DSA:3.30.70.1680 1 62 2.0E-22 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 ATC04_11220 bd3498fc9f7ca9f5eeb8c898d4c982ab 86 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 46 7.0E-11 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ATC04_04195 87ab11c75bbd6acd1d61559c2d805501 592 Gene3D G3DSA:1.20.1560.10 3 334 1.2E-25 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_04195 87ab11c75bbd6acd1d61559c2d805501 592 Pfam PF00005 ABC transporter 364 512 3.6E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_04195 87ab11c75bbd6acd1d61559c2d805501 592 SUPERFAMILY SSF52540 338 577 1.87E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_04195 87ab11c75bbd6acd1d61559c2d805501 592 Gene3D G3DSA:3.40.50.300 335 585 2.9E-74 T 11-10-2018 ATC04_04195 87ab11c75bbd6acd1d61559c2d805501 592 SMART SM00382 373 559 5.5E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04195 87ab11c75bbd6acd1d61559c2d805501 592 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_04195 87ab11c75bbd6acd1d61559c2d805501 592 Pfam PF00664 ABC transporter transmembrane region 70 302 1.9E-13 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ATC04_04195 87ab11c75bbd6acd1d61559c2d805501 592 SUPERFAMILY SSF90123 20 336 1.06E-31 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_01435 b1e801ca0defdd03d0f1cb7ff2da6c9d 328 Gene3D G3DSA:1.20.140.10 181 320 1.6E-28 T 11-10-2018 ATC04_01435 b1e801ca0defdd03d0f1cb7ff2da6c9d 328 SUPERFAMILY SSF47203 180 317 1.61E-29 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_01435 b1e801ca0defdd03d0f1cb7ff2da6c9d 328 Gene3D G3DSA:1.10.540.10 2 109 4.7E-19 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_01435 b1e801ca0defdd03d0f1cb7ff2da6c9d 328 SUPERFAMILY SSF56645 1 91 6.28E-13 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_01435 b1e801ca0defdd03d0f1cb7ff2da6c9d 328 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 85 1.0E-10 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_01435 b1e801ca0defdd03d0f1cb7ff2da6c9d 328 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 184 317 5.7E-23 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_00850 e46445394d2463ead7de0806bc5b9f19 89 Pfam PF03779 SPW repeat 28 73 1.5E-6 T 11-10-2018 IPR005530 SPW repeat ATC04_07315 556c95904676071f48d1adab800f01a6 592 Gene3D G3DSA:3.90.1310.30 37 234 9.1E-39 T 11-10-2018 ATC04_07315 556c95904676071f48d1adab800f01a6 592 SUPERFAMILY SSF56601 184 577 3.5E-73 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ATC04_07315 556c95904676071f48d1adab800f01a6 592 Gene3D G3DSA:3.40.710.10 295 486 1.5E-84 T 11-10-2018 ATC04_07315 556c95904676071f48d1adab800f01a6 592 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 561 6.9E-54 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ATC04_07315 556c95904676071f48d1adab800f01a6 592 Gene3D G3DSA:3.30.450.330 235 565 1.5E-84 T 11-10-2018 ATC04_07315 556c95904676071f48d1adab800f01a6 592 Pfam PF03717 Penicillin-binding Protein dimerisation domain 44 216 1.4E-20 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ATC04_07315 556c95904676071f48d1adab800f01a6 592 SUPERFAMILY SSF56519 40 233 6.54E-38 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ATC04_12845 892ab53bee339500c1f5054f89eb3edf 163 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 122 141 1.3E-35 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ATC04_12845 892ab53bee339500c1f5054f89eb3edf 163 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 10 28 1.3E-35 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ATC04_12845 892ab53bee339500c1f5054f89eb3edf 163 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 54 72 1.3E-35 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ATC04_12845 892ab53bee339500c1f5054f89eb3edf 163 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 78 96 1.3E-35 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ATC04_12845 892ab53bee339500c1f5054f89eb3edf 163 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 33 51 1.3E-35 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ATC04_12845 892ab53bee339500c1f5054f89eb3edf 163 SUPERFAMILY SSF63411 9 160 7.42E-59 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ATC04_12845 892ab53bee339500c1f5054f89eb3edf 163 Gene3D G3DSA:3.30.1360.80 14 162 1.0E-56 T 11-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ATC04_12845 892ab53bee339500c1f5054f89eb3edf 163 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 8 153 8.2E-52 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ATC04_12845 892ab53bee339500c1f5054f89eb3edf 163 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 14 155 2.0E-56 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ATC04_12845 892ab53bee339500c1f5054f89eb3edf 163 PIRSF PIRSF006160 6 162 1.4E-60 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ATC04_12845 892ab53bee339500c1f5054f89eb3edf 163 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 6 160 35.655 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 Gene3D G3DSA:1.10.287.110 7 118 1.2E-32 T 11-10-2018 IPR036869 Chaperone J-domain superfamily ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 SUPERFAMILY SSF46565 9 113 3.79E-30 T 11-10-2018 IPR036869 Chaperone J-domain superfamily ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 PRINTS PR00625 DnaJ domain signature 30 45 5.0E-22 T 11-10-2018 IPR001623 DnaJ domain ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 PRINTS PR00625 DnaJ domain signature 47 67 5.0E-22 T 11-10-2018 IPR001623 DnaJ domain ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 PRINTS PR00625 DnaJ domain signature 12 30 5.0E-22 T 11-10-2018 IPR001623 DnaJ domain ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 PRINTS PR00625 DnaJ domain signature 67 86 5.0E-22 T 11-10-2018 IPR001623 DnaJ domain ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 Gene3D G3DSA:2.60.260.20 141 211 1.0E-14 T 11-10-2018 ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 ProSitePatterns PS00636 Nt-dnaJ domain signature. 52 71 - T 11-10-2018 IPR018253 DnaJ domain, conserved site ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 SUPERFAMILY SSF49493 141 220 3.14E-15 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 Pfam PF01556 DnaJ C terminal domain 151 289 4.4E-31 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 Pfam PF00226 DnaJ domain 10 72 1.2E-26 T 11-10-2018 IPR001623 DnaJ domain ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 Gene3D G3DSA:2.60.260.20 212 289 2.3E-27 T 11-10-2018 ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 SMART SM00271 9 67 1.4E-28 T 11-10-2018 IPR001623 DnaJ domain ATC04_04970 e0a7ba38bc94cd467340eb115c001693 322 SUPERFAMILY SSF49493 215 299 5.62E-21 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ATC04_16940 3d1ac0dc6a91c058ccb666d269dd1b8f 222 Gene3D G3DSA:1.10.10.10 125 222 1.4E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16940 3d1ac0dc6a91c058ccb666d269dd1b8f 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 218 3.1E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_16940 3d1ac0dc6a91c058ccb666d269dd1b8f 222 Gene3D G3DSA:3.40.50.2300 1 123 2.9E-36 T 11-10-2018 ATC04_16940 3d1ac0dc6a91c058ccb666d269dd1b8f 222 SMART SM00448 2 113 9.3E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_16940 3d1ac0dc6a91c058ccb666d269dd1b8f 222 SMART SM00862 147 218 1.8E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_16940 3d1ac0dc6a91c058ccb666d269dd1b8f 222 Pfam PF00072 Response regulator receiver domain 4 114 1.9E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_16940 3d1ac0dc6a91c058ccb666d269dd1b8f 222 SUPERFAMILY SSF52172 4 177 5.3E-36 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_16040 557bbc5895d80759937df1e703e0ee8f 223 Pfam PF01144 Coenzyme A transferase 7 218 4.2E-69 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_16040 557bbc5895d80759937df1e703e0ee8f 223 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 4 220 1.7E-108 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 ATC04_16040 557bbc5895d80759937df1e703e0ee8f 223 SMART SM00882 6 219 3.9E-79 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_16040 557bbc5895d80759937df1e703e0ee8f 223 SUPERFAMILY SSF100950 5 219 6.21E-79 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_16040 557bbc5895d80759937df1e703e0ee8f 223 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 ATC04_16040 557bbc5895d80759937df1e703e0ee8f 223 Gene3D G3DSA:3.40.1080.10 1 218 1.7E-81 T 11-10-2018 ATC04_01945 c329b0f765b339f3968f27d29c0a1a1e 198 Gene3D G3DSA:3.40.630.30 2 197 2.7E-41 T 11-10-2018 ATC04_01945 c329b0f765b339f3968f27d29c0a1a1e 198 Pfam PF13302 Acetyltransferase (GNAT) domain 16 163 1.0E-27 T 11-10-2018 IPR000182 GNAT domain ATC04_01945 c329b0f765b339f3968f27d29c0a1a1e 198 SUPERFAMILY SSF55729 11 188 3.73E-35 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_02715 8b351f93730fa0c147441ee4c676cdfd 409 SUPERFAMILY SSF51395 38 402 1.31E-97 T 11-10-2018 ATC04_02715 8b351f93730fa0c147441ee4c676cdfd 409 PIRSF PIRSF000138 17 407 1.3E-130 T 11-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 ATC04_02715 8b351f93730fa0c147441ee4c676cdfd 409 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 300 306 - T 11-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 ATC04_02715 8b351f93730fa0c147441ee4c676cdfd 409 Gene3D G3DSA:3.20.20.70 36 408 1.1E-129 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_02715 8b351f93730fa0c147441ee4c676cdfd 409 Pfam PF01070 FMN-dependent dehydrogenase 45 403 7.9E-128 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 ATC04_05215 0f833fa9a47ca3d4413b87b083e07785 338 Pfam PF02541 Ppx/GppA phosphatase family 30 302 1.6E-62 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 ATC04_05215 0f833fa9a47ca3d4413b87b083e07785 338 Gene3D G3DSA:3.30.420.150 108 293 1.4E-67 T 11-10-2018 ATC04_05215 0f833fa9a47ca3d4413b87b083e07785 338 SUPERFAMILY SSF53067 2 125 6.04E-27 T 11-10-2018 ATC04_05215 0f833fa9a47ca3d4413b87b083e07785 338 Gene3D G3DSA:3.30.420.40 5 300 1.4E-67 T 11-10-2018 ATC04_05215 0f833fa9a47ca3d4413b87b083e07785 338 SUPERFAMILY SSF53067 129 306 2.01E-32 T 11-10-2018 ATC04_09640 f2d383df3494295f70669a7cd114a64b 288 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 25 237 1.0E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATC04_09640 f2d383df3494295f70669a7cd114a64b 288 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 13 251 14.29 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATC04_09640 f2d383df3494295f70669a7cd114a64b 288 Pfam PF00902 Sec-independent protein translocase protein (TatC) 27 234 5.4E-53 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATC04_09640 f2d383df3494295f70669a7cd114a64b 288 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 116 142 1.5E-33 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATC04_09640 f2d383df3494295f70669a7cd114a64b 288 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 166 194 1.5E-33 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATC04_09640 f2d383df3494295f70669a7cd114a64b 288 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 98 116 1.5E-33 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATC04_09640 f2d383df3494295f70669a7cd114a64b 288 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 24 51 1.5E-33 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATC04_08685 6e3134412da2479b5c42fbbdc743e75f 125 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 12 109 2.5E-28 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ATC04_08685 6e3134412da2479b5c42fbbdc743e75f 125 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 5 110 21.48 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ATC04_08685 6e3134412da2479b5c42fbbdc743e75f 125 SUPERFAMILY SSF81301 6 118 2.62E-33 T 11-10-2018 ATC04_08685 6e3134412da2479b5c42fbbdc743e75f 125 Gene3D G3DSA:3.30.460.10 1 113 1.1E-34 T 11-10-2018 ATC04_08685 6e3134412da2479b5c42fbbdc743e75f 125 Pfam PF02410 Ribosomal silencing factor during starvation 16 109 1.3E-20 T 11-10-2018 ATC04_10745 ec6844457074add6ff41aa962c26e6ad 364 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 50 362 4.4E-133 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 ATC04_10745 ec6844457074add6ff41aa962c26e6ad 364 ProSitePatterns PS00770 Aminotransferases class-IV signature. 239 269 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 ATC04_10745 ec6844457074add6ff41aa962c26e6ad 364 Gene3D G3DSA:3.20.10.10 177 346 6.8E-128 T 11-10-2018 ATC04_10745 ec6844457074add6ff41aa962c26e6ad 364 SUPERFAMILY SSF56752 9 360 7.33E-108 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 ATC04_10745 ec6844457074add6ff41aa962c26e6ad 364 Pfam PF01063 Amino-transferase class IV 76 317 1.3E-35 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 ATC04_10745 ec6844457074add6ff41aa962c26e6ad 364 PIRSF PIRSF006468 1 364 1.3E-127 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 ATC04_10745 ec6844457074add6ff41aa962c26e6ad 364 Gene3D G3DSA:3.30.470.10 26 359 6.8E-128 T 11-10-2018 ATC04_18120 951bba692770333fe0a63cd3cee7ec80 907 Gene3D G3DSA:3.40.50.150 280 598 3.4E-31 T 11-10-2018 ATC04_18120 951bba692770333fe0a63cd3cee7ec80 907 Pfam PF02384 N-6 DNA Methylase 339 528 3.5E-5 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 ATC04_18120 951bba692770333fe0a63cd3cee7ec80 907 SUPERFAMILY SSF53335 159 591 1.58E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_05420 53246b432196cc4bfa0db2e0b1e43372 337 SUPERFAMILY SSF55729 5 117 3.54E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_05420 53246b432196cc4bfa0db2e0b1e43372 337 SUPERFAMILY SSF81301 167 334 8.5E-38 T 11-10-2018 ATC04_05420 53246b432196cc4bfa0db2e0b1e43372 337 Gene3D G3DSA:3.40.630.30 2 123 6.5E-11 T 11-10-2018 ATC04_05420 53246b432196cc4bfa0db2e0b1e43372 337 Pfam PF13508 Acetyltransferase (GNAT) domain 54 116 2.0E-6 T 11-10-2018 IPR000182 GNAT domain ATC04_05420 53246b432196cc4bfa0db2e0b1e43372 337 Pfam PF04229 GrpB protein 165 332 3.7E-43 T 11-10-2018 IPR007344 GrpB/Dephospho-CoA kinase ATC04_05420 53246b432196cc4bfa0db2e0b1e43372 337 Gene3D G3DSA:3.30.460.10 162 335 2.1E-40 T 11-10-2018 ATC04_01650 da4c5064202fa7c0ab0e25b416c8aee7 207 Gene3D G3DSA:1.20.120.680 6 205 9.4E-49 T 11-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 ATC04_01650 da4c5064202fa7c0ab0e25b416c8aee7 207 Pfam PF04961 Formiminotransferase-cyclodeaminase 6 185 3.5E-46 T 11-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 ATC04_01650 da4c5064202fa7c0ab0e25b416c8aee7 207 SUPERFAMILY SSF101262 2 196 1.2E-39 T 11-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 391 562 1.5E-51 T 11-10-2018 IPR001162 UvrC family homology region ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 Pfam PF01541 GIY-YIG catalytic domain 19 93 1.2E-8 T 11-10-2018 IPR000305 GIY-YIG endonuclease ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 627 29.109 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 Pfam PF14520 Helix-hairpin-helix domain 577 629 7.7E-10 T 11-10-2018 ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 SMART SM00465 17 99 3.5E-17 T 11-10-2018 IPR000305 GIY-YIG endonuclease ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 Gene3D G3DSA:3.30.420.340 385 569 6.5E-52 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 SMART SM00278 576 595 8.4 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 SMART SM00278 608 627 0.0018 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 Gene3D G3DSA:1.10.150.20 570 629 5.7E-21 T 11-10-2018 ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 SUPERFAMILY SSF82771 17 101 3.53E-21 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 609 6.9E-156 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 Gene3D G3DSA:3.40.1440.10 5 103 3.9E-29 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 Pfam PF02151 UvrB/uvrC motif 210 242 6.6E-10 T 11-10-2018 IPR001943 UVR domain GO:0005515 ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 SUPERFAMILY SSF47781 521 629 4.45E-24 T 11-10-2018 IPR010994 RuvA domain 2-like ATC04_08180 8f90de3b65654e58460f6e166d3f7b23 645 SUPERFAMILY SSF46600 196 246 2.22E-11 T 11-10-2018 IPR036876 UVR domain superfamily ATC04_07455 cd9a19eddbfb235d8cdadf01e430d95c 145 Pfam PF06271 RDD family 68 138 2.6E-5 T 11-10-2018 IPR010432 RDD ATC04_07455 cd9a19eddbfb235d8cdadf01e430d95c 145 PIRSF PIRSF021697 3 144 8.5E-38 T 11-10-2018 IPR016795 Uncharacterised conserved protein UCP021697, membrane ATC04_01865 a2c18d79416768443aac0027650978da 657 SUPERFAMILY SSF51246 338 449 1.15E-36 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ATC04_01865 a2c18d79416768443aac0027650978da 657 Gene3D G3DSA:3.30.470.130 1 454 1.2E-182 T 11-10-2018 ATC04_01865 a2c18d79416768443aac0027650978da 657 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_01865 a2c18d79416768443aac0027650978da 657 Gene3D G3DSA:2.40.50.100 575 643 8.1E-21 T 11-10-2018 ATC04_01865 a2c18d79416768443aac0027650978da 657 Pfam PF00364 Biotin-requiring enzyme 576 642 5.9E-15 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ATC04_01865 a2c18d79416768443aac0027650978da 657 SUPERFAMILY SSF52440 1 113 2.23E-45 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ATC04_01865 a2c18d79416768443aac0027650978da 657 Pfam PF02785 Biotin carboxylase C-terminal domain 343 448 1.5E-34 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_01865 a2c18d79416768443aac0027650978da 657 SUPERFAMILY SSF51230 570 643 1.83E-19 T 11-10-2018 IPR011053 Single hybrid motif ATC04_01865 a2c18d79416768443aac0027650978da 657 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.4E-41 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_01865 a2c18d79416768443aac0027650978da 657 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 329 1.4E-66 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_01865 a2c18d79416768443aac0027650978da 657 SUPERFAMILY SSF56059 83 354 1.77E-61 T 11-10-2018 ATC04_01865 a2c18d79416768443aac0027650978da 657 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_01865 a2c18d79416768443aac0027650978da 657 SMART SM00878 343 447 1.7E-53 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_01865 a2c18d79416768443aac0027650978da 657 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 599 616 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_04640 22aca36da9e9c0fdbc92a2f9149c4f24 500 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 10 484 3.4E-204 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 ATC04_04640 22aca36da9e9c0fdbc92a2f9149c4f24 500 Gene3D G3DSA:3.40.605.10 27 461 9.8E-151 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_04640 22aca36da9e9c0fdbc92a2f9149c4f24 500 Pfam PF00171 Aldehyde dehydrogenase family 22 480 5.5E-142 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_04640 22aca36da9e9c0fdbc92a2f9149c4f24 500 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ATC04_04640 22aca36da9e9c0fdbc92a2f9149c4f24 500 SUPERFAMILY SSF53720 4 484 6.28E-149 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_04640 22aca36da9e9c0fdbc92a2f9149c4f24 500 Gene3D G3DSA:3.40.309.10 253 453 9.8E-151 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_02190 a1bc8ec28371a5b7d80c891cf36ca161 352 SUPERFAMILY SSF53590 8 345 1.01E-76 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like ATC04_02190 a1bc8ec28371a5b7d80c891cf36ca161 352 Gene3D G3DSA:3.90.245.10 2 348 4.9E-86 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like ATC04_02190 a1bc8ec28371a5b7d80c891cf36ca161 352 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 10 336 1.1E-71 T 11-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ATC04_12280 894b5cb9db26930e6b49c858d430144b 366 Gene3D G3DSA:1.10.3660.10 180 285 5.5E-22 T 11-10-2018 ATC04_12280 894b5cb9db26930e6b49c858d430144b 366 Gene3D G3DSA:3.40.50.720 8 179 3.7E-35 T 11-10-2018 ATC04_12280 894b5cb9db26930e6b49c858d430144b 366 SUPERFAMILY SSF51735 10 172 1.06E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_12280 894b5cb9db26930e6b49c858d430144b 366 SUPERFAMILY SSF48179 178 266 1.59E-22 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_12280 894b5cb9db26930e6b49c858d430144b 366 Gene3D G3DSA:3.30.70.260 297 362 8.9E-8 T 11-10-2018 ATC04_12280 894b5cb9db26930e6b49c858d430144b 366 SUPERFAMILY SSF55021 298 357 2.42E-7 T 11-10-2018 ATC04_12280 894b5cb9db26930e6b49c858d430144b 366 Pfam PF02153 Prephenate dehydrogenase 23 266 3.6E-40 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 SUPERFAMILY SSF53633 4 244 2.88E-77 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 SUPERFAMILY SSF55021 257 338 2.32E-17 T 11-10-2018 ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 SUPERFAMILY SSF55021 340 415 2.2E-21 T 11-10-2018 ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 414 4.8E-121 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 Pfam PF01842 ACT domain 275 334 7.8E-8 T 11-10-2018 IPR002912 ACT domain ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 Pfam PF13840 ACT domain 347 409 2.5E-9 T 11-10-2018 IPR027795 CASTOR, ACT domain ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 412 6.8E-112 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 PRINTS PR00474 Glutamate 5-kinase family signature 205 225 2.5E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 2.5E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 PRINTS PR00474 Glutamate 5-kinase family signature 153 180 2.5E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 Gene3D G3DSA:3.30.2130.10 254 428 4.0E-60 T 11-10-2018 ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 Pfam PF00696 Amino acid kinase family 3 231 5.3E-56 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 PIRSF PIRSF000726 57 421 2.4E-122 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 PIRSF PIRSF000726 1 62 3.5E-19 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ATC04_16465 d766ad11e012764b2e3b33c51caf4a6e 428 Gene3D G3DSA:3.40.1160.10 1 253 4.0E-92 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ATC04_08410 6869a323986cd50ad13484a4768ff8c0 132 SUPERFAMILY SSF46458 9 129 2.47E-29 T 11-10-2018 IPR009050 Globin-like superfamily ATC04_08410 6869a323986cd50ad13484a4768ff8c0 132 Gene3D G3DSA:1.10.490.10 9 130 3.2E-41 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 ATC04_08410 6869a323986cd50ad13484a4768ff8c0 132 Pfam PF01152 Bacterial-like globin 9 126 2.6E-31 T 11-10-2018 IPR001486 Truncated hemoglobin GO:0019825 ATC04_10230 1f8f7065aab692b80843d403361cb2dc 172 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 8 162 1.3E-53 T 11-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 ATC04_10230 1f8f7065aab692b80843d403361cb2dc 172 Gene3D G3DSA:3.40.50.300 7 170 6.5E-61 T 11-10-2018 ATC04_10230 1f8f7065aab692b80843d403361cb2dc 172 SUPERFAMILY SSF52540 7 167 6.2E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10230 1f8f7065aab692b80843d403361cb2dc 172 Pfam PF01202 Shikimate kinase 14 166 3.9E-12 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ATC04_06180 5d805a08c63435535da97e25801b161c 114 SMART SM00739 4 31 1.2E-5 T 11-10-2018 IPR005824 KOW ATC04_06180 5d805a08c63435535da97e25801b161c 114 Pfam PF00467 KOW motif 7 38 1.2E-8 T 11-10-2018 IPR005824 KOW ATC04_06180 5d805a08c63435535da97e25801b161c 114 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 108 21.772 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06180 5d805a08c63435535da97e25801b161c 114 SUPERFAMILY SSF50104 4 96 7.15E-29 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily ATC04_06180 5d805a08c63435535da97e25801b161c 114 Gene3D G3DSA:2.30.30.30 2 113 4.7E-34 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 ATC04_06180 5d805a08c63435535da97e25801b161c 114 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06180 5d805a08c63435535da97e25801b161c 114 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 113 2.1E-21 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06180 5d805a08c63435535da97e25801b161c 114 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 113 2.9E-32 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_09065 26ea0107985b5836799af89164ea3744 455 Pfam PF13416 Bacterial extracellular solute-binding protein 78 379 5.5E-39 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ATC04_09065 26ea0107985b5836799af89164ea3744 455 SUPERFAMILY SSF53850 61 438 7.06E-62 T 11-10-2018 ATC04_09065 26ea0107985b5836799af89164ea3744 455 Gene3D G3DSA:3.40.190.10 63 401 2.0E-79 T 11-10-2018 ATC04_09065 26ea0107985b5836799af89164ea3744 455 Gene3D G3DSA:3.40.190.10 174 432 2.0E-79 T 11-10-2018 ATC04_07470 2635d75cca68abbee73c07369c225608 215 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 77 128 2.0E-11 T 11-10-2018 ATC04_07470 2635d75cca68abbee73c07369c225608 215 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 72 87 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ATC04_07470 2635d75cca68abbee73c07369c225608 215 PIRSF PIRSF016262 4 215 2.9E-61 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATC04_07470 2635d75cca68abbee73c07369c225608 215 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 35 210 1.0E-39 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATC04_07470 2635d75cca68abbee73c07369c225608 215 SUPERFAMILY SSF55681 12 211 3.07E-59 T 11-10-2018 ATC04_07470 2635d75cca68abbee73c07369c225608 215 Hamap MF_00013 Octanoyltransferase [lipB]. 2 213 32.963 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATC04_07470 2635d75cca68abbee73c07369c225608 215 Gene3D G3DSA:3.30.930.10 3 211 5.8E-72 T 11-10-2018 ATC04_07470 2635d75cca68abbee73c07369c225608 215 Pfam PF03099 Biotin/lipoate A/B protein ligase family 63 163 3.9E-10 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ATC04_15260 ef41b4b75673918a8dcba90c00068301 293 SUPERFAMILY SSF54001 177 292 2.94E-34 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ATC04_15260 ef41b4b75673918a8dcba90c00068301 293 Pfam PF00877 NlpC/P60 family 193 281 5.4E-22 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ATC04_15260 ef41b4b75673918a8dcba90c00068301 293 Gene3D G3DSA:3.90.1720.10 99 286 4.9E-41 T 11-10-2018 ATC04_02770 03f586421b7425addaf1a2536a1c98e8 509 Pfam PF05199 GMC oxidoreductase 360 495 1.3E-37 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 ATC04_02770 03f586421b7425addaf1a2536a1c98e8 509 SUPERFAMILY SSF54373 310 447 2.35E-33 T 11-10-2018 ATC04_02770 03f586421b7425addaf1a2536a1c98e8 509 SUPERFAMILY SSF51905 6 506 5.76E-70 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_02770 03f586421b7425addaf1a2536a1c98e8 509 Gene3D G3DSA:3.50.50.60 6 495 7.2E-155 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_02770 03f586421b7425addaf1a2536a1c98e8 509 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 248 262 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ATC04_02770 03f586421b7425addaf1a2536a1c98e8 509 Pfam PF00732 GMC oxidoreductase 6 289 3.0E-64 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ATC04_02770 03f586421b7425addaf1a2536a1c98e8 509 PIRSF PIRSF000137 333 509 7.4E-42 T 11-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ATC04_02770 03f586421b7425addaf1a2536a1c98e8 509 PIRSF PIRSF000137 5 304 4.4E-75 T 11-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ATC04_02770 03f586421b7425addaf1a2536a1c98e8 509 Gene3D G3DSA:3.30.560.10 41 442 7.2E-155 T 11-10-2018 ATC04_01545 d54c252af74c60d226c881bffa2b38a3 335 SUPERFAMILY SSF51569 1 274 1.08E-67 T 11-10-2018 ATC04_01545 d54c252af74c60d226c881bffa2b38a3 335 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 3 334 4.5E-168 T 11-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 ATC04_01545 d54c252af74c60d226c881bffa2b38a3 335 Pfam PF00682 HMGL-like 4 260 1.7E-66 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ATC04_01545 d54c252af74c60d226c881bffa2b38a3 335 Gene3D G3DSA:1.10.8.60 273 335 4.0E-32 T 11-10-2018 ATC04_01545 d54c252af74c60d226c881bffa2b38a3 335 Pfam PF07836 DmpG-like communication domain 272 331 3.9E-31 T 11-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 ATC04_01545 d54c252af74c60d226c881bffa2b38a3 335 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 270 334 3.0E-26 T 11-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 ATC04_01545 d54c252af74c60d226c881bffa2b38a3 335 Gene3D G3DSA:3.20.20.70 1 266 3.2E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_01545 d54c252af74c60d226c881bffa2b38a3 335 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 335 206.308 T 11-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 ATC04_01545 d54c252af74c60d226c881bffa2b38a3 335 SUPERFAMILY SSF89000 286 332 5.49E-18 T 11-10-2018 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 Gene3D G3DSA:3.30.390.10 1 126 6.8E-54 T 11-10-2018 IPR029017 Enolase-like, N-terminal ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 420 4.7E-133 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 SUPERFAMILY SSF54826 3 139 2.21E-55 T 11-10-2018 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 SMART SM01192 139 423 2.4E-219 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 PRINTS PR00148 Enolase signature 161 174 1.5E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 PRINTS PR00148 Enolase signature 107 123 1.5E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 PRINTS PR00148 Enolase signature 361 378 1.5E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 PRINTS PR00148 Enolase signature 37 51 1.5E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 PRINTS PR00148 Enolase signature 309 320 1.5E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 PRINTS PR00148 Enolase signature 332 346 1.5E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 SUPERFAMILY SSF51604 139 422 1.84E-127 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 SMART SM01193 4 134 1.2E-91 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 ProSitePatterns PS00164 Enolase signature. 332 345 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 Gene3D G3DSA:3.20.20.120 128 424 1.2E-132 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 Hamap MF_00318 Enolase [eno]. 2 409 45.087 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 423 8.2E-205 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 Pfam PF03952 Enolase, N-terminal domain 4 134 4.2E-58 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATC04_14400 a2a3da964e7bb009075e0b7b414302a8 426 PIRSF PIRSF001400 1 423 2.9E-188 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATC04_15515 5e1a043b85758971f281fa14d9d97ee8 217 SUPERFAMILY SSF52540 10 215 1.19E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15515 5e1a043b85758971f281fa14d9d97ee8 217 Pfam PF02223 Thymidylate kinase 16 209 1.3E-49 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 ATC04_15515 5e1a043b85758971f281fa14d9d97ee8 217 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 10 209 7.7E-55 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ATC04_15515 5e1a043b85758971f281fa14d9d97ee8 217 ProSitePatterns PS01331 Thymidylate kinase signature. 101 113 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ATC04_15515 5e1a043b85758971f281fa14d9d97ee8 217 Gene3D G3DSA:3.40.50.300 7 217 5.6E-64 T 11-10-2018 ATC04_15515 5e1a043b85758971f281fa14d9d97ee8 217 Hamap MF_00165 Thymidylate kinase [tmk]. 12 217 30.264 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ATC04_01485 f2cfd32a75ca4ec721a402db8cf42e02 255 Pfam PF01144 Coenzyme A transferase 82 212 2.0E-6 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_01485 f2cfd32a75ca4ec721a402db8cf42e02 255 SUPERFAMILY SSF100950 7 251 3.7E-48 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_01485 f2cfd32a75ca4ec721a402db8cf42e02 255 Gene3D G3DSA:3.40.1080.10 7 248 8.6E-45 T 11-10-2018 ATC04_01485 f2cfd32a75ca4ec721a402db8cf42e02 255 SMART SM00882 12 214 0.005 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_09935 7ef6b5897cc4f7a4de23928640c21cfd 268 Pfam PF01925 Sulfite exporter TauE/SafE 11 260 1.9E-35 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ATC04_03750 9448ced93df5677dfb050a1ded1b07e8 178 SUPERFAMILY SSF46689 1 41 6.16E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_03750 9448ced93df5677dfb050a1ded1b07e8 178 SUPERFAMILY SSF48498 49 173 3.0E-21 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_03750 9448ced93df5677dfb050a1ded1b07e8 178 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 49 173 1.6E-13 T 11-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 ATC04_03750 9448ced93df5677dfb050a1ded1b07e8 178 Gene3D G3DSA:1.10.357.10 1 177 6.4E-51 T 11-10-2018 ATC04_00390 9cd0d127dc8f7499f0b38206b81fbbb7 474 Pfam PF03070 TENA/THI-4/PQQC family 284 464 7.1E-31 T 11-10-2018 IPR004305 Thiaminase-2/PQQC ATC04_00390 9cd0d127dc8f7499f0b38206b81fbbb7 474 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 3 256 1.2E-77 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_00390 9cd0d127dc8f7499f0b38206b81fbbb7 474 SUPERFAMILY SSF53613 3 257 8.57E-66 T 11-10-2018 IPR029056 Ribokinase-like ATC04_00390 9cd0d127dc8f7499f0b38206b81fbbb7 474 SUPERFAMILY SSF48613 267 464 3.12E-50 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_00390 9cd0d127dc8f7499f0b38206b81fbbb7 474 Pfam PF08543 Phosphomethylpyrimidine kinase 10 254 2.1E-79 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 ATC04_00390 9cd0d127dc8f7499f0b38206b81fbbb7 474 Gene3D G3DSA:3.40.1190.20 1 259 1.7E-87 T 11-10-2018 IPR029056 Ribokinase-like ATC04_00390 9cd0d127dc8f7499f0b38206b81fbbb7 474 Gene3D G3DSA:1.20.910.10 260 470 2.7E-52 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATC04_09095 0414df6a5f7c2bb366653cc7fb789b8a 525 SUPERFAMILY SSF55486 2 520 2.08E-121 T 11-10-2018 ATC04_09095 0414df6a5f7c2bb366653cc7fb789b8a 525 Pfam PF01432 Peptidase family M3 83 520 1.8E-104 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 ATC04_09095 0414df6a5f7c2bb366653cc7fb789b8a 525 Gene3D G3DSA:1.10.1370.10 2 453 1.8E-186 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ATC04_09095 0414df6a5f7c2bb366653cc7fb789b8a 525 Gene3D G3DSA:1.10.1370.40 193 517 1.8E-186 T 11-10-2018 ATC04_11970 3c422c15324baeaf1a100c5f60c5a1ac 365 SUPERFAMILY SSF52540 117 355 1.41E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11970 3c422c15324baeaf1a100c5f60c5a1ac 365 Pfam PF03193 RsgA GTPase 99 290 2.9E-37 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 ATC04_11970 3c422c15324baeaf1a100c5f60c5a1ac 365 Gene3D G3DSA:3.40.50.300 102 290 3.1E-39 T 11-10-2018 ATC04_11970 3c422c15324baeaf1a100c5f60c5a1ac 365 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 35 358 25.373 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 ATC04_10540 41c7ce5ba69aabc36e37a2caa63b6e4b 232 Pfam PF14622 Ribonuclease-III-like 16 142 4.6E-37 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ATC04_10540 41c7ce5ba69aabc36e37a2caa63b6e4b 232 Gene3D G3DSA:1.10.1520.10 1 150 1.7E-47 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 ATC04_10540 41c7ce5ba69aabc36e37a2caa63b6e4b 232 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 221 4.3E-68 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 ATC04_10540 41c7ce5ba69aabc36e37a2caa63b6e4b 232 Pfam PF00035 Double-stranded RNA binding motif 158 223 2.4E-11 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain ATC04_10540 41c7ce5ba69aabc36e37a2caa63b6e4b 232 SUPERFAMILY SSF69065 4 160 2.27E-48 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 ATC04_10540 41c7ce5ba69aabc36e37a2caa63b6e4b 232 SMART SM00358 158 224 1.0E-15 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain ATC04_10540 41c7ce5ba69aabc36e37a2caa63b6e4b 232 SMART SM00535 18 151 3.9E-55 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ATC04_10540 41c7ce5ba69aabc36e37a2caa63b6e4b 232 Gene3D G3DSA:3.30.160.20 155 223 8.8E-16 T 11-10-2018 ATC04_10540 41c7ce5ba69aabc36e37a2caa63b6e4b 232 Hamap MF_00104 Ribonuclease 3 [rnc]. 7 220 28.711 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 ATC04_10540 41c7ce5ba69aabc36e37a2caa63b6e4b 232 SUPERFAMILY SSF54768 112 224 1.23E-19 T 11-10-2018 ATC04_14550 c489ac4d4494d2011c7bf7306e6b5b72 196 Pfam PF12802 MarR family 46 108 4.2E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_14550 c489ac4d4494d2011c7bf7306e6b5b72 196 SMART SM00347 40 144 6.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_14550 c489ac4d4494d2011c7bf7306e6b5b72 196 SUPERFAMILY SSF46785 25 157 4.96E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_14550 c489ac4d4494d2011c7bf7306e6b5b72 196 Gene3D G3DSA:1.10.10.10 19 163 3.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_05555 184698fab1b01f07a38f439acc180cbd 467 Gene3D G3DSA:1.10.10.2840 343 467 3.8E-21 T 11-10-2018 ATC04_05555 184698fab1b01f07a38f439acc180cbd 467 Pfam PF07905 Purine catabolism regulatory protein-like family 9 125 2.4E-23 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain ATC04_05555 184698fab1b01f07a38f439acc180cbd 467 Pfam PF13556 PucR C-terminal helix-turn-helix domain 405 462 1.2E-19 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ATC04_12340 33d247c9f3e804abaf078436febbdec4 505 Gene3D G3DSA:1.10.4100.10 43 469 4.4E-71 T 11-10-2018 ATC04_12340 33d247c9f3e804abaf078436febbdec4 505 Gene3D G3DSA:3.30.1330.120 285 434 4.4E-71 T 11-10-2018 ATC04_12340 33d247c9f3e804abaf078436febbdec4 505 SUPERFAMILY SSF103378 18 486 2.09E-128 T 11-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 ATC04_12340 33d247c9f3e804abaf078436febbdec4 505 Pfam PF03972 MmgE/PrpD family 20 477 2.6E-131 T 11-10-2018 IPR005656 MmgE/PrpD GO:0016829 ATC04_05855 887cb239434572f7de6998754e6ff429 278 SUPERFAMILY SSF47090 211 272 2.46E-5 T 11-10-2018 IPR036365 PGBD-like superfamily ATC04_05855 887cb239434572f7de6998754e6ff429 278 Gene3D G3DSA:3.30.1380.10 23 130 7.7E-8 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ATC04_05855 887cb239434572f7de6998754e6ff429 278 SUPERFAMILY SSF55166 50 132 2.59E-8 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ATC04_05855 887cb239434572f7de6998754e6ff429 278 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 68 130 3.6E-9 T 11-10-2018 IPR039561 Peptidase M15C GO:0008233 ATC04_08835 cabecf73f14849dbdc000f0c45588fe6 253 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 17 240 3.3E-53 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ATC04_08835 cabecf73f14849dbdc000f0c45588fe6 253 Gene3D G3DSA:3.20.20.10 3 251 1.5E-82 T 11-10-2018 IPR029066 PLP-binding barrel ATC04_08835 cabecf73f14849dbdc000f0c45588fe6 253 PIRSF PIRSF004848 6 246 3.2E-64 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ATC04_08835 cabecf73f14849dbdc000f0c45588fe6 253 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 19 239 27.779 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ATC04_08835 cabecf73f14849dbdc000f0c45588fe6 253 SUPERFAMILY SSF51419 12 238 4.71E-70 T 11-10-2018 IPR029066 PLP-binding barrel ATC04_08835 cabecf73f14849dbdc000f0c45588fe6 253 Pfam PF01168 Alanine racemase, N-terminal domain 20 240 3.9E-26 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 SUPERFAMILY SSF47384 599 678 6.08E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 Pfam PF00512 His Kinase A (phospho-acceptor) domain 611 678 7.4E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 SUPERFAMILY SSF55874 668 825 2.75E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 Gene3D G3DSA:1.10.287.130 598 681 6.6E-13 T 11-10-2018 ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 Gene3D G3DSA:3.40.50.300 9 218 3.4E-92 T 11-10-2018 ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 Gene3D G3DSA:1.20.120.620 385 490 4.0E-12 T 11-10-2018 IPR038318 KdpD, transmembrane domain superfamily ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 SMART SM00387 720 829 7.7E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 SMART SM00388 610 678 4.1E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 Gene3D G3DSA:3.30.565.10 685 833 6.6E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 721 825 2.6E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 SUPERFAMILY SSF52402 240 344 8.37E-10 T 11-10-2018 ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 Pfam PF13493 Domain of unknown function (DUF4118) 392 495 1.4E-21 T 11-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 Gene3D G3DSA:3.40.50.620 229 363 3.4E-7 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 Pfam PF00582 Universal stress protein family 240 344 2.0E-6 T 11-10-2018 IPR006016 UspA ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 11 219 6.4E-92 T 11-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 PRINTS PR00344 Bacterial sensor protein C-terminal signature 789 807 3.0E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_18060 a9893fffb1ff17998d82f38e70894af2 834 PRINTS PR00344 Bacterial sensor protein C-terminal signature 756 770 3.0E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_13610 d6fc649c39d64e6804f0e56cc17b6666 300 Gene3D G3DSA:3.40.50.10490 2 159 2.2E-23 T 11-10-2018 ATC04_13610 d6fc649c39d64e6804f0e56cc17b6666 300 SUPERFAMILY SSF53697 10 296 1.05E-39 T 11-10-2018 ATC04_13610 d6fc649c39d64e6804f0e56cc17b6666 300 Gene3D G3DSA:3.40.50.10490 160 287 1.0E-17 T 11-10-2018 ATC04_13610 d6fc649c39d64e6804f0e56cc17b6666 300 Pfam PF01380 SIS domain 41 149 4.6E-6 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ATC04_07845 f5a67e5f454186a3199d57d91649eda0 520 Gene3D G3DSA:3.40.50.150 222 515 7.7E-56 T 11-10-2018 ATC04_07845 f5a67e5f454186a3199d57d91649eda0 520 SUPERFAMILY SSF48013 57 211 3.53E-33 T 11-10-2018 IPR035926 NusB-like superfamily ATC04_07845 f5a67e5f454186a3199d57d91649eda0 520 SUPERFAMILY SSF53335 195 515 1.34E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_07845 f5a67e5f454186a3199d57d91649eda0 520 Gene3D G3DSA:1.10.940.10 53 196 3.9E-39 T 11-10-2018 IPR035926 NusB-like superfamily ATC04_07845 f5a67e5f454186a3199d57d91649eda0 520 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 498 515 1.7E-21 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ATC04_07845 f5a67e5f454186a3199d57d91649eda0 520 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 283 297 1.7E-21 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ATC04_07845 f5a67e5f454186a3199d57d91649eda0 520 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 437 453 1.7E-21 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ATC04_07845 f5a67e5f454186a3199d57d91649eda0 520 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 387 399 1.7E-21 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ATC04_07845 f5a67e5f454186a3199d57d91649eda0 520 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 318 328 1.7E-21 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ATC04_07845 f5a67e5f454186a3199d57d91649eda0 520 Pfam PF01189 16S rRNA methyltransferase RsmB/F 313 513 1.1E-46 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 ATC04_07845 f5a67e5f454186a3199d57d91649eda0 520 Pfam PF01029 NusB family 57 179 4.0E-23 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ATC04_10820 b871ae4b4b44837385d99eaa0fe3ec82 820 Gene3D G3DSA:2.160.20.10 282 389 5.6E-19 T 11-10-2018 IPR012334 Pectin lyase fold ATC04_10820 b871ae4b4b44837385d99eaa0fe3ec82 820 Pfam PF13229 Right handed beta helix region 492 651 3.6E-15 T 11-10-2018 IPR039448 Right handed beta helix domain ATC04_10820 b871ae4b4b44837385d99eaa0fe3ec82 820 Gene3D G3DSA:2.160.20.10 425 717 7.5E-24 T 11-10-2018 IPR012334 Pectin lyase fold ATC04_10820 b871ae4b4b44837385d99eaa0fe3ec82 820 SUPERFAMILY SSF51126 287 740 6.68E-41 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor ATC04_10820 b871ae4b4b44837385d99eaa0fe3ec82 820 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 590 634 3.2E-5 T 11-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 ATC04_10820 b871ae4b4b44837385d99eaa0fe3ec82 820 SMART SM00710 620 641 480.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ATC04_10820 b871ae4b4b44837385d99eaa0fe3ec82 820 SMART SM00710 496 517 2400.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ATC04_10820 b871ae4b4b44837385d99eaa0fe3ec82 820 SMART SM00710 518 540 1600.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ATC04_10820 b871ae4b4b44837385d99eaa0fe3ec82 820 SMART SM00710 573 595 1300.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ATC04_10820 b871ae4b4b44837385d99eaa0fe3ec82 820 SMART SM00710 642 664 5300.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ATC04_10820 b871ae4b4b44837385d99eaa0fe3ec82 820 SMART SM00710 597 619 500.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ATC04_00835 13cd92614f1c2f7f7140fbe7ad621582 152 ProSitePatterns PS00651 Ribosomal protein L9 signature. 14 41 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00835 13cd92614f1c2f7f7140fbe7ad621582 152 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 1.9E-25 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal ATC04_00835 13cd92614f1c2f7f7140fbe7ad621582 152 TIGRFAM TIGR00158 L9: ribosomal protein bL9 3 148 1.5E-36 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_00835 13cd92614f1c2f7f7140fbe7ad621582 152 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 2 149 24.023 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_00835 13cd92614f1c2f7f7140fbe7ad621582 152 Gene3D G3DSA:3.40.5.10 2 50 1.1E-18 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00835 13cd92614f1c2f7f7140fbe7ad621582 152 Pfam PF01281 Ribosomal protein L9, N-terminal domain 3 47 1.8E-19 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00835 13cd92614f1c2f7f7140fbe7ad621582 152 Gene3D G3DSA:3.10.430.100 61 149 2.9E-24 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily ATC04_00835 13cd92614f1c2f7f7140fbe7ad621582 152 SUPERFAMILY SSF55653 58 148 1.7E-22 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily ATC04_00835 13cd92614f1c2f7f7140fbe7ad621582 152 SUPERFAMILY SSF55658 3 57 1.17E-16 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal ATC04_16725 e6795b184494110b7a87963dd1cc6589 209 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 118 197 7.7E-31 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ATC04_16725 e6795b184494110b7a87963dd1cc6589 209 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 38 114 3.2E-10 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ATC04_16725 e6795b184494110b7a87963dd1cc6589 209 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 41 198 36.388 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 ATC04_16725 e6795b184494110b7a87963dd1cc6589 209 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 168 174 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ATC04_16725 e6795b184494110b7a87963dd1cc6589 209 SUPERFAMILY SSF46767 118 198 1.83E-26 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 ATC04_16725 e6795b184494110b7a87963dd1cc6589 209 Gene3D G3DSA:3.30.160.70 37 113 1.1E-17 T 11-10-2018 ATC04_16725 e6795b184494110b7a87963dd1cc6589 209 SUPERFAMILY SSF53155 37 115 1.88E-16 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ATC04_16725 e6795b184494110b7a87963dd1cc6589 209 Gene3D G3DSA:1.10.10.10 117 200 1.6E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16725 e6795b184494110b7a87963dd1cc6589 209 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 119 197 2.2E-26 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ATC04_10985 0c66a0156312ac312a0bbfb88399fc5c 356 SUPERFAMILY SSF51735 2 152 7.69E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_10985 0c66a0156312ac312a0bbfb88399fc5c 356 Gene3D G3DSA:3.40.50.720 6 329 5.9E-82 T 11-10-2018 ATC04_10985 0c66a0156312ac312a0bbfb88399fc5c 356 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 123 1.8E-26 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ATC04_10985 0c66a0156312ac312a0bbfb88399fc5c 356 SUPERFAMILY SSF55347 130 315 3.05E-18 T 11-10-2018 ATC04_10985 0c66a0156312ac312a0bbfb88399fc5c 356 Gene3D G3DSA:3.30.360.10 129 296 5.9E-82 T 11-10-2018 ATC04_10150 ca95aa72881bd3a03f8a1bb62cd9a727 175 Gene3D G3DSA:3.30.1060.10 1 162 8.3E-59 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ATC04_10150 ca95aa72881bd3a03f8a1bb62cd9a727 175 Pfam PF01625 Peptide methionine sulfoxide reductase 4 153 9.3E-56 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ATC04_10150 ca95aa72881bd3a03f8a1bb62cd9a727 175 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 158 32.074 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ATC04_10150 ca95aa72881bd3a03f8a1bb62cd9a727 175 SUPERFAMILY SSF55068 3 164 2.88E-63 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ATC04_10150 ca95aa72881bd3a03f8a1bb62cd9a727 175 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 153 2.1E-50 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ATC04_18390 8f98c4b8dc8c3eb43b2efb2f655d463a 151 Pfam PF01526 Tn3 transposase DDE domain 2 129 3.9E-52 T 11-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 ATC04_01870 9270eab52d9b4d224b5422cf49324c90 531 SUPERFAMILY SSF52096 237 514 3.11E-84 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_01870 9270eab52d9b4d224b5422cf49324c90 531 Gene3D G3DSA:3.90.226.10 1 269 7.3E-93 T 11-10-2018 ATC04_01870 9270eab52d9b4d224b5422cf49324c90 531 SUPERFAMILY SSF52096 25 270 2.65E-71 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_01870 9270eab52d9b4d224b5422cf49324c90 531 Pfam PF01039 Carboxyl transferase domain 48 516 2.8E-143 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 ATC04_01870 9270eab52d9b4d224b5422cf49324c90 531 Gene3D G3DSA:3.90.226.10 271 531 2.1E-99 T 11-10-2018 ATC04_11765 f1d1feb5c4609212d9a30b478791bc89 402 Gene3D G3DSA:2.30.40.10 16 399 1.5E-109 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_11765 f1d1feb5c4609212d9a30b478791bc89 402 Gene3D G3DSA:3.20.20.140 64 367 1.5E-109 T 11-10-2018 ATC04_11765 f1d1feb5c4609212d9a30b478791bc89 402 SUPERFAMILY SSF51338 15 401 4.98E-7 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_11765 f1d1feb5c4609212d9a30b478791bc89 402 Pfam PF01979 Amidohydrolase family 59 388 6.9E-19 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ATC04_11765 f1d1feb5c4609212d9a30b478791bc89 402 SUPERFAMILY SSF51556 63 373 1.78E-81 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_11765 f1d1feb5c4609212d9a30b478791bc89 402 PIRSF PIRSF038994 6 402 1.0E-93 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 ATC04_09190 847773e89434eb0f0c6062b16190fc24 207 SUPERFAMILY SSF55174 5 207 1.7E-57 T 11-10-2018 ATC04_09190 847773e89434eb0f0c6062b16190fc24 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 9 207 1.5E-67 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ATC04_09190 847773e89434eb0f0c6062b16190fc24 207 Pfam PF01479 S4 domain 95 141 9.6E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_09190 847773e89434eb0f0c6062b16190fc24 207 SMART SM01390 7 93 1.3E-34 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 ATC04_09190 847773e89434eb0f0c6062b16190fc24 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 92 116 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_09190 847773e89434eb0f0c6062b16190fc24 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 9 93 1.1E-21 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 ATC04_09190 847773e89434eb0f0c6062b16190fc24 207 SMART SM00363 94 156 9.1E-16 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_09190 847773e89434eb0f0c6062b16190fc24 207 Gene3D G3DSA:3.10.290.10 93 192 5.2E-64 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ATC04_09190 847773e89434eb0f0c6062b16190fc24 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 31.669 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ATC04_09190 847773e89434eb0f0c6062b16190fc24 207 Gene3D G3DSA:1.10.1050.10 10 207 5.2E-64 T 11-10-2018 ATC04_07920 49b4c3e8494c991e2e1c95592b8ad286 274 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 59 76 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 ATC04_07920 49b4c3e8494c991e2e1c95592b8ad286 274 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 2 265 32.854 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ATC04_07920 49b4c3e8494c991e2e1c95592b8ad286 274 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 262 4.5E-81 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ATC04_07920 49b4c3e8494c991e2e1c95592b8ad286 274 Gene3D G3DSA:3.20.20.70 1 274 5.0E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_07920 49b4c3e8494c991e2e1c95592b8ad286 274 SUPERFAMILY SSF51366 12 265 6.83E-75 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ATC04_04005 1868db8584477f69317990451eb7b7b1 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 144 2.4E-18 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATC04_04005 1868db8584477f69317990451eb7b7b1 348 Pfam PF00107 Zinc-binding dehydrogenase 187 308 7.5E-15 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATC04_04005 1868db8584477f69317990451eb7b7b1 348 Gene3D G3DSA:3.40.50.720 164 294 1.2E-85 T 11-10-2018 ATC04_04005 1868db8584477f69317990451eb7b7b1 348 Gene3D G3DSA:3.90.180.10 17 334 1.2E-85 T 11-10-2018 ATC04_04005 1868db8584477f69317990451eb7b7b1 348 SUPERFAMILY SSF50129 10 185 1.08E-40 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_04005 1868db8584477f69317990451eb7b7b1 348 SUPERFAMILY SSF51735 150 312 4.76E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_06560 c719e79426e6695b42e0fd76d1000a98 1010 SUPERFAMILY SSF52540 251 865 3.48E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06560 c719e79426e6695b42e0fd76d1000a98 1010 Pfam PF13086 AAA domain 253 327 3.5E-9 T 11-10-2018 ATC04_06560 c719e79426e6695b42e0fd76d1000a98 1010 Gene3D G3DSA:3.40.50.300 669 878 2.6E-34 T 11-10-2018 ATC04_06560 c719e79426e6695b42e0fd76d1000a98 1010 Pfam PF13087 AAA domain 652 857 1.4E-22 T 11-10-2018 ATC04_16815 69ca4782bcff8aa836a8b918dc8355b5 534 Gene3D G3DSA:1.25.40.10 1 231 1.7E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_16815 69ca4782bcff8aa836a8b918dc8355b5 534 SUPERFAMILY SSF48452 98 186 5.06E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_16815 69ca4782bcff8aa836a8b918dc8355b5 534 SUPERFAMILY SSF48452 11 116 1.52E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_15710 a1e86cd05f2b9b5229f9c838783fc592 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 627 649 3.0E-33 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATC04_15710 a1e86cd05f2b9b5229f9c838783fc592 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 519 538 3.0E-33 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATC04_15710 a1e86cd05f2b9b5229f9c838783fc592 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 549 569 3.0E-33 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATC04_15710 a1e86cd05f2b9b5229f9c838783fc592 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 491 515 3.0E-33 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATC04_15710 a1e86cd05f2b9b5229f9c838783fc592 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 604 619 3.0E-33 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATC04_15710 a1e86cd05f2b9b5229f9c838783fc592 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 458 476 3.0E-33 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATC04_15710 a1e86cd05f2b9b5229f9c838783fc592 696 Gene3D G3DSA:3.40.50.1820 11 654 9.7E-110 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_15710 a1e86cd05f2b9b5229f9c838783fc592 696 SUPERFAMILY SSF50993 11 410 2.28E-31 T 11-10-2018 ATC04_15710 a1e86cd05f2b9b5229f9c838783fc592 696 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 11 223 1.0E-15 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 ATC04_15710 a1e86cd05f2b9b5229f9c838783fc592 696 Pfam PF00326 Prolyl oligopeptidase family 495 694 1.9E-36 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATC04_15710 a1e86cd05f2b9b5229f9c838783fc592 696 Gene3D G3DSA:2.130.10.120 61 418 9.7E-110 T 11-10-2018 ATC04_15710 a1e86cd05f2b9b5229f9c838783fc592 696 SUPERFAMILY SSF53474 427 693 2.95E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_07565 1f0c68307274709d14b1376fcb06e729 378 SUPERFAMILY SSF53649 36 376 3.43E-52 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ATC04_07565 1f0c68307274709d14b1376fcb06e729 378 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 40 362 5.8E-36 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 ATC04_07565 1f0c68307274709d14b1376fcb06e729 378 Gene3D G3DSA:3.40.720.10 33 376 3.7E-51 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ATC04_00470 40df9a6144a44024a13cca3c74ec6d65 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ATC04_00470 40df9a6144a44024a13cca3c74ec6d65 262 Gene3D G3DSA:3.90.226.10 2 262 1.8E-83 T 11-10-2018 ATC04_00470 40df9a6144a44024a13cca3c74ec6d65 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 261 9.1E-59 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ATC04_00470 40df9a6144a44024a13cca3c74ec6d65 262 SUPERFAMILY SSF52096 2 261 1.57E-82 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_05345 76d42f010e71703618a7b272edf4d882 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 22 262 6.5E-36 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ATC04_05345 76d42f010e71703618a7b272edf4d882 264 Gene3D G3DSA:3.90.226.10 6 264 1.2E-57 T 11-10-2018 ATC04_05345 76d42f010e71703618a7b272edf4d882 264 SUPERFAMILY SSF52096 6 263 2.21E-55 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_10320 645b453a73e9095d698f6b8849a15c62 330 Pfam PF00589 Phage integrase family 164 315 1.7E-41 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATC04_10320 645b453a73e9095d698f6b8849a15c62 330 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 19 330 51.147 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD ATC04_10320 645b453a73e9095d698f6b8849a15c62 330 SUPERFAMILY SSF56349 16 322 6.77E-47 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATC04_10320 645b453a73e9095d698f6b8849a15c62 330 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 22 103 1.5E-20 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ATC04_10320 645b453a73e9095d698f6b8849a15c62 330 Gene3D G3DSA:1.10.443.10 152 324 2.4E-52 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ATC04_10320 645b453a73e9095d698f6b8849a15c62 330 Gene3D G3DSA:1.10.150.130 18 113 4.8E-23 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal ATC04_09535 85688881e73877a9b496fe3a24e1a94f 350 Pfam PF00355 Rieske [2Fe-2S] domain 266 322 5.9E-10 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATC04_09535 85688881e73877a9b496fe3a24e1a94f 350 SUPERFAMILY SSF50022 190 348 1.36E-28 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ATC04_09535 85688881e73877a9b496fe3a24e1a94f 350 Gene3D G3DSA:2.102.10.10 189 347 1.6E-40 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ATC04_08190 ae88a4c9b89e2a787958ac1204cfca0f 341 SUPERFAMILY SSF142338 21 332 2.22E-75 T 11-10-2018 ATC04_08190 ae88a4c9b89e2a787958ac1204cfca0f 341 Pfam PF01933 Uncharacterised protein family UPF0052 24 295 2.8E-65 T 11-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 ATC04_08190 ae88a4c9b89e2a787958ac1204cfca0f 341 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 24 297 1.1E-76 T 11-10-2018 IPR010119 Gluconeogenesis factor ATC04_08190 ae88a4c9b89e2a787958ac1204cfca0f 341 Gene3D G3DSA:3.40.50.12300 19 339 3.8E-89 T 11-10-2018 IPR038136 Gluconeogenesis factor superfamily ATC04_08190 ae88a4c9b89e2a787958ac1204cfca0f 341 Hamap MF_00973 Gluconeogenesis factor. 20 338 30.034 T 11-10-2018 IPR010119 Gluconeogenesis factor ATC04_09440 b6ddba7b879904591ebee8235050c43f 342 SUPERFAMILY SSF52540 93 297 8.07E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09440 b6ddba7b879904591ebee8235050c43f 342 Gene3D G3DSA:3.40.50.300 119 325 4.4E-75 T 11-10-2018 ATC04_09440 b6ddba7b879904591ebee8235050c43f 342 Pfam PF02562 PhoH-like protein 122 325 6.1E-94 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 ATC04_13300 f0a35d49c645f2705415211d07a62031 264 Gene3D G3DSA:3.40.50.10320 35 258 1.4E-51 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ATC04_13300 f0a35d49c645f2705415211d07a62031 264 SUPERFAMILY SSF102588 61 256 3.4E-44 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ATC04_13300 f0a35d49c645f2705415211d07a62031 264 Pfam PF02585 GlcNAc-PI de-N-acetylase 62 177 6.4E-24 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 ATC04_09220 5de288db26a7b58089f77a3206c8557b 295 SUPERFAMILY SSF53223 19 120 1.73E-27 T 11-10-2018 ATC04_09220 5de288db26a7b58089f77a3206c8557b 295 Gene3D G3DSA:3.40.50.10860 24 270 1.1E-60 T 11-10-2018 ATC04_09220 5de288db26a7b58089f77a3206c8557b 295 Gene3D G3DSA:3.40.50.720 121 260 1.1E-60 T 11-10-2018 ATC04_09220 5de288db26a7b58089f77a3206c8557b 295 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 25 107 4.3E-23 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ATC04_09220 5de288db26a7b58089f77a3206c8557b 295 SUPERFAMILY SSF51735 121 278 1.44E-15 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_06035 443a2e8d63d147f1ad2e8f11c41c86a2 233 SUPERFAMILY SSF56808 7 226 2.09E-80 T 11-10-2018 IPR023674 Ribosomal protein L1-like ATC04_06035 443a2e8d63d147f1ad2e8f11c41c86a2 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 41.269 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ATC04_06035 443a2e8d63d147f1ad2e8f11c41c86a2 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06035 443a2e8d63d147f1ad2e8f11c41c86a2 233 PIRSF PIRSF002155 1 227 1.7E-69 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06035 443a2e8d63d147f1ad2e8f11c41c86a2 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.1E-98 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ATC04_06035 443a2e8d63d147f1ad2e8f11c41c86a2 233 Gene3D G3DSA:3.30.190.20 21 225 5.5E-79 T 11-10-2018 ATC04_06035 443a2e8d63d147f1ad2e8f11c41c86a2 233 Pfam PF00687 Ribosomal protein L1p/L10e family 35 220 3.8E-51 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein ATC04_06035 443a2e8d63d147f1ad2e8f11c41c86a2 233 Gene3D G3DSA:3.40.50.790 68 159 5.5E-79 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich ATC04_01830 227f1411c886ef3175bde3e457848252 405 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 236 375 5.0E-7 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ATC04_01830 227f1411c886ef3175bde3e457848252 405 Gene3D G3DSA:1.10.540.10 5 118 4.1E-19 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_01830 227f1411c886ef3175bde3e457848252 405 PIRSF PIRSF016578 131 391 3.2E-8 T 11-10-2018 ATC04_01830 227f1411c886ef3175bde3e457848252 405 PIRSF PIRSF016578 4 100 1.1E-8 T 11-10-2018 ATC04_01830 227f1411c886ef3175bde3e457848252 405 SUPERFAMILY SSF56645 21 214 1.83E-35 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_01830 227f1411c886ef3175bde3e457848252 405 Gene3D G3DSA:1.20.140.10 216 399 3.2E-43 T 11-10-2018 ATC04_01830 227f1411c886ef3175bde3e457848252 405 Gene3D G3DSA:2.40.110.10 119 215 2.1E-24 T 11-10-2018 ATC04_01830 227f1411c886ef3175bde3e457848252 405 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 22 116 4.4E-6 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_01830 227f1411c886ef3175bde3e457848252 405 SUPERFAMILY SSF47203 231 375 1.47E-6 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_09685 950c118e5ecbc215b382b0c560f01cd0 559 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 257 404 7.2E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ATC04_09685 950c118e5ecbc215b382b0c560f01cd0 559 ProSitePatterns PS00674 AAA-protein family signature. 375 393 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 ATC04_09685 950c118e5ecbc215b382b0c560f01cd0 559 Gene3D G3DSA:2.40.50.140 144 215 3.3E-15 T 11-10-2018 ATC04_09685 950c118e5ecbc215b382b0c560f01cd0 559 Gene3D G3DSA:1.10.8.60 406 429 1.2E-59 T 11-10-2018 ATC04_09685 950c118e5ecbc215b382b0c560f01cd0 559 SMART SM00382 253 407 6.0E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_09685 950c118e5ecbc215b382b0c560f01cd0 559 Pfam PF16450 Proteasomal ATPase OB/ID domain 94 214 3.1E-40 T 11-10-2018 IPR032501 Proteasomal ATPase, OB/ID domain ATC04_09685 950c118e5ecbc215b382b0c560f01cd0 559 TIGRFAM TIGR03689 pup_AAA: proteasome ATPase 28 552 1.6E-229 T 11-10-2018 IPR022482 Proteasome ATPase GO:0000502|GO:0010498|GO:0016887|GO:0019941 ATC04_09685 950c118e5ecbc215b382b0c560f01cd0 559 Gene3D G3DSA:3.40.50.300 216 405 1.2E-59 T 11-10-2018 ATC04_09685 950c118e5ecbc215b382b0c560f01cd0 559 Gene3D G3DSA:2.40.50.140 89 143 1.5E-13 T 11-10-2018 ATC04_09685 950c118e5ecbc215b382b0c560f01cd0 559 SUPERFAMILY SSF52540 215 440 6.08E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09685 950c118e5ecbc215b382b0c560f01cd0 559 Hamap MF_02112 Proteasome-associated ATPase [mpa]. 29 553 48.043 T 11-10-2018 IPR022482 Proteasome ATPase GO:0000502|GO:0010498|GO:0016887|GO:0019941 ATC04_03775 34d669b4c62cca3eafdc10ffd7301f8a 358 Gene3D G3DSA:1.20.1250.20 1 344 8.4E-24 T 11-10-2018 ATC04_03775 34d669b4c62cca3eafdc10ffd7301f8a 358 Pfam PF07690 Major Facilitator Superfamily 2 308 1.5E-24 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_03775 34d669b4c62cca3eafdc10ffd7301f8a 358 SUPERFAMILY SSF103473 2 351 9.94E-30 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 285 44.875 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 2.9E-53 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 113 140 2.9E-53 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 259 284 2.9E-53 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 237 259 2.9E-53 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 91 113 2.9E-53 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 2.9E-53 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 285 1.2E-98 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 Pfam PF00551 Formyl transferase 91 267 4.6E-39 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 PIRSF PIRSF036480 4 286 6.1E-111 T 11-10-2018 ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 Gene3D G3DSA:3.30.70.260 2 88 1.3E-23 T 11-10-2018 ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 SUPERFAMILY SSF55021 6 88 2.79E-11 T 11-10-2018 ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 Gene3D G3DSA:3.40.50.170 90 285 2.6E-70 T 11-10-2018 ATC04_01750 97dc6fa8055d9c55b47b070b13e33533 286 SUPERFAMILY SSF53328 91 285 1.83E-61 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATC04_16250 7eb5ebcf1614bf6693473eb07eac99cd 1087 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 187 198 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site ATC04_16250 7eb5ebcf1614bf6693473eb07eac99cd 1087 SUPERFAMILY SSF52743 169 679 2.88E-55 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ATC04_16250 7eb5ebcf1614bf6693473eb07eac99cd 1087 Pfam PF00082 Subtilase family 182 669 7.8E-38 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATC04_16250 7eb5ebcf1614bf6693473eb07eac99cd 1087 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 270 280 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site ATC04_16250 7eb5ebcf1614bf6693473eb07eac99cd 1087 Gene3D G3DSA:3.50.30.30 416 615 1.1E-65 T 11-10-2018 ATC04_16250 7eb5ebcf1614bf6693473eb07eac99cd 1087 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 615 625 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site ATC04_16250 7eb5ebcf1614bf6693473eb07eac99cd 1087 PRINTS PR00723 Subtilisin serine protease family (S8) signature 614 630 5.7E-18 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ATC04_16250 7eb5ebcf1614bf6693473eb07eac99cd 1087 PRINTS PR00723 Subtilisin serine protease family (S8) signature 266 279 5.7E-18 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ATC04_16250 7eb5ebcf1614bf6693473eb07eac99cd 1087 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 201 5.7E-18 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ATC04_16250 7eb5ebcf1614bf6693473eb07eac99cd 1087 Gene3D G3DSA:3.40.50.200 181 671 1.1E-65 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ATC04_16250 7eb5ebcf1614bf6693473eb07eac99cd 1087 Pfam PF02225 PA domain 454 536 1.3E-5 T 11-10-2018 IPR003137 PA domain ATC04_07095 9e3387ec367b9ecbd0ca13ba721cdfef 153 Pfam PF00588 SpoU rRNA Methylase family 2 141 2.3E-28 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ATC04_07095 9e3387ec367b9ecbd0ca13ba721cdfef 153 Gene3D G3DSA:3.40.1280.10 1 153 6.6E-51 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATC04_07095 9e3387ec367b9ecbd0ca13ba721cdfef 153 PIRSF PIRSF029256 1 153 2.0E-51 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 ATC04_07095 9e3387ec367b9ecbd0ca13ba721cdfef 153 SUPERFAMILY SSF75217 2 152 1.31E-37 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ATC04_07095 9e3387ec367b9ecbd0ca13ba721cdfef 153 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 29.045 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 ATC04_15695 807509ffafe507b8313c4a0e823f1a40 325 SUPERFAMILY SSF51735 111 288 2.08E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_15695 807509ffafe507b8313c4a0e823f1a40 325 Gene3D G3DSA:3.40.50.720 120 262 4.1E-109 T 11-10-2018 ATC04_15695 807509ffafe507b8313c4a0e823f1a40 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 87 1.2E-8 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATC04_15695 807509ffafe507b8313c4a0e823f1a40 325 SMART SM00829 10 323 3.2E-53 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATC04_15695 807509ffafe507b8313c4a0e823f1a40 325 SUPERFAMILY SSF50129 1 139 1.98E-37 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_15695 807509ffafe507b8313c4a0e823f1a40 325 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 3 325 5.7E-130 T 11-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 ATC04_15695 807509ffafe507b8313c4a0e823f1a40 325 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 ATC04_15695 807509ffafe507b8313c4a0e823f1a40 325 Pfam PF00107 Zinc-binding dehydrogenase 151 274 1.4E-36 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATC04_15695 807509ffafe507b8313c4a0e823f1a40 325 Gene3D G3DSA:3.90.180.10 13 323 4.1E-109 T 11-10-2018 ATC04_13650 7d7878d0908eb02233b66a7890c25068 192 Pfam PF05962 HutD 7 182 4.5E-35 T 11-10-2018 IPR010282 Uncharacterised protein family HutD/Ves ATC04_13650 7d7878d0908eb02233b66a7890c25068 192 SUPERFAMILY SSF51182 3 178 2.31E-27 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ATC04_13650 7d7878d0908eb02233b66a7890c25068 192 Gene3D G3DSA:2.60.120.10 117 173 5.6E-27 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_13650 7d7878d0908eb02233b66a7890c25068 192 Gene3D G3DSA:2.60.120.10 8 116 5.6E-27 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_02350 e27a6b511a113690898904768d49c991 158 SUPERFAMILY SSF52833 6 154 6.58E-47 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_02350 e27a6b511a113690898904768d49c991 158 Gene3D G3DSA:3.40.30.10 7 157 1.8E-47 T 11-10-2018 ATC04_02350 e27a6b511a113690898904768d49c991 158 Pfam PF00578 AhpC/TSA family 10 138 1.7E-39 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ATC04_02350 e27a6b511a113690898904768d49c991 158 PIRSF PIRSF000239 4 156 1.1E-23 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ATC04_03255 c395271ee14ec58f8b18c5b648edb1a4 470 Gene3D G3DSA:3.30.559.10 246 469 3.1E-75 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ATC04_03255 c395271ee14ec58f8b18c5b648edb1a4 470 Gene3D G3DSA:4.10.320.10 168 218 1.5E-15 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ATC04_03255 c395271ee14ec58f8b18c5b648edb1a4 470 Gene3D G3DSA:2.40.50.100 1 83 1.7E-21 T 11-10-2018 ATC04_03255 c395271ee14ec58f8b18c5b648edb1a4 470 Pfam PF02817 e3 binding domain 178 212 1.9E-13 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ATC04_03255 c395271ee14ec58f8b18c5b648edb1a4 470 Pfam PF00364 Biotin-requiring enzyme 3 75 5.3E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ATC04_03255 c395271ee14ec58f8b18c5b648edb1a4 470 SUPERFAMILY SSF47005 176 217 6.15E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ATC04_03255 c395271ee14ec58f8b18c5b648edb1a4 470 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 241 469 1.2E-73 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ATC04_03255 c395271ee14ec58f8b18c5b648edb1a4 470 SUPERFAMILY SSF51230 2 92 3.93E-24 T 11-10-2018 IPR011053 Single hybrid motif ATC04_03255 c395271ee14ec58f8b18c5b648edb1a4 470 SUPERFAMILY SSF52777 229 469 1.29E-73 T 11-10-2018 ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 126 135 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 SMART SM00382 26 342 0.0013 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 Gene3D G3DSA:1.20.120.1080 407 512 3.1E-15 T 11-10-2018 ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 Pfam PF04408 Helicase associated domain (HA2) 428 517 1.5E-14 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 SMART SM00847 426 521 1.1E-28 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 SMART SM00490 257 362 3.0E-12 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 Gene3D G3DSA:3.40.50.300 4 195 7.8E-76 T 11-10-2018 ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 Pfam PF00271 Helicase conserved C-terminal domain 240 361 9.3E-9 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 Gene3D G3DSA:3.40.50.300 196 379 1.5E-52 T 11-10-2018 ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 588 665 7.6E-21 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 SMART SM00487 9 202 4.8E-27 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 SUPERFAMILY SSF52540 8 529 2.12E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 4 979 0.0 T 11-10-2018 IPR010222 RNA helicase HrpA GO:0004004 ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 Pfam PF11898 Domain of unknown function (DUF3418) 679 1324 5.6E-204 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal ATC04_11890 75db9ee849318fbc4695c60af4965641 1330 Pfam PF00270 DEAD/DEAH box helicase 21 167 6.8E-8 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 PIRSF PIRSF005499 8 740 8.7E-282 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 SMART SM00322 587 652 9.2E-15 T 11-10-2018 IPR004087 K Homology domain GO:0003676 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 Pfam PF00013 KH domain 591 648 4.6E-11 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 TIGRFAM TIGR02696 pppGpp_PNP: guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase 5 730 0.0 T 11-10-2018 IPR014069 Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase GO:0004654|GO:0005737|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 SUPERFAMILY SSF50249 655 728 1.0E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_12885 5d77726502670fae39fbd743a886b80f 741 SUPERFAMILY SSF46915 269 353 4.97E-17 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 SUPERFAMILY SSF54211 330 500 8.6E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_12885 5d77726502670fae39fbd743a886b80f 741 SUPERFAMILY SSF55666 482 581 8.74E-23 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 SUPERFAMILY SSF54791 590 676 5.9E-20 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 10 734 26.883 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 18 729 2.9E-259 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 SUPERFAMILY SSF54211 7 152 3.64E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_12885 5d77726502670fae39fbd743a886b80f 741 Gene3D G3DSA:3.30.230.70 264 585 7.8E-101 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 SUPERFAMILY SSF55666 153 265 1.39E-23 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 Pfam PF00575 S1 RNA binding domain 656 728 2.7E-13 T 11-10-2018 IPR003029 S1 domain GO:0003676 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 SMART SM00316 657 731 5.0E-17 T 11-10-2018 IPR022967 RNA-binding domain, S1 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 Gene3D G3DSA:2.40.50.140 586 713 3.2E-49 T 11-10-2018 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 Gene3D G3DSA:3.30.230.70 5 255 9.7E-84 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 274 351 2.6E-17 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 Pfam PF01138 3' exoribonuclease family, domain 1 356 488 1.8E-15 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATC04_12885 5d77726502670fae39fbd743a886b80f 741 Pfam PF01138 3' exoribonuclease family, domain 1 20 152 2.9E-16 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATC04_16035 92524bc831ef3a8648751f24ff5cde6c 216 SMART SM00882 12 208 3.1E-50 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_16035 92524bc831ef3a8648751f24ff5cde6c 216 SUPERFAMILY SSF100950 10 209 5.15E-56 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_16035 92524bc831ef3a8648751f24ff5cde6c 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 10 213 2.4E-76 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 ATC04_16035 92524bc831ef3a8648751f24ff5cde6c 216 Gene3D G3DSA:3.40.1080.10 6 214 4.2E-73 T 11-10-2018 ATC04_16035 92524bc831ef3a8648751f24ff5cde6c 216 Pfam PF01144 Coenzyme A transferase 13 188 1.1E-28 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_13620 1e94e1c48eb307656b5e82a6978821a6 399 Gene3D G3DSA:2.30.40.10 19 393 2.0E-117 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_13620 1e94e1c48eb307656b5e82a6978821a6 399 Gene3D G3DSA:3.20.20.140 60 355 2.0E-117 T 11-10-2018 ATC04_13620 1e94e1c48eb307656b5e82a6978821a6 399 Hamap MF_00372 Imidazolonepropionase [hutI]. 3 395 39.443 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATC04_13620 1e94e1c48eb307656b5e82a6978821a6 399 SUPERFAMILY SSF51338 8 394 1.3E-15 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_13620 1e94e1c48eb307656b5e82a6978821a6 399 TIGRFAM TIGR01224 hutI: imidazolonepropionase 23 393 1.3E-94 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATC04_13620 1e94e1c48eb307656b5e82a6978821a6 399 Pfam PF01979 Amidohydrolase family 57 370 4.6E-14 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ATC04_13620 1e94e1c48eb307656b5e82a6978821a6 399 SUPERFAMILY SSF51556 59 356 4.43E-62 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_12010 946bf66e149bca1429b334d576e9c6a9 477 SUPERFAMILY SSF51261 254 477 9.94E-47 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_12010 946bf66e149bca1429b334d576e9c6a9 477 Gene3D G3DSA:2.70.70.10 245 477 1.6E-39 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_12010 946bf66e149bca1429b334d576e9c6a9 477 Pfam PF01551 Peptidase family M23 373 473 9.5E-26 T 11-10-2018 IPR016047 Peptidase M23 ATC04_12010 946bf66e149bca1429b334d576e9c6a9 477 SUPERFAMILY SSF57997 32 122 6.21E-7 T 11-10-2018 ATC04_09125 51731c1faaf5e8dec5e22207526add0d 343 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 231 4.2E-104 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 ATC04_09125 51731c1faaf5e8dec5e22207526add0d 343 Gene3D G3DSA:3.40.50.300 17 178 4.7E-37 T 11-10-2018 ATC04_09125 51731c1faaf5e8dec5e22207526add0d 343 Gene3D G3DSA:1.10.10.10 254 334 5.3E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_09125 51731c1faaf5e8dec5e22207526add0d 343 SUPERFAMILY SSF52540 17 248 4.15E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09125 51731c1faaf5e8dec5e22207526add0d 343 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 247 328 2.0E-24 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ATC04_09125 51731c1faaf5e8dec5e22207526add0d 343 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 250 324 1.6E-28 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ATC04_09125 51731c1faaf5e8dec5e22207526add0d 343 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 343 148.199 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ATC04_09125 51731c1faaf5e8dec5e22207526add0d 343 SUPERFAMILY SSF46785 254 327 1.45E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_09125 51731c1faaf5e8dec5e22207526add0d 343 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 21 323 1.2E-129 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ATC04_09125 51731c1faaf5e8dec5e22207526add0d 343 SMART SM00382 48 181 1.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_09125 51731c1faaf5e8dec5e22207526add0d 343 Gene3D G3DSA:1.10.8.60 179 253 4.1E-25 T 11-10-2018 ATC04_14045 4f63abae3a01c94874d15118dd133c47 483 Gene3D G3DSA:3.90.550.10 6 237 1.2E-61 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_14045 4f63abae3a01c94874d15118dd133c47 483 SUPERFAMILY SSF53448 9 262 5.42E-57 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_14045 4f63abae3a01c94874d15118dd133c47 483 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 8 461 38.249 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 ATC04_14045 4f63abae3a01c94874d15118dd133c47 483 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 404 438 4.5E-6 T 11-10-2018 IPR001451 Hexapeptide repeat ATC04_14045 4f63abae3a01c94874d15118dd133c47 483 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 277 310 4.2E-4 T 11-10-2018 IPR001451 Hexapeptide repeat ATC04_14045 4f63abae3a01c94874d15118dd133c47 483 Gene3D G3DSA:2.160.10.10 238 464 1.3E-58 T 11-10-2018 ATC04_14045 4f63abae3a01c94874d15118dd133c47 483 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 10 462 2.7E-162 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 ATC04_14045 4f63abae3a01c94874d15118dd133c47 483 SUPERFAMILY SSF51161 258 450 1.48E-39 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ATC04_14045 4f63abae3a01c94874d15118dd133c47 483 Pfam PF12804 MobA-like NTP transferase domain 11 141 2.0E-21 T 11-10-2018 IPR025877 MobA-like NTP transferase ATC04_11260 ab516ed92c81df7a03c12d231bba5e06 248 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 172 242 1.6E-24 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) ATC04_11260 ab516ed92c81df7a03c12d231bba5e06 248 PRINTS PR00956 Flagellar motor switch protein FliN signature 188 204 2.5E-22 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ATC04_11260 ab516ed92c81df7a03c12d231bba5e06 248 PRINTS PR00956 Flagellar motor switch protein FliN signature 217 232 2.5E-22 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ATC04_11260 ab516ed92c81df7a03c12d231bba5e06 248 PRINTS PR00956 Flagellar motor switch protein FliN signature 204 217 2.5E-22 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ATC04_11260 ab516ed92c81df7a03c12d231bba5e06 248 PRINTS PR00956 Flagellar motor switch protein FliN signature 171 187 2.5E-22 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ATC04_11260 ab516ed92c81df7a03c12d231bba5e06 248 SUPERFAMILY SSF101801 170 243 3.79E-21 T 11-10-2018 IPR036429 SpoA-like superfamily ATC04_11260 ab516ed92c81df7a03c12d231bba5e06 248 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 171 242 4.3E-27 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 ATC04_11260 ab516ed92c81df7a03c12d231bba5e06 248 Gene3D G3DSA:2.30.330.10 158 246 1.1E-28 T 11-10-2018 IPR036429 SpoA-like superfamily ATC04_07405 364392e3ccc1e7278c6d8471413d1d38 162 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 150 72.717 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 ATC04_07405 364392e3ccc1e7278c6d8471413d1d38 162 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 144 1.5E-45 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 ATC04_07405 364392e3ccc1e7278c6d8471413d1d38 162 Pfam PF03477 ATP cone domain 47 132 1.8E-13 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 ATC04_00420 ae8e15609f84787d0cbde8f9ac8c08bf 105 SMART SM00886 2 96 5.0E-28 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel ATC04_00420 ae8e15609f84787d0cbde8f9ac8c08bf 105 SUPERFAMILY SSF54909 1 96 1.39E-24 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_00420 ae8e15609f84787d0cbde8f9ac8c08bf 105 Pfam PF07876 Stress responsive A/B Barrel Domain 2 95 6.7E-20 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel ATC04_00420 ae8e15609f84787d0cbde8f9ac8c08bf 105 Gene3D G3DSA:3.30.70.100 1 99 1.4E-22 T 11-10-2018 ATC04_07370 33d53f907e3dccea69d152b7fac0e63a 183 Hamap MF_01197 Cell division protein SepF [sepF]. 2 173 20.69 T 11-10-2018 IPR023052 Cell division protein SepF GO:0090529 ATC04_07370 33d53f907e3dccea69d152b7fac0e63a 183 Gene3D G3DSA:3.30.110.150 91 174 4.8E-27 T 11-10-2018 IPR038594 SepF-like superfamily ATC04_07370 33d53f907e3dccea69d152b7fac0e63a 183 Pfam PF04472 Cell division protein SepF 94 165 2.3E-25 T 11-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 ATC04_07440 4cb02f6d83664847ebc1339ea44a84e3 155 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 100 2.8E-23 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ATC04_07440 4cb02f6d83664847ebc1339ea44a84e3 155 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 89 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ATC04_07440 4cb02f6d83664847ebc1339ea44a84e3 155 SUPERFAMILY SSF53927 2 136 8.53E-43 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ATC04_07440 4cb02f6d83664847ebc1339ea44a84e3 155 Gene3D G3DSA:3.40.140.10 2 155 1.4E-58 T 11-10-2018 ATC04_07150 052a38d6b82909315b781ef5a575393f 901 Gene3D G3DSA:2.60.40.420 614 749 3.1E-37 T 11-10-2018 IPR008972 Cupredoxin ATC04_07150 052a38d6b82909315b781ef5a575393f 901 SUPERFAMILY SSF49503 630 766 1.62E-34 T 11-10-2018 IPR008972 Cupredoxin ATC04_07150 052a38d6b82909315b781ef5a575393f 901 Pfam PF07732 Multicopper oxidase 643 751 1.0E-13 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 ATC04_07150 052a38d6b82909315b781ef5a575393f 901 PRINTS PR00695 Copper containing nitrite reductase signature 659 675 2.9E-9 T 11-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 ATC04_07150 052a38d6b82909315b781ef5a575393f 901 PRINTS PR00695 Copper containing nitrite reductase signature 733 749 2.9E-9 T 11-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 ATC04_07150 052a38d6b82909315b781ef5a575393f 901 PRINTS PR00695 Copper containing nitrite reductase signature 716 731 2.9E-9 T 11-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 ATC04_07150 052a38d6b82909315b781ef5a575393f 901 Gene3D G3DSA:2.60.40.420 750 899 1.2E-51 T 11-10-2018 IPR008972 Cupredoxin ATC04_07150 052a38d6b82909315b781ef5a575393f 901 SUPERFAMILY SSF49503 751 900 7.7E-37 T 11-10-2018 IPR008972 Cupredoxin ATC04_07150 052a38d6b82909315b781ef5a575393f 901 Pfam PF13473 Cupredoxin-like domain 484 547 9.0E-8 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain ATC04_07150 052a38d6b82909315b781ef5a575393f 901 Gene3D G3DSA:2.60.40.420 472 576 2.1E-12 T 11-10-2018 IPR008972 Cupredoxin ATC04_07150 052a38d6b82909315b781ef5a575393f 901 SUPERFAMILY SSF49503 486 580 1.01E-12 T 11-10-2018 IPR008972 Cupredoxin ATC04_18440 cc3a766c6741d44a69c539843ce10443 136 Gene3D G3DSA:1.10.1220.180 57 136 1.2E-25 T 11-10-2018 ATC04_01370 25621e00cb37df088eabc66df7eccf79 128 PIRSF PIRSF003230 1 128 7.5E-20 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ATC04_01370 25621e00cb37df088eabc66df7eccf79 128 Gene3D G3DSA:3.10.129.10 1 126 2.1E-27 T 11-10-2018 ATC04_01370 25621e00cb37df088eabc66df7eccf79 128 Pfam PF03061 Thioesterase superfamily 10 93 3.4E-7 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ATC04_01370 25621e00cb37df088eabc66df7eccf79 128 SUPERFAMILY SSF54637 3 124 3.74E-26 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_07475 f5b0a357fc8867120d214be81c51ebcd 454 Gene3D G3DSA:1.10.510.10 5 208 6.6E-33 T 11-10-2018 ATC04_07475 f5b0a357fc8867120d214be81c51ebcd 454 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 75 87 - T 11-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 ATC04_07475 f5b0a357fc8867120d214be81c51ebcd 454 Pfam PF00069 Protein kinase domain 10 191 7.7E-23 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ATC04_07475 f5b0a357fc8867120d214be81c51ebcd 454 SUPERFAMILY SSF56112 14 204 1.62E-34 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ATC04_07475 f5b0a357fc8867120d214be81c51ebcd 454 SMART SM00220 1 198 1.5E-8 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ATC04_02345 36363765ca17b1bbfacea1df17519e28 461 Gene3D G3DSA:3.40.50.620 10 208 6.5E-86 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_02345 36363765ca17b1bbfacea1df17519e28 461 Gene3D G3DSA:1.25.40.80 133 292 6.5E-86 T 11-10-2018 ATC04_02345 36363765ca17b1bbfacea1df17519e28 461 Gene3D G3DSA:1.10.579.10 296 458 1.6E-59 T 11-10-2018 ATC04_02345 36363765ca17b1bbfacea1df17519e28 461 SUPERFAMILY SSF52425 9 210 1.83E-52 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 ATC04_02345 36363765ca17b1bbfacea1df17519e28 461 SUPERFAMILY SSF48173 194 456 2.35E-87 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 ATC04_02345 36363765ca17b1bbfacea1df17519e28 461 Pfam PF00875 DNA photolyase 10 173 1.7E-45 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 ATC04_02345 36363765ca17b1bbfacea1df17519e28 461 Pfam PF03441 FAD binding domain of DNA photolyase 280 433 7.1E-64 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 ATC04_02345 36363765ca17b1bbfacea1df17519e28 461 PRINTS PR00147 DNA photolyase signature 144 160 1.3E-19 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ATC04_02345 36363765ca17b1bbfacea1df17519e28 461 PRINTS PR00147 DNA photolyase signature 392 406 1.3E-19 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ATC04_02345 36363765ca17b1bbfacea1df17519e28 461 PRINTS PR00147 DNA photolyase signature 333 349 1.3E-19 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ATC04_02345 36363765ca17b1bbfacea1df17519e28 461 PRINTS PR00147 DNA photolyase signature 353 371 1.3E-19 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ATC04_10090 0dd6b7734bf47a42f2a3b8910f9d56a0 190 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 165 7.6E-41 T 11-10-2018 IPR023635 Peptide deformylase ATC04_10090 0dd6b7734bf47a42f2a3b8910f9d56a0 190 PIRSF PIRSF004749 1 178 4.6E-43 T 11-10-2018 IPR023635 Peptide deformylase ATC04_10090 0dd6b7734bf47a42f2a3b8910f9d56a0 190 Hamap MF_00163 Peptide deformylase [def]. 2 170 27.597 T 11-10-2018 IPR023635 Peptide deformylase ATC04_10090 0dd6b7734bf47a42f2a3b8910f9d56a0 190 Pfam PF01327 Polypeptide deformylase 4 157 1.7E-44 T 11-10-2018 IPR023635 Peptide deformylase ATC04_10090 0dd6b7734bf47a42f2a3b8910f9d56a0 190 Gene3D G3DSA:3.90.45.10 1 190 8.5E-63 T 11-10-2018 IPR036821 Peptide deformylase superfamily ATC04_10090 0dd6b7734bf47a42f2a3b8910f9d56a0 190 SUPERFAMILY SSF56420 3 182 3.53E-52 T 11-10-2018 IPR036821 Peptide deformylase superfamily ATC04_10090 0dd6b7734bf47a42f2a3b8910f9d56a0 190 PRINTS PR01576 Peptide deformylase signature 128 157 9.3E-31 T 11-10-2018 IPR023635 Peptide deformylase ATC04_10090 0dd6b7734bf47a42f2a3b8910f9d56a0 190 PRINTS PR01576 Peptide deformylase signature 33 62 9.3E-31 T 11-10-2018 IPR023635 Peptide deformylase ATC04_10090 0dd6b7734bf47a42f2a3b8910f9d56a0 190 PRINTS PR01576 Peptide deformylase signature 97 108 9.3E-31 T 11-10-2018 IPR023635 Peptide deformylase ATC04_10090 0dd6b7734bf47a42f2a3b8910f9d56a0 190 PRINTS PR01576 Peptide deformylase signature 109 127 9.3E-31 T 11-10-2018 IPR023635 Peptide deformylase ATC04_11495 0f0132508a155bc1829ced2912ec3016 97 Pfam PF03724 META domain 15 91 4.6E-13 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ ATC04_11495 0f0132508a155bc1829ced2912ec3016 97 Gene3D G3DSA:2.40.128.270 3 90 1.7E-13 T 11-10-2018 IPR038670 HslJ-like superfamily ATC04_01645 09af43fc662d50706eb097ef7a8ba525 839 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 722 813 3.2E-19 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ATC04_01645 09af43fc662d50706eb097ef7a8ba525 839 SUPERFAMILY SSF101790 740 826 4.41E-23 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal ATC04_01645 09af43fc662d50706eb097ef7a8ba525 839 SUPERFAMILY SSF54373 215 333 2.08E-32 T 11-10-2018 ATC04_01645 09af43fc662d50706eb097ef7a8ba525 839 Pfam PF16350 FAD dependent oxidoreductase central domain 373 428 1.3E-14 T 11-10-2018 IPR032503 FAD dependent oxidoreductase, central domain ATC04_01645 09af43fc662d50706eb097ef7a8ba525 839 Gene3D G3DSA:3.30.1360.120 423 704 8.3E-110 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ATC04_01645 09af43fc662d50706eb097ef7a8ba525 839 Gene3D G3DSA:3.30.9.10 81 333 9.0E-134 T 11-10-2018 ATC04_01645 09af43fc662d50706eb097ef7a8ba525 839 Gene3D G3DSA:2.40.30.110 737 813 6.6E-33 T 11-10-2018 ATC04_01645 09af43fc662d50706eb097ef7a8ba525 839 SUPERFAMILY SSF103025 423 736 5.02E-91 T 11-10-2018 ATC04_01645 09af43fc662d50706eb097ef7a8ba525 839 Pfam PF01266 FAD dependent oxidoreductase 6 370 1.0E-42 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATC04_01645 09af43fc662d50706eb097ef7a8ba525 839 Gene3D G3DSA:3.50.50.60 7 389 9.0E-134 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_01645 09af43fc662d50706eb097ef7a8ba525 839 SUPERFAMILY SSF51905 6 416 3.32E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_01645 09af43fc662d50706eb097ef7a8ba525 839 Pfam PF01571 Aminomethyltransferase folate-binding domain 430 715 8.9E-72 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain ATC04_01645 09af43fc662d50706eb097ef7a8ba525 839 Gene3D G3DSA:3.30.70.1400 503 730 8.3E-110 T 11-10-2018 ATC04_04410 6e8598ed44573cc72885f756e960b53d 265 Gene3D G3DSA:1.10.10.10 197 264 8.3E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_04410 6e8598ed44573cc72885f756e960b53d 265 Pfam PF00753 Metallo-beta-lactamase superfamily 27 190 7.1E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_04410 6e8598ed44573cc72885f756e960b53d 265 SUPERFAMILY SSF56281 8 261 1.19E-40 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_04410 6e8598ed44573cc72885f756e960b53d 265 Gene3D G3DSA:3.60.15.10 2 193 8.6E-39 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_04410 6e8598ed44573cc72885f756e960b53d 265 SMART SM00849 29 190 4.4E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_07420 0e362a5220d56615ca339714986a4ab8 278 Pfam PF02548 Ketopantoate hydroxymethyltransferase 15 271 1.2E-104 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ATC04_07420 0e362a5220d56615ca339714986a4ab8 278 SUPERFAMILY SSF51621 15 273 1.1E-97 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ATC04_07420 0e362a5220d56615ca339714986a4ab8 278 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 16 276 2.2E-90 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ATC04_07420 0e362a5220d56615ca339714986a4ab8 278 Gene3D G3DSA:3.20.20.60 14 276 9.3E-104 T 11-10-2018 ATC04_07420 0e362a5220d56615ca339714986a4ab8 278 PIRSF PIRSF000388 7 278 6.4E-104 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ATC04_07420 0e362a5220d56615ca339714986a4ab8 278 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 16 276 40.502 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 SUPERFAMILY SSF55424 316 401 1.13E-19 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 1.6E-16 T 11-10-2018 ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.6E-16 T 11-10-2018 ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 1.6E-16 T 11-10-2018 ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.6E-16 T 11-10-2018 ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 8.9E-18 T 11-10-2018 ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 8.9E-18 T 11-10-2018 ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 8.9E-18 T 11-10-2018 ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 8.9E-18 T 11-10-2018 ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 8.9E-18 T 11-10-2018 ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 Gene3D G3DSA:3.50.50.60 6 305 6.0E-98 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 SUPERFAMILY SSF51905 147 313 3.02E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 Gene3D G3DSA:3.50.50.60 115 241 6.0E-98 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 304 4.5E-53 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 SUPERFAMILY SSF51905 4 193 9.72E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 Pfam PF14759 Reductase C-terminal 323 401 9.3E-13 T 11-10-2018 IPR028202 Reductase, C-terminal ATC04_04025 ebedebd58b1073ca84a50672480d2152 402 Gene3D G3DSA:3.30.390.30 323 402 1.3E-15 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_09590 d2190f9f678cf167c2554c5cbab400d3 118 SMART SM00419 38 88 3.5E-4 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ATC04_09590 d2190f9f678cf167c2554c5cbab400d3 118 SUPERFAMILY SSF46785 11 104 2.73E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_09590 d2190f9f678cf167c2554c5cbab400d3 118 Pfam PF01022 Bacterial regulatory protein, arsR family 32 76 9.8E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_09590 d2190f9f678cf167c2554c5cbab400d3 118 SMART SM00418 25 103 8.5E-24 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_09590 d2190f9f678cf167c2554c5cbab400d3 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 74 89 3.0E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_09590 d2190f9f678cf167c2554c5cbab400d3 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 42 3.0E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_09590 d2190f9f678cf167c2554c5cbab400d3 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 3.0E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_09590 d2190f9f678cf167c2554c5cbab400d3 118 Gene3D G3DSA:1.10.10.10 6 117 1.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_12635 5a92a62743a85bb50f780ea7f185b833 202 Gene3D G3DSA:3.40.50.150 7 199 5.1E-41 T 11-10-2018 ATC04_12635 5a92a62743a85bb50f780ea7f185b833 202 SUPERFAMILY SSF53335 30 183 2.07E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_12635 5a92a62743a85bb50f780ea7f185b833 202 Pfam PF05175 Methyltransferase small domain 30 175 4.0E-31 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ATC04_04165 3a2bd465876783c74391eddf510b6212 218 SMART SM00421 154 211 1.5E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_04165 3a2bd465876783c74391eddf510b6212 218 SUPERFAMILY SSF52172 1 179 4.36E-32 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_04165 3a2bd465876783c74391eddf510b6212 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 1.9E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_04165 3a2bd465876783c74391eddf510b6212 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 1.9E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_04165 3a2bd465876783c74391eddf510b6212 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 1.9E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_04165 3a2bd465876783c74391eddf510b6212 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 3.4E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_04165 3a2bd465876783c74391eddf510b6212 218 Gene3D G3DSA:3.40.50.12740 4 217 4.5E-66 T 11-10-2018 ATC04_04165 3a2bd465876783c74391eddf510b6212 218 Pfam PF00072 Response regulator receiver domain 6 116 3.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_04165 3a2bd465876783c74391eddf510b6212 218 SMART SM00448 4 116 4.7E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_04165 3a2bd465876783c74391eddf510b6212 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_09055 cbccb2021234010e50e52e5e14cb57d5 299 SUPERFAMILY SSF161098 60 286 6.41E-64 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_09055 cbccb2021234010e50e52e5e14cb57d5 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 294 1.3E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_09055 cbccb2021234010e50e52e5e14cb57d5 299 Gene3D G3DSA:1.10.3720.10 56 297 1.1E-74 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_01280 e7b370c38d45874c25fb4e56a3921705 116 SMART SM00418 34 115 4.3E-23 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_01280 e7b370c38d45874c25fb4e56a3921705 116 Gene3D G3DSA:1.10.10.10 17 116 1.9E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_01280 e7b370c38d45874c25fb4e56a3921705 116 SUPERFAMILY SSF46785 30 115 3.22E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_01280 e7b370c38d45874c25fb4e56a3921705 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 1.3E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_01280 e7b370c38d45874c25fb4e56a3921705 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 86 101 1.3E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_01280 e7b370c38d45874c25fb4e56a3921705 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 51 1.3E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_01280 e7b370c38d45874c25fb4e56a3921705 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 69 1.3E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_01280 e7b370c38d45874c25fb4e56a3921705 116 Pfam PF01022 Bacterial regulatory protein, arsR family 41 88 1.4E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_15685 dae9c16e014e32e7dd00970abe5725de 63 Pfam PF04328 Selenoprotein, putative 4 63 7.1E-21 T 11-10-2018 IPR007423 Selenoprotein, putative ATC04_02005 3f1900a9f5b16079960e6cf1521f5f1d 460 SUPERFAMILY SSF51556 73 391 2.06E-101 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_02005 3f1900a9f5b16079960e6cf1521f5f1d 460 SUPERFAMILY SSF51338 19 445 8.48E-20 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_02005 3f1900a9f5b16079960e6cf1521f5f1d 460 Pfam PF01979 Amidohydrolase family 69 443 8.1E-36 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ATC04_02005 3f1900a9f5b16079960e6cf1521f5f1d 460 TIGRFAM TIGR03178 allantoinase: allantoinase 20 447 6.2E-166 T 11-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 ATC04_02005 3f1900a9f5b16079960e6cf1521f5f1d 460 Gene3D G3DSA:3.20.20.140 6 446 1.1E-141 T 11-10-2018 ATC04_11830 832fe82ba4ce130bba66f2a9d008fbad 291 Gene3D G3DSA:3.40.50.150 95 289 4.9E-48 T 11-10-2018 ATC04_11830 832fe82ba4ce130bba66f2a9d008fbad 291 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 10 289 37.597 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ATC04_11830 832fe82ba4ce130bba66f2a9d008fbad 291 Gene3D G3DSA:1.10.8.10 9 94 2.5E-18 T 11-10-2018 ATC04_11830 832fe82ba4ce130bba66f2a9d008fbad 291 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 28 288 6.8E-47 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 ATC04_11830 832fe82ba4ce130bba66f2a9d008fbad 291 Pfam PF05175 Methyltransferase small domain 92 199 5.7E-12 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ATC04_11830 832fe82ba4ce130bba66f2a9d008fbad 291 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 32 285 2.0E-70 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ATC04_11830 832fe82ba4ce130bba66f2a9d008fbad 291 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 193 199 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ATC04_11830 832fe82ba4ce130bba66f2a9d008fbad 291 SUPERFAMILY SSF53335 15 285 4.84E-48 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_12370 47663f5fe709e83f02c51b98838ee294 328 Gene3D G3DSA:1.10.443.10 139 321 5.6E-64 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ATC04_12370 47663f5fe709e83f02c51b98838ee294 328 SUPERFAMILY SSF56349 136 325 5.89E-57 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATC04_12370 47663f5fe709e83f02c51b98838ee294 328 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 32 326 1.5E-104 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 ATC04_12370 47663f5fe709e83f02c51b98838ee294 328 Gene3D G3DSA:1.10.150.130 25 136 1.5E-18 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal ATC04_12370 47663f5fe709e83f02c51b98838ee294 328 Pfam PF00589 Phage integrase family 144 312 5.1E-46 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATC04_12370 47663f5fe709e83f02c51b98838ee294 328 SUPERFAMILY SSF47823 30 126 2.94E-14 T 11-10-2018 ATC04_12370 47663f5fe709e83f02c51b98838ee294 328 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 28 327 54.436 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD ATC04_12370 47663f5fe709e83f02c51b98838ee294 328 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 30 115 3.5E-17 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ATC04_12370 47663f5fe709e83f02c51b98838ee294 328 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 26 327 53.852 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 ATC04_15325 6d71c10df3f61ac35a2ac602c5815715 203 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 116 197 3.4E-12 T 11-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain ATC04_15325 6d71c10df3f61ac35a2ac602c5815715 203 Gene3D G3DSA:3.30.70.2390 114 195 4.1E-11 T 11-10-2018 ATC04_13625 4343123d40f3af275ae19fe0933a206c 409 Gene3D G3DSA:3.20.20.140 11 390 9.7E-115 T 11-10-2018 ATC04_13625 4343123d40f3af275ae19fe0933a206c 409 SUPERFAMILY SSF51556 9 340 6.09E-60 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_13625 4343123d40f3af275ae19fe0933a206c 409 Gene3D G3DSA:2.30.40.10 6 386 9.7E-115 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_13625 4343123d40f3af275ae19fe0933a206c 409 SUPERFAMILY SSF51338 322 393 7.12E-5 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_13625 4343123d40f3af275ae19fe0933a206c 409 Pfam PF01979 Amidohydrolase family 8 341 1.8E-26 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ATC04_08950 ec3b6b1f6b46124990d59fcb8578f4e8 286 Pfam PF00106 short chain dehydrogenase 8 203 4.8E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08950 ec3b6b1f6b46124990d59fcb8578f4e8 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08950 ec3b6b1f6b46124990d59fcb8578f4e8 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 2.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08950 ec3b6b1f6b46124990d59fcb8578f4e8 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08950 ec3b6b1f6b46124990d59fcb8578f4e8 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 2.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08950 ec3b6b1f6b46124990d59fcb8578f4e8 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 2.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08950 ec3b6b1f6b46124990d59fcb8578f4e8 286 SUPERFAMILY SSF51735 5 248 5.0E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_08950 ec3b6b1f6b46124990d59fcb8578f4e8 286 Gene3D G3DSA:3.40.50.720 5 257 1.0E-50 T 11-10-2018 ATC04_08950 ec3b6b1f6b46124990d59fcb8578f4e8 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 1.5E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08950 ec3b6b1f6b46124990d59fcb8578f4e8 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.5E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08950 ec3b6b1f6b46124990d59fcb8578f4e8 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 1.5E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08810 652ae180acaf6e1ef7563743217826ee 283 Gene3D G3DSA:3.40.50.720 3 190 1.4E-50 T 11-10-2018 ATC04_08810 652ae180acaf6e1ef7563743217826ee 283 Gene3D G3DSA:1.10.1040.10 191 283 1.2E-22 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATC04_08810 652ae180acaf6e1ef7563743217826ee 283 SUPERFAMILY SSF48179 188 283 4.25E-19 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_08810 652ae180acaf6e1ef7563743217826ee 283 PIRSF PIRSF000105 1 283 1.8E-73 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 ATC04_08810 652ae180acaf6e1ef7563743217826ee 283 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 186 1.4E-40 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ATC04_08810 652ae180acaf6e1ef7563743217826ee 283 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 282 1.1E-20 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ATC04_08810 652ae180acaf6e1ef7563743217826ee 283 SUPERFAMILY SSF51735 5 183 2.31E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_00475 4d3104f2e60f80b7d1afeab2c031267d 240 Pfam PF03466 LysR substrate binding domain 16 88 1.3E-9 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_00475 4d3104f2e60f80b7d1afeab2c031267d 240 Gene3D G3DSA:3.40.190.10 158 178 1.4E-5 T 11-10-2018 ATC04_00475 4d3104f2e60f80b7d1afeab2c031267d 240 Gene3D G3DSA:3.40.190.10 112 157 1.4E-5 T 11-10-2018 ATC04_00475 4d3104f2e60f80b7d1afeab2c031267d 240 Gene3D G3DSA:3.40.190.10 4 94 3.1E-9 T 11-10-2018 ATC04_00475 4d3104f2e60f80b7d1afeab2c031267d 240 SUPERFAMILY SSF53850 16 186 4.98E-16 T 11-10-2018 ATC04_13990 a4ec118f447390a453c03fb4b8780be6 166 SUPERFAMILY SSF48452 42 139 6.64E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_13990 a4ec118f447390a453c03fb4b8780be6 166 Gene3D G3DSA:1.25.40.10 51 147 1.4E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_13990 a4ec118f447390a453c03fb4b8780be6 166 Pfam PF12688 Tetratrico peptide repeat 40 157 7.5E-24 T 11-10-2018 ATC04_05265 7efeeba10027e1099ceecacc65aa1931 268 Gene3D G3DSA:3.40.50.1000 21 232 9.4E-59 T 11-10-2018 IPR023214 HAD superfamily ATC04_05265 7efeeba10027e1099ceecacc65aa1931 268 SUPERFAMILY SSF56784 17 236 1.73E-25 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_05265 7efeeba10027e1099ceecacc65aa1931 268 Pfam PF12710 haloacid dehalogenase-like hydrolase 21 207 5.1E-25 T 11-10-2018 ATC04_05265 7efeeba10027e1099ceecacc65aa1931 268 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 20 220 6.3E-48 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like ATC04_05265 7efeeba10027e1099ceecacc65aa1931 268 Gene3D G3DSA:1.20.1440.100 32 107 9.4E-59 T 11-10-2018 ATC04_05265 7efeeba10027e1099ceecacc65aa1931 268 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 20 209 8.6E-15 T 11-10-2018 ATC04_16045 4d9fcd2e417154a26d463e248a707f37 401 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ATC04_16045 4d9fcd2e417154a26d463e248a707f37 401 Pfam PF02803 Thiolase, C-terminal domain 278 397 3.1E-42 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ATC04_16045 4d9fcd2e417154a26d463e248a707f37 401 SUPERFAMILY SSF53901 278 398 5.47E-38 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_16045 4d9fcd2e417154a26d463e248a707f37 401 Gene3D G3DSA:3.40.47.10 7 282 2.0E-133 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_16045 4d9fcd2e417154a26d463e248a707f37 401 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 ATC04_16045 4d9fcd2e417154a26d463e248a707f37 401 Gene3D G3DSA:3.40.47.10 142 396 2.0E-133 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_16045 4d9fcd2e417154a26d463e248a707f37 401 PIRSF PIRSF000429 1 400 8.9E-123 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_16045 4d9fcd2e417154a26d463e248a707f37 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 397 2.6E-127 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_16045 4d9fcd2e417154a26d463e248a707f37 401 SUPERFAMILY SSF53901 4 269 4.76E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_16045 4d9fcd2e417154a26d463e248a707f37 401 Pfam PF00108 Thiolase, N-terminal domain 8 268 2.1E-63 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ATC04_13355 e4eb3b5862fa30b242bca49dc2c1ae49 278 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 4 277 1.9E-77 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATC04_13355 e4eb3b5862fa30b242bca49dc2c1ae49 278 SUPERFAMILY SSF46934 3 56 2.14E-15 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 ATC04_13355 e4eb3b5862fa30b242bca49dc2c1ae49 278 Gene3D G3DSA:1.10.8.10 1 55 2.7E-22 T 11-10-2018 ATC04_13355 e4eb3b5862fa30b242bca49dc2c1ae49 278 Pfam PF00889 Elongation factor TS 71 277 5.7E-63 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 ATC04_13355 e4eb3b5862fa30b242bca49dc2c1ae49 278 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATC04_13355 e4eb3b5862fa30b242bca49dc2c1ae49 278 Gene3D G3DSA:3.30.479.20 162 277 1.2E-33 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ATC04_13355 e4eb3b5862fa30b242bca49dc2c1ae49 278 Hamap MF_00050 Elongation factor Ts [tsf]. 1 278 64.351 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATC04_13355 e4eb3b5862fa30b242bca49dc2c1ae49 278 SUPERFAMILY SSF54713 57 277 5.31E-42 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ATC04_13355 e4eb3b5862fa30b242bca49dc2c1ae49 278 Gene3D G3DSA:3.30.479.20 57 147 1.0E-23 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ATC04_13355 e4eb3b5862fa30b242bca49dc2c1ae49 278 Gene3D G3DSA:1.10.286.20 197 243 1.2E-33 T 11-10-2018 ATC04_13355 e4eb3b5862fa30b242bca49dc2c1ae49 278 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATC04_08425 42d90b67d60756df39c11b6064b653c3 157 PIRSF PIRSF005384 1 153 4.7E-45 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ATC04_08425 42d90b67d60756df39c11b6064b653c3 157 SUPERFAMILY SSF89623 1 153 4.05E-48 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ATC04_08425 42d90b67d60756df39c11b6064b653c3 157 TIGRFAM TIGR02133 RPI_actino: ribose 5-phosphate isomerase 1 152 4.0E-60 T 11-10-2018 IPR011860 Ribose 5-phosphate isomerase GO:0004751 ATC04_08425 42d90b67d60756df39c11b6064b653c3 157 Pfam PF02502 Ribose/Galactose Isomerase 3 146 5.0E-43 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ATC04_08425 42d90b67d60756df39c11b6064b653c3 157 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 151 1.2E-48 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ATC04_08425 42d90b67d60756df39c11b6064b653c3 157 Gene3D G3DSA:3.40.1400.10 1 156 2.7E-54 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ATC04_17930 ec7b2531dd13c51ca81d80cccac6307a 268 Gene3D G3DSA:1.10.10.1320 2 72 1.0E-9 T 11-10-2018 ATC04_17930 ec7b2531dd13c51ca81d80cccac6307a 268 Pfam PF10099 Anti-sigma-K factor rskA 58 266 2.0E-27 T 11-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 ATC04_00555 46350246847b88668ed213f384d38be1 255 SUPERFAMILY SSF63817 46 234 3.14E-29 T 11-10-2018 IPR023365 Sortase domain superfamily ATC04_00555 46350246847b88668ed213f384d38be1 255 Pfam PF04203 Sortase family 112 232 5.0E-29 T 11-10-2018 IPR005754 Sortase family ATC04_00555 46350246847b88668ed213f384d38be1 255 Gene3D G3DSA:2.40.260.10 45 247 1.8E-48 T 11-10-2018 IPR023365 Sortase domain superfamily ATC04_00555 46350246847b88668ed213f384d38be1 255 TIGRFAM TIGR01076 sortase_fam: sortase 112 230 2.3E-16 T 11-10-2018 IPR005754 Sortase family ATC04_16525 049b17aebef68b908cd715abe66170d8 83 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 11 70 7.0E-24 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ATC04_16525 049b17aebef68b908cd715abe66170d8 83 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 4 75 8.0E-26 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ATC04_16525 049b17aebef68b908cd715abe66170d8 83 SUPERFAMILY SSF82697 4 74 1.92E-22 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATC04_16525 049b17aebef68b908cd715abe66170d8 83 Gene3D G3DSA:3.30.1280.10 3 83 3.8E-24 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATC04_16525 049b17aebef68b908cd715abe66170d8 83 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 79 19.388 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ATC04_16525 049b17aebef68b908cd715abe66170d8 83 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 6 74 3.6E-16 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ATC04_14635 113ff425eb7968bfee6949f8cd46488f 438 Gene3D G3DSA:3.90.1150.10 295 438 1.8E-39 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_14635 113ff425eb7968bfee6949f8cd46488f 438 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 425 7.8E-116 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_14635 113ff425eb7968bfee6949f8cd46488f 438 Gene3D G3DSA:3.40.640.10 9 291 3.3E-88 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_14635 113ff425eb7968bfee6949f8cd46488f 438 SUPERFAMILY SSF53383 11 426 1.61E-100 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_14635 113ff425eb7968bfee6949f8cd46488f 438 PIRSF PIRSF001434 1 429 3.2E-117 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 Pfam PF09269 Domain of unknown function (DUF1967) 378 446 7.0E-22 T 11-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 342 1.0E-119 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 Gene3D G3DSA:3.40.50.300 160 378 5.9E-50 T 11-10-2018 ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 Gene3D G3DSA:2.70.210.12 1 158 2.2E-48 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 371 447 4.4E-25 T 11-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.8E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.8E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 2.8E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 2.8E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 Gene3D G3DSA:2.40.240.60 379 449 2.1E-16 T 11-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 Hamap MF_01454 GTPase Obg [obg]. 3 343 43.129 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 SUPERFAMILY SSF52540 161 346 7.99E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 SUPERFAMILY SSF102741 370 448 8.76E-18 T 11-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 Pfam PF01926 50S ribosome-binding GTPase 161 286 1.7E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 SUPERFAMILY SSF82051 4 157 6.54E-45 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily ATC04_08655 3081feec7ad5c5e4f5694ca802bdce6a 527 Pfam PF01018 GTP1/OBG 5 157 1.3E-48 T 11-10-2018 IPR006169 GTP1/OBG domain ATC04_04560 26d1c806ca61d59b387a3ee9fae311ff 197 Gene3D G3DSA:1.10.357.10 1 190 5.9E-50 T 11-10-2018 ATC04_04560 26d1c806ca61d59b387a3ee9fae311ff 197 SUPERFAMILY SSF48498 80 192 1.6E-17 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_04560 26d1c806ca61d59b387a3ee9fae311ff 197 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 84 190 1.4E-10 T 11-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal ATC04_04560 26d1c806ca61d59b387a3ee9fae311ff 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 2.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_04560 26d1c806ca61d59b387a3ee9fae311ff 197 SUPERFAMILY SSF46689 3 73 1.18E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_06700 53109ab99f8f2d9befe74bde50226ed2 351 Gene3D G3DSA:1.50.10.150 11 342 2.5E-16 T 11-10-2018 IPR038665 Voltage-dependent anion channel superfamily ATC04_06700 53109ab99f8f2d9befe74bde50226ed2 351 Pfam PF03595 Voltage-dependent anion channel 16 335 5.4E-45 T 11-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 ATC04_07215 a5774ef355b5073b9f5d9f3894a741ef 567 Pfam PF10646 Sporulation and spore germination 177 288 1.1E-11 T 11-10-2018 IPR019606 GerMN domain ATC04_07215 a5774ef355b5073b9f5d9f3894a741ef 567 SMART SM00909 202 293 5.0E-6 T 11-10-2018 IPR019606 GerMN domain ATC04_07215 a5774ef355b5073b9f5d9f3894a741ef 567 Pfam PF10647 Lipoprotein LpqB beta-propeller domain 318 556 1.2E-38 T 11-10-2018 IPR018910 Lipoprotein LpqB, beta-propeller domain, C-terminal ATC04_02585 2c6e2419c551d781f59d600c9adf323f 378 Gene3D G3DSA:2.40.110.10 129 228 2.4E-9 T 11-10-2018 ATC04_02585 2c6e2419c551d781f59d600c9adf323f 378 Gene3D G3DSA:1.10.540.10 15 128 2.7E-12 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_02585 2c6e2419c551d781f59d600c9adf323f 378 Gene3D G3DSA:1.20.140.10 229 376 3.4E-21 T 11-10-2018 ATC04_02585 2c6e2419c551d781f59d600c9adf323f 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 361 1.6E-15 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_02585 2c6e2419c551d781f59d600c9adf323f 378 SUPERFAMILY SSF56645 14 222 1.55E-19 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_02585 2c6e2419c551d781f59d600c9adf323f 378 SUPERFAMILY SSF47203 240 373 1.93E-22 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_02580 e07e0b003c1fdb147793d7eef1fb4584 393 SUPERFAMILY SSF47203 229 389 8.86E-25 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_02580 e07e0b003c1fdb147793d7eef1fb4584 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 382 3.3E-33 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_02580 e07e0b003c1fdb147793d7eef1fb4584 393 Gene3D G3DSA:2.40.110.10 124 232 2.4E-36 T 11-10-2018 ATC04_02580 e07e0b003c1fdb147793d7eef1fb4584 393 SUPERFAMILY SSF56645 6 242 7.33E-67 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_02580 e07e0b003c1fdb147793d7eef1fb4584 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 212 4.7E-21 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_02580 e07e0b003c1fdb147793d7eef1fb4584 393 Gene3D G3DSA:1.20.140.10 233 393 3.3E-36 T 11-10-2018 ATC04_02580 e07e0b003c1fdb147793d7eef1fb4584 393 Gene3D G3DSA:1.10.540.10 2 119 1.8E-28 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_02580 e07e0b003c1fdb147793d7eef1fb4584 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 120 8.4E-21 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR01159 DNA gyrase subunit B signature 653 665 4.3E-29 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR01159 DNA gyrase subunit B signature 219 232 4.3E-29 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR01159 DNA gyrase subunit B signature 669 685 4.3E-29 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR01159 DNA gyrase subunit B signature 7 17 4.3E-29 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR01159 DNA gyrase subunit B signature 293 311 4.3E-29 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR01159 DNA gyrase subunit B signature 431 451 4.3E-29 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR01159 DNA gyrase subunit B signature 527 536 4.3E-29 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR01159 DNA gyrase subunit B signature 365 381 4.3E-29 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 SMART SM00433 36 693 1.5E-254 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 631 688 4.1E-25 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 Gene3D G3DSA:3.30.230.10 252 449 1.7E-45 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 Gene3D G3DSA:3.40.50.670 455 702 2.4E-89 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 SUPERFAMILY SSF54211 253 447 4.17E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 ProSitePatterns PS00177 DNA topoisomerase II signature. 479 487 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 SMART SM00387 32 198 2.3E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 Pfam PF01751 Toprim domain 476 585 8.2E-16 T 11-10-2018 IPR006171 TOPRIM domain ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 137 1.1E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR00418 DNA topoisomerase II family signature 561 578 1.0E-61 T 11-10-2018 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR00418 DNA topoisomerase II family signature 114 128 1.0E-61 T 11-10-2018 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR00418 DNA topoisomerase II family signature 319 332 1.0E-61 T 11-10-2018 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR00418 DNA topoisomerase II family signature 71 84 1.0E-61 T 11-10-2018 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR00418 DNA topoisomerase II family signature 36 51 1.0E-61 T 11-10-2018 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR00418 DNA topoisomerase II family signature 477 491 1.0E-61 T 11-10-2018 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR00418 DNA topoisomerase II family signature 581 593 1.0E-61 T 11-10-2018 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR00418 DNA topoisomerase II family signature 632 648 1.0E-61 T 11-10-2018 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 PRINTS PR00418 DNA topoisomerase II family signature 543 559 1.0E-61 T 11-10-2018 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 Gene3D G3DSA:3.30.565.10 14 234 2.1E-80 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 Pfam PF00204 DNA gyrase B 253 447 4.9E-49 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 SUPERFAMILY SSF56719 451 695 2.3E-76 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ATC04_07520 91df7a7903c41ca576587d4a7c207c3b 702 SUPERFAMILY SSF55874 7 232 1.17E-56 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_05185 2819521a5cccbc56725e303b948424a6 218 Pfam PF13673 Acetyltransferase (GNAT) domain 134 215 4.1E-6 T 11-10-2018 IPR000182 GNAT domain ATC04_05185 2819521a5cccbc56725e303b948424a6 218 SUPERFAMILY SSF55729 102 215 7.77E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_05185 2819521a5cccbc56725e303b948424a6 218 Gene3D G3DSA:3.40.630.30 12 217 5.0E-14 T 11-10-2018 ATC04_03430 e2aeee187450387d0cb19887068a9c4e 265 Gene3D G3DSA:1.10.3720.10 57 259 3.6E-23 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_03430 e2aeee187450387d0cb19887068a9c4e 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 259 6.0E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_03430 e2aeee187450387d0cb19887068a9c4e 265 SUPERFAMILY SSF161098 62 248 1.96E-28 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_13330 e9242d9477f23b0278d22327867f90d7 474 Pfam PF00474 Sodium:solute symporter family 17 403 6.3E-45 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ATC04_13330 e9242d9477f23b0278d22327867f90d7 474 Gene3D G3DSA:1.20.1730.10 7 467 4.1E-47 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily ATC04_15910 a2ccc12864f9a4cf024180f090d03ba0 232 Pfam PF02613 Nitrate reductase delta subunit 63 183 8.6E-14 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone ATC04_15910 a2ccc12864f9a4cf024180f090d03ba0 232 Gene3D G3DSA:1.10.3480.10 23 186 2.1E-8 T 11-10-2018 ATC04_15910 a2ccc12864f9a4cf024180f090d03ba0 232 SUPERFAMILY SSF89155 29 189 1.83E-26 T 11-10-2018 IPR036411 TorD-like superfamily ATC04_15910 a2ccc12864f9a4cf024180f090d03ba0 232 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 37 185 1.1E-34 T 11-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 ATC04_04055 78b0635e1601de9195b86af38d7af1ca 230 SUPERFAMILY SSF52799 4 226 1.98E-29 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like ATC04_04055 78b0635e1601de9195b86af38d7af1ca 230 Gene3D G3DSA:3.90.190.10 2 227 6.2E-39 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like ATC04_04055 78b0635e1601de9195b86af38d7af1ca 230 Pfam PF13350 Tyrosine phosphatase family 3 227 1.4E-40 T 11-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type ATC04_04055 78b0635e1601de9195b86af38d7af1ca 230 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 119 129 - T 11-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 ATC04_13035 c761ec3d07b69cdde1349cb422f3bd03 317 SUPERFAMILY SSF52374 17 174 9.7E-30 T 11-10-2018 ATC04_13035 c761ec3d07b69cdde1349cb422f3bd03 317 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 312 2.3E-68 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ATC04_13035 c761ec3d07b69cdde1349cb422f3bd03 317 SUPERFAMILY SSF82114 173 313 5.23E-39 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 ATC04_13035 c761ec3d07b69cdde1349cb422f3bd03 317 Pfam PF01687 Riboflavin kinase 183 312 3.0E-34 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 ATC04_13035 c761ec3d07b69cdde1349cb422f3bd03 317 PIRSF PIRSF004491 2 317 1.7E-94 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ATC04_13035 c761ec3d07b69cdde1349cb422f3bd03 317 SMART SM00904 182 313 3.6E-54 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 ATC04_13035 c761ec3d07b69cdde1349cb422f3bd03 317 Pfam PF06574 FAD synthetase 15 165 9.3E-49 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ATC04_13035 c761ec3d07b69cdde1349cb422f3bd03 317 Gene3D G3DSA:3.40.50.620 1 184 1.1E-60 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_13035 c761ec3d07b69cdde1349cb422f3bd03 317 Gene3D G3DSA:2.40.30.30 185 317 3.2E-41 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 ATC04_08080 33110e491903f412d3c14c6d253002ed 163 Pfam PF00583 Acetyltransferase (GNAT) family 40 133 3.7E-18 T 11-10-2018 IPR000182 GNAT domain ATC04_08080 33110e491903f412d3c14c6d253002ed 163 SUPERFAMILY SSF55729 3 136 1.86E-35 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_08080 33110e491903f412d3c14c6d253002ed 163 Gene3D G3DSA:3.40.630.30 2 161 9.4E-51 T 11-10-2018 ATC04_02610 035b6f8a6c21bf1957a926b84101a690 132 SUPERFAMILY SSF54637 3 128 3.46E-19 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_02610 035b6f8a6c21bf1957a926b84101a690 132 Pfam PF01575 MaoC like domain 9 106 5.6E-9 T 11-10-2018 IPR002539 MaoC-like dehydratase domain ATC04_02610 035b6f8a6c21bf1957a926b84101a690 132 Gene3D G3DSA:3.10.129.10 1 125 6.1E-31 T 11-10-2018 ATC04_16340 479f836ab86682af5df1170eec73b24d 224 SUPERFAMILY SSF52540 20 203 8.89E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16340 479f836ab86682af5df1170eec73b24d 224 Pfam PF02223 Thymidylate kinase 102 198 5.3E-9 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 ATC04_16340 479f836ab86682af5df1170eec73b24d 224 Gene3D G3DSA:3.40.50.300 19 206 2.1E-24 T 11-10-2018 ATC04_08455 37ae45845bf8c8f6dfccbcd5859d3e61 197 SUPERFAMILY SSF52096 12 184 2.45E-61 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_08455 37ae45845bf8c8f6dfccbcd5859d3e61 197 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 105 118 - T 11-10-2018 IPR033135 ClpP, histidine active site ATC04_08455 37ae45845bf8c8f6dfccbcd5859d3e61 197 PRINTS PR00127 Clp protease catalytic subunit P signature 12 27 8.9E-44 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATC04_08455 37ae45845bf8c8f6dfccbcd5859d3e61 197 PRINTS PR00127 Clp protease catalytic subunit P signature 52 72 8.9E-44 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATC04_08455 37ae45845bf8c8f6dfccbcd5859d3e61 197 PRINTS PR00127 Clp protease catalytic subunit P signature 104 123 8.9E-44 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATC04_08455 37ae45845bf8c8f6dfccbcd5859d3e61 197 PRINTS PR00127 Clp protease catalytic subunit P signature 83 100 8.9E-44 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATC04_08455 37ae45845bf8c8f6dfccbcd5859d3e61 197 PRINTS PR00127 Clp protease catalytic subunit P signature 161 180 8.9E-44 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATC04_08455 37ae45845bf8c8f6dfccbcd5859d3e61 197 Pfam PF00574 Clp protease 11 184 4.1E-73 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ATC04_08455 37ae45845bf8c8f6dfccbcd5859d3e61 197 Gene3D G3DSA:3.90.226.10 2 187 2.2E-68 T 11-10-2018 ATC04_08455 37ae45845bf8c8f6dfccbcd5859d3e61 197 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 186 36.724 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 SUPERFAMILY SSF55681 2 252 2.98E-82 T 11-10-2018 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 Gene3D G3DSA:2.40.30.130 491 569 4.3E-9 T 11-10-2018 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 Gene3D G3DSA:3.30.930.10 1 249 4.6E-92 T 11-10-2018 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 670 714 1.8E-13 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 SUPERFAMILY SSF55186 569 724 8.37E-40 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 Gene3D G3DSA:3.30.980.10 580 715 3.7E-39 T 11-10-2018 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 SUPERFAMILY SSF101353 253 476 2.35E-51 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 876 1.5E-247 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 SUPERFAMILY SSF50447 472 569 7.42E-15 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 Pfam PF02272 DHHA1 domain 751 893 1.7E-20 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 Pfam PF01411 tRNA synthetases class II (A) 5 571 9.3E-182 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 896 158.965 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 PRINTS PR00980 Alanyl-tRNA synthetase signature 314 327 9.1E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 PRINTS PR00980 Alanyl-tRNA synthetase signature 69 80 9.1E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 PRINTS PR00980 Alanyl-tRNA synthetase signature 200 211 9.1E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 PRINTS PR00980 Alanyl-tRNA synthetase signature 290 306 9.1E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 PRINTS PR00980 Alanyl-tRNA synthetase signature 233 246 9.1E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 SMART SM00863 670 714 3.2E-16 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 Gene3D G3DSA:3.30.54.20 641 695 3.7E-39 T 11-10-2018 ATC04_09205 5e922b31dc3094fcfc6b42a1f0b748cc 896 Gene3D G3DSA:3.10.310.40 782 894 5.1E-21 T 11-10-2018 ATC04_14795 a9d0e9b7f4025421c269a63dfa3e1bfc 197 SUPERFAMILY SSF53041 2 140 3.92E-42 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ATC04_14795 a9d0e9b7f4025421c269a63dfa3e1bfc 197 Pfam PF00239 Resolvase, N terminal domain 4 140 3.3E-41 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_14795 a9d0e9b7f4025421c269a63dfa3e1bfc 197 SMART SM00857 3 141 4.3E-49 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_14795 a9d0e9b7f4025421c269a63dfa3e1bfc 197 Gene3D G3DSA:3.40.50.1390 3 130 1.3E-40 T 11-10-2018 ATC04_14795 a9d0e9b7f4025421c269a63dfa3e1bfc 197 ProSitePatterns PS00398 Site-specific recombinases signature 2. 60 72 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_08840 389d42cd8add3fe95b96d5e75df8eb9b 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 317 1.0E-29 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ATC04_08840 389d42cd8add3fe95b96d5e75df8eb9b 574 SUPERFAMILY SSF52518 357 558 1.33E-57 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_08840 389d42cd8add3fe95b96d5e75df8eb9b 574 SUPERFAMILY SSF52518 2 169 4.76E-44 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_08840 389d42cd8add3fe95b96d5e75df8eb9b 574 SUPERFAMILY SSF52467 180 350 1.33E-42 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ATC04_08840 389d42cd8add3fe95b96d5e75df8eb9b 574 Gene3D G3DSA:3.40.50.1220 178 331 8.8E-48 T 11-10-2018 ATC04_08840 389d42cd8add3fe95b96d5e75df8eb9b 574 Gene3D G3DSA:3.40.50.970 350 572 2.3E-66 T 11-10-2018 ATC04_08840 389d42cd8add3fe95b96d5e75df8eb9b 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 168 6.6E-44 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ATC04_08840 389d42cd8add3fe95b96d5e75df8eb9b 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 7.6E-37 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ATC04_08840 389d42cd8add3fe95b96d5e75df8eb9b 574 Gene3D G3DSA:3.40.50.970 2 177 2.0E-57 T 11-10-2018 ATC04_03885 6c6249c8984a1a461c1d3ef1b0b818c1 140 Pfam PF02261 Aspartate decarboxylase 1 114 5.1E-50 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ATC04_03885 6c6249c8984a1a461c1d3ef1b0b818c1 140 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 72.109 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ATC04_03885 6c6249c8984a1a461c1d3ef1b0b818c1 140 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 119 4.8E-48 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ATC04_03885 6c6249c8984a1a461c1d3ef1b0b818c1 140 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 114 2.0E-41 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ATC04_03885 6c6249c8984a1a461c1d3ef1b0b818c1 140 PIRSF PIRSF006246 1 131 3.0E-50 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ATC04_03885 6c6249c8984a1a461c1d3ef1b0b818c1 140 Gene3D G3DSA:2.40.40.20 1 125 1.1E-51 T 11-10-2018 ATC04_03885 6c6249c8984a1a461c1d3ef1b0b818c1 140 SUPERFAMILY SSF50692 1 116 5.47E-47 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ATC04_13345 d00c817ec84892c094bf172fa3dc4d66 185 SUPERFAMILY SSF55194 3 184 8.11E-63 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 ATC04_13345 d00c817ec84892c094bf172fa3dc4d66 185 Gene3D G3DSA:3.30.1360.40 31 105 5.8E-60 T 11-10-2018 ATC04_13345 d00c817ec84892c094bf172fa3dc4d66 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 25.737 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 ATC04_13345 d00c817ec84892c094bf172fa3dc4d66 185 Gene3D G3DSA:1.10.132.20 12 182 5.8E-60 T 11-10-2018 ATC04_13345 d00c817ec84892c094bf172fa3dc4d66 185 Pfam PF01765 Ribosome recycling factor 21 183 9.2E-55 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 ATC04_13345 d00c817ec84892c094bf172fa3dc4d66 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.5E-59 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 ATC04_06990 ee6b4df710626159a82ffb6e095b7e73 1066 Gene3D G3DSA:3.40.50.300 345 705 1.4E-24 T 11-10-2018 ATC04_06990 ee6b4df710626159a82ffb6e095b7e73 1066 SUPERFAMILY SSF52540 22 702 1.73E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06990 ee6b4df710626159a82ffb6e095b7e73 1066 Pfam PF00580 UvrD/REP helicase N-terminal domain 153 293 1.5E-12 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ATC04_06990 ee6b4df710626159a82ffb6e095b7e73 1066 Gene3D G3DSA:1.10.10.160 113 212 3.4E-32 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily ATC04_06990 ee6b4df710626159a82ffb6e095b7e73 1066 Pfam PF12705 PD-(D/E)XK nuclease superfamily 806 1054 9.6E-29 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type ATC04_06990 ee6b4df710626159a82ffb6e095b7e73 1066 Gene3D G3DSA:1.10.486.10 413 598 1.4E-24 T 11-10-2018 ATC04_06990 ee6b4df710626159a82ffb6e095b7e73 1066 Pfam PF13361 UvrD-like helicase C-terminal domain 348 693 8.5E-8 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ATC04_06990 ee6b4df710626159a82ffb6e095b7e73 1066 Gene3D G3DSA:3.40.50.300 22 294 3.4E-32 T 11-10-2018 ATC04_04800 3a0b3036a34885572d34ab99674a7ae0 578 Gene3D G3DSA:3.40.50.300 27 104 4.4E-12 T 11-10-2018 ATC04_04800 3a0b3036a34885572d34ab99674a7ae0 578 Gene3D G3DSA:3.40.50.300 220 401 3.0E-22 T 11-10-2018 ATC04_04800 3a0b3036a34885572d34ab99674a7ae0 578 SUPERFAMILY SSF52540 35 391 9.7E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_04800 3a0b3036a34885572d34ab99674a7ae0 578 Pfam PF05872 Bacterial protein of unknown function (DUF853) 33 577 1.2E-163 T 11-10-2018 IPR033186 Helicase HerA-like C-terminal ATC04_12230 4c4caf8ec7423beb90c5231498ba081f 237 SUPERFAMILY SSF46955 26 92 3.39E-14 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_12230 4c4caf8ec7423beb90c5231498ba081f 237 SMART SM00422 11 85 7.8E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_12230 4c4caf8ec7423beb90c5231498ba081f 237 Pfam PF00376 MerR family regulatory protein 12 53 4.3E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_12230 4c4caf8ec7423beb90c5231498ba081f 237 Gene3D G3DSA:1.10.1660.10 26 233 1.4E-19 T 11-10-2018 ATC04_15210 f4cb29e50b4b3bdb1811b59d705252cd 1116 SUPERFAMILY SSF52540 871 1115 1.8E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15210 f4cb29e50b4b3bdb1811b59d705252cd 1116 Pfam PF00176 SNF2 family N-terminal domain 657 934 4.3E-58 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 ATC04_15210 f4cb29e50b4b3bdb1811b59d705252cd 1116 Gene3D G3DSA:1.20.120.850 892 1111 1.4E-72 T 11-10-2018 ATC04_15210 f4cb29e50b4b3bdb1811b59d705252cd 1116 Gene3D G3DSA:3.40.50.300 878 1075 1.4E-72 T 11-10-2018 ATC04_15210 f4cb29e50b4b3bdb1811b59d705252cd 1116 SMART SM00490 981 1061 6.8E-22 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_15210 f4cb29e50b4b3bdb1811b59d705252cd 1116 Gene3D G3DSA:3.40.50.10810 624 871 2.8E-60 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily ATC04_15210 f4cb29e50b4b3bdb1811b59d705252cd 1116 Pfam PF00271 Helicase conserved C-terminal domain 953 1061 1.7E-16 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_15210 f4cb29e50b4b3bdb1811b59d705252cd 1116 SUPERFAMILY SSF52540 633 870 1.67E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15210 f4cb29e50b4b3bdb1811b59d705252cd 1116 SMART SM00487 640 850 1.3E-23 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_13445 64d2ff6375b5ac26b8f3e487b166ec22 261 Pfam PF11611 Domain of unknown function (DUF4352) 128 252 2.8E-6 T 11-10-2018 IPR029051 Domain of unknown function DUF4352 ATC04_13445 64d2ff6375b5ac26b8f3e487b166ec22 261 Gene3D G3DSA:2.60.40.1240 128 256 1.8E-7 T 11-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily ATC04_04645 f6fdd6f1c56a8bb803c68a238ed4b173 509 Gene3D G3DSA:1.10.10.2840 379 509 2.4E-8 T 11-10-2018 ATC04_04645 f6fdd6f1c56a8bb803c68a238ed4b173 509 Pfam PF13556 PucR C-terminal helix-turn-helix domain 447 503 1.4E-13 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ATC04_04645 f6fdd6f1c56a8bb803c68a238ed4b173 509 Pfam PF07905 Purine catabolism regulatory protein-like family 6 115 6.0E-17 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain ATC04_03890 5ba9d0a76c0b24b4d92f8499a8e8b158 516 Gene3D G3DSA:1.10.275.10 3 203 3.3E-64 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal ATC04_03890 5ba9d0a76c0b24b4d92f8499a8e8b158 516 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 9 510 2.3E-200 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATC04_03890 5ba9d0a76c0b24b4d92f8499a8e8b158 516 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 144 160 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 ATC04_03890 5ba9d0a76c0b24b4d92f8499a8e8b158 516 SUPERFAMILY SSF48557 5 506 8.63E-176 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 ATC04_03890 5ba9d0a76c0b24b4d92f8499a8e8b158 516 Pfam PF00221 Aromatic amino acid lyase 17 477 2.2E-177 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 ATC04_03890 5ba9d0a76c0b24b4d92f8499a8e8b158 516 Gene3D G3DSA:1.20.200.10 204 512 1.5E-111 T 11-10-2018 ATC04_02315 37b254582d73993c04c33752ed3e6069 552 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 297 3.6E-19 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ATC04_02315 37b254582d73993c04c33752ed3e6069 552 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 543 6.6E-35 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ATC04_02315 37b254582d73993c04c33752ed3e6069 552 SUPERFAMILY SSF52467 160 351 1.92E-29 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ATC04_02315 37b254582d73993c04c33752ed3e6069 552 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 175 2.0E-46 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ATC04_02315 37b254582d73993c04c33752ed3e6069 552 Gene3D G3DSA:3.40.50.970 372 551 1.3E-46 T 11-10-2018 ATC04_02315 37b254582d73993c04c33752ed3e6069 552 Gene3D G3DSA:3.40.50.970 2 181 1.9E-53 T 11-10-2018 ATC04_02315 37b254582d73993c04c33752ed3e6069 552 SUPERFAMILY SSF52518 376 548 2.58E-48 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_02315 37b254582d73993c04c33752ed3e6069 552 Gene3D G3DSA:3.40.50.1220 189 359 1.4E-26 T 11-10-2018 ATC04_02315 37b254582d73993c04c33752ed3e6069 552 SUPERFAMILY SSF52518 8 183 6.87E-46 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_03330 04d5b72a4fadc36951ca9c9803bd9faf 234 Gene3D G3DSA:3.40.1080.10 2 226 1.0E-77 T 11-10-2018 ATC04_03330 04d5b72a4fadc36951ca9c9803bd9faf 234 Pfam PF01144 Coenzyme A transferase 8 216 3.7E-64 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_03330 04d5b72a4fadc36951ca9c9803bd9faf 234 SUPERFAMILY SSF100950 10 225 2.44E-73 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_03330 04d5b72a4fadc36951ca9c9803bd9faf 234 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 19 34 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 ATC04_03330 04d5b72a4fadc36951ca9c9803bd9faf 234 SMART SM00882 6 217 4.1E-71 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_03330 04d5b72a4fadc36951ca9c9803bd9faf 234 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 3 218 1.5E-68 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 ATC04_04460 3d3751974a30101aefd8ed4fe512a867 296 SUPERFAMILY SSF53098 3 140 5.82E-40 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_04460 3d3751974a30101aefd8ed4fe512a867 296 Gene3D G3DSA:3.10.450.50 173 294 2.1E-5 T 11-10-2018 ATC04_04460 3d3751974a30101aefd8ed4fe512a867 296 Pfam PF00075 RNase H 6 138 6.1E-29 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 ATC04_04460 3d3751974a30101aefd8ed4fe512a867 296 Hamap MF_00042 Ribonuclease H [rnhA]. 1 147 25.485 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 ATC04_04460 3d3751974a30101aefd8ed4fe512a867 296 Gene3D G3DSA:3.30.420.10 1 149 1.1E-45 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_04460 3d3751974a30101aefd8ed4fe512a867 296 SUPERFAMILY SSF54427 184 293 8.77E-11 T 11-10-2018 IPR032710 NTF2-like domain superfamily ATC04_12520 f19ceb8872ec5b62a9dc4ddbb731a9e6 114 SUPERFAMILY SSF46785 16 105 1.18E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_12520 f19ceb8872ec5b62a9dc4ddbb731a9e6 114 Pfam PF03551 Transcriptional regulator PadR-like family 19 89 2.7E-21 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal ATC04_12520 f19ceb8872ec5b62a9dc4ddbb731a9e6 114 Gene3D G3DSA:1.10.10.10 4 114 2.3E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16170 aab9e32779d6f51a5595c940955d688f 275 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 111 2.3E-6 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ATC04_16170 aab9e32779d6f51a5595c940955d688f 275 SUPERFAMILY SSF57716 226 272 5.7E-10 T 11-10-2018 ATC04_16170 aab9e32779d6f51a5595c940955d688f 275 Gene3D G3DSA:1.10.8.50 135 272 1.1E-31 T 11-10-2018 ATC04_16170 aab9e32779d6f51a5595c940955d688f 275 SUPERFAMILY SSF81624 2 135 6.41E-19 T 11-10-2018 IPR035937 MutM-like, N-terminal ATC04_16170 aab9e32779d6f51a5595c940955d688f 275 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 134 196 1.2E-12 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ATC04_16170 aab9e32779d6f51a5595c940955d688f 275 Gene3D G3DSA:3.20.190.10 2 134 1.2E-20 T 11-10-2018 IPR035937 MutM-like, N-terminal ATC04_16170 aab9e32779d6f51a5595c940955d688f 275 SUPERFAMILY SSF46946 133 198 9.57E-21 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ATC04_16170 aab9e32779d6f51a5595c940955d688f 275 SMART SM01232 134 222 8.2E-25 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ATC04_16170 aab9e32779d6f51a5595c940955d688f 275 SMART SM00898 2 120 1.5E-13 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ATC04_02495 71643cec90d55304ae3e6ff50616d271 577 SUPERFAMILY SSF52540 325 570 1.2E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_02495 71643cec90d55304ae3e6ff50616d271 577 SUPERFAMILY SSF90123 6 320 3.79E-72 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_02495 71643cec90d55304ae3e6ff50616d271 577 Pfam PF00005 ABC transporter 351 498 6.3E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_02495 71643cec90d55304ae3e6ff50616d271 577 Gene3D G3DSA:3.40.50.300 319 573 4.8E-80 T 11-10-2018 ATC04_02495 71643cec90d55304ae3e6ff50616d271 577 SMART SM00382 360 561 1.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_02495 71643cec90d55304ae3e6ff50616d271 577 Gene3D G3DSA:1.20.1560.10 1 317 2.1E-84 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_02495 71643cec90d55304ae3e6ff50616d271 577 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_02495 71643cec90d55304ae3e6ff50616d271 577 Pfam PF00664 ABC transporter transmembrane region 18 288 3.9E-44 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ATC04_16765 1d611d49a35d2e6da8ecebd018786650 212 Pfam PF01522 Polysaccharide deacetylase 13 120 1.4E-32 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ATC04_16765 1d611d49a35d2e6da8ecebd018786650 212 SUPERFAMILY SSF88713 11 195 9.64E-60 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ATC04_16765 1d611d49a35d2e6da8ecebd018786650 212 Gene3D G3DSA:3.20.20.370 4 202 8.5E-64 T 11-10-2018 ATC04_00400 d05fd0d6088ff0f9af054d252e513012 468 ProSitePatterns PS00216 Sugar transport proteins signature 1. 320 337 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_00400 d05fd0d6088ff0f9af054d252e513012 468 PRINTS PR00171 Sugar transporter signature 25 35 1.5E-24 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 ATC04_00400 d05fd0d6088ff0f9af054d252e513012 468 PRINTS PR00171 Sugar transporter signature 395 407 1.5E-24 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 ATC04_00400 d05fd0d6088ff0f9af054d252e513012 468 PRINTS PR00171 Sugar transporter signature 372 393 1.5E-24 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 ATC04_00400 d05fd0d6088ff0f9af054d252e513012 468 PRINTS PR00171 Sugar transporter signature 108 127 1.5E-24 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 ATC04_00400 d05fd0d6088ff0f9af054d252e513012 468 PRINTS PR00171 Sugar transporter signature 276 286 1.5E-24 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 ATC04_00400 d05fd0d6088ff0f9af054d252e513012 468 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_00400 d05fd0d6088ff0f9af054d252e513012 468 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 11 465 4.8E-98 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 ATC04_00400 d05fd0d6088ff0f9af054d252e513012 468 SUPERFAMILY SSF103473 19 466 7.32E-69 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_00400 d05fd0d6088ff0f9af054d252e513012 468 Pfam PF00083 Sugar (and other) transporter 17 466 7.2E-101 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_00400 d05fd0d6088ff0f9af054d252e513012 468 Gene3D G3DSA:1.20.1250.20 9 468 1.9E-116 T 11-10-2018 ATC04_04735 30d1dc3ca29e4d9f1539d79c90a6ab96 203 Pfam PF09350 Domain of unknown function (DUF1992) 62 127 4.2E-10 T 11-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain ATC04_14525 badd791b75454ec0f4ce0b030f92767d 208 SMART SM00421 146 203 4.3E-24 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_14525 badd791b75454ec0f4ce0b030f92767d 208 SMART SM00448 4 114 1.5E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_14525 badd791b75454ec0f4ce0b030f92767d 208 SUPERFAMILY SSF46894 134 206 1.56E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_14525 badd791b75454ec0f4ce0b030f92767d 208 Gene3D G3DSA:3.40.50.12740 4 207 8.2E-67 T 11-10-2018 ATC04_14525 badd791b75454ec0f4ce0b030f92767d 208 SUPERFAMILY SSF52172 3 132 3.27E-33 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_14525 badd791b75454ec0f4ce0b030f92767d 208 Pfam PF00072 Response regulator receiver domain 6 114 4.9E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_14525 badd791b75454ec0f4ce0b030f92767d 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.1E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_14525 badd791b75454ec0f4ce0b030f92767d 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 9.9E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_14525 badd791b75454ec0f4ce0b030f92767d 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 9.9E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_14525 badd791b75454ec0f4ce0b030f92767d 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 9.9E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_08160 762402c1737feb903e92f9a9806e19fe 204 Pfam PF01569 PAP2 superfamily 77 187 2.3E-19 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATC04_08160 762402c1737feb903e92f9a9806e19fe 204 Gene3D G3DSA:1.20.144.10 1 202 9.6E-18 T 11-10-2018 ATC04_08160 762402c1737feb903e92f9a9806e19fe 204 SMART SM00014 72 181 1.1E-6 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATC04_08160 762402c1737feb903e92f9a9806e19fe 204 SUPERFAMILY SSF48317 14 190 9.03E-27 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 141 161 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 5.4E-36 T 11-10-2018 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 5.4E-36 T 11-10-2018 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 5.4E-36 T 11-10-2018 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 5.4E-36 T 11-10-2018 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 5.4E-36 T 11-10-2018 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 SUPERFAMILY SSF51905 6 310 1.76E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 Gene3D G3DSA:3.50.50.60 128 250 9.6E-116 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 300 2.5E-44 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 Gene3D G3DSA:3.50.50.60 12 310 9.6E-116 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 11 311 1.6E-118 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 45 60 5.5E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 5.5E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 134 146 5.5E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 201 217 5.5E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 11 33 5.5E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 5.5E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 5.5E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 274 292 5.5E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_00695 deaae05bfb9c876b2ae579b2e4124835 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 149 173 5.5E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_11000 8ca80e2b8341826a8f3c48ab86892602 875 Gene3D G3DSA:1.10.10.10 733 872 3.6E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_11000 8ca80e2b8341826a8f3c48ab86892602 875 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 825 841 4.3E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_11000 8ca80e2b8341826a8f3c48ab86892602 875 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 811 825 4.3E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_11000 8ca80e2b8341826a8f3c48ab86892602 875 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 841 853 4.3E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_11000 8ca80e2b8341826a8f3c48ab86892602 875 SUPERFAMILY SSF52540 30 227 1.28E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11000 8ca80e2b8341826a8f3c48ab86892602 875 Pfam PF00196 Bacterial regulatory proteins, luxR family 811 863 4.8E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_11000 8ca80e2b8341826a8f3c48ab86892602 875 SMART SM00421 808 865 4.5E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_11000 8ca80e2b8341826a8f3c48ab86892602 875 SUPERFAMILY SSF46894 807 864 2.99E-15 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_11000 8ca80e2b8341826a8f3c48ab86892602 875 Gene3D G3DSA:3.40.50.300 22 178 4.9E-5 T 11-10-2018 ATC04_10015 b37715dbb2b258eea73eeb3619dc05e9 366 Pfam PF06271 RDD family 209 343 2.4E-7 T 11-10-2018 IPR010432 RDD ATC04_10015 b37715dbb2b258eea73eeb3619dc05e9 366 Pfam PF04892 VanZ like family 50 186 3.4E-19 T 11-10-2018 IPR006976 VanZ-like ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 SUPERFAMILY SSF54292 213 319 1.04E-26 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 271 279 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 245 313 4.4E-12 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 116 135 4.3E-25 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 45 57 4.3E-25 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 201 4.3E-25 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 57 71 4.3E-25 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 35 45 4.3E-25 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 141 150 4.3E-25 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 81 95 4.3E-25 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 SUPERFAMILY SSF63380 10 105 3.59E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 Gene3D G3DSA:3.10.20.30 230 324 9.7E-23 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 Gene3D G3DSA:3.40.50.80 110 223 3.7E-26 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 SUPERFAMILY SSF52343 103 230 2.23E-28 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 Gene3D G3DSA:2.40.30.10 6 106 1.1E-25 T 11-10-2018 ATC04_12910 faf1cc01c1a95e4bf114f65a24db5310 324 Pfam PF00175 Oxidoreductase NAD-binding domain 117 207 5.8E-7 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ATC04_07775 3367e8df2f9e1919b8dd5223be046900 304 Gene3D G3DSA:3.40.250.10 3 155 3.2E-44 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_07775 3367e8df2f9e1919b8dd5223be046900 304 ProSitePatterns PS00683 Rhodanese C-terminal signature. 269 279 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 ATC04_07775 3367e8df2f9e1919b8dd5223be046900 304 SMART SM00450 158 285 6.4E-20 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_07775 3367e8df2f9e1919b8dd5223be046900 304 SMART SM00450 21 135 1.5E-17 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_07775 3367e8df2f9e1919b8dd5223be046900 304 SUPERFAMILY SSF52821 14 152 1.23E-35 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_07775 3367e8df2f9e1919b8dd5223be046900 304 Gene3D G3DSA:3.40.250.10 157 300 5.5E-42 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_07775 3367e8df2f9e1919b8dd5223be046900 304 Pfam PF00581 Rhodanese-like domain 167 281 4.3E-17 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_07775 3367e8df2f9e1919b8dd5223be046900 304 Pfam PF00581 Rhodanese-like domain 23 131 1.4E-11 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_07775 3367e8df2f9e1919b8dd5223be046900 304 SUPERFAMILY SSF52821 164 290 2.36E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_07775 3367e8df2f9e1919b8dd5223be046900 304 ProSitePatterns PS00380 Rhodanese signature 1. 47 58 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 ATC04_17725 4bc33f5b66a724ba45a90fe886570abe 109 Pfam PF06114 IrrE N-terminal-like domain 7 90 1.3E-4 T 11-10-2018 IPR010359 IrrE N-terminal-like domain ATC04_00095 4bc33f5b66a724ba45a90fe886570abe 109 Pfam PF06114 IrrE N-terminal-like domain 7 90 1.3E-4 T 11-10-2018 IPR010359 IrrE N-terminal-like domain ATC04_08495 918453fd3c81952d894da2da3c2b69c1 255 Pfam PF00106 short chain dehydrogenase 13 189 6.6E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08495 918453fd3c81952d894da2da3c2b69c1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 5.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08495 918453fd3c81952d894da2da3c2b69c1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08495 918453fd3c81952d894da2da3c2b69c1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08495 918453fd3c81952d894da2da3c2b69c1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08495 918453fd3c81952d894da2da3c2b69c1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08495 918453fd3c81952d894da2da3c2b69c1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08495 918453fd3c81952d894da2da3c2b69c1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08495 918453fd3c81952d894da2da3c2b69c1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.6E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08495 918453fd3c81952d894da2da3c2b69c1 255 SUPERFAMILY SSF51735 10 230 3.81E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_08495 918453fd3c81952d894da2da3c2b69c1 255 Gene3D G3DSA:3.40.50.720 8 253 7.9E-56 T 11-10-2018 ATC04_05075 85f3841888154474136aacad5b53b0f0 602 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_05075 85f3841888154474136aacad5b53b0f0 602 Gene3D G3DSA:1.20.1560.10 9 349 4.4E-74 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_05075 85f3841888154474136aacad5b53b0f0 602 SUPERFAMILY SSF90123 29 349 7.19E-71 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_05075 85f3841888154474136aacad5b53b0f0 602 SMART SM00382 387 567 5.8E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_05075 85f3841888154474136aacad5b53b0f0 602 Pfam PF00005 ABC transporter 379 527 1.7E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_05075 85f3841888154474136aacad5b53b0f0 602 Gene3D G3DSA:3.40.50.300 353 599 1.7E-81 T 11-10-2018 ATC04_05075 85f3841888154474136aacad5b53b0f0 602 SUPERFAMILY SSF52540 354 596 2.61E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_05075 85f3841888154474136aacad5b53b0f0 602 Pfam PF00664 ABC transporter transmembrane region 43 314 3.3E-36 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ATC04_12445 19ef8a4e2286acc0179f4121d6404704 179 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 177 32.302 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 ATC04_12445 19ef8a4e2286acc0179f4121d6404704 179 Gene3D G3DSA:3.40.50.2020 7 178 1.4E-52 T 11-10-2018 ATC04_12445 19ef8a4e2286acc0179f4121d6404704 179 Pfam PF00156 Phosphoribosyl transferase domain 41 171 3.7E-11 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ATC04_12445 19ef8a4e2286acc0179f4121d6404704 179 SUPERFAMILY SSF53271 17 168 1.85E-40 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ATC04_01710 a8b792215859ed2410fce916464d585d 264 TIGRFAM TIGR04448 creatininase: creatininase 8 253 2.7E-100 T 11-10-2018 IPR031034 Creatinine amidohydrolase GO:0006601|GO:0006602|GO:0047789 KEGG: 00330+3.5.2.10 ATC04_01710 a8b792215859ed2410fce916464d585d 264 Pfam PF02633 Creatinine amidohydrolase 11 246 1.7E-48 T 11-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 ATC04_01710 a8b792215859ed2410fce916464d585d 264 Gene3D G3DSA:3.40.50.10310 2 255 6.4E-80 T 11-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 ATC04_01710 a8b792215859ed2410fce916464d585d 264 SUPERFAMILY SSF102215 3 248 1.24E-63 T 11-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 ATC04_07185 0ca1500dcc396d0408e4b4ea211cecf8 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 2.5E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_07185 0ca1500dcc396d0408e4b4ea211cecf8 325 Gene3D G3DSA:1.10.3720.10 88 308 1.3E-18 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_07185 0ca1500dcc396d0408e4b4ea211cecf8 325 SUPERFAMILY SSF161098 99 291 1.96E-20 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_11550 b2f17c5db948c8ed89fe69f9417cf75a 420 PRINTS PR00181 Maltose binding protein signature 377 396 4.0E-8 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 ATC04_11550 b2f17c5db948c8ed89fe69f9417cf75a 420 PRINTS PR00181 Maltose binding protein signature 149 168 4.0E-8 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 ATC04_11550 b2f17c5db948c8ed89fe69f9417cf75a 420 PRINTS PR00181 Maltose binding protein signature 90 108 4.0E-8 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 ATC04_11550 b2f17c5db948c8ed89fe69f9417cf75a 420 PRINTS PR00181 Maltose binding protein signature 254 273 4.0E-8 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 ATC04_11550 b2f17c5db948c8ed89fe69f9417cf75a 420 Pfam PF13416 Bacterial extracellular solute-binding protein 67 360 5.8E-39 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ATC04_11550 b2f17c5db948c8ed89fe69f9417cf75a 420 SUPERFAMILY SSF53850 46 415 1.19E-66 T 11-10-2018 ATC04_11550 b2f17c5db948c8ed89fe69f9417cf75a 420 Gene3D G3DSA:3.40.190.10 62 377 2.6E-96 T 11-10-2018 ATC04_11550 b2f17c5db948c8ed89fe69f9417cf75a 420 Gene3D G3DSA:3.40.190.10 158 409 2.6E-96 T 11-10-2018 ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 144 156 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 SMART SM00220 19 282 1.3E-59 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 Gene3D G3DSA:1.10.510.10 107 291 4.9E-51 T 11-10-2018 ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 Pfam PF00069 Protein kinase domain 19 272 1.9E-50 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 Gene3D G3DSA:3.30.10.20 445 514 1.1E-15 T 11-10-2018 ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 Pfam PF03793 PASTA domain 453 512 2.4E-10 T 11-10-2018 IPR005543 PASTA domain ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 Pfam PF03793 PASTA domain 381 442 2.5E-11 T 11-10-2018 IPR005543 PASTA domain ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 Pfam PF03793 PASTA domain 515 579 3.2E-8 T 11-10-2018 IPR005543 PASTA domain ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 Gene3D G3DSA:3.30.200.20 9 105 2.8E-32 T 11-10-2018 ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 Gene3D G3DSA:3.30.10.20 515 579 2.2E-12 T 11-10-2018 ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 SUPERFAMILY SSF56112 6 279 1.89E-74 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 Gene3D G3DSA:3.30.10.20 381 444 7.9E-15 T 11-10-2018 ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 SMART SM00740 514 579 9.0E-6 T 11-10-2018 IPR005543 PASTA domain ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 SMART SM00740 444 512 4.9E-10 T 11-10-2018 IPR005543 PASTA domain ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 SMART SM00740 377 443 9.3E-10 T 11-10-2018 IPR005543 PASTA domain ATC04_00545 a6067b530e7bc9401c49fd1b1f1672f2 644 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 25 48 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 ATC04_04745 3893df80d7e308d96ea31fa541c05825 94 Gene3D G3DSA:4.10.520.10 3 94 1.8E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ATC04_04745 3893df80d7e308d96ea31fa541c05825 94 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 4.5E-6 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ATC04_04745 3893df80d7e308d96ea31fa541c05825 94 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 4.5E-6 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ATC04_04745 3893df80d7e308d96ea31fa541c05825 94 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 4.5E-6 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ATC04_04745 3893df80d7e308d96ea31fa541c05825 94 SMART SM00411 3 92 4.6E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ATC04_04745 3893df80d7e308d96ea31fa541c05825 94 SUPERFAMILY SSF47729 3 92 2.21E-25 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ATC04_04745 3893df80d7e308d96ea31fa541c05825 94 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.4E-25 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ATC04_04750 3893df80d7e308d96ea31fa541c05825 94 Gene3D G3DSA:4.10.520.10 3 94 1.8E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ATC04_04750 3893df80d7e308d96ea31fa541c05825 94 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 4.5E-6 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ATC04_04750 3893df80d7e308d96ea31fa541c05825 94 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 4.5E-6 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ATC04_04750 3893df80d7e308d96ea31fa541c05825 94 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 4.5E-6 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ATC04_04750 3893df80d7e308d96ea31fa541c05825 94 SMART SM00411 3 92 4.6E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ATC04_04750 3893df80d7e308d96ea31fa541c05825 94 SUPERFAMILY SSF47729 3 92 2.21E-25 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ATC04_04750 3893df80d7e308d96ea31fa541c05825 94 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.4E-25 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ATC04_01635 3e35bd2dd04b4f1a8920f51dad15bc53 225 Gene3D G3DSA:1.10.10.10 13 78 1.7E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_01635 3e35bd2dd04b4f1a8920f51dad15bc53 225 SMART SM00345 20 78 1.9E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_01635 3e35bd2dd04b4f1a8920f51dad15bc53 225 SUPERFAMILY SSF46785 10 105 1.17E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_01635 3e35bd2dd04b4f1a8920f51dad15bc53 225 SUPERFAMILY SSF48008 84 220 2.88E-21 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_01635 3e35bd2dd04b4f1a8920f51dad15bc53 225 Pfam PF07729 FCD domain 89 212 7.3E-23 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_01635 3e35bd2dd04b4f1a8920f51dad15bc53 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 77 2.5E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_01635 3e35bd2dd04b4f1a8920f51dad15bc53 225 SMART SM00895 88 213 1.3E-18 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_01635 3e35bd2dd04b4f1a8920f51dad15bc53 225 Gene3D G3DSA:1.20.120.530 82 224 2.0E-24 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_18045 c2686322bec52de5885084db82d97ba5 556 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 3 556 31.132 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ATC04_18045 c2686322bec52de5885084db82d97ba5 556 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 8 555 2.2E-189 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ATC04_18045 c2686322bec52de5885084db82d97ba5 556 Pfam PF03814 Potassium-transporting ATPase A subunit 13 555 2.1E-211 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ATC04_18045 c2686322bec52de5885084db82d97ba5 556 PIRSF PIRSF001294 3 556 9.2E-206 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ATC04_14405 76a976898c3fe3c4df7a89ec38e9f833 225 SUPERFAMILY SSF101386 2 95 3.18E-17 T 11-10-2018 ATC04_14405 76a976898c3fe3c4df7a89ec38e9f833 225 Gene3D G3DSA:1.10.287.1080 1 124 6.0E-33 T 11-10-2018 ATC04_14405 76a976898c3fe3c4df7a89ec38e9f833 225 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 22 94 4.0E-22 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ATC04_16070 de0675f17e0ac3717e5d833b03feecd6 398 Pfam PF01494 FAD binding domain 9 349 1.3E-65 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 ATC04_16070 de0675f17e0ac3717e5d833b03feecd6 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 11 33 2.0E-25 T 11-10-2018 ATC04_16070 de0675f17e0ac3717e5d833b03feecd6 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 2.0E-25 T 11-10-2018 ATC04_16070 de0675f17e0ac3717e5d833b03feecd6 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 2.0E-25 T 11-10-2018 ATC04_16070 de0675f17e0ac3717e5d833b03feecd6 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 2.0E-25 T 11-10-2018 ATC04_16070 de0675f17e0ac3717e5d833b03feecd6 398 Gene3D G3DSA:3.50.50.60 9 358 6.8E-147 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_16070 de0675f17e0ac3717e5d833b03feecd6 398 SUPERFAMILY SSF51905 9 389 5.64E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_16070 de0675f17e0ac3717e5d833b03feecd6 398 SUPERFAMILY SSF54373 183 282 2.08E-38 T 11-10-2018 ATC04_16070 de0675f17e0ac3717e5d833b03feecd6 398 Gene3D G3DSA:3.30.9.10 80 394 6.8E-147 T 11-10-2018 ATC04_01910 1e1b914f2469be535c0520b98af6ca01 392 Pfam PF13412 Winged helix-turn-helix DNA-binding 21 65 9.4E-6 T 11-10-2018 ATC04_01910 1e1b914f2469be535c0520b98af6ca01 392 SUPERFAMILY SSF46785 18 87 2.08E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_01910 1e1b914f2469be535c0520b98af6ca01 392 Gene3D G3DSA:3.30.420.40 220 360 2.2E-16 T 11-10-2018 ATC04_01910 1e1b914f2469be535c0520b98af6ca01 392 Gene3D G3DSA:1.10.10.10 9 88 2.8E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_01910 1e1b914f2469be535c0520b98af6ca01 392 Gene3D G3DSA:3.30.420.40 90 219 9.6E-19 T 11-10-2018 ATC04_01910 1e1b914f2469be535c0520b98af6ca01 392 SUPERFAMILY SSF53067 92 384 3.89E-28 T 11-10-2018 ATC04_01910 1e1b914f2469be535c0520b98af6ca01 392 Pfam PF00480 ROK family 95 378 2.1E-19 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ATC04_01335 519717f4b32696138480bd013aab8820 394 Gene3D G3DSA:3.40.47.10 8 275 8.8E-140 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_01335 519717f4b32696138480bd013aab8820 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 389 2.6E-129 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_01335 519717f4b32696138480bd013aab8820 394 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 ATC04_01335 519717f4b32696138480bd013aab8820 394 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ATC04_01335 519717f4b32696138480bd013aab8820 394 Pfam PF02803 Thiolase, C-terminal domain 272 390 6.4E-40 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ATC04_01335 519717f4b32696138480bd013aab8820 394 Pfam PF00108 Thiolase, N-terminal domain 6 261 3.8E-85 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ATC04_01335 519717f4b32696138480bd013aab8820 394 PIRSF PIRSF000429 1 393 1.5E-121 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_01335 519717f4b32696138480bd013aab8820 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ATC04_01335 519717f4b32696138480bd013aab8820 394 SUPERFAMILY SSF53901 6 269 3.22E-76 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_01335 519717f4b32696138480bd013aab8820 394 Gene3D G3DSA:3.40.47.10 128 389 8.8E-140 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_01335 519717f4b32696138480bd013aab8820 394 SUPERFAMILY SSF53901 272 391 6.92E-37 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_04110 2cd3810ce4eda712001707dea4d954d5 466 Gene3D G3DSA:3.30.530.20 2 152 7.4E-12 T 11-10-2018 IPR023393 START-like domain superfamily ATC04_04110 2cd3810ce4eda712001707dea4d954d5 466 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 13 136 5.4E-6 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase ATC04_04110 2cd3810ce4eda712001707dea4d954d5 466 Gene3D G3DSA:3.40.50.720 160 457 3.5E-48 T 11-10-2018 ATC04_04110 2cd3810ce4eda712001707dea4d954d5 466 SUPERFAMILY SSF55961 10 152 3.0E-9 T 11-10-2018 ATC04_04110 2cd3810ce4eda712001707dea4d954d5 466 SUPERFAMILY SSF51735 164 416 6.77E-25 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_04110 2cd3810ce4eda712001707dea4d954d5 466 Pfam PF01370 NAD dependent epimerase/dehydratase family 164 295 4.8E-10 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ATC04_01225 4a9bfffc5abb4d41227ced500be8f267 300 Gene3D G3DSA:3.40.50.1820 21 300 2.3E-72 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_01225 4a9bfffc5abb4d41227ced500be8f267 300 SUPERFAMILY SSF53474 25 295 2.61E-60 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_01225 4a9bfffc5abb4d41227ced500be8f267 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 239 253 1.2E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_01225 4a9bfffc5abb4d41227ced500be8f267 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 68 83 1.2E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_01225 4a9bfffc5abb4d41227ced500be8f267 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 1.2E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_01225 4a9bfffc5abb4d41227ced500be8f267 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 125 138 1.2E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_01225 4a9bfffc5abb4d41227ced500be8f267 300 Pfam PF12697 Alpha/beta hydrolase family 42 285 1.5E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_00745 340fb1291d6e99b1c4afb901afe8738d 297 Pfam PF03102 NeuB family 44 279 7.5E-78 T 11-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 ATC04_00745 340fb1291d6e99b1c4afb901afe8738d 297 SUPERFAMILY SSF51569 11 287 7.69E-81 T 11-10-2018 ATC04_00745 340fb1291d6e99b1c4afb901afe8738d 297 Gene3D G3DSA:3.20.20.70 2 294 9.0E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 Gene3D G3DSA:1.10.1040.10 188 332 3.9E-45 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 186 207 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 54 81 1.4E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 171 195 1.4E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 131 151 1.4E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 196 220 1.4E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 236 253 1.4E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 178 317 5.5E-46 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 Gene3D G3DSA:3.40.50.720 1 185 4.5E-57 T 11-10-2018 ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 SUPERFAMILY SSF51735 1 178 8.63E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 320 33.473 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 1 158 2.9E-46 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 SUPERFAMILY SSF48179 177 329 8.84E-50 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_10665 0f3b86dfc291112a2fc82afe35242a0c 333 PIRSF PIRSF000114 1 330 6.3E-95 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ATC04_06155 6c9bae70ba9f65195e54ebf48c9a4deb 133 Pfam PF01042 Endoribonuclease L-PSP 18 130 2.6E-16 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 ATC04_06155 6c9bae70ba9f65195e54ebf48c9a4deb 133 SUPERFAMILY SSF55298 9 131 3.93E-22 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ATC04_06155 6c9bae70ba9f65195e54ebf48c9a4deb 133 Gene3D G3DSA:3.30.1330.40 6 132 6.1E-22 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 Hamap MF_00195 GTPase Der [der]. 72 504 34.456 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 SUPERFAMILY SSF52540 74 235 3.84E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 74 226 5.1E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 248 402 2.4E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 SUPERFAMILY SSF52540 207 500 3.57E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 73 501 3.0E-153 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 Gene3D G3DSA:3.30.300.20 423 504 2.7E-23 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 423 501 1.5E-22 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 Gene3D G3DSA:3.40.50.300 71 232 1.3E-43 T 11-10-2018 ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 299 314 1.7E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 250 270 1.7E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 272 290 1.7E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 Gene3D G3DSA:3.40.50.300 247 419 3.9E-40 T 11-10-2018 ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 PIRSF PIRSF006485 71 509 8.1E-154 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 Pfam PF01926 50S ribosome-binding GTPase 75 189 2.0E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_12270 60092322e4277c0fe1a802b7f1fb69b7 510 Pfam PF01926 50S ribosome-binding GTPase 249 367 5.6E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_10630 eb065d46ee7d420e65333b8a584e6959 260 Gene3D G3DSA:3.40.50.150 12 256 1.4E-50 T 11-10-2018 ATC04_10630 eb065d46ee7d420e65333b8a584e6959 260 SUPERFAMILY SSF53335 25 229 1.04E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_14970 67d25c86a7d6d94b23ac3a6ccd9da801 173 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 62 171 8.7E-6 T 11-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 ATC04_14970 67d25c86a7d6d94b23ac3a6ccd9da801 173 SUPERFAMILY SSF109854 19 169 1.98E-22 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_14970 67d25c86a7d6d94b23ac3a6ccd9da801 173 Gene3D G3DSA:1.20.120.450 26 173 1.7E-18 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_17350 655a1483aa898821b58b3af0ab6b89b1 402 Pfam PF00486 Transcriptional regulatory protein, C terminal 234 290 2.7E-4 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_17350 655a1483aa898821b58b3af0ab6b89b1 402 SMART SM00862 231 299 7.4E-5 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_17350 655a1483aa898821b58b3af0ab6b89b1 402 Gene3D G3DSA:3.30.450.40 22 205 4.0E-41 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_08430 8d74685176698390406186af4b561208 322 SUPERFAMILY SSF57716 276 313 3.46E-9 T 11-10-2018 ATC04_08430 8d74685176698390406186af4b561208 322 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 152 260 2.4E-18 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ATC04_08430 8d74685176698390406186af4b561208 322 Gene3D G3DSA:1.10.8.50 177 314 2.1E-36 T 11-10-2018 ATC04_08430 8d74685176698390406186af4b561208 322 Gene3D G3DSA:3.20.190.10 2 153 6.5E-10 T 11-10-2018 IPR035937 MutM-like, N-terminal ATC04_08430 8d74685176698390406186af4b561208 322 SUPERFAMILY SSF81624 2 153 7.72E-20 T 11-10-2018 IPR035937 MutM-like, N-terminal ATC04_08430 8d74685176698390406186af4b561208 322 SUPERFAMILY SSF46946 183 255 1.77E-18 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ATC04_08430 8d74685176698390406186af4b561208 322 SMART SM01232 152 265 4.0E-25 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ATC04_08430 8d74685176698390406186af4b561208 322 SMART SM00898 2 138 1.7E-15 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ATC04_16470 2d4ab72940a0bb8512f96a610f7487e6 239 Pfam PF01636 Phosphotransferase enzyme family 146 232 2.1E-11 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ATC04_16470 2d4ab72940a0bb8512f96a610f7487e6 239 Gene3D G3DSA:3.30.200.20 2 90 2.1E-6 T 11-10-2018 ATC04_16470 2d4ab72940a0bb8512f96a610f7487e6 239 Gene3D G3DSA:3.90.1200.10 92 237 3.3E-35 T 11-10-2018 ATC04_16470 2d4ab72940a0bb8512f96a610f7487e6 239 SUPERFAMILY SSF56112 19 235 2.55E-30 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ATC04_16470 2d4ab72940a0bb8512f96a610f7487e6 239 PIRSF PIRSF000706 1 147 2.6E-19 T 11-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 ATC04_16470 2d4ab72940a0bb8512f96a610f7487e6 239 PIRSF PIRSF000706 134 239 6.0E-32 T 11-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 ATC04_16675 136e77ba7654a59f4c4fc266018a2ecb 176 Pfam PF03640 Secreted repeat of unknown function 67 108 2.1E-10 T 11-10-2018 IPR005297 Lipoprotein repeat ATC04_16675 136e77ba7654a59f4c4fc266018a2ecb 176 Pfam PF03640 Secreted repeat of unknown function 126 168 6.8E-13 T 11-10-2018 IPR005297 Lipoprotein repeat ATC04_18370 7b18a7d8384fc8dcb02f744bbc73a0ec 279 SUPERFAMILY SSF52374 16 178 8.45E-27 T 11-10-2018 ATC04_18370 7b18a7d8384fc8dcb02f744bbc73a0ec 279 Gene3D G3DSA:3.40.50.620 1 189 4.1E-55 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_18370 7b18a7d8384fc8dcb02f744bbc73a0ec 279 Pfam PF06574 FAD synthetase 13 160 2.5E-44 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ATC04_16515 bad57c89c2fe18574d97f4acd0b5455c 323 Pfam PF12796 Ankyrin repeats (3 copies) 128 192 1.8E-8 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain ATC04_16515 bad57c89c2fe18574d97f4acd0b5455c 323 Pfam PF12796 Ankyrin repeats (3 copies) 202 296 3.5E-9 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain ATC04_16515 bad57c89c2fe18574d97f4acd0b5455c 323 SMART SM00248 227 256 220.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ATC04_16515 bad57c89c2fe18574d97f4acd0b5455c 323 SMART SM00248 194 223 260.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ATC04_16515 bad57c89c2fe18574d97f4acd0b5455c 323 SMART SM00248 128 157 70.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ATC04_16515 bad57c89c2fe18574d97f4acd0b5455c 323 SMART SM00248 161 190 1.2E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ATC04_16515 bad57c89c2fe18574d97f4acd0b5455c 323 SMART SM00248 260 294 1.9 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ATC04_16515 bad57c89c2fe18574d97f4acd0b5455c 323 SUPERFAMILY SSF48403 129 319 2.49E-42 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ATC04_16515 bad57c89c2fe18574d97f4acd0b5455c 323 Gene3D G3DSA:1.25.40.20 128 323 2.7E-48 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ATC04_12795 15578ddcbfdb57622dbe45ed5ad8225e 592 SUPERFAMILY SSF56425 350 516 8.02E-35 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_12795 15578ddcbfdb57622dbe45ed5ad8225e 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 288 9.5E-5 T 11-10-2018 ATC04_12795 15578ddcbfdb57622dbe45ed5ad8225e 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 9.5E-5 T 11-10-2018 ATC04_12795 15578ddcbfdb57622dbe45ed5ad8225e 592 Pfam PF00890 FAD binding domain 16 557 5.2E-105 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_12795 15578ddcbfdb57622dbe45ed5ad8225e 592 SUPERFAMILY SSF51905 7 573 4.45E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00225 71737cff388f77814d64edb160900c94 277 TIGRFAM TIGR00526 folB_dom: FolB domain 1 119 1.2E-29 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATC04_00225 71737cff388f77814d64edb160900c94 277 SMART SM00905 4 117 2.2E-44 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATC04_00225 71737cff388f77814d64edb160900c94 277 SUPERFAMILY SSF55620 2 118 4.45E-33 T 11-10-2018 ATC04_00225 71737cff388f77814d64edb160900c94 277 SUPERFAMILY SSF55083 122 267 2.09E-44 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ATC04_00225 71737cff388f77814d64edb160900c94 277 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 116 2.9E-33 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATC04_00225 71737cff388f77814d64edb160900c94 277 Pfam PF02152 Dihydroneopterin aldolase 4 115 5.4E-30 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATC04_00225 71737cff388f77814d64edb160900c94 277 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 125 250 2.5E-33 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ATC04_00225 71737cff388f77814d64edb160900c94 277 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 124 250 4.3E-37 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ATC04_00225 71737cff388f77814d64edb160900c94 277 Gene3D G3DSA:3.30.1130.10 1 119 2.3E-40 T 11-10-2018 ATC04_00225 71737cff388f77814d64edb160900c94 277 Gene3D G3DSA:3.30.70.560 121 276 1.2E-48 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ATC04_15890 f050310bb92f58172430dada91139be9 173 Gene3D G3DSA:3.90.79.10 1 165 1.5E-39 T 11-10-2018 ATC04_15890 f050310bb92f58172430dada91139be9 173 SUPERFAMILY SSF55811 3 157 1.49E-30 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_15890 f050310bb92f58172430dada91139be9 173 Pfam PF00293 NUDIX domain 29 152 1.8E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_15890 f050310bb92f58172430dada91139be9 173 PIRSF PIRSF017340 1 166 1.2E-42 T 11-10-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 ATC04_12935 260599abc58744bf946f6d60ada69053 459 SUPERFAMILY SSF53720 5 453 7.46E-141 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_12935 260599abc58744bf946f6d60ada69053 459 Gene3D G3DSA:3.40.605.10 6 453 2.4E-154 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_12935 260599abc58744bf946f6d60ada69053 459 Pfam PF00171 Aldehyde dehydrogenase family 6 453 2.2E-144 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_12935 260599abc58744bf946f6d60ada69053 459 Gene3D G3DSA:3.40.309.10 235 425 2.4E-154 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_12935 260599abc58744bf946f6d60ada69053 459 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 256 267 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ATC04_12935 260599abc58744bf946f6d60ada69053 459 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ATC04_03165 5de872caef8164d614cd6b9586b568a7 226 Gene3D G3DSA:1.20.120.530 83 219 4.9E-19 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_03165 5de872caef8164d614cd6b9586b568a7 226 Pfam PF07729 FCD domain 90 211 1.5E-17 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_03165 5de872caef8164d614cd6b9586b568a7 226 SMART SM00895 87 213 3.8E-8 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_03165 5de872caef8164d614cd6b9586b568a7 226 SUPERFAMILY SSF48008 89 216 2.22E-14 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_03165 5de872caef8164d614cd6b9586b568a7 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 3.2E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03165 5de872caef8164d614cd6b9586b568a7 226 Gene3D G3DSA:1.10.10.10 2 78 5.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03165 5de872caef8164d614cd6b9586b568a7 226 SUPERFAMILY SSF46785 11 81 1.08E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03165 5de872caef8164d614cd6b9586b568a7 226 SMART SM00345 19 77 5.0E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_06510 9ba5dcf5c8787053982145791e6ecfdc 139 Gene3D G3DSA:3.40.1350.140 2 139 2.0E-35 T 11-10-2018 IPR038231 MepB-like superfamily ATC04_06510 9ba5dcf5c8787053982145791e6ecfdc 139 Pfam PF08877 MepB protein 20 137 4.2E-38 T 11-10-2018 IPR011235 MepB-like ATC04_08120 650f907b24bef20ee2e04d0301a7ec01 844 Pfam PF12029 Domain of unknown function (DUF3516) 377 839 5.6E-202 T 11-10-2018 IPR021904 Protein of unknown function DUF3516 ATC04_08120 650f907b24bef20ee2e04d0301a7ec01 844 Pfam PF00271 Helicase conserved C-terminal domain 287 366 5.3E-7 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_08120 650f907b24bef20ee2e04d0301a7ec01 844 SMART SM00490 276 366 1.1E-14 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_08120 650f907b24bef20ee2e04d0301a7ec01 844 Gene3D G3DSA:3.40.50.300 28 207 3.7E-39 T 11-10-2018 ATC04_08120 650f907b24bef20ee2e04d0301a7ec01 844 Gene3D G3DSA:3.40.50.300 210 386 4.1E-38 T 11-10-2018 ATC04_08120 650f907b24bef20ee2e04d0301a7ec01 844 SMART SM00487 30 213 2.1E-20 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_08120 650f907b24bef20ee2e04d0301a7ec01 844 SUPERFAMILY SSF52540 43 379 1.27E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08120 650f907b24bef20ee2e04d0301a7ec01 844 Pfam PF00270 DEAD/DEAH box helicase 36 183 2.2E-11 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATC04_11795 4eabad8ba01019d5cd57449dbf0933e8 270 PRINTS PR00125 ATP synthase delta subunit signature 243 261 5.8E-11 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11795 4eabad8ba01019d5cd57449dbf0933e8 270 PRINTS PR00125 ATP synthase delta subunit signature 228 243 5.8E-11 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11795 4eabad8ba01019d5cd57449dbf0933e8 270 Pfam PF00213 ATP synthase delta (OSCP) subunit 103 268 9.0E-31 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11795 4eabad8ba01019d5cd57449dbf0933e8 270 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 115 268 1.5E-22 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11795 4eabad8ba01019d5cd57449dbf0933e8 270 Hamap MF_01416 ATP synthase subunit delta [atpD]. 92 270 15.164 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11795 4eabad8ba01019d5cd57449dbf0933e8 270 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 230 249 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_12565 1eac51542398dd4000d3b1903fe01ea6 226 Pfam PF00453 Ribosomal protein L20 3 109 2.8E-40 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_12565 1eac51542398dd4000d3b1903fe01ea6 226 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 2 114 3.0E-40 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_12565 1eac51542398dd4000d3b1903fe01ea6 226 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 4.0E-20 T 11-10-2018 ATC04_12565 1eac51542398dd4000d3b1903fe01ea6 226 SUPERFAMILY SSF74731 3 117 1.57E-42 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_12565 1eac51542398dd4000d3b1903fe01ea6 226 Gene3D G3DSA:1.10.720.90 2 55 1.3E-16 T 11-10-2018 ATC04_12565 1eac51542398dd4000d3b1903fe01ea6 226 PRINTS PR00062 Ribosomal protein L20 signature 75 101 7.6E-35 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_12565 1eac51542398dd4000d3b1903fe01ea6 226 PRINTS PR00062 Ribosomal protein L20 signature 42 71 7.6E-35 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_12565 1eac51542398dd4000d3b1903fe01ea6 226 PRINTS PR00062 Ribosomal protein L20 signature 12 41 7.6E-35 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_12565 1eac51542398dd4000d3b1903fe01ea6 226 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.106 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_12565 1eac51542398dd4000d3b1903fe01ea6 226 Gene3D G3DSA:1.10.1900.20 56 119 2.4E-25 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_12565 1eac51542398dd4000d3b1903fe01ea6 226 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_02370 1b1111d30ccfdc36da321a91c5e8e559 458 Gene3D G3DSA:3.40.309.10 236 425 1.9E-156 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_02370 1b1111d30ccfdc36da321a91c5e8e559 458 SUPERFAMILY SSF53720 4 455 1.31E-147 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_02370 1b1111d30ccfdc36da321a91c5e8e559 458 Gene3D G3DSA:3.40.605.10 3 452 1.9E-156 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_02370 1b1111d30ccfdc36da321a91c5e8e559 458 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 257 268 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ATC04_02370 1b1111d30ccfdc36da321a91c5e8e559 458 Pfam PF00171 Aldehyde dehydrogenase family 3 453 3.7E-146 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_03695 1dffd3c38d1134afe32c5d53c9eb7ec3 105 Gene3D G3DSA:2.102.10.10 1 105 6.9E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ATC04_03695 1dffd3c38d1134afe32c5d53c9eb7ec3 105 SUPERFAMILY SSF50022 3 105 5.63E-26 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ATC04_03695 1dffd3c38d1134afe32c5d53c9eb7ec3 105 Pfam PF00355 Rieske [2Fe-2S] domain 3 92 4.0E-18 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATC04_03840 401475bfdde3cdcdcbd6b4f10acc3eb9 309 Gene3D G3DSA:3.40.190.10 49 267 9.6E-62 T 11-10-2018 ATC04_03840 401475bfdde3cdcdcbd6b4f10acc3eb9 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 49 270 5.2E-60 T 11-10-2018 ATC04_03840 401475bfdde3cdcdcbd6b4f10acc3eb9 309 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 13 264 4.3E-59 T 11-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 ATC04_03840 401475bfdde3cdcdcbd6b4f10acc3eb9 309 Gene3D G3DSA:3.40.190.10 133 239 9.6E-62 T 11-10-2018 ATC04_03840 401475bfdde3cdcdcbd6b4f10acc3eb9 309 SUPERFAMILY SSF53850 42 271 1.01E-41 T 11-10-2018 ATC04_03840 401475bfdde3cdcdcbd6b4f10acc3eb9 309 SMART SM00062 46 279 0.0026 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ATC04_16550 b7b727e49bd0ae23d607a00ee825c897 115 Pfam PF03831 PhnA domain 46 115 5.8E-29 T 11-10-2018 IPR013988 PhnA protein, C-terminal ATC04_16550 b7b727e49bd0ae23d607a00ee825c897 115 SUPERFAMILY SSF82057 44 115 5.04E-22 T 11-10-2018 ATC04_16550 b7b727e49bd0ae23d607a00ee825c897 115 Gene3D G3DSA:2.30.30.40 43 115 2.6E-29 T 11-10-2018 ATC04_16550 b7b727e49bd0ae23d607a00ee825c897 115 SUPERFAMILY SSF57783 4 37 1.02E-13 T 11-10-2018 ATC04_16550 b7b727e49bd0ae23d607a00ee825c897 115 Pfam PF08274 PhnA Zinc-Ribbon 4 32 6.1E-15 T 11-10-2018 IPR013987 PhnA protein, N-terminal ATC04_16550 b7b727e49bd0ae23d607a00ee825c897 115 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 5 114 1.4E-36 T 11-10-2018 IPR004624 PhnA protein ATC04_16550 b7b727e49bd0ae23d607a00ee825c897 115 Gene3D G3DSA:2.20.25.10 1 42 9.7E-19 T 11-10-2018 ATC04_01800 249796f5facdd7da47b324ff8a8c2462 494 SUPERFAMILY SSF52091 401 484 1.55E-11 T 11-10-2018 IPR036513 STAS domain superfamily ATC04_01800 249796f5facdd7da47b324ff8a8c2462 494 Pfam PF00916 Sulfate permease family 24 153 3.6E-18 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 ATC04_01800 249796f5facdd7da47b324ff8a8c2462 494 Pfam PF00916 Sulfate permease family 174 368 6.5E-25 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 ATC04_01800 249796f5facdd7da47b324ff8a8c2462 494 Gene3D G3DSA:3.30.750.24 399 491 1.7E-26 T 11-10-2018 IPR036513 STAS domain superfamily ATC04_01800 249796f5facdd7da47b324ff8a8c2462 494 Pfam PF01740 STAS domain 409 479 5.5E-5 T 11-10-2018 IPR002645 STAS domain ATC04_17085 572efbf71a28deb72f71819dea261c93 350 Gene3D G3DSA:3.90.226.40 1 342 3.1E-104 T 11-10-2018 ATC04_17085 572efbf71a28deb72f71819dea261c93 350 Pfam PF16113 Enoyl-CoA hydratase/isomerase 13 318 1.3E-101 T 11-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 ATC04_17085 572efbf71a28deb72f71819dea261c93 350 SUPERFAMILY SSF52096 3 311 5.77E-58 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_17295 f550a53c3b0e21bf31055e77ed232af5 123 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ATC04_17295 f550a53c3b0e21bf31055e77ed232af5 123 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 1.4E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ATC04_17295 f550a53c3b0e21bf31055e77ed232af5 123 PRINTS PR00421 Thioredoxin family signature 21 29 1.2E-7 T 11-10-2018 ATC04_17295 f550a53c3b0e21bf31055e77ed232af5 123 PRINTS PR00421 Thioredoxin family signature 29 38 1.2E-7 T 11-10-2018 ATC04_17295 f550a53c3b0e21bf31055e77ed232af5 123 PRINTS PR00421 Thioredoxin family signature 68 79 1.2E-7 T 11-10-2018 ATC04_17295 f550a53c3b0e21bf31055e77ed232af5 123 Gene3D G3DSA:3.40.30.10 3 113 2.0E-27 T 11-10-2018 ATC04_17295 f550a53c3b0e21bf31055e77ed232af5 123 PIRSF PIRSF000077 1 104 1.9E-27 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ATC04_17295 f550a53c3b0e21bf31055e77ed232af5 123 SUPERFAMILY SSF52833 3 105 1.5E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_17295 f550a53c3b0e21bf31055e77ed232af5 123 Pfam PF00085 Thioredoxin 4 101 1.1E-24 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 ATC04_02835 448acba4ab6b43490ed49405128c5fba 418 Gene3D G3DSA:1.20.1250.20 18 400 1.7E-28 T 11-10-2018 ATC04_02835 448acba4ab6b43490ed49405128c5fba 418 SUPERFAMILY SSF103473 11 399 4.45E-39 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_02835 448acba4ab6b43490ed49405128c5fba 418 Pfam PF07690 Major Facilitator Superfamily 39 365 1.0E-16 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 Gene3D G3DSA:3.30.9.50 102 318 8.4E-125 T 11-10-2018 ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 SUPERFAMILY SSF54373 222 321 9.02E-30 T 11-10-2018 ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 Pfam PF07976 Phenol hydroxylase, C-terminal dimerisation domain 434 593 9.8E-41 T 11-10-2018 IPR012941 Phenol hydroxylase, C-terminal dimerisation domain ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 SUPERFAMILY SSF51905 33 415 1.18E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 34 56 2.4E-34 T 11-10-2018 ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 198 213 2.4E-34 T 11-10-2018 ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 389 405 2.4E-34 T 11-10-2018 ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 371 389 2.4E-34 T 11-10-2018 ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 353 369 2.4E-34 T 11-10-2018 ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 353 2.4E-34 T 11-10-2018 ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 Pfam PF01494 FAD binding domain 33 404 1.8E-72 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 Gene3D G3DSA:3.40.30.20 421 627 8.0E-56 T 11-10-2018 IPR038220 Phenol hydroxylase, C-terminal TRX-fold domain superfamily ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 SUPERFAMILY SSF52833 444 628 5.81E-49 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_12245 4df53bd76aa841713ad3fade25c9dd93 629 Gene3D G3DSA:3.50.50.60 34 401 8.4E-125 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00785 466e45b32be25488d459d47ca153efa7 231 Pfam PF00196 Bacterial regulatory proteins, luxR family 162 217 7.4E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_00785 466e45b32be25488d459d47ca153efa7 231 Gene3D G3DSA:3.40.50.12740 5 223 3.0E-76 T 11-10-2018 ATC04_00785 466e45b32be25488d459d47ca153efa7 231 SUPERFAMILY SSF52172 4 134 1.57E-36 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_00785 466e45b32be25488d459d47ca153efa7 231 Pfam PF00072 Response regulator receiver domain 7 119 7.9E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_00785 466e45b32be25488d459d47ca153efa7 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 4.1E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_00785 466e45b32be25488d459d47ca153efa7 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 4.1E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_00785 466e45b32be25488d459d47ca153efa7 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 4.1E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_00785 466e45b32be25488d459d47ca153efa7 231 ProSitePatterns PS00622 LuxR-type HTH domain signature. 177 204 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_00785 466e45b32be25488d459d47ca153efa7 231 SMART SM00448 5 118 6.6E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_00785 466e45b32be25488d459d47ca153efa7 231 SMART SM00421 160 217 8.2E-27 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_00785 466e45b32be25488d459d47ca153efa7 231 SUPERFAMILY SSF46894 154 223 8.16E-24 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_16150 fdd5e9c9f3424eaa4477c9b16da6c2c1 224 SUPERFAMILY SSF55781 63 220 1.7E-32 T 11-10-2018 ATC04_16150 fdd5e9c9f3424eaa4477c9b16da6c2c1 224 Pfam PF09339 IclR helix-turn-helix domain 4 38 9.3E-7 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_16150 fdd5e9c9f3424eaa4477c9b16da6c2c1 224 SUPERFAMILY SSF46785 6 59 4.35E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_16150 fdd5e9c9f3424eaa4477c9b16da6c2c1 224 Gene3D G3DSA:1.10.10.10 1 57 1.2E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16150 fdd5e9c9f3424eaa4477c9b16da6c2c1 224 Gene3D G3DSA:3.30.450.40 58 218 7.4E-38 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_16150 fdd5e9c9f3424eaa4477c9b16da6c2c1 224 Pfam PF01614 Bacterial transcriptional regulator 104 218 7.8E-12 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ATC04_12020 8e0081aa63e303e259b8c028fd7935cf 268 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_12020 8e0081aa63e303e259b8c028fd7935cf 268 Gene3D G3DSA:3.40.50.300 1 267 3.7E-67 T 11-10-2018 ATC04_12020 8e0081aa63e303e259b8c028fd7935cf 268 SUPERFAMILY SSF52540 1 225 3.19E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12020 8e0081aa63e303e259b8c028fd7935cf 268 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 216 3.3E-87 T 11-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 ATC04_12020 8e0081aa63e303e259b8c028fd7935cf 268 Pfam PF00005 ABC transporter 20 167 1.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_12020 8e0081aa63e303e259b8c028fd7935cf 268 SMART SM00382 29 216 5.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_11075 16f3908deb57b191d542bb7bc7247dcf 503 Gene3D G3DSA:3.30.70.270 75 251 9.7E-49 T 11-10-2018 ATC04_11075 16f3908deb57b191d542bb7bc7247dcf 503 Gene3D G3DSA:3.20.20.450 252 499 4.3E-68 T 11-10-2018 IPR035919 EAL domain superfamily ATC04_11075 16f3908deb57b191d542bb7bc7247dcf 503 SMART SM00267 70 239 1.8E-45 T 11-10-2018 IPR000160 GGDEF domain ATC04_11075 16f3908deb57b191d542bb7bc7247dcf 503 SUPERFAMILY SSF141868 255 490 5.89E-59 T 11-10-2018 IPR035919 EAL domain superfamily ATC04_11075 16f3908deb57b191d542bb7bc7247dcf 503 SUPERFAMILY SSF55073 86 239 4.79E-41 T 11-10-2018 IPR029787 Nucleotide cyclase ATC04_11075 16f3908deb57b191d542bb7bc7247dcf 503 Pfam PF00563 EAL domain 255 490 1.1E-62 T 11-10-2018 IPR001633 EAL domain ATC04_11075 16f3908deb57b191d542bb7bc7247dcf 503 SMART SM00052 249 497 5.6E-50 T 11-10-2018 IPR001633 EAL domain ATC04_11075 16f3908deb57b191d542bb7bc7247dcf 503 Pfam PF00990 Diguanylate cyclase, GGDEF domain 81 234 1.7E-40 T 11-10-2018 IPR000160 GGDEF domain ATC04_11075 16f3908deb57b191d542bb7bc7247dcf 503 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 79 237 2.1E-38 T 11-10-2018 IPR000160 GGDEF domain ATC04_15865 0f277b6b51dacc46f3fd0c1f75d76f5f 157 Gene3D G3DSA:3.40.140.10 1 157 1.1E-56 T 11-10-2018 ATC04_15865 0f277b6b51dacc46f3fd0c1f75d76f5f 157 Pfam PF14437 MafB19-like deaminase 4 156 6.3E-31 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 ATC04_15865 0f277b6b51dacc46f3fd0c1f75d76f5f 157 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 98 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ATC04_15865 0f277b6b51dacc46f3fd0c1f75d76f5f 157 SUPERFAMILY SSF53927 4 156 6.02E-51 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ATC04_15865 0f277b6b51dacc46f3fd0c1f75d76f5f 157 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 9 157 45.329 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 ATC04_08500 1a5d88a2c5abd47df9b71438a2acd0bc 244 Pfam PF01903 CbiX 15 115 1.9E-8 T 11-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 ATC04_08500 1a5d88a2c5abd47df9b71438a2acd0bc 244 Gene3D G3DSA:3.40.50.1400 8 125 6.1E-19 T 11-10-2018 ATC04_08500 1a5d88a2c5abd47df9b71438a2acd0bc 244 Gene3D G3DSA:3.40.50.1400 126 232 4.4E-9 T 11-10-2018 ATC04_08500 1a5d88a2c5abd47df9b71438a2acd0bc 244 SUPERFAMILY SSF53800 10 217 7.3E-16 T 11-10-2018 ATC04_03645 bb3ea25f2b013b84b82dce071d0628e4 483 Pfam PF02589 LUD domain 77 299 2.1E-47 T 11-10-2018 IPR003741 LUD domain ATC04_03645 bb3ea25f2b013b84b82dce071d0628e4 483 SUPERFAMILY SSF100950 69 300 7.95E-36 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_03645 bb3ea25f2b013b84b82dce071d0628e4 483 SUPERFAMILY SSF54862 295 399 8.79E-15 T 11-10-2018 ATC04_03645 bb3ea25f2b013b84b82dce071d0628e4 483 Gene3D G3DSA:3.40.50.10420 132 299 2.0E-8 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ATC04_03645 bb3ea25f2b013b84b82dce071d0628e4 483 Pfam PF13183 4Fe-4S dicluster domain 315 384 1.0E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ATC04_03645 bb3ea25f2b013b84b82dce071d0628e4 483 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 318 329 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ATC04_03645 bb3ea25f2b013b84b82dce071d0628e4 483 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 24 465 2.5E-138 T 11-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 ATC04_14030 d61bbd2f1ed26d6bde40f7d2c98b77e2 94 Gene3D G3DSA:2.40.240.10 2 92 4.8E-25 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATC04_14030 d61bbd2f1ed26d6bde40f7d2c98b77e2 94 SUPERFAMILY SSF50715 4 92 6.1E-23 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATC04_14030 d61bbd2f1ed26d6bde40f7d2c98b77e2 94 Pfam PF01386 Ribosomal L25p family 6 90 8.3E-21 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ATC04_14030 d61bbd2f1ed26d6bde40f7d2c98b77e2 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 91 1.0E-14 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ATC04_05375 94b0fdc03cfea52f8c40cd7732e4f393 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 116 5.9E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_05375 94b0fdc03cfea52f8c40cd7732e4f393 122 Gene3D G3DSA:3.10.180.10 2 121 6.0E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_05375 94b0fdc03cfea52f8c40cd7732e4f393 122 SUPERFAMILY SSF54593 8 120 6.71E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 SUPERFAMILY SSF55874 303 457 3.01E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 458 9.8E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 Gene3D G3DSA:1.10.287.130 190 303 5.2E-28 T 11-10-2018 ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 Pfam PF00672 HAMP domain 187 235 5.4E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 SUPERFAMILY SSF47384 222 299 9.61E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 298 1.4E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 SMART SM00388 239 303 3.1E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 SUPERFAMILY SSF158472 188 236 1.7E-8 T 11-10-2018 ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 SMART SM00304 186 238 1.5E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 SMART SM00387 344 459 2.4E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 2.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 2.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 2.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 2.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_16935 334a85a8f8ae3e359ca8edbe16107597 464 Gene3D G3DSA:3.30.565.10 305 461 6.7E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_05930 c692a787b08af49183c4030594eb51d2 191 PRINTS PR00070 Dihydrofolate reductase signature 40 48 8.1E-16 T 11-10-2018 ATC04_05930 c692a787b08af49183c4030594eb51d2 191 PRINTS PR00070 Dihydrofolate reductase signature 114 128 8.1E-16 T 11-10-2018 ATC04_05930 c692a787b08af49183c4030594eb51d2 191 PRINTS PR00070 Dihydrofolate reductase signature 53 64 8.1E-16 T 11-10-2018 ATC04_05930 c692a787b08af49183c4030594eb51d2 191 PRINTS PR00070 Dihydrofolate reductase signature 26 36 8.1E-16 T 11-10-2018 ATC04_05930 c692a787b08af49183c4030594eb51d2 191 Gene3D G3DSA:3.40.430.10 10 191 5.2E-51 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_05930 c692a787b08af49183c4030594eb51d2 191 SUPERFAMILY SSF53597 15 189 1.15E-47 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_05930 c692a787b08af49183c4030594eb51d2 191 Pfam PF00186 Dihydrofolate reductase 16 158 1.8E-44 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 ATC04_12015 185ae6a5156c1503d934092235536d46 304 Gene3D G3DSA:3.30.70.3040 44 166 4.9E-28 T 11-10-2018 ATC04_12015 185ae6a5156c1503d934092235536d46 304 Pfam PF02687 FtsX-like permease family 211 295 3.9E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ATC04_12015 185ae6a5156c1503d934092235536d46 304 PIRSF PIRSF003097 1 304 2.1E-68 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 ATC04_09805 68c36207ca4c2feb5ffff4af7411280a 673 Pfam PF01756 Acyl-CoA oxidase 493 634 5.6E-18 T 11-10-2018 IPR002655 Acyl-CoA oxidase, C-terminal GO:0003997|GO:0005777|GO:0006635 KEGG: 00071+1.3.3.6|KEGG: 00592+1.3.3.6|MetaCyc: PWY-5136|MetaCyc: PWY-6837|MetaCyc: PWY-6920|MetaCyc: PWY-7007|MetaCyc: PWY-7288|MetaCyc: PWY-7291|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7574|MetaCyc: PWY-7606|MetaCyc: PWY-7726|MetaCyc: PWY-7854|MetaCyc: PWY-7858 ATC04_09805 68c36207ca4c2feb5ffff4af7411280a 673 Gene3D G3DSA:1.20.140.10 497 624 5.6E-21 T 11-10-2018 ATC04_09805 68c36207ca4c2feb5ffff4af7411280a 673 Gene3D G3DSA:1.10.540.10 3 130 2.2E-7 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_09805 68c36207ca4c2feb5ffff4af7411280a 673 SUPERFAMILY SSF47203 272 455 3.54E-49 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_09805 68c36207ca4c2feb5ffff4af7411280a 673 Gene3D G3DSA:2.40.110.10 132 268 2.1E-45 T 11-10-2018 ATC04_09805 68c36207ca4c2feb5ffff4af7411280a 673 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 276 437 1.2E-9 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_09805 68c36207ca4c2feb5ffff4af7411280a 673 Gene3D G3DSA:1.20.140.10 276 445 5.0E-51 T 11-10-2018 ATC04_09805 68c36207ca4c2feb5ffff4af7411280a 673 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 59 127 3.2E-6 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_09805 68c36207ca4c2feb5ffff4af7411280a 673 SUPERFAMILY SSF47203 491 634 8.16E-33 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_09805 68c36207ca4c2feb5ffff4af7411280a 673 SUPERFAMILY SSF56645 40 255 9.03E-49 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_09805 68c36207ca4c2feb5ffff4af7411280a 673 PIRSF PIRSF000168 2 673 7.5E-172 T 11-10-2018 IPR012258 Acyl-CoA oxidase GO:0003997|GO:0005777|GO:0006631|GO:0071949 KEGG: 00071+1.3.3.6|KEGG: 00592+1.3.3.6|MetaCyc: PWY-5136|MetaCyc: PWY-6837|MetaCyc: PWY-6920|MetaCyc: PWY-7007|MetaCyc: PWY-7288|MetaCyc: PWY-7291|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7574|MetaCyc: PWY-7606|MetaCyc: PWY-7726|MetaCyc: PWY-7854|MetaCyc: PWY-7858|Reactome: R-HSA-9033241 ATC04_09805 68c36207ca4c2feb5ffff4af7411280a 673 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 242 6.1E-13 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_04265 42c07b623e538608a9170eb2619848d1 179 Pfam PF08002 Protein of unknown function (DUF1697) 1 121 1.4E-27 T 11-10-2018 IPR012545 Protein of unknown function DUF1697 ATC04_04265 42c07b623e538608a9170eb2619848d1 179 SUPERFAMILY SSF160379 1 177 7.59E-35 T 11-10-2018 ATC04_04265 42c07b623e538608a9170eb2619848d1 179 PIRSF PIRSF008502 1 179 7.2E-36 T 11-10-2018 IPR012545 Protein of unknown function DUF1697 ATC04_04265 42c07b623e538608a9170eb2619848d1 179 Gene3D G3DSA:3.30.70.1280 1 87 1.3E-18 T 11-10-2018 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 Gene3D G3DSA:1.10.132.30 719 853 1.4E-48 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 Gene3D G3DSA:1.10.40.90 449 491 3.0E-23 T 11-10-2018 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 Pfam PF04983 RNA polymerase Rpb1, domain 3 564 722 2.3E-21 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 Pfam PF04997 RNA polymerase Rpb1, domain 1 10 417 1.7E-81 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 Pfam PF04998 RNA polymerase Rpb1, domain 5 829 1191 1.9E-63 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 Gene3D G3DSA:1.10.150.390 1192 1255 5.3E-29 T 11-10-2018 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 Gene3D G3DSA:2.40.50.100 1028 1091 6.6E-66 T 11-10-2018 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1243 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 SMART SM00663 310 589 3.0E-172 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 1 1253 17.449 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 SUPERFAMILY SSF64484 9 1244 0.0 T 11-10-2018 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 Pfam PF00623 RNA polymerase Rpb1, domain 2 470 560 1.8E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 Pfam PF00623 RNA polymerase Rpb1, domain 2 419 462 2.7E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 Gene3D G3DSA:1.10.1790.20 1012 1190 6.6E-66 T 11-10-2018 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 Pfam PF05000 RNA polymerase Rpb1, domain 4 752 817 6.6E-8 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06065 c3916744761cd4560c939cd27851f68e 1296 Gene3D G3DSA:1.10.274.100 565 718 4.2E-36 T 11-10-2018 ATC04_05780 a5d2b1c9fbf9e1bec934c99dfdd7651c 308 Gene3D G3DSA:3.30.2320.10 142 242 3.9E-8 T 11-10-2018 ATC04_05780 a5d2b1c9fbf9e1bec934c99dfdd7651c 308 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 1 286 2.2E-22 T 11-10-2018 IPR024455 Phage capsid ATC04_05780 a5d2b1c9fbf9e1bec934c99dfdd7651c 308 SUPERFAMILY SSF56563 1 284 7.72E-26 T 11-10-2018 ATC04_05780 a5d2b1c9fbf9e1bec934c99dfdd7651c 308 Pfam PF05065 Phage capsid family 12 286 1.6E-21 T 11-10-2018 IPR024455 Phage capsid ATC04_05780 a5d2b1c9fbf9e1bec934c99dfdd7651c 308 Gene3D G3DSA:3.30.2400.10 61 282 3.9E-8 T 11-10-2018 ATC04_05340 2f893920da15ee41f04fce631ea0afc0 407 ProSitePatterns PS00099 Thiolases active site. 388 401 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 ATC04_05340 2f893920da15ee41f04fce631ea0afc0 407 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 405 5.3E-138 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_05340 2f893920da15ee41f04fce631ea0afc0 407 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ATC04_05340 2f893920da15ee41f04fce631ea0afc0 407 Pfam PF02803 Thiolase, C-terminal domain 281 405 6.9E-41 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ATC04_05340 2f893920da15ee41f04fce631ea0afc0 407 Gene3D G3DSA:3.40.47.10 7 286 2.4E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_05340 2f893920da15ee41f04fce631ea0afc0 407 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ATC04_05340 2f893920da15ee41f04fce631ea0afc0 407 Pfam PF00108 Thiolase, N-terminal domain 6 272 1.4E-78 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ATC04_05340 2f893920da15ee41f04fce631ea0afc0 407 SUPERFAMILY SSF53901 281 405 1.86E-36 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_05340 2f893920da15ee41f04fce631ea0afc0 407 PIRSF PIRSF000429 1 407 5.6E-132 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_05340 2f893920da15ee41f04fce631ea0afc0 407 Gene3D G3DSA:3.40.47.10 140 404 2.4E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_05340 2f893920da15ee41f04fce631ea0afc0 407 SUPERFAMILY SSF53901 4 280 4.01E-84 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_09305 473494174448d4fe17181947f7b7c1b8 408 SUPERFAMILY SSF52507 2 174 1.28E-51 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ATC04_09305 473494174448d4fe17181947f7b7c1b8 408 Gene3D G3DSA:3.40.50.1950 1 176 5.6E-50 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ATC04_09305 473494174448d4fe17181947f7b7c1b8 408 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 179 370 1.4E-63 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ATC04_09305 473494174448d4fe17181947f7b7c1b8 408 Gene3D G3DSA:3.40.50.10300 177 403 6.8E-76 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ATC04_09305 473494174448d4fe17181947f7b7c1b8 408 SUPERFAMILY SSF102645 167 400 5.89E-63 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ATC04_09305 473494174448d4fe17181947f7b7c1b8 408 Pfam PF02441 Flavoprotein 2 173 6.8E-39 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 ATC04_09305 473494174448d4fe17181947f7b7c1b8 408 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 396 3.8E-113 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 ATC04_03985 5c12b36ee6c90d79ad85383d44556599 141 SUPERFAMILY SSF54593 2 135 2.82E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_03985 5c12b36ee6c90d79ad85383d44556599 141 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 132 5.1E-11 T 11-10-2018 IPR028973 PhnB-like ATC04_03985 5c12b36ee6c90d79ad85383d44556599 141 Gene3D G3DSA:3.10.180.10 2 141 2.1E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_02680 f247b14280e99b11865ef57c1a7ae482 427 SUPERFAMILY SSF103473 10 412 2.62E-40 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_02680 f247b14280e99b11865ef57c1a7ae482 427 Gene3D G3DSA:1.20.1250.20 8 204 5.9E-19 T 11-10-2018 ATC04_02680 f247b14280e99b11865ef57c1a7ae482 427 Gene3D G3DSA:1.20.1250.20 224 414 6.8E-13 T 11-10-2018 ATC04_02680 f247b14280e99b11865ef57c1a7ae482 427 Pfam PF07690 Major Facilitator Superfamily 17 377 2.3E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 SUPERFAMILY SSF47323 356 511 1.2E-38 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 SUPERFAMILY SSF52374 5 358 1.85E-109 T 11-10-2018 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 Gene3D G3DSA:2.170.220.10 119 232 9.6E-151 T 11-10-2018 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 Pfam PF09334 tRNA synthetases class I (M) 9 142 8.3E-45 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 Pfam PF09334 tRNA synthetases class I (M) 154 367 2.3E-66 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 Gene3D G3DSA:3.40.50.620 8 340 9.6E-151 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_10765 165967edf6c99529580ac3afa6124e35 516 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 Hamap MF_01228 Methionine--tRNA ligase [metG]. 4 511 45.657 T 11-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 230 241 2.8E-31 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 2.8E-31 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 355 366 2.8E-31 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 2.8E-31 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 2.8E-31 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 263 278 2.8E-31 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 Gene3D G3DSA:1.10.730.10 344 515 1.0E-48 T 11-10-2018 ATC04_10765 165967edf6c99529580ac3afa6124e35 516 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 482 7.8E-155 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATC04_01180 e69c500f133798638b36185c0807084c 461 Gene3D G3DSA:3.40.50.720 235 461 2.2E-71 T 11-10-2018 ATC04_01180 e69c500f133798638b36185c0807084c 461 SMART SM01274 92 225 9.5E-81 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ATC04_01180 e69c500f133798638b36185c0807084c 461 Gene3D G3DSA:3.40.50.10380 74 234 3.2E-70 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 ATC04_01180 e69c500f133798638b36185c0807084c 461 SUPERFAMILY SSF51735 237 460 3.21E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01180 e69c500f133798638b36185c0807084c 461 SUPERFAMILY SSF53223 86 235 3.38E-55 T 11-10-2018 ATC04_01180 e69c500f133798638b36185c0807084c 461 PIRSF PIRSF000106 25 461 7.2E-80 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ATC04_01180 e69c500f133798638b36185c0807084c 461 Pfam PF03949 Malic enzyme, NAD binding domain 239 455 2.7E-23 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ATC04_01180 e69c500f133798638b36185c0807084c 461 Pfam PF00390 Malic enzyme, N-terminal domain 93 225 2.4E-28 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ATC04_01180 e69c500f133798638b36185c0807084c 461 SMART SM00919 237 459 1.7E-106 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ATC04_00690 cb774759eaf23a87ad77e8fd7f3110a5 107 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 104 3.2E-37 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ATC04_00690 cb774759eaf23a87ad77e8fd7f3110a5 107 Pfam PF00085 Thioredoxin 5 102 5.1E-30 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 ATC04_00690 cb774759eaf23a87ad77e8fd7f3110a5 107 SUPERFAMILY SSF52833 3 106 4.11E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_00690 cb774759eaf23a87ad77e8fd7f3110a5 107 ProSitePatterns PS00194 Thioredoxin family active site. 24 42 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ATC04_00690 cb774759eaf23a87ad77e8fd7f3110a5 107 PRINTS PR00421 Thioredoxin family signature 31 40 9.0E-7 T 11-10-2018 ATC04_00690 cb774759eaf23a87ad77e8fd7f3110a5 107 PRINTS PR00421 Thioredoxin family signature 23 31 9.0E-7 T 11-10-2018 ATC04_00690 cb774759eaf23a87ad77e8fd7f3110a5 107 PRINTS PR00421 Thioredoxin family signature 71 82 9.0E-7 T 11-10-2018 ATC04_00690 cb774759eaf23a87ad77e8fd7f3110a5 107 PIRSF PIRSF000077 1 107 3.6E-40 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ATC04_00690 cb774759eaf23a87ad77e8fd7f3110a5 107 Gene3D G3DSA:3.40.30.10 1 105 1.6E-34 T 11-10-2018 ATC04_11555 79ef653771f7ac9265f97e35e5e3a5a2 559 Pfam PF00128 Alpha amylase, catalytic domain 42 403 2.3E-74 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATC04_11555 79ef653771f7ac9265f97e35e5e3a5a2 559 Gene3D G3DSA:3.90.400.10 119 193 7.5E-148 T 11-10-2018 ATC04_11555 79ef653771f7ac9265f97e35e5e3a5a2 559 SMART SM00642 27 432 3.2E-113 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATC04_11555 79ef653771f7ac9265f97e35e5e3a5a2 559 SUPERFAMILY SSF51445 18 490 2.2E-125 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ATC04_11555 79ef653771f7ac9265f97e35e5e3a5a2 559 Gene3D G3DSA:3.20.20.80 19 487 7.5E-148 T 11-10-2018 ATC04_08290 3b2c9607a512c871d4c61e3ae6b08f44 318 SUPERFAMILY SSF52540 29 233 5.04E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08290 3b2c9607a512c871d4c61e3ae6b08f44 318 Pfam PF00005 ABC transporter 32 171 2.2E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_08290 3b2c9607a512c871d4c61e3ae6b08f44 318 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_08290 3b2c9607a512c871d4c61e3ae6b08f44 318 SMART SM00382 41 219 1.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_08290 3b2c9607a512c871d4c61e3ae6b08f44 318 Gene3D G3DSA:3.40.50.300 4 241 1.4E-55 T 11-10-2018 ATC04_18445 259fb9fbbc38f998080e2d99b6eb8ee3 142 Pfam PF02643 Uncharacterized ACR, COG1430 37 141 4.7E-23 T 11-10-2018 IPR003795 Protein of unknown function DUF192 ATC04_18445 259fb9fbbc38f998080e2d99b6eb8ee3 142 Gene3D G3DSA:2.60.120.1140 7 141 5.3E-26 T 11-10-2018 IPR038695 Saro_0823-like superfamily ATC04_11875 8c3435c4efa9d13cd542953cf34590c5 263 SUPERFAMILY SSF52540 1 234 5.22E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11875 8c3435c4efa9d13cd542953cf34590c5 263 Pfam PF00005 ABC transporter 22 177 2.8E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_11875 8c3435c4efa9d13cd542953cf34590c5 263 SMART SM00382 31 233 2.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_11875 8c3435c4efa9d13cd542953cf34590c5 263 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_11875 8c3435c4efa9d13cd542953cf34590c5 263 Gene3D G3DSA:3.40.50.300 1 261 8.8E-60 T 11-10-2018 ATC04_14360 53a1d0a0edef3a301bc43460f2067d72 287 Pfam PF00665 Integrase core domain 117 231 1.3E-29 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_14360 53a1d0a0edef3a301bc43460f2067d72 287 SUPERFAMILY SSF53098 112 271 2.4E-39 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_14360 53a1d0a0edef3a301bc43460f2067d72 287 Gene3D G3DSA:3.30.420.10 113 268 1.3E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_06670 17ef515b962f1fcb59c0c91620e5f166 135 SUPERFAMILY SSF52788 4 128 2.09E-37 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily ATC04_06670 17ef515b962f1fcb59c0c91620e5f166 135 SMART SM00226 5 130 1.6E-48 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ATC04_06670 17ef515b962f1fcb59c0c91620e5f166 135 Gene3D G3DSA:3.40.50.2300 3 133 8.4E-52 T 11-10-2018 ATC04_06670 17ef515b962f1fcb59c0c91620e5f166 135 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 127 1.0E-24 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ATC04_13645 6d26feeb6eb1d5a3bdbea3031a9ecb7a 258 Gene3D G3DSA:3.30.450.40 59 222 2.0E-37 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_13645 6d26feeb6eb1d5a3bdbea3031a9ecb7a 258 SMART SM00346 1 78 7.2E-4 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_13645 6d26feeb6eb1d5a3bdbea3031a9ecb7a 258 SUPERFAMILY SSF46785 2 61 1.96E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_13645 6d26feeb6eb1d5a3bdbea3031a9ecb7a 258 Gene3D G3DSA:1.10.10.10 1 58 3.8E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_13645 6d26feeb6eb1d5a3bdbea3031a9ecb7a 258 SUPERFAMILY SSF55781 54 206 1.57E-34 T 11-10-2018 ATC04_13645 6d26feeb6eb1d5a3bdbea3031a9ecb7a 258 Pfam PF01614 Bacterial transcriptional regulator 109 206 2.9E-16 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ATC04_13645 6d26feeb6eb1d5a3bdbea3031a9ecb7a 258 Pfam PF09339 IclR helix-turn-helix domain 1 38 2.9E-6 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_09730 e3a772d5a692c06cd0119d8c8e659b9b 379 Gene3D G3DSA:1.10.540.10 5 112 2.5E-20 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_09730 e3a772d5a692c06cd0119d8c8e659b9b 379 SUPERFAMILY SSF47203 227 375 7.41E-16 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_09730 e3a772d5a692c06cd0119d8c8e659b9b 379 Gene3D G3DSA:1.20.140.10 227 372 4.5E-21 T 11-10-2018 ATC04_09730 e3a772d5a692c06cd0119d8c8e659b9b 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 85 5.3E-7 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_09730 e3a772d5a692c06cd0119d8c8e659b9b 379 SUPERFAMILY SSF56645 10 212 9.56E-32 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_09730 e3a772d5a692c06cd0119d8c8e659b9b 379 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 237 358 1.8E-11 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ATC04_09730 e3a772d5a692c06cd0119d8c8e659b9b 379 PIRSF PIRSF016578 2 378 3.1E-25 T 11-10-2018 ATC04_09730 e3a772d5a692c06cd0119d8c8e659b9b 379 Gene3D G3DSA:2.40.110.10 115 214 7.8E-16 T 11-10-2018 ATC04_12735 0f2ea4828a21249ba7ff6fbd02e1b2d7 303 PIRSF PIRSF001365 9 302 8.1E-79 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_12735 0f2ea4828a21249ba7ff6fbd02e1b2d7 303 Gene3D G3DSA:3.20.20.70 2 300 2.5E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_12735 0f2ea4828a21249ba7ff6fbd02e1b2d7 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 46 67 2.6E-27 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_12735 0f2ea4828a21249ba7ff6fbd02e1b2d7 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 114 130 2.6E-27 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_12735 0f2ea4828a21249ba7ff6fbd02e1b2d7 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 139 156 2.6E-27 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_12735 0f2ea4828a21249ba7ff6fbd02e1b2d7 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 82 100 2.6E-27 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_12735 0f2ea4828a21249ba7ff6fbd02e1b2d7 303 Pfam PF00701 Dihydrodipicolinate synthetase family 13 296 7.5E-76 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_12735 0f2ea4828a21249ba7ff6fbd02e1b2d7 303 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 16 294 1.3E-80 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_12735 0f2ea4828a21249ba7ff6fbd02e1b2d7 303 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 12 298 52.733 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATC04_12735 0f2ea4828a21249ba7ff6fbd02e1b2d7 303 SUPERFAMILY SSF51569 11 299 9.73E-84 T 11-10-2018 ATC04_12735 0f2ea4828a21249ba7ff6fbd02e1b2d7 303 SMART SM01130 12 300 2.7E-105 T 11-10-2018 IPR002220 DapA-like GO:0016829 ATC04_12735 0f2ea4828a21249ba7ff6fbd02e1b2d7 303 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 144 174 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 Gene3D G3DSA:3.30.390.30 332 450 1.6E-32 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 PIRSF PIRSF000350 1 430 3.0E-65 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 Gene3D G3DSA:3.50.50.60 138 251 3.1E-74 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 SUPERFAMILY SSF51905 2 355 4.21E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 33 43 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 332 441 1.9E-26 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 SUPERFAMILY SSF55424 332 443 4.3E-28 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 1.7E-17 T 11-10-2018 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 1.7E-17 T 11-10-2018 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 126 144 1.7E-17 T 11-10-2018 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 244 260 1.7E-17 T 11-10-2018 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 298 7.7E-42 T 11-10-2018 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 129 138 7.7E-42 T 11-10-2018 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 189 7.7E-42 T 11-10-2018 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 394 409 7.7E-42 T 11-10-2018 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 7.7E-42 T 11-10-2018 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 328 349 7.7E-42 T 11-10-2018 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 245 259 7.7E-42 T 11-10-2018 ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 Gene3D G3DSA:3.50.50.60 2 317 3.1E-74 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_04040 7201c9491afd0d292308eeb95aa1ba23 454 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 308 1.2E-39 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_00115 2389e8f81ae899f40127a2b085d119cd 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 131 1.4E-11 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_00115 2389e8f81ae899f40127a2b085d119cd 135 SUPERFAMILY SSF54593 7 133 2.55E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_00115 2389e8f81ae899f40127a2b085d119cd 135 Gene3D G3DSA:3.10.180.10 3 135 1.6E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_06565 d4d7ac0d42010cc82e5c3b744a2e7cab 255 TIGRFAM TIGR03843 TIGR03843: conserved hypothetical protein 8 255 2.8E-104 T 11-10-2018 IPR022292 Conserved hypothetical protein CHP03843 ATC04_06565 d4d7ac0d42010cc82e5c3b744a2e7cab 255 Pfam PF00454 Phosphatidylinositol 3- and 4-kinase 54 178 7.0E-6 T 11-10-2018 IPR000403 Phosphatidylinositol 3-/4-kinase, catalytic domain ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 SUPERFAMILY SSF47384 292 376 9.22E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 SMART SM00388 309 376 1.9E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 Gene3D G3DSA:1.20.1480.50 214 303 1.0E-13 T 11-10-2018 ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 511 6.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 6.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 530 6.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 486 6.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 Gene3D G3DSA:1.10.287.130 304 380 6.7E-20 T 11-10-2018 ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 SMART SM00304 249 301 1.7E-16 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 SUPERFAMILY SSF55874 365 538 1.51E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 Gene3D G3DSA:3.30.565.10 381 532 2.2E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 SUPERFAMILY SSF158472 249 300 2.75E-10 T 11-10-2018 ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 Pfam PF00672 HAMP domain 249 298 4.2E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 SMART SM00387 422 533 8.9E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 532 2.2E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_07210 dc430e1dc0223d71ea9d32a141131619 601 Pfam PF00512 His Kinase A (phospho-acceptor) domain 309 376 9.3E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_10195 cf8504c7f13ace2ff9a5afdc64bb3d9f 336 SMART SM00829 20 334 9.7E-9 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATC04_10195 cf8504c7f13ace2ff9a5afdc64bb3d9f 336 Gene3D G3DSA:3.90.180.10 17 334 5.9E-120 T 11-10-2018 ATC04_10195 cf8504c7f13ace2ff9a5afdc64bb3d9f 336 SUPERFAMILY SSF51735 128 302 7.19E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_10195 cf8504c7f13ace2ff9a5afdc64bb3d9f 336 SUPERFAMILY SSF50129 4 140 2.16E-30 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_10195 cf8504c7f13ace2ff9a5afdc64bb3d9f 336 Pfam PF00107 Zinc-binding dehydrogenase 160 284 1.5E-23 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATC04_10195 cf8504c7f13ace2ff9a5afdc64bb3d9f 336 Gene3D G3DSA:3.40.50.720 129 306 5.9E-120 T 11-10-2018 ATC04_10195 cf8504c7f13ace2ff9a5afdc64bb3d9f 336 Pfam PF16884 N-terminal domain of oxidoreductase 8 112 4.3E-36 T 11-10-2018 ATC04_04045 9a1b8521664cf9e3d7ca09b43abc02d0 100 PIRSF PIRSF017292 1 97 5.3E-35 T 11-10-2018 IPR016694 Protein of unknown function UCP017292, zinc finger, CHY-type ATC04_04045 9a1b8521664cf9e3d7ca09b43abc02d0 100 SUPERFAMILY SSF161219 2 82 4.58E-18 T 11-10-2018 IPR037274 Zinc finger, CHY-type superfamily GO:0008270 Reactome: R-HSA-110320|Reactome: R-HSA-983168 ATC04_04045 9a1b8521664cf9e3d7ca09b43abc02d0 100 Pfam PF05495 CHY zinc finger 7 80 1.2E-13 T 11-10-2018 IPR008913 Zinc finger, CHY-type GO:0008270 Reactome: R-HSA-110320|Reactome: R-HSA-983168 ATC04_08385 37e8fa2e969af6df8ec11afeafe546f6 560 Pfam PF00005 ABC transporter 21 190 3.0E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_08385 37e8fa2e969af6df8ec11afeafe546f6 560 Gene3D G3DSA:3.40.50.300 285 558 2.2E-62 T 11-10-2018 ATC04_08385 37e8fa2e969af6df8ec11afeafe546f6 560 SUPERFAMILY SSF52540 301 509 2.83E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08385 37e8fa2e969af6df8ec11afeafe546f6 560 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_08385 37e8fa2e969af6df8ec11afeafe546f6 560 Pfam PF12848 ABC transporter 229 300 2.1E-13 T 11-10-2018 IPR032781 ABC-transporter extension domain ATC04_08385 37e8fa2e969af6df8ec11afeafe546f6 560 Gene3D G3DSA:3.40.50.300 3 284 3.8E-77 T 11-10-2018 ATC04_08385 37e8fa2e969af6df8ec11afeafe546f6 560 SUPERFAMILY SSF52540 12 243 1.38E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08385 37e8fa2e969af6df8ec11afeafe546f6 560 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_08385 37e8fa2e969af6df8ec11afeafe546f6 560 SMART SM00382 30 237 2.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_08385 37e8fa2e969af6df8ec11afeafe546f6 560 SMART SM00382 348 522 1.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_08385 37e8fa2e969af6df8ec11afeafe546f6 560 Pfam PF00005 ABC transporter 340 473 4.4E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_08385 37e8fa2e969af6df8ec11afeafe546f6 560 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 557 1.5E-276 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 ATC04_09625 bb1291146ad0bfff7d7738e8bbf3610a 242 Gene3D G3DSA:3.90.550.10 1 240 2.4E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_09625 bb1291146ad0bfff7d7738e8bbf3610a 242 Pfam PF00535 Glycosyl transferase family 2 6 170 1.5E-29 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATC04_09625 bb1291146ad0bfff7d7738e8bbf3610a 242 SUPERFAMILY SSF53448 6 232 1.22E-44 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_10075 941d73973c249f8ec9f35825dd44a8ad 190 Pfam PF10067 Predicted membrane protein (DUF2306) 53 143 3.4E-17 T 11-10-2018 IPR018750 Protein of unknown function DUF2306, membrane ATC04_01685 9c7e9c791999ad2ebe12c7e512c2ce4d 270 SMART SM00346 23 113 2.6E-19 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_01685 9c7e9c791999ad2ebe12c7e512c2ce4d 270 Pfam PF09339 IclR helix-turn-helix domain 27 75 6.6E-13 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_01685 9c7e9c791999ad2ebe12c7e512c2ce4d 270 Gene3D G3DSA:1.10.10.10 23 84 5.1E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_01685 9c7e9c791999ad2ebe12c7e512c2ce4d 270 SUPERFAMILY SSF46785 26 92 7.81E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_01685 9c7e9c791999ad2ebe12c7e512c2ce4d 270 Gene3D G3DSA:3.30.450.40 96 268 2.0E-48 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_01685 9c7e9c791999ad2ebe12c7e512c2ce4d 270 Pfam PF01614 Bacterial transcriptional regulator 144 262 2.8E-16 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ATC04_01685 9c7e9c791999ad2ebe12c7e512c2ce4d 270 SUPERFAMILY SSF55781 81 266 4.32E-36 T 11-10-2018 ATC04_03525 91ca27bff204835964be314b2d3ad14d 444 Gene3D G3DSA:1.20.1250.20 20 440 8.1E-61 T 11-10-2018 ATC04_03525 91ca27bff204835964be314b2d3ad14d 444 Pfam PF00083 Sugar (and other) transporter 26 408 5.1E-23 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_03525 91ca27bff204835964be314b2d3ad14d 444 SUPERFAMILY SSF103473 22 430 9.68E-61 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_16830 a270fa3a67e5e10a760d383a287cd355 506 Pfam PF00474 Sodium:solute symporter family 33 430 1.2E-32 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ATC04_16830 a270fa3a67e5e10a760d383a287cd355 506 Gene3D G3DSA:1.20.1730.10 23 497 1.6E-69 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily ATC04_11885 fa0626fee879934a0acf851a4adf010a 332 Gene3D G3DSA:3.40.50.2300 52 303 3.0E-88 T 11-10-2018 ATC04_11885 fa0626fee879934a0acf851a4adf010a 332 Pfam PF04392 ABC transporter substrate binding protein 41 330 9.1E-88 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein ATC04_11885 fa0626fee879934a0acf851a4adf010a 332 Gene3D G3DSA:3.40.50.2300 155 324 3.0E-88 T 11-10-2018 ATC04_11885 fa0626fee879934a0acf851a4adf010a 332 SUPERFAMILY SSF53822 46 300 1.15E-21 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ATC04_02055 f09b5af3f9dc27f6ef47753606bfdc8b 227 Gene3D G3DSA:1.10.10.10 132 227 1.6E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_02055 f09b5af3f9dc27f6ef47753606bfdc8b 227 Pfam PF00072 Response regulator receiver domain 2 111 8.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_02055 f09b5af3f9dc27f6ef47753606bfdc8b 227 SUPERFAMILY SSF46894 130 222 1.11E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_02055 f09b5af3f9dc27f6ef47753606bfdc8b 227 SUPERFAMILY SSF52172 2 125 4.41E-37 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_02055 f09b5af3f9dc27f6ef47753606bfdc8b 227 SMART SM00862 151 222 9.4E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_02055 f09b5af3f9dc27f6ef47753606bfdc8b 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 222 6.8E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_02055 f09b5af3f9dc27f6ef47753606bfdc8b 227 Gene3D G3DSA:3.40.50.2300 1 130 5.2E-32 T 11-10-2018 ATC04_02055 f09b5af3f9dc27f6ef47753606bfdc8b 227 SMART SM00448 1 111 3.0E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_00330 9a8ee2567028d6165c2ef29891fa9b06 450 Gene3D G3DSA:3.90.1300.10 2 450 8.7E-107 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ATC04_00330 9a8ee2567028d6165c2ef29891fa9b06 450 ProSitePatterns PS00571 Amidases signature. 149 180 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 ATC04_00330 9a8ee2567028d6165c2ef29891fa9b06 450 SUPERFAMILY SSF75304 3 448 2.09E-99 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ATC04_00330 9a8ee2567028d6165c2ef29891fa9b06 450 Pfam PF01425 Amidase 22 442 5.7E-83 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ATC04_01695 3ceec7da3260b492098eed8ea9637f0b 454 SUPERFAMILY SSF103473 26 451 6.15E-73 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_01695 3ceec7da3260b492098eed8ea9637f0b 454 Gene3D G3DSA:1.20.1250.20 38 454 5.9E-69 T 11-10-2018 ATC04_01695 3ceec7da3260b492098eed8ea9637f0b 454 ProSitePatterns PS00216 Sugar transport proteins signature 1. 321 338 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_01695 3ceec7da3260b492098eed8ea9637f0b 454 Pfam PF07690 Major Facilitator Superfamily 73 311 5.1E-26 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_13555 4556aff064c9baf78655159d9e9f20ad 137 Gene3D G3DSA:3.40.630.30 3 136 2.2E-30 T 11-10-2018 ATC04_13555 4556aff064c9baf78655159d9e9f20ad 137 Pfam PF00583 Acetyltransferase (GNAT) family 23 123 4.9E-14 T 11-10-2018 IPR000182 GNAT domain ATC04_13555 4556aff064c9baf78655159d9e9f20ad 137 SUPERFAMILY SSF55729 1 127 6.69E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_10815 0623c73d3d6a96ac54f0f07a673a13a7 319 SUPERFAMILY SSF53098 133 316 1.77E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_10815 0623c73d3d6a96ac54f0f07a673a13a7 319 Pfam PF13011 leucine-zipper of insertion element IS481 1 82 6.1E-18 T 11-10-2018 IPR024967 DNA-binding domain, IS481-type ATC04_10815 0623c73d3d6a96ac54f0f07a673a13a7 319 Gene3D G3DSA:3.30.420.10 168 319 3.0E-23 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_10815 0623c73d3d6a96ac54f0f07a673a13a7 319 Pfam PF00665 Integrase core domain 131 273 3.3E-32 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_10815 0623c73d3d6a96ac54f0f07a673a13a7 319 SUPERFAMILY SSF46689 21 83 2.51E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_16085 5b6b0222eb828e11188988223ad00465 467 Pfam PF00206 Lyase 97 309 1.4E-28 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal ATC04_16085 5b6b0222eb828e11188988223ad00465 467 PRINTS PR00149 Fumarate lyase superfamily signature 150 168 7.6E-12 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_16085 5b6b0222eb828e11188988223ad00465 467 PRINTS PR00149 Fumarate lyase superfamily signature 105 123 7.6E-12 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_16085 5b6b0222eb828e11188988223ad00465 467 PRINTS PR00149 Fumarate lyase superfamily signature 288 304 7.6E-12 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_16085 5b6b0222eb828e11188988223ad00465 467 ProSitePatterns PS00163 Fumarate lyases signature. 288 297 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ATC04_16085 5b6b0222eb828e11188988223ad00465 467 SMART SM00998 377 453 0.0037 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATC04_16085 5b6b0222eb828e11188988223ad00465 467 Gene3D G3DSA:1.20.200.30 1 369 5.5E-101 T 11-10-2018 ATC04_16085 5b6b0222eb828e11188988223ad00465 467 SUPERFAMILY SSF48557 10 454 4.4E-75 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 ATC04_16085 5b6b0222eb828e11188988223ad00465 467 Gene3D G3DSA:1.10.40.30 377 458 2.0E-6 T 11-10-2018 ATC04_05395 18c0823d14decee9f85dfb640bd1987c 707 Pfam PF00171 Aldehyde dehydrogenase family 20 511 4.3E-55 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_05395 18c0823d14decee9f85dfb640bd1987c 707 Gene3D G3DSA:3.40.605.10 15 500 1.0E-138 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_05395 18c0823d14decee9f85dfb640bd1987c 707 Pfam PF01575 MaoC like domain 572 660 2.0E-16 T 11-10-2018 IPR002539 MaoC-like dehydratase domain ATC04_05395 18c0823d14decee9f85dfb640bd1987c 707 SUPERFAMILY SSF54637 552 699 1.73E-28 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_05395 18c0823d14decee9f85dfb640bd1987c 707 SUPERFAMILY SSF53720 8 516 1.17E-76 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_05395 18c0823d14decee9f85dfb640bd1987c 707 Gene3D G3DSA:3.10.129.10 555 705 1.1E-33 T 11-10-2018 ATC04_05395 18c0823d14decee9f85dfb640bd1987c 707 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 9 697 0.0 T 11-10-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 ATC04_05395 18c0823d14decee9f85dfb640bd1987c 707 Gene3D G3DSA:3.40.309.10 265 488 1.0E-138 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_06250 700df94a5a45676cd3199c20c071a25b 333 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 218 1.2E-18 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06250 700df94a5a45676cd3199c20c071a25b 333 Gene3D G3DSA:1.10.150.20 221 321 6.4E-28 T 11-10-2018 ATC04_06250 700df94a5a45676cd3199c20c071a25b 333 SUPERFAMILY SSF56553 48 169 4.06E-41 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06250 700df94a5a45676cd3199c20c071a25b 333 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 3 311 33.926 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06250 700df94a5a45676cd3199c20c071a25b 333 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 57 150 1.3E-22 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06250 700df94a5a45676cd3199c20c071a25b 333 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 19 310 1.2E-113 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06250 700df94a5a45676cd3199c20c071a25b 333 SUPERFAMILY SSF47789 248 316 1.7E-23 T 11-10-2018 ATC04_06250 700df94a5a45676cd3199c20c071a25b 333 Gene3D G3DSA:3.30.1360.10 14 216 6.3E-81 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06250 700df94a5a45676cd3199c20c071a25b 333 Gene3D G3DSA:2.170.120.12 48 168 6.3E-81 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06250 700df94a5a45676cd3199c20c071a25b 333 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 302 2.2E-25 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06250 700df94a5a45676cd3199c20c071a25b 333 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 250 316 4.0E-29 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06250 700df94a5a45676cd3199c20c071a25b 333 SMART SM00662 18 225 2.3E-90 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_06250 700df94a5a45676cd3199c20c071a25b 333 SUPERFAMILY SSF55257 15 224 2.35E-25 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_17380 2d5e82058682534c6bdf1b6fbf5bbc0a 195 Gene3D G3DSA:3.40.50.1820 1 195 4.2E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_17380 2d5e82058682534c6bdf1b6fbf5bbc0a 195 SUPERFAMILY SSF53474 3 193 1.69E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_17380 2d5e82058682534c6bdf1b6fbf5bbc0a 195 Pfam PF01738 Dienelactone hydrolase family 3 193 4.2E-9 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 ATC04_02225 a25328925cb7ef242c5dfcebac56504c 337 Pfam PF02371 Transposase IS116/IS110/IS902 family 222 303 5.2E-15 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 ATC04_02225 a25328925cb7ef242c5dfcebac56504c 337 Pfam PF01548 Transposase 1 152 9.8E-16 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 ATC04_07540 fd6b9ad414a3e1c9d1709411671b3666 341 PIRSF PIRSF000267 1 336 1.8E-109 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ATC04_07540 fd6b9ad414a3e1c9d1709411671b3666 341 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 321 7.0E-99 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ATC04_07540 fd6b9ad414a3e1c9d1709411671b3666 341 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 2 214 2.4E-57 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ATC04_11700 08931a174dc9d57b068e4e99e60582c8 240 Pfam PF06197 Protein of unknown function (DUF998) 25 215 6.5E-17 T 11-10-2018 IPR009339 Protein of unknown function DUF998 ATC04_10000 d2edc012b42d258cede1b09ea20e3b56 533 Gene3D G3DSA:3.40.50.300 9 283 1.5E-54 T 11-10-2018 ATC04_10000 d2edc012b42d258cede1b09ea20e3b56 533 Pfam PF00005 ABC transporter 18 187 1.2E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_10000 d2edc012b42d258cede1b09ea20e3b56 533 SUPERFAMILY SSF52540 330 517 1.24E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10000 d2edc012b42d258cede1b09ea20e3b56 533 SUPERFAMILY SSF52540 2 234 3.25E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10000 d2edc012b42d258cede1b09ea20e3b56 533 Pfam PF12848 ABC transporter 230 307 8.4E-9 T 11-10-2018 IPR032781 ABC-transporter extension domain ATC04_10000 d2edc012b42d258cede1b09ea20e3b56 533 Pfam PF00005 ABC transporter 342 472 3.9E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_10000 d2edc012b42d258cede1b09ea20e3b56 533 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_10000 d2edc012b42d258cede1b09ea20e3b56 533 SMART SM00382 26 232 4.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_10000 d2edc012b42d258cede1b09ea20e3b56 533 SMART SM00382 350 518 1.3E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_10000 d2edc012b42d258cede1b09ea20e3b56 533 Gene3D G3DSA:3.40.50.300 289 530 1.3E-54 T 11-10-2018 ATC04_10000 d2edc012b42d258cede1b09ea20e3b56 533 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_11530 07276cfaa7c6db7e07a51186a3f5be43 247 SUPERFAMILY SSF48498 94 233 2.67E-12 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_11530 07276cfaa7c6db7e07a51186a3f5be43 247 ProSitePatterns PS00354 HMG-I and HMG-Y DNA-binding domain (A+T-hook). 11 22 - T 11-10-2018 IPR000637 HMG-I/HMG-Y, DNA-binding, conserved site GO:0006355 ATC04_11530 07276cfaa7c6db7e07a51186a3f5be43 247 Gene3D G3DSA:1.10.357.10 9 244 1.6E-31 T 11-10-2018 ATC04_11530 07276cfaa7c6db7e07a51186a3f5be43 247 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 96 231 5.3E-10 T 11-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 ATC04_11530 07276cfaa7c6db7e07a51186a3f5be43 247 SUPERFAMILY SSF46689 28 85 1.9E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_14920 d9ff8866734a64ef50cd15de119de9f4 269 Gene3D G3DSA:3.40.1640.10 25 256 1.3E-90 T 11-10-2018 ATC04_14920 d9ff8866734a64ef50cd15de119de9f4 269 SUPERFAMILY SSF160920 14 262 2.75E-109 T 11-10-2018 IPR038021 Putative hydro-lyase ATC04_14920 d9ff8866734a64ef50cd15de119de9f4 269 Hamap MF_01830 Putative hydro-lyase . 16 268 50.876 T 11-10-2018 IPR016938 Uncharacterised protein family UPF0317 ATC04_14920 d9ff8866734a64ef50cd15de119de9f4 269 PIRSF PIRSF029755 4 269 2.5E-115 T 11-10-2018 IPR016938 Uncharacterised protein family UPF0317 ATC04_14920 d9ff8866734a64ef50cd15de119de9f4 269 Pfam PF07286 Protein of unknown function (DUF1445) 118 260 5.6E-65 T 11-10-2018 IPR009906 D-glutamate cyclase ATC04_14920 d9ff8866734a64ef50cd15de119de9f4 269 Gene3D G3DSA:3.30.2040.10 128 240 1.3E-90 T 11-10-2018 ATC04_03105 1bbb949d0539f5fd96e18cef15575870 166 Pfam PF04306 Protein of unknown function (DUF456) 23 158 2.4E-25 T 11-10-2018 IPR007403 Protein of unknown function DUF456 ATC04_12915 f25a59c35d2113e140ed33e897676c45 399 SUPERFAMILY SSF48264 14 396 1.57E-75 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_12915 f25a59c35d2113e140ed33e897676c45 399 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 340 349 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 ATC04_12915 f25a59c35d2113e140ed33e897676c45 399 PRINTS PR00463 E-class P450 group I signature 337 347 1.4E-6 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_12915 f25a59c35d2113e140ed33e897676c45 399 PRINTS PR00463 E-class P450 group I signature 347 370 1.4E-6 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_12915 f25a59c35d2113e140ed33e897676c45 399 PRINTS PR00463 E-class P450 group I signature 225 242 1.4E-6 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_12915 f25a59c35d2113e140ed33e897676c45 399 PRINTS PR00385 P450 superfamily signature 271 282 2.0E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_12915 f25a59c35d2113e140ed33e897676c45 399 PRINTS PR00385 P450 superfamily signature 338 347 2.0E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_12915 f25a59c35d2113e140ed33e897676c45 399 PRINTS PR00385 P450 superfamily signature 347 358 2.0E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_12915 f25a59c35d2113e140ed33e897676c45 399 PRINTS PR00385 P450 superfamily signature 236 253 2.0E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_12915 f25a59c35d2113e140ed33e897676c45 399 Pfam PF00067 Cytochrome P450 221 372 1.2E-25 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_12915 f25a59c35d2113e140ed33e897676c45 399 Gene3D G3DSA:1.10.630.10 2 399 1.2E-91 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_06125 b28988522a6d9b759f69d4129686cfc2 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 5.7E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06125 b28988522a6d9b759f69d4129686cfc2 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 5.7E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06125 b28988522a6d9b759f69d4129686cfc2 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 5.7E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06125 b28988522a6d9b759f69d4129686cfc2 93 PIRSF PIRSF002144 1 93 7.5E-30 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06125 b28988522a6d9b759f69d4129686cfc2 93 Gene3D G3DSA:3.30.860.10 1 93 1.6E-38 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06125 b28988522a6d9b759f69d4129686cfc2 93 Pfam PF00203 Ribosomal protein S19 3 83 2.2E-34 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06125 b28988522a6d9b759f69d4129686cfc2 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 3.8E-46 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 ATC04_06125 b28988522a6d9b759f69d4129686cfc2 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06125 b28988522a6d9b759f69d4129686cfc2 93 SUPERFAMILY SSF54570 3 84 1.1E-33 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06125 b28988522a6d9b759f69d4129686cfc2 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.477 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_15945 dd441464cd3787fb10945adddbe149e8 268 SUPERFAMILY SSF161098 18 256 1.83E-51 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_15945 dd441464cd3787fb10945adddbe149e8 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 256 8.9E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_15945 dd441464cd3787fb10945adddbe149e8 268 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 54 262 1.3E-60 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 ATC04_15945 dd441464cd3787fb10945adddbe149e8 268 TIGRFAM TIGR01581 Mo_ABC_porter: NifC-like ABC-type porter 31 257 4.2E-68 T 11-10-2018 IPR006469 NifC-like ABC-type porter GO:0005215|GO:0016020|GO:0055085 ATC04_15945 dd441464cd3787fb10945adddbe149e8 268 Gene3D G3DSA:1.10.3720.10 11 264 6.3E-63 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_14845 e254c0eb873b6d7b69807484c6447fc0 224 Gene3D G3DSA:1.10.10.10 9 78 1.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_14845 e254c0eb873b6d7b69807484c6447fc0 224 SMART SM00895 86 210 1.4E-16 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_14845 e254c0eb873b6d7b69807484c6447fc0 224 SUPERFAMILY SSF46785 9 80 6.19E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_14845 e254c0eb873b6d7b69807484c6447fc0 224 SUPERFAMILY SSF48008 82 215 2.48E-28 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_14845 e254c0eb873b6d7b69807484c6447fc0 224 Gene3D G3DSA:1.20.120.530 80 217 1.3E-28 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_14845 e254c0eb873b6d7b69807484c6447fc0 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 3.8E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_14845 e254c0eb873b6d7b69807484c6447fc0 224 Pfam PF07729 FCD domain 86 209 1.6E-23 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_14845 e254c0eb873b6d7b69807484c6447fc0 224 SMART SM00345 18 76 8.6E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_08900 0e1c4b836e60cf313587f2463581a8e0 272 Pfam PF13622 Thioesterase-like superfamily 36 268 1.6E-29 T 11-10-2018 ATC04_08900 0e1c4b836e60cf313587f2463581a8e0 272 Gene3D G3DSA:3.10.129.90 22 260 1.7E-13 T 11-10-2018 ATC04_08900 0e1c4b836e60cf313587f2463581a8e0 272 SUPERFAMILY SSF54637 150 260 4.05E-6 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_17635 65fa6c4da3c6f1743340952e4a480b23 417 Pfam PF01844 HNH endonuclease 139 191 1.6E-4 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 ATC04_17635 65fa6c4da3c6f1743340952e4a480b23 417 Gene3D G3DSA:3.30.40.60 86 201 8.9E-6 T 11-10-2018 ATC04_02085 58b85d136c82bf8949dc422d4024119c 349 Pfam PF00571 CBS domain 227 268 5.4E-5 T 11-10-2018 IPR000644 CBS domain ATC04_02085 58b85d136c82bf8949dc422d4024119c 349 Pfam PF00571 CBS domain 291 335 0.0032 T 11-10-2018 IPR000644 CBS domain ATC04_02085 58b85d136c82bf8949dc422d4024119c 349 SMART SM00116 226 272 0.044 T 11-10-2018 IPR000644 CBS domain ATC04_02085 58b85d136c82bf8949dc422d4024119c 349 SMART SM00116 286 335 12.0 T 11-10-2018 IPR000644 CBS domain ATC04_02085 58b85d136c82bf8949dc422d4024119c 349 Gene3D G3DSA:3.10.580.10 199 342 3.8E-26 T 11-10-2018 ATC04_02085 58b85d136c82bf8949dc422d4024119c 349 SUPERFAMILY SSF54631 209 341 1.89E-18 T 11-10-2018 ATC04_02085 58b85d136c82bf8949dc422d4024119c 349 Pfam PF01595 Domain of unknown function DUF21 8 200 4.6E-38 T 11-10-2018 IPR002550 CNNM, transmembrane domain ATC04_05435 46351ed48d5fc57fc1862a8d980b6cb8 245 SMART SM00382 31 218 3.3E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_05435 46351ed48d5fc57fc1862a8d980b6cb8 245 PIRSF PIRSF039085 3 245 2.0E-116 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ATC04_05435 46351ed48d5fc57fc1862a8d980b6cb8 245 Gene3D G3DSA:3.40.50.300 6 245 6.5E-85 T 11-10-2018 ATC04_05435 46351ed48d5fc57fc1862a8d980b6cb8 245 SUPERFAMILY SSF52540 7 240 8.57E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_05435 46351ed48d5fc57fc1862a8d980b6cb8 245 Pfam PF00005 ABC transporter 22 170 3.3E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_05435 46351ed48d5fc57fc1862a8d980b6cb8 245 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_00145 eddc70b58bacfa0c3a1b255b55c29e0c 653 Pfam PF05649 Peptidase family M13 14 392 1.1E-86 T 11-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 ATC04_00145 eddc70b58bacfa0c3a1b255b55c29e0c 653 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 454 466 2.1E-19 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATC04_00145 eddc70b58bacfa0c3a1b255b55c29e0c 653 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 475 491 2.1E-19 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATC04_00145 eddc70b58bacfa0c3a1b255b55c29e0c 653 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 548 559 2.1E-19 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATC04_00145 eddc70b58bacfa0c3a1b255b55c29e0c 653 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 436 448 2.1E-19 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATC04_00145 eddc70b58bacfa0c3a1b255b55c29e0c 653 SUPERFAMILY SSF55486 4 653 9.52E-197 T 11-10-2018 ATC04_00145 eddc70b58bacfa0c3a1b255b55c29e0c 653 Pfam PF01431 Peptidase family M13 444 650 1.1E-67 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATC04_00145 eddc70b58bacfa0c3a1b255b55c29e0c 653 Gene3D G3DSA:3.40.390.10 9 653 1.2E-217 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 ATC04_00145 eddc70b58bacfa0c3a1b255b55c29e0c 653 Gene3D G3DSA:1.10.1380.10 40 431 1.2E-217 T 11-10-2018 ATC04_02855 a97c6b13371835e20de9e63d21186194 225 Gene3D G3DSA:3.30.450.40 160 225 6.4E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_02855 a97c6b13371835e20de9e63d21186194 225 SUPERFAMILY SSF46785 14 84 9.89E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_02855 a97c6b13371835e20de9e63d21186194 225 SUPERFAMILY SSF55781 76 222 1.18E-18 T 11-10-2018 ATC04_02855 a97c6b13371835e20de9e63d21186194 225 Pfam PF09339 IclR helix-turn-helix domain 16 64 4.2E-12 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_02855 a97c6b13371835e20de9e63d21186194 225 Gene3D G3DSA:1.10.10.10 12 84 1.3E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_02855 a97c6b13371835e20de9e63d21186194 225 Gene3D G3DSA:3.30.450.40 85 159 1.0E-9 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_02855 a97c6b13371835e20de9e63d21186194 225 SMART SM00346 13 100 2.2E-16 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_16895 aa3fc6d2bfe8d321eaf53aed90eeb50c 253 Gene3D G3DSA:3.40.50.880 2 241 1.8E-49 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_16895 aa3fc6d2bfe8d321eaf53aed90eeb50c 253 Pfam PF07722 Peptidase C26 52 215 7.3E-41 T 11-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 ATC04_16895 aa3fc6d2bfe8d321eaf53aed90eeb50c 253 SUPERFAMILY SSF52317 31 220 1.33E-31 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_03850 6a14bdf7148f2881791c35ecc66b3f71 256 Gene3D G3DSA:3.40.1410.10 80 243 1.2E-35 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ATC04_03850 6a14bdf7148f2881791c35ecc66b3f71 256 SUPERFAMILY SSF64288 60 236 1.88E-37 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ATC04_03850 6a14bdf7148f2881791c35ecc66b3f71 256 SMART SM00345 13 72 1.4E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03850 6a14bdf7148f2881791c35ecc66b3f71 256 SUPERFAMILY SSF46785 5 74 1.13E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03850 6a14bdf7148f2881791c35ecc66b3f71 256 Gene3D G3DSA:1.10.10.10 2 79 9.1E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03850 6a14bdf7148f2881791c35ecc66b3f71 256 Pfam PF07702 UTRA domain 94 228 6.1E-30 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ATC04_03850 6a14bdf7148f2881791c35ecc66b3f71 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 68 2.8E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03850 6a14bdf7148f2881791c35ecc66b3f71 256 SMART SM00866 93 232 3.8E-27 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ATC04_03850 6a14bdf7148f2881791c35ecc66b3f71 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.6E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03850 6a14bdf7148f2881791c35ecc66b3f71 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.6E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_10220 9cb2a30567048bda6821c481a8830a53 243 SMART SM00895 96 220 1.5E-16 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_10220 9cb2a30567048bda6821c481a8830a53 243 Pfam PF07729 FCD domain 97 219 5.3E-20 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_10220 9cb2a30567048bda6821c481a8830a53 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 67 1.5E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_10220 9cb2a30567048bda6821c481a8830a53 243 SUPERFAMILY SSF46785 3 71 1.42E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_10220 9cb2a30567048bda6821c481a8830a53 243 SUPERFAMILY SSF48008 94 227 6.02E-23 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_10220 9cb2a30567048bda6821c481a8830a53 243 Gene3D G3DSA:1.10.10.10 2 67 5.4E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_10220 9cb2a30567048bda6821c481a8830a53 243 SMART SM00345 9 67 0.0011 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_10220 9cb2a30567048bda6821c481a8830a53 243 Gene3D G3DSA:1.20.120.530 91 229 6.3E-23 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_11695 306a91804903b012981266963bbe7b9f 197 Gene3D G3DSA:3.40.50.850 2 195 1.8E-50 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ATC04_11695 306a91804903b012981266963bbe7b9f 197 Pfam PF00857 Isochorismatase family 4 195 2.1E-23 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 ATC04_11695 306a91804903b012981266963bbe7b9f 197 SUPERFAMILY SSF52499 2 195 2.22E-40 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ATC04_07730 b4c4ec582847d6ea2eb55e50637e930f 415 Gene3D G3DSA:1.10.150.80 327 415 7.5E-25 T 11-10-2018 ATC04_07730 b4c4ec582847d6ea2eb55e50637e930f 415 SMART SM00474 34 200 1.1E-31 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ATC04_07730 b4c4ec582847d6ea2eb55e50637e930f 415 Pfam PF00570 HRDC domain 243 309 3.7E-12 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 ATC04_07730 b4c4ec582847d6ea2eb55e50637e930f 415 Gene3D G3DSA:3.30.420.10 20 219 3.9E-68 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_07730 b4c4ec582847d6ea2eb55e50637e930f 415 Gene3D G3DSA:1.10.150.80 223 319 2.3E-21 T 11-10-2018 ATC04_07730 b4c4ec582847d6ea2eb55e50637e930f 415 SMART SM00341 239 319 9.4E-7 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 ATC04_07730 b4c4ec582847d6ea2eb55e50637e930f 415 SUPERFAMILY SSF47819 223 323 1.61E-17 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 ATC04_07730 b4c4ec582847d6ea2eb55e50637e930f 415 Pfam PF01612 3'-5' exonuclease 35 196 4.9E-31 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ATC04_07730 b4c4ec582847d6ea2eb55e50637e930f 415 SUPERFAMILY SSF53098 14 236 3.79E-49 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_01120 10625b362352c0aab98d7c0c4681a6ac 286 Pfam PF00892 EamA-like transporter family 131 258 3.1E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ATC04_01120 10625b362352c0aab98d7c0c4681a6ac 286 SUPERFAMILY SSF103481 31 123 2.75E-5 T 11-10-2018 ATC04_01120 10625b362352c0aab98d7c0c4681a6ac 286 SUPERFAMILY SSF103481 179 269 3.53E-8 T 11-10-2018 ATC04_15120 94693a6a10645bfb5e9ec2e33551bb56 514 Pfam PF07905 Purine catabolism regulatory protein-like family 26 120 4.0E-19 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain ATC04_15120 94693a6a10645bfb5e9ec2e33551bb56 514 Gene3D G3DSA:1.10.10.2840 388 512 1.1E-17 T 11-10-2018 ATC04_15120 94693a6a10645bfb5e9ec2e33551bb56 514 Pfam PF13556 PucR C-terminal helix-turn-helix domain 450 507 2.8E-18 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ATC04_18375 230f4876653267260d075305d75d3f0b 158 Gene3D G3DSA:1.10.10.10 1 148 7.5E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_18375 230f4876653267260d075305d75d3f0b 158 Pfam PF02082 Transcriptional regulator 1 81 4.7E-21 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ATC04_18375 230f4876653267260d075305d75d3f0b 158 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 47 65 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site ATC04_18375 230f4876653267260d075305d75d3f0b 158 SUPERFAMILY SSF46785 7 135 1.48E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_18375 230f4876653267260d075305d75d3f0b 158 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 136 2.1E-26 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ATC04_13070 cf05b6b085f7bea6c1d1bfe2747e5d6a 425 SUPERFAMILY SSF103473 17 421 7.19E-60 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_13070 cf05b6b085f7bea6c1d1bfe2747e5d6a 425 Pfam PF00083 Sugar (and other) transporter 23 225 9.4E-20 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_13070 cf05b6b085f7bea6c1d1bfe2747e5d6a 425 Gene3D G3DSA:1.20.1250.20 17 422 1.5E-52 T 11-10-2018 ATC04_13070 cf05b6b085f7bea6c1d1bfe2747e5d6a 425 Pfam PF07690 Major Facilitator Superfamily 283 416 3.9E-9 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_13350 f65f6fa3b6c696a32089594c6cb8fa04 240 Gene3D G3DSA:3.40.1160.10 3 240 1.4E-71 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ATC04_13350 f65f6fa3b6c696a32089594c6cb8fa04 240 PIRSF PIRSF005650 4 240 2.2E-86 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 ATC04_13350 f65f6fa3b6c696a32089594c6cb8fa04 240 Pfam PF00696 Amino acid kinase family 11 217 1.0E-26 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ATC04_13350 f65f6fa3b6c696a32089594c6cb8fa04 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 10 238 8.6E-88 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 ATC04_13350 f65f6fa3b6c696a32089594c6cb8fa04 240 SUPERFAMILY SSF53633 8 239 2.49E-65 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ATC04_13350 f65f6fa3b6c696a32089594c6cb8fa04 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 239 40.655 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 ATC04_03970 8ea5926a98cc1fb6a1868c70b3790e80 222 Gene3D G3DSA:2.60.120.590 15 221 4.2E-51 T 11-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily ATC04_03970 8ea5926a98cc1fb6a1868c70b3790e80 222 SUPERFAMILY SSF51197 17 218 2.47E-44 T 11-10-2018 ATC04_03970 8ea5926a98cc1fb6a1868c70b3790e80 222 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 21 217 4.3E-50 T 11-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like ATC04_11390 fd5c55a6f75ebc53062080ca33bc8c6c 378 TIGRFAM TIGR04036 LLM_CE1758_fam: putative luciferase-like monooxygenase, FMN-dependent, CE1758 family 1 355 6.8E-202 T 11-10-2018 IPR023934 Luciferase-like monooxygenase, FMN-dependent, putative ATC04_11390 fd5c55a6f75ebc53062080ca33bc8c6c 378 Pfam PF00296 Luciferase-like monooxygenase 1 293 2.4E-58 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ATC04_11390 fd5c55a6f75ebc53062080ca33bc8c6c 378 Gene3D G3DSA:3.20.20.30 1 343 1.0E-66 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_11390 fd5c55a6f75ebc53062080ca33bc8c6c 378 SUPERFAMILY SSF51679 1 333 1.44E-71 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_01035 01e15b60112a6c20c7fc1640a08eae46 238 Gene3D G3DSA:3.40.225.10 15 238 4.4E-60 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ATC04_01035 01e15b60112a6c20c7fc1640a08eae46 238 SMART SM01007 23 209 7.3E-58 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal ATC04_01035 01e15b60112a6c20c7fc1640a08eae46 238 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 26 207 1.6E-43 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal ATC04_01035 01e15b60112a6c20c7fc1640a08eae46 238 SUPERFAMILY SSF53639 14 233 5.3E-57 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ATC04_13580 0fe4e06d15ec194b90ca84691ae05584 267 Gene3D G3DSA:1.10.3720.10 1 255 5.3E-52 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_13580 0fe4e06d15ec194b90ca84691ae05584 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 252 6.4E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_13580 0fe4e06d15ec194b90ca84691ae05584 267 SUPERFAMILY SSF161098 3 267 1.4E-59 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 3.2E-28 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 3.2E-28 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.2E-28 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 3.2E-28 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 3.2E-28 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 Gene3D G3DSA:3.50.50.60 9 334 3.8E-99 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PIRSF PIRSF000350 1 476 4.6E-159 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 TIGRFAM TIGR02053 MerA: mercury(II) reductase 6 476 1.3E-165 T 11-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 4.1E-59 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 154 4.1E-59 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 4.1E-59 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 4.1E-59 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.1E-59 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 4.1E-59 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 4.1E-59 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 4.1E-59 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 4.1E-59 T 11-10-2018 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 Gene3D G3DSA:3.50.50.60 154 276 3.8E-99 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 SUPERFAMILY SSF55424 349 474 1.89E-29 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 Gene3D G3DSA:3.30.390.30 353 476 2.0E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 SUPERFAMILY SSF51905 1 341 7.06E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 459 3.7E-25 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ATC04_14790 a7f1d55d43ce3af76841963a71c6bdb3 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 333 8.4E-58 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_08360 a6105e72bf605e074c58861cba0060c9 405 SUPERFAMILY SSF103473 20 399 1.26E-31 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_08360 a6105e72bf605e074c58861cba0060c9 405 Gene3D G3DSA:1.20.1250.20 15 193 1.4E-6 T 11-10-2018 ATC04_08360 a6105e72bf605e074c58861cba0060c9 405 Gene3D G3DSA:1.20.1250.20 211 394 2.7E-19 T 11-10-2018 ATC04_08360 a6105e72bf605e074c58861cba0060c9 405 Pfam PF07690 Major Facilitator Superfamily 248 393 1.6E-9 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_15905 48f71ca3f987af0a4c82991dea2879aa 545 Gene3D G3DSA:1.10.3650.10 357 436 8.3E-23 T 11-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 ATC04_15905 48f71ca3f987af0a4c82991dea2879aa 545 Gene3D G3DSA:3.30.70.20 1 302 8.5E-95 T 11-10-2018 ATC04_15905 48f71ca3f987af0a4c82991dea2879aa 545 SUPERFAMILY SSF54862 1 487 4.4E-155 T 11-10-2018 ATC04_15905 48f71ca3f987af0a4c82991dea2879aa 545 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 484 4.4E-232 T 11-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 ATC04_15905 48f71ca3f987af0a4c82991dea2879aa 545 Pfam PF13247 4Fe-4S dicluster domain 174 269 6.4E-36 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ATC04_15905 48f71ca3f987af0a4c82991dea2879aa 545 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 357 437 2.6E-27 T 11-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 ATC04_06490 139925a407cffdfa6cfe2e8cf103ad5e 305 SUPERFAMILY SSF53850 42 299 3.47E-11 T 11-10-2018 ATC04_06490 139925a407cffdfa6cfe2e8cf103ad5e 305 Gene3D G3DSA:3.40.190.10 51 299 7.3E-8 T 11-10-2018 ATC04_06490 139925a407cffdfa6cfe2e8cf103ad5e 305 Gene3D G3DSA:3.40.190.120 146 246 7.3E-8 T 11-10-2018 ATC04_06490 139925a407cffdfa6cfe2e8cf103ad5e 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 42 299 9.6E-5 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 ATC04_01780 e8a4c496fd9210340da209f52563d596 476 Pfam PF00535 Glycosyl transferase family 2 120 285 2.7E-19 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATC04_01780 e8a4c496fd9210340da209f52563d596 476 Gene3D G3DSA:3.90.550.10 113 307 8.8E-27 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_01780 e8a4c496fd9210340da209f52563d596 476 SUPERFAMILY SSF53448 119 393 2.65E-37 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_01995 c355b8837660513e7ee7d8e3c2d92954 299 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 ATC04_01995 c355b8837660513e7ee7d8e3c2d92954 299 PIRSF PIRSF000103 1 294 3.4E-79 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 ATC04_01995 c355b8837660513e7ee7d8e3c2d92954 299 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 284 6.8E-36 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ATC04_01995 c355b8837660513e7ee7d8e3c2d92954 299 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 5 291 1.7E-112 T 11-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 ATC04_01995 c355b8837660513e7ee7d8e3c2d92954 299 SUPERFAMILY SSF48179 164 291 3.63E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_01995 c355b8837660513e7ee7d8e3c2d92954 299 SUPERFAMILY SSF51735 3 164 1.48E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01995 c355b8837660513e7ee7d8e3c2d92954 299 Gene3D G3DSA:3.40.50.720 1 163 9.5E-53 T 11-10-2018 ATC04_01995 c355b8837660513e7ee7d8e3c2d92954 299 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 2.5E-48 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ATC04_01995 c355b8837660513e7ee7d8e3c2d92954 299 Gene3D G3DSA:1.10.1040.10 164 293 8.7E-38 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATC04_07635 43246df80309e4cebc2a233e1438d153 434 Gene3D G3DSA:3.40.1090.10 1 135 7.9E-16 T 11-10-2018 ATC04_07635 43246df80309e4cebc2a233e1438d153 434 SUPERFAMILY SSF52151 2 216 4.45E-22 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ATC04_07635 43246df80309e4cebc2a233e1438d153 434 Pfam PF01734 Patatin-like phospholipase 5 173 1.1E-15 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ATC04_12465 0ddc546b7ffc8b042395400feea6ae81 167 Pfam PF01316 Arginine repressor, DNA binding domain 7 74 2.6E-22 T 11-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 ATC04_12465 0ddc546b7ffc8b042395400feea6ae81 167 PRINTS PR01467 Bacterial arginine repressor signature 26 39 1.3E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ATC04_12465 0ddc546b7ffc8b042395400feea6ae81 167 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.3E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ATC04_12465 0ddc546b7ffc8b042395400feea6ae81 167 PRINTS PR01467 Bacterial arginine repressor signature 133 148 1.3E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ATC04_12465 0ddc546b7ffc8b042395400feea6ae81 167 PRINTS PR01467 Bacterial arginine repressor signature 103 116 1.3E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ATC04_12465 0ddc546b7ffc8b042395400feea6ae81 167 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 107 142 5.0E-12 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 ATC04_12465 0ddc546b7ffc8b042395400feea6ae81 167 Gene3D G3DSA:1.10.10.10 1 77 3.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_12465 0ddc546b7ffc8b042395400feea6ae81 167 SUPERFAMILY SSF46785 6 73 5.44E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_12465 0ddc546b7ffc8b042395400feea6ae81 167 Hamap MF_00173 Arginine repressor [argR]. 1 167 53.556 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ATC04_12465 0ddc546b7ffc8b042395400feea6ae81 167 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 163 4.8E-39 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ATC04_12465 0ddc546b7ffc8b042395400feea6ae81 167 SUPERFAMILY SSF55252 96 162 5.36E-17 T 11-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 ATC04_12465 0ddc546b7ffc8b042395400feea6ae81 167 Pfam PF02863 Arginine repressor, C-terminal domain 96 160 8.5E-23 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 ATC04_12465 0ddc546b7ffc8b042395400feea6ae81 167 Gene3D G3DSA:3.30.1360.40 87 164 2.5E-26 T 11-10-2018 ATC04_18405 3e85582661d9e2073c181684d3c07987 79 SUPERFAMILY SSF52833 4 75 7.06E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_18405 3e85582661d9e2073c181684d3c07987 79 Gene3D G3DSA:3.40.30.10 2 79 3.9E-25 T 11-10-2018 ATC04_18405 3e85582661d9e2073c181684d3c07987 79 Pfam PF00462 Glutaredoxin 4 61 2.2E-13 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ATC04_18405 3e85582661d9e2073c181684d3c07987 79 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 4 75 3.3E-28 T 11-10-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 ATC04_00085 2b2ef46e737a6ce8e5d9b53543dbd04b 204 Pfam PF13411 MerR HTH family regulatory protein 9 68 2.9E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_00085 2b2ef46e737a6ce8e5d9b53543dbd04b 204 Pfam PF04255 Protein of unknown function (DUF433) 139 193 4.4E-11 T 11-10-2018 IPR007367 Protein of unknown function DUF433 ATC04_00085 2b2ef46e737a6ce8e5d9b53543dbd04b 204 SUPERFAMILY SSF46689 115 200 3.23E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_00085 2b2ef46e737a6ce8e5d9b53543dbd04b 204 Gene3D G3DSA:1.10.1660.10 7 74 3.8E-5 T 11-10-2018 ATC04_17715 2b2ef46e737a6ce8e5d9b53543dbd04b 204 Pfam PF13411 MerR HTH family regulatory protein 9 68 2.9E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_17715 2b2ef46e737a6ce8e5d9b53543dbd04b 204 Pfam PF04255 Protein of unknown function (DUF433) 139 193 4.4E-11 T 11-10-2018 IPR007367 Protein of unknown function DUF433 ATC04_17715 2b2ef46e737a6ce8e5d9b53543dbd04b 204 SUPERFAMILY SSF46689 115 200 3.23E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_17715 2b2ef46e737a6ce8e5d9b53543dbd04b 204 Gene3D G3DSA:1.10.1660.10 7 74 3.8E-5 T 11-10-2018 ATC04_14720 14165ac7f3ffd3de004e85c71afba160 324 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 34 277 8.1E-26 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ATC04_14720 14165ac7f3ffd3de004e85c71afba160 324 Gene3D G3DSA:1.20.1510.10 19 227 1.1E-27 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ATC04_14720 14165ac7f3ffd3de004e85c71afba160 324 SUPERFAMILY SSF161111 20 228 3.92E-33 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ATC04_14720 14165ac7f3ffd3de004e85c71afba160 324 Pfam PF01545 Cation efflux family 33 227 2.2E-23 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ATC04_12690 655b55cfa12a4595390c2c54f4587f90 303 Gene3D G3DSA:3.40.190.10 57 303 1.1E-76 T 11-10-2018 ATC04_12690 655b55cfa12a4595390c2c54f4587f90 303 Gene3D G3DSA:3.40.190.120 145 246 1.1E-76 T 11-10-2018 ATC04_12690 655b55cfa12a4595390c2c54f4587f90 303 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 45 299 1.7E-49 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 ATC04_12690 655b55cfa12a4595390c2c54f4587f90 303 SUPERFAMILY SSF53850 45 303 1.03E-49 T 11-10-2018 ATC04_15270 bedd2843f3d1105b44ace1aab143b3c6 232 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 65 133 5.5E-29 T 11-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 ATC04_15270 bedd2843f3d1105b44ace1aab143b3c6 232 SUPERFAMILY SSF50037 130 228 2.29E-18 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal ATC04_15270 bedd2843f3d1105b44ace1aab143b3c6 232 Gene3D G3DSA:1.10.10.10 1 73 6.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_15270 bedd2843f3d1105b44ace1aab143b3c6 232 Gene3D G3DSA:1.10.60.10 74 139 2.2E-28 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 ATC04_15270 bedd2843f3d1105b44ace1aab143b3c6 232 SMART SM00529 26 125 1.4E-40 T 11-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 ATC04_15270 bedd2843f3d1105b44ace1aab143b3c6 232 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 62 8.4E-19 T 11-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 ATC04_15270 bedd2843f3d1105b44ace1aab143b3c6 232 Pfam PF04023 FeoA domain 167 228 9.1E-5 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ATC04_15270 bedd2843f3d1105b44ace1aab143b3c6 232 SUPERFAMILY SSF47979 65 135 1.57E-26 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 ATC04_15270 bedd2843f3d1105b44ace1aab143b3c6 232 SUPERFAMILY SSF46785 3 62 7.13E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_15270 bedd2843f3d1105b44ace1aab143b3c6 232 Gene3D G3DSA:2.30.30.90 157 229 1.6E-5 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain ATC04_08165 c7fe4933cc302dcb6f5f85eb6bf7a3bc 956 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_08165 c7fe4933cc302dcb6f5f85eb6bf7a3bc 956 Hamap MF_00205 UvrABC system protein A [uvrA]. 12 956 22.513 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 ATC04_08165 c7fe4933cc302dcb6f5f85eb6bf7a3bc 956 Gene3D G3DSA:1.20.1580.10 708 846 6.1E-143 T 11-10-2018 ATC04_08165 c7fe4933cc302dcb6f5f85eb6bf7a3bc 956 SUPERFAMILY SSF52540 21 586 2.17E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08165 c7fe4933cc302dcb6f5f85eb6bf7a3bc 956 Gene3D G3DSA:3.40.50.300 16 612 1.6E-253 T 11-10-2018 ATC04_08165 c7fe4933cc302dcb6f5f85eb6bf7a3bc 956 ProSitePatterns PS00211 ABC transporters family signature. 846 860 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_08165 c7fe4933cc302dcb6f5f85eb6bf7a3bc 956 Gene3D G3DSA:3.30.190.20 141 253 1.6E-253 T 11-10-2018 ATC04_08165 c7fe4933cc302dcb6f5f85eb6bf7a3bc 956 SUPERFAMILY SSF52540 634 930 2.08E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08165 c7fe4933cc302dcb6f5f85eb6bf7a3bc 956 Gene3D G3DSA:1.20.1580.10 101 509 1.6E-253 T 11-10-2018 ATC04_08165 c7fe4933cc302dcb6f5f85eb6bf7a3bc 956 Gene3D G3DSA:1.10.8.280 302 420 1.6E-253 T 11-10-2018 ATC04_08165 c7fe4933cc302dcb6f5f85eb6bf7a3bc 956 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 15 941 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 ATC04_08165 c7fe4933cc302dcb6f5f85eb6bf7a3bc 956 Pfam PF00005 ABC transporter 640 876 2.6E-11 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_08165 c7fe4933cc302dcb6f5f85eb6bf7a3bc 956 Gene3D G3DSA:3.40.50.300 633 952 6.1E-143 T 11-10-2018 ATC04_03760 3a15446a0b7863682735f1c825dce445 290 Gene3D G3DSA:3.40.50.620 1 139 1.8E-8 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_03760 3a15446a0b7863682735f1c825dce445 290 SUPERFAMILY SSF52402 2 138 2.26E-8 T 11-10-2018 ATC04_03760 3a15446a0b7863682735f1c825dce445 290 Pfam PF00582 Universal stress protein family 2 138 1.5E-7 T 11-10-2018 IPR006016 UspA ATC04_03760 3a15446a0b7863682735f1c825dce445 290 Gene3D G3DSA:3.40.50.620 141 283 1.4E-7 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_03760 3a15446a0b7863682735f1c825dce445 290 SUPERFAMILY SSF52402 159 284 8.37E-10 T 11-10-2018 ATC04_14215 9b7dee20b65756ad3770889990cf6ddd 386 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 5 364 2.6E-110 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 ATC04_14215 9b7dee20b65756ad3770889990cf6ddd 386 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 5 361 37.732 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 ATC04_14215 9b7dee20b65756ad3770889990cf6ddd 386 SUPERFAMILY SSF52440 3 97 1.09E-23 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ATC04_14215 9b7dee20b65756ad3770889990cf6ddd 386 Gene3D G3DSA:3.30.470.20 106 358 1.8E-88 T 11-10-2018 ATC04_14215 9b7dee20b65756ad3770889990cf6ddd 386 Pfam PF02222 ATP-grasp domain 111 282 3.3E-49 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ATC04_14215 9b7dee20b65756ad3770889990cf6ddd 386 SUPERFAMILY SSF51246 308 378 2.51E-13 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ATC04_14215 9b7dee20b65756ad3770889990cf6ddd 386 Gene3D G3DSA:3.40.50.20 2 105 1.8E-29 T 11-10-2018 ATC04_14215 9b7dee20b65756ad3770889990cf6ddd 386 SUPERFAMILY SSF56059 102 303 5.48E-57 T 11-10-2018 ATC04_14215 9b7dee20b65756ad3770889990cf6ddd 386 Gene3D G3DSA:3.30.1490.20 117 180 1.8E-88 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ATC04_00685 6c2ea8b17ad7528f686c6f06e3b52b4a 300 SMART SM00470 36 129 1.4E-30 T 11-10-2018 IPR003115 ParB/Sulfiredoxin ATC04_00685 6c2ea8b17ad7528f686c6f06e3b52b4a 300 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 34 215 5.0E-60 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 ATC04_00685 6c2ea8b17ad7528f686c6f06e3b52b4a 300 Pfam PF02195 ParB-like nuclease domain 37 128 1.2E-23 T 11-10-2018 IPR003115 ParB/Sulfiredoxin ATC04_00685 6c2ea8b17ad7528f686c6f06e3b52b4a 300 Gene3D G3DSA:1.10.10.2830 116 229 6.7E-33 T 11-10-2018 ATC04_00685 6c2ea8b17ad7528f686c6f06e3b52b4a 300 SUPERFAMILY SSF110849 24 132 3.49E-29 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily ATC04_00685 6c2ea8b17ad7528f686c6f06e3b52b4a 300 SUPERFAMILY SSF109709 121 229 3.27E-31 T 11-10-2018 ATC04_00685 6c2ea8b17ad7528f686c6f06e3b52b4a 300 Gene3D G3DSA:3.90.1530.30 49 115 5.7E-27 T 11-10-2018 ATC04_17300 8dc60b49317104b08a191345a2f156ca 92 Gene3D G3DSA:1.20.58.1000 1 88 9.5E-22 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily ATC04_17300 8dc60b49317104b08a191345a2f156ca 92 Pfam PF02583 Metal-sensitive transcriptional repressor 9 88 1.5E-23 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 ATC04_09750 0a935b32159e2637e18f5b714b1e6e67 221 Gene3D G3DSA:3.40.50.2300 2 122 1.1E-28 T 11-10-2018 ATC04_09750 0a935b32159e2637e18f5b714b1e6e67 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 216 4.1E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_09750 0a935b32159e2637e18f5b714b1e6e67 221 SMART SM00448 1 109 5.9E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_09750 0a935b32159e2637e18f5b714b1e6e67 221 Pfam PF00072 Response regulator receiver domain 4 110 1.3E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_09750 0a935b32159e2637e18f5b714b1e6e67 221 SMART SM00862 144 216 6.5E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_09750 0a935b32159e2637e18f5b714b1e6e67 221 Gene3D G3DSA:1.10.10.10 123 220 2.8E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_09750 0a935b32159e2637e18f5b714b1e6e67 221 SUPERFAMILY SSF52172 2 180 4.27E-33 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_11810 0d6b311edd63250a916087831e7b771a 270 Pfam PF00119 ATP synthase A chain 43 262 2.2E-44 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11810 0d6b311edd63250a916087831e7b771a 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 43 264 1.5E-38 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11810 0d6b311edd63250a916087831e7b771a 270 SUPERFAMILY SSF81336 94 262 2.22E-30 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11810 0d6b311edd63250a916087831e7b771a 270 Gene3D G3DSA:1.20.120.220 94 268 9.0E-27 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11810 0d6b311edd63250a916087831e7b771a 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 33 268 12.76 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11810 0d6b311edd63250a916087831e7b771a 270 PRINTS PR00123 ATP synthase A subunit signature 102 118 9.2E-17 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11810 0d6b311edd63250a916087831e7b771a 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 9.2E-17 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11810 0d6b311edd63250a916087831e7b771a 270 PRINTS PR00123 ATP synthase A subunit signature 186 208 9.2E-17 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_09340 0292b73e2bbf9404c89f4c7be7e147f8 566 Pfam PF01266 FAD dependent oxidoreductase 24 367 4.7E-43 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATC04_09340 0292b73e2bbf9404c89f4c7be7e147f8 566 SUPERFAMILY SSF51905 23 365 6.29E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_09340 0292b73e2bbf9404c89f4c7be7e147f8 566 Gene3D G3DSA:3.50.50.60 25 409 8.5E-99 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_09340 0292b73e2bbf9404c89f4c7be7e147f8 566 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 52 64 4.2E-17 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ATC04_09340 0292b73e2bbf9404c89f4c7be7e147f8 566 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 358 364 4.2E-17 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ATC04_09340 0292b73e2bbf9404c89f4c7be7e147f8 566 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 392 404 4.2E-17 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ATC04_09340 0292b73e2bbf9404c89f4c7be7e147f8 566 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 35 4.2E-17 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ATC04_09340 0292b73e2bbf9404c89f4c7be7e147f8 566 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 97 109 4.2E-17 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ATC04_09340 0292b73e2bbf9404c89f4c7be7e147f8 566 Gene3D G3DSA:3.30.9.10 101 365 8.5E-99 T 11-10-2018 ATC04_09340 0292b73e2bbf9404c89f4c7be7e147f8 566 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 425 545 6.1E-16 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ATC04_09340 0292b73e2bbf9404c89f4c7be7e147f8 566 Gene3D G3DSA:1.10.8.870 448 562 3.7E-15 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ATC04_02300 b214f98afb9a66c0bde0518c04eb2abe 442 Gene3D G3DSA:1.20.1250.20 13 434 5.6E-53 T 11-10-2018 ATC04_02300 b214f98afb9a66c0bde0518c04eb2abe 442 Pfam PF07690 Major Facilitator Superfamily 21 385 4.1E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_02300 b214f98afb9a66c0bde0518c04eb2abe 442 SUPERFAMILY SSF103473 8 433 3.92E-54 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_01185 72d6114b7d2c208705d18d02900c98bf 543 SUPERFAMILY SSF51645 11 535 1.57E-166 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ATC04_01185 72d6114b7d2c208705d18d02900c98bf 543 Gene3D G3DSA:3.20.20.360 4 409 4.3E-174 T 11-10-2018 ATC04_01185 72d6114b7d2c208705d18d02900c98bf 543 ProSitePatterns PS00510 Malate synthase signature. 263 278 - T 11-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ATC04_01185 72d6114b7d2c208705d18d02900c98bf 543 Pfam PF01274 Malate synthase 14 535 2.5E-181 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ATC04_01185 72d6114b7d2c208705d18d02900c98bf 543 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 17 535 3.2E-214 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ATC04_01185 72d6114b7d2c208705d18d02900c98bf 543 PIRSF PIRSF001363 5 537 2.5E-217 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ATC04_01185 72d6114b7d2c208705d18d02900c98bf 543 Gene3D G3DSA:1.20.1220.12 412 535 2.6E-38 T 11-10-2018 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 SMART SM00896 753 846 2.0E-39 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 SMART SM00874 430 498 1.5E-21 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 SUPERFAMILY SSF55681 494 738 3.53E-40 T 11-10-2018 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 Pfam PF03484 tRNA synthetase B5 domain 435 498 1.8E-17 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 Gene3D G3DSA:3.50.40.10 234 423 1.9E-75 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 840 40.157 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 846 3.3E-184 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 Gene3D G3DSA:2.40.50.140 41 176 1.7E-56 T 11-10-2018 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 Pfam PF03147 Ferredoxin-fold anticodon binding domain 753 846 1.2E-22 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 SUPERFAMILY SSF46955 432 502 2.66E-16 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 Pfam PF01588 Putative tRNA binding domain 88 156 4.1E-6 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 Gene3D G3DSA:3.30.56.10 431 503 8.8E-21 T 11-10-2018 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 SUPERFAMILY SSF50249 47 212 7.42E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 Gene3D G3DSA:3.30.70.380 755 846 2.6E-25 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 SUPERFAMILY SSF56037 240 423 2.48E-64 T 11-10-2018 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 SUPERFAMILY SSF54991 749 846 8.24E-26 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 Gene3D G3DSA:3.30.56.10 7 201 1.7E-56 T 11-10-2018 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 Pfam PF03483 B3/4 domain 241 414 9.1E-67 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 SMART SM00873 241 414 4.7E-82 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ATC04_12540 b2ad44291ec094e1ec8a9277a4ed1665 846 Gene3D G3DSA:3.30.930.10 514 742 1.5E-51 T 11-10-2018 ATC04_02075 ef2b271abb1b68a546beb63120572eb1 395 Gene3D G3DSA:3.50.50.60 1 345 3.1E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_02075 ef2b271abb1b68a546beb63120572eb1 395 Pfam PF01593 Flavin containing amine oxidoreductase 12 390 3.3E-29 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 ATC04_02075 ef2b271abb1b68a546beb63120572eb1 395 SUPERFAMILY SSF51905 1 391 2.81E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_02075 ef2b271abb1b68a546beb63120572eb1 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.1E-5 T 11-10-2018 ATC04_02075 ef2b271abb1b68a546beb63120572eb1 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.1E-5 T 11-10-2018 ATC04_02075 ef2b271abb1b68a546beb63120572eb1 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 364 379 1.1E-5 T 11-10-2018 ATC04_02830 33095886287d2a37e4514b627b64a7b6 152 SUPERFAMILY SSF89095 1 151 2.35E-27 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 ATC04_02830 33095886287d2a37e4514b627b64a7b6 152 Gene3D G3DSA:1.10.1510.10 1 92 4.0E-16 T 11-10-2018 ATC04_02830 33095886287d2a37e4514b627b64a7b6 152 Pfam PF09424 Yqey-like protein 4 151 4.8E-31 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 ATC04_02830 33095886287d2a37e4514b627b64a7b6 152 Gene3D G3DSA:1.10.10.410 93 152 4.6E-13 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal ATC04_05455 55db52c679e88840bc2c9ccfd2b20ae2 286 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 52 286 5.4E-89 T 11-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 ATC04_05455 55db52c679e88840bc2c9ccfd2b20ae2 286 Gene3D G3DSA:1.20.1260.10 36 286 1.0E-93 T 11-10-2018 IPR012347 Ferritin-like ATC04_05455 55db52c679e88840bc2c9ccfd2b20ae2 286 PIRSF PIRSF037834 37 286 1.5E-93 T 11-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 ATC04_05455 55db52c679e88840bc2c9ccfd2b20ae2 286 SUPERFAMILY SSF47240 45 279 1.28E-69 T 11-10-2018 IPR009078 Ferritin-like superfamily ATC04_05455 55db52c679e88840bc2c9ccfd2b20ae2 286 Pfam PF05138 Phenylacetic acid catabolic protein 40 286 1.5E-83 T 11-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 ATC04_11560 8fb198e36de4209443cd9c5fa6920cb3 337 Gene3D G3DSA:1.10.260.40 2 55 2.5E-18 T 11-10-2018 ATC04_11560 8fb198e36de4209443cd9c5fa6920cb3 337 Gene3D G3DSA:3.40.50.2300 159 291 1.1E-68 T 11-10-2018 ATC04_11560 8fb198e36de4209443cd9c5fa6920cb3 337 SMART SM00354 1 71 1.4E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATC04_11560 8fb198e36de4209443cd9c5fa6920cb3 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 ATC04_11560 8fb198e36de4209443cd9c5fa6920cb3 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 46 8.5E-14 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATC04_11560 8fb198e36de4209443cd9c5fa6920cb3 337 SUPERFAMILY SSF53822 61 334 1.75E-59 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ATC04_11560 8fb198e36de4209443cd9c5fa6920cb3 337 Gene3D G3DSA:3.40.50.2300 56 308 1.1E-68 T 11-10-2018 ATC04_11560 8fb198e36de4209443cd9c5fa6920cb3 337 SUPERFAMILY SSF47413 3 59 9.48E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_11560 8fb198e36de4209443cd9c5fa6920cb3 337 Pfam PF13377 Periplasmic binding protein-like domain 168 330 5.0E-33 T 11-10-2018 ATC04_15125 74aa3687150f9bcb267cde979a2939dc 387 Pfam PF02515 CoA-transferase family III 7 374 1.1E-115 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 ATC04_15125 74aa3687150f9bcb267cde979a2939dc 387 Gene3D G3DSA:3.40.50.10540 6 325 1.3E-120 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily ATC04_15125 74aa3687150f9bcb267cde979a2939dc 387 Gene3D G3DSA:3.30.1540.10 227 318 1.3E-120 T 11-10-2018 ATC04_15125 74aa3687150f9bcb267cde979a2939dc 387 SUPERFAMILY SSF89796 3 383 2.62E-115 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily ATC04_09520 6c2708ee8302ada51823718d61c13cf6 253 SUPERFAMILY SSF64288 66 240 2.36E-43 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ATC04_09520 6c2708ee8302ada51823718d61c13cf6 253 SMART SM00866 96 234 5.5E-37 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ATC04_09520 6c2708ee8302ada51823718d61c13cf6 253 Gene3D G3DSA:3.40.1410.10 78 242 3.9E-45 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ATC04_09520 6c2708ee8302ada51823718d61c13cf6 253 Pfam PF07702 UTRA domain 97 234 6.5E-33 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ATC04_09520 6c2708ee8302ada51823718d61c13cf6 253 SMART SM00345 18 76 7.8E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_09520 6c2708ee8302ada51823718d61c13cf6 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 4.3E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_09520 6c2708ee8302ada51823718d61c13cf6 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 4.3E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_09520 6c2708ee8302ada51823718d61c13cf6 253 SUPERFAMILY SSF46785 6 86 1.26E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_09520 6c2708ee8302ada51823718d61c13cf6 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 1.9E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_09520 6c2708ee8302ada51823718d61c13cf6 253 Gene3D G3DSA:1.10.10.10 9 76 2.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_15275 d7089cde5fe4bdde511a6ded8731531f 373 SUPERFAMILY SSF53383 18 372 1.9E-74 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_15275 d7089cde5fe4bdde511a6ded8731531f 373 PIRSF PIRSF000525 3 373 5.1E-76 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ATC04_15275 d7089cde5fe4bdde511a6ded8731531f 373 TIGRFAM TIGR01366 serC_3: putative phosphoserine aminotransferase 13 373 1.3E-179 T 11-10-2018 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type GO:0004648|GO:0006564|GO:0009058 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 ATC04_15275 d7089cde5fe4bdde511a6ded8731531f 373 Pfam PF00266 Aminotransferase class-V 139 332 2.0E-13 T 11-10-2018 IPR000192 Aminotransferase class V domain ATC04_15275 d7089cde5fe4bdde511a6ded8731531f 373 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 373 22.632 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ATC04_15275 d7089cde5fe4bdde511a6ded8731531f 373 Gene3D G3DSA:3.90.1150.10 269 373 6.2E-36 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_15275 d7089cde5fe4bdde511a6ded8731531f 373 Gene3D G3DSA:3.40.640.10 28 267 1.8E-56 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_14880 dd895819f5ca0b821ceb32a76904e5c9 252 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 42.535 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 ATC04_14880 dd895819f5ca0b821ceb32a76904e5c9 252 Gene3D G3DSA:3.20.20.370 3 251 1.2E-98 T 11-10-2018 ATC04_14880 dd895819f5ca0b821ceb32a76904e5c9 252 SUPERFAMILY SSF88713 4 251 5.71E-94 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ATC04_14880 dd895819f5ca0b821ceb32a76904e5c9 252 Pfam PF03746 LamB/YcsF family 4 241 9.2E-98 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 ATC04_08595 74452439ee70eea2b40c01e38bd73cbe 449 Pfam PF08245 Mur ligase middle domain 46 277 5.9E-16 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ATC04_08595 74452439ee70eea2b40c01e38bd73cbe 449 Pfam PF02875 Mur ligase family, glutamate ligase domain 303 378 9.3E-9 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ATC04_08595 74452439ee70eea2b40c01e38bd73cbe 449 Gene3D G3DSA:3.90.190.20 304 447 6.0E-28 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATC04_08595 74452439ee70eea2b40c01e38bd73cbe 449 TIGRFAM TIGR01499 folC: bifunctional protein FolC 27 444 5.0E-103 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 ATC04_08595 74452439ee70eea2b40c01e38bd73cbe 449 Gene3D G3DSA:3.40.1190.10 2 303 8.0E-95 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATC04_08595 74452439ee70eea2b40c01e38bd73cbe 449 SUPERFAMILY SSF53623 7 300 6.18E-88 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATC04_08595 74452439ee70eea2b40c01e38bd73cbe 449 PIRSF PIRSF001563 2 449 1.7E-111 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 ATC04_08595 74452439ee70eea2b40c01e38bd73cbe 449 SUPERFAMILY SSF53244 303 446 2.01E-22 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATC04_08875 370b08f78fd4b1e217c32e3601413635 201 Gene3D G3DSA:1.10.10.60 7 60 5.9E-17 T 11-10-2018 ATC04_08875 370b08f78fd4b1e217c32e3601413635 201 Pfam PF16859 Bacterial transcriptional repressor C-terminal 84 186 9.9E-11 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ATC04_08875 370b08f78fd4b1e217c32e3601413635 201 SUPERFAMILY SSF48498 84 190 1.36E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_08875 370b08f78fd4b1e217c32e3601413635 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 8.8E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_08875 370b08f78fd4b1e217c32e3601413635 201 SUPERFAMILY SSF46689 11 71 6.48E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_08875 370b08f78fd4b1e217c32e3601413635 201 Gene3D G3DSA:1.10.357.10 61 188 1.6E-11 T 11-10-2018 ATC04_12125 012f5d0d5ef3050bcaa6b4736244faa6 196 SUPERFAMILY SSF53041 4 143 2.35E-43 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ATC04_12125 012f5d0d5ef3050bcaa6b4736244faa6 196 Pfam PF02796 Helix-turn-helix domain of resolvase 146 190 4.8E-9 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 ATC04_12125 012f5d0d5ef3050bcaa6b4736244faa6 196 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_12125 012f5d0d5ef3050bcaa6b4736244faa6 196 SMART SM00857 4 144 1.7E-57 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_12125 012f5d0d5ef3050bcaa6b4736244faa6 196 ProSitePatterns PS00398 Site-specific recombinases signature 2. 63 75 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_12125 012f5d0d5ef3050bcaa6b4736244faa6 196 Pfam PF00239 Resolvase, N terminal domain 4 143 2.4E-45 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_12125 012f5d0d5ef3050bcaa6b4736244faa6 196 SUPERFAMILY SSF46689 146 192 1.34E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_12125 012f5d0d5ef3050bcaa6b4736244faa6 196 Gene3D G3DSA:3.40.50.1390 4 132 6.6E-43 T 11-10-2018 ATC04_12125 012f5d0d5ef3050bcaa6b4736244faa6 196 Gene3D G3DSA:1.10.10.60 146 191 5.6E-5 T 11-10-2018 ATC04_13930 02df1e26cb41b31b200634ed681bd692 595 Pfam PF00364 Biotin-requiring enzyme 525 591 4.0E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ATC04_13930 02df1e26cb41b31b200634ed681bd692 595 Gene3D G3DSA:3.30.470.130 1 453 9.3E-176 T 11-10-2018 ATC04_13930 02df1e26cb41b31b200634ed681bd692 595 SUPERFAMILY SSF51230 518 591 1.57E-18 T 11-10-2018 IPR011053 Single hybrid motif ATC04_13930 02df1e26cb41b31b200634ed681bd692 595 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 548 565 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_13930 02df1e26cb41b31b200634ed681bd692 595 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 324 2.0E-73 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_13930 02df1e26cb41b31b200634ed681bd692 595 SUPERFAMILY SSF52440 3 116 6.69E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ATC04_13930 02df1e26cb41b31b200634ed681bd692 595 SUPERFAMILY SSF51246 332 453 3.56E-35 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ATC04_13930 02df1e26cb41b31b200634ed681bd692 595 SUPERFAMILY SSF56059 86 327 3.18E-58 T 11-10-2018 ATC04_13930 02df1e26cb41b31b200634ed681bd692 595 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_13930 02df1e26cb41b31b200634ed681bd692 595 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 113 3.6E-45 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_13930 02df1e26cb41b31b200634ed681bd692 595 Gene3D G3DSA:2.40.50.100 522 592 5.5E-20 T 11-10-2018 ATC04_13930 02df1e26cb41b31b200634ed681bd692 595 Pfam PF02785 Biotin carboxylase C-terminal domain 337 447 8.1E-36 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_13930 02df1e26cb41b31b200634ed681bd692 595 SMART SM00878 337 447 1.9E-55 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_05605 09959bac5f6bf9a23586bb2a273c7597 385 PIRSF PIRSF001434 1 385 3.2E-135 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_05605 09959bac5f6bf9a23586bb2a273c7597 385 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 382 3.3E-137 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_05605 09959bac5f6bf9a23586bb2a273c7597 385 SUPERFAMILY SSF53383 9 383 4.57E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_05605 09959bac5f6bf9a23586bb2a273c7597 385 Gene3D G3DSA:3.40.640.10 1 253 9.2E-90 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_05605 09959bac5f6bf9a23586bb2a273c7597 385 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 195 209 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_05605 09959bac5f6bf9a23586bb2a273c7597 385 Gene3D G3DSA:3.90.1150.10 254 385 1.4E-49 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_07140 78fdb5fef9b1ac72985fa61384d5abf0 190 SUPERFAMILY SSF46785 6 159 7.71E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_07140 78fdb5fef9b1ac72985fa61384d5abf0 190 Gene3D G3DSA:1.10.10.10 1 82 7.2E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_01505 21d85a8fc6d6f71a70181035ad68ecd6 268 Gene3D G3DSA:3.10.129.10 18 268 2.1E-52 T 11-10-2018 ATC04_01505 21d85a8fc6d6f71a70181035ad68ecd6 268 SUPERFAMILY SSF54637 15 149 3.36E-23 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_01505 21d85a8fc6d6f71a70181035ad68ecd6 268 Pfam PF01575 MaoC like domain 152 248 8.9E-17 T 11-10-2018 IPR002539 MaoC-like dehydratase domain ATC04_01505 21d85a8fc6d6f71a70181035ad68ecd6 268 SUPERFAMILY SSF54637 163 252 2.57E-15 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_07130 4231bb56abc1f0fd9e940acbcdc9f4aa 378 SUPERFAMILY SSF52402 1 244 9.26E-49 T 11-10-2018 ATC04_07130 4231bb56abc1f0fd9e940acbcdc9f4aa 378 Gene3D G3DSA:2.30.30.280 214 277 5.0E-17 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ATC04_07130 4231bb56abc1f0fd9e940acbcdc9f4aa 378 Pfam PF03054 tRNA methyl transferase 1 364 1.1E-112 T 11-10-2018 ATC04_07130 4231bb56abc1f0fd9e940acbcdc9f4aa 378 Gene3D G3DSA:3.40.50.620 1 211 1.2E-70 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_07130 4231bb56abc1f0fd9e940acbcdc9f4aa 378 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 364 1.1E-86 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ATC04_07130 4231bb56abc1f0fd9e940acbcdc9f4aa 378 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 365 35.332 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ATC04_07130 4231bb56abc1f0fd9e940acbcdc9f4aa 378 Gene3D G3DSA:2.40.30.10 286 370 2.3E-9 T 11-10-2018 ATC04_02655 eb414685db980487e46aeea2222b9ba5 254 Pfam PF00230 Major intrinsic protein 12 236 3.3E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_02655 eb414685db980487e46aeea2222b9ba5 254 Gene3D G3DSA:1.20.1080.10 9 241 1.2E-80 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 ATC04_02655 eb414685db980487e46aeea2222b9ba5 254 PRINTS PR00783 Major intrinsic protein family signature 180 202 5.8E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_02655 eb414685db980487e46aeea2222b9ba5 254 PRINTS PR00783 Major intrinsic protein family signature 11 30 5.8E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_02655 eb414685db980487e46aeea2222b9ba5 254 PRINTS PR00783 Major intrinsic protein family signature 56 80 5.8E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_02655 eb414685db980487e46aeea2222b9ba5 254 PRINTS PR00783 Major intrinsic protein family signature 150 168 5.8E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_02655 eb414685db980487e46aeea2222b9ba5 254 PRINTS PR00783 Major intrinsic protein family signature 219 239 5.8E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_02655 eb414685db980487e46aeea2222b9ba5 254 PRINTS PR00783 Major intrinsic protein family signature 93 112 5.8E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_02655 eb414685db980487e46aeea2222b9ba5 254 SUPERFAMILY SSF81338 13 239 1.83E-62 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 ATC04_02655 eb414685db980487e46aeea2222b9ba5 254 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 236 2.4E-59 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_02655 eb414685db980487e46aeea2222b9ba5 254 ProSitePatterns PS00221 MIP family signature. 74 82 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 ATC04_05515 03096f0f6cadbda84eaad312f5339784 566 SUPERFAMILY SSF52518 405 528 1.61E-16 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_05515 03096f0f6cadbda84eaad312f5339784 566 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 404 524 7.4E-8 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ATC04_05515 03096f0f6cadbda84eaad312f5339784 566 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 7 558 29.73 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 ATC04_05515 03096f0f6cadbda84eaad312f5339784 566 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 14 427 2.8E-102 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 ATC04_05515 03096f0f6cadbda84eaad312f5339784 566 Gene3D G3DSA:3.40.50.970 366 560 5.8E-50 T 11-10-2018 ATC04_05515 03096f0f6cadbda84eaad312f5339784 566 Gene3D G3DSA:3.40.50.1220 216 357 1.2E-20 T 11-10-2018 ATC04_05515 03096f0f6cadbda84eaad312f5339784 566 PIRSF PIRSF004983 7 562 2.4E-118 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 ATC04_05515 03096f0f6cadbda84eaad312f5339784 566 SUPERFAMILY SSF52518 10 190 9.82E-30 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_05515 03096f0f6cadbda84eaad312f5339784 566 Gene3D G3DSA:3.40.50.970 9 195 7.2E-61 T 11-10-2018 ATC04_05515 03096f0f6cadbda84eaad312f5339784 566 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 176 3.8E-27 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ATC04_09210 35d861a329eac2ef1a94b7f7dcb0ffc2 157 SUPERFAMILY SSF53098 4 144 2.43E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_09210 35d861a329eac2ef1a94b7f7dcb0ffc2 157 Gene3D G3DSA:3.30.420.140 3 152 8.5E-38 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 ATC04_09210 35d861a329eac2ef1a94b7f7dcb0ffc2 157 Pfam PF03652 Holliday junction resolvase 4 141 1.8E-33 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ATC04_09210 35d861a329eac2ef1a94b7f7dcb0ffc2 157 SMART SM00732 3 109 1.4E-15 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 ATC04_09210 35d861a329eac2ef1a94b7f7dcb0ffc2 157 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 144 19.242 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ATC04_09210 35d861a329eac2ef1a94b7f7dcb0ffc2 157 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 141 1.0E-22 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ATC04_04435 fa53946b022f3a269ff30d960acde8a9 611 SUPERFAMILY SSF90123 30 347 7.98E-64 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_04435 fa53946b022f3a269ff30d960acde8a9 611 Gene3D G3DSA:3.40.50.300 361 609 6.4E-85 T 11-10-2018 ATC04_04435 fa53946b022f3a269ff30d960acde8a9 611 SMART SM00382 394 580 1.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04435 fa53946b022f3a269ff30d960acde8a9 611 SUPERFAMILY SSF52540 361 602 1.33E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_04435 fa53946b022f3a269ff30d960acde8a9 611 Pfam PF00664 ABC transporter transmembrane region 47 320 2.8E-36 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ATC04_04435 fa53946b022f3a269ff30d960acde8a9 611 Pfam PF00005 ABC transporter 386 534 1.3E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_04435 fa53946b022f3a269ff30d960acde8a9 611 ProSitePatterns PS00211 ABC transporters family signature. 506 520 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_04435 fa53946b022f3a269ff30d960acde8a9 611 Gene3D G3DSA:1.20.1560.10 15 349 3.6E-71 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_04345 96368e4ab14dcf3131342939ad9df329 410 SUPERFAMILY SSF47203 259 406 6.12E-39 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_04345 96368e4ab14dcf3131342939ad9df329 410 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 265 403 1.2E-34 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_04345 96368e4ab14dcf3131342939ad9df329 410 SUPERFAMILY SSF56645 36 254 9.16E-49 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_04345 96368e4ab14dcf3131342939ad9df329 410 Gene3D G3DSA:1.10.540.10 24 147 1.6E-20 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_04345 96368e4ab14dcf3131342939ad9df329 410 Gene3D G3DSA:1.20.140.10 258 410 2.0E-41 T 11-10-2018 ATC04_04345 96368e4ab14dcf3131342939ad9df329 410 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 149 1.4E-13 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_04345 96368e4ab14dcf3131342939ad9df329 410 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 153 244 3.2E-18 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_04345 96368e4ab14dcf3131342939ad9df329 410 Gene3D G3DSA:2.40.110.10 152 256 4.7E-29 T 11-10-2018 ATC04_06470 b2da23051120d48d3f3c88924224500d 205 SUPERFAMILY SSF55729 14 190 1.64E-38 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_06470 b2da23051120d48d3f3c88924224500d 205 Gene3D G3DSA:3.40.630.30 13 195 1.6E-41 T 11-10-2018 ATC04_06470 b2da23051120d48d3f3c88924224500d 205 Pfam PF13302 Acetyltransferase (GNAT) domain 18 167 6.9E-21 T 11-10-2018 IPR000182 GNAT domain ATC04_04715 df098504da592a0817006652e7b62493 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 5.7E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04715 df098504da592a0817006652e7b62493 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 5.7E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04715 df098504da592a0817006652e7b62493 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 126 146 5.7E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04715 df098504da592a0817006652e7b62493 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 5.7E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04715 df098504da592a0817006652e7b62493 166 SMART SM00347 32 136 1.3E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04715 df098504da592a0817006652e7b62493 166 SUPERFAMILY SSF46785 5 151 7.29E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_04715 df098504da592a0817006652e7b62493 166 Pfam PF01047 MarR family 41 99 4.3E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04715 df098504da592a0817006652e7b62493 166 Gene3D G3DSA:1.10.10.10 7 154 1.3E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_02140 7aeff3268cfa64902113c7e671cda0f3 362 Gene3D G3DSA:3.30.470.20 190 339 1.3E-43 T 11-10-2018 ATC04_02140 7aeff3268cfa64902113c7e671cda0f3 362 SUPERFAMILY SSF56059 3 331 3.18E-93 T 11-10-2018 ATC04_02140 7aeff3268cfa64902113c7e671cda0f3 362 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 20 332 2.7E-104 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 ATC04_02140 7aeff3268cfa64902113c7e671cda0f3 362 Gene3D G3DSA:3.30.1490.20 3 189 5.5E-63 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ATC04_00495 92704d8b5ee385140327a06f0cfba103 349 Gene3D G3DSA:1.10.260.40 7 70 5.3E-16 T 11-10-2018 ATC04_00495 92704d8b5ee385140327a06f0cfba103 349 Pfam PF00356 Bacterial regulatory proteins, lacI family 21 61 1.1E-11 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATC04_00495 92704d8b5ee385140327a06f0cfba103 349 Gene3D G3DSA:3.40.50.2300 71 318 1.6E-50 T 11-10-2018 ATC04_00495 92704d8b5ee385140327a06f0cfba103 349 Pfam PF13377 Periplasmic binding protein-like domain 180 343 3.4E-32 T 11-10-2018 ATC04_00495 92704d8b5ee385140327a06f0cfba103 349 SUPERFAMILY SSF47413 14 73 7.5E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_00495 92704d8b5ee385140327a06f0cfba103 349 SMART SM00354 15 87 1.7E-10 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATC04_00495 92704d8b5ee385140327a06f0cfba103 349 Gene3D G3DSA:3.40.50.2300 172 303 1.6E-50 T 11-10-2018 ATC04_00495 92704d8b5ee385140327a06f0cfba103 349 SUPERFAMILY SSF53822 78 344 4.07E-46 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ATC04_02500 a522ed37c74692d1289db57e95036183 702 Pfam PF00005 ABC transporter 445 593 2.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_02500 a522ed37c74692d1289db57e95036183 702 Gene3D G3DSA:3.40.50.300 424 668 2.7E-89 T 11-10-2018 ATC04_02500 a522ed37c74692d1289db57e95036183 702 ProSitePatterns PS00211 ABC transporters family signature. 565 579 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_02500 a522ed37c74692d1289db57e95036183 702 SMART SM00382 453 639 2.1E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_02500 a522ed37c74692d1289db57e95036183 702 Pfam PF00664 ABC transporter transmembrane region 71 381 3.1E-62 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ATC04_02500 a522ed37c74692d1289db57e95036183 702 SUPERFAMILY SSF90123 57 413 5.62E-87 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_02500 a522ed37c74692d1289db57e95036183 702 SUPERFAMILY SSF52540 419 664 1.28E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_04220 6ed9a64dfe211b02092a4d20436b1886 158 SUPERFAMILY SSF54909 64 148 2.68E-17 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_04220 6ed9a64dfe211b02092a4d20436b1886 158 Gene3D G3DSA:3.30.70.920 57 149 4.4E-19 T 11-10-2018 ATC04_04220 6ed9a64dfe211b02092a4d20436b1886 158 SMART SM00344 4 110 5.4E-21 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATC04_04220 6ed9a64dfe211b02092a4d20436b1886 158 SUPERFAMILY SSF46785 3 64 3.67E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_04220 6ed9a64dfe211b02092a4d20436b1886 158 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 1.3E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_04220 6ed9a64dfe211b02092a4d20436b1886 158 Pfam PF01037 Lrp/AsnC ligand binding domain 70 139 1.1E-15 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATC04_04220 6ed9a64dfe211b02092a4d20436b1886 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 7.3E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_04220 6ed9a64dfe211b02092a4d20436b1886 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 7.3E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_04220 6ed9a64dfe211b02092a4d20436b1886 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 7.3E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_04220 6ed9a64dfe211b02092a4d20436b1886 158 Gene3D G3DSA:1.10.10.10 1 52 8.3E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_09230 abc476ceef01a9f228d8374eb7ce4b58 162 SUPERFAMILY SSF52540 1 158 8.01E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09230 abc476ceef01a9f228d8374eb7ce4b58 162 Gene3D G3DSA:3.40.50.300 1 161 1.7E-51 T 11-10-2018 ATC04_09230 abc476ceef01a9f228d8374eb7ce4b58 162 Pfam PF01202 Shikimate kinase 8 158 4.4E-41 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ATC04_09230 abc476ceef01a9f228d8374eb7ce4b58 162 Hamap MF_00109 Shikimate kinase [aroK]. 1 160 22.248 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ATC04_09230 abc476ceef01a9f228d8374eb7ce4b58 162 PRINTS PR01100 Shikimate kinase family signature 2 17 1.9E-18 T 11-10-2018 ATC04_09230 abc476ceef01a9f228d8374eb7ce4b58 162 PRINTS PR01100 Shikimate kinase family signature 26 39 1.9E-18 T 11-10-2018 ATC04_09230 abc476ceef01a9f228d8374eb7ce4b58 162 PRINTS PR01100 Shikimate kinase family signature 53 61 1.9E-18 T 11-10-2018 ATC04_09230 abc476ceef01a9f228d8374eb7ce4b58 162 PRINTS PR01100 Shikimate kinase family signature 88 105 1.9E-18 T 11-10-2018 ATC04_09230 abc476ceef01a9f228d8374eb7ce4b58 162 PRINTS PR01100 Shikimate kinase family signature 69 78 1.9E-18 T 11-10-2018 ATC04_16745 e6603712bd74f24c2f299a4561e3d358 164 Pfam PF13380 CoA binding domain 24 139 1.6E-40 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ATC04_16745 e6603712bd74f24c2f299a4561e3d358 164 Gene3D G3DSA:3.40.50.720 11 146 6.2E-41 T 11-10-2018 ATC04_16745 e6603712bd74f24c2f299a4561e3d358 164 SMART SM00881 19 113 7.1E-21 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ATC04_16745 e6603712bd74f24c2f299a4561e3d358 164 SUPERFAMILY SSF51735 14 142 1.27E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_11240 5ee66cbdee9c7b6d41c55afe261652b2 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 199 218 1.1E-26 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATC04_11240 5ee66cbdee9c7b6d41c55afe261652b2 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 1.1E-26 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATC04_11240 5ee66cbdee9c7b6d41c55afe261652b2 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 77 96 1.1E-26 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATC04_11240 5ee66cbdee9c7b6d41c55afe261652b2 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 177 199 1.1E-26 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATC04_11240 5ee66cbdee9c7b6d41c55afe261652b2 254 Pfam PF01311 Bacterial export proteins, family 1 12 241 3.0E-55 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATC04_11240 5ee66cbdee9c7b6d41c55afe261652b2 254 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 249 2.0E-51 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 ATC04_10900 4b32d4c71449342534b73e07ec0d5050 1904 Gene3D G3DSA:2.60.40.650 521 615 2.6E-10 T 11-10-2018 ATC04_10900 4b32d4c71449342534b73e07ec0d5050 1904 Pfam PF13205 Bacterial Ig-like domain 1312 1405 7.7E-10 T 11-10-2018 IPR032812 SbsA, Ig-like domain ATC04_10900 4b32d4c71449342534b73e07ec0d5050 1904 Pfam PF13205 Bacterial Ig-like domain 780 871 1.9E-16 T 11-10-2018 IPR032812 SbsA, Ig-like domain ATC04_10900 4b32d4c71449342534b73e07ec0d5050 1904 Gene3D G3DSA:2.60.40.1220 785 871 2.7E-5 T 11-10-2018 ATC04_10900 4b32d4c71449342534b73e07ec0d5050 1904 Pfam PF13313 Domain of unknown function (DUF4082) 618 763 3.9E-47 T 11-10-2018 IPR025141 Domain of unknown function DUF4082 ATC04_10900 4b32d4c71449342534b73e07ec0d5050 1904 Pfam PF13313 Domain of unknown function (DUF4082) 886 1025 1.2E-37 T 11-10-2018 IPR025141 Domain of unknown function DUF4082 ATC04_10900 4b32d4c71449342534b73e07ec0d5050 1904 Pfam PF13313 Domain of unknown function (DUF4082) 1678 1817 5.6E-36 T 11-10-2018 IPR025141 Domain of unknown function DUF4082 ATC04_10900 4b32d4c71449342534b73e07ec0d5050 1904 Pfam PF13313 Domain of unknown function (DUF4082) 1419 1558 1.7E-35 T 11-10-2018 IPR025141 Domain of unknown function DUF4082 ATC04_10900 4b32d4c71449342534b73e07ec0d5050 1904 Pfam PF13313 Domain of unknown function (DUF4082) 1144 1284 3.4E-36 T 11-10-2018 IPR025141 Domain of unknown function DUF4082 ATC04_10900 4b32d4c71449342534b73e07ec0d5050 1904 SUPERFAMILY SSF81296 525 599 4.2E-10 T 11-10-2018 IPR014756 Immunoglobulin E-set ATC04_09300 7f60875c5b206c5a4e52fc92ca82f9e9 92 SMART SM01409 20 84 1.0E-9 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ATC04_09300 7f60875c5b206c5a4e52fc92ca82f9e9 92 SUPERFAMILY SSF63562 13 89 2.96E-22 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ATC04_09300 7f60875c5b206c5a4e52fc92ca82f9e9 92 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 13 85 13.318 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_09300 7f60875c5b206c5a4e52fc92ca82f9e9 92 Pfam PF01192 RNA polymerase Rpb6 21 83 4.9E-12 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ATC04_09300 7f60875c5b206c5a4e52fc92ca82f9e9 92 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 14 83 3.3E-17 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATC04_09300 7f60875c5b206c5a4e52fc92ca82f9e9 92 Gene3D G3DSA:3.90.940.10 13 92 1.3E-16 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ATC04_06450 6cc103976d5115bec25183ede40d86fc 1444 SUPERFAMILY SSF52540 363 1176 1.27E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06450 6cc103976d5115bec25183ede40d86fc 1444 Gene3D G3DSA:3.40.50.300 276 545 1.6E-10 T 11-10-2018 ATC04_07615 f4dacc82a0ff68ad31e5b873d41e4304 662 Pfam PF13520 Amino acid permease 49 452 1.6E-28 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_07615 f4dacc82a0ff68ad31e5b873d41e4304 662 Gene3D G3DSA:1.20.1740.10 43 496 6.6E-20 T 11-10-2018 ATC04_07720 307d32dda6027b86f4a0f7066dbc3d62 708 Pfam PF00378 Enoyl-CoA hydratase/isomerase 58 232 5.6E-18 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ATC04_07720 307d32dda6027b86f4a0f7066dbc3d62 708 Gene3D G3DSA:3.40.50.720 344 531 4.6E-55 T 11-10-2018 ATC04_07720 307d32dda6027b86f4a0f7066dbc3d62 708 SUPERFAMILY SSF48179 640 703 1.28E-11 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_07720 307d32dda6027b86f4a0f7066dbc3d62 708 SUPERFAMILY SSF51735 345 526 4.57E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_07720 307d32dda6027b86f4a0f7066dbc3d62 708 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 347 526 1.6E-51 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ATC04_07720 307d32dda6027b86f4a0f7066dbc3d62 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 530 609 5.0E-14 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ATC04_07720 307d32dda6027b86f4a0f7066dbc3d62 708 Gene3D G3DSA:3.90.226.10 36 333 5.0E-52 T 11-10-2018 ATC04_07720 307d32dda6027b86f4a0f7066dbc3d62 708 Gene3D G3DSA:1.10.1040.50 532 707 1.9E-31 T 11-10-2018 ATC04_07720 307d32dda6027b86f4a0f7066dbc3d62 708 SUPERFAMILY SSF48179 529 609 1.45E-14 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_07720 307d32dda6027b86f4a0f7066dbc3d62 708 SUPERFAMILY SSF52096 51 323 1.83E-36 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_09370 09d9339ce11347b90280d1ca1a88c82d 312 Gene3D G3DSA:3.30.1180.10 172 296 1.4E-30 T 11-10-2018 ATC04_09370 09d9339ce11347b90280d1ca1a88c82d 312 Pfam PF02645 Uncharacterised protein, DegV family COG1307 26 297 4.4E-61 T 11-10-2018 IPR003797 DegV ATC04_09370 09d9339ce11347b90280d1ca1a88c82d 312 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 27 295 2.3E-63 T 11-10-2018 IPR003797 DegV ATC04_09370 09d9339ce11347b90280d1ca1a88c82d 312 SUPERFAMILY SSF82549 26 295 3.4E-59 T 11-10-2018 ATC04_09370 09d9339ce11347b90280d1ca1a88c82d 312 Gene3D G3DSA:3.40.50.10170 23 169 3.4E-37 T 11-10-2018 ATC04_17050 a425a13842b104cbafae1b1aecbc83f7 274 SUPERFAMILY SSF52402 4 273 4.68E-77 T 11-10-2018 ATC04_17050 a425a13842b104cbafae1b1aecbc83f7 274 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 272 3.6E-67 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 ATC04_17050 a425a13842b104cbafae1b1aecbc83f7 274 Pfam PF02540 NAD synthase 24 264 1.1E-65 T 11-10-2018 IPR022310 NAD/GMP synthase ATC04_17050 a425a13842b104cbafae1b1aecbc83f7 274 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 19 267 44.857 T 11-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 ATC04_17050 a425a13842b104cbafae1b1aecbc83f7 274 Gene3D G3DSA:3.40.50.620 1 274 8.2E-80 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_01610 4815429433d37a1c7a67aa4600ef036d 268 SMART SM00382 44 236 1.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_01610 4815429433d37a1c7a67aa4600ef036d 268 Pfam PF00005 ABC transporter 36 187 2.4E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_01610 4815429433d37a1c7a67aa4600ef036d 268 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_01610 4815429433d37a1c7a67aa4600ef036d 268 SUPERFAMILY SSF52540 10 258 2.77E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_01610 4815429433d37a1c7a67aa4600ef036d 268 Gene3D G3DSA:3.40.50.300 7 268 1.5E-83 T 11-10-2018 ATC04_15480 631c601bc702edc00b1d3cd26db79a1a 226 Gene3D G3DSA:3.40.50.2300 1 122 2.9E-35 T 11-10-2018 ATC04_15480 631c601bc702edc00b1d3cd26db79a1a 226 SUPERFAMILY SSF52172 1 126 1.99E-39 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_15480 631c601bc702edc00b1d3cd26db79a1a 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 1.2E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_15480 631c601bc702edc00b1d3cd26db79a1a 226 SMART SM00448 2 112 4.9E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_15480 631c601bc702edc00b1d3cd26db79a1a 226 Gene3D G3DSA:1.10.10.10 126 226 1.8E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_15480 631c601bc702edc00b1d3cd26db79a1a 226 Pfam PF00072 Response regulator receiver domain 4 113 1.5E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_15480 631c601bc702edc00b1d3cd26db79a1a 226 SUPERFAMILY SSF46894 126 225 8.5E-31 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_15480 631c601bc702edc00b1d3cd26db79a1a 226 SMART SM00862 148 224 4.9E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_04505 7104bb101beabb70d280049d741e214e 451 Gene3D G3DSA:1.25.60.10 10 133 5.0E-16 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily ATC04_04505 7104bb101beabb70d280049d741e214e 451 SUPERFAMILY SSF158791 13 134 2.75E-22 T 11-10-2018 ATC04_04505 7104bb101beabb70d280049d741e214e 451 SUPERFAMILY SSF54631 141 270 2.92E-13 T 11-10-2018 ATC04_04505 7104bb101beabb70d280049d741e214e 451 SUPERFAMILY SSF161093 282 450 1.05E-43 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 ATC04_04505 7104bb101beabb70d280049d741e214e 451 Gene3D G3DSA:3.10.580.10 135 260 1.7E-18 T 11-10-2018 ATC04_04505 7104bb101beabb70d280049d741e214e 451 Pfam PF01769 Divalent cation transporter 323 443 1.1E-25 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 ATC04_04505 7104bb101beabb70d280049d741e214e 451 SMART SM00924 35 138 2.3E-20 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain ATC04_04505 7104bb101beabb70d280049d741e214e 451 Gene3D G3DSA:1.10.357.20 275 450 3.7E-51 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain ATC04_04505 7104bb101beabb70d280049d741e214e 451 Pfam PF03448 MgtE intracellular N domain 35 134 5.1E-20 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain ATC04_04505 7104bb101beabb70d280049d741e214e 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 19 450 3.0E-87 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 ATC04_05540 eab8e768c67538d891578da94db8f624 365 SUPERFAMILY SSF48576 54 364 1.11E-74 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ATC04_05540 eab8e768c67538d891578da94db8f624 365 Pfam PF00348 Polyprenyl synthetase 72 315 1.0E-54 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 ATC04_05540 eab8e768c67538d891578da94db8f624 365 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 242 254 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site ATC04_05540 eab8e768c67538d891578da94db8f624 365 Gene3D G3DSA:1.10.600.10 37 365 1.4E-91 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ATC04_16375 53be3daeac4a42b6d605f2cc35b9710f 354 Gene3D G3DSA:3.40.50.1820 31 336 4.0E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_16375 53be3daeac4a42b6d605f2cc35b9710f 354 SUPERFAMILY SSF53474 23 333 8.84E-27 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_16375 53be3daeac4a42b6d605f2cc35b9710f 354 Pfam PF12146 Serine aminopeptidase, S33 58 271 1.5E-20 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 ATC04_09390 dbc861a7524f60dd68cf6fb63b283570 86 SUPERFAMILY SSF46992 3 86 1.12E-28 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_09390 dbc861a7524f60dd68cf6fb63b283570 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 83 2.0E-20 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_09390 dbc861a7524f60dd68cf6fb63b283570 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 85 3.1E-25 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_09390 dbc861a7524f60dd68cf6fb63b283570 86 Pfam PF01649 Ribosomal protein S20 2 84 1.2E-27 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_09390 dbc861a7524f60dd68cf6fb63b283570 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.826 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_09390 dbc861a7524f60dd68cf6fb63b283570 86 Gene3D G3DSA:1.20.58.110 1 86 3.2E-29 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_07740 96617ab8ca164df88571c5b4baf4d5f1 353 Gene3D G3DSA:3.90.1150.10 14 339 8.7E-127 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_07740 96617ab8ca164df88571c5b4baf4d5f1 353 Pfam PF01212 Beta-eliminating lyase 12 296 6.6E-54 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 ATC04_07740 96617ab8ca164df88571c5b4baf4d5f1 353 SUPERFAMILY SSF53383 11 348 2.36E-90 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_07740 96617ab8ca164df88571c5b4baf4d5f1 353 Gene3D G3DSA:3.40.640.10 21 258 8.7E-127 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_02620 07806fb2eb54795727255fa73cd0110c 210 Gene3D G3DSA:1.20.58.350 21 74 5.9E-53 T 11-10-2018 ATC04_02620 07806fb2eb54795727255fa73cd0110c 210 Pfam PF03061 Thioesterase superfamily 120 191 3.0E-8 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ATC04_02620 07806fb2eb54795727255fa73cd0110c 210 SUPERFAMILY SSF54637 17 199 5.98E-37 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_02620 07806fb2eb54795727255fa73cd0110c 210 Gene3D G3DSA:3.10.129.10 75 199 5.9E-53 T 11-10-2018 ATC04_05685 6c7ea175aafaa59e512eef0fcb73a4cf 169 SUPERFAMILY SSF50249 12 164 3.02E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_05685 6c7ea175aafaa59e512eef0fcb73a4cf 169 Gene3D G3DSA:2.40.50.140 11 137 1.9E-24 T 11-10-2018 ATC04_05685 6c7ea175aafaa59e512eef0fcb73a4cf 169 Pfam PF00436 Single-strand binding protein family 12 106 4.4E-14 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 ATC04_03305 2702882a55e5e2b2dc4b8b925671eb4f 266 Pfam PF00149 Calcineurin-like phosphoesterase 1 193 9.6E-18 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ATC04_03305 2702882a55e5e2b2dc4b8b925671eb4f 266 SUPERFAMILY SSF56300 1 218 3.01E-45 T 11-10-2018 ATC04_03305 2702882a55e5e2b2dc4b8b925671eb4f 266 Gene3D G3DSA:3.60.21.10 1 262 1.9E-64 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ATC04_09665 ac7410545552628d85e4e4fe87d9737a 310 SUPERFAMILY SSF54534 138 305 5.7E-27 T 11-10-2018 ATC04_09665 ac7410545552628d85e4e4fe87d9737a 310 Gene3D G3DSA:3.10.50.40 163 309 7.7E-28 T 11-10-2018 ATC04_09665 ac7410545552628d85e4e4fe87d9737a 310 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 217 302 1.9E-16 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ATC04_16095 421eeefe0a49ceadab926667fc7dc10a 132 SUPERFAMILY SSF69118 10 130 7.72E-32 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ATC04_16095 421eeefe0a49ceadab926667fc7dc10a 132 Gene3D G3DSA:1.20.1290.10 10 132 5.4E-36 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ATC04_16095 421eeefe0a49ceadab926667fc7dc10a 132 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 10 129 5.1E-50 T 11-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 ATC04_16095 421eeefe0a49ceadab926667fc7dc10a 132 Pfam PF02627 Carboxymuconolactone decarboxylase family 41 121 7.6E-22 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ATC04_09560 f8d561cdd3f990edb4eac6d09bb07ed3 197 Gene3D G3DSA:1.10.10.10 144 171 4.2E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_09560 f8d561cdd3f990edb4eac6d09bb07ed3 197 Pfam PF04545 Sigma-70, region 4 135 173 1.7E-6 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ATC04_16220 bbc047bae81822f6d4a5f2097c6eb986 237 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 33 222 1.0E-25 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 ATC04_16220 bbc047bae81822f6d4a5f2097c6eb986 237 Pfam PF02592 Putative vitamin uptake transporter 57 218 7.2E-43 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 ATC04_16220 bbc047bae81822f6d4a5f2097c6eb986 237 Hamap MF_02088 Probable queuosine precursor transporter. 24 230 14.683 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 ATC04_06750 96bb0ddfb9a541e4ddf640138c4bdaf4 386 SUPERFAMILY SSF69572 13 254 1.7E-76 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ATC04_06750 96bb0ddfb9a541e4ddf640138c4bdaf4 386 Gene3D G3DSA:3.40.250.10 278 381 9.3E-15 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_06750 96bb0ddfb9a541e4ddf640138c4bdaf4 386 Pfam PF00899 ThiF family 22 254 1.1E-54 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ATC04_06750 96bb0ddfb9a541e4ddf640138c4bdaf4 386 SUPERFAMILY SSF52821 273 379 1.24E-18 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_06750 96bb0ddfb9a541e4ddf640138c4bdaf4 386 Gene3D G3DSA:3.40.50.720 14 260 2.1E-75 T 11-10-2018 ATC04_06750 96bb0ddfb9a541e4ddf640138c4bdaf4 386 SMART SM00450 282 381 6.6E-11 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_06750 96bb0ddfb9a541e4ddf640138c4bdaf4 386 Pfam PF00581 Rhodanese-like domain 294 377 4.2E-8 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_07320 93db545c96598f6b19265f769dd980d9 530 SUPERFAMILY SSF53623 133 356 1.3E-65 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATC04_07320 93db545c96598f6b19265f769dd980d9 530 Pfam PF01225 Mur ligase family, catalytic domain 49 95 1.8E-5 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ATC04_07320 93db545c96598f6b19265f769dd980d9 530 SUPERFAMILY SSF63418 41 126 1.07E-15 T 11-10-2018 IPR035911 MurE/MurF, N-terminal ATC04_07320 93db545c96598f6b19265f769dd980d9 530 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 48 521 7.3E-128 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 ATC04_07320 93db545c96598f6b19265f769dd980d9 530 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 135 159 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 ATC04_07320 93db545c96598f6b19265f769dd980d9 530 Gene3D G3DSA:3.90.190.20 366 524 6.4E-47 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATC04_07320 93db545c96598f6b19265f769dd980d9 530 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 24 521 29.455 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 ATC04_07320 93db545c96598f6b19265f769dd980d9 530 Gene3D G3DSA:3.40.1390.10 23 127 4.4E-24 T 11-10-2018 ATC04_07320 93db545c96598f6b19265f769dd980d9 530 Pfam PF08245 Mur ligase middle domain 137 339 5.7E-45 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ATC04_07320 93db545c96598f6b19265f769dd980d9 530 Gene3D G3DSA:3.40.1190.10 129 358 3.2E-74 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATC04_07320 93db545c96598f6b19265f769dd980d9 530 Pfam PF02875 Mur ligase family, glutamate ligase domain 364 446 2.2E-19 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ATC04_07320 93db545c96598f6b19265f769dd980d9 530 SUPERFAMILY SSF53244 364 521 5.34E-41 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATC04_16160 6d63fe631ada177bfa04b357f4aa1165 148 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 147 21.925 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ATC04_16160 6d63fe631ada177bfa04b357f4aa1165 148 SUPERFAMILY SSF75217 1 146 9.81E-42 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ATC04_16160 6d63fe631ada177bfa04b357f4aa1165 148 Pfam PF02590 Predicted SPOUT methyltransferase 1 146 9.3E-46 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ATC04_16160 6d63fe631ada177bfa04b357f4aa1165 148 Gene3D G3DSA:3.40.1280.10 1 148 2.5E-47 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATC04_16160 6d63fe631ada177bfa04b357f4aa1165 148 PIRSF PIRSF004505 1 147 4.6E-44 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 Gene3D G3DSA:3.90.960.10 241 418 7.8E-207 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 Pfam PF04073 Aminoacyl-tRNA editing domain 258 408 2.2E-19 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 Pfam PF03129 Anticodon binding domain 507 593 8.1E-14 T 11-10-2018 IPR004154 Anticodon-binding ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 SUPERFAMILY SSF55681 12 507 5.35E-88 T 11-10-2018 ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 PRINTS PR01046 Prolyl-tRNA synthetase signature 146 157 4.2E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 PRINTS PR01046 Prolyl-tRNA synthetase signature 106 117 4.2E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 PRINTS PR01046 Prolyl-tRNA synthetase signature 70 88 4.2E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 PRINTS PR01046 Prolyl-tRNA synthetase signature 136 144 4.2E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 Gene3D G3DSA:3.30.930.10 13 494 7.8E-207 T 11-10-2018 ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 3 590 3.3E-165 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 Gene3D G3DSA:3.40.50.800 6 581 7.8E-207 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 SUPERFAMILY SSF52954 492 591 3.6E-23 T 11-10-2018 ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 Hamap MF_01569 Proline--tRNA ligase [proS]. 3 595 35.737 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 96 487 2.5E-41 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_13155 8ec16e84bae1a4178241480a219b5f21 595 SUPERFAMILY SSF55826 259 408 1.02E-7 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ATC04_13880 79e88c21451d08123dba8c757f6a30c0 98 SUPERFAMILY SSF46785 1 88 1.18E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_13880 79e88c21451d08123dba8c757f6a30c0 98 SMART SM00418 3 91 3.2E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_13880 79e88c21451d08123dba8c757f6a30c0 98 Pfam PF12840 Helix-turn-helix domain 2 68 8.2E-16 T 11-10-2018 ATC04_13880 79e88c21451d08123dba8c757f6a30c0 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 2.8E-5 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_13880 79e88c21451d08123dba8c757f6a30c0 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 2.8E-5 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_13880 79e88c21451d08123dba8c757f6a30c0 98 Gene3D G3DSA:1.10.10.10 1 86 1.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_17330 e7461b21492508998658814a82a541e9 297 Gene3D G3DSA:3.40.50.1820 3 292 3.3E-94 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_17330 e7461b21492508998658814a82a541e9 297 SUPERFAMILY SSF53474 4 274 8.44E-72 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_17330 e7461b21492508998658814a82a541e9 297 PRINTS PR00412 Epoxide hydrolase signature 184 197 1.6E-12 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_17330 e7461b21492508998658814a82a541e9 297 PRINTS PR00412 Epoxide hydrolase signature 170 183 1.6E-12 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_17330 e7461b21492508998658814a82a541e9 297 PRINTS PR00412 Epoxide hydrolase signature 99 117 1.6E-12 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_17330 e7461b21492508998658814a82a541e9 297 PRINTS PR00412 Epoxide hydrolase signature 125 140 1.6E-12 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_17330 e7461b21492508998658814a82a541e9 297 Pfam PF06441 Epoxide hydrolase N terminus 5 108 4.0E-31 T 11-10-2018 IPR010497 Epoxide hydrolase, N-terminal Reactome: R-HSA-211945 ATC04_17330 e7461b21492508998658814a82a541e9 297 PIRSF PIRSF001112 2 296 5.5E-83 T 11-10-2018 IPR016292 Epoxide hydrolase GO:0033961 Reactome: R-HSA-211945 ATC04_02710 aff33240795f8969fa606633af57d038 437 ProSitePatterns PS00217 Sugar transport proteins signature 2. 130 155 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_02710 aff33240795f8969fa606633af57d038 437 SUPERFAMILY SSF103473 14 433 1.83E-59 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_02710 aff33240795f8969fa606633af57d038 437 Pfam PF00083 Sugar (and other) transporter 23 222 1.0E-23 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_02710 aff33240795f8969fa606633af57d038 437 Gene3D G3DSA:1.20.1250.20 16 436 5.5E-58 T 11-10-2018 ATC04_04420 28e6c4f003d0950a0928589a36a80515 352 SUPERFAMILY SSF81345 22 344 1.24E-58 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_04420 28e6c4f003d0950a0928589a36a80515 352 Pfam PF01032 FecCD transport family 38 344 5.2E-68 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ATC04_04420 28e6c4f003d0950a0928589a36a80515 352 Gene3D G3DSA:1.10.3470.10 22 350 9.5E-74 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_10380 8284afe7c4ad4184cf4ee242f753f521 180 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 2 164 21.865 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ATC04_10380 8284afe7c4ad4184cf4ee242f753f521 180 Gene3D G3DSA:2.40.30.60 3 88 1.0E-20 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 ATC04_10380 8284afe7c4ad4184cf4ee242f753f521 180 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 3 164 1.3E-38 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ATC04_10380 8284afe7c4ad4184cf4ee242f753f521 180 Gene3D G3DSA:2.30.30.240 91 170 1.4E-11 T 11-10-2018 ATC04_10380 8284afe7c4ad4184cf4ee242f753f521 180 SUPERFAMILY SSF50346 95 164 5.18E-14 T 11-10-2018 IPR011033 PRC-barrel-like superfamily ATC04_10380 8284afe7c4ad4184cf4ee242f753f521 180 SUPERFAMILY SSF50447 3 88 1.45E-17 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ATC04_10380 8284afe7c4ad4184cf4ee242f753f521 180 Pfam PF01782 RimM N-terminal domain 4 83 1.6E-21 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 ATC04_03050 f296bfccb42a799fe8b693fea3c8e15b 242 Pfam PF08808 RES domain 13 208 1.5E-11 T 11-10-2018 IPR014914 RES domain ATC04_11015 54ac65216675801871336e4dcb3441c0 302 Gene3D G3DSA:3.90.550.10 1 291 2.9E-77 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_11015 54ac65216675801871336e4dcb3441c0 302 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 285 2.2E-142 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 ATC04_11015 54ac65216675801871336e4dcb3441c0 302 SUPERFAMILY SSF53448 1 286 5.84E-82 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_11015 54ac65216675801871336e4dcb3441c0 302 Pfam PF00483 Nucleotidyl transferase 3 237 1.9E-65 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ATC04_10750 ac910aab8f4f59d71ebdd17f29b82a76 352 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 335 8.8E-92 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ATC04_10750 ac910aab8f4f59d71ebdd17f29b82a76 352 Hamap MF_01035 3-isopropylmalate dehydrogenase [leuB]. 5 351 56.509 T 11-10-2018 IPR023698 3-isopropylmalate dehydrogenase GO:0003862|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 ATC04_10750 ac910aab8f4f59d71ebdd17f29b82a76 352 Gene3D G3DSA:3.40.718.10 4 351 6.0E-128 T 11-10-2018 ATC04_10750 ac910aab8f4f59d71ebdd17f29b82a76 352 SUPERFAMILY SSF53659 3 351 4.61E-110 T 11-10-2018 ATC04_10750 ac910aab8f4f59d71ebdd17f29b82a76 352 SMART SM01329 6 347 1.0E-159 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ATC04_10750 ac910aab8f4f59d71ebdd17f29b82a76 352 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 ATC04_10530 5cd5bced9c052b090672c7b67ca69d1d 271 SUPERFAMILY SSF56601 19 261 2.15E-46 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ATC04_10530 5cd5bced9c052b090672c7b67ca69d1d 271 Pfam PF00144 Beta-lactamase 33 258 7.8E-29 T 11-10-2018 IPR001466 Beta-lactamase-related ATC04_10530 5cd5bced9c052b090672c7b67ca69d1d 271 Gene3D G3DSA:3.40.710.10 2 271 1.8E-65 T 11-10-2018 ATC04_07270 ff63df5917d73a747d3e94635b3b48de 494 Pfam PF07568 Histidine kinase 295 360 4.4E-19 T 11-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain ATC04_07270 ff63df5917d73a747d3e94635b3b48de 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 393 489 4.1E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_07270 ff63df5917d73a747d3e94635b3b48de 494 Pfam PF08448 PAS fold 177 281 3.4E-6 T 11-10-2018 IPR013656 PAS fold-4 ATC04_07270 ff63df5917d73a747d3e94635b3b48de 494 SUPERFAMILY SSF55785 178 286 2.88E-9 T 11-10-2018 IPR035965 PAS domain superfamily ATC04_07270 ff63df5917d73a747d3e94635b3b48de 494 Gene3D G3DSA:3.30.450.20 134 281 1.6E-44 T 11-10-2018 ATC04_07270 ff63df5917d73a747d3e94635b3b48de 494 SMART SM00387 389 490 1.6E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_07270 ff63df5917d73a747d3e94635b3b48de 494 Pfam PF12282 Signal transduction histidine kinase 8 148 2.5E-42 T 11-10-2018 IPR022066 Signal transduction histidine kinase, N-terminal ATC04_07270 ff63df5917d73a747d3e94635b3b48de 494 Gene3D G3DSA:3.30.565.10 351 492 4.8E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_07270 ff63df5917d73a747d3e94635b3b48de 494 SUPERFAMILY SSF55874 356 488 1.24E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_07270 ff63df5917d73a747d3e94635b3b48de 494 Gene3D G3DSA:3.30.450.280 1 132 5.5E-39 T 11-10-2018 IPR038424 Signal transduction histidine kinase, N-terminal domain superfamily ATC04_02915 a4cf309ff92119b3ef8d0b958e6d7d7a 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 127 1.2E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_02915 a4cf309ff92119b3ef8d0b958e6d7d7a 140 Gene3D G3DSA:3.10.180.10 1 140 2.5E-47 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_02915 a4cf309ff92119b3ef8d0b958e6d7d7a 140 SUPERFAMILY SSF54593 3 133 1.01E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 1.4E-70 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 1.4E-70 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 1.4E-70 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 1.4E-70 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 1.4E-70 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 262 284 1.4E-70 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.4E-70 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 1.4E-70 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 5 24 1.4E-70 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 ProSitePatterns PS00433 Phosphofructokinase signature. 266 284 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 1 342 39.452 T 11-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 PIRSF PIRSF000532 1 340 4.6E-113 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 TIGRFAM TIGR02483 PFK_mixed: phosphofructokinase 2 322 3.0E-137 T 11-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 Gene3D G3DSA:3.40.50.460 141 278 4.1E-104 T 11-10-2018 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 Pfam PF00365 Phosphofructokinase 2 296 2.7E-100 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 SUPERFAMILY SSF53784 1 336 2.75E-114 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATC04_05980 689ab5c47a8460d2b7ac1587fdcc089a 342 Gene3D G3DSA:3.40.50.450 3 322 4.1E-104 T 11-10-2018 ATC04_11485 5d31e257b3d245d742073801b047b0f6 501 Pfam PF00171 Aldehyde dehydrogenase family 23 487 6.7E-174 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_11485 5d31e257b3d245d742073801b047b0f6 501 Gene3D G3DSA:3.40.309.10 263 457 5.4E-179 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_11485 5d31e257b3d245d742073801b047b0f6 501 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 14 501 4.7E-205 T 11-10-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 ATC04_11485 5d31e257b3d245d742073801b047b0f6 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ATC04_11485 5d31e257b3d245d742073801b047b0f6 501 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ATC04_11485 5d31e257b3d245d742073801b047b0f6 501 SUPERFAMILY SSF53720 10 494 7.2E-169 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_11485 5d31e257b3d245d742073801b047b0f6 501 Gene3D G3DSA:3.40.605.10 18 483 5.4E-179 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 SUPERFAMILY SSF52029 184 374 6.88E-78 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 523 2.6E-90 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 PRINTS PR00298 60kDa chaperonin signature 348 373 1.2E-67 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 PRINTS PR00298 60kDa chaperonin signature 266 289 1.2E-67 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 PRINTS PR00298 60kDa chaperonin signature 82 109 1.2E-67 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 PRINTS PR00298 60kDa chaperonin signature 26 52 1.2E-67 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 PRINTS PR00298 60kDa chaperonin signature 396 417 1.2E-67 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 SUPERFAMILY SSF48592 6 519 5.16E-71 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 Gene3D G3DSA:3.50.7.10 190 370 1.0E-214 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 SUPERFAMILY SSF54849 137 203 1.95E-24 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 Gene3D G3DSA:1.10.560.10 7 519 1.0E-214 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 544 39.975 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 Gene3D G3DSA:3.30.260.10 135 408 1.0E-214 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ATC04_15320 6d7396013b779c37b42d3a562ef9b91b 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 523 4.1E-237 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_03270 7c570ccd9d6e146addfc604da14e1f72 470 Gene3D G3DSA:1.10.275.10 7 145 1.9E-56 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal ATC04_03270 7c570ccd9d6e146addfc604da14e1f72 470 Pfam PF10415 Fumarase C C-terminus 414 466 3.6E-18 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATC04_03270 7c570ccd9d6e146addfc604da14e1f72 470 Gene3D G3DSA:1.10.40.30 414 465 5.4E-18 T 11-10-2018 ATC04_03270 7c570ccd9d6e146addfc604da14e1f72 470 Gene3D G3DSA:1.20.200.10 146 413 7.8E-109 T 11-10-2018 ATC04_03270 7c570ccd9d6e146addfc604da14e1f72 470 Pfam PF00206 Lyase 18 348 1.9E-95 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal ATC04_03270 7c570ccd9d6e146addfc604da14e1f72 470 PRINTS PR00149 Fumarate lyase superfamily signature 186 204 8.8E-28 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_03270 7c570ccd9d6e146addfc604da14e1f72 470 PRINTS PR00149 Fumarate lyase superfamily signature 277 304 8.8E-28 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_03270 7c570ccd9d6e146addfc604da14e1f72 470 PRINTS PR00149 Fumarate lyase superfamily signature 141 159 8.8E-28 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_03270 7c570ccd9d6e146addfc604da14e1f72 470 PRINTS PR00149 Fumarate lyase superfamily signature 323 339 8.8E-28 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_03270 7c570ccd9d6e146addfc604da14e1f72 470 SUPERFAMILY SSF48557 9 464 2.36E-147 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 ATC04_03270 7c570ccd9d6e146addfc604da14e1f72 470 ProSitePatterns PS00163 Fumarate lyases signature. 323 332 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ATC04_16655 fbbe74853a60cd446c90984e25c73691 168 Pfam PF04542 Sigma-70 region 2 12 80 4.8E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_16655 fbbe74853a60cd446c90984e25c73691 168 Gene3D G3DSA:1.10.1740.10 1 76 2.2E-15 T 11-10-2018 ATC04_16655 fbbe74853a60cd446c90984e25c73691 168 SUPERFAMILY SSF88659 97 161 3.71E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ATC04_16655 fbbe74853a60cd446c90984e25c73691 168 Gene3D G3DSA:1.10.10.10 96 168 3.1E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16655 fbbe74853a60cd446c90984e25c73691 168 SUPERFAMILY SSF88946 4 93 9.42E-19 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_16655 fbbe74853a60cd446c90984e25c73691 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 160 5.7E-27 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ATC04_16655 fbbe74853a60cd446c90984e25c73691 168 Pfam PF08281 Sigma-70, region 4 106 151 5.4E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATC04_09180 9b1617ab0c668195c34ce61c0e943064 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 140 7.4E-47 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 ATC04_09180 9b1617ab0c668195c34ce61c0e943064 145 SUPERFAMILY SSF69500 1 140 5.76E-44 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily ATC04_09180 9b1617ab0c668195c34ce61c0e943064 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 141 7.6E-41 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 ATC04_09180 9b1617ab0c668195c34ce61c0e943064 145 Gene3D G3DSA:3.50.80.10 1 144 1.5E-42 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily ATC04_09180 9b1617ab0c668195c34ce61c0e943064 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 141 28.665 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 ATC04_15955 a7a2a37780a941ff93538d08f226a71e 346 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 9 346 5.0E-113 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15955 a7a2a37780a941ff93538d08f226a71e 346 SMART SM00729 18 232 7.0E-11 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ATC04_15955 a7a2a37780a941ff93538d08f226a71e 346 Gene3D G3DSA:3.20.20.70 6 346 3.7E-93 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_15955 a7a2a37780a941ff93538d08f226a71e 346 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 24 35 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15955 a7a2a37780a941ff93538d08f226a71e 346 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 9 346 40.774 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15955 a7a2a37780a941ff93538d08f226a71e 346 Pfam PF13394 4Fe-4S single cluster domain 25 116 1.9E-5 T 11-10-2018 ATC04_15955 a7a2a37780a941ff93538d08f226a71e 346 Pfam PF06463 Molybdenum Cofactor Synthesis C 200 325 8.7E-38 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15955 a7a2a37780a941ff93538d08f226a71e 346 Pfam PF04055 Radical SAM superfamily 22 191 4.7E-28 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ATC04_15955 a7a2a37780a941ff93538d08f226a71e 346 SUPERFAMILY SSF102114 10 295 4.32E-74 T 11-10-2018 ATC04_07410 0976ae6acf5dd93e5e413cdda29d6850 291 Gene3D G3DSA:3.90.230.10 9 291 1.7E-110 T 11-10-2018 ATC04_07410 0976ae6acf5dd93e5e413cdda29d6850 291 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 46 289 7.2E-91 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_07410 0976ae6acf5dd93e5e413cdda29d6850 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 109 122 4.4E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_07410 0976ae6acf5dd93e5e413cdda29d6850 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 233 245 4.4E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_07410 0976ae6acf5dd93e5e413cdda29d6850 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 201 213 4.4E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_07410 0976ae6acf5dd93e5e413cdda29d6850 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 131 147 4.4E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_07410 0976ae6acf5dd93e5e413cdda29d6850 291 SUPERFAMILY SSF55920 7 290 7.33E-85 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like ATC04_07410 0976ae6acf5dd93e5e413cdda29d6850 291 Pfam PF00557 Metallopeptidase family M24 53 282 1.2E-48 T 11-10-2018 IPR000994 Peptidase M24 ATC04_07410 0976ae6acf5dd93e5e413cdda29d6850 291 Hamap MF_01974 Methionine aminopeptidase [map]. 44 291 40.214 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_07410 0976ae6acf5dd93e5e413cdda29d6850 291 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 207 225 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ATC04_06145 a2e344b2651b3b46135e554f05680616 87 Pfam PF00831 Ribosomal L29 protein 14 67 2.1E-21 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06145 a2e344b2651b3b46135e554f05680616 87 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 8 67 14.707 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06145 a2e344b2651b3b46135e554f05680616 87 TIGRFAM TIGR00012 L29: ribosomal protein uL29 21 67 3.0E-17 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06145 a2e344b2651b3b46135e554f05680616 87 Gene3D G3DSA:1.10.287.310 8 73 1.8E-22 T 11-10-2018 ATC04_06145 a2e344b2651b3b46135e554f05680616 87 SUPERFAMILY SSF46561 11 70 1.7E-18 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 SUPERFAMILY SSF55681 6 370 5.77E-118 T 11-10-2018 ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 SUPERFAMILY SSF52954 354 459 6.19E-35 T 11-10-2018 ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 Pfam PF03129 Anticodon binding domain 367 456 9.5E-24 T 11-10-2018 IPR004154 Anticodon-binding ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 4 459 48.031 T 11-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 159 334 9.1E-10 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 138 150 1.3E-52 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 159 176 1.3E-52 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 404 423 1.3E-52 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 191 208 1.3E-52 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 208 218 1.3E-52 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 26 40 1.3E-52 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 PRINTS PR01043 Glycyl-tRNA synthetase signature 318 330 1.3E-52 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 7 231 5.7E-79 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATC04_13510 a4a54525641651fbe9c873a34c522ea9 461 Gene3D G3DSA:3.40.50.800 365 461 2.2E-33 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily ATC04_09690 f3e5b7d6a54b93b9f49dacf1ef68e638 365 Gene3D G3DSA:3.40.50.150 91 292 1.7E-54 T 11-10-2018 ATC04_09690 f3e5b7d6a54b93b9f49dacf1ef68e638 365 Pfam PF14801 tRNA methyltransferase complex GCD14 subunit N-term 26 76 3.6E-27 T 11-10-2018 ATC04_09690 f3e5b7d6a54b93b9f49dacf1ef68e638 365 Pfam PF08704 tRNA methyltransferase complex GCD14 subunit 94 263 1.3E-20 T 11-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 ATC04_09690 f3e5b7d6a54b93b9f49dacf1ef68e638 365 SUPERFAMILY SSF53335 28 285 7.01E-64 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_09690 f3e5b7d6a54b93b9f49dacf1ef68e638 365 Gene3D G3DSA:3.10.330.20 23 89 1.1E-22 T 11-10-2018 ATC04_10680 76b5f5188c473bc9883494d3326a86e0 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 191 37.304 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 ATC04_10680 76b5f5188c473bc9883494d3326a86e0 201 Pfam PF00694 Aconitase C-terminal domain 1 116 9.9E-24 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 ATC04_10680 76b5f5188c473bc9883494d3326a86e0 201 SUPERFAMILY SSF52016 3 187 5.69E-51 T 11-10-2018 ATC04_10680 76b5f5188c473bc9883494d3326a86e0 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 180 2.9E-56 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 ATC04_10680 76b5f5188c473bc9883494d3326a86e0 201 Gene3D G3DSA:3.20.19.10 1 168 8.0E-65 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ATC04_04740 2171faa307fa7527d7dbb071efb9784b 330 SUPERFAMILY SSF51735 32 275 6.29E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_04740 2171faa307fa7527d7dbb071efb9784b 330 Gene3D G3DSA:3.40.50.720 31 322 2.9E-52 T 11-10-2018 ATC04_04740 2171faa307fa7527d7dbb071efb9784b 330 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 35 52 1.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04740 2171faa307fa7527d7dbb071efb9784b 330 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 109 120 1.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04740 2171faa307fa7527d7dbb071efb9784b 330 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 212 1.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04740 2171faa307fa7527d7dbb071efb9784b 330 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 280 300 1.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04740 2171faa307fa7527d7dbb071efb9784b 330 Pfam PF00106 short chain dehydrogenase 35 227 4.8E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_14670 93d201825b8c10681534e5c01e3f3719 191 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_14670 93d201825b8c10681534e5c01e3f3719 191 Gene3D G3DSA:3.40.50.1390 3 132 1.4E-36 T 11-10-2018 ATC04_14670 93d201825b8c10681534e5c01e3f3719 191 Gene3D G3DSA:1.10.10.60 147 190 8.9E-6 T 11-10-2018 ATC04_14670 93d201825b8c10681534e5c01e3f3719 191 SMART SM00857 4 144 7.8E-43 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_14670 93d201825b8c10681534e5c01e3f3719 191 SUPERFAMILY SSF53041 3 142 4.84E-36 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ATC04_14670 93d201825b8c10681534e5c01e3f3719 191 Pfam PF00239 Resolvase, N terminal domain 5 142 7.6E-37 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_14670 93d201825b8c10681534e5c01e3f3719 191 Pfam PF02796 Helix-turn-helix domain of resolvase 147 186 4.3E-8 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 ATC04_14670 93d201825b8c10681534e5c01e3f3719 191 SUPERFAMILY SSF46689 147 188 1.14E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_03765 54b679023bbe334ac1329f5a64529cd6 508 PIRSF PIRSF006060 12 500 7.5E-52 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_03765 54b679023bbe334ac1329f5a64529cd6 508 Pfam PF13520 Amino acid permease 34 470 2.0E-26 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_03765 54b679023bbe334ac1329f5a64529cd6 508 Gene3D G3DSA:1.20.1740.10 23 493 5.4E-40 T 11-10-2018 ATC04_06410 46b3a72bf281086423ed437f4a35e211 269 SUPERFAMILY SSF53335 41 216 5.47E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_06410 46b3a72bf281086423ed437f4a35e211 269 Pfam PF08241 Methyltransferase domain 69 164 2.4E-16 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ATC04_06410 46b3a72bf281086423ed437f4a35e211 269 Gene3D G3DSA:3.40.50.150 3 228 2.3E-38 T 11-10-2018 ATC04_01405 48067ea5e50d9b7e425814dea176fcb9 406 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 403 6.4E-131 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_01405 48067ea5e50d9b7e425814dea176fcb9 406 ProSitePatterns PS00737 Thiolases signature 2. 351 367 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ATC04_01405 48067ea5e50d9b7e425814dea176fcb9 406 Pfam PF02803 Thiolase, C-terminal domain 282 404 6.1E-47 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ATC04_01405 48067ea5e50d9b7e425814dea176fcb9 406 Pfam PF00108 Thiolase, N-terminal domain 5 274 3.9E-61 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ATC04_01405 48067ea5e50d9b7e425814dea176fcb9 406 SUPERFAMILY SSF53901 3 281 3.78E-66 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_01405 48067ea5e50d9b7e425814dea176fcb9 406 PIRSF PIRSF000429 1 406 7.3E-124 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_01405 48067ea5e50d9b7e425814dea176fcb9 406 SUPERFAMILY SSF53901 283 404 3.46E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_01405 48067ea5e50d9b7e425814dea176fcb9 406 Gene3D G3DSA:3.40.47.10 6 288 1.6E-129 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_01405 48067ea5e50d9b7e425814dea176fcb9 406 Gene3D G3DSA:3.40.47.10 149 401 1.6E-129 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_04070 e1cf708648e050aaa347e1c73f4a8b07 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 261 9.7E-47 T 11-10-2018 IPR000150 Cof family GO:0016787 ATC04_04070 e1cf708648e050aaa347e1c73f4a8b07 271 Gene3D G3DSA:3.40.50.1000 13 261 6.8E-70 T 11-10-2018 IPR023214 HAD superfamily ATC04_04070 e1cf708648e050aaa347e1c73f4a8b07 271 Gene3D G3DSA:3.30.1240.10 88 191 6.8E-70 T 11-10-2018 ATC04_04070 e1cf708648e050aaa347e1c73f4a8b07 271 SUPERFAMILY SSF56784 10 265 3.84E-60 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_04070 e1cf708648e050aaa347e1c73f4a8b07 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 261 1.5E-48 T 11-10-2018 ATC04_04070 e1cf708648e050aaa347e1c73f4a8b07 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 234 5.0E-18 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ATC04_01700 470b8beb26b07dd58082c7973ee6b142 418 Pfam PF01321 Creatinase/Prolidase N-terminal domain 38 172 3.8E-16 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 ATC04_01700 470b8beb26b07dd58082c7973ee6b142 418 SUPERFAMILY SSF53092 15 170 6.28E-39 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ATC04_01700 470b8beb26b07dd58082c7973ee6b142 418 Gene3D G3DSA:3.40.350.10 14 170 1.4E-45 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ATC04_01700 470b8beb26b07dd58082c7973ee6b142 418 Gene3D G3DSA:3.90.230.10 171 417 1.3E-52 T 11-10-2018 ATC04_01700 470b8beb26b07dd58082c7973ee6b142 418 SUPERFAMILY SSF55920 172 411 9.94E-59 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like ATC04_01700 470b8beb26b07dd58082c7973ee6b142 418 Pfam PF00557 Metallopeptidase family M24 181 395 1.0E-27 T 11-10-2018 IPR000994 Peptidase M24 ATC04_08465 8e19ec68357c0fab4d43979f4fe114bf 430 SMART SM01086 322 416 2.2E-31 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ATC04_08465 8e19ec68357c0fab4d43979f4fe114bf 430 SMART SM00382 120 338 1.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_08465 8e19ec68357c0fab4d43979f4fe114bf 430 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 8 416 9.8E-192 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ATC04_08465 8e19ec68357c0fab4d43979f4fe114bf 430 Gene3D G3DSA:3.30.50.30 3 50 1.3E-21 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily ATC04_08465 8e19ec68357c0fab4d43979f4fe114bf 430 Gene3D G3DSA:3.40.50.300 54 319 8.4E-103 T 11-10-2018 ATC04_08465 8e19ec68357c0fab4d43979f4fe114bf 430 Pfam PF07724 AAA domain (Cdc48 subfamily) 121 316 3.9E-48 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ATC04_08465 8e19ec68357c0fab4d43979f4fe114bf 430 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 322 400 2.2E-14 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ATC04_08465 8e19ec68357c0fab4d43979f4fe114bf 430 Pfam PF06689 ClpX C4-type zinc finger 12 48 1.3E-18 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ATC04_08465 8e19ec68357c0fab4d43979f4fe114bf 430 SMART SM00994 10 49 4.9E-21 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ATC04_08465 8e19ec68357c0fab4d43979f4fe114bf 430 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 420 51.119 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ATC04_08465 8e19ec68357c0fab4d43979f4fe114bf 430 SUPERFAMILY SSF57716 11 46 1.1E-10 T 11-10-2018 ATC04_08465 8e19ec68357c0fab4d43979f4fe114bf 430 SUPERFAMILY SSF52540 61 409 1.67E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08465 8e19ec68357c0fab4d43979f4fe114bf 430 Gene3D G3DSA:1.10.8.60 321 429 7.1E-37 T 11-10-2018 ATC04_15930 75afd0ba6541ebd49bbbff9fb0b1edb2 288 Gene3D G3DSA:3.90.550.10 3 203 1.1E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_15930 75afd0ba6541ebd49bbbff9fb0b1edb2 288 SUPERFAMILY SSF53448 6 190 4.96E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_15930 75afd0ba6541ebd49bbbff9fb0b1edb2 288 Pfam PF12804 MobA-like NTP transferase domain 8 167 1.9E-23 T 11-10-2018 IPR025877 MobA-like NTP transferase ATC04_07495 1ca8576ff3ce83b4e8e61d5383f62b66 504 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 25 146 2.9E-19 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ATC04_07495 1ca8576ff3ce83b4e8e61d5383f62b66 504 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 9 502 33.165 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 ATC04_07495 1ca8576ff3ce83b4e8e61d5383f62b66 504 Gene3D G3DSA:3.40.630.10 175 500 1.8E-124 T 11-10-2018 ATC04_07495 1ca8576ff3ce83b4e8e61d5383f62b66 504 PRINTS PR00481 Cytosol aminopeptidase signature 260 277 3.2E-48 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATC04_07495 1ca8576ff3ce83b4e8e61d5383f62b66 504 PRINTS PR00481 Cytosol aminopeptidase signature 319 340 3.2E-48 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATC04_07495 1ca8576ff3ce83b4e8e61d5383f62b66 504 PRINTS PR00481 Cytosol aminopeptidase signature 282 303 3.2E-48 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATC04_07495 1ca8576ff3ce83b4e8e61d5383f62b66 504 PRINTS PR00481 Cytosol aminopeptidase signature 341 361 3.2E-48 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATC04_07495 1ca8576ff3ce83b4e8e61d5383f62b66 504 PRINTS PR00481 Cytosol aminopeptidase signature 369 384 3.2E-48 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATC04_07495 1ca8576ff3ce83b4e8e61d5383f62b66 504 SUPERFAMILY SSF53187 180 499 3.14E-108 T 11-10-2018 ATC04_07495 1ca8576ff3ce83b4e8e61d5383f62b66 504 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 345 352 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ATC04_07495 1ca8576ff3ce83b4e8e61d5383f62b66 504 SUPERFAMILY SSF52949 22 163 1.0E-21 T 11-10-2018 ATC04_07495 1ca8576ff3ce83b4e8e61d5383f62b66 504 Gene3D G3DSA:3.40.220.10 8 174 1.3E-27 T 11-10-2018 ATC04_07495 1ca8576ff3ce83b4e8e61d5383f62b66 504 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 185 494 4.5E-115 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ATC04_07780 bdb76c52eb3bf4f334563c798afaa08b 346 Gene3D G3DSA:3.40.50.300 15 199 1.5E-15 T 11-10-2018 ATC04_07780 bdb76c52eb3bf4f334563c798afaa08b 346 Pfam PF03969 AFG1-like ATPase 242 337 7.2E-14 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 ATC04_07780 bdb76c52eb3bf4f334563c798afaa08b 346 Pfam PF03969 AFG1-like ATPase 43 228 3.2E-41 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 ATC04_07780 bdb76c52eb3bf4f334563c798afaa08b 346 SUPERFAMILY SSF52540 78 184 7.43E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_14100 e4f6db3a0327e51b834ef51c7599fb9d 231 SUPERFAMILY SSF102588 8 202 9.42E-38 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ATC04_14100 e4f6db3a0327e51b834ef51c7599fb9d 231 Pfam PF02585 GlcNAc-PI de-N-acetylase 12 140 4.7E-26 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 ATC04_14100 e4f6db3a0327e51b834ef51c7599fb9d 231 Gene3D G3DSA:3.40.50.10320 1 228 7.7E-67 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ATC04_01630 2c985318a6f24cabdacde7b7f2b71e20 955 Gene3D G3DSA:2.60.40.10 766 858 5.5E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold ATC04_01630 2c985318a6f24cabdacde7b7f2b71e20 955 Gene3D G3DSA:2.60.40.10 859 954 2.2E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold ATC04_01630 2c985318a6f24cabdacde7b7f2b71e20 955 Gene3D G3DSA:2.120.10.10 46 422 6.1E-122 T 11-10-2018 ATC04_01630 2c985318a6f24cabdacde7b7f2b71e20 955 SUPERFAMILY SSF50939 57 414 1.71E-87 T 11-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 ATC04_01630 2c985318a6f24cabdacde7b7f2b71e20 955 Pfam PF13088 BNR repeat-like domain 78 393 8.0E-23 T 11-10-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 ATC04_01630 2c985318a6f24cabdacde7b7f2b71e20 955 SUPERFAMILY SSF81296 865 954 4.06E-13 T 11-10-2018 IPR014756 Immunoglobulin E-set ATC04_01630 2c985318a6f24cabdacde7b7f2b71e20 955 SUPERFAMILY SSF81296 775 862 1.16E-12 T 11-10-2018 IPR014756 Immunoglobulin E-set ATC04_01630 2c985318a6f24cabdacde7b7f2b71e20 955 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 671 692 2.0E-4 T 11-10-2018 IPR001434 Domain of unknown function DUF11 ATC04_16790 3181a47a85d84c0d472604fd9b9ed7c5 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 86 4.3E-26 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ATC04_16790 3181a47a85d84c0d472604fd9b9ed7c5 92 SUPERFAMILY SSF55594 1 90 3.14E-21 T 11-10-2018 IPR035895 HPr-like superfamily ATC04_16790 3181a47a85d84c0d472604fd9b9ed7c5 92 Gene3D G3DSA:3.30.1340.10 1 90 2.8E-23 T 11-10-2018 IPR035895 HPr-like superfamily ATC04_16790 3181a47a85d84c0d472604fd9b9ed7c5 92 PRINTS PR00107 Phosphocarrier protein signature 42 57 3.8E-9 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ATC04_16790 3181a47a85d84c0d472604fd9b9ed7c5 92 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.8E-9 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ATC04_16790 3181a47a85d84c0d472604fd9b9ed7c5 92 PRINTS PR00107 Phosphocarrier protein signature 57 74 3.8E-9 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ATC04_16790 3181a47a85d84c0d472604fd9b9ed7c5 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site ATC04_16790 3181a47a85d84c0d472604fd9b9ed7c5 92 Pfam PF00381 PTS HPr component phosphorylation site 3 86 9.5E-24 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ATC04_01020 b67aafac673355838f5c8b68ce4ec3a4 511 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 350 370 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ATC04_01020 b67aafac673355838f5c8b68ce4ec3a4 511 TIGRFAM TIGR03173 pbuX: xanthine permease 27 434 3.4E-152 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 ATC04_01020 b67aafac673355838f5c8b68ce4ec3a4 511 Pfam PF00860 Permease family 23 399 9.3E-87 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ATC04_01020 b67aafac673355838f5c8b68ce4ec3a4 511 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 20 432 2.6E-101 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ATC04_15630 08a9380d16636196c2e7cc428ee38383 237 Gene3D G3DSA:1.10.101.10 171 237 1.4E-10 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ATC04_15630 08a9380d16636196c2e7cc428ee38383 237 Gene3D G3DSA:2.70.70.10 1 154 2.6E-28 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_15630 08a9380d16636196c2e7cc428ee38383 237 Pfam PF01471 Putative peptidoglycan binding domain 179 234 2.4E-8 T 11-10-2018 IPR002477 Peptidoglycan binding-like ATC04_15630 08a9380d16636196c2e7cc428ee38383 237 Pfam PF01551 Peptidase family M23 26 127 7.1E-21 T 11-10-2018 IPR016047 Peptidase M23 ATC04_15630 08a9380d16636196c2e7cc428ee38383 237 SUPERFAMILY SSF47090 172 235 1.1E-9 T 11-10-2018 IPR036365 PGBD-like superfamily ATC04_15630 08a9380d16636196c2e7cc428ee38383 237 SUPERFAMILY SSF51261 4 128 3.14E-28 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_10315 a1b50a41807d698020bbb06752d2e41f 167 Pfam PF11343 Protein of unknown function (DUF3145) 9 165 5.2E-70 T 11-10-2018 IPR021491 Protein of unknown function DUF3145 ATC04_06760 4138784220e088a462c35445a368f4c2 635 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 50 65 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site ATC04_06760 4138784220e088a462c35445a368f4c2 635 Gene3D G3DSA:2.40.30.10 229 327 1.1E-28 T 11-10-2018 ATC04_06760 4138784220e088a462c35445a368f4c2 635 SUPERFAMILY SSF54980 331 416 9.59E-11 T 11-10-2018 IPR035647 EF-G domain III/V-like ATC04_06760 4138784220e088a462c35445a368f4c2 635 Gene3D G3DSA:3.30.70.870 335 618 9.6E-120 T 11-10-2018 ATC04_06760 4138784220e088a462c35445a368f4c2 635 Pfam PF00679 Elongation factor G C-terminus 425 508 1.4E-22 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like ATC04_06760 4138784220e088a462c35445a368f4c2 635 SUPERFAMILY SSF54980 427 541 2.06E-27 T 11-10-2018 IPR035647 EF-G domain III/V-like ATC04_06760 4138784220e088a462c35445a368f4c2 635 Gene3D G3DSA:2.40.50.250 511 626 9.6E-120 T 11-10-2018 ATC04_06760 4138784220e088a462c35445a368f4c2 635 Pfam PF03144 Elongation factor Tu domain 2 247 317 6.9E-12 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ATC04_06760 4138784220e088a462c35445a368f4c2 635 Pfam PF00009 Elongation factor Tu GTP binding domain 10 223 2.2E-51 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06760 4138784220e088a462c35445a368f4c2 635 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 147 1.2E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ATC04_06760 4138784220e088a462c35445a368f4c2 635 Gene3D G3DSA:3.40.50.300 8 226 9.5E-58 T 11-10-2018 ATC04_06760 4138784220e088a462c35445a368f4c2 635 SUPERFAMILY SSF52540 5 195 2.78E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06760 4138784220e088a462c35445a368f4c2 635 Gene3D G3DSA:3.30.70.240 418 510 9.6E-120 T 11-10-2018 ATC04_06760 4138784220e088a462c35445a368f4c2 635 PRINTS PR00315 GTP-binding elongation factor signature 84 94 3.4E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06760 4138784220e088a462c35445a368f4c2 635 PRINTS PR00315 GTP-binding elongation factor signature 13 26 3.4E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06760 4138784220e088a462c35445a368f4c2 635 PRINTS PR00315 GTP-binding elongation factor signature 136 145 3.4E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06760 4138784220e088a462c35445a368f4c2 635 PRINTS PR00315 GTP-binding elongation factor signature 57 65 3.4E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06760 4138784220e088a462c35445a368f4c2 635 PRINTS PR00315 GTP-binding elongation factor signature 100 111 3.4E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_06760 4138784220e088a462c35445a368f4c2 635 SMART SM00838 424 512 0.0018 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like ATC04_06760 4138784220e088a462c35445a368f4c2 635 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 11 627 1.8E-266 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 ATC04_06760 4138784220e088a462c35445a368f4c2 635 SUPERFAMILY SSF50447 208 328 2.24E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ATC04_01580 f92042a9411408e6237345576b2f5a5d 326 Gene3D G3DSA:3.40.50.620 7 185 3.6E-20 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_01580 f92042a9411408e6237345576b2f5a5d 326 SMART SM00893 9 197 6.7E-8 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_01580 f92042a9411408e6237345576b2f5a5d 326 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 264 290 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 ATC04_01580 f92042a9411408e6237345576b2f5a5d 326 SUPERFAMILY SSF52467 198 320 2.21E-46 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ATC04_01580 f92042a9411408e6237345576b2f5a5d 326 SUPERFAMILY SSF52402 8 189 8.12E-20 T 11-10-2018 ATC04_01580 f92042a9411408e6237345576b2f5a5d 326 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 201 282 7.2E-35 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 ATC04_01580 f92042a9411408e6237345576b2f5a5d 326 PIRSF PIRSF000089 6 325 1.0E-86 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 ATC04_01580 f92042a9411408e6237345576b2f5a5d 326 Pfam PF01012 Electron transfer flavoprotein domain 10 177 5.1E-16 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_01580 f92042a9411408e6237345576b2f5a5d 326 Gene3D G3DSA:3.40.50.1220 195 326 7.4E-56 T 11-10-2018 ATC04_09735 4df40e7e5262e239d475d15d0d2105dd 438 Pfam PF01546 Peptidase family M20/M25/M40 83 436 1.9E-31 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ATC04_09735 4df40e7e5262e239d475d15d0d2105dd 438 Gene3D G3DSA:3.40.630.10 5 204 1.2E-50 T 11-10-2018 ATC04_09735 4df40e7e5262e239d475d15d0d2105dd 438 Pfam PF07687 Peptidase dimerisation domain 198 336 1.2E-15 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ATC04_09735 4df40e7e5262e239d475d15d0d2105dd 438 SUPERFAMILY SSF55031 201 333 3.87E-11 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ATC04_09735 4df40e7e5262e239d475d15d0d2105dd 438 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 116 155 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 ATC04_09735 4df40e7e5262e239d475d15d0d2105dd 438 PIRSF PIRSF036696 5 241 9.4E-31 T 11-10-2018 ATC04_09735 4df40e7e5262e239d475d15d0d2105dd 438 PIRSF PIRSF036696 238 438 3.2E-8 T 11-10-2018 ATC04_09735 4df40e7e5262e239d475d15d0d2105dd 438 SUPERFAMILY SSF53187 5 437 3.71E-54 T 11-10-2018 ATC04_01205 cf1ae0715f13b518227a37bbd6adb602 236 SUPERFAMILY SSF48403 38 231 1.99E-40 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ATC04_01205 cf1ae0715f13b518227a37bbd6adb602 236 Pfam PF12796 Ankyrin repeats (3 copies) 115 206 5.2E-11 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain ATC04_01205 cf1ae0715f13b518227a37bbd6adb602 236 Gene3D G3DSA:1.25.40.20 38 234 3.5E-43 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ATC04_01205 cf1ae0715f13b518227a37bbd6adb602 236 SMART SM00248 171 205 0.49 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ATC04_01205 cf1ae0715f13b518227a37bbd6adb602 236 SMART SM00248 39 68 590.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ATC04_01205 cf1ae0715f13b518227a37bbd6adb602 236 SMART SM00248 72 101 16.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ATC04_01205 cf1ae0715f13b518227a37bbd6adb602 236 SMART SM00248 105 134 2800.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ATC04_01205 cf1ae0715f13b518227a37bbd6adb602 236 SMART SM00248 138 167 93.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ATC04_08395 f7e1b412de707950492c7bc6a3c97782 164 Pfam PF09278 MerR, DNA binding 58 123 5.4E-10 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding ATC04_08395 f7e1b412de707950492c7bc6a3c97782 164 SUPERFAMILY SSF46955 16 138 3.66E-24 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_08395 f7e1b412de707950492c7bc6a3c97782 164 Gene3D G3DSA:1.10.1660.10 7 139 4.0E-27 T 11-10-2018 ATC04_08395 f7e1b412de707950492c7bc6a3c97782 164 Pfam PF00376 MerR family regulatory protein 17 53 1.4E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_08395 f7e1b412de707950492c7bc6a3c97782 164 SMART SM00422 16 84 1.3E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_08395 f7e1b412de707950492c7bc6a3c97782 164 ProSitePatterns PS00552 MerR-type HTH domain signature. 19 41 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_08395 f7e1b412de707950492c7bc6a3c97782 164 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 28 6.5E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_08395 f7e1b412de707950492c7bc6a3c97782 164 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 51 71 6.5E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_08395 f7e1b412de707950492c7bc6a3c97782 164 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 28 41 6.5E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_08395 f7e1b412de707950492c7bc6a3c97782 164 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 16 155 1.0E-51 T 11-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 ATC04_06110 9ce612c25690aa5829195528f38118db 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 7 193 2.5E-69 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06110 9ce612c25690aa5829195528f38118db 200 Pfam PF00573 Ribosomal protein L4/L1 family 7 194 2.8E-63 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 ATC04_06110 9ce612c25690aa5829195528f38118db 200 SUPERFAMILY SSF52166 6 195 4.06E-70 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 ATC04_06110 9ce612c25690aa5829195528f38118db 200 Gene3D G3DSA:3.40.1370.10 1 200 5.2E-68 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 ATC04_06110 9ce612c25690aa5829195528f38118db 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 198 31.98 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_04210 0d54bc427dd404ef743b4d481424f568 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 60 1.7E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_04210 0d54bc427dd404ef743b4d481424f568 301 Gene3D G3DSA:3.40.190.290 95 298 9.3E-28 T 11-10-2018 ATC04_04210 0d54bc427dd404ef743b4d481424f568 301 SUPERFAMILY SSF53850 94 300 3.26E-27 T 11-10-2018 ATC04_04210 0d54bc427dd404ef743b4d481424f568 301 SUPERFAMILY SSF46785 2 113 3.16E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_04210 0d54bc427dd404ef743b4d481424f568 301 Pfam PF03466 LysR substrate binding domain 92 299 3.3E-28 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_04210 0d54bc427dd404ef743b4d481424f568 301 Gene3D G3DSA:1.10.10.10 1 90 9.5E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_06430 bf7e0fea27099855f1e22ba0c9644de7 383 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 17 314 1.5E-44 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 ATC04_06430 bf7e0fea27099855f1e22ba0c9644de7 383 SMART SM01240 15 383 1.7E-26 T 11-10-2018 ATC04_06430 bf7e0fea27099855f1e22ba0c9644de7 383 Gene3D G3DSA:3.20.20.70 16 376 1.1E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_06430 bf7e0fea27099855f1e22ba0c9644de7 383 TIGRFAM TIGR01304 IMP_DH_rel_2: IMP dehydrogenase family protein 5 374 1.2E-168 T 11-10-2018 IPR005992 IMP dehydrogenase-related 2 GO:0016491|GO:0055114 ATC04_06430 bf7e0fea27099855f1e22ba0c9644de7 383 SUPERFAMILY SSF51412 12 375 2.59E-70 T 11-10-2018 ATC04_17855 3b64d5f51053309960ba19ce8155cdfa 194 SUPERFAMILY SSF52821 7 112 6.81E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_17855 3b64d5f51053309960ba19ce8155cdfa 194 Pfam PF00581 Rhodanese-like domain 9 102 1.1E-15 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_17855 3b64d5f51053309960ba19ce8155cdfa 194 Gene3D G3DSA:3.40.250.10 6 110 9.6E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_17855 3b64d5f51053309960ba19ce8155cdfa 194 SMART SM00450 9 106 1.3E-21 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_17855 3b64d5f51053309960ba19ce8155cdfa 194 Pfam PF11127 Protein of unknown function (DUF2892) 116 174 5.8E-10 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 ATC04_17865 4849944aa033f0d0bc8735a023c4777c 85 Gene3D G3DSA:1.20.58.1000 5 84 1.5E-19 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily ATC04_17865 4849944aa033f0d0bc8735a023c4777c 85 Pfam PF02583 Metal-sensitive transcriptional repressor 9 74 6.7E-22 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 ATC04_15990 57c52b76513669223c6a922e737016a8 410 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 185 3.7E-36 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15990 57c52b76513669223c6a922e737016a8 410 Gene3D G3DSA:2.170.190.11 51 159 3.4E-88 T 11-10-2018 ATC04_15990 57c52b76513669223c6a922e737016a8 410 SMART SM00852 198 331 7.5E-32 T 11-10-2018 IPR001453 MoaB/Mog domain ATC04_15990 57c52b76513669223c6a922e737016a8 410 Gene3D G3DSA:3.90.105.10 31 192 3.4E-88 T 11-10-2018 ATC04_15990 57c52b76513669223c6a922e737016a8 410 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 194 327 9.7E-27 T 11-10-2018 IPR001453 MoaB/Mog domain ATC04_15990 57c52b76513669223c6a922e737016a8 410 Gene3D G3DSA:2.40.340.10 342 406 1.7E-10 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15990 57c52b76513669223c6a922e737016a8 410 SUPERFAMILY SSF53218 193 334 3.93E-30 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ATC04_15990 57c52b76513669223c6a922e737016a8 410 SUPERFAMILY SSF63867 343 408 7.19E-12 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15990 57c52b76513669223c6a922e737016a8 410 Gene3D G3DSA:3.40.980.10 193 330 3.4E-88 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ATC04_15990 57c52b76513669223c6a922e737016a8 410 Pfam PF03454 MoeA C-terminal region (domain IV) 344 406 1.5E-9 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15990 57c52b76513669223c6a922e737016a8 410 Pfam PF00994 Probable molybdopterin binding domain 199 330 2.0E-24 T 11-10-2018 IPR001453 MoaB/Mog domain ATC04_15990 57c52b76513669223c6a922e737016a8 410 SUPERFAMILY SSF63882 12 194 2.62E-36 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_06185 0f68d233ff77e107585721e1a04b7785 189 Pfam PF00673 ribosomal L5P family C-terminus 92 185 4.9E-38 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06185 0f68d233ff77e107585721e1a04b7785 189 Gene3D G3DSA:3.30.1440.10 7 187 1.9E-77 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06185 0f68d233ff77e107585721e1a04b7785 189 Pfam PF00281 Ribosomal protein L5 32 88 1.1E-29 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06185 0f68d233ff77e107585721e1a04b7785 189 PIRSF PIRSF002161 6 189 7.8E-64 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06185 0f68d233ff77e107585721e1a04b7785 189 ProSitePatterns PS00358 Ribosomal protein L5 signature. 65 81 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06185 0f68d233ff77e107585721e1a04b7785 189 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 9 187 43.417 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06185 0f68d233ff77e107585721e1a04b7785 189 SUPERFAMILY SSF55282 11 186 7.77E-75 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_15050 ff381ee7d8c5b8eec9a872c7a44ad03f 1107 SUPERFAMILY SSF52540 19 1059 2.72E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15050 ff381ee7d8c5b8eec9a872c7a44ad03f 1107 Pfam PF13555 P-loop containing region of AAA domain 20 77 2.7E-17 T 11-10-2018 ATC04_15050 ff381ee7d8c5b8eec9a872c7a44ad03f 1107 Pfam PF13558 Putative exonuclease SbcCD, C subunit 967 1053 3.3E-14 T 11-10-2018 ATC04_18180 3a00a95319cf14ae83cf1d6d83e61f65 86 Pfam PF04226 Transglycosylase associated protein 34 83 1.7E-8 T 11-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 ATC04_12680 4d4ff2aabd28471e2bf1bf3183c85a20 202 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 65 87 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ATC04_12680 4d4ff2aabd28471e2bf1bf3183c85a20 202 Gene3D G3DSA:1.20.120.1760 17 192 8.2E-9 T 11-10-2018 ATC04_12680 4d4ff2aabd28471e2bf1bf3183c85a20 202 PIRSF PIRSF000847 14 202 6.0E-46 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 ATC04_12680 4d4ff2aabd28471e2bf1bf3183c85a20 202 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 17 190 2.9E-35 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 ATC04_12680 4d4ff2aabd28471e2bf1bf3183c85a20 202 Pfam PF01066 CDP-alcohol phosphatidyltransferase 17 87 3.0E-13 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ATC04_01345 7194a63bea764acaf5b237f437cb0232 148 Gene3D G3DSA:3.10.450.50 1 147 7.3E-29 T 11-10-2018 ATC04_01345 7194a63bea764acaf5b237f437cb0232 148 Pfam PF13577 SnoaL-like domain 9 131 1.1E-17 T 11-10-2018 IPR037401 SnoaL-like domain ATC04_01345 7194a63bea764acaf5b237f437cb0232 148 SUPERFAMILY SSF54427 3 137 3.9E-23 T 11-10-2018 IPR032710 NTF2-like domain superfamily ATC04_15855 89107b48cd24c98817161eb8a10ea007 505 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 486 2.2E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_15855 89107b48cd24c98817161eb8a10ea007 505 SMART SM00304 196 258 0.0055 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ATC04_15855 89107b48cd24c98817161eb8a10ea007 505 SUPERFAMILY SSF55874 322 489 1.57E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_15855 89107b48cd24c98817161eb8a10ea007 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 2.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_15855 89107b48cd24c98817161eb8a10ea007 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 485 2.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_15855 89107b48cd24c98817161eb8a10ea007 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 442 2.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_15855 89107b48cd24c98817161eb8a10ea007 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 467 2.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_15855 89107b48cd24c98817161eb8a10ea007 505 Gene3D G3DSA:3.30.565.10 336 493 1.0E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_15855 89107b48cd24c98817161eb8a10ea007 505 SUPERFAMILY SSF47384 252 331 1.63E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ATC04_15855 89107b48cd24c98817161eb8a10ea007 505 SMART SM00388 266 332 3.8E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_15855 89107b48cd24c98817161eb8a10ea007 505 SMART SM00387 375 488 1.6E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_15855 89107b48cd24c98817161eb8a10ea007 505 Gene3D G3DSA:1.10.287.130 200 334 1.0E-23 T 11-10-2018 ATC04_15855 89107b48cd24c98817161eb8a10ea007 505 Pfam PF00512 His Kinase A (phospho-acceptor) domain 267 331 3.1E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_15810 c936c367c2067ae071fc2e3d39ae2288 637 SUPERFAMILY SSF56219 304 633 1.14E-28 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ATC04_15810 c936c367c2067ae071fc2e3d39ae2288 637 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 311 592 3.1E-8 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ATC04_15810 c936c367c2067ae071fc2e3d39ae2288 637 Gene3D G3DSA:3.60.10.10 343 633 4.5E-41 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ATC04_12890 3264a390172e107437eb661c8ca14d78 229 SMART SM00345 17 76 4.5E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_12890 3264a390172e107437eb661c8ca14d78 229 Pfam PF07729 FCD domain 97 217 1.2E-21 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_12890 3264a390172e107437eb661c8ca14d78 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 9.0E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_12890 3264a390172e107437eb661c8ca14d78 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 9.0E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_12890 3264a390172e107437eb661c8ca14d78 229 SUPERFAMILY SSF48008 97 224 1.07E-24 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_12890 3264a390172e107437eb661c8ca14d78 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.8E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_12890 3264a390172e107437eb661c8ca14d78 229 Gene3D G3DSA:1.10.10.10 6 81 6.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_12890 3264a390172e107437eb661c8ca14d78 229 Gene3D G3DSA:1.20.120.530 94 224 3.1E-24 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_12890 3264a390172e107437eb661c8ca14d78 229 SMART SM00895 97 221 4.2E-21 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_12890 3264a390172e107437eb661c8ca14d78 229 SUPERFAMILY SSF46785 6 80 5.55E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_17280 b43c153d576c73114ae41b148ae8925a 465 SMART SM00849 12 192 3.5E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_17280 b43c153d576c73114ae41b148ae8925a 465 Gene3D G3DSA:3.40.250.10 370 464 4.3E-20 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_17280 b43c153d576c73114ae41b148ae8925a 465 Pfam PF00753 Metallo-beta-lactamase superfamily 12 192 8.8E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_17280 b43c153d576c73114ae41b148ae8925a 465 Gene3D G3DSA:3.60.15.10 1 258 8.6E-75 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_17280 b43c153d576c73114ae41b148ae8925a 465 SUPERFAMILY SSF52821 235 352 1.05E-6 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_17280 b43c153d576c73114ae41b148ae8925a 465 SMART SM00450 368 462 2.7E-14 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_17280 b43c153d576c73114ae41b148ae8925a 465 SUPERFAMILY SSF52821 364 459 5.11E-23 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_17280 b43c153d576c73114ae41b148ae8925a 465 SUPERFAMILY SSF56281 10 256 4.48E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_17280 b43c153d576c73114ae41b148ae8925a 465 Pfam PF00581 Rhodanese-like domain 382 458 4.8E-10 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_17280 b43c153d576c73114ae41b148ae8925a 465 Gene3D G3DSA:3.40.250.10 262 362 4.3E-8 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_15285 13a70f5c1082724d78731681575435ef 127 SUPERFAMILY SSF50249 1 65 8.08E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_15285 13a70f5c1082724d78731681575435ef 127 SMART SM00357 3 65 4.4E-17 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ATC04_15285 13a70f5c1082724d78731681575435ef 127 Gene3D G3DSA:2.40.50.140 2 74 1.0E-17 T 11-10-2018 ATC04_15285 13a70f5c1082724d78731681575435ef 127 Pfam PF00313 'Cold-shock' DNA-binding domain 3 62 1.9E-13 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_15285 13a70f5c1082724d78731681575435ef 127 PRINTS PR00050 Cold shock protein signature 24 33 2.3E-9 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_15285 13a70f5c1082724d78731681575435ef 127 PRINTS PR00050 Cold shock protein signature 38 56 2.3E-9 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_15285 13a70f5c1082724d78731681575435ef 127 PRINTS PR00050 Cold shock protein signature 4 19 2.3E-9 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_15315 0597d5f58ffd5f086bc60850f98ab951 298 Pfam PF13223 Protein of unknown function (DUF4031) 3 76 5.5E-25 T 11-10-2018 IPR025109 Domain of unknown function DUF4031 ATC04_15315 0597d5f58ffd5f086bc60850f98ab951 298 Gene3D G3DSA:1.10.3210.10 108 246 3.8E-9 T 11-10-2018 ATC04_15315 0597d5f58ffd5f086bc60850f98ab951 298 SUPERFAMILY SSF109604 110 281 2.75E-22 T 11-10-2018 ATC04_16660 ebaaa42e3a0044378e99c9085485df23 228 Pfam PF13490 Putative zinc-finger 13 38 1.1E-7 T 11-10-2018 IPR027383 Putative zinc-finger ATC04_16660 ebaaa42e3a0044378e99c9085485df23 228 Gene3D G3DSA:1.10.10.1320 4 67 4.1E-24 T 11-10-2018 ATC04_02015 593c7c44a13c07e87127a41cfa250720 391 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 58 318 5.8E-32 T 11-10-2018 IPR017039 Virulence factor BrkB ATC04_02015 593c7c44a13c07e87127a41cfa250720 391 PIRSF PIRSF035875 35 342 5.1E-79 T 11-10-2018 IPR017039 Virulence factor BrkB ATC04_02015 593c7c44a13c07e87127a41cfa250720 391 Pfam PF03631 Virulence factor BrkB 66 323 3.2E-59 T 11-10-2018 IPR017039 Virulence factor BrkB ATC04_12190 5203850fd383dd4e2d739c1e2de70215 257 PIRSF PIRSF017388 4 247 1.1E-52 T 11-10-2018 IPR012354 Esterase/lipase GO:0052689 ATC04_12190 5203850fd383dd4e2d739c1e2de70215 257 SUPERFAMILY SSF53474 13 243 1.11E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_12190 5203850fd383dd4e2d739c1e2de70215 257 Gene3D G3DSA:3.40.50.1820 6 245 2.3E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_12190 5203850fd383dd4e2d739c1e2de70215 257 Pfam PF12146 Serine aminopeptidase, S33 15 220 5.3E-15 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 ATC04_04350 009c3fac9be844233bdbfc2a5e1a475f 229 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 52 3.6E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_04350 009c3fac9be844233bdbfc2a5e1a475f 229 Gene3D G3DSA:1.10.357.10 5 191 1.1E-34 T 11-10-2018 ATC04_04350 009c3fac9be844233bdbfc2a5e1a475f 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 3.5E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_04350 009c3fac9be844233bdbfc2a5e1a475f 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 3.5E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_04350 009c3fac9be844233bdbfc2a5e1a475f 229 SUPERFAMILY SSF46689 7 65 6.31E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_03340 b040d54a08dfe3351bbfa643b6ce48c2 262 Gene3D G3DSA:3.30.450.40 84 257 9.6E-38 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_03340 b040d54a08dfe3351bbfa643b6ce48c2 262 Gene3D G3DSA:1.10.10.10 7 83 6.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03340 b040d54a08dfe3351bbfa643b6ce48c2 262 Pfam PF09339 IclR helix-turn-helix domain 11 57 6.6E-11 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_03340 b040d54a08dfe3351bbfa643b6ce48c2 262 Pfam PF01614 Bacterial transcriptional regulator 133 251 1.7E-15 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ATC04_03340 b040d54a08dfe3351bbfa643b6ce48c2 262 SUPERFAMILY SSF55781 74 253 2.81E-37 T 11-10-2018 ATC04_03340 b040d54a08dfe3351bbfa643b6ce48c2 262 SMART SM00346 8 99 2.0E-17 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_03340 b040d54a08dfe3351bbfa643b6ce48c2 262 SUPERFAMILY SSF46785 9 83 1.46E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_06325 6a81a3e0f087a5a25be535f1862a94c8 325 PIRSF PIRSF000545 10 325 4.3E-140 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ATC04_06325 6a81a3e0f087a5a25be535f1862a94c8 325 Hamap MF_00215 Pantothenate kinase [coaA]. 1 325 167.533 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ATC04_06325 6a81a3e0f087a5a25be535f1862a94c8 325 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 18 324 9.4E-125 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ATC04_06325 6a81a3e0f087a5a25be535f1862a94c8 325 SUPERFAMILY SSF52540 18 324 2.17E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06325 6a81a3e0f087a5a25be535f1862a94c8 325 Gene3D G3DSA:3.40.50.300 9 325 2.5E-91 T 11-10-2018 ATC04_06325 6a81a3e0f087a5a25be535f1862a94c8 325 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 98 256 3.6E-11 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 ATC04_02105 f798052a23befd077b497e9ea438b1bf 410 Pfam PF04960 Glutaminase 22 307 5.0E-110 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 ATC04_02105 f798052a23befd077b497e9ea438b1bf 410 Hamap MF_00313 Glutaminase [glsA]. 5 307 39.162 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 ATC04_02105 f798052a23befd077b497e9ea438b1bf 410 Gene3D G3DSA:3.30.750.24 310 404 1.3E-17 T 11-10-2018 IPR036513 STAS domain superfamily ATC04_02105 f798052a23befd077b497e9ea438b1bf 410 TIGRFAM TIGR03814 Gln_ase: glutaminase A 15 307 2.1E-98 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 ATC04_02105 f798052a23befd077b497e9ea438b1bf 410 SUPERFAMILY SSF56601 4 308 4.51E-103 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ATC04_02105 f798052a23befd077b497e9ea438b1bf 410 Gene3D G3DSA:3.40.710.10 1 308 1.3E-119 T 11-10-2018 ATC04_07940 1c953917bfaa4d6eeb6cf985884ae152 1538 Gene3D G3DSA:3.20.20.70 463 816 1.9E-127 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_07940 1c953917bfaa4d6eeb6cf985884ae152 1538 Gene3D G3DSA:3.20.20.70 817 1247 1.0E-185 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_07940 1c953917bfaa4d6eeb6cf985884ae152 1538 Pfam PF01645 Conserved region in glutamate synthase 831 1195 1.1E-150 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 ATC04_07940 1c953917bfaa4d6eeb6cf985884ae152 1538 Pfam PF00310 Glutamine amidotransferases class-II 42 455 1.5E-171 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain ATC04_07940 1c953917bfaa4d6eeb6cf985884ae152 1538 SUPERFAMILY SSF51395 469 1217 2.49E-254 T 11-10-2018 ATC04_07940 1c953917bfaa4d6eeb6cf985884ae152 1538 Pfam PF01493 GXGXG motif 1277 1443 4.0E-71 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 ATC04_07940 1c953917bfaa4d6eeb6cf985884ae152 1538 Gene3D G3DSA:3.60.20.10 42 462 1.9E-172 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ATC04_07940 1c953917bfaa4d6eeb6cf985884ae152 1538 Gene3D G3DSA:2.160.20.60 1249 1520 1.0E-90 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 ATC04_07940 1c953917bfaa4d6eeb6cf985884ae152 1538 Pfam PF04898 Glutamate synthase central domain 482 767 1.9E-107 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 ATC04_07940 1c953917bfaa4d6eeb6cf985884ae152 1538 SUPERFAMILY SSF56235 42 459 1.16E-143 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ATC04_07940 1c953917bfaa4d6eeb6cf985884ae152 1538 SUPERFAMILY SSF69336 1246 1512 4.05E-81 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 ATC04_03020 62abb8f808651affd0541a4a4150e2f5 374 SUPERFAMILY SSF51905 5 362 1.62E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03020 62abb8f808651affd0541a4a4150e2f5 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 6.7E-21 T 11-10-2018 ATC04_03020 62abb8f808651affd0541a4a4150e2f5 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 6.7E-21 T 11-10-2018 ATC04_03020 62abb8f808651affd0541a4a4150e2f5 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 299 6.7E-21 T 11-10-2018 ATC04_03020 62abb8f808651affd0541a4a4150e2f5 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 268 283 6.7E-21 T 11-10-2018 ATC04_03020 62abb8f808651affd0541a4a4150e2f5 374 Gene3D G3DSA:3.50.50.60 5 326 1.1E-67 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03020 62abb8f808651affd0541a4a4150e2f5 374 Pfam PF01494 FAD binding domain 5 305 3.7E-37 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 ATC04_03020 62abb8f808651affd0541a4a4150e2f5 374 Gene3D G3DSA:3.30.70.2450 180 257 1.1E-67 T 11-10-2018 ATC04_01305 dbdea06132978443718af43c946261b6 419 SUPERFAMILY SSF51395 9 385 1.67E-92 T 11-10-2018 ATC04_01305 dbdea06132978443718af43c946261b6 419 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 245 1.1E-46 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ATC04_01305 dbdea06132978443718af43c946261b6 419 Gene3D G3DSA:3.20.20.70 7 398 1.7E-96 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_13375 6bdedfd76e8e776431800dd6e2be28fd 395 Pfam PF00534 Glycosyl transferases group 1 208 367 4.1E-35 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ATC04_13375 6bdedfd76e8e776431800dd6e2be28fd 395 SUPERFAMILY SSF53756 11 388 4.0E-72 T 11-10-2018 ATC04_13375 6bdedfd76e8e776431800dd6e2be28fd 395 Gene3D G3DSA:3.40.50.2000 22 380 1.7E-71 T 11-10-2018 ATC04_13375 6bdedfd76e8e776431800dd6e2be28fd 395 Gene3D G3DSA:3.40.50.2000 196 375 1.7E-71 T 11-10-2018 ATC04_13375 6bdedfd76e8e776431800dd6e2be28fd 395 Pfam PF13439 Glycosyltransferase Family 4 22 197 4.4E-21 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ATC04_00820 301ec1dc6dbed9d895dd03bc415ffbba 98 Pfam PF01250 Ribosomal protein S6 4 92 2.8E-27 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00820 301ec1dc6dbed9d895dd03bc415ffbba 98 Gene3D G3DSA:3.30.70.60 1 98 1.2E-30 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ATC04_00820 301ec1dc6dbed9d895dd03bc415ffbba 98 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.691 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 ATC04_00820 301ec1dc6dbed9d895dd03bc415ffbba 98 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 1.1E-24 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00820 301ec1dc6dbed9d895dd03bc415ffbba 98 SUPERFAMILY SSF54995 1 95 2.09E-32 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_08930 d5764874ac42ec738fd1bd849577b1b6 209 Pfam PF00753 Metallo-beta-lactamase superfamily 24 188 1.2E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_08930 d5764874ac42ec738fd1bd849577b1b6 209 SMART SM00849 24 188 1.7E-36 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_08930 d5764874ac42ec738fd1bd849577b1b6 209 Gene3D G3DSA:3.60.15.10 20 206 3.3E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_08930 d5764874ac42ec738fd1bd849577b1b6 209 SUPERFAMILY SSF56281 10 201 9.3E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_00570 d5f1c2cc90dba659ef2fb9fa82e439b1 294 Gene3D G3DSA:1.10.10.10 1 84 1.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_00570 d5f1c2cc90dba659ef2fb9fa82e439b1 294 SUPERFAMILY SSF46785 3 109 5.87E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_00570 d5f1c2cc90dba659ef2fb9fa82e439b1 294 Pfam PF03466 LysR substrate binding domain 89 246 1.9E-10 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_00570 d5f1c2cc90dba659ef2fb9fa82e439b1 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 3.2E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_00570 d5f1c2cc90dba659ef2fb9fa82e439b1 294 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 3 287 6.3E-85 T 11-10-2018 IPR017685 HTH-type transcriptional regulator ArgP ATC04_00570 d5f1c2cc90dba659ef2fb9fa82e439b1 294 SUPERFAMILY SSF53850 90 288 2.35E-16 T 11-10-2018 ATC04_00570 d5f1c2cc90dba659ef2fb9fa82e439b1 294 Gene3D G3DSA:3.40.190.290 86 288 3.8E-59 T 11-10-2018 ATC04_10790 3d42c7098f44199371a21ede056fb89a 149 Gene3D G3DSA:3.30.420.10 1 147 1.3E-14 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_10790 3d42c7098f44199371a21ede056fb89a 149 SUPERFAMILY SSF53098 2 122 1.13E-15 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_10790 3d42c7098f44199371a21ede056fb89a 149 Pfam PF00665 Integrase core domain 3 117 4.4E-14 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_16380 5c9b5c2392757dba4ef9a7d5c7265027 187 SUPERFAMILY SSF53254 1 181 6.92E-47 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_16380 5c9b5c2392757dba4ef9a7d5c7265027 187 PIRSF PIRSF000709 3 71 0.0014 T 11-10-2018 ATC04_16380 5c9b5c2392757dba4ef9a7d5c7265027 187 PIRSF PIRSF000709 110 165 9.6 T 11-10-2018 ATC04_16380 5c9b5c2392757dba4ef9a7d5c7265027 187 Gene3D G3DSA:3.40.50.1240 1 185 4.4E-43 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_16380 5c9b5c2392757dba4ef9a7d5c7265027 187 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 181 2.3E-42 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_16380 5c9b5c2392757dba4ef9a7d5c7265027 187 SMART SM00855 2 146 1.9E-22 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_15980 a81eb27f417028d7260eac854500f686 388 Pfam PF00581 Rhodanese-like domain 282 373 9.2E-7 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_15980 a81eb27f417028d7260eac854500f686 388 SUPERFAMILY SSF69572 12 351 5.23E-78 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ATC04_15980 a81eb27f417028d7260eac854500f686 388 Pfam PF00899 ThiF family 25 255 1.7E-50 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ATC04_15980 a81eb27f417028d7260eac854500f686 388 Gene3D G3DSA:3.40.250.10 270 380 2.4E-16 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_15980 a81eb27f417028d7260eac854500f686 388 Gene3D G3DSA:3.40.50.720 16 262 2.9E-71 T 11-10-2018 ATC04_15980 a81eb27f417028d7260eac854500f686 388 SMART SM00450 281 379 6.0E-14 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_00940 35dd6ff6d10a7980a819bd1e64434d6f 432 Gene3D G3DSA:1.20.1250.20 240 426 5.3E-20 T 11-10-2018 ATC04_00940 35dd6ff6d10a7980a819bd1e64434d6f 432 PRINTS PR01036 Tetracycline resistance protein TetB signature 120 144 8.8E-5 T 11-10-2018 ATC04_00940 35dd6ff6d10a7980a819bd1e64434d6f 432 PRINTS PR01036 Tetracycline resistance protein TetB signature 90 110 8.8E-5 T 11-10-2018 ATC04_00940 35dd6ff6d10a7980a819bd1e64434d6f 432 Pfam PF07690 Major Facilitator Superfamily 1 244 2.6E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_00940 35dd6ff6d10a7980a819bd1e64434d6f 432 Pfam PF07690 Major Facilitator Superfamily 252 426 4.8E-12 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_00940 35dd6ff6d10a7980a819bd1e64434d6f 432 SUPERFAMILY SSF103473 1 428 2.75E-47 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_00940 35dd6ff6d10a7980a819bd1e64434d6f 432 Gene3D G3DSA:1.20.1720.10 1 239 1.3E-26 T 11-10-2018 ATC04_04710 d5dfae794404f2f14771cc3510c67e03 263 Gene3D G3DSA:1.10.3720.10 5 260 1.0E-54 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_04710 d5dfae794404f2f14771cc3510c67e03 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 253 3.8E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_04710 d5dfae794404f2f14771cc3510c67e03 263 SUPERFAMILY SSF161098 3 251 2.09E-55 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_01380 8d0eeefb3dd5bbd56dc94d5d2399b9e9 403 Pfam PF13458 Periplasmic binding protein 52 382 6.3E-42 T 11-10-2018 IPR028081 Leucine-binding protein domain ATC04_01380 8d0eeefb3dd5bbd56dc94d5d2399b9e9 403 SUPERFAMILY SSF53822 52 380 1.28E-47 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ATC04_01380 8d0eeefb3dd5bbd56dc94d5d2399b9e9 403 Gene3D G3DSA:3.40.50.2300 162 299 2.3E-49 T 11-10-2018 ATC04_01380 8d0eeefb3dd5bbd56dc94d5d2399b9e9 403 Gene3D G3DSA:3.40.50.2300 52 360 2.3E-49 T 11-10-2018 ATC04_01085 5003c13fb82b6674fdb5a01ffb04afee 538 Pfam PF07969 Amidohydrolase family 50 529 2.1E-61 T 11-10-2018 IPR013108 Amidohydrolase 3 ATC04_01085 5003c13fb82b6674fdb5a01ffb04afee 538 Gene3D G3DSA:3.20.20.140 62 489 7.4E-88 T 11-10-2018 ATC04_01085 5003c13fb82b6674fdb5a01ffb04afee 538 Gene3D G3DSA:2.30.40.10 14 507 7.4E-88 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_01085 5003c13fb82b6674fdb5a01ffb04afee 538 SUPERFAMILY SSF51556 61 483 1.85E-31 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_01085 5003c13fb82b6674fdb5a01ffb04afee 538 Gene3D G3DSA:3.10.310.70 80 199 7.4E-88 T 11-10-2018 ATC04_01085 5003c13fb82b6674fdb5a01ffb04afee 538 SUPERFAMILY SSF51338 4 529 1.19E-9 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_14140 0027e4aa890775e69190b6d30112c119 441 Pfam PF01882 Protein of unknown function DUF58 212 304 2.6E-18 T 11-10-2018 IPR002881 Domain of unknown function DUF58 ATC04_07840 ed18eb391d38f397fa9a5b99050c6962 310 SUPERFAMILY SSF53328 1 197 1.7E-47 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATC04_07840 ed18eb391d38f397fa9a5b99050c6962 310 Gene3D G3DSA:3.40.50.170 1 203 2.9E-58 T 11-10-2018 ATC04_07840 ed18eb391d38f397fa9a5b99050c6962 310 Pfam PF00551 Formyl transferase 3 178 8.0E-26 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATC04_07840 ed18eb391d38f397fa9a5b99050c6962 310 SUPERFAMILY SSF50486 202 300 5.3E-21 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 ATC04_07840 ed18eb391d38f397fa9a5b99050c6962 310 Gene3D G3DSA:3.10.25.10 204 307 1.7E-16 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATC04_07840 ed18eb391d38f397fa9a5b99050c6962 310 Pfam PF02911 Formyl transferase, C-terminal domain 201 300 5.4E-18 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATC04_07840 ed18eb391d38f397fa9a5b99050c6962 310 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 306 3.2E-61 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 ATC04_07840 ed18eb391d38f397fa9a5b99050c6962 310 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 28.981 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 ATC04_14995 81ea480b75761be424fc24fc247f36ba 287 Pfam PF03301 Tryptophan 2,3-dioxygenase 19 199 1.7E-41 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 ATC04_14995 81ea480b75761be424fc24fc247f36ba 287 Pfam PF03301 Tryptophan 2,3-dioxygenase 212 283 1.3E-21 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 ATC04_14995 81ea480b75761be424fc24fc247f36ba 287 SUPERFAMILY SSF140959 26 285 3.4E-98 T 11-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 ATC04_14995 81ea480b75761be424fc24fc247f36ba 287 Gene3D G3DSA:1.20.58.480 24 287 4.3E-95 T 11-10-2018 ATC04_14995 81ea480b75761be424fc24fc247f36ba 287 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 20 285 1.0E-121 T 11-10-2018 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11 ATC04_14995 81ea480b75761be424fc24fc247f36ba 287 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 21 285 38.783 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 ATC04_12200 ecbf067345d154f3506039207ef86757 603 Pfam PF00501 AMP-binding enzyme 32 466 4.7E-95 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_12200 ecbf067345d154f3506039207ef86757 603 SUPERFAMILY SSF56801 17 597 6.67E-111 T 11-10-2018 ATC04_12200 ecbf067345d154f3506039207ef86757 603 Gene3D G3DSA:3.40.50.12780 322 464 6.5E-38 T 11-10-2018 ATC04_12200 ecbf067345d154f3506039207ef86757 603 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_12200 ecbf067345d154f3506039207ef86757 603 Gene3D G3DSA:3.40.50.12780 5 306 8.3E-52 T 11-10-2018 ATC04_03010 715637d33b219a0d1ffee5b222e437c1 375 Gene3D G3DSA:3.40.47.10 2 221 1.0E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_03010 715637d33b219a0d1ffee5b222e437c1 375 SUPERFAMILY SSF53901 1 221 1.03E-48 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_03010 715637d33b219a0d1ffee5b222e437c1 375 SUPERFAMILY SSF53901 223 366 3.8E-35 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_03010 715637d33b219a0d1ffee5b222e437c1 375 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 230 365 3.0E-26 T 11-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal ATC04_03010 715637d33b219a0d1ffee5b222e437c1 375 Gene3D G3DSA:3.40.47.10 223 372 6.3E-47 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_03010 715637d33b219a0d1ffee5b222e437c1 375 PIRSF PIRSF000451 1 371 6.6E-111 T 11-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 ATC04_03010 715637d33b219a0d1ffee5b222e437c1 375 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 4 217 1.7E-26 T 11-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal ATC04_14165 68b71b54ef1898fa0faa1e02e983be73 613 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_14165 68b71b54ef1898fa0faa1e02e983be73 613 Gene3D G3DSA:3.40.50.12780 10 307 3.1E-43 T 11-10-2018 ATC04_14165 68b71b54ef1898fa0faa1e02e983be73 613 Pfam PF00501 AMP-binding enzyme 25 482 5.3E-88 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_14165 68b71b54ef1898fa0faa1e02e983be73 613 Gene3D G3DSA:3.40.50.12780 344 480 6.9E-37 T 11-10-2018 ATC04_14165 68b71b54ef1898fa0faa1e02e983be73 613 SUPERFAMILY SSF56801 18 612 9.68E-104 T 11-10-2018 ATC04_05600 7601d84c4393ddc7675f63b71ebba86d 454 Gene3D G3DSA:3.10.580.10 329 453 1.0E-9 T 11-10-2018 ATC04_05600 7601d84c4393ddc7675f63b71ebba86d 454 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 299 9.5E-65 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ATC04_05600 7601d84c4393ddc7675f63b71ebba86d 454 TIGRFAM TIGR01137 cysta_beta: cystathionine beta-synthase 5 452 2.1E-155 T 11-10-2018 IPR005857 Cystathionine beta-synthase GO:0004122|GO:0005737|GO:0019343 KEGG: 00260+4.2.1.22|KEGG: 00270+4.2.1.22|MetaCyc: PWY-801 ATC04_05600 7601d84c4393ddc7675f63b71ebba86d 454 SUPERFAMILY SSF54631 335 452 1.89E-10 T 11-10-2018 ATC04_05600 7601d84c4393ddc7675f63b71ebba86d 454 Gene3D G3DSA:3.40.50.1100 9 307 5.6E-116 T 11-10-2018 ATC04_05600 7601d84c4393ddc7675f63b71ebba86d 454 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ATC04_05600 7601d84c4393ddc7675f63b71ebba86d 454 SUPERFAMILY SSF53686 1 320 1.96E-92 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATC04_05600 7601d84c4393ddc7675f63b71ebba86d 454 Gene3D G3DSA:3.40.50.1100 41 154 5.6E-116 T 11-10-2018 ATC04_17915 766168ecaf7c928571f7a07241fef3d8 82 Gene3D G3DSA:1.10.1220.170 39 82 2.1E-12 T 11-10-2018 ATC04_17915 766168ecaf7c928571f7a07241fef3d8 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 53 7.1E-11 T 11-10-2018 ATC04_17915 766168ecaf7c928571f7a07241fef3d8 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 2 68 1.6E-11 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM ATC04_17915 766168ecaf7c928571f7a07241fef3d8 82 SUPERFAMILY SSF143120 3 79 7.85E-17 T 11-10-2018 IPR036165 YefM-like superfamily ATC04_17915 766168ecaf7c928571f7a07241fef3d8 82 Gene3D G3DSA:3.40.1620.10 1 38 7.5E-20 T 11-10-2018 ATC04_06660 af138fe28c4abe5aaa6da138a48207b2 116 Gene3D G3DSA:1.10.10.10 18 115 4.1E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_06660 af138fe28c4abe5aaa6da138a48207b2 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 86 101 1.7E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_06660 af138fe28c4abe5aaa6da138a48207b2 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 51 1.7E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_06660 af138fe28c4abe5aaa6da138a48207b2 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 1.7E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_06660 af138fe28c4abe5aaa6da138a48207b2 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 69 1.7E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_06660 af138fe28c4abe5aaa6da138a48207b2 116 Pfam PF01022 Bacterial regulatory protein, arsR family 41 88 3.4E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_06660 af138fe28c4abe5aaa6da138a48207b2 116 SUPERFAMILY SSF46785 26 114 4.4E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_06660 af138fe28c4abe5aaa6da138a48207b2 116 SMART SM00418 34 115 3.1E-24 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_09175 0f85288792008af8ab064ebdab0111c7 108 Gene3D G3DSA:1.10.10.10 5 107 5.9E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_09175 0f85288792008af8ab064ebdab0111c7 108 SUPERFAMILY SSF46785 17 102 7.98E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_09175 0f85288792008af8ab064ebdab0111c7 108 Pfam PF03551 Transcriptional regulator PadR-like family 20 91 4.1E-20 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal ATC04_13265 3575f1599a95cae02bdc161b32171eec 548 SUPERFAMILY SSF53850 45 545 3.39E-96 T 11-10-2018 ATC04_13265 3575f1599a95cae02bdc161b32171eec 548 Gene3D G3DSA:3.40.190.10 57 533 3.8E-106 T 11-10-2018 ATC04_13265 3575f1599a95cae02bdc161b32171eec 548 Gene3D G3DSA:3.10.105.10 298 521 3.8E-106 T 11-10-2018 ATC04_13265 3575f1599a95cae02bdc161b32171eec 548 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 469 1.9E-54 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ATC04_13265 3575f1599a95cae02bdc161b32171eec 548 Gene3D G3DSA:3.90.76.10 76 198 3.8E-106 T 11-10-2018 ATC04_13265 3575f1599a95cae02bdc161b32171eec 548 PIRSF PIRSF002741 3 535 3.9E-66 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ATC04_07225 a930233ecc4359b21c18a62e8d1aee04 232 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 99 8.4E-18 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 ATC04_07225 a930233ecc4359b21c18a62e8d1aee04 232 SUPERFAMILY SSF69754 1 108 4.58E-21 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like ATC04_07225 a930233ecc4359b21c18a62e8d1aee04 232 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 103 1.0E-22 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 ATC04_07225 a930233ecc4359b21c18a62e8d1aee04 232 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 149 203 5.6E-20 T 11-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal ATC04_07225 a930233ecc4359b21c18a62e8d1aee04 232 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 207 20.032 T 11-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid ATC04_07225 a930233ecc4359b21c18a62e8d1aee04 232 Gene3D G3DSA:3.30.160.100 3 104 3.3E-20 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like ATC04_07225 a930233ecc4359b21c18a62e8d1aee04 232 Gene3D G3DSA:3.30.505.50 161 206 3.6E-15 T 11-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily ATC04_14770 15dbe745a1ca44fd9eb27ab73be68f84 291 SUPERFAMILY SSF110296 48 288 1.07E-29 T 11-10-2018 ATC04_14770 15dbe745a1ca44fd9eb27ab73be68f84 291 Gene3D G3DSA:2.130.10.10 92 214 2.3E-10 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ATC04_14770 15dbe745a1ca44fd9eb27ab73be68f84 291 Gene3D G3DSA:2.130.10.10 215 291 1.4E-7 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ATC04_18300 d0852837b647f0a0e80d325c3944b4f1 86 Pfam PF12728 Helix-turn-helix domain 25 68 1.1E-10 T 11-10-2018 ATC04_18300 d0852837b647f0a0e80d325c3944b4f1 86 Gene3D G3DSA:1.10.1660.10 20 72 2.1E-7 T 11-10-2018 ATC04_18300 d0852837b647f0a0e80d325c3944b4f1 86 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 27 68 1.5E-9 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 ATC04_18540 d0852837b647f0a0e80d325c3944b4f1 86 Pfam PF12728 Helix-turn-helix domain 25 68 1.1E-10 T 11-10-2018 ATC04_18540 d0852837b647f0a0e80d325c3944b4f1 86 Gene3D G3DSA:1.10.1660.10 20 72 2.1E-7 T 11-10-2018 ATC04_18540 d0852837b647f0a0e80d325c3944b4f1 86 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 27 68 1.5E-9 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 ATC04_14225 ed7e65568d3c9c1571452bbe8160dcae 540 Gene3D G3DSA:1.10.260.150 167 484 2.6E-58 T 11-10-2018 ATC04_14225 ed7e65568d3c9c1571452bbe8160dcae 540 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 190 369 4.0E-22 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ATC04_14225 ed7e65568d3c9c1571452bbe8160dcae 540 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 190 369 1.2E-24 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ATC04_01930 42f3e5c80a2dfdf211c03d9f7bb4be9e 344 SUPERFAMILY SSF81345 23 340 2.75E-51 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_01930 42f3e5c80a2dfdf211c03d9f7bb4be9e 344 Gene3D G3DSA:1.10.3470.10 23 343 1.4E-49 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_01930 42f3e5c80a2dfdf211c03d9f7bb4be9e 344 Pfam PF01032 FecCD transport family 33 340 6.3E-47 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ATC04_00580 86f2b2a01334786751aaaf28cba84bc0 233 SUPERFAMILY SSF144091 23 199 2.49E-40 T 11-10-2018 ATC04_00580 86f2b2a01334786751aaaf28cba84bc0 233 Gene3D G3DSA:1.20.1540.10 19 205 3.0E-36 T 11-10-2018 IPR035952 Rhomboid-like superfamily ATC04_00580 86f2b2a01334786751aaaf28cba84bc0 233 Pfam PF01694 Rhomboid family 60 192 1.3E-30 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ATC04_03660 8738064523d0a1787bff32e308349f6a 235 Gene3D G3DSA:1.10.10.10 6 80 4.3E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03660 8738064523d0a1787bff32e308349f6a 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03660 8738064523d0a1787bff32e308349f6a 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03660 8738064523d0a1787bff32e308349f6a 235 Pfam PF07729 FCD domain 101 228 1.8E-12 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_03660 8738064523d0a1787bff32e308349f6a 235 Gene3D G3DSA:1.20.120.530 82 235 2.8E-24 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_03660 8738064523d0a1787bff32e308349f6a 235 SUPERFAMILY SSF48008 99 233 9.15E-17 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_03660 8738064523d0a1787bff32e308349f6a 235 SUPERFAMILY SSF46785 4 69 4.25E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03660 8738064523d0a1787bff32e308349f6a 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 69 1.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03660 8738064523d0a1787bff32e308349f6a 235 SMART SM00345 13 76 1.1E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03660 8738064523d0a1787bff32e308349f6a 235 SMART SM00895 101 229 4.9E-8 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_13275 58e90af7aa9956738649771868a7864b 333 Pfam PF02779 Transketolase, pyrimidine binding domain 4 177 6.8E-45 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ATC04_13275 58e90af7aa9956738649771868a7864b 333 SUPERFAMILY SSF52518 4 181 1.67E-66 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_13275 58e90af7aa9956738649771868a7864b 333 SUPERFAMILY SSF52922 194 322 2.09E-37 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ATC04_13275 58e90af7aa9956738649771868a7864b 333 Gene3D G3DSA:3.40.50.920 196 324 1.1E-45 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ATC04_13275 58e90af7aa9956738649771868a7864b 333 Gene3D G3DSA:3.40.50.970 1 195 4.6E-77 T 11-10-2018 ATC04_13275 58e90af7aa9956738649771868a7864b 333 SMART SM00861 3 178 2.9E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ATC04_13275 58e90af7aa9956738649771868a7864b 333 Pfam PF02780 Transketolase, C-terminal domain 194 314 6.9E-38 T 11-10-2018 IPR033248 Transketolase, C-terminal domain ATC04_01375 93b63523f140893fdef7d18c01533730 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 254 5.0E-46 T 11-10-2018 ATC04_01375 93b63523f140893fdef7d18c01533730 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 7.1E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01375 93b63523f140893fdef7d18c01533730 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 7.1E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01375 93b63523f140893fdef7d18c01533730 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 7.1E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01375 93b63523f140893fdef7d18c01533730 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 7.1E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01375 93b63523f140893fdef7d18c01533730 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 7.1E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01375 93b63523f140893fdef7d18c01533730 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 7.1E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01375 93b63523f140893fdef7d18c01533730 255 SUPERFAMILY SSF51735 16 255 1.11E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01375 93b63523f140893fdef7d18c01533730 255 Gene3D G3DSA:3.40.50.720 10 255 9.8E-52 T 11-10-2018 ATC04_13770 94f4d166447c219419024999a8c15981 119 Gene3D G3DSA:3.40.630.30 8 117 5.4E-6 T 11-10-2018 ATC04_13250 fb2fbe42db61f408e55d6dddcce31dc0 547 SUPERFAMILY SSF52540 289 537 1.51E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13250 fb2fbe42db61f408e55d6dddcce31dc0 547 SMART SM00382 39 237 2.4E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_13250 fb2fbe42db61f408e55d6dddcce31dc0 547 SMART SM00382 323 515 2.5E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_13250 fb2fbe42db61f408e55d6dddcce31dc0 547 Pfam PF00005 ABC transporter 31 188 1.9E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_13250 fb2fbe42db61f408e55d6dddcce31dc0 547 SUPERFAMILY SSF52540 10 259 2.72E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13250 fb2fbe42db61f408e55d6dddcce31dc0 547 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_13250 fb2fbe42db61f408e55d6dddcce31dc0 547 Gene3D G3DSA:3.40.50.300 8 287 1.4E-83 T 11-10-2018 ATC04_13250 fb2fbe42db61f408e55d6dddcce31dc0 547 Gene3D G3DSA:3.40.50.300 288 545 8.6E-85 T 11-10-2018 ATC04_13250 fb2fbe42db61f408e55d6dddcce31dc0 547 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 273 4.8E-8 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_13250 fb2fbe42db61f408e55d6dddcce31dc0 547 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 517 542 0.0057 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_13250 fb2fbe42db61f408e55d6dddcce31dc0 547 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_13250 fb2fbe42db61f408e55d6dddcce31dc0 547 Pfam PF00005 ABC transporter 314 465 5.3E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_12675 cad048736d411e12a730bb912d05ad96 160 SUPERFAMILY SSF142433 4 154 1.96E-46 T 11-10-2018 IPR036653 CinA-like, C-terminal ATC04_12675 cad048736d411e12a730bb912d05ad96 160 Gene3D G3DSA:3.90.950.20 1 154 2.6E-55 T 11-10-2018 IPR036653 CinA-like, C-terminal ATC04_12675 cad048736d411e12a730bb912d05ad96 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 152 1.6E-37 T 11-10-2018 IPR008136 CinA, C-terminal ATC04_12675 cad048736d411e12a730bb912d05ad96 160 Pfam PF02464 Competence-damaged protein 7 152 4.4E-50 T 11-10-2018 IPR008136 CinA, C-terminal ATC04_14115 f0bf7baaa22c3539b940797ee2fbec5c 310 Pfam PF00288 GHMP kinases N terminal domain 98 155 2.1E-10 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 ATC04_14115 f0bf7baaa22c3539b940797ee2fbec5c 310 Gene3D G3DSA:3.30.70.890 171 309 1.8E-31 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ATC04_14115 f0bf7baaa22c3539b940797ee2fbec5c 310 Gene3D G3DSA:3.30.230.10 1 170 4.5E-55 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATC04_14115 f0bf7baaa22c3539b940797ee2fbec5c 310 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 293 30.066 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ATC04_14115 f0bf7baaa22c3539b940797ee2fbec5c 310 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 285 1.4E-54 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ATC04_14115 f0bf7baaa22c3539b940797ee2fbec5c 310 Pfam PF08544 GHMP kinases C terminal 215 289 9.6E-9 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain ATC04_14115 f0bf7baaa22c3539b940797ee2fbec5c 310 PIRSF PIRSF010376 4 307 5.2E-73 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ATC04_14115 f0bf7baaa22c3539b940797ee2fbec5c 310 SUPERFAMILY SSF54211 5 168 5.46E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_14115 f0bf7baaa22c3539b940797ee2fbec5c 310 SUPERFAMILY SSF55060 176 288 1.06E-19 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ATC04_05150 3aff627ca685333a4669e9b66b65c22a 413 SUPERFAMILY SSF52540 63 347 4.32E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_05150 3aff627ca685333a4669e9b66b65c22a 413 TIGRFAM TIGR03819 heli_sec_ATPase: helicase/secretion neighborhood ATPase 24 352 1.7E-119 T 11-10-2018 IPR022399 Helicase/secretion neighbourhood ATPase ATC04_05150 3aff627ca685333a4669e9b66b65c22a 413 Pfam PF00437 Type II/IV secretion system protein 75 344 3.1E-56 T 11-10-2018 IPR001482 Type II/IV secretion system protein ATC04_05150 3aff627ca685333a4669e9b66b65c22a 413 Gene3D G3DSA:3.40.50.300 163 356 1.8E-51 T 11-10-2018 ATC04_05150 3aff627ca685333a4669e9b66b65c22a 413 Gene3D G3DSA:3.30.450.380 16 162 1.7E-14 T 11-10-2018 ATC04_08890 8aa040824e291fe3d8765efebb66a03a 252 Gene3D G3DSA:3.50.50.60 56 168 2.0E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_08890 8aa040824e291fe3d8765efebb66a03a 252 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 42 60 9.6E-9 T 11-10-2018 ATC04_08890 8aa040824e291fe3d8765efebb66a03a 252 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 192 214 9.6E-9 T 11-10-2018 ATC04_08890 8aa040824e291fe3d8765efebb66a03a 252 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 84 102 9.6E-9 T 11-10-2018 ATC04_08890 8aa040824e291fe3d8765efebb66a03a 252 SUPERFAMILY SSF51905 26 236 2.85E-24 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_08890 8aa040824e291fe3d8765efebb66a03a 252 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 65 77 8.9E-9 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_08890 8aa040824e291fe3d8765efebb66a03a 252 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 202 220 8.9E-9 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_08890 8aa040824e291fe3d8765efebb66a03a 252 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 80 104 8.9E-9 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_08890 8aa040824e291fe3d8765efebb66a03a 252 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 43 51 8.9E-9 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_08890 8aa040824e291fe3d8765efebb66a03a 252 Gene3D G3DSA:3.50.50.60 2 233 2.0E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_08890 8aa040824e291fe3d8765efebb66a03a 252 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 35 224 2.7E-18 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_02170 dd36f66ccb49f15ec57238fab7bdc996 305 Pfam PF00296 Luciferase-like monooxygenase 114 276 1.8E-11 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ATC04_02170 dd36f66ccb49f15ec57238fab7bdc996 305 Pfam PF00296 Luciferase-like monooxygenase 14 109 4.8E-15 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ATC04_02170 dd36f66ccb49f15ec57238fab7bdc996 305 Gene3D G3DSA:3.20.20.30 1 303 1.2E-67 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_02170 dd36f66ccb49f15ec57238fab7bdc996 305 SUPERFAMILY SSF51679 1 302 5.63E-54 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_15250 03968192e4b3e98171c1b6f1d1401287 136 SUPERFAMILY SSF55811 5 123 1.62E-23 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_15250 03968192e4b3e98171c1b6f1d1401287 136 Pfam PF00293 NUDIX domain 9 119 9.5E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_15250 03968192e4b3e98171c1b6f1d1401287 136 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATC04_15250 03968192e4b3e98171c1b6f1d1401287 136 Gene3D G3DSA:3.90.79.10 1 134 7.0E-24 T 11-10-2018 ATC04_05225 e8b7fd4ccd8fa862ae90736b13138d15 280 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 231 253 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ATC04_05225 e8b7fd4ccd8fa862ae90736b13138d15 280 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 8 275 24.545 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ATC04_05225 e8b7fd4ccd8fa862ae90736b13138d15 280 Gene3D G3DSA:1.10.3730.10 172 279 1.7E-34 T 11-10-2018 ATC04_05225 e8b7fd4ccd8fa862ae90736b13138d15 280 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 171 275 5.9E-30 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ATC04_05225 e8b7fd4ccd8fa862ae90736b13138d15 280 PIRSF PIRSF000193 8 278 1.8E-67 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ATC04_05225 e8b7fd4ccd8fa862ae90736b13138d15 280 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 9 107 2.0E-15 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ATC04_05225 e8b7fd4ccd8fa862ae90736b13138d15 280 SUPERFAMILY SSF48179 170 278 8.67E-30 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_05225 e8b7fd4ccd8fa862ae90736b13138d15 280 Gene3D G3DSA:3.40.50.720 6 171 3.7E-43 T 11-10-2018 ATC04_05225 e8b7fd4ccd8fa862ae90736b13138d15 280 SUPERFAMILY SSF51735 9 169 5.73E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_05225 e8b7fd4ccd8fa862ae90736b13138d15 280 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 10 275 4.6E-68 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ATC04_15895 1e0610b1e95e3de7d78ba4f34ef4405e 409 Gene3D G3DSA:1.20.1250.20 14 199 1.2E-35 T 11-10-2018 ATC04_15895 1e0610b1e95e3de7d78ba4f34ef4405e 409 SUPERFAMILY SSF103473 9 402 8.37E-56 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_15895 1e0610b1e95e3de7d78ba4f34ef4405e 409 Pfam PF07690 Major Facilitator Superfamily 28 363 9.8E-37 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_15895 1e0610b1e95e3de7d78ba4f34ef4405e 409 Gene3D G3DSA:1.20.1250.20 207 408 2.2E-39 T 11-10-2018 ATC04_08945 6f4291c925c7f5ba074699b5b3be7fe5 451 ProSitePatterns PS00217 Sugar transport proteins signature 2. 140 165 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_08945 6f4291c925c7f5ba074699b5b3be7fe5 451 SUPERFAMILY SSF103473 18 443 1.05E-58 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_08945 6f4291c925c7f5ba074699b5b3be7fe5 451 Gene3D G3DSA:1.20.1250.20 27 450 8.8E-64 T 11-10-2018 ATC04_08945 6f4291c925c7f5ba074699b5b3be7fe5 451 Pfam PF00083 Sugar (and other) transporter 30 226 1.6E-19 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_08945 6f4291c925c7f5ba074699b5b3be7fe5 451 Pfam PF00083 Sugar (and other) transporter 255 430 4.5E-10 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_08945 6f4291c925c7f5ba074699b5b3be7fe5 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 310 326 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_08525 cf666f61663997f4fe9a971b9a146c2e 361 Gene3D G3DSA:3.40.190.10 61 162 3.8E-12 T 11-10-2018 ATC04_08525 cf666f61663997f4fe9a971b9a146c2e 361 SUPERFAMILY SSF53850 64 284 1.29E-35 T 11-10-2018 ATC04_08525 cf666f61663997f4fe9a971b9a146c2e 361 Gene3D G3DSA:3.40.190.10 173 358 4.8E-24 T 11-10-2018 ATC04_08525 cf666f61663997f4fe9a971b9a146c2e 361 SMART SM00062 64 314 0.0064 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ATC04_08525 cf666f61663997f4fe9a971b9a146c2e 361 Pfam PF13379 NMT1-like family 60 287 6.1E-32 T 11-10-2018 ATC04_10495 efe9e4360eb94ef776e6e8269c5c4b5e 216 Gene3D G3DSA:3.10.300.10 1 213 4.4E-62 T 11-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ATC04_10495 efe9e4360eb94ef776e6e8269c5c4b5e 216 SUPERFAMILY SSF50486 1 210 1.73E-53 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 ATC04_10495 efe9e4360eb94ef776e6e8269c5c4b5e 216 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 3 205 30.008 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ATC04_10495 efe9e4360eb94ef776e6e8269c5c4b5e 216 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 1 205 3.1E-48 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ATC04_10495 efe9e4360eb94ef776e6e8269c5c4b5e 216 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 4 202 2.8E-58 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ATC04_01075 63c3c1146be986255ef1ea17a73d1de5 319 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 315 1.7E-97 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 ATC04_01075 63c3c1146be986255ef1ea17a73d1de5 319 Gene3D G3DSA:3.90.25.10 173 303 1.1E-101 T 11-10-2018 ATC04_01075 63c3c1146be986255ef1ea17a73d1de5 319 SUPERFAMILY SSF51735 1 315 1.81E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01075 63c3c1146be986255ef1ea17a73d1de5 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 249 1.4E-50 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ATC04_01075 63c3c1146be986255ef1ea17a73d1de5 319 Gene3D G3DSA:3.40.50.720 4 249 1.1E-101 T 11-10-2018 ATC04_14725 f40ce738caf9ca9c726e2fc116ba2daa 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 8.0E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_14725 f40ce738caf9ca9c726e2fc116ba2daa 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 8.0E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_14725 f40ce738caf9ca9c726e2fc116ba2daa 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 8.0E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_14725 f40ce738caf9ca9c726e2fc116ba2daa 122 Pfam PF01022 Bacterial regulatory protein, arsR family 20 64 5.5E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_14725 f40ce738caf9ca9c726e2fc116ba2daa 122 SMART SM00418 13 91 9.2E-24 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_14725 f40ce738caf9ca9c726e2fc116ba2daa 122 Gene3D G3DSA:1.10.10.10 3 100 1.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_14725 f40ce738caf9ca9c726e2fc116ba2daa 122 SUPERFAMILY SSF46785 11 109 6.24E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_13215 d17a31bfd86436232ce5f12e225e93e8 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ATC04_13215 d17a31bfd86436232ce5f12e225e93e8 384 SUPERFAMILY SSF47203 232 382 1.93E-47 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_13215 d17a31bfd86436232ce5f12e225e93e8 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 221 5.4E-19 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_13215 d17a31bfd86436232ce5f12e225e93e8 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ATC04_13215 d17a31bfd86436232ce5f12e225e93e8 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 1.3E-31 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_13215 d17a31bfd86436232ce5f12e225e93e8 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 1.8E-45 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_13215 d17a31bfd86436232ce5f12e225e93e8 384 PIRSF PIRSF016578 130 366 1.3E-6 T 11-10-2018 ATC04_13215 d17a31bfd86436232ce5f12e225e93e8 384 PIRSF PIRSF016578 4 113 5.6E-5 T 11-10-2018 ATC04_13215 d17a31bfd86436232ce5f12e225e93e8 384 Gene3D G3DSA:1.20.140.10 240 384 9.9E-47 T 11-10-2018 ATC04_13215 d17a31bfd86436232ce5f12e225e93e8 384 Gene3D G3DSA:2.40.110.10 123 239 7.5E-33 T 11-10-2018 ATC04_13215 d17a31bfd86436232ce5f12e225e93e8 384 Gene3D G3DSA:1.10.540.10 1 121 1.1E-38 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_13215 d17a31bfd86436232ce5f12e225e93e8 384 SUPERFAMILY SSF56645 2 247 2.49E-71 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_12820 ee9a4b1650383762a056fda9e30b8d62 300 Gene3D G3DSA:3.40.190.10 93 287 9.6E-47 T 11-10-2018 ATC04_12820 ee9a4b1650383762a056fda9e30b8d62 300 SUPERFAMILY SSF46785 1 81 1.48E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_12820 ee9a4b1650383762a056fda9e30b8d62 300 SUPERFAMILY SSF53850 91 294 3.41E-31 T 11-10-2018 ATC04_12820 ee9a4b1650383762a056fda9e30b8d62 300 Gene3D G3DSA:3.40.190.10 164 268 9.6E-47 T 11-10-2018 ATC04_12820 ee9a4b1650383762a056fda9e30b8d62 300 Pfam PF03466 LysR substrate binding domain 91 292 7.1E-34 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_12820 ee9a4b1650383762a056fda9e30b8d62 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.1E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_12820 ee9a4b1650383762a056fda9e30b8d62 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_12820 ee9a4b1650383762a056fda9e30b8d62 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_12820 ee9a4b1650383762a056fda9e30b8d62 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_12820 ee9a4b1650383762a056fda9e30b8d62 300 Gene3D G3DSA:1.10.10.10 1 90 1.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16825 e5f68eb73a5856bf2c2500dd082d136c 551 SUPERFAMILY SSF52518 9 185 5.4E-46 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_16825 e5f68eb73a5856bf2c2500dd082d136c 551 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 178 1.8E-45 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ATC04_16825 e5f68eb73a5856bf2c2500dd082d136c 551 Gene3D G3DSA:3.40.50.970 1 183 3.4E-51 T 11-10-2018 ATC04_16825 e5f68eb73a5856bf2c2500dd082d136c 551 SUPERFAMILY SSF52467 162 358 1.17E-26 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ATC04_16825 e5f68eb73a5856bf2c2500dd082d136c 551 Gene3D G3DSA:3.40.50.970 365 550 1.6E-52 T 11-10-2018 ATC04_16825 e5f68eb73a5856bf2c2500dd082d136c 551 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 332 4.2E-16 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ATC04_16825 e5f68eb73a5856bf2c2500dd082d136c 551 SUPERFAMILY SSF52518 374 546 1.34E-51 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_16825 e5f68eb73a5856bf2c2500dd082d136c 551 Gene3D G3DSA:3.40.50.1220 194 362 1.6E-24 T 11-10-2018 ATC04_16825 e5f68eb73a5856bf2c2500dd082d136c 551 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 541 3.0E-37 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ATC04_13535 6f2103e2e1b395f5c1533782fae2f2aa 372 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 11 369 28.845 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 ATC04_13535 6f2103e2e1b395f5c1533782fae2f2aa 372 PIRSF PIRSF000443 3 370 3.6E-115 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 ATC04_13535 6f2103e2e1b395f5c1533782fae2f2aa 372 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 21 365 7.3E-129 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 ATC04_13535 6f2103e2e1b395f5c1533782fae2f2aa 372 PRINTS PR00111 Alpha/beta hydrolase fold signature 147 160 1.2E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_13535 6f2103e2e1b395f5c1533782fae2f2aa 372 PRINTS PR00111 Alpha/beta hydrolase fold signature 161 174 1.2E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_13535 6f2103e2e1b395f5c1533782fae2f2aa 372 SUPERFAMILY SSF53474 18 365 1.87E-86 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_13535 6f2103e2e1b395f5c1533782fae2f2aa 372 Pfam PF00561 alpha/beta hydrolase fold 49 356 6.9E-31 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_13535 6f2103e2e1b395f5c1533782fae2f2aa 372 Gene3D G3DSA:3.40.50.1820 25 361 1.3E-125 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_13535 6f2103e2e1b395f5c1533782fae2f2aa 372 Gene3D G3DSA:1.10.1740.110 181 290 1.3E-125 T 11-10-2018 ATC04_12490 f0b7e86b486d9a0dcabe1374ad237cd0 343 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 129 1.6E-26 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ATC04_12490 f0b7e86b486d9a0dcabe1374ad237cd0 343 Gene3D G3DSA:3.30.360.10 150 316 1.2E-113 T 11-10-2018 ATC04_12490 f0b7e86b486d9a0dcabe1374ad237cd0 343 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 141 157 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATC04_12490 f0b7e86b486d9a0dcabe1374ad237cd0 343 SMART SM00859 4 136 2.6E-42 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ATC04_12490 f0b7e86b486d9a0dcabe1374ad237cd0 343 SUPERFAMILY SSF55347 146 311 1.85E-46 T 11-10-2018 ATC04_12490 f0b7e86b486d9a0dcabe1374ad237cd0 343 SUPERFAMILY SSF51735 3 176 9.44E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_12490 f0b7e86b486d9a0dcabe1374ad237cd0 343 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 337 38.182 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATC04_12490 f0b7e86b486d9a0dcabe1374ad237cd0 343 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 156 314 2.4E-19 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATC04_12490 f0b7e86b486d9a0dcabe1374ad237cd0 343 Gene3D G3DSA:3.40.50.720 5 329 1.2E-113 T 11-10-2018 ATC04_12490 f0b7e86b486d9a0dcabe1374ad237cd0 343 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 4 343 6.2E-113 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATC04_06925 d30121d25fba22473cf2c8ff7dabacca 462 Gene3D G3DSA:3.90.660.20 28 411 2.3E-97 T 11-10-2018 ATC04_06925 d30121d25fba22473cf2c8ff7dabacca 462 SUPERFAMILY SSF54373 300 408 1.1E-12 T 11-10-2018 ATC04_06925 d30121d25fba22473cf2c8ff7dabacca 462 Gene3D G3DSA:3.50.50.60 1 453 2.3E-97 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_06925 d30121d25fba22473cf2c8ff7dabacca 462 Gene3D G3DSA:1.10.3110.10 99 193 2.3E-97 T 11-10-2018 ATC04_06925 d30121d25fba22473cf2c8ff7dabacca 462 SUPERFAMILY SSF51905 1 457 1.75E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_06925 d30121d25fba22473cf2c8ff7dabacca 462 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 1 457 1.5E-34 T 11-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATC04_06925 d30121d25fba22473cf2c8ff7dabacca 462 Pfam PF01593 Flavin containing amine oxidoreductase 5 457 6.1E-31 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 Gene3D G3DSA:3.10.350.10 284 335 6.9E-14 T 11-10-2018 IPR036779 LysM domain superfamily ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 Gene3D G3DSA:3.10.350.10 85 135 3.9E-9 T 11-10-2018 IPR036779 LysM domain superfamily ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 Pfam PF01476 LysM domain 355 398 6.1E-8 T 11-10-2018 IPR018392 LysM domain ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 Pfam PF01476 LysM domain 287 329 3.4E-13 T 11-10-2018 IPR018392 LysM domain ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 Pfam PF01476 LysM domain 220 262 2.9E-11 T 11-10-2018 IPR018392 LysM domain ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 Pfam PF01476 LysM domain 95 130 1.4E-7 T 11-10-2018 IPR018392 LysM domain ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 Pfam PF01476 LysM domain 151 193 5.0E-14 T 11-10-2018 IPR018392 LysM domain ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 SUPERFAMILY SSF54106 91 130 1.44E-5 T 11-10-2018 ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 Gene3D G3DSA:3.10.350.10 136 205 1.1E-15 T 11-10-2018 IPR036779 LysM domain superfamily ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 Gene3D G3DSA:3.10.350.10 336 411 1.0E-11 T 11-10-2018 IPR036779 LysM domain superfamily ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 Gene3D G3DSA:3.10.350.10 206 279 7.0E-16 T 11-10-2018 IPR036779 LysM domain superfamily ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 SUPERFAMILY SSF54106 353 399 4.19E-7 T 11-10-2018 ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 SMART SM00257 354 399 9.2E-9 T 11-10-2018 IPR018392 LysM domain ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 SMART SM00257 87 130 6.2E-8 T 11-10-2018 IPR018392 LysM domain ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 SMART SM00257 150 194 6.7E-14 T 11-10-2018 IPR018392 LysM domain ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 SMART SM00257 219 263 3.6E-11 T 11-10-2018 IPR018392 LysM domain ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 SMART SM00257 286 330 2.0E-13 T 11-10-2018 IPR018392 LysM domain ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 SUPERFAMILY SSF54106 219 263 1.44E-8 T 11-10-2018 ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 Pfam PF01464 Transglycosylase SLT domain 457 560 1.2E-18 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 SUPERFAMILY SSF54106 285 330 1.31E-8 T 11-10-2018 ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 Gene3D G3DSA:1.10.530.10 434 572 6.9E-30 T 11-10-2018 ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 SUPERFAMILY SSF53955 447 574 5.96E-30 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ATC04_07275 85c43dd9691dc7c177f0ec0a7be69db3 574 SUPERFAMILY SSF54106 149 193 2.75E-9 T 11-10-2018 ATC04_04835 f4e9bc24933c58bc94c8b606f00a3104 568 PIRSF PIRSF001394 29 564 3.0E-210 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 ATC04_04835 f4e9bc24933c58bc94c8b606f00a3104 568 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 390 553 4.0E-57 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ATC04_04835 f4e9bc24933c58bc94c8b606f00a3104 568 ProSitePatterns PS00163 Fumarate lyases signature. 473 482 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ATC04_04835 f4e9bc24933c58bc94c8b606f00a3104 568 Pfam PF05681 Fumarate hydratase (Fumerase) 50 328 2.4E-81 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 ATC04_04835 f4e9bc24933c58bc94c8b606f00a3104 568 Pfam PF05683 Fumarase C-terminus 335 554 2.6E-90 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ATC04_04835 f4e9bc24933c58bc94c8b606f00a3104 568 Gene3D G3DSA:3.20.130.10 366 553 1.7E-57 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 ATC04_04835 f4e9bc24933c58bc94c8b606f00a3104 568 SUPERFAMILY SSF117457 378 552 4.84E-61 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 ATC04_15465 0cb1f24ff0511f17e17104d9d755ac9f 394 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 274 289 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ATC04_15465 0cb1f24ff0511f17e17104d9d755ac9f 394 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2 218 5.1E-54 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ATC04_15465 0cb1f24ff0511f17e17104d9d755ac9f 394 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 87 94 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ATC04_15465 0cb1f24ff0511f17e17104d9d755ac9f 394 Gene3D G3DSA:3.30.1330.50 233 394 5.2E-52 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ATC04_15465 0cb1f24ff0511f17e17104d9d755ac9f 394 SUPERFAMILY SSF53448 1 219 2.17E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_15465 0cb1f24ff0511f17e17104d9d755ac9f 394 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2 219 4.5E-58 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ATC04_15465 0cb1f24ff0511f17e17104d9d755ac9f 394 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 239 391 1.3E-38 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ATC04_15465 0cb1f24ff0511f17e17104d9d755ac9f 394 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 238 392 29.385 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ATC04_15465 0cb1f24ff0511f17e17104d9d755ac9f 394 Gene3D G3DSA:3.90.550.10 1 219 9.7E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_15465 0cb1f24ff0511f17e17104d9d755ac9f 394 Pfam PF02542 YgbB family 239 390 4.6E-41 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ATC04_15465 0cb1f24ff0511f17e17104d9d755ac9f 394 SUPERFAMILY SSF69765 237 392 6.93E-45 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ATC04_15465 0cb1f24ff0511f17e17104d9d755ac9f 394 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 1 220 36.126 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ATC04_04445 da43174a86460b5ee6135a727e5fe147 191 SUPERFAMILY SSF52218 1 149 4.35E-35 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ATC04_04445 da43174a86460b5ee6135a727e5fe147 191 Pfam PF03358 NADPH-dependent FMN reductase 3 140 1.8E-33 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ATC04_04445 da43174a86460b5ee6135a727e5fe147 191 Gene3D G3DSA:3.40.50.360 1 190 2.9E-42 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ATC04_14580 2876f94d9fa736a14ae23310a340add3 107 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 90 1.9E-12 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ATC04_14580 2876f94d9fa736a14ae23310a340add3 107 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 40 50 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 ATC04_14580 2876f94d9fa736a14ae23310a340add3 107 PRINTS PR00355 Adrenodoxin signature 40 50 2.3E-8 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 ATC04_14580 2876f94d9fa736a14ae23310a340add3 107 PRINTS PR00355 Adrenodoxin signature 83 91 2.3E-8 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 ATC04_14580 2876f94d9fa736a14ae23310a340add3 107 PRINTS PR00355 Adrenodoxin signature 59 73 2.3E-8 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 ATC04_14580 2876f94d9fa736a14ae23310a340add3 107 Gene3D G3DSA:3.10.20.30 1 107 1.4E-30 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ATC04_14580 2876f94d9fa736a14ae23310a340add3 107 SUPERFAMILY SSF54292 3 102 2.84E-26 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ATC04_10705 51449b383c8f3b6fadefe8499240f098 589 Gene3D G3DSA:3.40.50.300 80 298 8.4E-15 T 11-10-2018 ATC04_10705 51449b383c8f3b6fadefe8499240f098 589 SUPERFAMILY SSF52540 72 278 1.68E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10705 51449b383c8f3b6fadefe8499240f098 589 Pfam PF00350 Dynamin family 80 207 3.6E-11 T 11-10-2018 IPR022812 Dynamin superfamily ATC04_01430 679addd3399d8818f25fbc0efbb2b35a 371 SUPERFAMILY SSF56645 1 197 7.07E-35 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_01430 679addd3399d8818f25fbc0efbb2b35a 371 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 363 2.4E-23 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_01430 679addd3399d8818f25fbc0efbb2b35a 371 Gene3D G3DSA:1.10.540.10 1 121 7.1E-31 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_01430 679addd3399d8818f25fbc0efbb2b35a 371 SUPERFAMILY SSF47203 227 365 6.6E-34 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_01430 679addd3399d8818f25fbc0efbb2b35a 371 Gene3D G3DSA:1.20.140.10 228 367 8.9E-33 T 11-10-2018 ATC04_01430 679addd3399d8818f25fbc0efbb2b35a 371 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 119 1.9E-17 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_01430 679addd3399d8818f25fbc0efbb2b35a 371 Gene3D G3DSA:2.40.110.10 127 225 3.2E-6 T 11-10-2018 ATC04_05970 e30a0b6a421d650f5b6cae0787061f8e 204 Pfam PF08768 Domain of unknown function (DUF1794) 12 196 1.3E-36 T 11-10-2018 IPR014878 Domain of unknown function DUF1794 ATC04_05970 e30a0b6a421d650f5b6cae0787061f8e 204 SUPERFAMILY SSF50814 8 197 2.3E-32 T 11-10-2018 IPR012674 Calycin ATC04_05970 e30a0b6a421d650f5b6cae0787061f8e 204 Gene3D G3DSA:2.40.128.20 102 199 2.3E-17 T 11-10-2018 IPR012674 Calycin ATC04_05970 e30a0b6a421d650f5b6cae0787061f8e 204 Gene3D G3DSA:2.40.128.20 2 95 1.0E-22 T 11-10-2018 IPR012674 Calycin ATC04_05970 e30a0b6a421d650f5b6cae0787061f8e 204 Hamap MF_01297 UPF0678 fatty acid-binding protein-like protein . 5 198 26.412 T 11-10-2018 IPR022939 Uncharacterised protein family UPF0678 ATC04_06520 436a2612e77e51badc5833461da789db 424 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 30 414 2.3E-120 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 ATC04_06520 436a2612e77e51badc5833461da789db 424 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 16 414 22.567 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 ATC04_06520 436a2612e77e51badc5833461da789db 424 Pfam PF13742 OB-fold nucleic acid binding domain 30 118 1.4E-15 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 ATC04_06520 436a2612e77e51badc5833461da789db 424 Pfam PF02601 Exonuclease VII, large subunit 142 360 4.4E-60 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 ATC04_06520 436a2612e77e51badc5833461da789db 424 Pfam PF02601 Exonuclease VII, large subunit 334 411 3.1E-10 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 ATC04_16890 9d567dbfd150edbccb6488c37ee16c43 412 TIGRFAM TIGR00836 amt: ammonium transporter 5 407 1.7E-117 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 ATC04_16890 9d567dbfd150edbccb6488c37ee16c43 412 ProSitePatterns PS01219 Ammonium transporters signature. 166 191 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 ATC04_16890 9d567dbfd150edbccb6488c37ee16c43 412 Pfam PF00909 Ammonium Transporter Family 7 407 9.1E-110 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 ATC04_16890 9d567dbfd150edbccb6488c37ee16c43 412 Gene3D G3DSA:1.10.3430.10 1 411 9.0E-114 T 11-10-2018 IPR029020 Ammonium/urea transporter ATC04_16890 9d567dbfd150edbccb6488c37ee16c43 412 SUPERFAMILY SSF111352 3 388 1.2E-94 T 11-10-2018 ATC04_13720 fa56ceb59e042d9f5aec1aab542e645f 301 SUPERFAMILY SSF161098 96 283 3.01E-24 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_13720 fa56ceb59e042d9f5aec1aab542e645f 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 299 4.2E-30 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_13720 fa56ceb59e042d9f5aec1aab542e645f 301 Gene3D G3DSA:1.10.3720.10 91 294 4.5E-21 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_00265 c8eaf4dfb438ce6b9c2eb58e82fd73fa 159 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 52 58 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ATC04_00265 c8eaf4dfb438ce6b9c2eb58e82fd73fa 159 SUPERFAMILY SSF50324 4 158 1.31E-54 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ATC04_00265 c8eaf4dfb438ce6b9c2eb58e82fd73fa 159 Gene3D G3DSA:3.90.80.10 1 159 2.4E-61 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ATC04_00265 c8eaf4dfb438ce6b9c2eb58e82fd73fa 159 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 1 158 32.03 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ATC04_00265 c8eaf4dfb438ce6b9c2eb58e82fd73fa 159 Pfam PF00719 Inorganic pyrophosphatase 5 158 1.0E-51 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ATC04_06275 60e45e97f717632a7c2cf919f525bad8 166 SUPERFAMILY SSF54211 43 166 6.83E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_06275 60e45e97f717632a7c2cf919f525bad8 166 Pfam PF00380 Ribosomal protein S9/S16 45 166 1.5E-44 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 ATC04_06275 60e45e97f717632a7c2cf919f525bad8 166 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 36 166 32.211 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid ATC04_06275 60e45e97f717632a7c2cf919f525bad8 166 Gene3D G3DSA:3.30.230.10 41 166 4.6E-48 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATC04_06275 60e45e97f717632a7c2cf919f525bad8 166 ProSitePatterns PS00360 Ribosomal protein S9 signature. 104 122 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 ATC04_02745 21832ea451aa9620f2950066f67b3a59 182 SUPERFAMILY SSF160904 1 176 3.4E-38 T 11-10-2018 ATC04_02745 21832ea451aa9620f2950066f67b3a59 182 Pfam PF07336 Putative stress-induced transcription regulator 13 127 1.5E-13 T 11-10-2018 IPR010852 Putative stress-induced transcription regulator ATC04_02745 21832ea451aa9620f2950066f67b3a59 182 Gene3D G3DSA:1.10.3300.10 3 179 2.2E-38 T 11-10-2018 IPR023286 ABATE domain superfamily ATC04_02745 21832ea451aa9620f2950066f67b3a59 182 Pfam PF11706 CGNR zinc finger 134 177 2.2E-14 T 11-10-2018 IPR021005 Zinc finger, CGNR ATC04_04270 ce9ebb7eefa65de758337bbeb4635f0e 651 Gene3D G3DSA:3.40.50.1820 375 648 4.5E-75 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_04270 ce9ebb7eefa65de758337bbeb4635f0e 651 Pfam PF00326 Prolyl oligopeptidase family 435 640 5.4E-46 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATC04_04270 ce9ebb7eefa65de758337bbeb4635f0e 651 SUPERFAMILY SSF53474 382 639 4.61E-60 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_04270 ce9ebb7eefa65de758337bbeb4635f0e 651 SUPERFAMILY SSF82171 155 364 6.08E-10 T 11-10-2018 ATC04_16735 9b3cfa1fa308cefa56cf21e70ee8d12b 186 SMART SM00855 4 148 3.6E-24 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_16735 9b3cfa1fa308cefa56cf21e70ee8d12b 186 Gene3D G3DSA:3.40.50.1240 1 180 3.8E-43 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_16735 9b3cfa1fa308cefa56cf21e70ee8d12b 186 PIRSF PIRSF000709 3 100 1.1E-6 T 11-10-2018 ATC04_16735 9b3cfa1fa308cefa56cf21e70ee8d12b 186 PIRSF PIRSF000709 111 153 100.0 T 11-10-2018 ATC04_16735 9b3cfa1fa308cefa56cf21e70ee8d12b 186 SUPERFAMILY SSF53254 3 167 1.96E-44 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_16735 9b3cfa1fa308cefa56cf21e70ee8d12b 186 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 155 2.4E-40 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_16735 9b3cfa1fa308cefa56cf21e70ee8d12b 186 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 ATC04_14640 8bbb09f3440d4fb4449c6cefc2ab7de3 313 SUPERFAMILY SSF46785 9 89 2.94E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_14640 8bbb09f3440d4fb4449c6cefc2ab7de3 313 Gene3D G3DSA:1.10.10.10 6 89 1.6E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_14640 8bbb09f3440d4fb4449c6cefc2ab7de3 313 Gene3D G3DSA:3.40.190.10 176 277 3.5E-9 T 11-10-2018 ATC04_14640 8bbb09f3440d4fb4449c6cefc2ab7de3 313 SUPERFAMILY SSF53850 108 302 5.79E-19 T 11-10-2018 ATC04_14640 8bbb09f3440d4fb4449c6cefc2ab7de3 313 Gene3D G3DSA:3.40.190.10 125 297 3.5E-9 T 11-10-2018 ATC04_14640 8bbb09f3440d4fb4449c6cefc2ab7de3 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_14640 8bbb09f3440d4fb4449c6cefc2ab7de3 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_14640 8bbb09f3440d4fb4449c6cefc2ab7de3 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_14640 8bbb09f3440d4fb4449c6cefc2ab7de3 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 5.8E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_14640 8bbb09f3440d4fb4449c6cefc2ab7de3 313 Pfam PF03466 LysR substrate binding domain 126 301 6.2E-8 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_16775 507eedcb1668397680d74972af052398 327 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 313 3.0E-79 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 ATC04_16775 507eedcb1668397680d74972af052398 327 Gene3D G3DSA:3.40.1190.20 1 319 1.8E-85 T 11-10-2018 IPR029056 Ribokinase-like ATC04_16775 507eedcb1668397680d74972af052398 327 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 261 274 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ATC04_16775 507eedcb1668397680d74972af052398 327 Pfam PF00294 pfkB family carbohydrate kinase 25 306 1.7E-28 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ATC04_16775 507eedcb1668397680d74972af052398 327 PIRSF PIRSF000535 1 320 7.2E-57 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 ATC04_16775 507eedcb1668397680d74972af052398 327 SUPERFAMILY SSF53613 1 307 2.96E-44 T 11-10-2018 IPR029056 Ribokinase-like ATC04_11270 29f7e7449636d128c8155c4951c85e79 279 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 15 71 1.6E-19 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain ATC04_11270 29f7e7449636d128c8155c4951c85e79 279 SUPERFAMILY SSF103088 155 262 1.2E-21 T 11-10-2018 IPR036737 OmpA-like domain superfamily ATC04_11270 29f7e7449636d128c8155c4951c85e79 279 Pfam PF00691 OmpA family 161 250 6.5E-16 T 11-10-2018 IPR006665 OmpA-like domain ATC04_11270 29f7e7449636d128c8155c4951c85e79 279 Gene3D G3DSA:3.30.1330.60 113 277 1.3E-33 T 11-10-2018 IPR036737 OmpA-like domain superfamily ATC04_13220 7853bd14fd34610689d220b6d5e4489a 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 4.8E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_13220 7853bd14fd34610689d220b6d5e4489a 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 4.8E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_13220 7853bd14fd34610689d220b6d5e4489a 206 SUPERFAMILY SSF46689 14 97 7.7E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_13220 7853bd14fd34610689d220b6d5e4489a 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 6.2E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_13220 7853bd14fd34610689d220b6d5e4489a 206 Gene3D G3DSA:1.10.10.60 20 62 2.0E-20 T 11-10-2018 ATC04_13220 7853bd14fd34610689d220b6d5e4489a 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 69 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ATC04_13220 7853bd14fd34610689d220b6d5e4489a 206 Gene3D G3DSA:1.10.357.10 64 204 1.7E-28 T 11-10-2018 ATC04_15080 8c332526d94651291fdbd821ac0f42b4 198 SUPERFAMILY SSF48150 14 190 4.71E-65 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATC04_15080 8c332526d94651291fdbd821ac0f42b4 198 Pfam PF03352 Methyladenine glycosylase 17 187 1.6E-66 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 ATC04_15080 8c332526d94651291fdbd821ac0f42b4 198 Gene3D G3DSA:1.10.340.30 12 193 4.3E-71 T 11-10-2018 ATC04_17310 73c3fc33674ca7191f8ccb3c8fa8889d 110 Gene3D G3DSA:3.40.1260.10 8 110 1.8E-12 T 11-10-2018 IPR027396 DsrEFH-like ATC04_17310 73c3fc33674ca7191f8ccb3c8fa8889d 110 SUPERFAMILY SSF75169 9 109 5.59E-13 T 11-10-2018 IPR027396 DsrEFH-like ATC04_09345 ad28d1ccc9da25b6c5225d847a098dc2 242 PRINTS PR00783 Major intrinsic protein family signature 174 196 9.5E-34 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_09345 ad28d1ccc9da25b6c5225d847a098dc2 242 PRINTS PR00783 Major intrinsic protein family signature 91 110 9.5E-34 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_09345 ad28d1ccc9da25b6c5225d847a098dc2 242 PRINTS PR00783 Major intrinsic protein family signature 221 241 9.5E-34 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_09345 ad28d1ccc9da25b6c5225d847a098dc2 242 PRINTS PR00783 Major intrinsic protein family signature 4 23 9.5E-34 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_09345 ad28d1ccc9da25b6c5225d847a098dc2 242 PRINTS PR00783 Major intrinsic protein family signature 146 164 9.5E-34 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_09345 ad28d1ccc9da25b6c5225d847a098dc2 242 Gene3D G3DSA:1.20.1080.10 2 242 1.9E-65 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 ATC04_09345 ad28d1ccc9da25b6c5225d847a098dc2 242 Pfam PF00230 Major intrinsic protein 4 237 5.0E-37 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ATC04_09345 ad28d1ccc9da25b6c5225d847a098dc2 242 SUPERFAMILY SSF81338 4 239 8.63E-60 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 ATC04_09345 ad28d1ccc9da25b6c5225d847a098dc2 242 ProSitePatterns PS00221 MIP family signature. 63 71 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 ATC04_01050 67501392e299249b2cba54caaa0f46e6 512 SUPERFAMILY SSF52540 4 229 2.07E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_01050 67501392e299249b2cba54caaa0f46e6 512 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_01050 67501392e299249b2cba54caaa0f46e6 512 Pfam PF00005 ABC transporter 21 172 1.1E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_01050 67501392e299249b2cba54caaa0f46e6 512 SMART SM00382 30 222 1.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_01050 67501392e299249b2cba54caaa0f46e6 512 SMART SM00382 289 484 0.0088 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_01050 67501392e299249b2cba54caaa0f46e6 512 Gene3D G3DSA:3.40.50.300 261 511 1.3E-39 T 11-10-2018 ATC04_01050 67501392e299249b2cba54caaa0f46e6 512 Gene3D G3DSA:3.40.50.300 1 240 7.0E-58 T 11-10-2018 ATC04_01050 67501392e299249b2cba54caaa0f46e6 512 SUPERFAMILY SSF52540 250 496 1.31E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_01050 67501392e299249b2cba54caaa0f46e6 512 Pfam PF00005 ABC transporter 281 436 3.4E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_13020 058f18b02dbd57ffd4cfbbedea17bc68 247 Gene3D G3DSA:3.40.50.880 1 222 1.6E-69 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_13020 058f18b02dbd57ffd4cfbbedea17bc68 247 SUPERFAMILY SSF52317 2 221 1.39E-64 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_13020 058f18b02dbd57ffd4cfbbedea17bc68 247 Pfam PF01965 DJ-1/PfpI family 26 209 1.3E-12 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ATC04_06320 a0ce0370bf9e7c8c58eb85f260699d57 623 Pfam PF13522 Glutamine amidotransferase domain 72 192 2.2E-17 T 11-10-2018 ATC04_06320 a0ce0370bf9e7c8c58eb85f260699d57 623 SUPERFAMILY SSF56235 2 241 1.12E-61 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ATC04_06320 a0ce0370bf9e7c8c58eb85f260699d57 623 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 623 39.141 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 ATC04_06320 a0ce0370bf9e7c8c58eb85f260699d57 623 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 623 3.0E-234 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 ATC04_06320 a0ce0370bf9e7c8c58eb85f260699d57 623 Gene3D G3DSA:3.40.50.10490 457 608 1.7E-142 T 11-10-2018 ATC04_06320 a0ce0370bf9e7c8c58eb85f260699d57 623 Gene3D G3DSA:3.40.50.10490 257 622 1.7E-142 T 11-10-2018 ATC04_06320 a0ce0370bf9e7c8c58eb85f260699d57 623 Gene3D G3DSA:3.60.20.10 2 250 8.1E-66 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ATC04_06320 a0ce0370bf9e7c8c58eb85f260699d57 623 SUPERFAMILY SSF53697 255 623 3.43E-110 T 11-10-2018 ATC04_06320 a0ce0370bf9e7c8c58eb85f260699d57 623 Pfam PF01380 SIS domain 472 604 4.9E-23 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ATC04_06320 a0ce0370bf9e7c8c58eb85f260699d57 623 Pfam PF01380 SIS domain 300 425 4.9E-32 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ATC04_08415 e2b5300ad3daa2abf668d329431ef68d 165 Gene3D G3DSA:3.30.300.20 2 152 3.7E-48 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ATC04_08415 e2b5300ad3daa2abf668d329431ef68d 165 SUPERFAMILY SSF82784 5 152 2.36E-42 T 11-10-2018 IPR036102 OsmC/Ohr superfamily ATC04_08415 e2b5300ad3daa2abf668d329431ef68d 165 Pfam PF02566 OsmC-like protein 52 145 7.9E-16 T 11-10-2018 IPR003718 OsmC/Ohr family ATC04_11780 d2e5b14b407dc8ef50f4726f1e384315 482 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 14 472 3.4E-233 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 ATC04_11780 d2e5b14b407dc8ef50f4726f1e384315 482 Gene3D G3DSA:3.40.50.300 91 361 1.6E-102 T 11-10-2018 ATC04_11780 d2e5b14b407dc8ef50f4726f1e384315 482 SMART SM00382 158 344 8.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_11780 d2e5b14b407dc8ef50f4726f1e384315 482 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_11780 d2e5b14b407dc8ef50f4726f1e384315 482 SUPERFAMILY SSF50615 14 89 1.41E-22 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_11780 d2e5b14b407dc8ef50f4726f1e384315 482 SUPERFAMILY SSF52540 92 364 6.86E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11780 d2e5b14b407dc8ef50f4726f1e384315 482 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 359 6.5E-63 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_11780 d2e5b14b407dc8ef50f4726f1e384315 482 Hamap MF_01347 ATP synthase subunit beta [atpB]. 12 477 53.23 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 ATC04_11780 d2e5b14b407dc8ef50f4726f1e384315 482 SUPERFAMILY SSF47917 362 478 2.41E-45 T 11-10-2018 ATC04_11780 d2e5b14b407dc8ef50f4726f1e384315 482 Gene3D G3DSA:1.10.1140.10 362 482 2.8E-46 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_11780 d2e5b14b407dc8ef50f4726f1e384315 482 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 17 88 2.7E-18 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_11780 d2e5b14b407dc8ef50f4726f1e384315 482 Gene3D G3DSA:2.40.10.170 11 90 1.1E-25 T 11-10-2018 ATC04_00315 4e2ff0accc407b129100943ca9a62dbf 348 SUPERFAMILY SSF111331 48 348 1.72E-59 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ATC04_00315 4e2ff0accc407b129100943ca9a62dbf 348 Pfam PF00781 Diacylglycerol kinase catalytic domain 50 171 6.4E-23 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ATC04_00315 4e2ff0accc407b129100943ca9a62dbf 348 Gene3D G3DSA:3.40.50.10330 44 182 4.6E-28 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ATC04_00315 4e2ff0accc407b129100943ca9a62dbf 348 SMART SM00046 50 175 3.0E-7 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ATC04_00315 4e2ff0accc407b129100943ca9a62dbf 348 Gene3D G3DSA:2.60.200.40 183 339 7.6E-31 T 11-10-2018 ATC04_01585 92c3bb0f496113191b7dbd4e9da194bd 258 PIRSF PIRSF000090 1 258 6.9E-62 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 ATC04_01585 92c3bb0f496113191b7dbd4e9da194bd 258 SUPERFAMILY SSF52402 1 252 2.02E-62 T 11-10-2018 ATC04_01585 92c3bb0f496113191b7dbd4e9da194bd 258 Pfam PF01012 Electron transfer flavoprotein domain 28 208 1.1E-34 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_01585 92c3bb0f496113191b7dbd4e9da194bd 258 SMART SM00893 23 213 1.7E-38 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_01585 92c3bb0f496113191b7dbd4e9da194bd 258 Gene3D G3DSA:3.40.50.620 1 251 1.1E-71 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_12025 aaf6ef9602e59297b39c5152ab84a1f2 371 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ATC04_12025 aaf6ef9602e59297b39c5152ab84a1f2 371 Pfam PF00472 RF-1 domain 229 336 4.3E-36 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ATC04_12025 aaf6ef9602e59297b39c5152ab84a1f2 371 SMART SM00937 84 194 2.8E-46 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 ATC04_12025 aaf6ef9602e59297b39c5152ab84a1f2 371 Gene3D G3DSA:3.30.70.1660 129 357 7.1E-87 T 11-10-2018 ATC04_12025 aaf6ef9602e59297b39c5152ab84a1f2 371 SUPERFAMILY SSF75620 30 366 1.31E-116 T 11-10-2018 ATC04_12025 aaf6ef9602e59297b39c5152ab84a1f2 371 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 364 35.96 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 ATC04_12025 aaf6ef9602e59297b39c5152ab84a1f2 371 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 363 2.0E-144 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 ATC04_12025 aaf6ef9602e59297b39c5152ab84a1f2 371 Gene3D G3DSA:1.20.58.410 3 115 4.5E-23 T 11-10-2018 ATC04_12025 aaf6ef9602e59297b39c5152ab84a1f2 371 Pfam PF03462 PCRF domain 30 219 1.6E-53 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 ATC04_12025 aaf6ef9602e59297b39c5152ab84a1f2 371 Gene3D G3DSA:3.30.160.20 225 319 7.1E-87 T 11-10-2018 ATC04_09470 e986f383b5fb9be96af529e5c2f97f2d 249 TIGRFAM TIGR00613 reco: DNA repair protein RecO 12 244 4.0E-29 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ATC04_09470 e986f383b5fb9be96af529e5c2f97f2d 249 Gene3D G3DSA:2.40.50.140 7 89 9.8E-28 T 11-10-2018 ATC04_09470 e986f383b5fb9be96af529e5c2f97f2d 249 Pfam PF02565 Recombination protein O C terminal 92 244 6.3E-29 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ATC04_09470 e986f383b5fb9be96af529e5c2f97f2d 249 Pfam PF11967 Recombination protein O N terminal 11 85 3.9E-22 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal ATC04_09470 e986f383b5fb9be96af529e5c2f97f2d 249 SUPERFAMILY SSF57863 89 238 1.88E-35 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger ATC04_09470 e986f383b5fb9be96af529e5c2f97f2d 249 Hamap MF_00201 DNA repair protein RecO [recO]. 9 249 24.603 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ATC04_09470 e986f383b5fb9be96af529e5c2f97f2d 249 SUPERFAMILY SSF50249 10 85 2.74E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_16605 59d5a1d88cd6910d40ad0fac88d43b90 135 SUPERFAMILY SSF142906 14 129 3.92E-34 T 11-10-2018 IPR038056 YjbR-like superfamily ATC04_16605 59d5a1d88cd6910d40ad0fac88d43b90 135 Gene3D G3DSA:3.90.1150.30 8 134 4.3E-41 T 11-10-2018 IPR038056 YjbR-like superfamily ATC04_16605 59d5a1d88cd6910d40ad0fac88d43b90 135 Pfam PF04237 YjbR 23 118 2.3E-25 T 11-10-2018 IPR007351 Uncharacterised protein YjbR ATC04_09005 509b0baf1aed366ea3f0245eca2d3bc5 417 Pfam PF04055 Radical SAM superfamily 79 234 6.9E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ATC04_09005 509b0baf1aed366ea3f0245eca2d3bc5 417 Gene3D G3DSA:3.20.20.70 30 337 1.8E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_09005 509b0baf1aed366ea3f0245eca2d3bc5 417 SUPERFAMILY SSF102114 28 334 1.31E-70 T 11-10-2018 ATC04_09005 509b0baf1aed366ea3f0245eca2d3bc5 417 SMART SM00876 246 336 1.1E-29 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ATC04_09005 509b0baf1aed366ea3f0245eca2d3bc5 417 SMART SM00729 69 275 3.2E-27 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ATC04_09005 509b0baf1aed366ea3f0245eca2d3bc5 417 TIGRFAM TIGR00433 bioB: biotin synthase 46 334 6.8E-112 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ATC04_09005 509b0baf1aed366ea3f0245eca2d3bc5 417 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 246 334 7.9E-14 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ATC04_09005 509b0baf1aed366ea3f0245eca2d3bc5 417 Hamap MF_01694 Biotin synthase [bioB]. 29 337 38.976 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ATC04_14055 271b78a439b201997f38e785bd1db958 596 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_14055 271b78a439b201997f38e785bd1db958 596 Gene3D G3DSA:3.40.50.300 266 514 2.2E-54 T 11-10-2018 ATC04_14055 271b78a439b201997f38e785bd1db958 596 Gene3D G3DSA:3.40.50.300 3 237 1.4E-48 T 11-10-2018 ATC04_14055 271b78a439b201997f38e785bd1db958 596 SMART SM00382 29 222 8.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_14055 271b78a439b201997f38e785bd1db958 596 SMART SM00382 311 483 2.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_14055 271b78a439b201997f38e785bd1db958 596 Pfam PF00005 ABC transporter 302 438 8.9E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_14055 271b78a439b201997f38e785bd1db958 596 SUPERFAMILY SSF52540 277 484 1.13E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_14055 271b78a439b201997f38e785bd1db958 596 Pfam PF00005 ABC transporter 21 151 1.6E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_14055 271b78a439b201997f38e785bd1db958 596 Pfam PF16326 ABC transporter C-terminal domain 531 593 6.3E-12 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 ATC04_14055 271b78a439b201997f38e785bd1db958 596 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_14055 271b78a439b201997f38e785bd1db958 596 SUPERFAMILY SSF52540 8 204 7.32E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08695 8249bf93caf4aa670cc9b2e2e026d302 115 Pfam PF04993 TfoX N-terminal domain 15 105 8.4E-13 T 11-10-2018 IPR007076 TfoX, N-terminal ATC04_08695 8249bf93caf4aa670cc9b2e2e026d302 115 SUPERFAMILY SSF159894 9 106 4.45E-12 T 11-10-2018 ATC04_12360 57bbb70aa34326d40e147e8d3bcf8854 84 SMART SM00530 6 62 6.4E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_12360 57bbb70aa34326d40e147e8d3bcf8854 84 SUPERFAMILY SSF47413 3 70 2.28E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_12360 57bbb70aa34326d40e147e8d3bcf8854 84 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 7 68 6.6E-20 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_12360 57bbb70aa34326d40e147e8d3bcf8854 84 Gene3D G3DSA:1.10.260.40 8 82 1.1E-8 T 11-10-2018 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 PRINTS PR00083 Histidinol dehydrogenase signature 271 290 5.6E-67 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 PRINTS PR00083 Histidinol dehydrogenase signature 45 69 5.6E-67 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 PRINTS PR00083 Histidinol dehydrogenase signature 146 172 5.6E-67 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 PRINTS PR00083 Histidinol dehydrogenase signature 183 209 5.6E-67 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 PRINTS PR00083 Histidinol dehydrogenase signature 249 270 5.6E-67 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 PRINTS PR00083 Histidinol dehydrogenase signature 341 366 5.6E-67 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 PRINTS PR00083 Histidinol dehydrogenase signature 382 400 5.6E-67 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 Pfam PF00815 Histidinol dehydrogenase 32 447 3.9E-150 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 PIRSF PIRSF000099 10 451 6.5E-145 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 Gene3D G3DSA:3.40.50.1980 43 251 1.7E-104 T 11-10-2018 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 249 281 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 15 448 37.663 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 SUPERFAMILY SSF53720 39 447 1.12E-70 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 45 447 2.1E-137 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATC04_07400 28a60ee2cb3b39787b70db79c3549846 454 Gene3D G3DSA:3.40.50.1980 253 370 1.7E-104 T 11-10-2018 ATC04_18270 6094e733aa540b68b950f27291bad6e5 139 Pfam PF03625 Domain of unknown function DUF302 35 103 6.1E-20 T 11-10-2018 IPR005180 Domain of unknown function DUF302 ATC04_18270 6094e733aa540b68b950f27291bad6e5 139 PIRSF PIRSF021774 1 135 1.6E-40 T 11-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 ATC04_18270 6094e733aa540b68b950f27291bad6e5 139 SUPERFAMILY SSF103247 1 133 6.41E-29 T 11-10-2018 IPR035923 TT1751-like domain superfamily ATC04_18270 6094e733aa540b68b950f27291bad6e5 139 Gene3D G3DSA:3.30.310.70 4 133 7.9E-42 T 11-10-2018 IPR035923 TT1751-like domain superfamily ATC04_17835 6094e733aa540b68b950f27291bad6e5 139 Pfam PF03625 Domain of unknown function DUF302 35 103 6.1E-20 T 11-10-2018 IPR005180 Domain of unknown function DUF302 ATC04_17835 6094e733aa540b68b950f27291bad6e5 139 PIRSF PIRSF021774 1 135 1.6E-40 T 11-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 ATC04_17835 6094e733aa540b68b950f27291bad6e5 139 SUPERFAMILY SSF103247 1 133 6.41E-29 T 11-10-2018 IPR035923 TT1751-like domain superfamily ATC04_17835 6094e733aa540b68b950f27291bad6e5 139 Gene3D G3DSA:3.30.310.70 4 133 7.9E-42 T 11-10-2018 IPR035923 TT1751-like domain superfamily ATC04_06140 78644a1c99401edbf96631da32fd8e60 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06140 78644a1c99401edbf96631da32fd8e60 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.1E-57 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06140 78644a1c99401edbf96631da32fd8e60 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 9.1E-49 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 ATC04_06140 78644a1c99401edbf96631da32fd8e60 138 Gene3D G3DSA:3.90.1170.10 1 137 9.0E-51 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 ATC04_06140 78644a1c99401edbf96631da32fd8e60 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.482 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06140 78644a1c99401edbf96631da32fd8e60 138 SUPERFAMILY SSF54686 1 136 7.06E-57 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 ATC04_06140 78644a1c99401edbf96631da32fd8e60 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.1E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06140 78644a1c99401edbf96631da32fd8e60 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.1E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06140 78644a1c99401edbf96631da32fd8e60 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.1E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06140 78644a1c99401edbf96631da32fd8e60 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.1E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06140 78644a1c99401edbf96631da32fd8e60 138 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 257 526 5.6E-73 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 Gene3D G3DSA:3.50.30.10 10 235 2.1E-47 T 11-10-2018 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 Gene3D G3DSA:1.10.274.10 27 148 2.1E-47 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 PIRSF PIRSF000732 3 558 2.3E-143 T 11-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 Pfam PF05524 PEP-utilising enzyme, N-terminal 9 128 1.7E-20 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 SUPERFAMILY SSF51621 255 527 7.07E-80 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 41 551 1.7E-103 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 Gene3D G3DSA:3.20.20.60 253 558 1.1E-91 T 11-10-2018 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 SUPERFAMILY SSF52009 127 238 1.57E-24 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 Pfam PF00391 PEP-utilising enzyme, mobile domain 158 226 2.7E-16 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 288 307 1.1E-18 T 11-10-2018 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 432 447 1.1E-18 T 11-10-2018 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 449 464 1.1E-18 T 11-10-2018 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 486 498 1.1E-18 T 11-10-2018 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 432 450 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 ATC04_16785 51e7e49cd1c6dbce381346e35beb7fc3 563 SUPERFAMILY SSF47831 42 145 1.57E-18 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 ATC04_18000 122c0a763e8026778050f94170796e6a 325 Pfam PF00665 Integrase core domain 137 256 1.1E-23 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_18000 122c0a763e8026778050f94170796e6a 325 Pfam PF13333 Integrase core domain 270 305 1.1E-5 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_18000 122c0a763e8026778050f94170796e6a 325 Gene3D G3DSA:3.30.420.10 132 290 6.5E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_18000 122c0a763e8026778050f94170796e6a 325 Pfam PF13276 HTH-like domain 73 113 1.5E-9 T 11-10-2018 IPR025948 HTH-like domain ATC04_18000 122c0a763e8026778050f94170796e6a 325 SUPERFAMILY SSF53098 131 302 8.5E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_11800 61cf93179972903a7c4a6018c806cf44 184 Hamap MF_01398 ATP synthase subunit b [atpF]. 18 155 12.918 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ATC04_11800 61cf93179972903a7c4a6018c806cf44 184 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 29 173 3.5E-26 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 ATC04_11800 61cf93179972903a7c4a6018c806cf44 184 SUPERFAMILY SSF81573 80 138 3.4E-13 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily ATC04_11800 61cf93179972903a7c4a6018c806cf44 184 Gene3D G3DSA:1.20.5.620 79 139 1.0E-8 T 11-10-2018 ATC04_11800 61cf93179972903a7c4a6018c806cf44 184 Pfam PF00430 ATP synthase B/B' CF(0) 29 153 6.9E-27 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ATC04_16690 8d32cef7668df631e9ea985c23f88224 273 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_16690 8d32cef7668df631e9ea985c23f88224 273 SUPERFAMILY SSF52540 23 240 2.42E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16690 8d32cef7668df631e9ea985c23f88224 273 SMART SM00382 50 229 2.0E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_16690 8d32cef7668df631e9ea985c23f88224 273 Gene3D G3DSA:3.40.50.300 21 254 6.3E-62 T 11-10-2018 ATC04_16690 8d32cef7668df631e9ea985c23f88224 273 Pfam PF00005 ABC transporter 41 179 4.4E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_12225 f4e28f987de31eb09ffa8bcf47273f02 160 SUPERFAMILY SSF103256 2 135 2.22E-39 T 11-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 ATC04_12225 f4e28f987de31eb09ffa8bcf47273f02 160 Pfam PF02577 Bifunctional nuclease 6 128 5.6E-42 T 11-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 ATC04_12225 f4e28f987de31eb09ffa8bcf47273f02 160 Gene3D G3DSA:3.10.690.10 1 137 5.1E-43 T 11-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 ATC04_17215 9b39ed8ab1dbdecd56a039b68ba62512 396 Pfam PF01168 Alanine racemase, N-terminal domain 26 268 5.8E-16 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_17215 9b39ed8ab1dbdecd56a039b68ba62512 396 Gene3D G3DSA:3.20.20.10 28 268 9.4E-50 T 11-10-2018 IPR029066 PLP-binding barrel ATC04_17215 9b39ed8ab1dbdecd56a039b68ba62512 396 SUPERFAMILY SSF51419 26 279 5.07E-22 T 11-10-2018 IPR029066 PLP-binding barrel ATC04_06820 3c21b0fa0e47ad6448ac241ccae87099 226 SUPERFAMILY SSF161098 14 208 4.06E-32 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_06820 3c21b0fa0e47ad6448ac241ccae87099 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 222 4.5E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_06820 3c21b0fa0e47ad6448ac241ccae87099 226 Gene3D G3DSA:1.10.3720.10 5 224 7.4E-37 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_06820 3c21b0fa0e47ad6448ac241ccae87099 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 116 5.1E-15 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ATC04_16270 7b87e5d74d29a3aec96ea90e57c3c927 284 SUPERFAMILY SSF51735 16 276 3.22E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_16270 7b87e5d74d29a3aec96ea90e57c3c927 284 Gene3D G3DSA:3.40.50.720 1 283 2.9E-74 T 11-10-2018 ATC04_16270 7b87e5d74d29a3aec96ea90e57c3c927 284 Pfam PF01370 NAD dependent epimerase/dehydratase family 67 202 7.5E-6 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ATC04_07610 7067edb76e78d27c0d20ec35e6be155b 225 Gene3D G3DSA:3.30.70.1450 141 218 2.4E-6 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ATC04_07610 7067edb76e78d27c0d20ec35e6be155b 225 Gene3D G3DSA:3.40.50.720 1 133 8.0E-32 T 11-10-2018 ATC04_07610 7067edb76e78d27c0d20ec35e6be155b 225 SUPERFAMILY SSF116726 140 215 4.58E-7 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ATC04_07610 7067edb76e78d27c0d20ec35e6be155b 225 Pfam PF02254 TrkA-N domain 4 117 9.2E-25 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ATC04_07610 7067edb76e78d27c0d20ec35e6be155b 225 SUPERFAMILY SSF51735 3 132 4.82E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_16190 c2a7390b63f230d62767b14f0715015b 482 SUPERFAMILY SSF103473 7 466 1.96E-64 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_16190 c2a7390b63f230d62767b14f0715015b 482 Gene3D G3DSA:1.20.1720.10 16 229 1.3E-40 T 11-10-2018 ATC04_16190 c2a7390b63f230d62767b14f0715015b 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 361 381 3.4E-12 T 11-10-2018 ATC04_16190 c2a7390b63f230d62767b14f0715015b 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 3.4E-12 T 11-10-2018 ATC04_16190 c2a7390b63f230d62767b14f0715015b 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 3.4E-12 T 11-10-2018 ATC04_16190 c2a7390b63f230d62767b14f0715015b 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 3.4E-12 T 11-10-2018 ATC04_16190 c2a7390b63f230d62767b14f0715015b 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 304 328 3.4E-12 T 11-10-2018 ATC04_16190 c2a7390b63f230d62767b14f0715015b 482 Pfam PF07690 Major Facilitator Superfamily 20 412 5.2E-54 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_16190 c2a7390b63f230d62767b14f0715015b 482 Gene3D G3DSA:1.20.1250.20 262 476 5.3E-21 T 11-10-2018 ATC04_16190 c2a7390b63f230d62767b14f0715015b 482 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 432 1.2E-95 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ATC04_16705 2c2591c608bd1f4f79d99ca0733f3274 653 Gene3D G3DSA:3.30.300.30 514 652 7.2E-23 T 11-10-2018 ATC04_16705 2c2591c608bd1f4f79d99ca0733f3274 653 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 9 646 1.4E-226 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 ATC04_16705 2c2591c608bd1f4f79d99ca0733f3274 653 SUPERFAMILY SSF56801 14 632 1.2E-147 T 11-10-2018 ATC04_16705 2c2591c608bd1f4f79d99ca0733f3274 653 Pfam PF13193 AMP-binding enzyme C-terminal domain 526 615 2.1E-17 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ATC04_16705 2c2591c608bd1f4f79d99ca0733f3274 653 Pfam PF00501 AMP-binding enzyme 71 517 4.2E-90 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_16705 2c2591c608bd1f4f79d99ca0733f3274 653 Gene3D G3DSA:3.40.50.12780 56 513 6.7E-99 T 11-10-2018 ATC04_16705 2c2591c608bd1f4f79d99ca0733f3274 653 ProSitePatterns PS00455 Putative AMP-binding domain signature. 245 256 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_16705 2c2591c608bd1f4f79d99ca0733f3274 653 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 13 67 2.6E-11 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 ATC04_08300 b337c9fccfad82c58eb3636c1a887967 486 SUPERFAMILY SSF101960 52 483 1.83E-141 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ATC04_08300 b337c9fccfad82c58eb3636c1a887967 486 Pfam PF01458 Uncharacterized protein family (UPF0051) 232 457 5.1E-76 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 ATC04_08300 b337c9fccfad82c58eb3636c1a887967 486 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 30 477 2.0E-219 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 ATC04_03300 5b6c65f3ff6f3d9b6f459ed28f7718b0 316 Gene3D G3DSA:3.40.47.10 2 316 7.4E-94 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_03300 5b6c65f3ff6f3d9b6f459ed28f7718b0 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 225 314 4.0E-25 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ATC04_03300 5b6c65f3ff6f3d9b6f459ed28f7718b0 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 181 5.7E-24 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ATC04_03300 5b6c65f3ff6f3d9b6f459ed28f7718b0 316 SUPERFAMILY SSF53901 5 314 1.32E-55 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_03595 58447143fe7212c6ed6db65f3cbd9b5f 502 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 452 3.0E-153 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ATC04_03595 58447143fe7212c6ed6db65f3cbd9b5f 502 PRINTS PR00175 Sodium/alanine symporter signature 421 441 1.8E-50 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ATC04_03595 58447143fe7212c6ed6db65f3cbd9b5f 502 PRINTS PR00175 Sodium/alanine symporter signature 93 115 1.8E-50 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ATC04_03595 58447143fe7212c6ed6db65f3cbd9b5f 502 PRINTS PR00175 Sodium/alanine symporter signature 215 234 1.8E-50 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ATC04_03595 58447143fe7212c6ed6db65f3cbd9b5f 502 PRINTS PR00175 Sodium/alanine symporter signature 310 328 1.8E-50 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ATC04_03595 58447143fe7212c6ed6db65f3cbd9b5f 502 PRINTS PR00175 Sodium/alanine symporter signature 187 205 1.8E-50 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ATC04_03595 58447143fe7212c6ed6db65f3cbd9b5f 502 PRINTS PR00175 Sodium/alanine symporter signature 362 384 1.8E-50 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ATC04_03595 58447143fe7212c6ed6db65f3cbd9b5f 502 Gene3D G3DSA:1.20.1740.10 61 457 2.8E-9 T 11-10-2018 ATC04_03595 58447143fe7212c6ed6db65f3cbd9b5f 502 Pfam PF01235 Sodium:alanine symporter family 55 456 4.8E-140 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ATC04_11785 c8a93fa90609229eb8d81c8574f938ad 297 Pfam PF00231 ATP synthase 5 295 7.8E-84 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11785 c8a93fa90609229eb8d81c8574f938ad 297 Gene3D G3DSA:3.40.1380.10 61 214 3.0E-86 T 11-10-2018 ATC04_11785 c8a93fa90609229eb8d81c8574f938ad 297 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 2.4E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11785 c8a93fa90609229eb8d81c8574f938ad 297 PRINTS PR00126 ATP synthase gamma subunit signature 242 261 2.4E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11785 c8a93fa90609229eb8d81c8574f938ad 297 PRINTS PR00126 ATP synthase gamma subunit signature 273 294 2.4E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11785 c8a93fa90609229eb8d81c8574f938ad 297 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 2.4E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11785 c8a93fa90609229eb8d81c8574f938ad 297 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 295 32.277 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11785 c8a93fa90609229eb8d81c8574f938ad 297 SUPERFAMILY SSF52943 3 295 3.53E-78 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11785 c8a93fa90609229eb8d81c8574f938ad 297 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 281 294 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_11785 c8a93fa90609229eb8d81c8574f938ad 297 Gene3D G3DSA:1.10.287.80 9 291 3.0E-86 T 11-10-2018 ATC04_11785 c8a93fa90609229eb8d81c8574f938ad 297 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 3 295 6.1E-87 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ATC04_01455 14ac9e6c1e84e6a35f07ef3901a70ddd 267 SUPERFAMILY SSF51735 22 263 1.93E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01455 14ac9e6c1e84e6a35f07ef3901a70ddd 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 162 190 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_01455 14ac9e6c1e84e6a35f07ef3901a70ddd 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 30 262 8.1E-58 T 11-10-2018 ATC04_01455 14ac9e6c1e84e6a35f07ef3901a70ddd 267 Gene3D G3DSA:3.40.50.720 7 263 1.6E-72 T 11-10-2018 ATC04_01455 14ac9e6c1e84e6a35f07ef3901a70ddd 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 230 250 9.4E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01455 14ac9e6c1e84e6a35f07ef3901a70ddd 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 194 9.4E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01455 14ac9e6c1e84e6a35f07ef3901a70ddd 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 25 42 9.4E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01455 14ac9e6c1e84e6a35f07ef3901a70ddd 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 165 9.4E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01455 14ac9e6c1e84e6a35f07ef3901a70ddd 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 9.4E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01455 14ac9e6c1e84e6a35f07ef3901a70ddd 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 213 9.4E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01455 14ac9e6c1e84e6a35f07ef3901a70ddd 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 163 7.8E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01455 14ac9e6c1e84e6a35f07ef3901a70ddd 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 101 112 7.8E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_01455 14ac9e6c1e84e6a35f07ef3901a70ddd 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 194 7.8E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_18070 eccb689d2117787952c0b48f15d69b54 185 Gene3D G3DSA:1.10.10.60 143 185 5.6E-7 T 11-10-2018 ATC04_18070 eccb689d2117787952c0b48f15d69b54 185 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_18070 eccb689d2117787952c0b48f15d69b54 185 Pfam PF02796 Helix-turn-helix domain of resolvase 140 182 1.7E-10 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 ATC04_18070 eccb689d2117787952c0b48f15d69b54 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_18070 eccb689d2117787952c0b48f15d69b54 185 Pfam PF00239 Resolvase, N terminal domain 5 137 5.3E-45 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_18070 eccb689d2117787952c0b48f15d69b54 185 Gene3D G3DSA:3.40.50.1390 4 127 7.0E-48 T 11-10-2018 ATC04_18070 eccb689d2117787952c0b48f15d69b54 185 SMART SM00857 4 138 2.2E-58 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_18070 eccb689d2117787952c0b48f15d69b54 185 SUPERFAMILY SSF53041 5 137 2.75E-45 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ATC04_18070 eccb689d2117787952c0b48f15d69b54 185 SUPERFAMILY SSF46689 140 182 3.05E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 Hamap MF_00600 60 kDa chaperonin [groL]. 1 534 38.398 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 Gene3D G3DSA:1.10.560.10 7 520 1.4E-211 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 PRINTS PR00298 60kDa chaperonin signature 82 109 2.8E-69 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 PRINTS PR00298 60kDa chaperonin signature 394 415 2.8E-69 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 PRINTS PR00298 60kDa chaperonin signature 346 371 2.8E-69 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 PRINTS PR00298 60kDa chaperonin signature 264 287 2.8E-69 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 PRINTS PR00298 60kDa chaperonin signature 26 52 2.8E-69 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 524 2.1E-91 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 3.6E-229 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 SUPERFAMILY SSF52029 181 372 1.11E-76 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 SUPERFAMILY SSF54849 137 196 2.98E-19 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 SUPERFAMILY SSF48592 6 520 3.58E-70 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 Gene3D G3DSA:3.30.260.10 135 406 1.4E-211 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ATC04_06385 18d523de257ac3ca635e5cdbd3ccfd26 534 Gene3D G3DSA:3.50.7.10 188 368 1.4E-211 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily ATC04_09335 e12e132cca7a1881b9d7c7a6fc9d03bc 317 SUPERFAMILY SSF100950 64 316 6.05E-62 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_09335 e12e132cca7a1881b9d7c7a6fc9d03bc 317 Pfam PF04198 Putative sugar-binding domain 62 315 7.4E-61 T 11-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 ATC04_09335 e12e132cca7a1881b9d7c7a6fc9d03bc 317 Gene3D G3DSA:3.40.50.1360 56 316 9.4E-78 T 11-10-2018 ATC04_09335 e12e132cca7a1881b9d7c7a6fc9d03bc 317 Gene3D G3DSA:1.10.10.60 5 53 6.6E-16 T 11-10-2018 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 Pfam PF00330 Aconitase family (aconitate hydratase) 65 565 3.6E-179 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 SUPERFAMILY SSF52016 634 897 1.61E-82 T 11-10-2018 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 Gene3D G3DSA:3.30.499.20 9 368 7.4E-154 T 11-10-2018 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 25 898 0.0 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 SUPERFAMILY SSF53732 5 630 5.36E-221 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 Gene3D G3DSA:3.30.499.10 369 593 1.5E-98 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 Pfam PF00694 Aconitase C-terminal domain 695 824 1.3E-45 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 ProSitePatterns PS00450 Aconitase family signature 1. 430 446 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 Gene3D G3DSA:3.20.19.10 656 900 8.4E-103 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 ProSitePatterns PS01244 Aconitase family signature 2. 496 509 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 Gene3D G3DSA:1.10.1440.20 595 655 4.8E-19 T 11-10-2018 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 PRINTS PR00415 Aconitase family signature 166 174 1.0E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 PRINTS PR00415 Aconitase family signature 275 288 1.0E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 PRINTS PR00415 Aconitase family signature 142 155 1.0E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 PRINTS PR00415 Aconitase family signature 368 382 1.0E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 PRINTS PR00415 Aconitase family signature 496 509 1.0E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 PRINTS PR00415 Aconitase family signature 213 228 1.0E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 PRINTS PR00415 Aconitase family signature 434 445 1.0E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 PRINTS PR00415 Aconitase family signature 199 212 1.0E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_07625 47abf5869f85fe1dd09385d505177f4d 902 PRINTS PR00415 Aconitase family signature 289 302 1.0E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_16300 356f6f7bfb8e1c197dcd1cb8200f9129 225 SUPERFAMILY SSF52172 3 132 4.84E-33 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_16300 356f6f7bfb8e1c197dcd1cb8200f9129 225 SMART SM00421 156 213 5.1E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_16300 356f6f7bfb8e1c197dcd1cb8200f9129 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 4.9E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_16300 356f6f7bfb8e1c197dcd1cb8200f9129 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 4.9E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_16300 356f6f7bfb8e1c197dcd1cb8200f9129 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 4.9E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_16300 356f6f7bfb8e1c197dcd1cb8200f9129 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 212 1.4E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_16300 356f6f7bfb8e1c197dcd1cb8200f9129 225 SUPERFAMILY SSF46894 154 220 9.18E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_16300 356f6f7bfb8e1c197dcd1cb8200f9129 225 Gene3D G3DSA:3.40.50.12740 4 219 4.8E-64 T 11-10-2018 ATC04_16300 356f6f7bfb8e1c197dcd1cb8200f9129 225 Pfam PF00072 Response regulator receiver domain 6 117 9.7E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_16300 356f6f7bfb8e1c197dcd1cb8200f9129 225 SMART SM00448 4 117 8.1E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_04565 ae5b5ed91257ccf826b8e3c428984a15 306 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 297 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ATC04_04565 ae5b5ed91257ccf826b8e3c428984a15 306 SMART SM00342 216 301 6.5E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATC04_04565 ae5b5ed91257ccf826b8e3c428984a15 306 SUPERFAMILY SSF46689 251 303 4.93E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_04565 ae5b5ed91257ccf826b8e3c428984a15 306 Gene3D G3DSA:1.10.10.60 195 306 2.5E-23 T 11-10-2018 ATC04_04565 ae5b5ed91257ccf826b8e3c428984a15 306 Pfam PF12833 Helix-turn-helix domain 222 303 9.4E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATC04_04565 ae5b5ed91257ccf826b8e3c428984a15 306 Pfam PF14525 AraC-binding-like domain 10 184 1.2E-27 T 11-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like ATC04_13025 ae2c3d727af5b432d28294a733f9d963 89 SUPERFAMILY SSF47060 3 89 1.06E-35 T 11-10-2018 IPR009068 S15/NS1, RNA-binding ATC04_13025 ae2c3d727af5b432d28294a733f9d963 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 7 89 5.5E-38 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_13025 ae2c3d727af5b432d28294a733f9d963 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_13025 ae2c3d727af5b432d28294a733f9d963 89 SMART SM01387 8 88 2.3E-52 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_13025 ae2c3d727af5b432d28294a733f9d963 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.018 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_13025 ae2c3d727af5b432d28294a733f9d963 89 Pfam PF00312 Ribosomal protein S15 8 88 3.5E-37 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_13025 ae2c3d727af5b432d28294a733f9d963 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-30 T 11-10-2018 ATC04_13025 ae2c3d727af5b432d28294a733f9d963 89 Gene3D G3DSA:1.10.287.10 2 89 1.6E-34 T 11-10-2018 ATC04_08345 300dbf8c8316986bdad3a88756adc1fd 229 SMART SM00382 29 209 3.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_08345 300dbf8c8316986bdad3a88756adc1fd 229 Pfam PF00005 ABC transporter 22 164 8.2E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_08345 300dbf8c8316986bdad3a88756adc1fd 229 SUPERFAMILY SSF52540 6 217 3.43E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08345 300dbf8c8316986bdad3a88756adc1fd 229 Gene3D G3DSA:3.40.50.300 4 228 1.0E-57 T 11-10-2018 ATC04_08345 300dbf8c8316986bdad3a88756adc1fd 229 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_05090 935fc3d76083bc8577ca69780d3b0ba2 797 Pfam PF00905 Penicillin binding protein transpeptidase domain 392 662 3.0E-23 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ATC04_05090 935fc3d76083bc8577ca69780d3b0ba2 797 Pfam PF00912 Transglycosylase 102 288 8.2E-59 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_05090 935fc3d76083bc8577ca69780d3b0ba2 797 SUPERFAMILY SSF53955 91 312 4.78E-68 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ATC04_05090 935fc3d76083bc8577ca69780d3b0ba2 797 Gene3D G3DSA:1.10.3810.10 95 305 5.4E-73 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_05090 935fc3d76083bc8577ca69780d3b0ba2 797 SUPERFAMILY SSF56601 270 722 3.55E-69 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ATC04_05090 935fc3d76083bc8577ca69780d3b0ba2 797 Gene3D G3DSA:3.40.710.10 313 730 3.3E-74 T 11-10-2018 ATC04_04905 ab11db7e3a1736c924dae1ffd1848455 291 SUPERFAMILY SSF56752 11 275 8.89E-51 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 ATC04_04905 ab11db7e3a1736c924dae1ffd1848455 291 Pfam PF01063 Amino-transferase class IV 36 267 8.7E-39 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 ATC04_04905 ab11db7e3a1736c924dae1ffd1848455 291 Gene3D G3DSA:3.30.470.10 1 120 3.4E-29 T 11-10-2018 ATC04_04905 ab11db7e3a1736c924dae1ffd1848455 291 Gene3D G3DSA:3.20.10.10 124 290 2.6E-54 T 11-10-2018 ATC04_17425 e40216993dfdb60436d27039f65bc629 65 SMART SM00530 4 59 5.6E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_17425 e40216993dfdb60436d27039f65bc629 65 Pfam PF01381 Helix-turn-helix 5 59 4.0E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_17425 e40216993dfdb60436d27039f65bc629 65 Gene3D G3DSA:1.10.260.40 1 64 1.4E-25 T 11-10-2018 ATC04_17425 e40216993dfdb60436d27039f65bc629 65 SUPERFAMILY SSF47413 3 64 1.69E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_14620 7d25a112589be28d9b6bdf76c6d971c0 287 Pfam PF12833 Helix-turn-helix domain 29 102 6.1E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATC04_14620 7d25a112589be28d9b6bdf76c6d971c0 287 Gene3D G3DSA:1.10.10.60 4 104 2.1E-18 T 11-10-2018 ATC04_14620 7d25a112589be28d9b6bdf76c6d971c0 287 SMART SM00871 125 285 1.1E-19 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding ATC04_14620 7d25a112589be28d9b6bdf76c6d971c0 287 SMART SM00342 19 101 1.4E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATC04_14620 7d25a112589be28d9b6bdf76c6d971c0 287 Gene3D G3DSA:3.20.80.10 125 286 2.8E-27 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ATC04_14620 7d25a112589be28d9b6bdf76c6d971c0 287 SUPERFAMILY SSF55136 125 285 1.94E-21 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ATC04_14620 7d25a112589be28d9b6bdf76c6d971c0 287 SUPERFAMILY SSF46689 55 104 7.17E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_14620 7d25a112589be28d9b6bdf76c6d971c0 287 Pfam PF06445 GyrI-like small molecule binding domain 125 284 2.7E-23 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain ATC04_16060 b223420695351a4ad5104839dd6b0006 265 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 13 106 2.0E-11 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 ATC04_16060 b223420695351a4ad5104839dd6b0006 265 SUPERFAMILY SSF51735 8 122 4.17E-16 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_16060 b223420695351a4ad5104839dd6b0006 265 Pfam PF01958 Domain of unknown function DUF108 165 250 1.4E-24 T 11-10-2018 IPR002811 Aspartate dehydrogenase GO:0006742|GO:0016491|GO:0019363|GO:0055114 KEGG: 00760+1.4.1.21 ATC04_16060 b223420695351a4ad5104839dd6b0006 265 Gene3D G3DSA:3.30.360.10 117 238 3.7E-59 T 11-10-2018 ATC04_16060 b223420695351a4ad5104839dd6b0006 265 Gene3D G3DSA:3.40.50.720 9 255 3.7E-59 T 11-10-2018 ATC04_16060 b223420695351a4ad5104839dd6b0006 265 SUPERFAMILY SSF55347 117 233 1.11E-19 T 11-10-2018 ATC04_16060 b223420695351a4ad5104839dd6b0006 265 PIRSF PIRSF005227 5 262 2.1E-63 T 11-10-2018 IPR011182 L-aspartate dehydrogenase GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 ATC04_06000 f73872d247916606155a18c5a114da46 423 SUPERFAMILY SSF55874 325 413 3.68E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_06000 f73872d247916606155a18c5a114da46 423 Gene3D G3DSA:3.30.565.10 321 414 4.2E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_06000 f73872d247916606155a18c5a114da46 423 Pfam PF04024 PspC domain 11 64 3.9E-14 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal ATC04_09960 c9a25bfa470a8757fd2975f7a31255ca 205 Gene3D G3DSA:1.20.120.450 1 121 1.7E-10 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_09960 c9a25bfa470a8757fd2975f7a31255ca 205 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 5 186 1.0E-25 T 11-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type ATC04_09960 c9a25bfa470a8757fd2975f7a31255ca 205 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 6 56 2.0E-11 T 11-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 ATC04_09960 c9a25bfa470a8757fd2975f7a31255ca 205 SUPERFAMILY SSF109854 3 122 1.98E-14 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_13840 56a8d55763e9ba910fa6fb26ae1d2881 288 Gene3D G3DSA:3.30.930.10 4 215 2.5E-53 T 11-10-2018 ATC04_13840 56a8d55763e9ba910fa6fb26ae1d2881 288 SUPERFAMILY SSF50037 236 279 1.83E-5 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal ATC04_13840 56a8d55763e9ba910fa6fb26ae1d2881 288 Pfam PF03099 Biotin/lipoate A/B protein ligase family 37 159 6.5E-14 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ATC04_13840 56a8d55763e9ba910fa6fb26ae1d2881 288 SUPERFAMILY SSF55681 30 199 4.08E-41 T 11-10-2018 ATC04_13840 56a8d55763e9ba910fa6fb26ae1d2881 288 Gene3D G3DSA:2.30.30.100 233 281 1.4E-11 T 11-10-2018 ATC04_13840 56a8d55763e9ba910fa6fb26ae1d2881 288 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 36 279 8.8E-32 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_13840 56a8d55763e9ba910fa6fb26ae1d2881 288 Pfam PF02237 Biotin protein ligase C terminal domain 232 277 2.0E-4 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_00875 7ad332805ef552cdb9a9cd3cadd3db18 383 Pfam PF07995 Glucose / Sorbosone dehydrogenase 74 364 5.8E-65 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase ATC04_00875 7ad332805ef552cdb9a9cd3cadd3db18 383 Gene3D G3DSA:2.120.10.30 46 378 2.3E-111 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ATC04_00875 7ad332805ef552cdb9a9cd3cadd3db18 383 SUPERFAMILY SSF50952 62 364 3.53E-40 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 ATC04_14135 250a282999c6fbece06d3793210e6552 320 Gene3D G3DSA:1.10.8.300 209 316 2.4E-30 T 11-10-2018 ATC04_14135 250a282999c6fbece06d3793210e6552 320 PIRSF PIRSF002849 3 320 1.2E-125 T 11-10-2018 ATC04_14135 250a282999c6fbece06d3793210e6552 320 Gene3D G3DSA:3.40.50.300 29 194 6.7E-43 T 11-10-2018 ATC04_14135 250a282999c6fbece06d3793210e6552 320 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 48 177 1.1E-62 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 ATC04_14135 250a282999c6fbece06d3793210e6552 320 SUPERFAMILY SSF52540 27 292 3.06E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03675 8760ecbfb1dad129e7853ac88e94d473 183 Pfam PF02566 OsmC-like protein 71 175 4.5E-18 T 11-10-2018 IPR003718 OsmC/Ohr family ATC04_03675 8760ecbfb1dad129e7853ac88e94d473 183 Gene3D G3DSA:3.30.300.20 28 182 3.2E-40 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ATC04_03675 8760ecbfb1dad129e7853ac88e94d473 183 SUPERFAMILY SSF82784 28 177 1.31E-37 T 11-10-2018 IPR036102 OsmC/Ohr superfamily ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 SUPERFAMILY SSF52156 735 864 2.88E-34 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 ProSitePatterns PS01176 Initiation factor 2 signature. 909 931 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 Gene3D G3DSA:3.40.50.300 448 626 2.3E-70 T 11-10-2018 ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 Pfam PF00009 Elongation factor Tu GTP binding domain 455 615 3.6E-35 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 SUPERFAMILY SSF50447 858 956 9.15E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 SUPERFAMILY SSF52540 447 627 2.5E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 Gene3D G3DSA:2.40.30.10 859 957 1.3E-29 T 11-10-2018 ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 956 16.74 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 361 956 1.8E-233 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 Pfam PF11987 Translation-initiation factor 2 742 847 1.4E-32 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 369 416 7.1E-8 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 5 50 2.0E-12 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 SUPERFAMILY SSF50447 627 710 7.07E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 Gene3D G3DSA:3.40.50.10050 750 858 4.2E-34 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 454 614 6.2E-30 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 PRINTS PR00315 GTP-binding elongation factor signature 523 534 6.1E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 PRINTS PR00315 GTP-binding elongation factor signature 559 568 6.1E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 PRINTS PR00315 GTP-binding elongation factor signature 507 517 6.1E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 PRINTS PR00315 GTP-binding elongation factor signature 455 468 6.1E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 Gene3D G3DSA:2.40.30.10 627 744 6.6E-39 T 11-10-2018 ATC04_13105 931a73edbfc3a2b038110dc57ef93544 957 Gene3D G3DSA:1.10.10.2480 1 64 2.3E-13 T 11-10-2018 ATC04_04205 af2f632cd5ad51d3df508ab491091a21 353 Pfam PF16113 Enoyl-CoA hydratase/isomerase 22 344 8.7E-100 T 11-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 ATC04_04205 af2f632cd5ad51d3df508ab491091a21 353 Gene3D G3DSA:3.90.226.40 7 353 1.1E-103 T 11-10-2018 ATC04_04205 af2f632cd5ad51d3df508ab491091a21 353 SUPERFAMILY SSF52096 12 335 1.3E-59 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_12605 a0ea49076d28e333a860fc9957c8b7de 206 Gene3D G3DSA:3.30.230.40 97 206 1.4E-32 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 ATC04_12605 a0ea49076d28e333a860fc9957c8b7de 206 Gene3D G3DSA:3.30.230.40 2 96 3.7E-33 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 ATC04_12605 a0ea49076d28e333a860fc9957c8b7de 206 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 68 81 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ATC04_12605 a0ea49076d28e333a860fc9957c8b7de 206 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 167 179 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ATC04_12605 a0ea49076d28e333a860fc9957c8b7de 206 SUPERFAMILY SSF54211 9 92 1.77E-29 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_12605 a0ea49076d28e333a860fc9957c8b7de 206 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 9 206 39.025 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ATC04_12605 a0ea49076d28e333a860fc9957c8b7de 206 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 38 185 4.5E-55 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ATC04_12605 a0ea49076d28e333a860fc9957c8b7de 206 SUPERFAMILY SSF54211 94 190 1.0E-26 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_12525 557a8847e54cf7f7a4ed0310953d4246 174 Pfam PF00156 Phosphoribosyl transferase domain 28 161 2.5E-23 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ATC04_12525 557a8847e54cf7f7a4ed0310953d4246 174 SUPERFAMILY SSF53271 19 163 1.18E-27 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ATC04_12525 557a8847e54cf7f7a4ed0310953d4246 174 Gene3D G3DSA:3.40.50.2020 15 171 3.1E-38 T 11-10-2018 ATC04_14805 02d05798228fcb179b303c6f3a2d2225 114 SUPERFAMILY SSF56672 16 102 4.98E-23 T 11-10-2018 ATC04_14805 02d05798228fcb179b303c6f3a2d2225 114 Gene3D G3DSA:3.30.70.270 17 101 4.9E-19 T 11-10-2018 ATC04_14805 02d05798228fcb179b303c6f3a2d2225 114 Gene3D G3DSA:2.30.40.20 25 88 4.9E-19 T 11-10-2018 ATC04_14805 02d05798228fcb179b303c6f3a2d2225 114 Pfam PF00817 impB/mucB/samB family 20 101 3.0E-13 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ATC04_07155 34f3b57057ce9294190331f999d5ab10 169 SUPERFAMILY SSF55961 8 153 2.63E-21 T 11-10-2018 ATC04_07155 34f3b57057ce9294190331f999d5ab10 169 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 17 147 1.6E-8 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like ATC04_07155 34f3b57057ce9294190331f999d5ab10 169 Gene3D G3DSA:3.30.530.20 2 153 3.3E-26 T 11-10-2018 IPR023393 START-like domain superfamily ATC04_12625 71efd0f96ccd5eb05e52be6af5cd7d74 665 Pfam PF13307 Helicase C-terminal domain 485 644 3.0E-34 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ATC04_12625 71efd0f96ccd5eb05e52be6af5cd7d74 665 Gene3D G3DSA:3.40.50.300 21 296 2.9E-42 T 11-10-2018 ATC04_12625 71efd0f96ccd5eb05e52be6af5cd7d74 665 Gene3D G3DSA:3.40.50.300 465 658 1.0E-36 T 11-10-2018 ATC04_12625 71efd0f96ccd5eb05e52be6af5cd7d74 665 SUPERFAMILY SSF52540 36 625 4.76E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12625 71efd0f96ccd5eb05e52be6af5cd7d74 665 SMART SM00491 502 631 8.5E-40 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ATC04_12625 71efd0f96ccd5eb05e52be6af5cd7d74 665 SMART SM00487 18 307 0.0014 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_03480 9a716198f3485c9a5b1eb007b67feb9c 378 Gene3D G3DSA:1.10.540.10 1 117 3.4E-34 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_03480 9a716198f3485c9a5b1eb007b67feb9c 378 Gene3D G3DSA:2.40.110.10 120 231 1.6E-41 T 11-10-2018 ATC04_03480 9a716198f3485c9a5b1eb007b67feb9c 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 375 1.2E-42 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_03480 9a716198f3485c9a5b1eb007b67feb9c 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 114 3.2E-29 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_03480 9a716198f3485c9a5b1eb007b67feb9c 378 SUPERFAMILY SSF47203 225 376 5.64E-50 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_03480 9a716198f3485c9a5b1eb007b67feb9c 378 SUPERFAMILY SSF56645 3 239 4.58E-77 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_03480 9a716198f3485c9a5b1eb007b67feb9c 378 PIRSF PIRSF016578 2 191 5.7E-9 T 11-10-2018 ATC04_03480 9a716198f3485c9a5b1eb007b67feb9c 378 PIRSF PIRSF016578 205 370 1.1E-11 T 11-10-2018 ATC04_03480 9a716198f3485c9a5b1eb007b67feb9c 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 2.5E-25 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_03480 9a716198f3485c9a5b1eb007b67feb9c 378 Gene3D G3DSA:1.20.140.10 232 378 2.3E-47 T 11-10-2018 ATC04_03480 9a716198f3485c9a5b1eb007b67feb9c 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ATC04_13590 13b0eb66fd28e6eeef0a9694b1977e67 419 Pfam PF13416 Bacterial extracellular solute-binding protein 62 355 1.0E-36 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ATC04_13590 13b0eb66fd28e6eeef0a9694b1977e67 419 SUPERFAMILY SSF53850 43 416 4.76E-67 T 11-10-2018 ATC04_13590 13b0eb66fd28e6eeef0a9694b1977e67 419 Gene3D G3DSA:3.40.190.10 38 419 4.6E-72 T 11-10-2018 ATC04_04365 809252b6de3bd6627dec13ce589c9a7d 487 PRINTS PR01036 Tetracycline resistance protein TetB signature 143 167 6.8E-7 T 11-10-2018 ATC04_04365 809252b6de3bd6627dec13ce589c9a7d 487 PRINTS PR01036 Tetracycline resistance protein TetB signature 22 46 6.8E-7 T 11-10-2018 ATC04_04365 809252b6de3bd6627dec13ce589c9a7d 487 PRINTS PR01036 Tetracycline resistance protein TetB signature 113 133 6.8E-7 T 11-10-2018 ATC04_04365 809252b6de3bd6627dec13ce589c9a7d 487 Gene3D G3DSA:1.20.1250.20 268 484 9.8E-22 T 11-10-2018 ATC04_04365 809252b6de3bd6627dec13ce589c9a7d 487 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 20 445 1.4E-84 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ATC04_04365 809252b6de3bd6627dec13ce589c9a7d 487 Pfam PF07690 Major Facilitator Superfamily 23 419 1.4E-57 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_04365 809252b6de3bd6627dec13ce589c9a7d 487 SUPERFAMILY SSF103473 8 484 1.09E-75 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_04365 809252b6de3bd6627dec13ce589c9a7d 487 Gene3D G3DSA:1.20.1720.10 20 222 2.2E-52 T 11-10-2018 ATC04_08530 b48da8fbf11b2d60fe76fe5df287eb98 245 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_08530 b48da8fbf11b2d60fe76fe5df287eb98 245 Pfam PF00005 ABC transporter 20 152 1.3E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_08530 b48da8fbf11b2d60fe76fe5df287eb98 245 Gene3D G3DSA:3.40.50.300 3 245 4.7E-61 T 11-10-2018 ATC04_08530 b48da8fbf11b2d60fe76fe5df287eb98 245 SMART SM00382 28 211 3.8E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_08530 b48da8fbf11b2d60fe76fe5df287eb98 245 SUPERFAMILY SSF52540 3 213 2.66E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09675 c52748c2df49fdbc0a65cd782aec58be 60 Pfam PF05639 Pup-like protein 10 60 2.3E-21 T 11-10-2018 IPR008515 Ubiquitin-like, Pup ATC04_09675 c52748c2df49fdbc0a65cd782aec58be 60 Hamap MF_02106 Prokaryotic ubiquitin-like protein Pup [pup]. 1 60 15.681 T 11-10-2018 IPR008515 Ubiquitin-like, Pup ATC04_09675 c52748c2df49fdbc0a65cd782aec58be 60 TIGRFAM TIGR03687 pupylate_cterm: ubiquitin-like protein Pup 28 60 3.1E-22 T 11-10-2018 IPR008515 Ubiquitin-like, Pup ATC04_02035 be618178d8b780b4fc963cb0aaeab587 329 Pfam PF03601 Conserved hypothetical protein 698 9 307 3.7E-73 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 ATC04_12595 519d4b32dddc3d3f5ff7e136da289f68 245 Pfam PF00977 Histidine biosynthesis protein 9 234 4.9E-65 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 ATC04_12595 519d4b32dddc3d3f5ff7e136da289f68 245 TIGRFAM TIGR01919 hisA-trpF: bifunctional HisA/TrpF protein 7 242 1.0E-110 T 11-10-2018 IPR010188 Bifunctional HisA/TrpF GO:0000105|GO:0000162|GO:0003949|GO:0004640|GO:0005737 KEGG: 00340+5.3.1.16 ATC04_12595 519d4b32dddc3d3f5ff7e136da289f68 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 8 241 32.501 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 ATC04_12595 519d4b32dddc3d3f5ff7e136da289f68 245 Gene3D G3DSA:3.20.20.70 1 245 9.4E-96 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_12595 519d4b32dddc3d3f5ff7e136da289f68 245 SUPERFAMILY SSF51366 8 240 1.02E-64 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ATC04_04945 ec412c9017ccd3b9646b9981081481f4 517 SMART SM00490 258 339 1.3E-24 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_04945 ec412c9017ccd3b9646b9981081481f4 517 Gene3D G3DSA:3.40.50.300 218 407 1.8E-40 T 11-10-2018 ATC04_04945 ec412c9017ccd3b9646b9981081481f4 517 Pfam PF00270 DEAD/DEAH box helicase 27 197 1.3E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATC04_04945 ec412c9017ccd3b9646b9981081481f4 517 SUPERFAMILY SSF52540 148 351 1.69E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_04945 ec412c9017ccd3b9646b9981081481f4 517 SMART SM00487 22 224 2.9E-49 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_04945 ec412c9017ccd3b9646b9981081481f4 517 Pfam PF00271 Helicase conserved C-terminal domain 242 339 4.9E-23 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_04945 ec412c9017ccd3b9646b9981081481f4 517 Gene3D G3DSA:3.40.50.300 1 211 4.1E-69 T 11-10-2018 ATC04_04945 ec412c9017ccd3b9646b9981081481f4 517 SUPERFAMILY SSF52540 3 211 3.2E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11105 1999fee3277dd5b714a48666fab1d0c0 532 SUPERFAMILY SSF51905 1 510 1.77E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_11105 1999fee3277dd5b714a48666fab1d0c0 532 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 8 515 4.9E-156 T 11-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 ATC04_11105 1999fee3277dd5b714a48666fab1d0c0 532 Gene3D G3DSA:3.50.50.60 5 114 2.7E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_11105 1999fee3277dd5b714a48666fab1d0c0 532 Gene3D G3DSA:3.50.50.60 205 323 8.3E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_11105 1999fee3277dd5b714a48666fab1d0c0 532 Pfam PF01593 Flavin containing amine oxidoreductase 15 510 1.7E-28 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 ATC04_12815 343b8d971d97af37b4d5adc59ce293ce 453 Pfam PF00083 Sugar (and other) transporter 27 227 1.4E-23 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_12815 343b8d971d97af37b4d5adc59ce293ce 453 ProSitePatterns PS00217 Sugar transport proteins signature 2. 132 157 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_12815 343b8d971d97af37b4d5adc59ce293ce 453 Gene3D G3DSA:1.20.1250.20 20 443 6.6E-69 T 11-10-2018 ATC04_12815 343b8d971d97af37b4d5adc59ce293ce 453 Pfam PF07690 Major Facilitator Superfamily 254 433 7.1E-12 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_12815 343b8d971d97af37b4d5adc59ce293ce 453 SUPERFAMILY SSF103473 9 430 1.44E-63 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_10620 7e6dece17dd7dd0746a858c29842bdc2 156 Pfam PF01467 Cytidylyltransferase-like 6 133 8.4E-16 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATC04_10620 7e6dece17dd7dd0746a858c29842bdc2 156 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 156 28.687 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ATC04_10620 7e6dece17dd7dd0746a858c29842bdc2 156 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 2.7E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ATC04_10620 7e6dece17dd7dd0746a858c29842bdc2 156 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 2.7E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ATC04_10620 7e6dece17dd7dd0746a858c29842bdc2 156 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 2.7E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ATC04_10620 7e6dece17dd7dd0746a858c29842bdc2 156 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 2.7E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ATC04_10620 7e6dece17dd7dd0746a858c29842bdc2 156 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 2.7E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ATC04_10620 7e6dece17dd7dd0746a858c29842bdc2 156 SUPERFAMILY SSF52374 1 155 1.26E-38 T 11-10-2018 ATC04_10620 7e6dece17dd7dd0746a858c29842bdc2 156 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 1.3E-50 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ATC04_10620 7e6dece17dd7dd0746a858c29842bdc2 156 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 56 6.5E-17 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATC04_10620 7e6dece17dd7dd0746a858c29842bdc2 156 Gene3D G3DSA:3.40.50.620 1 156 7.5E-47 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_07305 443ea1cc3551d830c664b7603d2550ff 330 SUPERFAMILY SSF53335 14 326 5.63E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_07305 443ea1cc3551d830c664b7603d2550ff 330 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 14 326 36.156 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ATC04_07305 443ea1cc3551d830c664b7603d2550ff 330 Gene3D G3DSA:3.40.50.150 14 322 6.1E-95 T 11-10-2018 ATC04_07305 443ea1cc3551d830c664b7603d2550ff 330 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 11 325 1.8E-93 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ATC04_07305 443ea1cc3551d830c664b7603d2550ff 330 Pfam PF01795 MraW methylase family 13 325 5.2E-111 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ATC04_07305 443ea1cc3551d830c664b7603d2550ff 330 Gene3D G3DSA:1.10.150.170 128 233 6.1E-95 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 ATC04_07305 443ea1cc3551d830c664b7603d2550ff 330 SUPERFAMILY SSF81799 130 231 3.53E-33 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 ATC04_07305 443ea1cc3551d830c664b7603d2550ff 330 PIRSF PIRSF004486 9 327 7.4E-99 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 Pfam PF12327 FtsZ family, C-terminal domain 219 313 1.0E-33 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 6 381 38.204 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 SUPERFAMILY SSF55307 202 316 1.81E-42 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 Gene3D G3DSA:3.30.1330.20 218 324 8.8E-38 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 PRINTS PR00423 Cell division protein FtsZ signature 123 144 1.8E-49 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 PRINTS PR00423 Cell division protein FtsZ signature 209 230 1.8E-49 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 PRINTS PR00423 Cell division protein FtsZ signature 95 115 1.8E-49 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 PRINTS PR00423 Cell division protein FtsZ signature 186 208 1.8E-49 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 ProSitePatterns PS01134 FtsZ protein signature 1. 41 75 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 SMART SM00865 204 321 1.6E-54 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 Gene3D G3DSA:3.40.50.1440 1 217 1.3E-79 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 ProSitePatterns PS01135 FtsZ protein signature 2. 94 115 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 SMART SM00864 10 202 1.0E-107 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 319 5.0E-125 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 SUPERFAMILY SSF52490 9 205 5.63E-67 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 ATC04_07360 92467b3f116f21c51dc26deb1f22fc6e 393 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 11 170 2.8E-37 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATC04_05020 25f0df27aa9571d590e32f75ba87ceed 257 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 211 7.4E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_05020 25f0df27aa9571d590e32f75ba87ceed 257 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 227 7.4E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_05020 25f0df27aa9571d590e32f75ba87ceed 257 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 227 239 7.4E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_05020 25f0df27aa9571d590e32f75ba87ceed 257 Gene3D G3DSA:1.25.40.10 5 188 5.5E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_05020 25f0df27aa9571d590e32f75ba87ceed 257 Pfam PF00196 Bacterial regulatory proteins, luxR family 197 250 1.4E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_05020 25f0df27aa9571d590e32f75ba87ceed 257 ProSitePatterns PS00622 LuxR-type HTH domain signature. 211 238 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_05020 25f0df27aa9571d590e32f75ba87ceed 257 SUPERFAMILY SSF46894 185 256 1.22E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_05020 25f0df27aa9571d590e32f75ba87ceed 257 SMART SM00421 194 251 1.5E-24 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_05020 25f0df27aa9571d590e32f75ba87ceed 257 Gene3D G3DSA:1.10.10.10 189 257 5.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_13570 c145043ee16959f23275fea7c030569a 259 SUPERFAMILY SSF46785 3 65 3.64E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_13570 c145043ee16959f23275fea7c030569a 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 ATC04_13570 c145043ee16959f23275fea7c030569a 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ATC04_13570 c145043ee16959f23275fea7c030569a 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ATC04_13570 c145043ee16959f23275fea7c030569a 259 SMART SM01134 72 241 3.1E-53 T 11-10-2018 ATC04_13570 c145043ee16959f23275fea7c030569a 259 Gene3D G3DSA:3.40.50.1360 73 239 5.7E-8 T 11-10-2018 ATC04_13570 c145043ee16959f23275fea7c030569a 259 Gene3D G3DSA:1.10.10.10 1 72 1.3E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_13570 c145043ee16959f23275fea7c030569a 259 SMART SM00420 6 58 1.5E-19 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ATC04_13570 c145043ee16959f23275fea7c030569a 259 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 5.5E-19 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ATC04_13570 c145043ee16959f23275fea7c030569a 259 SUPERFAMILY SSF100950 74 240 5.08E-25 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_13570 c145043ee16959f23275fea7c030569a 259 Pfam PF00455 DeoR C terminal sensor domain 74 239 4.6E-43 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 103 694 1.4E-161 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 Pfam PF02867 Ribonucleotide reductase, barrel domain 176 691 8.9E-141 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 Gene3D G3DSA:1.10.1650.20 294 345 9.2E-30 T 11-10-2018 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 100 171 1.1E-11 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 426 449 8.8E-33 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 465 487 8.8E-33 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 493 516 8.8E-33 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 382 393 8.8E-33 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 251 270 8.8E-33 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 PRINTS PR01183 Ribonucleotide reductase large chain signature 575 602 8.8E-33 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 16 712 0.0 T 11-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 SUPERFAMILY SSF51998 175 696 4.88E-185 T 11-10-2018 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 SUPERFAMILY SSF48168 16 174 6.67E-56 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 564 586 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATC04_08860 7bf779d950f26a89e2cb3b5768dc275c 712 Pfam PF08343 Ribonucleotide reductase N-terminal 16 97 9.1E-29 T 11-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATC04_06950 2aa177db39f2b29eb8be0204f5f93aaa 327 Gene3D G3DSA:3.20.20.70 1 327 4.0E-138 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_06950 2aa177db39f2b29eb8be0204f5f93aaa 327 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 242 254 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ATC04_06950 2aa177db39f2b29eb8be0204f5f93aaa 327 SMART SM01004 3 323 6.2E-218 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ATC04_06950 2aa177db39f2b29eb8be0204f5f93aaa 327 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 322 2.7E-140 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ATC04_06950 2aa177db39f2b29eb8be0204f5f93aaa 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 1.8E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ATC04_06950 2aa177db39f2b29eb8be0204f5f93aaa 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 242 258 1.8E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ATC04_06950 2aa177db39f2b29eb8be0204f5f93aaa 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 191 210 1.8E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ATC04_06950 2aa177db39f2b29eb8be0204f5f93aaa 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 267 282 1.8E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ATC04_06950 2aa177db39f2b29eb8be0204f5f93aaa 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 1.8E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ATC04_06950 2aa177db39f2b29eb8be0204f5f93aaa 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 297 316 1.8E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ATC04_06950 2aa177db39f2b29eb8be0204f5f93aaa 327 PIRSF PIRSF001415 1 326 1.6E-145 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ATC04_06950 2aa177db39f2b29eb8be0204f5f93aaa 327 SUPERFAMILY SSF51569 3 325 1.22E-132 T 11-10-2018 ATC04_15485 95317d8363f64e27f3842653a70fd8a4 404 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 261 371 8.8E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_15485 95317d8363f64e27f3842653a70fd8a4 404 Pfam PF00512 His Kinase A (phospho-acceptor) domain 150 215 3.6E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_15485 95317d8363f64e27f3842653a70fd8a4 404 SMART SM00387 261 373 3.1E-42 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_15485 95317d8363f64e27f3842653a70fd8a4 404 Gene3D G3DSA:1.10.287.130 144 216 1.8E-17 T 11-10-2018 ATC04_15485 95317d8363f64e27f3842653a70fd8a4 404 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 326 3.0E-21 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_15485 95317d8363f64e27f3842653a70fd8a4 404 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 370 3.0E-21 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_15485 95317d8363f64e27f3842653a70fd8a4 404 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 351 3.0E-21 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_15485 95317d8363f64e27f3842653a70fd8a4 404 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 312 3.0E-21 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_15485 95317d8363f64e27f3842653a70fd8a4 404 SUPERFAMILY SSF47384 136 216 1.02E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ATC04_15485 95317d8363f64e27f3842653a70fd8a4 404 SMART SM00388 150 216 3.0E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATC04_15485 95317d8363f64e27f3842653a70fd8a4 404 SUPERFAMILY SSF55874 206 373 1.27E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_15485 95317d8363f64e27f3842653a70fd8a4 404 Gene3D G3DSA:3.30.565.10 222 378 4.3E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_11950 255a3f4e6c0f3049ee4d2493d1c37950 216 Gene3D G3DSA:3.40.50.1110 18 210 1.0E-41 T 11-10-2018 IPR036514 SGNH hydrolase superfamily ATC04_11950 255a3f4e6c0f3049ee4d2493d1c37950 216 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 25 192 3.8E-10 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain ATC04_11950 255a3f4e6c0f3049ee4d2493d1c37950 216 SUPERFAMILY SSF52266 20 200 4.0E-24 T 11-10-2018 ATC04_12305 cc7e8120484fdaf523ca7b76f4b865ff 118 SUPERFAMILY SSF54593 10 112 3.95E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_12305 cc7e8120484fdaf523ca7b76f4b865ff 118 Gene3D G3DSA:3.10.180.10 2 110 8.6E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_11910 026486cadeda752953ff396d0b05858b 134 Gene3D G3DSA:1.10.10.10 1 81 1.6E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_11910 026486cadeda752953ff396d0b05858b 134 SUPERFAMILY SSF46785 4 127 1.61E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_11910 026486cadeda752953ff396d0b05858b 134 Pfam PF01475 Ferric uptake regulator family 5 123 4.4E-31 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ATC04_11910 026486cadeda752953ff396d0b05858b 134 Gene3D G3DSA:3.30.1490.190 82 134 7.5E-22 T 11-10-2018 ATC04_06340 299c443b9009117d26f1603464623b74 191 Gene3D G3DSA:3.40.50.300 5 151 3.5E-31 T 11-10-2018 ATC04_06340 299c443b9009117d26f1603464623b74 191 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 12 134 2.5E-22 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ATC04_06340 299c443b9009117d26f1603464623b74 191 SUPERFAMILY SSF52540 27 128 4.95E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06340 299c443b9009117d26f1603464623b74 191 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 14 135 2.9E-28 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ATC04_07850 13cf8cf6712170d15731adaec39e4766 220 SUPERFAMILY SSF51366 5 214 5.14E-58 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ATC04_07850 13cf8cf6712170d15731adaec39e4766 220 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ATC04_07850 13cf8cf6712170d15731adaec39e4766 220 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 213 2.4E-76 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ATC04_07850 13cf8cf6712170d15731adaec39e4766 220 Gene3D G3DSA:3.20.20.70 2 216 4.6E-73 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_07850 13cf8cf6712170d15731adaec39e4766 220 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ATC04_07850 13cf8cf6712170d15731adaec39e4766 220 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 200 8.3E-73 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ATC04_07850 13cf8cf6712170d15731adaec39e4766 220 PIRSF PIRSF001461 1 220 2.5E-86 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ATC04_12160 8e310dc8befcf933645f337d0fa7a10c 1240 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 89 177 6.1E-9 T 11-10-2018 IPR032030 YscD, cytoplasmic domain ATC04_12160 8e310dc8befcf933645f337d0fa7a10c 1240 Gene3D G3DSA:2.60.200.20 79 189 3.0E-11 T 11-10-2018 ATC04_12160 8e310dc8befcf933645f337d0fa7a10c 1240 Pfam PF01580 FtsK/SpoIIIE family 538 733 6.7E-29 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ATC04_12160 8e310dc8befcf933645f337d0fa7a10c 1240 SUPERFAMILY SSF52540 514 721 3.19E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12160 8e310dc8befcf933645f337d0fa7a10c 1240 Gene3D G3DSA:3.40.50.300 511 767 1.2E-67 T 11-10-2018 ATC04_12160 8e310dc8befcf933645f337d0fa7a10c 1240 SUPERFAMILY SSF49879 80 175 3.52E-9 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ATC04_14160 5c1cc89e8ce7faf645d2e45f9f355c5d 536 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 47 283 2.4E-18 T 11-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 ATC04_14160 5c1cc89e8ce7faf645d2e45f9f355c5d 536 Pfam PF16192 C-terminal four TMM region of protein-O-mannosyltransferase 345 535 6.9E-16 T 11-10-2018 IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain KEGG: 00514+2.4.1.109|KEGG: 00515+2.4.1.109|MetaCyc: PWY-7921|MetaCyc: PWY-7922|MetaCyc: PWY-7979|Reactome: R-HSA-5173105 ATC04_17160 06b9b73789650a27cceedb6b94b62818 229 SUPERFAMILY SSF53335 28 228 8.06E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_17160 06b9b73789650a27cceedb6b94b62818 229 Gene3D G3DSA:3.40.50.150 7 229 3.3E-64 T 11-10-2018 ATC04_17160 06b9b73789650a27cceedb6b94b62818 229 Pfam PF01596 O-methyltransferase 32 213 9.3E-39 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 ATC04_10590 ca81ab803383ec1c8a81c708a25d549a 272 Gene3D G3DSA:1.20.120.1760 24 210 1.8E-25 T 11-10-2018 ATC04_06755 e9881b651eaaa5dbeb63c100c9f6591b 178 Pfam PF13302 Acetyltransferase (GNAT) domain 62 152 1.6E-5 T 11-10-2018 IPR000182 GNAT domain ATC04_06755 e9881b651eaaa5dbeb63c100c9f6591b 178 SUPERFAMILY SSF55729 7 168 6.56E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_06755 e9881b651eaaa5dbeb63c100c9f6591b 178 Gene3D G3DSA:3.40.630.30 5 172 9.3E-17 T 11-10-2018 ATC04_06710 36ef5e1b39580a7b92d6343de297fa36 247 SUPERFAMILY SSF51735 5 245 4.58E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_06710 36ef5e1b39580a7b92d6343de297fa36 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_06710 36ef5e1b39580a7b92d6343de297fa36 247 Gene3D G3DSA:3.40.50.720 4 246 5.9E-76 T 11-10-2018 ATC04_06710 36ef5e1b39580a7b92d6343de297fa36 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_06710 36ef5e1b39580a7b92d6343de297fa36 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.1E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_06710 36ef5e1b39580a7b92d6343de297fa36 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.1E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_06710 36ef5e1b39580a7b92d6343de297fa36 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.1E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_06710 36ef5e1b39580a7b92d6343de297fa36 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.1E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_06710 36ef5e1b39580a7b92d6343de297fa36 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.1E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_06710 36ef5e1b39580a7b92d6343de297fa36 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 7.6E-64 T 11-10-2018 ATC04_06710 36ef5e1b39580a7b92d6343de297fa36 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.6E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_06710 36ef5e1b39580a7b92d6343de297fa36 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.6E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_06710 36ef5e1b39580a7b92d6343de297fa36 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.6E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_14890 0e4569c82fd321826f49dfdc98f624dd 580 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 7.3E-42 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_14890 0e4569c82fd321826f49dfdc98f624dd 580 SUPERFAMILY SSF56059 82 329 2.12E-59 T 11-10-2018 ATC04_14890 0e4569c82fd321826f49dfdc98f624dd 580 SUPERFAMILY SSF51230 506 579 7.72E-15 T 11-10-2018 IPR011053 Single hybrid motif ATC04_14890 0e4569c82fd321826f49dfdc98f624dd 580 Pfam PF00364 Biotin-requiring enzyme 513 577 6.0E-11 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ATC04_14890 0e4569c82fd321826f49dfdc98f624dd 580 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 2.7E-77 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_14890 0e4569c82fd321826f49dfdc98f624dd 580 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 536 553 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_14890 0e4569c82fd321826f49dfdc98f624dd 580 SUPERFAMILY SSF51246 328 445 7.32E-37 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ATC04_14890 0e4569c82fd321826f49dfdc98f624dd 580 Gene3D G3DSA:2.40.50.100 511 579 3.0E-16 T 11-10-2018 ATC04_14890 0e4569c82fd321826f49dfdc98f624dd 580 SUPERFAMILY SSF52440 1 112 3.81E-44 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ATC04_14890 0e4569c82fd321826f49dfdc98f624dd 580 SMART SM00878 334 443 5.5E-57 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_14890 0e4569c82fd321826f49dfdc98f624dd 580 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATC04_14890 0e4569c82fd321826f49dfdc98f624dd 580 Gene3D G3DSA:3.30.470.130 1 449 2.9E-178 T 11-10-2018 ATC04_14890 0e4569c82fd321826f49dfdc98f624dd 580 Pfam PF02785 Biotin carboxylase C-terminal domain 334 443 7.1E-36 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATC04_05145 eea71fcb4f75cff149ecfcfa1663d3fc 378 SUPERFAMILY SSF52540 158 304 3.64E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_05145 eea71fcb4f75cff149ecfcfa1663d3fc 378 Gene3D G3DSA:3.40.50.300 157 364 7.4E-13 T 11-10-2018 ATC04_14300 9bf3ca916625717b386c79ba2ff69c64 253 SUPERFAMILY SSF64005 20 247 1.96E-73 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 ATC04_14300 9bf3ca916625717b386c79ba2ff69c64 253 Pfam PF01255 Putative undecaprenyl diphosphate synthase 32 252 7.5E-71 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ATC04_14300 9bf3ca916625717b386c79ba2ff69c64 253 Gene3D G3DSA:3.40.1180.10 8 253 3.0E-85 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 ATC04_14300 9bf3ca916625717b386c79ba2ff69c64 253 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 24 252 6.0E-66 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ATC04_14300 9bf3ca916625717b386c79ba2ff69c64 253 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 24 253 36.635 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ATC04_14300 9bf3ca916625717b386c79ba2ff69c64 253 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 198 215 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 ATC04_16330 43df0fdd7f8d8655448299a1a5ba4630 426 Gene3D G3DSA:1.20.1250.20 1 199 4.1E-42 T 11-10-2018 ATC04_16330 43df0fdd7f8d8655448299a1a5ba4630 426 SUPERFAMILY SSF103473 2 418 2.75E-58 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_16330 43df0fdd7f8d8655448299a1a5ba4630 426 PIRSF PIRSF002808 2 425 5.4E-68 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 ATC04_16330 43df0fdd7f8d8655448299a1a5ba4630 426 Pfam PF07690 Major Facilitator Superfamily 13 369 3.5E-37 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_16330 43df0fdd7f8d8655448299a1a5ba4630 426 Gene3D G3DSA:1.20.1250.20 234 423 4.3E-23 T 11-10-2018 ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 PRINTS PR00143 Citrate synthase signature 380 394 2.1E-51 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 PRINTS PR00143 Citrate synthase signature 242 270 2.1E-51 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 PRINTS PR00143 Citrate synthase signature 220 235 2.1E-51 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 PRINTS PR00143 Citrate synthase signature 298 318 2.1E-51 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 PRINTS PR00143 Citrate synthase signature 166 179 2.1E-51 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 PRINTS PR00143 Citrate synthase signature 360 376 2.1E-51 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 PIRSF PIRSF001369 38 426 2.0E-153 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 Gene3D G3DSA:1.10.580.10 58 412 3.1E-138 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 Gene3D G3DSA:1.10.230.10 269 377 3.1E-138 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 Gene3D G3DSA:2.20.28.60 1 51 1.3E-18 T 11-10-2018 ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 423 6.3E-175 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 ProSitePatterns PS00480 Citrate synthase signature. 305 317 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 Pfam PF00285 Citrate synthase, C-terminal domain 47 412 5.3E-132 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ATC04_06795 8686fb39bf2eb66a2bd2085e06b9e4f4 426 SUPERFAMILY SSF48256 10 424 6.67E-152 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 ATC04_16050 66477936cef165d9b6eaf231c4088953 373 Pfam PF07690 Major Facilitator Superfamily 25 333 2.2E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_16050 66477936cef165d9b6eaf231c4088953 373 Gene3D G3DSA:1.20.1250.20 1 373 1.5E-59 T 11-10-2018 ATC04_16050 66477936cef165d9b6eaf231c4088953 373 SUPERFAMILY SSF103473 2 369 8.76E-60 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_16050 66477936cef165d9b6eaf231c4088953 373 ProSitePatterns PS00217 Sugar transport proteins signature 2. 91 116 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_16050 66477936cef165d9b6eaf231c4088953 373 ProSitePatterns PS00216 Sugar transport proteins signature 1. 49 65 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_17315 cd955b13207d1fdaca3b9208d3c19842 144 SUPERFAMILY SSF54637 13 135 1.65E-28 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_17315 cd955b13207d1fdaca3b9208d3c19842 144 Gene3D G3DSA:3.10.129.10 4 137 2.0E-30 T 11-10-2018 ATC04_17315 cd955b13207d1fdaca3b9208d3c19842 144 Pfam PF03061 Thioesterase superfamily 27 101 9.1E-17 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ATC04_17465 e33cbf2f5eeb84f3dc87daf50ffded42 357 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 4 354 38.678 T 11-10-2018 IPR023763 DNA integrity scanning protein, DisA ATC04_17465 e33cbf2f5eeb84f3dc87daf50ffded42 357 Gene3D G3DSA:1.10.150.20 290 352 5.6E-20 T 11-10-2018 ATC04_17465 e33cbf2f5eeb84f3dc87daf50ffded42 357 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 24 137 3.8E-27 T 11-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal ATC04_17465 e33cbf2f5eeb84f3dc87daf50ffded42 357 Pfam PF12826 Helix-hairpin-helix motif 297 345 2.5E-7 T 11-10-2018 ATC04_17465 e33cbf2f5eeb84f3dc87daf50ffded42 357 SUPERFAMILY SSF143597 17 140 7.59E-27 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily ATC04_17465 e33cbf2f5eeb84f3dc87daf50ffded42 357 Gene3D G3DSA:1.20.1260.110 143 288 6.2E-37 T 11-10-2018 IPR038331 DisA, linker domain superfamily ATC04_17465 e33cbf2f5eeb84f3dc87daf50ffded42 357 Gene3D G3DSA:3.40.1700.10 6 141 8.3E-54 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily ATC04_17465 e33cbf2f5eeb84f3dc87daf50ffded42 357 SUPERFAMILY SSF47781 263 346 4.08E-11 T 11-10-2018 IPR010994 RuvA domain 2-like ATC04_17465 e33cbf2f5eeb84f3dc87daf50ffded42 357 Pfam PF10635 DisA bacterial checkpoint controller linker region 141 274 5.0E-40 T 11-10-2018 IPR018906 DNA integrity scanning, DisA, linker region ATC04_16880 8f0b46801d777ffde83efc00f06aadc1 376 SUPERFAMILY SSF51735 2 373 3.67E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_16880 8f0b46801d777ffde83efc00f06aadc1 376 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 20 361 6.3E-83 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 ATC04_16880 8f0b46801d777ffde83efc00f06aadc1 376 Gene3D G3DSA:3.30.1780.10 9 365 2.7E-77 T 11-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 ATC04_16880 8f0b46801d777ffde83efc00f06aadc1 376 Gene3D G3DSA:3.40.50.720 150 343 2.7E-77 T 11-10-2018 ATC04_16880 8f0b46801d777ffde83efc00f06aadc1 376 PIRSF PIRSF001439 1 370 2.1E-78 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 ATC04_08565 80627e2c04f4a63d5a6234d5c4ba4c42 701 Gene3D G3DSA:3.30.70.1440 122 174 3.7E-12 T 11-10-2018 ATC04_08565 80627e2c04f4a63d5a6234d5c4ba4c42 701 Pfam PF03176 MMPL family 460 672 8.4E-41 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ATC04_08565 80627e2c04f4a63d5a6234d5c4ba4c42 701 Pfam PF03176 MMPL family 54 364 2.4E-44 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ATC04_08565 80627e2c04f4a63d5a6234d5c4ba4c42 701 Gene3D G3DSA:1.20.1640.10 175 324 3.7E-12 T 11-10-2018 ATC04_08565 80627e2c04f4a63d5a6234d5c4ba4c42 701 SUPERFAMILY SSF82866 459 672 3.66E-24 T 11-10-2018 ATC04_08565 80627e2c04f4a63d5a6234d5c4ba4c42 701 SUPERFAMILY SSF82866 119 337 5.36E-28 T 11-10-2018 ATC04_10290 d9ff269b8decac47dd88721cf2760bce 307 SUPERFAMILY SSF55048 127 179 4.05E-11 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding ATC04_10290 d9ff269b8decac47dd88721cf2760bce 307 Pfam PF00698 Acyl transferase domain 5 286 3.8E-19 T 11-10-2018 IPR014043 Acyl transferase ATC04_10290 d9ff269b8decac47dd88721cf2760bce 307 Gene3D G3DSA:3.40.366.10 3 278 6.2E-79 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 ATC04_10290 d9ff269b8decac47dd88721cf2760bce 307 Gene3D G3DSA:3.30.70.250 125 188 6.2E-79 T 11-10-2018 ATC04_10290 d9ff269b8decac47dd88721cf2760bce 307 SUPERFAMILY SSF52151 2 304 7.32E-62 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ATC04_10290 d9ff269b8decac47dd88721cf2760bce 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 286 1.5E-16 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain ATC04_01160 ccb4e29ff074a2928eac5c30eae2ca5d 617 ProSitePatterns PS00211 ABC transporters family signature. 516 530 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_01160 ccb4e29ff074a2928eac5c30eae2ca5d 617 SMART SM00382 404 590 2.0E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_01160 ccb4e29ff074a2928eac5c30eae2ca5d 617 Gene3D G3DSA:1.20.1560.10 16 346 4.9E-71 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_01160 ccb4e29ff074a2928eac5c30eae2ca5d 617 Pfam PF00664 ABC transporter transmembrane region 41 312 3.3E-35 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ATC04_01160 ccb4e29ff074a2928eac5c30eae2ca5d 617 Gene3D G3DSA:3.40.50.300 354 616 2.7E-83 T 11-10-2018 ATC04_01160 ccb4e29ff074a2928eac5c30eae2ca5d 617 SUPERFAMILY SSF90123 27 348 7.85E-67 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_01160 ccb4e29ff074a2928eac5c30eae2ca5d 617 SUPERFAMILY SSF52540 359 615 2.72E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_01160 ccb4e29ff074a2928eac5c30eae2ca5d 617 Pfam PF00005 ABC transporter 395 544 3.6E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_01825 33c3c9e4fecd8e189c71d8d30183cd60 396 PIRSF PIRSF016578 3 391 1.9E-36 T 11-10-2018 ATC04_01825 33c3c9e4fecd8e189c71d8d30183cd60 396 Gene3D G3DSA:2.40.110.10 126 221 1.1E-23 T 11-10-2018 ATC04_01825 33c3c9e4fecd8e189c71d8d30183cd60 396 SUPERFAMILY SSF56645 13 221 9.56E-44 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_01825 33c3c9e4fecd8e189c71d8d30183cd60 396 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 238 371 1.5E-13 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ATC04_01825 33c3c9e4fecd8e189c71d8d30183cd60 396 Gene3D G3DSA:1.10.540.10 17 124 7.0E-24 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_01825 33c3c9e4fecd8e189c71d8d30183cd60 396 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 121 3.8E-8 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_01825 33c3c9e4fecd8e189c71d8d30183cd60 396 SUPERFAMILY SSF47203 234 375 4.19E-16 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_01825 33c3c9e4fecd8e189c71d8d30183cd60 396 Gene3D G3DSA:1.20.140.10 222 394 7.3E-46 T 11-10-2018 ATC04_10625 0917af0bb563a7906781dc48a775bc07 402 Gene3D G3DSA:3.40.640.10 55 291 8.7E-132 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_10625 0917af0bb563a7906781dc48a775bc07 402 SUPERFAMILY SSF53383 26 396 3.03E-99 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_10625 0917af0bb563a7906781dc48a775bc07 402 Gene3D G3DSA:3.90.1150.10 27 389 8.7E-132 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_10625 0917af0bb563a7906781dc48a775bc07 402 Pfam PF00155 Aminotransferase class I and II 41 394 1.1E-59 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATC04_07025 420254a20807fc466a1c95d296590b65 371 SUPERFAMILY SSF50156 175 264 8.01E-6 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 ATC04_07025 420254a20807fc466a1c95d296590b65 371 Gene3D G3DSA:3.30.230.10 207 361 9.0E-26 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATC04_07025 420254a20807fc466a1c95d296590b65 371 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 252 356 5.0E-11 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 ATC04_07025 420254a20807fc466a1c95d296590b65 371 SUPERFAMILY SSF54211 245 355 7.59E-22 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_07025 420254a20807fc466a1c95d296590b65 371 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 332 3.4E-7 T 11-10-2018 ATC04_07025 420254a20807fc466a1c95d296590b65 371 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 17 36 3.4E-7 T 11-10-2018 ATC04_07025 420254a20807fc466a1c95d296590b65 371 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 291 310 3.4E-7 T 11-10-2018 ATC04_01290 9e78d4ec1a9d04bd7bac0bb05a210587 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 7.0E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01290 9e78d4ec1a9d04bd7bac0bb05a210587 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 7.0E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01290 9e78d4ec1a9d04bd7bac0bb05a210587 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 6.0E-17 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01290 9e78d4ec1a9d04bd7bac0bb05a210587 195 Pfam PF08362 YcdC-like protein, C-terminal region 61 114 1.7E-4 T 11-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 ATC04_01290 9e78d4ec1a9d04bd7bac0bb05a210587 195 SUPERFAMILY SSF48498 81 194 3.07E-15 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_01290 9e78d4ec1a9d04bd7bac0bb05a210587 195 Gene3D G3DSA:1.10.357.10 51 194 7.1E-33 T 11-10-2018 ATC04_01290 9e78d4ec1a9d04bd7bac0bb05a210587 195 Gene3D G3DSA:1.10.10.60 2 49 5.9E-18 T 11-10-2018 ATC04_01290 9e78d4ec1a9d04bd7bac0bb05a210587 195 SUPERFAMILY SSF46689 6 85 3.49E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_01290 9e78d4ec1a9d04bd7bac0bb05a210587 195 Pfam PF08359 YsiA-like protein, C-terminal region 132 191 2.7E-4 T 11-10-2018 IPR013570 Transcription regulator YsiA, C-terminal ATC04_09925 d06f76284d9444b0a877617632283dcf 657 Gene3D G3DSA:3.40.50.150 163 488 7.9E-83 T 11-10-2018 ATC04_09925 d06f76284d9444b0a877617632283dcf 657 Pfam PF02384 N-6 DNA Methylase 161 472 3.1E-46 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 ATC04_09925 d06f76284d9444b0a877617632283dcf 657 Pfam PF12161 HsdM N-terminal domain 12 147 1.0E-17 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain ATC04_09925 d06f76284d9444b0a877617632283dcf 657 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 215 229 1.2E-7 T 11-10-2018 ATC04_09925 d06f76284d9444b0a877617632283dcf 657 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 184 200 1.2E-7 T 11-10-2018 ATC04_09925 d06f76284d9444b0a877617632283dcf 657 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 296 308 1.2E-7 T 11-10-2018 ATC04_09925 d06f76284d9444b0a877617632283dcf 657 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 299 305 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ATC04_09925 d06f76284d9444b0a877617632283dcf 657 SUPERFAMILY SSF53335 11 654 4.62E-106 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_14715 d1ef82a96e7bc732bd21fa34e015942f 151 Gene3D G3DSA:3.40.190.10 23 150 1.1E-14 T 11-10-2018 ATC04_14715 d1ef82a96e7bc732bd21fa34e015942f 151 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 118 9.8E-10 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ATC04_14715 d1ef82a96e7bc732bd21fa34e015942f 151 SUPERFAMILY SSF53850 22 118 3.8E-11 T 11-10-2018 ATC04_01900 4495f913f3a436c0768de06bc98d6d4d 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 296 1.6E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_01900 4495f913f3a436c0768de06bc98d6d4d 307 Gene3D G3DSA:1.10.3720.10 69 307 1.2E-49 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_01900 4495f913f3a436c0768de06bc98d6d4d 307 SUPERFAMILY SSF161098 72 297 4.32E-45 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_06200 a812e843eae8a57dbe47eaebbc3630e4 123 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 9 123 9.8E-48 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06200 a812e843eae8a57dbe47eaebbc3630e4 123 Gene3D G3DSA:3.30.420.100 8 122 1.5E-38 T 11-10-2018 ATC04_06200 a812e843eae8a57dbe47eaebbc3630e4 123 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 9 123 26.956 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06200 a812e843eae8a57dbe47eaebbc3630e4 123 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 10 123 1.5E-38 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06200 a812e843eae8a57dbe47eaebbc3630e4 123 SUPERFAMILY SSF53137 10 121 3.92E-47 T 11-10-2018 ATC04_03495 dc4fbca37511b810633d8b545139ee35 343 Pfam PF03601 Conserved hypothetical protein 698 24 322 8.6E-72 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 ATC04_04050 9dfbfdfe43e4584ec8895e2effd358e7 343 Gene3D G3DSA:3.90.180.10 8 332 4.7E-89 T 11-10-2018 ATC04_04050 9dfbfdfe43e4584ec8895e2effd358e7 343 Gene3D G3DSA:3.40.50.720 158 305 4.7E-89 T 11-10-2018 ATC04_04050 9dfbfdfe43e4584ec8895e2effd358e7 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 56 70 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ATC04_04050 9dfbfdfe43e4584ec8895e2effd358e7 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 125 1.6E-22 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATC04_04050 9dfbfdfe43e4584ec8895e2effd358e7 343 SUPERFAMILY SSF51735 146 306 1.56E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_04050 9dfbfdfe43e4584ec8895e2effd358e7 343 Pfam PF00107 Zinc-binding dehydrogenase 178 288 8.9E-17 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATC04_04050 9dfbfdfe43e4584ec8895e2effd358e7 343 SUPERFAMILY SSF50129 1 166 2.28E-43 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_06235 83aa86303f74d872e4311dc9e737640b 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 25.604 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ATC04_06235 83aa86303f74d872e4311dc9e737640b 73 SUPERFAMILY SSF50249 4 72 8.57E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_06235 83aa86303f74d872e4311dc9e737640b 73 SMART SM00316 5 73 0.0027 T 11-10-2018 IPR022967 RNA-binding domain, S1 ATC04_06235 83aa86303f74d872e4311dc9e737640b 73 Gene3D G3DSA:2.40.50.140 1 73 1.7E-37 T 11-10-2018 ATC04_06235 83aa86303f74d872e4311dc9e737640b 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 72 1.4E-36 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ATC04_06235 83aa86303f74d872e4311dc9e737640b 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 71 9.0E-29 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 ATC04_04700 bac17621d1d944e80c261b5fcfc4096e 379 Pfam PF00005 ABC transporter 35 174 2.9E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_04700 bac17621d1d944e80c261b5fcfc4096e 379 Gene3D G3DSA:2.40.50.140 252 292 1.1E-9 T 11-10-2018 ATC04_04700 bac17621d1d944e80c261b5fcfc4096e 379 Pfam PF08402 TOBE domain 290 362 1.1E-14 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 ATC04_04700 bac17621d1d944e80c261b5fcfc4096e 379 SMART SM00382 43 224 5.7E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04700 bac17621d1d944e80c261b5fcfc4096e 379 SUPERFAMILY SSF52540 19 256 2.05E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_04700 bac17621d1d944e80c261b5fcfc4096e 379 Gene3D G3DSA:3.40.50.300 12 251 1.2E-73 T 11-10-2018 ATC04_04700 bac17621d1d944e80c261b5fcfc4096e 379 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 49 362 3.2E-113 T 11-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 ATC04_04700 bac17621d1d944e80c261b5fcfc4096e 379 SUPERFAMILY SSF50331 250 362 9.72E-17 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ATC04_04700 bac17621d1d944e80c261b5fcfc4096e 379 Gene3D G3DSA:2.40.50.100 293 356 1.1E-9 T 11-10-2018 ATC04_04700 bac17621d1d944e80c261b5fcfc4096e 379 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_04500 01712ebaaf5411149af47979537144fa 469 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 466 4.3E-200 T 11-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ATC04_04500 01712ebaaf5411149af47979537144fa 469 Pfam PF03315 Serine dehydratase beta chain 4 160 5.4E-54 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ATC04_04500 01712ebaaf5411149af47979537144fa 469 Pfam PF03313 Serine dehydratase alpha chain 193 463 5.7E-99 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit ATC04_04500 01712ebaaf5411149af47979537144fa 469 SUPERFAMILY SSF143548 17 160 1.02E-38 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ATC04_04500 01712ebaaf5411149af47979537144fa 469 Gene3D G3DSA:3.30.1330.90 11 164 4.1E-48 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ATC04_02180 9492abd8e1243da74b4623bf415deb9f 287 SUPERFAMILY SSF49879 152 248 2.51E-6 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ATC04_14380 de6978805e0d147024c45c382b6589ec 503 Pfam PF00082 Subtilase family 174 369 3.6E-33 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATC04_14380 de6978805e0d147024c45c382b6589ec 503 Pfam PF00082 Subtilase family 64 139 5.9E-7 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATC04_14380 de6978805e0d147024c45c382b6589ec 503 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 319 329 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site ATC04_14380 de6978805e0d147024c45c382b6589ec 503 PRINTS PR00723 Subtilisin serine protease family (S8) signature 64 83 1.8E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ATC04_14380 de6978805e0d147024c45c382b6589ec 503 PRINTS PR00723 Subtilisin serine protease family (S8) signature 318 334 1.8E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ATC04_14380 de6978805e0d147024c45c382b6589ec 503 PRINTS PR00723 Subtilisin serine protease family (S8) signature 107 120 1.8E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ATC04_14380 de6978805e0d147024c45c382b6589ec 503 SUPERFAMILY SSF52743 47 379 1.57E-73 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ATC04_14380 de6978805e0d147024c45c382b6589ec 503 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 69 80 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site ATC04_07390 e6518ac85584ee3d6466bedf4f679c8c 311 Gene3D G3DSA:3.10.290.10 4 71 1.5E-14 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ATC04_07390 e6518ac85584ee3d6466bedf4f679c8c 311 SMART SM00363 17 84 6.4E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_07390 e6518ac85584ee3d6466bedf4f679c8c 311 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_07390 e6518ac85584ee3d6466bedf4f679c8c 311 Gene3D G3DSA:3.30.2350.10 83 310 4.9E-67 T 11-10-2018 ATC04_07390 e6518ac85584ee3d6466bedf4f679c8c 311 SUPERFAMILY SSF55120 80 307 2.72E-71 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_07390 e6518ac85584ee3d6466bedf4f679c8c 311 Pfam PF01479 S4 domain 18 61 2.2E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_07390 e6518ac85584ee3d6466bedf4f679c8c 311 SUPERFAMILY SSF55174 17 67 9.13E-9 T 11-10-2018 ATC04_07390 e6518ac85584ee3d6466bedf4f679c8c 311 Pfam PF00849 RNA pseudouridylate synthase 91 245 1.6E-33 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_07390 e6518ac85584ee3d6466bedf4f679c8c 311 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 306 3.2E-89 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_08825 9c2e0d520e8ee3e33e928bf2a8ad76be 356 SUPERFAMILY SSF53686 24 336 7.46E-71 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATC04_08825 9c2e0d520e8ee3e33e928bf2a8ad76be 356 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 316 2.2E-51 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ATC04_08825 9c2e0d520e8ee3e33e928bf2a8ad76be 356 Gene3D G3DSA:3.40.50.1100 32 323 2.2E-70 T 11-10-2018 ATC04_08825 9c2e0d520e8ee3e33e928bf2a8ad76be 356 Gene3D G3DSA:3.40.50.1100 51 157 2.2E-70 T 11-10-2018 ATC04_00340 25adfd0a50793242258938e44640a0e2 69 Gene3D G3DSA:1.10.260.40 2 67 5.1E-9 T 11-10-2018 ATC04_00340 25adfd0a50793242258938e44640a0e2 69 SUPERFAMILY SSF47413 4 67 8.0E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_00340 25adfd0a50793242258938e44640a0e2 69 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 9 67 5.6E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_00340 25adfd0a50793242258938e44640a0e2 69 SMART SM00530 9 65 3.2E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_03135 8815126b74297ee73189d8117ee06413 773 SUPERFAMILY SSF50692 646 763 3.16E-18 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ATC04_03135 8815126b74297ee73189d8117ee06413 773 SUPERFAMILY SSF53706 58 636 1.7E-132 T 11-10-2018 ATC04_03135 8815126b74297ee73189d8117ee06413 773 Gene3D G3DSA:2.40.40.20 649 762 3.4E-5 T 11-10-2018 ATC04_03135 8815126b74297ee73189d8117ee06413 773 Gene3D G3DSA:3.40.50.740 134 502 3.1E-67 T 11-10-2018 ATC04_03135 8815126b74297ee73189d8117ee06413 773 Pfam PF00384 Molybdopterin oxidoreductase 122 493 2.0E-26 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_03135 8815126b74297ee73189d8117ee06413 773 PIRSF PIRSF000144 5 767 0.0 T 11-10-2018 ATC04_03135 8815126b74297ee73189d8117ee06413 773 Gene3D G3DSA:3.40.228.10 197 419 3.1E-67 T 11-10-2018 ATC04_03135 8815126b74297ee73189d8117ee06413 773 Pfam PF01568 Molydopterin dinucleotide binding domain 650 756 1.1E-12 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ATC04_03135 8815126b74297ee73189d8117ee06413 773 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 24 760 6.1E-269 T 11-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 ATC04_12220 794519a68a4f6b0ba8e56067bc6c1780 196 SMART SM00422 39 111 2.2E-20 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_12220 794519a68a4f6b0ba8e56067bc6c1780 196 Gene3D G3DSA:1.10.1660.10 39 121 6.7E-15 T 11-10-2018 ATC04_12220 794519a68a4f6b0ba8e56067bc6c1780 196 Pfam PF13411 MerR HTH family regulatory protein 44 107 9.0E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_12220 794519a68a4f6b0ba8e56067bc6c1780 196 SUPERFAMILY SSF46955 43 127 2.06E-15 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_04120 492217aa2f06f8b7ebb26bdf82d13558 318 Gene3D G3DSA:3.40.190.10 170 273 4.7E-33 T 11-10-2018 ATC04_04120 492217aa2f06f8b7ebb26bdf82d13558 318 SUPERFAMILY SSF53850 90 297 2.02E-29 T 11-10-2018 ATC04_04120 492217aa2f06f8b7ebb26bdf82d13558 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.9E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_04120 492217aa2f06f8b7ebb26bdf82d13558 318 Gene3D G3DSA:1.10.10.10 1 90 4.2E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_04120 492217aa2f06f8b7ebb26bdf82d13558 318 Gene3D G3DSA:3.40.190.10 92 287 4.7E-33 T 11-10-2018 ATC04_04120 492217aa2f06f8b7ebb26bdf82d13558 318 SUPERFAMILY SSF46785 1 112 7.45E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_04120 492217aa2f06f8b7ebb26bdf82d13558 318 Pfam PF03466 LysR substrate binding domain 90 298 5.2E-34 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_15970 f06b0d3a6f6b7d1f72cc774631726a47 318 Pfam PF08279 HTH domain 6 61 2.7E-16 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 ATC04_15970 f06b0d3a6f6b7d1f72cc774631726a47 318 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 ATC04_15970 f06b0d3a6f6b7d1f72cc774631726a47 318 Pfam PF13280 WYL domain 146 305 6.3E-24 T 11-10-2018 IPR026881 WYL domain ATC04_15970 f06b0d3a6f6b7d1f72cc774631726a47 318 Gene3D G3DSA:1.10.10.10 1 64 4.7E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_15970 f06b0d3a6f6b7d1f72cc774631726a47 318 SUPERFAMILY SSF46785 1 60 7.39E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_04680 380a258d7e02eb70493f73e5b97f1ff0 459 SUPERFAMILY SSF53383 16 454 4.95E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_04680 380a258d7e02eb70493f73e5b97f1ff0 459 Gene3D G3DSA:3.90.1150.10 14 452 1.9E-146 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_04680 380a258d7e02eb70493f73e5b97f1ff0 459 Gene3D G3DSA:3.40.640.10 68 344 1.9E-146 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_04680 380a258d7e02eb70493f73e5b97f1ff0 459 Pfam PF00202 Aminotransferase class-III 35 451 5.8E-96 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_04680 380a258d7e02eb70493f73e5b97f1ff0 459 PIRSF PIRSF000521 32 454 4.0E-23 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_14895 9c467be7d52f20d6c93cadc1dabdcd19 231 Pfam PF07729 FCD domain 93 211 1.2E-15 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_14895 9c467be7d52f20d6c93cadc1dabdcd19 231 Gene3D G3DSA:1.10.10.10 23 83 4.8E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_14895 9c467be7d52f20d6c93cadc1dabdcd19 231 SUPERFAMILY SSF46785 23 102 3.97E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_14895 9c467be7d52f20d6c93cadc1dabdcd19 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 83 2.1E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_14895 9c467be7d52f20d6c93cadc1dabdcd19 231 SMART SM00895 93 213 1.3E-12 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_14895 9c467be7d52f20d6c93cadc1dabdcd19 231 SMART SM00345 25 83 6.2E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_14895 9c467be7d52f20d6c93cadc1dabdcd19 231 Gene3D G3DSA:1.20.120.530 86 228 2.1E-27 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_14895 9c467be7d52f20d6c93cadc1dabdcd19 231 SUPERFAMILY SSF48008 89 222 5.49E-23 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 Gene3D G3DSA:3.40.50.880 151 383 1.6E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 PRINTS PR00097 Anthranilate synthase component II signature 261 272 7.8E-5 T 11-10-2018 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 PRINTS PR00097 Anthranilate synthase component II signature 355 368 7.8E-5 T 11-10-2018 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 PRINTS PR00097 Anthranilate synthase component II signature 233 242 7.8E-5 T 11-10-2018 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 SUPERFAMILY SSF52021 8 143 2.09E-54 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 Gene3D G3DSA:3.50.30.20 7 150 1.9E-56 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 SUPERFAMILY SSF52317 177 381 4.14E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 9 136 1.7E-51 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 278 295 3.4E-29 T 11-10-2018 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 261 277 3.4E-29 T 11-10-2018 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 230 244 3.4E-29 T 11-10-2018 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 191 205 3.4E-29 T 11-10-2018 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 303 314 3.4E-29 T 11-10-2018 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 SMART SM01097 7 137 3.2E-85 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 PRINTS PR00096 Glutamine amidotransferase superfamily signature 355 368 3.6E-10 T 11-10-2018 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 PRINTS PR00096 Glutamine amidotransferase superfamily signature 261 272 3.6E-10 T 11-10-2018 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 PRINTS PR00096 Glutamine amidotransferase superfamily signature 233 242 3.6E-10 T 11-10-2018 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 9 381 2.2E-134 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 Pfam PF00117 Glutamine amidotransferase class-I 194 378 2.2E-38 T 11-10-2018 IPR017926 Glutamine amidotransferase ATC04_09275 66042a19ab04965a221b96afdbbebf49 389 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 7 384 45.007 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_05545 2ef619e1bcc32053f040338b6f9efdfe 170 SUPERFAMILY SSF54197 12 154 1.02E-23 T 11-10-2018 IPR036265 HIT-like superfamily ATC04_05545 2ef619e1bcc32053f040338b6f9efdfe 170 Gene3D G3DSA:3.30.428.10 3 160 2.2E-25 T 11-10-2018 IPR036265 HIT-like superfamily ATC04_05545 2ef619e1bcc32053f040338b6f9efdfe 170 Pfam PF01230 HIT domain 31 125 2.6E-12 T 11-10-2018 IPR001310 Histidine triad (HIT) protein ATC04_15800 d9d2c17840ac970967ba1cbc7dc3c846 373 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 333 1.7E-13 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_15800 d9d2c17840ac970967ba1cbc7dc3c846 373 Gene3D G3DSA:1.10.3720.10 89 337 1.1E-60 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_15800 d9d2c17840ac970967ba1cbc7dc3c846 373 SUPERFAMILY SSF161098 93 323 1.02E-53 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_10335 9d0edb1d8a0dc63af6903ad293f1ee26 121 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 116 19.146 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 ATC04_10335 9d0edb1d8a0dc63af6903ad293f1ee26 121 SUPERFAMILY SSF52980 11 106 3.62E-16 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ATC04_10335 9d0edb1d8a0dc63af6903ad293f1ee26 121 Pfam PF02021 Uncharacterised protein family UPF0102 12 103 5.2E-25 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 ATC04_10335 9d0edb1d8a0dc63af6903ad293f1ee26 121 Gene3D G3DSA:3.40.1350.10 11 120 5.2E-25 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 ATC04_13895 7ff608681884906c663728233a45b2c8 223 SUPERFAMILY SSF46689 11 84 1.29E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_13895 7ff608681884906c663728233a45b2c8 223 Gene3D G3DSA:1.10.357.10 8 208 6.1E-20 T 11-10-2018 ATC04_13895 7ff608681884906c663728233a45b2c8 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 64 4.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_06850 ef1bc268a2f3dea3dc5c1e2a46064ddc 207 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 179 2.7E-27 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ATC04_06850 ef1bc268a2f3dea3dc5c1e2a46064ddc 207 Gene3D G3DSA:1.10.1740.10 13 92 1.4E-22 T 11-10-2018 ATC04_06850 ef1bc268a2f3dea3dc5c1e2a46064ddc 207 Pfam PF04542 Sigma-70 region 2 25 91 8.8E-19 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_06850 ef1bc268a2f3dea3dc5c1e2a46064ddc 207 Gene3D G3DSA:1.10.10.10 121 183 2.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_06850 ef1bc268a2f3dea3dc5c1e2a46064ddc 207 Pfam PF08281 Sigma-70, region 4 124 175 7.0E-15 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATC04_06850 ef1bc268a2f3dea3dc5c1e2a46064ddc 207 SUPERFAMILY SSF88659 119 179 1.5E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ATC04_06850 ef1bc268a2f3dea3dc5c1e2a46064ddc 207 SUPERFAMILY SSF88946 4 95 9.73E-22 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_15470 af983ed1adab0075e841c7e80771f40e 161 SUPERFAMILY SSF141259 3 66 2.75E-13 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily ATC04_15470 af983ed1adab0075e841c7e80771f40e 161 SMART SM01058 2 112 7.8E-30 T 11-10-2018 IPR003711 CarD-like/TRCF domain ATC04_15470 af983ed1adab0075e841c7e80771f40e 161 Gene3D G3DSA:2.30.30.840 1 60 2.2E-23 T 11-10-2018 ATC04_15470 af983ed1adab0075e841c7e80771f40e 161 Gene3D G3DSA:1.20.58.1290 61 161 1.1E-37 T 11-10-2018 ATC04_15470 af983ed1adab0075e841c7e80771f40e 161 Pfam PF02559 CarD-like/TRCF domain 3 111 4.9E-17 T 11-10-2018 IPR003711 CarD-like/TRCF domain ATC04_08870 f2032eb7d6a1cacb3c929f1e62a99edb 796 Gene3D G3DSA:3.30.1490.20 1 60 1.3E-10 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ATC04_08870 f2032eb7d6a1cacb3c929f1e62a99edb 796 Gene3D G3DSA:3.30.1490.20 61 153 3.3E-32 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ATC04_08870 f2032eb7d6a1cacb3c929f1e62a99edb 796 Pfam PF00391 PEP-utilising enzyme, mobile domain 719 788 9.1E-25 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ATC04_08870 f2032eb7d6a1cacb3c929f1e62a99edb 796 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 54 4.2E-7 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 ATC04_08870 f2032eb7d6a1cacb3c929f1e62a99edb 796 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 64 281 4.8E-64 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 ATC04_08870 f2032eb7d6a1cacb3c929f1e62a99edb 796 Gene3D G3DSA:3.30.470.20 154 287 2.3E-34 T 11-10-2018 ATC04_08870 f2032eb7d6a1cacb3c929f1e62a99edb 796 SUPERFAMILY SSF52009 683 792 5.49E-29 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 ATC04_08870 f2032eb7d6a1cacb3c929f1e62a99edb 796 SUPERFAMILY SSF56059 4 286 1.18E-78 T 11-10-2018 ATC04_08870 f2032eb7d6a1cacb3c929f1e62a99edb 796 Gene3D G3DSA:3.50.30.10 689 795 6.6E-34 T 11-10-2018 ATC04_08035 a5dd865b58bbf7dbbe033fd007311925 196 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 192 26.68 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ATC04_08035 a5dd865b58bbf7dbbe033fd007311925 196 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 1.5E-45 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ATC04_08035 a5dd865b58bbf7dbbe033fd007311925 196 SUPERFAMILY SSF52540 1 193 3.16E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08035 a5dd865b58bbf7dbbe033fd007311925 196 Gene3D G3DSA:3.40.50.300 1 195 3.9E-68 T 11-10-2018 ATC04_08035 a5dd865b58bbf7dbbe033fd007311925 196 Pfam PF01121 Dephospho-CoA kinase 3 179 2.3E-58 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ATC04_01395 feed465a60fba4075149e7bda842a733 251 Gene3D G3DSA:3.40.50.300 3 241 9.6E-54 T 11-10-2018 ATC04_01395 feed465a60fba4075149e7bda842a733 251 Pfam PF00005 ABC transporter 24 169 2.9E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_01395 feed465a60fba4075149e7bda842a733 251 SUPERFAMILY SSF52540 6 227 2.5E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_01395 feed465a60fba4075149e7bda842a733 251 SMART SM00382 32 227 2.7E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_01395 feed465a60fba4075149e7bda842a733 251 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_00540 e1f549e26a4b24bfaee0fd6e10c436b3 605 SUPERFAMILY SSF56112 10 263 7.96E-77 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ATC04_00540 e1f549e26a4b24bfaee0fd6e10c436b3 605 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 ATC04_00540 e1f549e26a4b24bfaee0fd6e10c436b3 605 Pfam PF03793 PASTA domain 448 502 1.8E-9 T 11-10-2018 IPR005543 PASTA domain ATC04_00540 e1f549e26a4b24bfaee0fd6e10c436b3 605 Pfam PF03793 PASTA domain 509 571 2.1E-14 T 11-10-2018 IPR005543 PASTA domain ATC04_00540 e1f549e26a4b24bfaee0fd6e10c436b3 605 Gene3D G3DSA:3.30.10.20 447 503 1.4E-8 T 11-10-2018 ATC04_00540 e1f549e26a4b24bfaee0fd6e10c436b3 605 Gene3D G3DSA:3.30.200.20 1 92 5.4E-29 T 11-10-2018 ATC04_00540 e1f549e26a4b24bfaee0fd6e10c436b3 605 Pfam PF00069 Protein kinase domain 14 262 3.7E-48 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ATC04_00540 e1f549e26a4b24bfaee0fd6e10c436b3 605 Gene3D G3DSA:3.30.10.20 504 574 1.1E-17 T 11-10-2018 ATC04_00540 e1f549e26a4b24bfaee0fd6e10c436b3 605 SMART SM00220 13 269 1.6E-64 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ATC04_00540 e1f549e26a4b24bfaee0fd6e10c436b3 605 SMART SM00740 439 504 6.4E-5 T 11-10-2018 IPR005543 PASTA domain ATC04_00540 e1f549e26a4b24bfaee0fd6e10c436b3 605 SMART SM00740 505 571 8.2E-14 T 11-10-2018 IPR005543 PASTA domain ATC04_00540 e1f549e26a4b24bfaee0fd6e10c436b3 605 Gene3D G3DSA:1.10.510.10 95 276 3.0E-53 T 11-10-2018 ATC04_16240 10316c0efde588c67eaf635cb2ff8fe0 274 Gene3D G3DSA:3.40.1190.20 1 272 1.2E-67 T 11-10-2018 IPR029056 Ribokinase-like ATC04_16240 10316c0efde588c67eaf635cb2ff8fe0 274 SUPERFAMILY SSF53613 13 261 6.08E-57 T 11-10-2018 IPR029056 Ribokinase-like ATC04_16240 10316c0efde588c67eaf635cb2ff8fe0 274 Pfam PF08543 Phosphomethylpyrimidine kinase 22 259 2.4E-61 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 ATC04_13545 d7fc40347d547d7d89d43361fbf2424a 214 Gene3D G3DSA:3.10.180.10 1 150 1.4E-10 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_13545 d7fc40347d547d7d89d43361fbf2424a 214 Pfam PF13468 Glyoxalase-like domain 4 171 8.9E-32 T 11-10-2018 IPR025870 Glyoxalase-like domain ATC04_13545 d7fc40347d547d7d89d43361fbf2424a 214 SUPERFAMILY SSF54593 1 105 3.34E-6 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_01625 d5aa21e5711a96bd46a37b766af89602 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 9 227 33.826 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 ATC04_01625 d5aa21e5711a96bd46a37b766af89602 229 Gene3D G3DSA:3.20.20.70 4 226 5.2E-81 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_01625 d5aa21e5711a96bd46a37b766af89602 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 33 226 1.0E-55 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 ATC04_01625 d5aa21e5711a96bd46a37b766af89602 229 SUPERFAMILY SSF51366 11 223 3.77E-47 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ATC04_00910 4f9278f85788d36b6a9b2fccf7e002f7 596 Gene3D G3DSA:3.50.50.60 152 422 9.7E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00910 4f9278f85788d36b6a9b2fccf7e002f7 596 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 325 349 5.5E-5 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_00910 4f9278f85788d36b6a9b2fccf7e002f7 596 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 164 186 5.5E-5 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_00910 4f9278f85788d36b6a9b2fccf7e002f7 596 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 286 294 5.5E-5 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATC04_00910 4f9278f85788d36b6a9b2fccf7e002f7 596 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 166 394 2.3E-17 T 11-10-2018 ATC04_00910 4f9278f85788d36b6a9b2fccf7e002f7 596 Gene3D G3DSA:3.50.50.60 448 580 3.3E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00910 4f9278f85788d36b6a9b2fccf7e002f7 596 SUPERFAMILY SSF51905 155 567 8.64E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_09475 43c13a0cd908debc98480619644cc4c0 268 Gene3D G3DSA:3.40.1180.10 4 255 1.6E-96 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 ATC04_09475 43c13a0cd908debc98480619644cc4c0 268 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 206 223 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 ATC04_09475 43c13a0cd908debc98480619644cc4c0 268 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 33 261 37.464 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ATC04_09475 43c13a0cd908debc98480619644cc4c0 268 SUPERFAMILY SSF64005 29 255 4.58E-83 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 ATC04_09475 43c13a0cd908debc98480619644cc4c0 268 Pfam PF01255 Putative undecaprenyl diphosphate synthase 40 260 1.5E-74 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ATC04_09475 43c13a0cd908debc98480619644cc4c0 268 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 33 260 4.6E-75 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ATC04_07430 a6f382a9ac5cccfc4c9900560d188cd8 1008 Gene3D G3DSA:1.20.120.330 343 497 1.2E-38 T 11-10-2018 ATC04_07430 a6f382a9ac5cccfc4c9900560d188cd8 1008 Gene3D G3DSA:1.20.120.330 849 1005 2.7E-34 T 11-10-2018 ATC04_07430 a6f382a9ac5cccfc4c9900560d188cd8 1008 SUPERFAMILY SSF81593 851 1004 3.14E-31 T 11-10-2018 ATC04_07430 a6f382a9ac5cccfc4c9900560d188cd8 1008 SUPERFAMILY SSF81301 58 337 2.55E-51 T 11-10-2018 ATC04_07430 a6f382a9ac5cccfc4c9900560d188cd8 1008 Gene3D G3DSA:3.30.460.100 609 845 6.5E-54 T 11-10-2018 ATC04_07430 a6f382a9ac5cccfc4c9900560d188cd8 1008 Gene3D G3DSA:3.30.460.100 86 335 3.4E-56 T 11-10-2018 ATC04_07430 a6f382a9ac5cccfc4c9900560d188cd8 1008 SUPERFAMILY SSF81593 344 496 3.37E-36 T 11-10-2018 ATC04_07430 a6f382a9ac5cccfc4c9900560d188cd8 1008 SUPERFAMILY SSF81301 572 849 7.85E-58 T 11-10-2018 ATC04_07430 a6f382a9ac5cccfc4c9900560d188cd8 1008 Pfam PF08335 GlnD PII-uridylyltransferase 860 1003 2.6E-20 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ATC04_07430 a6f382a9ac5cccfc4c9900560d188cd8 1008 Pfam PF08335 GlnD PII-uridylyltransferase 352 495 3.2E-31 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ATC04_07430 a6f382a9ac5cccfc4c9900560d188cd8 1008 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 75 330 2.7E-39 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 ATC04_07430 a6f382a9ac5cccfc4c9900560d188cd8 1008 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 600 839 1.1E-41 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 ATC04_06435 cbc759eb810d3880fbfa7a1856670be5 268 Pfam PF02104 SURF1 family 20 225 7.8E-14 T 11-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_00255 9a4a84f0847b4fba7989ef921ff4bea0 307 Gene3D G3DSA:1.20.150.30 4 118 6.8E-11 T 11-10-2018 ATC04_00255 9a4a84f0847b4fba7989ef921ff4bea0 307 TIGRFAM TIGR03883 DUF2342_F420: uncharacterized protein, coenzyme F420 biosynthesis associated 5 305 3.4E-67 T 11-10-2018 IPR022454 Conserved hypothetical protein CHP03883, F420 biosynthesis associated ATC04_00255 9a4a84f0847b4fba7989ef921ff4bea0 307 SUPERFAMILY SSF55486 4 305 1.98E-58 T 11-10-2018 ATC04_00255 9a4a84f0847b4fba7989ef921ff4bea0 307 Pfam PF10103 Zincin-like metallopeptidase 5 303 7.7E-60 T 11-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 ATC04_01440 4ebe67ac1cbcdf4ae2b2f02fb47b137c 392 Gene3D G3DSA:2.40.110.10 124 236 9.6E-32 T 11-10-2018 ATC04_01440 4ebe67ac1cbcdf4ae2b2f02fb47b137c 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 220 4.2E-21 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_01440 4ebe67ac1cbcdf4ae2b2f02fb47b137c 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 7.2E-20 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_01440 4ebe67ac1cbcdf4ae2b2f02fb47b137c 392 Gene3D G3DSA:1.10.540.10 2 119 3.4E-24 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_01440 4ebe67ac1cbcdf4ae2b2f02fb47b137c 392 Gene3D G3DSA:1.20.140.10 237 385 1.6E-31 T 11-10-2018 ATC04_01440 4ebe67ac1cbcdf4ae2b2f02fb47b137c 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 119 3.8E-18 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_01440 4ebe67ac1cbcdf4ae2b2f02fb47b137c 392 SUPERFAMILY SSF47203 232 382 1.34E-19 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_01440 4ebe67ac1cbcdf4ae2b2f02fb47b137c 392 SUPERFAMILY SSF56645 2 243 2.36E-65 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_06930 635df72db29be7b98b3d82f06795ef1d 228 Gene3D G3DSA:3.30.70.1100 110 228 8.1E-33 T 11-10-2018 ATC04_06930 635df72db29be7b98b3d82f06795ef1d 228 Pfam PF06778 Chlorite dismutase 32 217 1.3E-60 T 11-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase ATC04_06930 635df72db29be7b98b3d82f06795ef1d 228 SUPERFAMILY SSF54909 11 227 9.92E-65 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_13900 5545eba18ee1138abfb56235457682a6 1166 Gene3D G3DSA:1.20.1640.10 921 1121 4.1E-8 T 11-10-2018 ATC04_13900 5545eba18ee1138abfb56235457682a6 1166 SUPERFAMILY SSF82866 886 1121 4.71E-29 T 11-10-2018 ATC04_13900 5545eba18ee1138abfb56235457682a6 1166 Pfam PF03176 MMPL family 462 786 2.1E-49 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ATC04_13900 5545eba18ee1138abfb56235457682a6 1166 Pfam PF03176 MMPL family 820 1124 6.8E-38 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ATC04_13900 5545eba18ee1138abfb56235457682a6 1166 SUPERFAMILY SSF82866 535 754 8.63E-25 T 11-10-2018 ATC04_10880 789e88531145b34971855bcc858e460f 244 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 90 112 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ATC04_10880 789e88531145b34971855bcc858e460f 244 Pfam PF01066 CDP-alcohol phosphatidyltransferase 44 112 3.9E-9 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ATC04_10880 789e88531145b34971855bcc858e460f 244 Gene3D G3DSA:1.20.120.1760 17 231 3.1E-28 T 11-10-2018 ATC04_09740 4a58a4cf51c03a09ad0c6e37dd866468 318 Pfam PF16868 NMT1-like family 37 315 4.2E-44 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family ATC04_09740 4a58a4cf51c03a09ad0c6e37dd866468 318 Gene3D G3DSA:3.40.190.10 115 253 7.8E-60 T 11-10-2018 ATC04_09740 4a58a4cf51c03a09ad0c6e37dd866468 318 SUPERFAMILY SSF53850 33 315 1.72E-47 T 11-10-2018 ATC04_09740 4a58a4cf51c03a09ad0c6e37dd866468 318 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 10 315 1.1E-50 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family ATC04_09740 4a58a4cf51c03a09ad0c6e37dd866468 318 Gene3D G3DSA:3.40.190.10 37 315 7.8E-60 T 11-10-2018 ATC04_06350 c3c0e0c18c935098be3fb455ffcdb6ef 163 Gene3D G3DSA:3.40.630.30 3 162 1.0E-42 T 11-10-2018 ATC04_06350 c3c0e0c18c935098be3fb455ffcdb6ef 163 SUPERFAMILY SSF55729 1 147 1.69E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_06350 c3c0e0c18c935098be3fb455ffcdb6ef 163 Pfam PF00583 Acetyltransferase (GNAT) family 16 124 4.7E-19 T 11-10-2018 IPR000182 GNAT domain ATC04_06350 c3c0e0c18c935098be3fb455ffcdb6ef 163 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 13 143 1.0E-33 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 SUPERFAMILY SSF56235 39 599 5.21E-154 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 Pfam PF01019 Gamma-glutamyltranspeptidase 60 596 4.2E-156 T 11-10-2018 ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 Gene3D G3DSA:1.10.246.130 287 401 6.3E-30 T 11-10-2018 ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 Gene3D G3DSA:3.60.20.40 415 600 1.2E-59 T 11-10-2018 ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 162 181 3.6E-72 T 11-10-2018 ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 472 487 3.6E-72 T 11-10-2018 ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 415 433 3.6E-72 T 11-10-2018 ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 144 162 3.6E-72 T 11-10-2018 ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 301 320 3.6E-72 T 11-10-2018 ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 439 457 3.6E-72 T 11-10-2018 ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 67 92 3.6E-72 T 11-10-2018 ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 271 287 3.6E-72 T 11-10-2018 ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 496 513 3.6E-72 T 11-10-2018 ATC04_16670 6923ce306ae7ce82d756cb84cbdd6808 607 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 46 592 4.4E-135 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 ATC04_09940 a9923d773da7da73da32249b53db85a1 261 Gene3D G3DSA:3.40.50.300 1 258 3.9E-58 T 11-10-2018 ATC04_09940 a9923d773da7da73da32249b53db85a1 261 SUPERFAMILY SSF52540 4 241 8.58E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09940 a9923d773da7da73da32249b53db85a1 261 Pfam PF00005 ABC transporter 20 171 1.5E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_09940 a9923d773da7da73da32249b53db85a1 261 SMART SM00382 29 230 7.7E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04955 a73ea9cf7d2aff456b27362cb6e3e07c 76 Pfam PF13396 Phospholipase_D-nuclease N-terminal 29 71 2.2E-6 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal ATC04_17025 17e1b49c8295a886ed735f0dd9a3bbac 263 Gene3D G3DSA:3.40.50.300 1 241 2.6E-60 T 11-10-2018 ATC04_17025 17e1b49c8295a886ed735f0dd9a3bbac 263 Pfam PF00005 ABC transporter 26 163 1.6E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_17025 17e1b49c8295a886ed735f0dd9a3bbac 263 SUPERFAMILY SSF52540 10 225 1.09E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_17025 17e1b49c8295a886ed735f0dd9a3bbac 263 SMART SM00382 35 210 1.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_17025 17e1b49c8295a886ed735f0dd9a3bbac 263 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_17010 f4ecc17d7e81a24dcd0feedc832dc75f 213 Pfam PF00588 SpoU rRNA Methylase family 64 200 1.6E-25 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ATC04_17010 f4ecc17d7e81a24dcd0feedc832dc75f 213 Gene3D G3DSA:3.40.1280.10 48 211 5.5E-34 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATC04_17010 f4ecc17d7e81a24dcd0feedc832dc75f 213 SUPERFAMILY SSF75217 51 210 5.04E-39 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ATC04_12825 f777b785a4661943c60dfae60f8aa1c6 585 Pfam PF00890 FAD binding domain 13 553 5.9E-83 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_12825 f777b785a4661943c60dfae60f8aa1c6 585 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 530 545 1.1E-8 T 11-10-2018 ATC04_12825 f777b785a4661943c60dfae60f8aa1c6 585 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 1.1E-8 T 11-10-2018 ATC04_12825 f777b785a4661943c60dfae60f8aa1c6 585 SUPERFAMILY SSF51905 6 571 6.49E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_12825 f777b785a4661943c60dfae60f8aa1c6 585 SUPERFAMILY SSF56425 347 514 8.11E-35 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_11230 5d9cc44452dc1c94b65fdccfb54f12d2 683 Pfam PF00771 FHIPEP family 18 662 1.9E-231 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATC04_11230 5d9cc44452dc1c94b65fdccfb54f12d2 683 PIRSF PIRSF005419 1 680 1.3E-234 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATC04_11230 5d9cc44452dc1c94b65fdccfb54f12d2 683 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 129 152 - T 11-10-2018 IPR025505 FHIPEP conserved site ATC04_11230 5d9cc44452dc1c94b65fdccfb54f12d2 683 Gene3D G3DSA:1.10.8.540 485 575 5.5E-17 T 11-10-2018 ATC04_11230 5d9cc44452dc1c94b65fdccfb54f12d2 683 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 124 140 1.9E-53 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATC04_11230 5d9cc44452dc1c94b65fdccfb54f12d2 683 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 173 190 1.9E-53 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATC04_11230 5d9cc44452dc1c94b65fdccfb54f12d2 683 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 143 161 1.9E-53 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATC04_11230 5d9cc44452dc1c94b65fdccfb54f12d2 683 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 62 81 1.9E-53 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATC04_11230 5d9cc44452dc1c94b65fdccfb54f12d2 683 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 25 38 1.9E-53 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATC04_11230 5d9cc44452dc1c94b65fdccfb54f12d2 683 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 224 238 1.9E-53 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATC04_11230 5d9cc44452dc1c94b65fdccfb54f12d2 683 Gene3D G3DSA:1.10.490.80 576 675 1.1E-10 T 11-10-2018 ATC04_11230 5d9cc44452dc1c94b65fdccfb54f12d2 683 Gene3D G3DSA:3.40.30.60 345 484 7.7E-37 T 11-10-2018 ATC04_04440 82b88da3fd9028de9546eb50c3ba5b15 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 1.8E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04440 82b88da3fd9028de9546eb50c3ba5b15 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 60 76 1.8E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04440 82b88da3fd9028de9546eb50c3ba5b15 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 92 1.8E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04440 82b88da3fd9028de9546eb50c3ba5b15 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 112 1.8E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04440 82b88da3fd9028de9546eb50c3ba5b15 174 Pfam PF12802 MarR family 41 100 1.5E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04440 82b88da3fd9028de9546eb50c3ba5b15 174 SUPERFAMILY SSF46785 5 152 3.55E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_04440 82b88da3fd9028de9546eb50c3ba5b15 174 SMART SM00347 34 137 1.8E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04440 82b88da3fd9028de9546eb50c3ba5b15 174 Gene3D G3DSA:1.10.10.10 8 158 2.4E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_02925 63f8e804076888c8d67bb16ef8a226ad 136 SUPERFAMILY SSF54637 3 116 1.1E-23 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_02925 63f8e804076888c8d67bb16ef8a226ad 136 Pfam PF03061 Thioesterase superfamily 17 88 5.4E-12 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ATC04_02925 63f8e804076888c8d67bb16ef8a226ad 136 Gene3D G3DSA:3.10.129.10 2 121 1.4E-19 T 11-10-2018 ATC04_16700 4c709b8745e652a6dfb77ac0fd737e58 278 Gene3D G3DSA:1.10.3720.10 82 271 6.4E-21 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_16700 4c709b8745e652a6dfb77ac0fd737e58 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 269 6.3E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_16700 4c709b8745e652a6dfb77ac0fd737e58 278 SUPERFAMILY SSF161098 80 263 1.96E-29 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_09010 6513f172c4315e98a86f98b043de759e 453 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 446 7.1E-153 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 ATC04_09010 6513f172c4315e98a86f98b043de759e 453 Gene3D G3DSA:3.40.640.10 66 348 8.0E-148 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_09010 6513f172c4315e98a86f98b043de759e 453 SUPERFAMILY SSF53383 28 449 1.81E-100 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_09010 6513f172c4315e98a86f98b043de759e 453 Gene3D G3DSA:3.90.1150.10 11 438 8.0E-148 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_09010 6513f172c4315e98a86f98b043de759e 453 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_09010 6513f172c4315e98a86f98b043de759e 453 Pfam PF00202 Aminotransferase class-III 27 443 1.8E-106 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_13440 9b776d0ea316249826c54ea232d2c668 255 Pfam PF01061 ABC-2 type transporter 9 218 5.3E-26 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ATC04_13440 9b776d0ea316249826c54ea232d2c668 255 PIRSF PIRSF006648 2 254 9.3E-62 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ATC04_11855 f4dac88045ccf293d16c4b9eb72ef773 429 Pfam PF00742 Homoserine dehydrogenase 138 316 3.1E-67 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ATC04_11855 f4dac88045ccf293d16c4b9eb72ef773 429 Gene3D G3DSA:3.40.50.720 7 338 1.3E-138 T 11-10-2018 ATC04_11855 f4dac88045ccf293d16c4b9eb72ef773 429 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 184 206 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ATC04_11855 f4dac88045ccf293d16c4b9eb72ef773 429 Gene3D G3DSA:3.30.70.260 344 417 1.3E-138 T 11-10-2018 ATC04_11855 f4dac88045ccf293d16c4b9eb72ef773 429 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 13 130 2.6E-19 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 ATC04_11855 f4dac88045ccf293d16c4b9eb72ef773 429 SUPERFAMILY SSF51735 5 159 4.56E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_11855 f4dac88045ccf293d16c4b9eb72ef773 429 Pfam PF01842 ACT domain 349 414 5.0E-12 T 11-10-2018 IPR002912 ACT domain ATC04_11855 f4dac88045ccf293d16c4b9eb72ef773 429 Gene3D G3DSA:3.30.360.10 137 343 1.3E-138 T 11-10-2018 ATC04_11855 f4dac88045ccf293d16c4b9eb72ef773 429 PIRSF PIRSF000098 4 429 5.6E-155 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ATC04_11855 f4dac88045ccf293d16c4b9eb72ef773 429 SUPERFAMILY SSF55347 138 303 4.71E-52 T 11-10-2018 ATC04_11855 f4dac88045ccf293d16c4b9eb72ef773 429 SUPERFAMILY SSF55021 348 421 4.58E-13 T 11-10-2018 ATC04_08260 37aa2d9f25e02aafd7b42ba7f5614ea2 704 SUPERFAMILY SSF52518 11 343 1.95E-94 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_08260 37aa2d9f25e02aafd7b42ba7f5614ea2 704 SMART SM00861 373 553 1.2E-60 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ATC04_08260 37aa2d9f25e02aafd7b42ba7f5614ea2 704 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 16 357 1.5E-129 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATC04_08260 37aa2d9f25e02aafd7b42ba7f5614ea2 704 Gene3D G3DSA:3.40.50.970 354 560 3.5E-73 T 11-10-2018 ATC04_08260 37aa2d9f25e02aafd7b42ba7f5614ea2 704 Gene3D G3DSA:3.40.50.970 3 352 2.0E-105 T 11-10-2018 ATC04_08260 37aa2d9f25e02aafd7b42ba7f5614ea2 704 TIGRFAM TIGR00232 tktlase_bact: transketolase 18 697 2.7E-225 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 ATC04_08260 37aa2d9f25e02aafd7b42ba7f5614ea2 704 SUPERFAMILY SSF52518 360 555 1.74E-63 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_08260 37aa2d9f25e02aafd7b42ba7f5614ea2 704 ProSitePatterns PS00802 Transketolase signature 2. 495 511 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATC04_08260 37aa2d9f25e02aafd7b42ba7f5614ea2 704 Pfam PF02779 Transketolase, pyrimidine binding domain 372 552 4.4E-42 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ATC04_08260 37aa2d9f25e02aafd7b42ba7f5614ea2 704 Gene3D G3DSA:3.40.50.920 570 700 5.1E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ATC04_08260 37aa2d9f25e02aafd7b42ba7f5614ea2 704 SUPERFAMILY SSF52922 563 700 3.66E-36 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ATC04_08260 37aa2d9f25e02aafd7b42ba7f5614ea2 704 ProSitePatterns PS00801 Transketolase signature 1. 24 44 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATC04_08260 37aa2d9f25e02aafd7b42ba7f5614ea2 704 Pfam PF02780 Transketolase, C-terminal domain 585 691 2.4E-13 T 11-10-2018 IPR033248 Transketolase, C-terminal domain ATC04_06980 d30567c28f0caaf63e958c3c6a61d174 227 SUPERFAMILY SSF53098 10 185 1.09E-42 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_06980 d30567c28f0caaf63e958c3c6a61d174 227 SMART SM00479 8 182 1.8E-14 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ATC04_06980 d30567c28f0caaf63e958c3c6a61d174 227 Pfam PF00929 Exonuclease 10 172 1.7E-13 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ATC04_06980 d30567c28f0caaf63e958c3c6a61d174 227 Gene3D G3DSA:3.30.420.10 3 190 9.2E-37 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_09405 3041fbd794f23199ca90e3a5d0ab1eee 409 SUPERFAMILY SSF102114 26 407 9.03E-103 T 11-10-2018 ATC04_09405 3041fbd794f23199ca90e3a5d0ab1eee 409 Pfam PF04055 Radical SAM superfamily 34 210 6.4E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ATC04_09405 3041fbd794f23199ca90e3a5d0ab1eee 409 Gene3D G3DSA:3.80.30.20 16 332 1.2E-94 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ATC04_09405 3041fbd794f23199ca90e3a5d0ab1eee 409 SMART SM00729 29 257 7.2E-53 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ATC04_09405 3041fbd794f23199ca90e3a5d0ab1eee 409 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 30 370 2.0E-70 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 ATC04_11625 0110c55656ebe38180813ae099e2f74b 263 Pfam PF09359 VTC domain 54 239 1.3E-14 T 11-10-2018 IPR018966 VTC domain ATC04_11625 0110c55656ebe38180813ae099e2f74b 263 SUPERFAMILY SSF55154 33 239 1.6E-6 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 PIRSF PIRSF001438 1 324 5.2E-104 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 4 315 32.105 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 Gene3D G3DSA:3.40.190.10 6 221 1.9E-71 T 11-10-2018 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 Gene3D G3DSA:3.40.190.10 97 211 1.9E-71 T 11-10-2018 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 246 262 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 314 4.3E-87 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 SUPERFAMILY SSF53850 4 225 9.23E-64 T 11-10-2018 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 220 2.4E-65 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 PRINTS PR00151 Porphobilinogen deaminase signature 42 62 7.0E-21 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 PRINTS PR00151 Porphobilinogen deaminase signature 121 138 7.0E-21 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 PRINTS PR00151 Porphobilinogen deaminase signature 73 92 7.0E-21 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 PRINTS PR00151 Porphobilinogen deaminase signature 140 157 7.0E-21 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 241 313 1.8E-15 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 Gene3D G3DSA:3.30.160.40 237 321 6.0E-21 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_06940 aff35e7806ceeb7343fde257ff373fe3 324 SUPERFAMILY SSF54782 235 318 4.32E-18 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_14220 ef30f6d46ce7a824015d306586399eb0 176 PIRSF PIRSF001338 2 169 4.7E-64 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 ATC04_14220 ef30f6d46ce7a824015d306586399eb0 176 Pfam PF00731 AIR carboxylase 7 145 5.2E-63 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ATC04_14220 ef30f6d46ce7a824015d306586399eb0 176 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 7 158 31.035 T 11-10-2018 IPR033747 Class I PurE ATC04_14220 ef30f6d46ce7a824015d306586399eb0 176 SUPERFAMILY SSF52255 5 159 6.02E-62 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 ATC04_14220 ef30f6d46ce7a824015d306586399eb0 176 SMART SM01001 5 154 6.5E-90 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ATC04_14220 ef30f6d46ce7a824015d306586399eb0 176 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 7 155 1.0E-60 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ATC04_14220 ef30f6d46ce7a824015d306586399eb0 176 Gene3D G3DSA:3.40.50.7700 1 173 4.2E-70 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 Gene3D G3DSA:3.40.1160.10 9 275 1.6E-77 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 TIGRFAM TIGR01027 proB: glutamate 5-kinase 20 376 8.2E-119 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 SMART SM00359 287 366 3.2E-16 T 11-10-2018 IPR002478 PUA domain GO:0003723 ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 SUPERFAMILY SSF88697 286 377 2.32E-19 T 11-10-2018 IPR015947 PUA-like superfamily ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 Hamap MF_00456 Glutamate 5-kinase [proB]. 20 269 33.028 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 Pfam PF00696 Amino acid kinase family 20 248 3.7E-36 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 PIRSF PIRSF000729 15 378 2.7E-118 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 Gene3D G3DSA:2.30.130.10 276 378 1.2E-26 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 SUPERFAMILY SSF53633 20 265 1.31E-61 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 PRINTS PR00474 Glutamate 5-kinase family signature 222 242 3.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 PRINTS PR00474 Glutamate 5-kinase family signature 57 71 3.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 PRINTS PR00474 Glutamate 5-kinase family signature 91 119 3.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 PRINTS PR00474 Glutamate 5-kinase family signature 131 152 3.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 PRINTS PR00474 Glutamate 5-kinase family signature 163 190 3.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ATC04_08660 99dd063bc61f5eec13b89ac5235f6cb0 378 Pfam PF01472 PUA domain 287 349 8.4E-18 T 11-10-2018 IPR002478 PUA domain GO:0003723 ATC04_03045 f9b4a7ee1ae695949720d2f6ee0b385f 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 ATC04_03045 f9b4a7ee1ae695949720d2f6ee0b385f 398 Gene3D G3DSA:3.40.640.10 1 396 1.8E-111 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_03045 f9b4a7ee1ae695949720d2f6ee0b385f 398 SUPERFAMILY SSF53383 7 393 2.69E-88 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_03045 f9b4a7ee1ae695949720d2f6ee0b385f 398 Pfam PF00155 Aminotransferase class I and II 30 385 7.8E-57 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATC04_11510 8a9f996f6cb96c619698a4b965c86a38 546 SUPERFAMILY SSF52540 363 541 2.48E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11510 8a9f996f6cb96c619698a4b965c86a38 546 SUPERFAMILY SSF52540 5 248 1.93E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11510 8a9f996f6cb96c619698a4b965c86a38 546 Gene3D G3DSA:3.40.50.300 313 543 2.1E-42 T 11-10-2018 ATC04_11510 8a9f996f6cb96c619698a4b965c86a38 546 SMART SM00382 374 541 7.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_11510 8a9f996f6cb96c619698a4b965c86a38 546 SMART SM00382 29 232 4.8E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_11510 8a9f996f6cb96c619698a4b965c86a38 546 Pfam PF00005 ABC transporter 368 495 9.0E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_11510 8a9f996f6cb96c619698a4b965c86a38 546 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_11510 8a9f996f6cb96c619698a4b965c86a38 546 Pfam PF00005 ABC transporter 22 187 1.3E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_11510 8a9f996f6cb96c619698a4b965c86a38 546 Gene3D G3DSA:3.40.50.300 12 283 8.0E-50 T 11-10-2018 ATC04_08615 af3cf4e0f3a3866a90c4a507e5833576 176 Pfam PF13302 Acetyltransferase (GNAT) domain 14 148 2.4E-26 T 11-10-2018 IPR000182 GNAT domain ATC04_08615 af3cf4e0f3a3866a90c4a507e5833576 176 SUPERFAMILY SSF55729 11 173 2.86E-38 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_08615 af3cf4e0f3a3866a90c4a507e5833576 176 Gene3D G3DSA:3.40.630.30 11 176 1.5E-40 T 11-10-2018 ATC04_03905 9186ca4c4fa1d2266184500445a59982 169 Gene3D G3DSA:1.20.1260.10 13 169 3.7E-43 T 11-10-2018 IPR012347 Ferritin-like ATC04_03905 9186ca4c4fa1d2266184500445a59982 169 SUPERFAMILY SSF47240 21 164 3.7E-38 T 11-10-2018 IPR009078 Ferritin-like superfamily ATC04_03905 9186ca4c4fa1d2266184500445a59982 169 ProSitePatterns PS00818 Dps protein family signature 1. 49 65 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 ATC04_03905 9186ca4c4fa1d2266184500445a59982 169 PIRSF PIRSF005900 8 169 7.9E-35 T 11-10-2018 IPR002177 DNA-binding protein Dps ATC04_03905 9186ca4c4fa1d2266184500445a59982 169 Pfam PF00210 Ferritin-like domain 31 165 7.8E-17 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ATC04_03905 9186ca4c4fa1d2266184500445a59982 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 49 65 5.9E-10 T 11-10-2018 IPR002177 DNA-binding protein Dps ATC04_03905 9186ca4c4fa1d2266184500445a59982 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 5.9E-10 T 11-10-2018 IPR002177 DNA-binding protein Dps ATC04_03905 9186ca4c4fa1d2266184500445a59982 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 73 89 5.9E-10 T 11-10-2018 IPR002177 DNA-binding protein Dps ATC04_13565 c42ac68a4b1c793b752ea8fe73da7329 284 Gene3D G3DSA:3.90.1200.10 110 270 1.2E-11 T 11-10-2018 ATC04_13565 c42ac68a4b1c793b752ea8fe73da7329 284 SUPERFAMILY SSF56112 24 217 1.25E-20 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ATC04_13565 c42ac68a4b1c793b752ea8fe73da7329 284 Pfam PF01636 Phosphotransferase enzyme family 38 217 2.1E-16 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ATC04_15135 ba3181d58cf4370eec366963dba25817 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 400 419 1.1E-8 T 11-10-2018 ATC04_15135 ba3181d58cf4370eec366963dba25817 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 1.1E-8 T 11-10-2018 ATC04_15135 ba3181d58cf4370eec366963dba25817 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 1.1E-8 T 11-10-2018 ATC04_15135 ba3181d58cf4370eec366963dba25817 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 1.1E-8 T 11-10-2018 ATC04_15135 ba3181d58cf4370eec366963dba25817 496 Gene3D G3DSA:1.20.1720.10 10 247 2.0E-45 T 11-10-2018 ATC04_15135 ba3181d58cf4370eec366963dba25817 496 SUPERFAMILY SSF103473 8 493 2.62E-66 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_15135 ba3181d58cf4370eec366963dba25817 496 Pfam PF07690 Major Facilitator Superfamily 14 409 1.8E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_03110 80918a222729a35ba624a64677ff975e 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 264 6.9E-42 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ATC04_03110 80918a222729a35ba624a64677ff975e 265 Gene3D G3DSA:3.90.226.10 4 205 5.0E-56 T 11-10-2018 ATC04_03110 80918a222729a35ba624a64677ff975e 265 SUPERFAMILY SSF52096 9 264 4.56E-59 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_03110 80918a222729a35ba624a64677ff975e 265 Gene3D G3DSA:1.10.12.10 207 264 4.0E-7 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ATC04_00250 9d31e1fd801583e4b20d62555f1c4048 287 Gene3D G3DSA:3.40.50.620 1 202 3.1E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_00250 9d31e1fd801583e4b20d62555f1c4048 287 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 1 171 6.5E-42 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ATC04_00250 9d31e1fd801583e4b20d62555f1c4048 287 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 250 19.07 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ATC04_00250 9d31e1fd801583e4b20d62555f1c4048 287 Pfam PF01171 PP-loop family 1 167 4.4E-39 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 ATC04_00250 9d31e1fd801583e4b20d62555f1c4048 287 SUPERFAMILY SSF82829 180 278 1.12E-8 T 11-10-2018 ATC04_00250 9d31e1fd801583e4b20d62555f1c4048 287 SUPERFAMILY SSF52402 2 200 6.16E-46 T 11-10-2018 ATC04_01990 08a8cc82c1c868b665b86b3d8bedac47 265 SUPERFAMILY SSF51658 4 254 6.5E-49 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ATC04_01990 08a8cc82c1c868b665b86b3d8bedac47 265 Pfam PF01261 Xylose isomerase-like TIM barrel 21 221 8.4E-23 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ATC04_01990 08a8cc82c1c868b665b86b3d8bedac47 265 Gene3D G3DSA:3.20.20.150 1 263 5.4E-53 T 11-10-2018 ATC04_01990 08a8cc82c1c868b665b86b3d8bedac47 265 PIRSF PIRSF006241 1 265 3.3E-53 T 11-10-2018 IPR026040 Hydroxypyruvate isomerase-like ATC04_06305 4b6aa60ff4c35466046b284b890574e0 391 SUPERFAMILY SSF53756 65 369 1.57E-15 T 11-10-2018 ATC04_06305 4b6aa60ff4c35466046b284b890574e0 391 Gene3D G3DSA:3.40.50.2000 195 364 2.0E-5 T 11-10-2018 ATC04_06305 4b6aa60ff4c35466046b284b890574e0 391 Gene3D G3DSA:3.40.50.2000 18 191 1.2E-7 T 11-10-2018 ATC04_06305 4b6aa60ff4c35466046b284b890574e0 391 Pfam PF13439 Glycosyltransferase Family 4 28 160 2.5E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ATC04_06055 77cf7672104dbcddf16791757a58103d 156 SUPERFAMILY SSF55826 8 152 7.33E-29 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ATC04_06055 77cf7672104dbcddf16791757a58103d 156 Gene3D G3DSA:3.90.960.10 2 154 8.2E-34 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ATC04_06055 77cf7672104dbcddf16791757a58103d 156 Pfam PF04073 Aminoacyl-tRNA editing domain 23 142 1.2E-22 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ATC04_09265 a5a80e139d9a29f043585aee79db3546 434 Pfam PF01979 Amidohydrolase family 46 418 8.4E-25 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ATC04_09265 a5a80e139d9a29f043585aee79db3546 434 SUPERFAMILY SSF51338 3 428 7.45E-23 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_09265 a5a80e139d9a29f043585aee79db3546 434 ProSitePatterns PS00483 Dihydroorotase signature 2. 300 311 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09265 a5a80e139d9a29f043585aee79db3546 434 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 16 419 1.0E-127 T 11-10-2018 ATC04_09265 a5a80e139d9a29f043585aee79db3546 434 SUPERFAMILY SSF51556 50 365 1.73E-101 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_09265 a5a80e139d9a29f043585aee79db3546 434 Gene3D G3DSA:3.20.20.140 51 366 7.2E-133 T 11-10-2018 ATC04_09265 a5a80e139d9a29f043585aee79db3546 434 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 423 42.047 T 11-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ATC04_09265 a5a80e139d9a29f043585aee79db3546 434 Gene3D G3DSA:2.30.40.10 14 418 7.2E-133 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_12145 4de745e4eae6bc829ead2fd5c6e9e7a1 370 Pfam PF00589 Phage integrase family 191 347 2.7E-20 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATC04_12145 4de745e4eae6bc829ead2fd5c6e9e7a1 370 Gene3D G3DSA:1.10.443.10 177 362 1.3E-32 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ATC04_12145 4de745e4eae6bc829ead2fd5c6e9e7a1 370 SUPERFAMILY SSF56349 72 352 2.38E-50 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATC04_12145 4de745e4eae6bc829ead2fd5c6e9e7a1 370 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 76 127 3.5E-5 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ATC04_12145 4de745e4eae6bc829ead2fd5c6e9e7a1 370 Gene3D G3DSA:1.10.150.130 47 174 1.4E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal ATC04_06540 a9a31900bcf00c801bc32f65418f747a 1314 SUPERFAMILY SSF52540 206 376 1.54E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06540 a9a31900bcf00c801bc32f65418f747a 1314 Pfam PF04471 Restriction endonuclease 42 154 1.7E-6 T 11-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 ATC04_06540 a9a31900bcf00c801bc32f65418f747a 1314 SUPERFAMILY SSF48371 419 1191 1.36E-5 T 11-10-2018 IPR016024 Armadillo-type fold ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 Gene3D G3DSA:3.50.50.60 10 325 4.7E-101 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PIRSF PIRSF000350 1 453 3.4E-67 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 SUPERFAMILY SSF55424 339 458 2.92E-27 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 448 1.2E-22 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 Gene3D G3DSA:3.50.50.60 148 264 4.7E-101 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 Gene3D G3DSA:3.30.390.30 339 458 5.3E-30 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 SUPERFAMILY SSF51905 6 330 2.19E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 9 458 1.8E-130 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 1.1E-32 T 11-10-2018 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 1.1E-32 T 11-10-2018 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.1E-32 T 11-10-2018 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 1.1E-32 T 11-10-2018 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 1.1E-32 T 11-10-2018 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 320 2.0E-65 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 3.5E-61 T 11-10-2018 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 3.5E-61 T 11-10-2018 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 3.5E-61 T 11-10-2018 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 3.5E-61 T 11-10-2018 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 3.5E-61 T 11-10-2018 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 258 272 3.5E-61 T 11-10-2018 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 3.5E-61 T 11-10-2018 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 3.5E-61 T 11-10-2018 ATC04_07490 ba832086092f1e21f6ea785cf66e73e7 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 3.5E-61 T 11-10-2018 ATC04_04695 f7f4401073637f52bce0784cd78995bc 407 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 129 143 1.2E-10 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ATC04_04695 f7f4401073637f52bce0784cd78995bc 407 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 304 323 1.2E-10 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ATC04_04695 f7f4401073637f52bce0784cd78995bc 407 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 158 1.2E-10 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ATC04_04695 f7f4401073637f52bce0784cd78995bc 407 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 215 1.2E-10 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ATC04_04695 f7f4401073637f52bce0784cd78995bc 407 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 176 192 1.2E-10 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ATC04_04695 f7f4401073637f52bce0784cd78995bc 407 Gene3D G3DSA:3.40.190.10 185 402 4.8E-87 T 11-10-2018 ATC04_04695 f7f4401073637f52bce0784cd78995bc 407 Gene3D G3DSA:3.40.190.10 71 374 4.8E-87 T 11-10-2018 ATC04_04695 f7f4401073637f52bce0784cd78995bc 407 Pfam PF13416 Bacterial extracellular solute-binding protein 93 371 1.5E-26 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ATC04_04695 f7f4401073637f52bce0784cd78995bc 407 SUPERFAMILY SSF53850 69 405 7.76E-60 T 11-10-2018 ATC04_04155 5f59c083a4dd4538f0810edb648354b5 390 Pfam PF12698 ABC-2 family transporter protein 23 363 6.9E-31 T 11-10-2018 ATC04_06945 8d480be07cf038225dcddb6914fed9d9 263 Gene3D G3DSA:3.40.50.10090 175 260 9.2E-11 T 11-10-2018 ATC04_06945 8d480be07cf038225dcddb6914fed9d9 263 SUPERFAMILY SSF69618 5 259 3.79E-39 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_06945 8d480be07cf038225dcddb6914fed9d9 263 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 253 2.7E-39 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_06945 8d480be07cf038225dcddb6914fed9d9 263 Gene3D G3DSA:3.40.50.10090 37 162 3.7E-22 T 11-10-2018 ATC04_03190 4ba1003061ba8e511390b626e0f924ac 121 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 15 118 3.3E-22 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 ATC04_03190 4ba1003061ba8e511390b626e0f924ac 121 SUPERFAMILY SSF50022 14 119 1.13E-25 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ATC04_03190 4ba1003061ba8e511390b626e0f924ac 121 Pfam PF13806 Rieske-like [2Fe-2S] domain 14 118 1.6E-21 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 ATC04_03190 4ba1003061ba8e511390b626e0f924ac 121 Gene3D G3DSA:2.102.10.10 4 120 5.3E-27 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ATC04_17235 81c2b1598c08edd2bf7f95fa902aef05 183 Gene3D G3DSA:1.10.1760.20 1 153 4.6E-11 T 11-10-2018 ATC04_03780 c8d93cea831b8c5993d0183c9a278b5c 162 Pfam PF13404 AsnC-type helix-turn-helix domain 8 48 2.1E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_03780 c8d93cea831b8c5993d0183c9a278b5c 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 6.6E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_03780 c8d93cea831b8c5993d0183c9a278b5c 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 6.6E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_03780 c8d93cea831b8c5993d0183c9a278b5c 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 6.6E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_03780 c8d93cea831b8c5993d0183c9a278b5c 162 SUPERFAMILY SSF46785 6 67 8.11E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03780 c8d93cea831b8c5993d0183c9a278b5c 162 Pfam PF01037 Lrp/AsnC ligand binding domain 77 143 1.9E-14 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATC04_03780 c8d93cea831b8c5993d0183c9a278b5c 162 Gene3D G3DSA:1.10.10.10 4 56 7.4E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03780 c8d93cea831b8c5993d0183c9a278b5c 162 SUPERFAMILY SSF54909 69 148 4.72E-16 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_03780 c8d93cea831b8c5993d0183c9a278b5c 162 Gene3D G3DSA:3.30.70.920 61 150 2.9E-19 T 11-10-2018 ATC04_03780 c8d93cea831b8c5993d0183c9a278b5c 162 SMART SM00344 8 114 1.2E-22 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATC04_06135 d5a64695cee4e1e44e7eeec5dadc9237 261 Gene3D G3DSA:3.30.300.20 18 111 1.9E-27 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ATC04_06135 d5a64695cee4e1e44e7eeec5dadc9237 261 SUPERFAMILY SSF54814 2 110 1.54E-32 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ATC04_06135 d5a64695cee4e1e44e7eeec5dadc9237 261 SUPERFAMILY SSF54821 111 210 5.36E-38 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06135 d5a64695cee4e1e44e7eeec5dadc9237 261 SMART SM00322 64 129 6.0E-7 T 11-10-2018 IPR004087 K Homology domain GO:0003676 ATC04_06135 d5a64695cee4e1e44e7eeec5dadc9237 261 Pfam PF07650 KH domain 43 114 6.6E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06135 d5a64695cee4e1e44e7eeec5dadc9237 261 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 210 37.782 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ATC04_06135 d5a64695cee4e1e44e7eeec5dadc9237 261 Pfam PF00189 Ribosomal protein S3, C-terminal domain 124 206 3.5E-37 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06135 d5a64695cee4e1e44e7eeec5dadc9237 261 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 214 3.4E-90 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ATC04_06135 d5a64695cee4e1e44e7eeec5dadc9237 261 Gene3D G3DSA:3.30.1140.32 112 212 2.0E-40 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06135 d5a64695cee4e1e44e7eeec5dadc9237 261 ProSitePatterns PS00548 Ribosomal protein S3 signature. 167 201 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_05310 b98c32ec883faf64c17ae6f15d93b5c0 141 Pfam PF13396 Phospholipase_D-nuclease N-terminal 14 59 3.2E-11 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal ATC04_09825 709a4b33c8ef1ec0adc83b59bba46b7b 185 SUPERFAMILY SSF55729 4 142 1.12E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_09825 709a4b33c8ef1ec0adc83b59bba46b7b 185 Gene3D G3DSA:3.40.630.30 4 174 9.2E-16 T 11-10-2018 ATC04_09825 709a4b33c8ef1ec0adc83b59bba46b7b 185 Pfam PF00583 Acetyltransferase (GNAT) family 57 136 4.1E-8 T 11-10-2018 IPR000182 GNAT domain ATC04_16780 3d7a09297b61e5783b5878a318dd8ced 676 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 179 267 6.3E-19 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ATC04_16780 3d7a09297b61e5783b5878a318dd8ced 676 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 298 653 3.1E-98 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 ATC04_16780 3d7a09297b61e5783b5878a318dd8ced 676 SUPERFAMILY SSF52794 176 272 1.12E-30 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ATC04_16780 3d7a09297b61e5783b5878a318dd8ced 676 Gene3D G3DSA:3.40.930.10 1 147 3.6E-37 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ATC04_16780 3d7a09297b61e5783b5878a318dd8ced 676 SUPERFAMILY SSF55804 2 145 6.02E-32 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ATC04_16780 3d7a09297b61e5783b5878a318dd8ced 676 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 146 1.2E-31 T 11-10-2018 IPR002178 PTS EIIA type-2 domain ATC04_16780 3d7a09297b61e5783b5878a318dd8ced 676 Gene3D G3DSA:3.40.50.2300 166 275 3.7E-36 T 11-10-2018 ATC04_16780 3d7a09297b61e5783b5878a318dd8ced 676 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 178 259 8.2E-25 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 ATC04_16780 3d7a09297b61e5783b5878a318dd8ced 676 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 9 131 3.0E-34 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 ATC04_16615 a57bfa5cb43406c09a249526cf42ab46 472 Pfam PF00296 Luciferase-like monooxygenase 29 393 8.6E-57 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ATC04_16615 a57bfa5cb43406c09a249526cf42ab46 472 Gene3D G3DSA:3.20.20.30 8 458 2.1E-133 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_16615 a57bfa5cb43406c09a249526cf42ab46 472 SUPERFAMILY SSF51679 11 439 1.09E-116 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_16615 a57bfa5cb43406c09a249526cf42ab46 472 PIRSF PIRSF000337 7 450 1.3E-122 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 ATC04_16615 a57bfa5cb43406c09a249526cf42ab46 472 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 12 435 3.9E-147 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 ATC04_04900 40c50771ebeb0c0ca7431f42210b0f13 774 SMART SM00382 45 232 9.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04900 40c50771ebeb0c0ca7431f42210b0f13 774 SMART SM00382 304 504 9.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04900 40c50771ebeb0c0ca7431f42210b0f13 774 Pfam PF02361 Cobalt transport protein 522 731 2.4E-23 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component ATC04_04900 40c50771ebeb0c0ca7431f42210b0f13 774 Gene3D G3DSA:3.40.50.300 14 258 2.3E-53 T 11-10-2018 ATC04_04900 40c50771ebeb0c0ca7431f42210b0f13 774 Pfam PF00005 ABC transporter 298 455 2.2E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_04900 40c50771ebeb0c0ca7431f42210b0f13 774 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_04900 40c50771ebeb0c0ca7431f42210b0f13 774 SUPERFAMILY SSF52540 32 234 1.07E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_04900 40c50771ebeb0c0ca7431f42210b0f13 774 Pfam PF00005 ABC transporter 38 183 4.5E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_04900 40c50771ebeb0c0ca7431f42210b0f13 774 Gene3D G3DSA:3.40.50.300 272 515 3.9E-45 T 11-10-2018 ATC04_04900 40c50771ebeb0c0ca7431f42210b0f13 774 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_04900 40c50771ebeb0c0ca7431f42210b0f13 774 SUPERFAMILY SSF52540 280 505 1.16E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_14025 c32257c6da745c5e84b494f52c7b69a7 193 Gene3D G3DSA:3.40.50.1470 1 193 1.7E-66 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 ATC04_14025 c32257c6da745c5e84b494f52c7b69a7 193 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 113 123 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 ATC04_14025 c32257c6da745c5e84b494f52c7b69a7 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 32.597 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ATC04_14025 c32257c6da745c5e84b494f52c7b69a7 193 SUPERFAMILY SSF53178 5 191 3.01E-63 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 ATC04_14025 c32257c6da745c5e84b494f52c7b69a7 193 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 1.8E-53 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ATC04_14025 c32257c6da745c5e84b494f52c7b69a7 193 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 ATC04_14025 c32257c6da745c5e84b494f52c7b69a7 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 7 191 2.1E-52 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ATC04_09420 524046203213150fd60a76ce3f67806b 337 SUPERFAMILY SSF46785 5 80 9.09E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_09420 524046203213150fd60a76ce3f67806b 337 Gene3D G3DSA:3.30.450.40 103 335 1.2E-31 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_09420 524046203213150fd60a76ce3f67806b 337 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 5 334 5.3E-84 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 ATC04_09420 524046203213150fd60a76ce3f67806b 337 PIRSF PIRSF005485 3 337 1.4E-89 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 ATC04_09420 524046203213150fd60a76ce3f67806b 337 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 328 24.848 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 ATC04_09420 524046203213150fd60a76ce3f67806b 337 Pfam PF01628 HrcA protein C terminal domain 103 321 2.7E-52 T 11-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 ATC04_09420 524046203213150fd60a76ce3f67806b 337 SUPERFAMILY SSF55781 71 336 5.49E-44 T 11-10-2018 ATC04_09420 524046203213150fd60a76ce3f67806b 337 Gene3D G3DSA:1.10.10.10 2 83 5.9E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_09420 524046203213150fd60a76ce3f67806b 337 Gene3D G3DSA:3.30.390.60 127 228 1.2E-31 T 11-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily ATC04_00440 2260a34456e935d021c940a7ca06eec8 1062 Gene3D G3DSA:3.40.50.1000 16 241 6.6E-47 T 11-10-2018 IPR023214 HAD superfamily ATC04_00440 2260a34456e935d021c940a7ca06eec8 1062 Gene3D G3DSA:2.60.420.10 952 1021 9.9E-20 T 11-10-2018 ATC04_00440 2260a34456e935d021c940a7ca06eec8 1062 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 218 7.5E-12 T 11-10-2018 ATC04_00440 2260a34456e935d021c940a7ca06eec8 1062 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 265 529 4.0E-40 T 11-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 ATC04_00440 2260a34456e935d021c940a7ca06eec8 1062 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 970 1019 5.3E-10 T 11-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal ATC04_00440 2260a34456e935d021c940a7ca06eec8 1062 SUPERFAMILY SSF48208 534 1016 3.4E-113 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 ATC04_00440 2260a34456e935d021c940a7ca06eec8 1062 SUPERFAMILY SSF56784 12 244 1.03E-36 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_00440 2260a34456e935d021c940a7ca06eec8 1062 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 172 218 1.7E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ATC04_00440 2260a34456e935d021c940a7ca06eec8 1062 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 586 966 4.0E-112 T 11-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 ATC04_00440 2260a34456e935d021c940a7ca06eec8 1062 SUPERFAMILY SSF74650 251 530 6.91E-41 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ATC04_00440 2260a34456e935d021c940a7ca06eec8 1062 Gene3D G3DSA:2.70.98.40 249 531 5.9E-35 T 11-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily ATC04_00440 2260a34456e935d021c940a7ca06eec8 1062 Gene3D G3DSA:1.50.10.10 580 951 2.6E-126 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 ATC04_00440 2260a34456e935d021c940a7ca06eec8 1062 Gene3D G3DSA:1.10.150.240 25 116 6.6E-47 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ATC04_13560 ea5a31c2a2485341db495da71326bd4c 260 Pfam PF02517 CAAX protease self-immunity 154 243 1.0E-11 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 ATC04_05635 58d7c740147ed2f47a047273c1708592 75 Gene3D G3DSA:1.10.260.40 2 67 3.6E-6 T 11-10-2018 ATC04_05635 58d7c740147ed2f47a047273c1708592 75 SUPERFAMILY SSF47413 6 65 1.69E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_17995 f3e3c1756dc562764f6a9e433cc3a3ce 569 Gene3D G3DSA:3.40.50.300 339 557 1.9E-25 T 11-10-2018 ATC04_17995 f3e3c1756dc562764f6a9e433cc3a3ce 569 Pfam PF12696 TraM recognition site of TraD and TraG 412 531 4.5E-28 T 11-10-2018 IPR032689 TraD/TraG, TraM recognition site ATC04_17995 f3e3c1756dc562764f6a9e433cc3a3ce 569 SUPERFAMILY SSF52540 168 542 2.44E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_01815 12625e492b835e28750a2ae450d63d72 388 SUPERFAMILY SSF110738 14 386 1.44E-105 T 11-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 ATC04_01815 12625e492b835e28750a2ae450d63d72 388 Gene3D G3DSA:3.40.50.10350 14 375 5.2E-116 T 11-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold ATC04_01815 12625e492b835e28750a2ae450d63d72 388 Gene3D G3DSA:3.90.1510.10 58 292 5.2E-116 T 11-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 ATC04_01815 12625e492b835e28750a2ae450d63d72 388 PIRSF PIRSF006078 13 388 2.1E-117 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 ATC04_01815 12625e492b835e28750a2ae450d63d72 388 Pfam PF02595 Glycerate kinase family 15 386 1.5E-121 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 ATC04_01815 12625e492b835e28750a2ae450d63d72 388 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 14 386 2.8E-115 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 ATC04_02635 7e889df39a01a48c43749fcd4e8047e3 312 Gene3D G3DSA:1.20.950.20 72 260 1.6E-9 T 11-10-2018 ATC04_02635 7e889df39a01a48c43749fcd4e8047e3 312 Pfam PF01292 Prokaryotic cytochrome b561 74 267 9.6E-16 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ATC04_02635 7e889df39a01a48c43749fcd4e8047e3 312 SUPERFAMILY SSF81342 66 275 7.45E-23 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ATC04_11565 4ed2d43a4c436826d515df654af67b47 456 Gene3D G3DSA:1.20.1250.20 12 448 9.6E-68 T 11-10-2018 ATC04_11565 4ed2d43a4c436826d515df654af67b47 456 Pfam PF07690 Major Facilitator Superfamily 32 366 5.2E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_11565 4ed2d43a4c436826d515df654af67b47 456 SUPERFAMILY SSF103473 10 437 1.44E-67 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_11565 4ed2d43a4c436826d515df654af67b47 456 ProSitePatterns PS00216 Sugar transport proteins signature 1. 298 314 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_02360 86d0fa58053308982bce6abba1f81943 457 SUPERFAMILY SSF102588 37 229 7.85E-36 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ATC04_02360 86d0fa58053308982bce6abba1f81943 457 SUPERFAMILY SSF53335 272 413 7.21E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_02360 86d0fa58053308982bce6abba1f81943 457 Gene3D G3DSA:3.40.50.150 287 451 1.4E-38 T 11-10-2018 ATC04_02360 86d0fa58053308982bce6abba1f81943 457 Gene3D G3DSA:3.40.50.10320 33 260 5.6E-35 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ATC04_02360 86d0fa58053308982bce6abba1f81943 457 Pfam PF02585 GlcNAc-PI de-N-acetylase 40 168 9.9E-19 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 ATC04_02360 86d0fa58053308982bce6abba1f81943 457 Pfam PF13649 Methyltransferase domain 308 403 1.3E-11 T 11-10-2018 ATC04_18345 9fd4eca581c4daa414e4ec585219b68e 994 SMART SM01043 851 993 4.1E-24 T 11-10-2018 IPR005158 Bacterial transcriptional activator domain ATC04_18345 9fd4eca581c4daa414e4ec585219b68e 994 SUPERFAMILY SSF52540 11 152 1.64E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_18345 9fd4eca581c4daa414e4ec585219b68e 994 SUPERFAMILY SSF48452 855 994 9.76E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_18345 9fd4eca581c4daa414e4ec585219b68e 994 Gene3D G3DSA:1.10.10.10 757 845 1.0E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_18345 9fd4eca581c4daa414e4ec585219b68e 994 Gene3D G3DSA:1.25.40.10 855 994 6.5E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_18345 9fd4eca581c4daa414e4ec585219b68e 994 Gene3D G3DSA:1.25.40.10 525 733 8.7E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_18345 9fd4eca581c4daa414e4ec585219b68e 994 SUPERFAMILY SSF46894 762 833 1.3E-6 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_18345 9fd4eca581c4daa414e4ec585219b68e 994 Pfam PF03704 Bacterial transcriptional activator domain 857 993 1.9E-13 T 11-10-2018 IPR005158 Bacterial transcriptional activator domain ATC04_16760 818754c9189bb3c1394e8f725de8302f 363 Pfam PF01032 FecCD transport family 50 356 2.6E-81 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ATC04_16760 818754c9189bb3c1394e8f725de8302f 363 SUPERFAMILY SSF81345 32 356 1.26E-70 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_16760 818754c9189bb3c1394e8f725de8302f 363 Gene3D G3DSA:1.10.3470.10 37 362 2.3E-84 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_11540 b7f7a17afa4a55bf569371e26fa0b627 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 288 2.0E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_11540 b7f7a17afa4a55bf569371e26fa0b627 297 SUPERFAMILY SSF161098 23 297 5.79E-59 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_11540 b7f7a17afa4a55bf569371e26fa0b627 297 Gene3D G3DSA:1.10.3720.10 21 285 1.6E-57 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_11690 50ad5a3ae5351a7b7cc6747afe4e3407 432 SUPERFAMILY SSF54675 2 132 6.87E-39 T 11-10-2018 ATC04_11690 50ad5a3ae5351a7b7cc6747afe4e3407 432 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 151 340 2.3E-5 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 ATC04_11690 50ad5a3ae5351a7b7cc6747afe4e3407 432 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 4 369 4.2E-118 T 11-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 ATC04_11690 50ad5a3ae5351a7b7cc6747afe4e3407 432 SUPERFAMILY SSF51690 134 427 6.04E-80 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ATC04_11690 50ad5a3ae5351a7b7cc6747afe4e3407 432 PIRSF PIRSF000484 1 430 6.2E-93 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 ATC04_11690 50ad5a3ae5351a7b7cc6747afe4e3407 432 Gene3D G3DSA:3.20.20.70 146 305 2.7E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_11690 50ad5a3ae5351a7b7cc6747afe4e3407 432 Gene3D G3DSA:3.20.140.10 5 367 2.7E-104 T 11-10-2018 ATC04_06910 637172970b3ef78d53f1c173cde0d7c4 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 66 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ATC04_06910 637172970b3ef78d53f1c173cde0d7c4 207 SUPERFAMILY SSF48498 90 202 3.26E-17 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_06910 637172970b3ef78d53f1c173cde0d7c4 207 SUPERFAMILY SSF46689 11 94 4.99E-22 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_06910 637172970b3ef78d53f1c173cde0d7c4 207 Gene3D G3DSA:1.10.357.10 8 207 1.1E-47 T 11-10-2018 ATC04_06910 637172970b3ef78d53f1c173cde0d7c4 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 8.1E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_06910 637172970b3ef78d53f1c173cde0d7c4 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 4.7E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_06910 637172970b3ef78d53f1c173cde0d7c4 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 4.7E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_08990 7c025d66535672d319e5bd483e90c5fe 202 Pfam PF12840 Helix-turn-helix domain 2 56 1.5E-10 T 11-10-2018 ATC04_08990 7c025d66535672d319e5bd483e90c5fe 202 SMART SM00418 1 72 0.0033 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_08990 7c025d66535672d319e5bd483e90c5fe 202 Gene3D G3DSA:1.10.10.10 1 133 4.9E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_08990 7c025d66535672d319e5bd483e90c5fe 202 SUPERFAMILY SSF46785 2 75 1.9E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_04575 34e91477357725e544b2fde031533ef1 470 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ATC04_04575 34e91477357725e544b2fde031533ef1 470 Pfam PF00171 Aldehyde dehydrogenase family 20 466 3.2E-141 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_04575 34e91477357725e544b2fde031533ef1 470 ProSitePatterns PS01191 Ribosomal protein S3Ae signature. 30 42 - T 11-10-2018 IPR018281 Ribosomal protein S3Ae, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_04575 34e91477357725e544b2fde031533ef1 470 Gene3D G3DSA:3.40.605.10 21 467 1.4E-156 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_04575 34e91477357725e544b2fde031533ef1 470 SUPERFAMILY SSF53720 17 468 4.58E-143 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_04575 34e91477357725e544b2fde031533ef1 470 Gene3D G3DSA:3.40.309.10 250 440 1.4E-156 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_04575 34e91477357725e544b2fde031533ef1 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ATC04_14840 fecb71131d2007e4874292c1f0cb4ca5 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 100 273 6.3E-45 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ATC04_14840 fecb71131d2007e4874292c1f0cb4ca5 308 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 213 229 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ATC04_14840 fecb71131d2007e4874292c1f0cb4ca5 308 Gene3D G3DSA:3.40.50.720 29 304 9.8E-71 T 11-10-2018 ATC04_14840 fecb71131d2007e4874292c1f0cb4ca5 308 SUPERFAMILY SSF51735 94 273 2.0E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_14840 fecb71131d2007e4874292c1f0cb4ca5 308 Gene3D G3DSA:3.40.50.720 92 279 9.8E-71 T 11-10-2018 ATC04_04590 8db83f73e3bf4ac480389189e00265d0 147 SUPERFAMILY SSF53850 26 111 2.21E-12 T 11-10-2018 ATC04_04590 8db83f73e3bf4ac480389189e00265d0 147 Gene3D G3DSA:3.40.190.10 16 146 2.7E-14 T 11-10-2018 ATC04_04590 8db83f73e3bf4ac480389189e00265d0 147 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 111 2.6E-9 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ATC04_17355 c11ced4cbfefc803956795f1c9e81677 112 Pfam PF12840 Helix-turn-helix domain 13 70 3.6E-9 T 11-10-2018 ATC04_17355 c11ced4cbfefc803956795f1c9e81677 112 SUPERFAMILY SSF46785 9 103 3.6E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_17355 c11ced4cbfefc803956795f1c9e81677 112 SMART SM00418 13 94 3.7E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_17355 c11ced4cbfefc803956795f1c9e81677 112 Gene3D G3DSA:1.10.10.10 5 112 1.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_05230 0d868fc4bdae49fd4788901f43115dcc 391 Gene3D G3DSA:3.30.9.30 37 264 6.6E-68 T 11-10-2018 ATC04_05230 0d868fc4bdae49fd4788901f43115dcc 391 Gene3D G3DSA:3.50.50.60 6 340 6.6E-68 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_05230 0d868fc4bdae49fd4788901f43115dcc 391 SUPERFAMILY SSF51905 5 366 8.49E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_05230 0d868fc4bdae49fd4788901f43115dcc 391 Pfam PF01494 FAD binding domain 5 337 7.8E-17 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 ATC04_05230 0d868fc4bdae49fd4788901f43115dcc 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 273 288 1.2E-17 T 11-10-2018 ATC04_05230 0d868fc4bdae49fd4788901f43115dcc 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.2E-17 T 11-10-2018 ATC04_05230 0d868fc4bdae49fd4788901f43115dcc 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 304 1.2E-17 T 11-10-2018 ATC04_05230 0d868fc4bdae49fd4788901f43115dcc 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 1.2E-17 T 11-10-2018 ATC04_03980 e4864232f3782ed2143865db7f6cce51 426 Gene3D G3DSA:1.20.1250.20 220 407 8.1E-21 T 11-10-2018 ATC04_03980 e4864232f3782ed2143865db7f6cce51 426 PRINTS PR01035 Tetracycline resistance protein signature 37 53 8.9E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_03980 e4864232f3782ed2143865db7f6cce51 426 PRINTS PR01035 Tetracycline resistance protein signature 185 205 8.9E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_03980 e4864232f3782ed2143865db7f6cce51 426 PRINTS PR01035 Tetracycline resistance protein signature 317 337 8.9E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_03980 e4864232f3782ed2143865db7f6cce51 426 PRINTS PR01035 Tetracycline resistance protein signature 67 86 8.9E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_03980 e4864232f3782ed2143865db7f6cce51 426 SUPERFAMILY SSF103473 9 407 7.46E-63 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_03980 e4864232f3782ed2143865db7f6cce51 426 Gene3D G3DSA:1.20.1250.20 27 217 1.5E-28 T 11-10-2018 ATC04_03980 e4864232f3782ed2143865db7f6cce51 426 Pfam PF07690 Major Facilitator Superfamily 36 259 7.0E-26 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_10435 77298c1dcb3f47d9e62fa38a7cc4a320 500 Gene3D G3DSA:3.30.870.10 115 323 8.2E-38 T 11-10-2018 ATC04_10435 77298c1dcb3f47d9e62fa38a7cc4a320 500 SUPERFAMILY SSF56024 276 485 3.14E-44 T 11-10-2018 ATC04_10435 77298c1dcb3f47d9e62fa38a7cc4a320 500 Pfam PF13091 PLD-like domain 135 283 1.6E-15 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ATC04_10435 77298c1dcb3f47d9e62fa38a7cc4a320 500 Pfam PF13091 PLD-like domain 340 462 3.1E-24 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ATC04_10435 77298c1dcb3f47d9e62fa38a7cc4a320 500 Gene3D G3DSA:3.30.870.10 329 469 2.6E-25 T 11-10-2018 ATC04_10435 77298c1dcb3f47d9e62fa38a7cc4a320 500 SMART SM00155 220 247 0.052 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ATC04_10435 77298c1dcb3f47d9e62fa38a7cc4a320 500 SMART SM00155 413 440 1.9E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ATC04_10435 77298c1dcb3f47d9e62fa38a7cc4a320 500 Pfam PF13396 Phospholipase_D-nuclease N-terminal 26 62 6.6E-8 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal ATC04_10435 77298c1dcb3f47d9e62fa38a7cc4a320 500 SUPERFAMILY SSF56024 112 328 2.92E-40 T 11-10-2018 ATC04_10435 77298c1dcb3f47d9e62fa38a7cc4a320 500 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 20 499 1.5E-94 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 ATC04_16230 f0f938ae132f1b77bc9d4a3f5262fa44 234 Gene3D G3DSA:1.10.357.10 9 213 1.1E-46 T 11-10-2018 ATC04_16230 f0f938ae132f1b77bc9d4a3f5262fa44 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.6E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_16230 f0f938ae132f1b77bc9d4a3f5262fa44 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.6E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_16230 f0f938ae132f1b77bc9d4a3f5262fa44 234 SUPERFAMILY SSF48498 85 212 3.47E-19 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_16230 f0f938ae132f1b77bc9d4a3f5262fa44 234 SUPERFAMILY SSF46689 3 84 7.18E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_16230 f0f938ae132f1b77bc9d4a3f5262fa44 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 1.4E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_18385 1f52a508835a531b7cce162af565dc38 195 SUPERFAMILY SSF51905 5 189 2.21E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_18385 1f52a508835a531b7cce162af565dc38 195 Pfam PF00890 FAD binding domain 12 182 1.1E-32 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_18385 1f52a508835a531b7cce162af565dc38 195 Gene3D G3DSA:3.50.50.60 2 190 1.0E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_13090 1a7407ce049521341f26a8eb157ca075 271 Gene3D G3DSA:1.10.10.1320 2 71 2.8E-10 T 11-10-2018 ATC04_13090 1a7407ce049521341f26a8eb157ca075 271 Pfam PF10099 Anti-sigma-K factor rskA 58 268 2.9E-27 T 11-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 ATC04_11900 a653cfe113e7b1409625527e37a9ce39 280 ProSitePatterns PS00380 Rhodanese signature 1. 39 50 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 ATC04_11900 a653cfe113e7b1409625527e37a9ce39 280 SUPERFAMILY SSF52821 2 148 1.3E-37 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_11900 a653cfe113e7b1409625527e37a9ce39 280 Gene3D G3DSA:3.40.250.10 164 277 8.6E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_11900 a653cfe113e7b1409625527e37a9ce39 280 Gene3D G3DSA:3.40.250.10 1 149 5.5E-42 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_11900 a653cfe113e7b1409625527e37a9ce39 280 SMART SM00450 7 132 7.4E-27 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_11900 a653cfe113e7b1409625527e37a9ce39 280 SMART SM00450 152 269 2.4E-6 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_11900 a653cfe113e7b1409625527e37a9ce39 280 SUPERFAMILY SSF52821 166 276 5.76E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_11900 a653cfe113e7b1409625527e37a9ce39 280 Pfam PF00581 Rhodanese-like domain 8 127 2.2E-18 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_11900 a653cfe113e7b1409625527e37a9ce39 280 Pfam PF00581 Rhodanese-like domain 161 265 6.6E-5 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_05535 047bc3b1284d784faff7947b18a56a74 445 SUPERFAMILY SSF56322 43 443 3.92E-78 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ATC04_05535 047bc3b1284d784faff7947b18a56a74 445 Gene3D G3DSA:3.60.120.10 58 445 3.7E-84 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ATC04_05535 047bc3b1284d784faff7947b18a56a74 445 Pfam PF00425 chorismate binding enzyme 180 434 4.1E-59 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ATC04_05535 047bc3b1284d784faff7947b18a56a74 445 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 99 442 2.8E-74 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 ATC04_12555 d0c1f167aed01e87a0757ceeda47c821 149 PRINTS PR00502 NUDIX hydrolase family signature 52 67 2.4E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATC04_12555 d0c1f167aed01e87a0757ceeda47c821 149 PRINTS PR00502 NUDIX hydrolase family signature 38 52 2.4E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATC04_12555 d0c1f167aed01e87a0757ceeda47c821 149 Pfam PF00293 NUDIX domain 9 121 6.4E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_12555 d0c1f167aed01e87a0757ceeda47c821 149 Gene3D G3DSA:3.90.79.10 2 142 2.8E-25 T 11-10-2018 ATC04_12555 d0c1f167aed01e87a0757ceeda47c821 149 SUPERFAMILY SSF55811 8 139 9.34E-23 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_12555 d0c1f167aed01e87a0757ceeda47c821 149 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATC04_17120 8d75c10b3f7ba0bfa860db64adfc004b 123 Pfam PF06262 Zincin-like metallopeptidase 29 122 1.2E-30 T 11-10-2018 IPR010428 Zincin-like metallopeptidase ATC04_17120 8d75c10b3f7ba0bfa860db64adfc004b 123 SUPERFAMILY SSF55486 7 117 1.41E-30 T 11-10-2018 ATC04_17120 8d75c10b3f7ba0bfa860db64adfc004b 123 Gene3D G3DSA:3.30.2010.20 2 122 5.6E-37 T 11-10-2018 IPR038555 Zincin-like metallopeptidase superfamily ATC04_13885 916344b33cbbe9771da1c21ab1e1f8d1 455 SUPERFAMILY SSF118215 19 423 1.57E-92 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ATC04_13885 916344b33cbbe9771da1c21ab1e1f8d1 455 PRINTS PR00173 Glutamate-aspartate symporter signature 92 117 8.2E-28 T 11-10-2018 ATC04_13885 916344b33cbbe9771da1c21ab1e1f8d1 455 PRINTS PR00173 Glutamate-aspartate symporter signature 167 189 8.2E-28 T 11-10-2018 ATC04_13885 916344b33cbbe9771da1c21ab1e1f8d1 455 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 8.2E-28 T 11-10-2018 ATC04_13885 916344b33cbbe9771da1c21ab1e1f8d1 455 PRINTS PR00173 Glutamate-aspartate symporter signature 377 397 8.2E-28 T 11-10-2018 ATC04_13885 916344b33cbbe9771da1c21ab1e1f8d1 455 PRINTS PR00173 Glutamate-aspartate symporter signature 316 342 8.2E-28 T 11-10-2018 ATC04_13885 916344b33cbbe9771da1c21ab1e1f8d1 455 PRINTS PR00173 Glutamate-aspartate symporter signature 62 82 8.2E-28 T 11-10-2018 ATC04_13885 916344b33cbbe9771da1c21ab1e1f8d1 455 PRINTS PR00173 Glutamate-aspartate symporter signature 214 233 8.2E-28 T 11-10-2018 ATC04_13885 916344b33cbbe9771da1c21ab1e1f8d1 455 PRINTS PR00173 Glutamate-aspartate symporter signature 351 370 8.2E-28 T 11-10-2018 ATC04_13885 916344b33cbbe9771da1c21ab1e1f8d1 455 Gene3D G3DSA:1.10.3860.10 12 438 8.7E-109 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ATC04_13885 916344b33cbbe9771da1c21ab1e1f8d1 455 Pfam PF00375 Sodium:dicarboxylate symporter family 19 422 7.9E-107 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATC04_14865 63abd7417e6c58d2017f15caa732b18d 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 1.1E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_14865 63abd7417e6c58d2017f15caa732b18d 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.9E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_14865 63abd7417e6c58d2017f15caa732b18d 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.9E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_14865 63abd7417e6c58d2017f15caa732b18d 197 Gene3D G3DSA:1.10.357.10 6 197 6.2E-27 T 11-10-2018 ATC04_14865 63abd7417e6c58d2017f15caa732b18d 197 SUPERFAMILY SSF46689 5 63 2.24E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_10585 1e61538da24779aeb991d0f7ddab52fd 444 Pfam PF11380 Stealth protein CR2, conserved region 2 175 280 5.3E-44 T 11-10-2018 IPR021520 Stealth protein CR2, conserved region 2 GO:0016772 ATC04_10585 1e61538da24779aeb991d0f7ddab52fd 444 Pfam PF17102 Stealth protein CR3, conserved region 3 325 372 2.2E-13 T 11-10-2018 IPR031357 Stealth protein CR3, conserved region 3 ATC04_10585 1e61538da24779aeb991d0f7ddab52fd 444 Pfam PF17101 Stealth protein CR1, conserved region 1 134 158 6.6E-9 T 11-10-2018 IPR031358 Stealth protein CR1, conserved region 1 ATC04_03150 bf4ff69059fbb23470ae534f48c9b508 782 SMART SM01008 28 135 2.1E-44 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ATC04_03150 bf4ff69059fbb23470ae534f48c9b508 782 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 156 701 1.8E-190 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ATC04_03150 bf4ff69059fbb23470ae534f48c9b508 782 SUPERFAMILY SSF56003 137 771 5.1E-186 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 ATC04_03150 bf4ff69059fbb23470ae534f48c9b508 782 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 28 134 4.2E-23 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ATC04_03150 bf4ff69059fbb23470ae534f48c9b508 782 Gene3D G3DSA:3.30.365.10 1 779 2.0E-267 T 11-10-2018 ATC04_03150 bf4ff69059fbb23470ae534f48c9b508 782 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 14 770 6.7E-277 T 11-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 ATC04_03150 bf4ff69059fbb23470ae534f48c9b508 782 SUPERFAMILY SSF54665 5 135 1.7E-41 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily ATC04_00970 f5ba5ac7af9061b9c1377a92ccb2ade2 141 SUPERFAMILY SSF55961 1 137 6.37E-24 T 11-10-2018 ATC04_00970 f5ba5ac7af9061b9c1377a92ccb2ade2 141 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 7 137 5.5E-14 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like ATC04_00970 f5ba5ac7af9061b9c1377a92ccb2ade2 141 Gene3D G3DSA:3.30.530.20 1 140 4.0E-26 T 11-10-2018 IPR023393 START-like domain superfamily ATC04_12185 56f251c5c7ec8394681d09c7a404a25b 224 SUPERFAMILY SSF69593 8 217 1.44E-50 T 11-10-2018 ATC04_12185 56f251c5c7ec8394681d09c7a404a25b 224 Pfam PF01553 Acyltransferase 21 151 8.6E-25 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ATC04_12185 56f251c5c7ec8394681d09c7a404a25b 224 SMART SM00563 35 154 6.5E-33 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ATC04_01640 3c47f9e9e05214e8218abbe8d3d63734 297 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 17 296 43.399 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01640 3c47f9e9e05214e8218abbe8d3d63734 297 Gene3D G3DSA:3.40.50.170 101 297 4.1E-72 T 11-10-2018 ATC04_01640 3c47f9e9e05214e8218abbe8d3d63734 297 Pfam PF00551 Formyl transferase 102 278 1.8E-41 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATC04_01640 3c47f9e9e05214e8218abbe8d3d63734 297 Gene3D G3DSA:3.30.70.260 15 99 1.4E-22 T 11-10-2018 ATC04_01640 3c47f9e9e05214e8218abbe8d3d63734 297 SUPERFAMILY SSF55021 20 95 2.29E-14 T 11-10-2018 ATC04_01640 3c47f9e9e05214e8218abbe8d3d63734 297 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 21 296 9.4E-100 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01640 3c47f9e9e05214e8218abbe8d3d63734 297 SUPERFAMILY SSF53328 102 296 7.59E-64 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATC04_01640 3c47f9e9e05214e8218abbe8d3d63734 297 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 270 295 1.7E-45 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01640 3c47f9e9e05214e8218abbe8d3d63734 297 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 124 151 1.7E-45 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01640 3c47f9e9e05214e8218abbe8d3d63734 297 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 102 124 1.7E-45 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01640 3c47f9e9e05214e8218abbe8d3d63734 297 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 248 270 1.7E-45 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01640 3c47f9e9e05214e8218abbe8d3d63734 297 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 22 48 1.7E-45 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ATC04_01640 3c47f9e9e05214e8218abbe8d3d63734 297 PIRSF PIRSF036480 17 297 1.2E-104 T 11-10-2018 ATC04_06915 813d4219dbbafaba7a385beff4baf1f4 437 Gene3D G3DSA:3.40.50.720 160 310 1.0E-24 T 11-10-2018 ATC04_06915 813d4219dbbafaba7a385beff4baf1f4 437 SUPERFAMILY SSF51735 177 303 1.26E-11 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_06915 813d4219dbbafaba7a385beff4baf1f4 437 Gene3D G3DSA:3.30.460.30 2 156 4.4E-39 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATC04_06915 813d4219dbbafaba7a385beff4baf1f4 437 PIRSF PIRSF000445 1 425 8.4E-91 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATC04_06915 813d4219dbbafaba7a385beff4baf1f4 437 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 8 154 2.2E-33 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATC04_06915 813d4219dbbafaba7a385beff4baf1f4 437 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 315 411 1.0E-15 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATC04_06915 813d4219dbbafaba7a385beff4baf1f4 437 SUPERFAMILY SSF69075 312 411 5.36E-11 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATC04_06915 813d4219dbbafaba7a385beff4baf1f4 437 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 178 300 2.6E-7 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ATC04_06915 813d4219dbbafaba7a385beff4baf1f4 437 SUPERFAMILY SSF69742 3 156 1.96E-31 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATC04_06915 813d4219dbbafaba7a385beff4baf1f4 437 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 409 19.555 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATC04_06915 813d4219dbbafaba7a385beff4baf1f4 437 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATC04_06915 813d4219dbbafaba7a385beff4baf1f4 437 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 7 412 1.4E-67 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATC04_02730 2d4d8d2628c65a1f0068dd41005513d6 473 Gene3D G3DSA:1.20.1740.10 20 464 3.6E-115 T 11-10-2018 ATC04_02730 2d4d8d2628c65a1f0068dd41005513d6 473 Pfam PF13520 Amino acid permease 26 431 1.6E-58 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_02730 2d4d8d2628c65a1f0068dd41005513d6 473 PIRSF PIRSF006060 6 471 2.3E-90 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_15145 c8f52da23703abdf9df7f02fbba6a019 288 SUPERFAMILY SSF56655 14 248 7.2E-56 T 11-10-2018 ATC04_15145 c8f52da23703abdf9df7f02fbba6a019 288 Gene3D G3DSA:3.30.540.10 10 151 1.1E-37 T 11-10-2018 ATC04_15145 c8f52da23703abdf9df7f02fbba6a019 288 Gene3D G3DSA:3.40.190.80 157 267 2.0E-14 T 11-10-2018 ATC04_15145 c8f52da23703abdf9df7f02fbba6a019 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 2.0E-26 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_15145 c8f52da23703abdf9df7f02fbba6a019 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 222 246 2.0E-26 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_15145 c8f52da23703abdf9df7f02fbba6a019 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 70 86 2.0E-26 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_15145 c8f52da23703abdf9df7f02fbba6a019 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 94 110 2.0E-26 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_15145 c8f52da23703abdf9df7f02fbba6a019 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 191 212 2.0E-26 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_15145 c8f52da23703abdf9df7f02fbba6a019 288 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 94 107 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site ATC04_15145 c8f52da23703abdf9df7f02fbba6a019 288 Pfam PF00459 Inositol monophosphatase family 13 244 4.7E-48 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_12315 1bf278aeea497f36b2ae09d64457dd22 603 SUPERFAMILY SSF103190 99 223 2.79E-28 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ATC04_12315 1bf278aeea497f36b2ae09d64457dd22 603 SUPERFAMILY SSF55874 463 598 1.7E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_12315 1bf278aeea497f36b2ae09d64457dd22 603 Pfam PF17203 Single cache domain 3 96 220 7.8E-20 T 11-10-2018 IPR033463 Single cache domain 3 ATC04_12315 1bf278aeea497f36b2ae09d64457dd22 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 498 600 3.2E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_12315 1bf278aeea497f36b2ae09d64457dd22 603 Gene3D G3DSA:3.30.450.20 92 228 1.1E-34 T 11-10-2018 ATC04_12315 1bf278aeea497f36b2ae09d64457dd22 603 SMART SM00387 493 601 6.9E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_12315 1bf278aeea497f36b2ae09d64457dd22 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 581 3.7E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_12315 1bf278aeea497f36b2ae09d64457dd22 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 546 3.7E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATC04_12315 1bf278aeea497f36b2ae09d64457dd22 603 Gene3D G3DSA:3.30.450.20 258 390 1.7E-12 T 11-10-2018 ATC04_12315 1bf278aeea497f36b2ae09d64457dd22 603 Gene3D G3DSA:3.30.565.10 459 602 2.8E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_12315 1bf278aeea497f36b2ae09d64457dd22 603 Pfam PF13188 PAS domain 273 336 2.2E-7 T 11-10-2018 IPR000014 PAS domain ATC04_12315 1bf278aeea497f36b2ae09d64457dd22 603 SUPERFAMILY SSF55785 267 337 7.04E-6 T 11-10-2018 IPR035965 PAS domain superfamily ATC04_18435 a50e78c7e5e825eddf85885d06b7189a 266 Pfam PF13614 AAA domain 9 187 2.8E-42 T 11-10-2018 IPR025669 AAA domain ATC04_18435 a50e78c7e5e825eddf85885d06b7189a 266 Gene3D G3DSA:3.40.50.300 3 264 3.0E-55 T 11-10-2018 ATC04_18435 a50e78c7e5e825eddf85885d06b7189a 266 SUPERFAMILY SSF52540 8 244 2.03E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03585 212156ae614b7ed99ae9ad59dbaa9250 495 PIRSF PIRSF006060 2 481 7.6E-75 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_03585 212156ae614b7ed99ae9ad59dbaa9250 495 Pfam PF00324 Amino acid permease 24 466 1.5E-105 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ATC04_03585 212156ae614b7ed99ae9ad59dbaa9250 495 ProSitePatterns PS00218 Amino acid permeases signature. 49 79 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ATC04_03585 212156ae614b7ed99ae9ad59dbaa9250 495 Gene3D G3DSA:1.20.1740.10 16 481 3.3E-66 T 11-10-2018 ATC04_16945 bf46b7dbce5459211bc6da789c276dcd 283 Pfam PF09359 VTC domain 36 239 7.1E-12 T 11-10-2018 IPR018966 VTC domain ATC04_16945 bf46b7dbce5459211bc6da789c276dcd 283 Gene3D G3DSA:2.40.320.10 37 212 3.2E-5 T 11-10-2018 ATC04_16945 bf46b7dbce5459211bc6da789c276dcd 283 SUPERFAMILY SSF55154 39 241 8.83E-7 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 ATC04_13195 ac0781c96205d4e97a3b3eb6687864ce 140 SUPERFAMILY SSF75620 9 104 4.32E-12 T 11-10-2018 ATC04_13195 ac0781c96205d4e97a3b3eb6687864ce 140 Pfam PF00472 RF-1 domain 9 134 7.1E-23 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ATC04_13195 ac0781c96205d4e97a3b3eb6687864ce 140 Gene3D G3DSA:3.30.160.20 3 137 4.2E-34 T 11-10-2018 ATC04_14465 5f3a47315747f8de62bd057f3ac7f1f2 376 SUPERFAMILY SSF159283 316 368 1.7E-13 T 11-10-2018 ATC04_14465 5f3a47315747f8de62bd057f3ac7f1f2 376 Pfam PF00483 Nucleotidyl transferase 16 301 9.1E-42 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ATC04_14465 5f3a47315747f8de62bd057f3ac7f1f2 376 Pfam PF01050 Mannose-6-phosphate isomerase 335 374 2.1E-7 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 ATC04_14465 5f3a47315747f8de62bd057f3ac7f1f2 376 SUPERFAMILY SSF53448 14 297 2.17E-53 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_14465 5f3a47315747f8de62bd057f3ac7f1f2 376 Gene3D G3DSA:3.90.550.10 14 370 2.7E-102 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_17190 7d62c1dd8c0c7b1a7f0fbc304b79a1df 236 SUPERFAMILY SSF51695 1 231 1.39E-25 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ATC04_17190 7d62c1dd8c0c7b1a7f0fbc304b79a1df 236 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 1 227 3.5E-9 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ATC04_17190 7d62c1dd8c0c7b1a7f0fbc304b79a1df 236 Gene3D G3DSA:3.20.20.190 1 236 4.2E-26 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ATC04_07115 4f3fe6cda46a188d743169debd7c61bc 308 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 26 279 2.6E-73 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 ATC04_07115 4f3fe6cda46a188d743169debd7c61bc 308 Pfam PF00809 Pterin binding enzyme 27 265 1.5E-61 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATC04_07115 4f3fe6cda46a188d743169debd7c61bc 308 Gene3D G3DSA:3.20.20.20 14 294 9.7E-82 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATC04_07115 4f3fe6cda46a188d743169debd7c61bc 308 SUPERFAMILY SSF51717 15 283 9.68E-79 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATC04_07115 4f3fe6cda46a188d743169debd7c61bc 308 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 26 41 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATC04_07450 1356ab85e72a109edb8d7b2dd78b3458 474 SUPERFAMILY SSF54368 5 103 3.79E-32 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATC04_07450 1356ab85e72a109edb8d7b2dd78b3458 474 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ATC04_07450 1356ab85e72a109edb8d7b2dd78b3458 474 SMART SM01230 104 383 4.5E-152 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATC04_07450 1356ab85e72a109edb8d7b2dd78b3458 474 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 472 3.4E-196 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATC04_07450 1356ab85e72a109edb8d7b2dd78b3458 474 SUPERFAMILY SSF55931 105 473 9.81E-139 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ATC04_07450 1356ab85e72a109edb8d7b2dd78b3458 474 Gene3D G3DSA:3.30.590.10 107 462 2.5E-150 T 11-10-2018 ATC04_07450 1356ab85e72a109edb8d7b2dd78b3458 474 Pfam PF00120 Glutamine synthetase, catalytic domain 105 471 3.3E-135 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATC04_07450 1356ab85e72a109edb8d7b2dd78b3458 474 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 2.2E-25 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ATC04_07450 1356ab85e72a109edb8d7b2dd78b3458 474 Gene3D G3DSA:3.10.20.70 4 106 6.3E-35 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATC04_07450 1356ab85e72a109edb8d7b2dd78b3458 474 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ATC04_05125 f1bc2eff865b3461d3d1b0bd037365f9 667 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 40 94 1.9E-16 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 ATC04_05125 f1bc2eff865b3461d3d1b0bd037365f9 667 ProSitePatterns PS00455 Putative AMP-binding domain signature. 272 283 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_05125 f1bc2eff865b3461d3d1b0bd037365f9 667 Gene3D G3DSA:3.40.50.12780 63 537 5.7E-104 T 11-10-2018 ATC04_05125 f1bc2eff865b3461d3d1b0bd037365f9 667 SUPERFAMILY SSF56801 45 662 1.01E-165 T 11-10-2018 ATC04_05125 f1bc2eff865b3461d3d1b0bd037365f9 667 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 39 663 8.0E-276 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 ATC04_05125 f1bc2eff865b3461d3d1b0bd037365f9 667 Pfam PF00501 AMP-binding enzyme 102 544 4.8E-93 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_05125 f1bc2eff865b3461d3d1b0bd037365f9 667 Gene3D G3DSA:3.30.300.30 540 667 4.1E-29 T 11-10-2018 ATC04_05125 f1bc2eff865b3461d3d1b0bd037365f9 667 Pfam PF13193 AMP-binding enzyme C-terminal domain 553 631 5.3E-26 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ATC04_15765 0b4b936c51b1cc9e1976c7099f67cd12 610 SUPERFAMILY SSF53795 247 609 5.49E-147 T 11-10-2018 ATC04_15765 0b4b936c51b1cc9e1976c7099f67cd12 610 Gene3D G3DSA:3.90.228.20 247 607 8.0E-262 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ATC04_15765 0b4b936c51b1cc9e1976c7099f67cd12 610 PIRSF PIRSF001348 1 610 1.3E-264 T 11-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 ATC04_15765 0b4b936c51b1cc9e1976c7099f67cd12 610 SUPERFAMILY SSF68923 12 246 1.2E-91 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ATC04_15765 0b4b936c51b1cc9e1976c7099f67cd12 610 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 247 608 2.9E-160 T 11-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 ATC04_15765 0b4b936c51b1cc9e1976c7099f67cd12 610 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 11 609 47.438 T 11-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 ATC04_15765 0b4b936c51b1cc9e1976c7099f67cd12 610 Gene3D G3DSA:2.170.8.10 58 402 8.0E-262 T 11-10-2018 ATC04_15765 0b4b936c51b1cc9e1976c7099f67cd12 610 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 23 243 3.6E-98 T 11-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 ATC04_15765 0b4b936c51b1cc9e1976c7099f67cd12 610 Gene3D G3DSA:3.40.449.10 23 246 8.0E-262 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ATC04_15765 0b4b936c51b1cc9e1976c7099f67cd12 610 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 271 279 - T 11-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 ATC04_07630 742e52128182ea3358fd99c63914b13c 288 Gene3D G3DSA:3.90.1200.10 111 286 1.5E-10 T 11-10-2018 ATC04_07630 742e52128182ea3358fd99c63914b13c 288 SUPERFAMILY SSF56112 40 249 1.34E-22 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ATC04_07630 742e52128182ea3358fd99c63914b13c 288 Pfam PF01636 Phosphotransferase enzyme family 44 246 5.7E-15 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ATC04_03605 a19aba54075c89a0733ca21a86232167 213 SUPERFAMILY SSF161098 11 198 5.49E-27 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_03605 a19aba54075c89a0733ca21a86232167 213 Gene3D G3DSA:1.10.3720.10 8 203 7.9E-22 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_03605 a19aba54075c89a0733ca21a86232167 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 198 2.5E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_09225 5dc46c0fd9e1e51bf115ce1488b02916 399 ProSitePatterns PS00789 Chorismate synthase signature 3. 342 358 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATC04_09225 5dc46c0fd9e1e51bf115ce1488b02916 399 SUPERFAMILY SSF103263 2 390 1.44E-138 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATC04_09225 5dc46c0fd9e1e51bf115ce1488b02916 399 Hamap MF_00300 Chorismate synthase [aroC]. 2 375 34.036 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATC04_09225 5dc46c0fd9e1e51bf115ce1488b02916 399 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATC04_09225 5dc46c0fd9e1e51bf115ce1488b02916 399 PIRSF PIRSF001456 1 385 1.9E-124 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATC04_09225 5dc46c0fd9e1e51bf115ce1488b02916 399 Pfam PF01264 Chorismate synthase 2 368 2.5E-117 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATC04_09225 5dc46c0fd9e1e51bf115ce1488b02916 399 TIGRFAM TIGR00033 aroC: chorismate synthase 2 373 3.4E-130 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATC04_09225 5dc46c0fd9e1e51bf115ce1488b02916 399 Gene3D G3DSA:3.60.150.10 1 398 1.9E-158 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATC04_15385 934d5d665d1fd68532159c7d29431f48 481 SUPERFAMILY SSF53756 5 466 9.42E-135 T 11-10-2018 ATC04_15385 934d5d665d1fd68532159c7d29431f48 481 Gene3D G3DSA:3.40.50.2000 30 461 1.7E-161 T 11-10-2018 ATC04_15385 934d5d665d1fd68532159c7d29431f48 481 Gene3D G3DSA:3.40.50.2000 242 450 1.7E-161 T 11-10-2018 ATC04_15385 934d5d665d1fd68532159c7d29431f48 481 Pfam PF00982 Glycosyltransferase family 20 6 465 2.1E-140 T 11-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 ATC04_11490 e427944b3ea38d5331622f4d57251e70 365 Gene3D G3DSA:4.10.1270.10 291 365 4.1E-42 T 11-10-2018 ATC04_11490 e427944b3ea38d5331622f4d57251e70 365 SUPERFAMILY SSF54593 11 336 2.97E-45 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_11490 e427944b3ea38d5331622f4d57251e70 365 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 152 268 5.7E-11 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_11490 e427944b3ea38d5331622f4d57251e70 365 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 104 7.8E-8 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_11490 e427944b3ea38d5331622f4d57251e70 365 TIGRFAM TIGR02295 HpaD: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 14 309 1.2E-142 T 11-10-2018 IPR011981 3,4-dihydroxyphenylacetate 2,3-dioxygenase, Mn/Fe-type ATC04_11490 e427944b3ea38d5331622f4d57251e70 365 Gene3D G3DSA:3.10.180.10 152 290 3.7E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_11490 e427944b3ea38d5331622f4d57251e70 365 Gene3D G3DSA:3.10.180.10 4 151 2.3E-58 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_15190 494c39289fb7e4d46aa69985a0e09ae6 222 Pfam PF04978 Protein of unknown function (DUF664) 35 185 7.0E-33 T 11-10-2018 IPR007061 Protein of unknown function DUF664 ATC04_15190 494c39289fb7e4d46aa69985a0e09ae6 222 SUPERFAMILY SSF109854 15 184 1.83E-30 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_15190 494c39289fb7e4d46aa69985a0e09ae6 222 Gene3D G3DSA:1.20.120.450 13 188 2.0E-25 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_14410 0346ac0260149c51e89677e93cce4365 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ATC04_14410 0346ac0260149c51e89677e93cce4365 496 Pfam PF00171 Aldehyde dehydrogenase family 25 484 3.3E-158 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_14410 0346ac0260149c51e89677e93cce4365 496 SUPERFAMILY SSF53720 15 488 1.96E-153 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_14410 0346ac0260149c51e89677e93cce4365 496 Gene3D G3DSA:3.40.605.10 21 480 4.3E-159 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_14410 0346ac0260149c51e89677e93cce4365 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 291 302 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ATC04_14410 0346ac0260149c51e89677e93cce4365 496 Gene3D G3DSA:3.40.309.10 268 455 4.3E-159 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_05445 ab1c8203e10b01d085fc633f48d81c02 328 Pfam PF05138 Phenylacetic acid catabolic protein 36 310 3.1E-96 T 11-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 ATC04_05445 ab1c8203e10b01d085fc633f48d81c02 328 Gene3D G3DSA:1.20.1260.10 19 328 5.0E-125 T 11-10-2018 IPR012347 Ferritin-like ATC04_05445 ab1c8203e10b01d085fc633f48d81c02 328 SUPERFAMILY SSF47240 46 288 5.68E-74 T 11-10-2018 IPR009078 Ferritin-like superfamily ATC04_05445 ab1c8203e10b01d085fc633f48d81c02 328 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 26 314 1.4E-146 T 11-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 ATC04_16750 7b2598e458495c14f23df13b15e21c69 344 Gene3D G3DSA:3.40.50.1980 68 176 6.7E-36 T 11-10-2018 ATC04_16750 7b2598e458495c14f23df13b15e21c69 344 SUPERFAMILY SSF53807 73 338 4.71E-64 T 11-10-2018 ATC04_16750 7b2598e458495c14f23df13b15e21c69 344 Gene3D G3DSA:3.40.50.1980 182 344 7.1E-47 T 11-10-2018 ATC04_16750 7b2598e458495c14f23df13b15e21c69 344 Pfam PF01497 Periplasmic binding protein 91 319 7.6E-27 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ATC04_09785 17d0e7ada77855774b7e59f432bddb61 285 SUPERFAMILY SSF54637 176 280 1.49E-16 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_09785 17d0e7ada77855774b7e59f432bddb61 285 Gene3D G3DSA:3.10.129.10 33 283 1.0E-61 T 11-10-2018 ATC04_09785 17d0e7ada77855774b7e59f432bddb61 285 Pfam PF01575 MaoC like domain 175 259 1.5E-10 T 11-10-2018 IPR002539 MaoC-like dehydratase domain ATC04_03935 42dcc7320306fa2b83a7369fc397db39 335 Pfam PF00248 Aldo/keto reductase family 19 320 7.6E-48 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain ATC04_03935 42dcc7320306fa2b83a7369fc397db39 335 Gene3D G3DSA:3.20.20.100 16 315 1.2E-58 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ATC04_03935 42dcc7320306fa2b83a7369fc397db39 335 SUPERFAMILY SSF51430 19 322 4.32E-55 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ATC04_04475 65e1de682fa4664fce2b0008c51bed28 262 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 6 178 6.0E-25 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain ATC04_04475 65e1de682fa4664fce2b0008c51bed28 262 SUPERFAMILY SSF52266 3 188 9.16E-38 T 11-10-2018 ATC04_04475 65e1de682fa4664fce2b0008c51bed28 262 Gene3D G3DSA:3.40.50.1110 1 190 4.8E-30 T 11-10-2018 IPR036514 SGNH hydrolase superfamily ATC04_13190 86aa0209e2b9d2ac5f1c6041d6293600 184 SUPERFAMILY SSF52218 4 175 7.16E-37 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ATC04_13190 86aa0209e2b9d2ac5f1c6041d6293600 184 Pfam PF03358 NADPH-dependent FMN reductase 3 150 9.7E-34 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ATC04_13190 86aa0209e2b9d2ac5f1c6041d6293600 184 Gene3D G3DSA:3.40.50.360 2 184 5.2E-42 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ATC04_00325 39351252b88d3d9f67f38c6608d8de02 108 Pfam PF00581 Rhodanese-like domain 14 92 1.4E-13 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_00325 39351252b88d3d9f67f38c6608d8de02 108 SUPERFAMILY SSF52821 14 100 1.7E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_00325 39351252b88d3d9f67f38c6608d8de02 108 Gene3D G3DSA:3.40.250.10 4 103 9.1E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_00325 39351252b88d3d9f67f38c6608d8de02 108 SMART SM00450 2 96 5.7E-17 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_15725 207d757105206072556cc3276d7f469d 706 SMART SM00490 264 345 1.9E-24 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_15725 207d757105206072556cc3276d7f469d 706 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 27 361 1.8E-70 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 ATC04_15725 207d757105206072556cc3276d7f469d 706 Pfam PF00271 Helicase conserved C-terminal domain 247 344 6.4E-15 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_15725 207d757105206072556cc3276d7f469d 706 Gene3D G3DSA:3.40.50.300 7 215 5.7E-55 T 11-10-2018 ATC04_15725 207d757105206072556cc3276d7f469d 706 SMART SM00487 24 228 2.3E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_15725 207d757105206072556cc3276d7f469d 706 SUPERFAMILY SSF52540 74 365 6.64E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15725 207d757105206072556cc3276d7f469d 706 Pfam PF00270 DEAD/DEAH box helicase 31 201 5.9E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATC04_15725 207d757105206072556cc3276d7f469d 706 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 150 159 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site ATC04_00840 b2a4f295aa1242b0f5e831f3bf98a807 271 Gene3D G3DSA:3.40.1190.20 9 268 2.3E-58 T 11-10-2018 IPR029056 Ribokinase-like ATC04_00840 b2a4f295aa1242b0f5e831f3bf98a807 271 SUPERFAMILY SSF53613 15 261 3.59E-47 T 11-10-2018 IPR029056 Ribokinase-like ATC04_00840 b2a4f295aa1242b0f5e831f3bf98a807 271 Pfam PF08543 Phosphomethylpyrimidine kinase 86 264 5.8E-23 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 ATC04_01315 3921b7856f5f17262cd493e96b608a00 388 Gene3D G3DSA:3.30.530.90 156 387 2.1E-88 T 11-10-2018 ATC04_01315 3921b7856f5f17262cd493e96b608a00 388 Pfam PF00355 Rieske [2Fe-2S] domain 26 108 1.1E-19 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATC04_01315 3921b7856f5f17262cd493e96b608a00 388 SUPERFAMILY SSF55961 123 360 1.68E-27 T 11-10-2018 ATC04_01315 3921b7856f5f17262cd493e96b608a00 388 SUPERFAMILY SSF50022 20 133 7.99E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ATC04_01315 3921b7856f5f17262cd493e96b608a00 388 Gene3D G3DSA:2.102.10.10 21 155 8.2E-47 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ATC04_13780 730449ca9b8bea1cf312fcee9d03d75f 636 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 31 147 4.2E-5 T 11-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 ATC04_13780 730449ca9b8bea1cf312fcee9d03d75f 636 SUPERFAMILY SSF56601 289 635 1.23E-59 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ATC04_13780 730449ca9b8bea1cf312fcee9d03d75f 636 Gene3D G3DSA:3.40.710.10 334 636 1.1E-61 T 11-10-2018 ATC04_13780 730449ca9b8bea1cf312fcee9d03d75f 636 SUPERFAMILY SSF56519 152 337 4.84E-26 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ATC04_13780 730449ca9b8bea1cf312fcee9d03d75f 636 Pfam PF00905 Penicillin binding protein transpeptidase domain 358 632 5.8E-33 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ATC04_13780 730449ca9b8bea1cf312fcee9d03d75f 636 Gene3D G3DSA:3.90.1310.30 152 333 4.3E-22 T 11-10-2018 ATC04_13780 730449ca9b8bea1cf312fcee9d03d75f 636 Pfam PF03717 Penicillin-binding Protein dimerisation domain 154 316 2.0E-18 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ATC04_10635 97deaa0d467a7dd170c031e335a927bd 197 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 192 2.4E-39 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 ATC04_10635 97deaa0d467a7dd170c031e335a927bd 197 Gene3D G3DSA:3.40.50.150 1 194 2.1E-53 T 11-10-2018 ATC04_10635 97deaa0d467a7dd170c031e335a927bd 197 PIRSF PIRSF004553 1 194 3.5E-45 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 ATC04_10635 97deaa0d467a7dd170c031e335a927bd 197 SUPERFAMILY SSF53335 2 191 1.04E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_10635 97deaa0d467a7dd170c031e335a927bd 197 Pfam PF03602 Conserved hypothetical protein 95 3 191 1.4E-46 T 11-10-2018 ATC04_10635 97deaa0d467a7dd170c031e335a927bd 197 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 128 134 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ATC04_00320 df6df169cc9562974f74fbc666485860 307 Pfam PF00800 Prephenate dehydratase 4 183 6.6E-46 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ATC04_00320 df6df169cc9562974f74fbc666485860 307 Gene3D G3DSA:3.30.70.260 186 281 7.6E-31 T 11-10-2018 ATC04_00320 df6df169cc9562974f74fbc666485860 307 Gene3D G3DSA:3.40.190.10 90 172 3.0E-24 T 11-10-2018 ATC04_00320 df6df169cc9562974f74fbc666485860 307 SUPERFAMILY SSF55021 178 275 8.51E-22 T 11-10-2018 ATC04_00320 df6df169cc9562974f74fbc666485860 307 Pfam PF01842 ACT domain 198 259 2.5E-8 T 11-10-2018 IPR002912 ACT domain ATC04_00320 df6df169cc9562974f74fbc666485860 307 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 224 231 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ATC04_00320 df6df169cc9562974f74fbc666485860 307 Gene3D G3DSA:3.40.190.10 1 89 4.9E-32 T 11-10-2018 ATC04_00320 df6df169cc9562974f74fbc666485860 307 PIRSF PIRSF001500 1 278 2.6E-55 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ATC04_00320 df6df169cc9562974f74fbc666485860 307 SUPERFAMILY SSF53850 1 190 1.93E-45 T 11-10-2018 ATC04_07655 428fca1ccb4090730a85c1432c6c06b3 350 SUPERFAMILY SSF53474 9 347 1.66E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_07655 428fca1ccb4090730a85c1432c6c06b3 350 Pfam PF00561 alpha/beta hydrolase fold 42 149 1.8E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_07655 428fca1ccb4090730a85c1432c6c06b3 350 Gene3D G3DSA:3.40.50.1820 3 350 2.1E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_05365 dee033f7a20b99c7d6d649fe9729ff4b 301 Pfam PF01163 RIO1 family 123 285 5.8E-30 T 11-10-2018 ATC04_05365 dee033f7a20b99c7d6d649fe9729ff4b 301 SUPERFAMILY SSF56112 80 279 8.36E-18 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ATC04_05365 dee033f7a20b99c7d6d649fe9729ff4b 301 Gene3D G3DSA:3.30.200.20 79 189 1.2E-5 T 11-10-2018 ATC04_05365 dee033f7a20b99c7d6d649fe9729ff4b 301 Gene3D G3DSA:1.10.510.10 198 300 1.6E-18 T 11-10-2018 ATC04_05365 dee033f7a20b99c7d6d649fe9729ff4b 301 SMART SM00090 72 297 4.2E-9 T 11-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 ATC04_01935 69542c5a9432983ab347ad77b7e01591 326 Gene3D G3DSA:1.10.3470.10 6 324 7.5E-62 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_01935 69542c5a9432983ab347ad77b7e01591 326 SUPERFAMILY SSF81345 13 321 2.22E-63 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_01935 69542c5a9432983ab347ad77b7e01591 326 Pfam PF01032 FecCD transport family 26 321 7.0E-62 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ATC04_10360 d6dda851c4008092f1a7f1af8ce3140b 653 Gene3D G3DSA:2.40.10.10 348 446 3.4E-15 T 11-10-2018 ATC04_10360 d6dda851c4008092f1a7f1af8ce3140b 653 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 252 257 - T 11-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 ATC04_10360 d6dda851c4008092f1a7f1af8ce3140b 653 Gene3D G3DSA:2.40.10.10 226 281 1.3E-5 T 11-10-2018 ATC04_10360 d6dda851c4008092f1a7f1af8ce3140b 653 SUPERFAMILY SSF50494 232 456 2.05E-18 T 11-10-2018 IPR009003 Peptidase S1, PA clan ATC04_01165 466a6b7989eb8c1d9ea27e2c1a546f64 573 SUPERFAMILY SSF51905 13 565 4.83E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_01165 466a6b7989eb8c1d9ea27e2c1a546f64 573 Pfam PF00890 FAD binding domain 18 547 3.2E-86 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_01165 466a6b7989eb8c1d9ea27e2c1a546f64 573 SUPERFAMILY SSF56425 327 503 6.28E-27 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 9.8E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 9.8E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 9.8E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 Gene3D G3DSA:3.40.50.720 3 252 9.3E-68 T 11-10-2018 ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 SUPERFAMILY SSF51735 11 251 1.45E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 11 252 2.0E-93 T 11-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 3.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03520 1fa1ee50b821416db8209e83f973f1b2 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 7.5E-46 T 11-10-2018 ATC04_15575 47cf149db959324cb9b8f0fec66cc17f 407 Pfam PF04860 Phage portal protein 58 380 1.7E-59 T 11-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein ATC04_15575 47cf149db959324cb9b8f0fec66cc17f 407 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 49 386 7.7E-45 T 11-10-2018 IPR006427 Phage portal protein, HK97 ATC04_04775 68697cf32c93bcc27ff4092d4b2c2045 692 Pfam PF05425 Copper resistance protein D 256 354 8.2E-13 T 11-10-2018 IPR008457 Copper resistance protein D GO:0016021 ATC04_04775 68697cf32c93bcc27ff4092d4b2c2045 692 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 408 652 1.8E-73 T 11-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related ATC04_12335 39ee03b2592cc411a64abfd4d3be1e09 214 Gene3D G3DSA:1.10.10.10 1 67 8.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_12335 39ee03b2592cc411a64abfd4d3be1e09 214 Pfam PF07729 FCD domain 75 199 1.6E-16 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_12335 39ee03b2592cc411a64abfd4d3be1e09 214 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 65 4.3E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_12335 39ee03b2592cc411a64abfd4d3be1e09 214 SUPERFAMILY SSF48008 71 205 9.15E-17 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_12335 39ee03b2592cc411a64abfd4d3be1e09 214 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 1.6E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_12335 39ee03b2592cc411a64abfd4d3be1e09 214 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 1.6E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_12335 39ee03b2592cc411a64abfd4d3be1e09 214 Gene3D G3DSA:1.20.120.530 70 210 5.6E-21 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_12335 39ee03b2592cc411a64abfd4d3be1e09 214 SMART SM00345 7 65 1.2E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_12335 39ee03b2592cc411a64abfd4d3be1e09 214 SMART SM00895 75 200 2.2E-4 T 11-10-2018 IPR011711 GntR, C-terminal ATC04_12335 39ee03b2592cc411a64abfd4d3be1e09 214 SUPERFAMILY SSF46785 3 69 5.95E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_15490 4824c44f83c4c5619d4255dbce03384a 217 SUPERFAMILY SSF109755 2 212 7.01E-52 T 11-10-2018 ATC04_15490 4824c44f83c4c5619d4255dbce03384a 217 Pfam PF01895 PhoU domain 122 203 5.9E-10 T 11-10-2018 IPR026022 PhoU domain ATC04_15490 4824c44f83c4c5619d4255dbce03384a 217 Pfam PF01895 PhoU domain 16 103 9.9E-19 T 11-10-2018 IPR026022 PhoU domain ATC04_15490 4824c44f83c4c5619d4255dbce03384a 217 Gene3D G3DSA:1.20.58.220 1 213 2.1E-54 T 11-10-2018 IPR038078 PhoU-like domain superfamily ATC04_15490 4824c44f83c4c5619d4255dbce03384a 217 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 5 211 3.2E-52 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 ATC04_15490 4824c44f83c4c5619d4255dbce03384a 217 PIRSF PIRSF003107 1 216 3.2E-49 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 ATC04_10525 2fed9399b0aa79b9fc96ae4bea04fc63 1189 PIRSF PIRSF005719 1 1189 1.4E-238 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein ATC04_10525 2fed9399b0aa79b9fc96ae4bea04fc63 1189 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 3 1184 1.3E-261 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 ATC04_10525 2fed9399b0aa79b9fc96ae4bea04fc63 1189 SUPERFAMILY SSF75553 473 638 1.16E-15 T 11-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 ATC04_10525 2fed9399b0aa79b9fc96ae4bea04fc63 1189 Pfam PF06470 SMC proteins Flexible Hinge Domain 513 619 7.9E-15 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 ATC04_10525 2fed9399b0aa79b9fc96ae4bea04fc63 1189 Gene3D G3DSA:3.40.50.300 1 236 1.5E-52 T 11-10-2018 ATC04_10525 2fed9399b0aa79b9fc96ae4bea04fc63 1189 Gene3D G3DSA:3.40.50.300 952 1188 3.7E-45 T 11-10-2018 ATC04_10525 2fed9399b0aa79b9fc96ae4bea04fc63 1189 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1177 5.9E-71 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal ATC04_10525 2fed9399b0aa79b9fc96ae4bea04fc63 1189 SMART SM00968 510 620 1.9E-9 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 ATC04_10525 2fed9399b0aa79b9fc96ae4bea04fc63 1189 SUPERFAMILY SSF52540 3 381 1.38E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10525 2fed9399b0aa79b9fc96ae4bea04fc63 1189 SUPERFAMILY SSF52540 2 1177 2.95E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10525 2fed9399b0aa79b9fc96ae4bea04fc63 1189 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1186 21.813 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 ATC04_09020 0251394579eccea861d22507b018ae67 393 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 329 338 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 ATC04_09020 0251394579eccea861d22507b018ae67 393 SUPERFAMILY SSF48264 34 380 7.33E-37 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_09020 0251394579eccea861d22507b018ae67 393 PRINTS PR00359 B-class P450 signature 327 336 4.8E-11 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_09020 0251394579eccea861d22507b018ae67 393 PRINTS PR00359 B-class P450 signature 136 152 4.8E-11 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_09020 0251394579eccea861d22507b018ae67 393 PRINTS PR00359 B-class P450 signature 336 347 4.8E-11 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_09020 0251394579eccea861d22507b018ae67 393 PRINTS PR00359 B-class P450 signature 86 97 4.8E-11 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_09020 0251394579eccea861d22507b018ae67 393 PRINTS PR00359 B-class P450 signature 153 168 4.8E-11 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_09020 0251394579eccea861d22507b018ae67 393 Gene3D G3DSA:1.10.630.10 17 391 2.3E-43 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 SUPERFAMILY SSF103491 2 424 1.2E-120 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 PIRSF PIRSF004557 1 434 2.4E-117 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 ProSitePatterns PS00756 Protein secY signature 2. 174 191 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 429 4.7E-130 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 Gene3D G3DSA:1.10.3370.10 1 429 5.7E-156 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 433 28.783 T 11-10-2018 IPR026593 Protein translocase subunit SecY ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 72 92 3.9E-99 T 11-10-2018 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 268 287 3.9E-99 T 11-10-2018 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 181 204 3.9E-99 T 11-10-2018 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 3.9E-99 T 11-10-2018 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 113 136 3.9E-99 T 11-10-2018 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 155 180 3.9E-99 T 11-10-2018 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 313 335 3.9E-99 T 11-10-2018 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 368 386 3.9E-99 T 11-10-2018 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 3.9E-99 T 11-10-2018 ATC04_06220 3896b6ae82ef1c0708a0182831ee96bb 434 Pfam PF00344 SecY translocase 73 417 6.5E-113 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATC04_16475 d2e5b92d9ccaa830a029dd9ff4404d2b 224 Gene3D G3DSA:3.40.50.2300 5 130 1.4E-19 T 11-10-2018 ATC04_16475 d2e5b92d9ccaa830a029dd9ff4404d2b 224 SMART SM00448 9 117 1.8E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_16475 d2e5b92d9ccaa830a029dd9ff4404d2b 224 SUPERFAMILY SSF52172 8 149 8.11E-24 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_16475 d2e5b92d9ccaa830a029dd9ff4404d2b 224 Pfam PF00072 Response regulator receiver domain 11 117 2.2E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_16475 d2e5b92d9ccaa830a029dd9ff4404d2b 224 Gene3D G3DSA:1.10.10.10 163 211 3.8E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16475 d2e5b92d9ccaa830a029dd9ff4404d2b 224 SUPERFAMILY SSF46785 164 206 1.15E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_16475 d2e5b92d9ccaa830a029dd9ff4404d2b 224 Pfam PF09339 IclR helix-turn-helix domain 164 206 1.8E-8 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_16475 d2e5b92d9ccaa830a029dd9ff4404d2b 224 PIRSF PIRSF006171 8 224 5.4E-57 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 ATC04_10515 f6362afd38160a74293e387e3936f023 412 Pfam PF07690 Major Facilitator Superfamily 22 256 1.2E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_10515 f6362afd38160a74293e387e3936f023 412 SUPERFAMILY SSF103473 19 409 1.12E-63 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_10515 f6362afd38160a74293e387e3936f023 412 Gene3D G3DSA:1.20.1250.20 222 412 4.8E-28 T 11-10-2018 ATC04_10515 f6362afd38160a74293e387e3936f023 412 PRINTS PR01035 Tetracycline resistance protein signature 28 44 1.3E-10 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_10515 f6362afd38160a74293e387e3936f023 412 PRINTS PR01035 Tetracycline resistance protein signature 264 284 1.3E-10 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_10515 f6362afd38160a74293e387e3936f023 412 PRINTS PR01035 Tetracycline resistance protein signature 143 165 1.3E-10 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_10515 f6362afd38160a74293e387e3936f023 412 PRINTS PR01035 Tetracycline resistance protein signature 353 376 1.3E-10 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_10515 f6362afd38160a74293e387e3936f023 412 Gene3D G3DSA:1.20.1250.20 19 210 3.1E-30 T 11-10-2018 ATC04_15825 c9eb1bb4f0b489038af09abc757d7463 202 SUPERFAMILY SSF46689 8 81 3.44E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_15825 c9eb1bb4f0b489038af09abc757d7463 202 SUPERFAMILY SSF48498 85 148 3.05E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_15825 c9eb1bb4f0b489038af09abc757d7463 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 2.7E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_15825 c9eb1bb4f0b489038af09abc757d7463 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 2.7E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_15825 c9eb1bb4f0b489038af09abc757d7463 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 7.7E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_15825 c9eb1bb4f0b489038af09abc757d7463 202 Gene3D G3DSA:1.10.357.10 4 201 1.4E-33 T 11-10-2018 ATC04_06295 f433bd66246061615c2dad5abb6db62c 344 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 241 297 6.3E-5 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 ATC04_06295 f433bd66246061615c2dad5abb6db62c 344 Gene3D G3DSA:3.40.50.2000 169 315 1.7E-11 T 11-10-2018 ATC04_06295 f433bd66246061615c2dad5abb6db62c 344 SUPERFAMILY SSF53756 9 299 3.45E-11 T 11-10-2018 ATC04_09445 ef4d235551bec477506d21bae0938628 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 36 146 2.7E-32 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ATC04_09445 ef4d235551bec477506d21bae0938628 157 Gene3D G3DSA:3.40.390.30 1 153 1.9E-38 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 ATC04_09445 ef4d235551bec477506d21bae0938628 157 SUPERFAMILY SSF55486 3 146 5.86E-38 T 11-10-2018 ATC04_09445 ef4d235551bec477506d21bae0938628 157 Pfam PF02130 Uncharacterized protein family UPF0054 18 145 1.7E-37 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ATC04_09445 ef4d235551bec477506d21bae0938628 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 116 126 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site ATC04_09445 ef4d235551bec477506d21bae0938628 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 151 21.273 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ATC04_14120 e7e3a0ea799db46edd3f2dcceb797c53 293 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 23 280 2.5E-70 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ATC04_14120 e7e3a0ea799db46edd3f2dcceb797c53 293 Pfam PF00398 Ribosomal RNA adenine dimethylase 27 279 2.7E-40 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm ATC04_14120 e7e3a0ea799db46edd3f2dcceb797c53 293 SMART SM00650 39 212 1.6E-58 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 ATC04_14120 e7e3a0ea799db46edd3f2dcceb797c53 293 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 55 82 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 ATC04_14120 e7e3a0ea799db46edd3f2dcceb797c53 293 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 23 283 47.206 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ATC04_14120 e7e3a0ea799db46edd3f2dcceb797c53 293 SUPERFAMILY SSF53335 22 286 3.23E-61 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_14120 e7e3a0ea799db46edd3f2dcceb797c53 293 Gene3D G3DSA:3.40.50.150 2 214 3.2E-54 T 11-10-2018 ATC04_14120 e7e3a0ea799db46edd3f2dcceb797c53 293 Gene3D G3DSA:1.10.8.100 219 285 8.3E-18 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 ATC04_03715 5b430bacd9f2f668b68ca9d1b4d89138 162 Gene3D G3DSA:1.10.10.10 6 66 1.7E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03715 5b430bacd9f2f668b68ca9d1b4d89138 162 SMART SM00344 15 124 2.3E-31 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATC04_03715 5b430bacd9f2f668b68ca9d1b4d89138 162 SUPERFAMILY SSF54909 78 155 4.69E-12 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_03715 5b430bacd9f2f668b68ca9d1b4d89138 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 15 61 7.9E-15 T 11-10-2018 ATC04_03715 5b430bacd9f2f668b68ca9d1b4d89138 162 SUPERFAMILY SSF46785 14 74 4.05E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03715 5b430bacd9f2f668b68ca9d1b4d89138 162 Pfam PF01037 Lrp/AsnC ligand binding domain 82 154 3.4E-13 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATC04_03715 5b430bacd9f2f668b68ca9d1b4d89138 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 42 61 4.7E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_03715 5b430bacd9f2f668b68ca9d1b4d89138 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 42 4.7E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_03715 5b430bacd9f2f668b68ca9d1b4d89138 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 15 31 4.7E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_03715 5b430bacd9f2f668b68ca9d1b4d89138 162 Gene3D G3DSA:3.30.70.920 68 151 3.5E-18 T 11-10-2018 ATC04_17365 6465b348735eb558a95aa6ba1fb819b7 233 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 8 233 34.932 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ATC04_17365 6465b348735eb558a95aa6ba1fb819b7 233 SUPERFAMILY SSF53335 5 229 1.67E-49 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_17365 6465b348735eb558a95aa6ba1fb819b7 233 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 17 233 2.0E-71 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ATC04_17365 6465b348735eb558a95aa6ba1fb819b7 233 Pfam PF01209 ubiE/COQ5 methyltransferase family 13 233 7.4E-65 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ATC04_17365 6465b348735eb558a95aa6ba1fb819b7 233 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 141 155 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 ATC04_17365 6465b348735eb558a95aa6ba1fb819b7 233 Gene3D G3DSA:3.40.50.150 23 233 1.9E-63 T 11-10-2018 ATC04_16995 2cfa4264b635663754cb71e26d1054c8 137 PIRSF PIRSF017349 1 136 8.6E-51 T 11-10-2018 IPR014487 Protein of unknown function DUF3151 ATC04_16995 2cfa4264b635663754cb71e26d1054c8 137 Pfam PF11349 Protein of unknown function (DUF3151) 9 132 2.9E-55 T 11-10-2018 IPR014487 Protein of unknown function DUF3151 ATC04_14475 fad57cd56373d45193d392e6d194890a 147 Gene3D G3DSA:1.20.1300.10 22 135 4.0E-22 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14475 fad57cd56373d45193d392e6d194890a 147 SUPERFAMILY SSF81343 12 140 1.16E-33 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_14475 fad57cd56373d45193d392e6d194890a 147 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 26 126 6.4E-16 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_06495 2dc155bd46ad393b5ec4a5ff92ceb43e 406 SUPERFAMILY SSF53383 7 401 5.26E-94 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_06495 2dc155bd46ad393b5ec4a5ff92ceb43e 406 Gene3D G3DSA:3.90.1150.10 22 398 8.8E-138 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_06495 2dc155bd46ad393b5ec4a5ff92ceb43e 406 Pfam PF00155 Aminotransferase class I and II 36 385 2.9E-49 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATC04_06495 2dc155bd46ad393b5ec4a5ff92ceb43e 406 Gene3D G3DSA:3.40.640.10 53 294 8.8E-138 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_06075 fbcf1a49971eab7d7c4650fb6f95e0a6 124 PIRSF PIRSF002133 1 124 3.0E-52 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06075 fbcf1a49971eab7d7c4650fb6f95e0a6 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.2E-57 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06075 fbcf1a49971eab7d7c4650fb6f95e0a6 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.2E-57 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06075 fbcf1a49971eab7d7c4650fb6f95e0a6 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.2E-57 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06075 fbcf1a49971eab7d7c4650fb6f95e0a6 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.2E-57 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06075 fbcf1a49971eab7d7c4650fb6f95e0a6 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.2E-57 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06075 fbcf1a49971eab7d7c4650fb6f95e0a6 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.2E-57 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06075 fbcf1a49971eab7d7c4650fb6f95e0a6 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 124 39.263 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06075 fbcf1a49971eab7d7c4650fb6f95e0a6 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 122 1.4E-65 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06075 fbcf1a49971eab7d7c4650fb6f95e0a6 124 SUPERFAMILY SSF50249 2 122 1.54E-51 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_06075 fbcf1a49971eab7d7c4650fb6f95e0a6 124 Gene3D G3DSA:2.40.50.140 1 124 9.3E-61 T 11-10-2018 ATC04_06075 fbcf1a49971eab7d7c4650fb6f95e0a6 124 Pfam PF00164 Ribosomal protein S12/S23 13 121 1.7E-42 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06075 fbcf1a49971eab7d7c4650fb6f95e0a6 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06505 6d27092db59b9ebe4300e2c4b7798811 287 PIRSF PIRSF028756 14 285 5.1E-67 T 11-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 ATC04_06505 6d27092db59b9ebe4300e2c4b7798811 287 SUPERFAMILY SSF52540 74 263 8.91E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06505 6d27092db59b9ebe4300e2c4b7798811 287 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 37 279 2.0E-95 T 11-10-2018 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 KEGG: 00190+2.7.4.1 ATC04_06505 6d27092db59b9ebe4300e2c4b7798811 287 Gene3D G3DSA:3.40.50.300 2 286 2.6E-96 T 11-10-2018 ATC04_06505 6d27092db59b9ebe4300e2c4b7798811 287 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 38 263 1.3E-63 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related ATC04_00485 77e38167bb0d32a35d5fb958ccd1d908 232 SUPERFAMILY SSF53474 7 229 5.61E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_00485 77e38167bb0d32a35d5fb958ccd1d908 232 Pfam PF01738 Dienelactone hydrolase family 21 229 6.9E-49 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 ATC04_00485 77e38167bb0d32a35d5fb958ccd1d908 232 Gene3D G3DSA:3.40.50.1820 2 231 2.4E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_11930 fe8006991a32df8bcfc3df08ee72dc38 285 Gene3D G3DSA:3.40.50.300 2 251 2.9E-54 T 11-10-2018 ATC04_11930 fe8006991a32df8bcfc3df08ee72dc38 285 SUPERFAMILY SSF52540 3 227 1.13E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11930 fe8006991a32df8bcfc3df08ee72dc38 285 Pfam PF00005 ABC transporter 24 167 7.9E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_11930 fe8006991a32df8bcfc3df08ee72dc38 285 SMART SM00382 31 217 1.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_11545 041009a041719499eabfd0128cace7f2 531 SUPERFAMILY SSF160964 39 278 1.57E-54 T 11-10-2018 ATC04_11545 041009a041719499eabfd0128cace7f2 531 Pfam PF16296 N-terminal of TM subunit in PBP-dependent ABC transporters 98 174 1.6E-21 T 11-10-2018 IPR032550 PBP-dependent ABC transporters TM subunit, N-terminal ATC04_11545 041009a041719499eabfd0128cace7f2 531 Gene3D G3DSA:1.10.3720.10 276 529 5.5E-64 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_11545 041009a041719499eabfd0128cace7f2 531 SUPERFAMILY SSF161098 279 518 1.7E-57 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_11545 041009a041719499eabfd0128cace7f2 531 Gene3D G3DSA:1.20.58.370 31 120 4.7E-5 T 11-10-2018 IPR035277 MalF, N-terminal ATC04_11545 041009a041719499eabfd0128cace7f2 531 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 315 519 4.0E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_09870 8d22d9efef3d5eca27efa89868e3df5d 85 Gene3D G3DSA:2.30.170.50 1 84 3.0E-27 T 11-10-2018 ATC04_09870 8d22d9efef3d5eca27efa89868e3df5d 85 Pfam PF01197 Ribosomal protein L31 1 79 1.4E-29 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_09870 8d22d9efef3d5eca27efa89868e3df5d 85 SUPERFAMILY SSF143800 1 81 8.63E-22 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_09870 8d22d9efef3d5eca27efa89868e3df5d 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 25.092 T 11-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_09870 8d22d9efef3d5eca27efa89868e3df5d 85 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_09870 8d22d9efef3d5eca27efa89868e3df5d 85 PRINTS PR01249 Ribosomal protein L31 signature 45 60 5.5E-18 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_09870 8d22d9efef3d5eca27efa89868e3df5d 85 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.5E-18 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_09870 8d22d9efef3d5eca27efa89868e3df5d 85 PRINTS PR01249 Ribosomal protein L31 signature 60 78 5.5E-18 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_09870 8d22d9efef3d5eca27efa89868e3df5d 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 1.2E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_10595 f94937df328abe74fbba733823d361d5 345 Gene3D G3DSA:3.90.550.10 2 218 3.1E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_10595 f94937df328abe74fbba733823d361d5 345 Pfam PF00535 Glycosyl transferase family 2 9 174 9.6E-19 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATC04_10595 f94937df328abe74fbba733823d361d5 345 SUPERFAMILY SSF53448 3 246 1.03E-39 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_03580 da3532b91b3800c7206d2f6fefdd1016 255 Gene3D G3DSA:3.90.850.10 1 254 1.4E-59 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_03580 da3532b91b3800c7206d2f6fefdd1016 255 SUPERFAMILY SSF56529 1 254 3.4E-46 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_03580 da3532b91b3800c7206d2f6fefdd1016 255 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 81 229 1.7E-7 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ATC04_02540 e16a7a46d1479ee599a954957e89933c 448 Gene3D G3DSA:1.20.1250.20 217 426 3.2E-16 T 11-10-2018 ATC04_02540 e16a7a46d1479ee599a954957e89933c 448 SUPERFAMILY SSF103473 2 426 7.85E-50 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_02540 e16a7a46d1479ee599a954957e89933c 448 Pfam PF07690 Major Facilitator Superfamily 2 376 6.0E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_02540 e16a7a46d1479ee599a954957e89933c 448 Gene3D G3DSA:1.20.1720.10 1 186 1.3E-34 T 11-10-2018 ATC04_15230 a85de5be3bf6967c12d06cad1930893d 793 Pfam PF13361 UvrD-like helicase C-terminal domain 303 651 2.0E-65 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ATC04_15230 a85de5be3bf6967c12d06cad1930893d 793 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 23 790 2.8E-285 T 11-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 ATC04_15230 a85de5be3bf6967c12d06cad1930893d 793 Pfam PF00580 UvrD/REP helicase N-terminal domain 27 298 1.4E-78 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ATC04_15230 a85de5be3bf6967c12d06cad1930893d 793 SUPERFAMILY SSF52540 21 678 4.28E-177 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15230 a85de5be3bf6967c12d06cad1930893d 793 Gene3D G3DSA:3.40.50.300 306 669 1.7E-124 T 11-10-2018 ATC04_15230 a85de5be3bf6967c12d06cad1930893d 793 Gene3D G3DSA:1.10.10.160 132 208 5.1E-97 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily ATC04_15230 a85de5be3bf6967c12d06cad1930893d 793 Gene3D G3DSA:3.40.50.300 27 300 5.1E-97 T 11-10-2018 ATC04_15230 a85de5be3bf6967c12d06cad1930893d 793 Gene3D G3DSA:1.10.486.10 409 577 1.7E-124 T 11-10-2018 ATC04_17445 8156e2177580c09d3f78eeac0fc32e1f 311 SUPERFAMILY SSF161098 62 297 8.5E-31 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_17445 8156e2177580c09d3f78eeac0fc32e1f 311 Gene3D G3DSA:1.10.3720.10 59 306 4.1E-34 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_17445 8156e2177580c09d3f78eeac0fc32e1f 311 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 303 2.1E-81 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 ATC04_17445 8156e2177580c09d3f78eeac0fc32e1f 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 301 1.3E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_06205 9c7d958d880f5a29f6a887d643a3a925 236 SUPERFAMILY SSF54768 65 132 6.7E-23 T 11-10-2018 ATC04_06205 9c7d958d880f5a29f6a887d643a3a925 236 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 65 218 5.2E-65 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ATC04_06205 9c7d958d880f5a29f6a887d643a3a925 236 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 31 219 33.988 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ATC04_06205 9c7d958d880f5a29f6a887d643a3a925 236 Gene3D G3DSA:3.30.160.20 58 128 4.6E-30 T 11-10-2018 ATC04_06205 9c7d958d880f5a29f6a887d643a3a925 236 ProSitePatterns PS00585 Ribosomal protein S5 signature. 84 116 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site ATC04_06205 9c7d958d880f5a29f6a887d643a3a925 236 SUPERFAMILY SSF54211 136 214 2.28E-22 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_06205 9c7d958d880f5a29f6a887d643a3a925 236 Gene3D G3DSA:3.30.230.10 132 222 2.0E-32 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATC04_06205 9c7d958d880f5a29f6a887d643a3a925 236 Pfam PF03719 Ribosomal protein S5, C-terminal domain 143 213 5.5E-27 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 ATC04_06205 9c7d958d880f5a29f6a887d643a3a925 236 Pfam PF00333 Ribosomal protein S5, N-terminal domain 68 131 1.7E-28 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 ATC04_09765 7b283cf2298538661251bf71d881f926 503 Pfam PF00890 FAD binding domain 22 468 6.1E-43 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_09765 7b283cf2298538661251bf71d881f926 503 Gene3D G3DSA:3.90.700.10 295 421 2.6E-166 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_09765 7b283cf2298538661251bf71d881f926 503 Gene3D G3DSA:3.50.50.60 20 482 2.6E-166 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_09765 7b283cf2298538661251bf71d881f926 503 SUPERFAMILY SSF51905 15 487 2.46E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_09765 7b283cf2298538661251bf71d881f926 503 SUPERFAMILY SSF56425 300 413 5.23E-18 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_06040 ad8d71936b05a47ee1e088da658953a6 173 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_06040 ad8d71936b05a47ee1e088da658953a6 173 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 23.821 T 11-10-2018 IPR022973 Ribosomal protein L10 ATC04_06040 ad8d71936b05a47ee1e088da658953a6 173 Pfam PF00466 Ribosomal protein L10 4 98 1.1E-25 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 ATC04_06040 ad8d71936b05a47ee1e088da658953a6 173 Gene3D G3DSA:3.30.70.1730 2 163 2.5E-36 T 11-10-2018 ATC04_06040 ad8d71936b05a47ee1e088da658953a6 173 SUPERFAMILY SSF160369 1 158 1.83E-45 T 11-10-2018 ATC04_11740 8e4f87684619a692f98614acfd5612dc 303 SUPERFAMILY SSF48452 170 286 7.21E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_11740 8e4f87684619a692f98614acfd5612dc 303 Pfam PF14561 Tetratricopeptide repeat 215 303 1.1E-22 T 11-10-2018 ATC04_11740 8e4f87684619a692f98614acfd5612dc 303 Gene3D G3DSA:1.25.40.10 216 303 1.1E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_11740 8e4f87684619a692f98614acfd5612dc 303 Gene3D G3DSA:3.40.30.10 36 142 3.1E-10 T 11-10-2018 ATC04_11740 8e4f87684619a692f98614acfd5612dc 303 SUPERFAMILY SSF52833 39 139 8.41E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_06130 11156ee698f0170d398e89b2cdeace01 121 Gene3D G3DSA:3.90.470.10 1 120 5.6E-45 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 ATC04_06130 11156ee698f0170d398e89b2cdeace01 121 ProSitePatterns PS00464 Ribosomal protein L22 signature. 88 112 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06130 11156ee698f0170d398e89b2cdeace01 121 Pfam PF00237 Ribosomal protein L22p/L17e 5 112 8.7E-33 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 ATC04_06130 11156ee698f0170d398e89b2cdeace01 121 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 112 3.4E-40 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06130 11156ee698f0170d398e89b2cdeace01 121 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 115 28.529 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06130 11156ee698f0170d398e89b2cdeace01 121 SUPERFAMILY SSF54843 1 114 1.1E-37 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 ATC04_14590 9cba64668c34aa4bd669534474ebfef0 465 Gene3D G3DSA:1.20.1250.20 15 448 3.5E-64 T 11-10-2018 ATC04_14590 9cba64668c34aa4bd669534474ebfef0 465 SUPERFAMILY SSF103473 15 430 2.75E-66 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_14590 9cba64668c34aa4bd669534474ebfef0 465 ProSitePatterns PS00216 Sugar transport proteins signature 1. 304 320 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_14590 9cba64668c34aa4bd669534474ebfef0 465 Pfam PF00083 Sugar (and other) transporter 18 228 9.9E-22 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_14590 9cba64668c34aa4bd669534474ebfef0 465 Pfam PF07690 Major Facilitator Superfamily 260 439 1.6E-14 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_10310 11ce3050f21a1ab16c9b2c80af0e5c59 124 Gene3D G3DSA:3.10.180.10 1 122 1.6E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_10310 11ce3050f21a1ab16c9b2c80af0e5c59 124 SUPERFAMILY SSF54593 1 123 3.16E-19 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_14655 f183d757b7a6868601af35dc4c173d7a 187 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_14655 f183d757b7a6868601af35dc4c173d7a 187 SUPERFAMILY SSF53041 5 137 1.07E-44 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ATC04_14655 f183d757b7a6868601af35dc4c173d7a 187 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_14655 f183d757b7a6868601af35dc4c173d7a 187 Pfam PF02796 Helix-turn-helix domain of resolvase 140 184 1.4E-11 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 ATC04_14655 f183d757b7a6868601af35dc4c173d7a 187 SMART SM00857 4 138 2.0E-58 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_14655 f183d757b7a6868601af35dc4c173d7a 187 SUPERFAMILY SSF46689 140 182 2.33E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_14655 f183d757b7a6868601af35dc4c173d7a 187 Gene3D G3DSA:1.10.10.60 144 185 8.1E-7 T 11-10-2018 ATC04_14655 f183d757b7a6868601af35dc4c173d7a 187 Gene3D G3DSA:3.40.50.1390 4 127 5.7E-48 T 11-10-2018 ATC04_14655 f183d757b7a6868601af35dc4c173d7a 187 Pfam PF00239 Resolvase, N terminal domain 5 137 7.4E-45 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_03500 3a5421b7efed177ea355db4e38c4f2c6 307 SUPERFAMILY SSF53850 106 306 3.94E-37 T 11-10-2018 ATC04_03500 3a5421b7efed177ea355db4e38c4f2c6 307 Gene3D G3DSA:3.40.190.10 107 288 1.7E-39 T 11-10-2018 ATC04_03500 3a5421b7efed177ea355db4e38c4f2c6 307 Gene3D G3DSA:3.40.190.10 178 280 1.7E-39 T 11-10-2018 ATC04_03500 3a5421b7efed177ea355db4e38c4f2c6 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 75 1.3E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_03500 3a5421b7efed177ea355db4e38c4f2c6 307 Gene3D G3DSA:1.10.10.10 10 105 2.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03500 3a5421b7efed177ea355db4e38c4f2c6 307 SUPERFAMILY SSF46785 15 124 1.02E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03500 3a5421b7efed177ea355db4e38c4f2c6 307 Pfam PF03466 LysR substrate binding domain 104 306 8.5E-41 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_07300 0625f56a392966530bd0a9faf8258fc6 137 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 134 1.9E-38 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ATC04_07300 0625f56a392966530bd0a9faf8258fc6 137 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 137 50.243 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ATC04_07300 0625f56a392966530bd0a9faf8258fc6 137 SUPERFAMILY SSF89447 1 136 7.48E-46 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily ATC04_07300 0625f56a392966530bd0a9faf8258fc6 137 Pfam PF02381 MraZ protein, putative antitoxin-like 72 136 1.8E-18 T 11-10-2018 IPR020603 MraZ domain ATC04_07300 0625f56a392966530bd0a9faf8258fc6 137 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 1.0E-18 T 11-10-2018 IPR020603 MraZ domain ATC04_07300 0625f56a392966530bd0a9faf8258fc6 137 Gene3D G3DSA:2.40.330.20 1 137 5.6E-46 T 11-10-2018 IPR038619 MraZ superfamily ATC04_07300 0625f56a392966530bd0a9faf8258fc6 137 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 128 2.0E-52 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ATC04_09075 3a9467927d3d079cac1f1dc500252878 300 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 15 300 1.4E-143 T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ATC04_09075 3a9467927d3d079cac1f1dc500252878 300 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 10 300 51.721 T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ATC04_09075 3a9467927d3d079cac1f1dc500252878 300 Pfam PF01680 SOR/SNZ family 14 218 7.0E-106 T 11-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ATC04_09075 3a9467927d3d079cac1f1dc500252878 300 PIRSF PIRSF029271 1 300 1.3E-148 T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ATC04_09075 3a9467927d3d079cac1f1dc500252878 300 ProSitePatterns PS01235 PdxS/SNZ family signature. 211 229 - T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ATC04_09075 3a9467927d3d079cac1f1dc500252878 300 Gene3D G3DSA:3.20.20.70 9 300 1.1E-148 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_09075 3a9467927d3d079cac1f1dc500252878 300 SUPERFAMILY SSF51366 24 274 6.12E-63 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ATC04_00490 32386231b99ba27ca1d80edc7541c1b7 327 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 14 24 - T 11-10-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 ATC04_00490 32386231b99ba27ca1d80edc7541c1b7 327 SUPERFAMILY SSF53590 9 317 6.15E-105 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like ATC04_00490 32386231b99ba27ca1d80edc7541c1b7 327 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 9 307 5.9E-94 T 11-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ATC04_00490 32386231b99ba27ca1d80edc7541c1b7 327 Gene3D G3DSA:3.90.245.10 8 320 7.3E-125 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like ATC04_12585 dfc55b58404a571b0016db4f60c743af 444 Gene3D G3DSA:1.20.1250.20 246 436 2.6E-14 T 11-10-2018 ATC04_12585 dfc55b58404a571b0016db4f60c743af 444 Gene3D G3DSA:1.20.1250.20 6 202 9.1E-12 T 11-10-2018 ATC04_12585 dfc55b58404a571b0016db4f60c743af 444 SUPERFAMILY SSF103473 10 434 1.48E-34 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_12585 dfc55b58404a571b0016db4f60c743af 444 Pfam PF07690 Major Facilitator Superfamily 260 426 1.5E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_00195 2dc595eb92b711e7c2feb4216e48e27b 318 Gene3D G3DSA:3.20.20.70 2 307 1.9E-66 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_00195 2dc595eb92b711e7c2feb4216e48e27b 318 Pfam PF03060 Nitronate monooxygenase 81 303 8.2E-31 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ATC04_00195 2dc595eb92b711e7c2feb4216e48e27b 318 SUPERFAMILY SSF51412 4 302 7.33E-43 T 11-10-2018 ATC04_02810 27e15711c1d56b349870b730b1df3d01 380 Gene3D G3DSA:3.40.630.30 164 357 2.8E-38 T 11-10-2018 ATC04_02810 27e15711c1d56b349870b730b1df3d01 380 Pfam PF02388 FemAB family 271 371 1.4E-17 T 11-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 ATC04_02810 27e15711c1d56b349870b730b1df3d01 380 Pfam PF02388 FemAB family 11 254 4.8E-27 T 11-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 ATC04_02810 27e15711c1d56b349870b730b1df3d01 380 SUPERFAMILY SSF55729 8 182 2.04E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_02810 27e15711c1d56b349870b730b1df3d01 380 SUPERFAMILY SSF55729 191 371 2.09E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_02810 27e15711c1d56b349870b730b1df3d01 380 Gene3D G3DSA:3.40.630.30 7 150 1.6E-18 T 11-10-2018 ATC04_02510 f7cfc2b6b5af3cbd9b86d400c734e9ad 717 Gene3D G3DSA:3.40.50.261 146 310 1.7E-47 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_02510 f7cfc2b6b5af3cbd9b86d400c734e9ad 717 SUPERFAMILY SSF51735 17 153 3.19E-24 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_02510 f7cfc2b6b5af3cbd9b86d400c734e9ad 717 Gene3D G3DSA:3.30.1490.20 520 597 1.1E-69 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ATC04_02510 f7cfc2b6b5af3cbd9b86d400c734e9ad 717 Gene3D G3DSA:3.40.50.261 312 482 5.8E-23 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_02510 f7cfc2b6b5af3cbd9b86d400c734e9ad 717 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 169 306 3.3E-45 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain ATC04_02510 f7cfc2b6b5af3cbd9b86d400c734e9ad 717 Pfam PF13549 ATP-grasp domain 497 713 2.8E-62 T 11-10-2018 ATC04_02510 f7cfc2b6b5af3cbd9b86d400c734e9ad 717 Pfam PF13380 CoA binding domain 26 150 1.9E-13 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ATC04_02510 f7cfc2b6b5af3cbd9b86d400c734e9ad 717 SUPERFAMILY SSF52210 147 309 8.24E-37 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_02510 f7cfc2b6b5af3cbd9b86d400c734e9ad 717 Gene3D G3DSA:3.40.50.720 17 145 5.1E-31 T 11-10-2018 ATC04_02510 f7cfc2b6b5af3cbd9b86d400c734e9ad 717 Gene3D G3DSA:3.30.470.20 503 712 1.1E-69 T 11-10-2018 ATC04_02510 f7cfc2b6b5af3cbd9b86d400c734e9ad 717 SMART SM00881 22 116 4.2E-18 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ATC04_02510 f7cfc2b6b5af3cbd9b86d400c734e9ad 717 SUPERFAMILY SSF56059 503 715 6.19E-39 T 11-10-2018 ATC04_02510 f7cfc2b6b5af3cbd9b86d400c734e9ad 717 SUPERFAMILY SSF52210 315 476 1.44E-19 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_06655 d3bc419b707de348f2cb857231bb39ff 180 SUPERFAMILY SSF55729 2 164 1.29E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_06655 d3bc419b707de348f2cb857231bb39ff 180 Gene3D G3DSA:3.40.630.30 3 169 3.8E-34 T 11-10-2018 ATC04_06655 d3bc419b707de348f2cb857231bb39ff 180 Pfam PF00583 Acetyltransferase (GNAT) family 48 132 3.7E-11 T 11-10-2018 IPR000182 GNAT domain ATC04_10385 c4121c9a3160710c10aa36303a0363e3 80 Pfam PF13083 KH domain 4 65 2.5E-18 T 11-10-2018 ATC04_10385 c4121c9a3160710c10aa36303a0363e3 80 SUPERFAMILY SSF54814 17 60 7.19E-7 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ATC04_10385 c4121c9a3160710c10aa36303a0363e3 80 Gene3D G3DSA:3.30.300.20 6 73 4.7E-5 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ATC04_10385 c4121c9a3160710c10aa36303a0363e3 80 Hamap MF_00088 UPF0109 protein . 2 73 19.815 T 11-10-2018 IPR020627 Uncharacterised protein family UPF0109 ATC04_10155 6b1b09b5c7daf16888effd6c64bb8cd7 311 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 306 2.1E-129 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ATC04_10155 6b1b09b5c7daf16888effd6c64bb8cd7 311 Gene3D G3DSA:3.40.50.1100 46 147 7.9E-121 T 11-10-2018 ATC04_10155 6b1b09b5c7daf16888effd6c64bb8cd7 311 SUPERFAMILY SSF53686 3 308 1.96E-99 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATC04_10155 6b1b09b5c7daf16888effd6c64bb8cd7 311 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ATC04_10155 6b1b09b5c7daf16888effd6c64bb8cd7 311 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 306 6.1E-134 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ATC04_10155 6b1b09b5c7daf16888effd6c64bb8cd7 311 Gene3D G3DSA:3.40.50.1100 10 301 7.9E-121 T 11-10-2018 ATC04_10155 6b1b09b5c7daf16888effd6c64bb8cd7 311 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 295 1.2E-63 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ATC04_03535 4fb0e310d0f7c78098a44d5a4c80e675 616 SUPERFAMILY SSF51658 1 265 2.35E-68 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ATC04_03535 4fb0e310d0f7c78098a44d5a4c80e675 616 Gene3D G3DSA:3.10.180.10 428 615 1.0E-35 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_03535 4fb0e310d0f7c78098a44d5a4c80e675 616 Pfam PF01261 Xylose isomerase-like TIM barrel 20 217 7.7E-38 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ATC04_03535 4fb0e310d0f7c78098a44d5a4c80e675 616 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 293 392 2.4E-8 T 11-10-2018 ATC04_03535 4fb0e310d0f7c78098a44d5a4c80e675 616 Gene3D G3DSA:3.20.20.150 1 270 2.8E-68 T 11-10-2018 ATC04_03535 4fb0e310d0f7c78098a44d5a4c80e675 616 SUPERFAMILY SSF54593 292 606 1.56E-43 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_03535 4fb0e310d0f7c78098a44d5a4c80e675 616 Gene3D G3DSA:3.10.180.10 289 425 1.9E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_03535 4fb0e310d0f7c78098a44d5a4c80e675 616 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 439 568 8.9E-7 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_10655 66e9984681879d9592664ae280e11f1b 150 Pfam PF12028 Protein of unknown function (DUF3515) 4 134 1.0E-18 T 11-10-2018 IPR021903 Protein of unknown function DUF3515 ATC04_17335 3cf512ae8672eba8450c62dd947bddf5 137 PIRSF PIRSF009151 4 136 5.9E-53 T 11-10-2018 IPR008497 Protein of unknown function DUF779 ATC04_17335 3cf512ae8672eba8450c62dd947bddf5 137 Pfam PF05610 Protein of unknown function (DUF779) 28 131 2.2E-46 T 11-10-2018 IPR008497 Protein of unknown function DUF779 ATC04_02670 198de8d35f633423af585e31ec551df9 310 Gene3D G3DSA:1.10.3720.10 85 300 5.0E-23 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_02670 198de8d35f633423af585e31ec551df9 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 304 1.4E-34 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_02670 198de8d35f633423af585e31ec551df9 310 SUPERFAMILY SSF161098 90 294 8.37E-21 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_15525 fd4015ca068fcc38268caecdcd099365 500 SUPERFAMILY SSF53474 92 485 3.49E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_15525 fd4015ca068fcc38268caecdcd099365 500 Pfam PF00561 alpha/beta hydrolase fold 93 473 3.9E-35 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_10825 91ae1c0ee4250954454df4a14607d582 391 Gene3D G3DSA:3.40.50.2000 189 365 1.0E-37 T 11-10-2018 ATC04_10825 91ae1c0ee4250954454df4a14607d582 391 SUPERFAMILY SSF53756 9 377 2.03E-61 T 11-10-2018 ATC04_10825 91ae1c0ee4250954454df4a14607d582 391 Pfam PF00534 Glycosyl transferases group 1 197 351 3.6E-26 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ATC04_10825 91ae1c0ee4250954454df4a14607d582 391 Pfam PF13439 Glycosyltransferase Family 4 20 183 6.0E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ATC04_10825 91ae1c0ee4250954454df4a14607d582 391 Gene3D G3DSA:3.40.50.2000 8 188 1.0E-8 T 11-10-2018 ATC04_01860 f07cb3636c4c147f514a0db4f56a99ca 166 Gene3D G3DSA:3.10.129.10 2 154 3.5E-49 T 11-10-2018 ATC04_01860 f07cb3636c4c147f514a0db4f56a99ca 166 SUPERFAMILY SSF54637 6 154 7.94E-45 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_01860 f07cb3636c4c147f514a0db4f56a99ca 166 Pfam PF01575 MaoC like domain 17 133 4.1E-23 T 11-10-2018 IPR002539 MaoC-like dehydratase domain ATC04_02520 6678bb7cf2a08a1e8181b895b963a9d2 270 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 105 4.3E-9 T 11-10-2018 ATC04_02520 6678bb7cf2a08a1e8181b895b963a9d2 270 Gene3D G3DSA:3.10.180.10 1 134 2.5E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_02520 6678bb7cf2a08a1e8181b895b963a9d2 270 SUPERFAMILY SSF54593 4 134 5.64E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_03530 2426f1aa7dbc9132214a5f4503f7cdfa 290 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 99 6.3E-18 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ATC04_03530 2426f1aa7dbc9132214a5f4503f7cdfa 290 Gene3D G3DSA:3.40.50.720 110 252 3.3E-77 T 11-10-2018 ATC04_03530 2426f1aa7dbc9132214a5f4503f7cdfa 290 Gene3D G3DSA:3.40.50.10860 12 274 3.3E-77 T 11-10-2018 ATC04_03530 2426f1aa7dbc9132214a5f4503f7cdfa 290 SUPERFAMILY SSF51735 112 286 4.42E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_03530 2426f1aa7dbc9132214a5f4503f7cdfa 290 SUPERFAMILY SSF53223 5 111 1.32E-23 T 11-10-2018 ATC04_13660 89cc24e18201a8d6b3b4ab304eac83ce 379 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 171 367 8.7E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_13660 89cc24e18201a8d6b3b4ab304eac83ce 379 SUPERFAMILY SSF161098 139 364 2.75E-49 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_13660 89cc24e18201a8d6b3b4ab304eac83ce 379 Gene3D G3DSA:1.10.3720.10 135 377 8.1E-59 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_05200 e2021d5e09a309169290e81f3aafb00f 529 SUPERFAMILY SSF53335 166 308 2.47E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_05200 e2021d5e09a309169290e81f3aafb00f 529 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 248 254 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ATC04_05200 e2021d5e09a309169290e81f3aafb00f 529 Gene3D G3DSA:3.40.50.150 159 316 2.7E-25 T 11-10-2018 ATC04_05200 e2021d5e09a309169290e81f3aafb00f 529 Pfam PF05175 Methyltransferase small domain 155 255 1.6E-8 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ATC04_16980 3bee509b962504538767a8159d167fae 428 Gene3D G3DSA:3.40.50.2300 56 187 9.4E-12 T 11-10-2018 ATC04_16980 3bee509b962504538767a8159d167fae 428 Pfam PF13458 Periplasmic binding protein 59 388 1.2E-11 T 11-10-2018 IPR028081 Leucine-binding protein domain ATC04_16980 3bee509b962504538767a8159d167fae 428 SUPERFAMILY SSF53822 59 385 7.23E-18 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ATC04_13850 a0d495502aa157be15f32405e239bd90 536 Gene3D G3DSA:3.90.226.10 6 270 6.7E-92 T 11-10-2018 ATC04_13850 a0d495502aa157be15f32405e239bd90 536 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 109 123 2.7E-6 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ATC04_13850 a0d495502aa157be15f32405e239bd90 536 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 179 196 2.7E-6 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ATC04_13850 a0d495502aa157be15f32405e239bd90 536 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 143 161 2.7E-6 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ATC04_13850 a0d495502aa157be15f32405e239bd90 536 Pfam PF01039 Carboxyl transferase domain 42 534 9.7E-191 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 ATC04_13850 a0d495502aa157be15f32405e239bd90 536 Gene3D G3DSA:3.90.226.10 274 536 1.9E-90 T 11-10-2018 ATC04_13850 a0d495502aa157be15f32405e239bd90 536 SUPERFAMILY SSF52096 20 267 3.37E-75 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_13850 a0d495502aa157be15f32405e239bd90 536 SUPERFAMILY SSF52096 281 536 7.91E-87 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_09460 53be563f040e1dbfa4a5a56a69d233fa 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 7.3E-12 T 11-10-2018 ATC04_09460 53be563f040e1dbfa4a5a56a69d233fa 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 7.3E-12 T 11-10-2018 ATC04_09460 53be563f040e1dbfa4a5a56a69d233fa 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 7.3E-12 T 11-10-2018 ATC04_09460 53be563f040e1dbfa4a5a56a69d233fa 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 7.3E-12 T 11-10-2018 ATC04_09460 53be563f040e1dbfa4a5a56a69d233fa 392 SUPERFAMILY SSF51905 1 375 3.29E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_09460 53be563f040e1dbfa4a5a56a69d233fa 392 Gene3D G3DSA:3.50.50.60 5 345 1.9E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_09460 53be563f040e1dbfa4a5a56a69d233fa 392 Gene3D G3DSA:3.30.9.50 38 272 1.9E-52 T 11-10-2018 ATC04_09460 53be563f040e1dbfa4a5a56a69d233fa 392 Pfam PF01494 FAD binding domain 3 171 1.2E-9 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 ATC04_13600 34e979d01a3b607a136b13138d3a7b09 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 291 8.6E-68 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 ATC04_13600 34e979d01a3b607a136b13138d3a7b09 310 Gene3D G3DSA:3.40.1190.20 1 304 5.7E-76 T 11-10-2018 IPR029056 Ribokinase-like ATC04_13600 34e979d01a3b607a136b13138d3a7b09 310 SUPERFAMILY SSF53613 1 293 1.2E-47 T 11-10-2018 IPR029056 Ribokinase-like ATC04_13600 34e979d01a3b607a136b13138d3a7b09 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ATC04_13600 34e979d01a3b607a136b13138d3a7b09 310 PIRSF PIRSF000535 1 302 1.0E-58 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 ATC04_13600 34e979d01a3b607a136b13138d3a7b09 310 Pfam PF00294 pfkB family carbohydrate kinase 24 289 2.0E-34 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ATC04_15745 29a4dc4a3f170e5de635b0e632c38f2f 391 Pfam PF00042 Globin 10 105 2.6E-4 T 11-10-2018 IPR000971 Globin GO:0020037 ATC04_15745 29a4dc4a3f170e5de635b0e632c38f2f 391 SUPERFAMILY SSF63380 152 255 4.84E-19 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ATC04_15745 29a4dc4a3f170e5de635b0e632c38f2f 391 SUPERFAMILY SSF46458 1 147 6.65E-31 T 11-10-2018 IPR009050 Globin-like superfamily ATC04_15745 29a4dc4a3f170e5de635b0e632c38f2f 391 Pfam PF00970 Oxidoreductase FAD-binding domain 157 253 2.1E-9 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ATC04_15745 29a4dc4a3f170e5de635b0e632c38f2f 391 SUPERFAMILY SSF52343 243 381 7.86E-24 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_15745 29a4dc4a3f170e5de635b0e632c38f2f 391 Gene3D G3DSA:1.10.490.10 1 148 1.5E-46 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 ATC04_15745 29a4dc4a3f170e5de635b0e632c38f2f 391 Pfam PF00175 Oxidoreductase NAD-binding domain 267 365 8.9E-5 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ATC04_15745 29a4dc4a3f170e5de635b0e632c38f2f 391 Gene3D G3DSA:3.40.50.80 254 388 1.9E-20 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_15745 29a4dc4a3f170e5de635b0e632c38f2f 391 Gene3D G3DSA:2.40.30.10 153 253 2.3E-19 T 11-10-2018 ATC04_03070 3ef3bb5896da149a6d871422e6a81bf1 255 SUPERFAMILY SSF46894 185 245 2.65E-8 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_03070 3ef3bb5896da149a6d871422e6a81bf1 255 Pfam PF00196 Bacterial regulatory proteins, luxR family 193 239 4.8E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_03070 3ef3bb5896da149a6d871422e6a81bf1 255 Gene3D G3DSA:1.10.10.10 84 254 4.8E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03070 3ef3bb5896da149a6d871422e6a81bf1 255 SMART SM00421 186 243 1.8E-4 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_03065 294b30c97dcba8465eb5d7ebe2e6a713 484 Gene3D G3DSA:3.40.350.10 50 212 8.1E-9 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ATC04_03065 294b30c97dcba8465eb5d7ebe2e6a713 484 Gene3D G3DSA:3.90.230.10 213 482 5.8E-65 T 11-10-2018 ATC04_03065 294b30c97dcba8465eb5d7ebe2e6a713 484 SUPERFAMILY SSF55920 209 475 4.58E-55 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like ATC04_03065 294b30c97dcba8465eb5d7ebe2e6a713 484 SUPERFAMILY SSF53092 54 208 2.25E-15 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ATC04_03065 294b30c97dcba8465eb5d7ebe2e6a713 484 SMART SM01011 47 179 3.0E-11 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 ATC04_03065 294b30c97dcba8465eb5d7ebe2e6a713 484 Pfam PF05195 Aminopeptidase P, N-terminal domain 54 171 2.8E-12 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 ATC04_03065 294b30c97dcba8465eb5d7ebe2e6a713 484 Pfam PF00557 Metallopeptidase family M24 229 453 2.0E-40 T 11-10-2018 IPR000994 Peptidase M24 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 SUPERFAMILY SSF52210 325 484 1.13E-26 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 Gene3D G3DSA:3.40.630.30 17 197 2.0E-47 T 11-10-2018 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 Gene3D G3DSA:3.30.1490.20 681 754 1.1E-54 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 Gene3D G3DSA:3.30.470.20 663 866 1.1E-54 T 11-10-2018 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 SUPERFAMILY SSF51735 198 330 4.55E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 Pfam PF13549 ATP-grasp domain 661 869 5.9E-49 T 11-10-2018 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 Pfam PF13380 CoA binding domain 205 328 2.0E-20 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 SUPERFAMILY SSF56059 664 861 1.46E-21 T 11-10-2018 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 Gene3D G3DSA:3.40.50.261 325 486 7.5E-38 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 347 482 3.0E-34 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 Pfam PF13420 Acetyltransferase (GNAT) domain 28 167 3.8E-11 T 11-10-2018 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 Gene3D G3DSA:3.40.50.261 525 629 4.5E-6 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 Gene3D G3DSA:3.40.50.720 198 323 1.1E-37 T 11-10-2018 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 SMART SM00881 201 296 2.2E-29 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 SUPERFAMILY SSF52210 489 626 7.59E-11 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATC04_07555 efb2db54dad0d06119c73da3adfd8ca2 886 SUPERFAMILY SSF55729 25 167 7.72E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_15820 cec40e8aea4d83250e8c98fa04d6c1d8 776 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 9 173 6.9E-48 T 11-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal ATC04_15820 cec40e8aea4d83250e8c98fa04d6c1d8 776 SUPERFAMILY SSF101967 403 540 1.26E-5 T 11-10-2018 ATC04_15820 cec40e8aea4d83250e8c98fa04d6c1d8 776 Pfam PF12698 ABC-2 family transporter protein 24 160 3.6E-10 T 11-10-2018 ATC04_15820 cec40e8aea4d83250e8c98fa04d6c1d8 776 Pfam PF12698 ABC-2 family transporter protein 569 736 9.1E-11 T 11-10-2018 ATC04_15820 cec40e8aea4d83250e8c98fa04d6c1d8 776 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 557 763 7.4E-59 T 11-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal ATC04_15820 cec40e8aea4d83250e8c98fa04d6c1d8 776 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 512 537 6.4E-7 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ATC04_15820 cec40e8aea4d83250e8c98fa04d6c1d8 776 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 482 509 8.2E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ATC04_15820 cec40e8aea4d83250e8c98fa04d6c1d8 776 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 201 225 1.4E-4 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ATC04_15820 cec40e8aea4d83250e8c98fa04d6c1d8 776 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 248 274 2.5E-6 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ATC04_15820 cec40e8aea4d83250e8c98fa04d6c1d8 776 SUPERFAMILY SSF101967 188 318 1.23E-6 T 11-10-2018 ATC04_09120 f1a076e61eb9eede8c6a5aa43f9a611e 207 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 196 3.6E-37 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ATC04_09120 f1a076e61eb9eede8c6a5aa43f9a611e 207 SMART SM00278 72 91 16.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ATC04_09120 f1a076e61eb9eede8c6a5aa43f9a611e 207 SMART SM00278 107 126 17.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ATC04_09120 f1a076e61eb9eede8c6a5aa43f9a611e 207 SUPERFAMILY SSF50249 1 62 2.57E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_09120 f1a076e61eb9eede8c6a5aa43f9a611e 207 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 26.054 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ATC04_09120 f1a076e61eb9eede8c6a5aa43f9a611e 207 SUPERFAMILY SSF47781 64 132 1.63E-17 T 11-10-2018 IPR010994 RuvA domain 2-like ATC04_09120 f1a076e61eb9eede8c6a5aa43f9a611e 207 Gene3D G3DSA:1.10.8.10 143 204 4.0E-13 T 11-10-2018 ATC04_09120 f1a076e61eb9eede8c6a5aa43f9a611e 207 Pfam PF14520 Helix-hairpin-helix domain 71 127 1.4E-13 T 11-10-2018 ATC04_09120 f1a076e61eb9eede8c6a5aa43f9a611e 207 Pfam PF01330 RuvA N terminal domain 1 61 7.7E-17 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 ATC04_09120 f1a076e61eb9eede8c6a5aa43f9a611e 207 SUPERFAMILY SSF46929 152 201 5.49E-9 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily ATC04_09120 f1a076e61eb9eede8c6a5aa43f9a611e 207 Gene3D G3DSA:1.10.150.20 66 142 2.2E-22 T 11-10-2018 ATC04_09120 f1a076e61eb9eede8c6a5aa43f9a611e 207 Gene3D G3DSA:2.40.50.140 1 65 1.7E-22 T 11-10-2018 ATC04_09120 f1a076e61eb9eede8c6a5aa43f9a611e 207 Pfam PF07499 RuvA, C-terminal domain 152 201 1.3E-9 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 ATC04_18350 c192c042fd2170a64b053c7e2036e974 259 SUPERFAMILY SSF46785 180 236 5.46E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_18350 c192c042fd2170a64b053c7e2036e974 259 Gene3D G3DSA:1.10.10.10 176 240 3.6E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_18350 c192c042fd2170a64b053c7e2036e974 259 Pfam PF01613 Flavin reductase like domain 22 163 5.1E-32 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ATC04_18350 c192c042fd2170a64b053c7e2036e974 259 SMART SM00903 21 163 5.3E-51 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ATC04_18350 c192c042fd2170a64b053c7e2036e974 259 SUPERFAMILY SSF50475 12 163 1.62E-45 T 11-10-2018 ATC04_18350 c192c042fd2170a64b053c7e2036e974 259 Gene3D G3DSA:2.30.110.10 3 173 2.2E-46 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ATC04_11445 a316f5778a2917e7b3932a18867e282d 249 Pfam PF12697 Alpha/beta hydrolase family 21 209 1.8E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_11445 a316f5778a2917e7b3932a18867e282d 249 Gene3D G3DSA:3.40.50.1820 6 247 1.5E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_11445 a316f5778a2917e7b3932a18867e282d 249 SUPERFAMILY SSF53474 9 248 1.56E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_06190 b582d7cbdd7c8b297d5a6fd7c7ad44e6 132 Pfam PF00410 Ribosomal protein S8 5 132 5.4E-50 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06190 b582d7cbdd7c8b297d5a6fd7c7ad44e6 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06190 b582d7cbdd7c8b297d5a6fd7c7ad44e6 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 31.164 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06190 b582d7cbdd7c8b297d5a6fd7c7ad44e6 132 Gene3D G3DSA:3.30.1490.10 78 132 3.6E-25 T 11-10-2018 ATC04_06190 b582d7cbdd7c8b297d5a6fd7c7ad44e6 132 Gene3D G3DSA:3.30.1370.30 4 77 2.4E-27 T 11-10-2018 ATC04_06190 b582d7cbdd7c8b297d5a6fd7c7ad44e6 132 SUPERFAMILY SSF56047 2 132 7.06E-45 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_04020 ea9cbd56459bbe545139c978aec7959b 529 Gene3D G3DSA:2.120.10.10 5 349 5.4E-105 T 11-10-2018 ATC04_04020 ea9cbd56459bbe545139c978aec7959b 529 Pfam PF13088 BNR repeat-like domain 53 323 1.0E-26 T 11-10-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 ATC04_04020 ea9cbd56459bbe545139c978aec7959b 529 SUPERFAMILY SSF50939 9 342 3.36E-87 T 11-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 ATC04_09965 9d5ba23c167eb3ac4acc20705d52a404 151 Pfam PF12802 MarR family 40 97 2.0E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_09965 9d5ba23c167eb3ac4acc20705d52a404 151 SUPERFAMILY SSF46785 12 145 7.04E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_09965 9d5ba23c167eb3ac4acc20705d52a404 151 Gene3D G3DSA:1.10.10.10 18 150 2.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_02230 a277725036fa7185646b1b9626c1fa37 287 Gene3D G3DSA:3.30.420.10 113 268 1.3E-15 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_02230 a277725036fa7185646b1b9626c1fa37 287 SUPERFAMILY SSF53098 112 271 1.77E-40 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_02230 a277725036fa7185646b1b9626c1fa37 287 Pfam PF00665 Integrase core domain 117 231 3.3E-31 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_10800 a277725036fa7185646b1b9626c1fa37 287 Gene3D G3DSA:3.30.420.10 113 268 1.3E-15 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_10800 a277725036fa7185646b1b9626c1fa37 287 SUPERFAMILY SSF53098 112 271 1.77E-40 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_10800 a277725036fa7185646b1b9626c1fa37 287 Pfam PF00665 Integrase core domain 117 231 3.3E-31 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_03485 d99c73e066b56980b614aa8f06a6f74d 215 Gene3D G3DSA:3.90.79.10 1 98 1.9E-18 T 11-10-2018 ATC04_03485 d99c73e066b56980b614aa8f06a6f74d 215 Gene3D G3DSA:3.90.79.10 99 195 4.5E-23 T 11-10-2018 ATC04_03485 d99c73e066b56980b614aa8f06a6f74d 215 SUPERFAMILY SSF55811 8 168 2.17E-16 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_03485 d99c73e066b56980b614aa8f06a6f74d 215 Pfam PF00293 NUDIX domain 78 156 2.5E-8 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_04785 733aa0122abda8bd64c9587dba42e833 635 Gene3D G3DSA:2.120.10.30 324 452 1.0E-25 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ATC04_04785 733aa0122abda8bd64c9587dba42e833 635 Pfam PF01436 NHL repeat 424 451 2.6E-5 T 11-10-2018 IPR001258 NHL repeat GO:0005515 ATC04_04785 733aa0122abda8bd64c9587dba42e833 635 SUPERFAMILY SSF52833 25 170 3.91E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_04785 733aa0122abda8bd64c9587dba42e833 635 Gene3D G3DSA:3.40.30.10 12 165 7.4E-34 T 11-10-2018 ATC04_04785 733aa0122abda8bd64c9587dba42e833 635 SUPERFAMILY SSF101898 176 498 2.62E-28 T 11-10-2018 ATC04_04785 733aa0122abda8bd64c9587dba42e833 635 Pfam PF00578 AhpC/TSA family 26 135 1.6E-8 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ATC04_04785 733aa0122abda8bd64c9587dba42e833 635 Gene3D G3DSA:2.120.10.30 207 306 2.0E-10 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ATC04_09455 3c0b695f05b98e1ffdd4affe2424ce72 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 24 185 7.2E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ATC04_09455 3c0b695f05b98e1ffdd4affe2424ce72 320 Hamap MF_00367 GTPase Era [era]. 17 320 34.159 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_09455 3c0b695f05b98e1ffdd4affe2424ce72 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 20 303 1.7E-65 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_09455 3c0b695f05b98e1ffdd4affe2424ce72 320 Pfam PF07650 KH domain 227 309 1.7E-17 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_09455 3c0b695f05b98e1ffdd4affe2424ce72 320 Gene3D G3DSA:3.40.50.300 18 202 4.7E-41 T 11-10-2018 ATC04_09455 3c0b695f05b98e1ffdd4affe2424ce72 320 SUPERFAMILY SSF52540 24 231 1.56E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09455 3c0b695f05b98e1ffdd4affe2424ce72 320 SUPERFAMILY SSF54814 201 320 1.31E-34 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ATC04_09455 3c0b695f05b98e1ffdd4affe2424ce72 320 Gene3D G3DSA:3.30.300.20 204 320 1.4E-39 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ATC04_09455 3c0b695f05b98e1ffdd4affe2424ce72 320 Pfam PF01926 50S ribosome-binding GTPase 23 137 5.1E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_05900 f7a49112bb3adf4de68c717fdfd7c17a 148 Pfam PF13452 N-terminal half of MaoC dehydratase 8 137 1.4E-32 T 11-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 ATC04_05900 f7a49112bb3adf4de68c717fdfd7c17a 148 PIRSF PIRSF018072 1 148 7.1E-57 T 11-10-2018 IPR016709 Uncharacterised protein family UPF0336 ATC04_05900 f7a49112bb3adf4de68c717fdfd7c17a 148 SUPERFAMILY SSF54637 7 147 1.33E-38 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_05900 f7a49112bb3adf4de68c717fdfd7c17a 148 Hamap MF_00799 UPF0336 protein . 1 148 32.162 T 11-10-2018 IPR016709 Uncharacterised protein family UPF0336 ATC04_05900 f7a49112bb3adf4de68c717fdfd7c17a 148 Gene3D G3DSA:3.10.129.10 2 148 1.2E-43 T 11-10-2018 ATC04_12365 70f61f646da14729cebd6b5ce7af7a23 165 Pfam PF00293 NUDIX domain 9 136 1.5E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_12365 70f61f646da14729cebd6b5ce7af7a23 165 PRINTS PR01403 7,8-dihydro-8-oxoguanine triphosphatase signature 29 45 1.4E-8 T 11-10-2018 IPR003563 7,8-dihydro-8-oxoguanine triphosphatase GO:0006281|GO:0008413 MetaCyc: PWY-6502|Reactome: R-HSA-2393930 ATC04_12365 70f61f646da14729cebd6b5ce7af7a23 165 PRINTS PR01403 7,8-dihydro-8-oxoguanine triphosphatase signature 132 150 1.4E-8 T 11-10-2018 IPR003563 7,8-dihydro-8-oxoguanine triphosphatase GO:0006281|GO:0008413 MetaCyc: PWY-6502|Reactome: R-HSA-2393930 ATC04_12365 70f61f646da14729cebd6b5ce7af7a23 165 PRINTS PR01403 7,8-dihydro-8-oxoguanine triphosphatase signature 93 112 1.4E-8 T 11-10-2018 IPR003563 7,8-dihydro-8-oxoguanine triphosphatase GO:0006281|GO:0008413 MetaCyc: PWY-6502|Reactome: R-HSA-2393930 ATC04_12365 70f61f646da14729cebd6b5ce7af7a23 165 PRINTS PR01403 7,8-dihydro-8-oxoguanine triphosphatase signature 113 131 1.4E-8 T 11-10-2018 IPR003563 7,8-dihydro-8-oxoguanine triphosphatase GO:0006281|GO:0008413 MetaCyc: PWY-6502|Reactome: R-HSA-2393930 ATC04_12365 70f61f646da14729cebd6b5ce7af7a23 165 PRINTS PR00502 NUDIX hydrolase family signature 54 69 9.0E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATC04_12365 70f61f646da14729cebd6b5ce7af7a23 165 PRINTS PR00502 NUDIX hydrolase family signature 40 54 9.0E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATC04_12365 70f61f646da14729cebd6b5ce7af7a23 165 ProSitePatterns PS00893 Nudix box signature. 45 66 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATC04_12365 70f61f646da14729cebd6b5ce7af7a23 165 SUPERFAMILY SSF55811 6 141 2.17E-25 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_12365 70f61f646da14729cebd6b5ce7af7a23 165 Gene3D G3DSA:3.90.79.10 11 162 5.3E-36 T 11-10-2018 ATC04_17940 f3e9adbe54150bbbedce91506671cf3a 230 SMART SM00554 132 227 2.6E-28 T 11-10-2018 IPR000782 FAS1 domain ATC04_17940 f3e9adbe54150bbbedce91506671cf3a 230 Gene3D G3DSA:2.30.180.10 66 228 9.3E-52 T 11-10-2018 IPR036378 FAS1 domain superfamily ATC04_17940 f3e9adbe54150bbbedce91506671cf3a 230 Pfam PF02469 Fasciclin domain 111 226 4.2E-26 T 11-10-2018 IPR000782 FAS1 domain ATC04_17940 f3e9adbe54150bbbedce91506671cf3a 230 SUPERFAMILY SSF82153 71 227 1.15E-34 T 11-10-2018 IPR036378 FAS1 domain superfamily ATC04_09290 67a7ab0eb235e996d5ff8c39a6e48bbe 111 Gene3D G3DSA:1.10.8.50 1 106 1.1E-36 T 11-10-2018 ATC04_09290 67a7ab0eb235e996d5ff8c39a6e48bbe 111 SUPERFAMILY SSF46946 54 104 2.52E-7 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ATC04_09290 67a7ab0eb235e996d5ff8c39a6e48bbe 111 PIRSF PIRSF002134 41 110 4.5E-5 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_13225 d0af316b08cb3371655207ac4ec1bc62 153 Gene3D G3DSA:3.40.630.30 1 152 6.2E-21 T 11-10-2018 ATC04_13225 d0af316b08cb3371655207ac4ec1bc62 153 Pfam PF13302 Acetyltransferase (GNAT) domain 2 129 1.2E-16 T 11-10-2018 IPR000182 GNAT domain ATC04_13225 d0af316b08cb3371655207ac4ec1bc62 153 SUPERFAMILY SSF55729 1 133 2.8E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_08255 b742cf4ac471169015cf945817cd9a8a 367 SUPERFAMILY SSF51569 8 358 8.79E-73 T 11-10-2018 ATC04_08255 b742cf4ac471169015cf945817cd9a8a 367 Hamap MF_00493 Transaldolase [tal]. 1 367 144.428 T 11-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ATC04_08255 b742cf4ac471169015cf945817cd9a8a 367 TIGRFAM TIGR00876 tal_mycobact: transaldolase 12 357 1.8E-127 T 11-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ATC04_08255 b742cf4ac471169015cf945817cd9a8a 367 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 16 358 4.8E-78 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ATC04_08255 b742cf4ac471169015cf945817cd9a8a 367 ProSitePatterns PS01054 Transaldolase signature 1. 42 50 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ATC04_08255 b742cf4ac471169015cf945817cd9a8a 367 Gene3D G3DSA:3.20.20.70 4 363 1.7E-147 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_08255 b742cf4ac471169015cf945817cd9a8a 367 PIRSF PIRSF036915 1 367 2.8E-161 T 11-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ATC04_08845 9a25cf7a8725bdae345886cc68cf084b 246 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 15 242 4.3E-58 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ATC04_08845 9a25cf7a8725bdae345886cc68cf084b 246 PIRSF PIRSF004848 6 246 4.1E-66 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ATC04_08845 9a25cf7a8725bdae345886cc68cf084b 246 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 18 241 27.26 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ATC04_08845 9a25cf7a8725bdae345886cc68cf084b 246 Pfam PF01168 Alanine racemase, N-terminal domain 19 242 3.6E-27 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATC04_08845 9a25cf7a8725bdae345886cc68cf084b 246 SUPERFAMILY SSF51419 11 240 2.62E-68 T 11-10-2018 IPR029066 PLP-binding barrel ATC04_08845 9a25cf7a8725bdae345886cc68cf084b 246 Gene3D G3DSA:3.20.20.10 3 245 4.4E-82 T 11-10-2018 IPR029066 PLP-binding barrel ATC04_08830 158766521b3544c135063539bb12bddc 124 SUPERFAMILY SSF51182 18 107 1.57E-15 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ATC04_08830 158766521b3544c135063539bb12bddc 124 Pfam PF07883 Cupin domain 39 97 6.6E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ATC04_08830 158766521b3544c135063539bb12bddc 124 Gene3D G3DSA:2.60.120.10 6 118 7.8E-13 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_14275 bc58b59550c0ed3e23ffcf3bd2012d8e 567 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 26 450 1.7E-77 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ATC04_14275 bc58b59550c0ed3e23ffcf3bd2012d8e 567 Gene3D G3DSA:1.20.1720.10 27 236 1.3E-51 T 11-10-2018 ATC04_14275 bc58b59550c0ed3e23ffcf3bd2012d8e 567 Gene3D G3DSA:1.20.1250.20 279 514 1.7E-18 T 11-10-2018 ATC04_14275 bc58b59550c0ed3e23ffcf3bd2012d8e 567 PRINTS PR01036 Tetracycline resistance protein TetB signature 149 173 5.9E-11 T 11-10-2018 ATC04_14275 bc58b59550c0ed3e23ffcf3bd2012d8e 567 PRINTS PR01036 Tetracycline resistance protein TetB signature 414 433 5.9E-11 T 11-10-2018 ATC04_14275 bc58b59550c0ed3e23ffcf3bd2012d8e 567 PRINTS PR01036 Tetracycline resistance protein TetB signature 214 232 5.9E-11 T 11-10-2018 ATC04_14275 bc58b59550c0ed3e23ffcf3bd2012d8e 567 PRINTS PR01036 Tetracycline resistance protein TetB signature 29 53 5.9E-11 T 11-10-2018 ATC04_14275 bc58b59550c0ed3e23ffcf3bd2012d8e 567 PRINTS PR01036 Tetracycline resistance protein TetB signature 119 139 5.9E-11 T 11-10-2018 ATC04_14275 bc58b59550c0ed3e23ffcf3bd2012d8e 567 PRINTS PR01036 Tetracycline resistance protein TetB signature 372 392 5.9E-11 T 11-10-2018 ATC04_14275 bc58b59550c0ed3e23ffcf3bd2012d8e 567 SUPERFAMILY SSF103473 1 506 1.96E-72 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_14275 bc58b59550c0ed3e23ffcf3bd2012d8e 567 Pfam PF07690 Major Facilitator Superfamily 31 423 1.4E-53 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 SUPERFAMILY SSF55447 381 482 7.46E-29 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 Gene3D G3DSA:3.30.465.10 212 375 1.7E-51 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 382 482 4.1E-24 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 46 54 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 Gene3D G3DSA:3.30.390.50 383 483 2.1E-26 T 11-10-2018 ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 SMART SM01092 381 483 4.7E-26 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 Gene3D G3DSA:1.10.150.120 90 204 2.4E-26 T 11-10-2018 ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 Gene3D G3DSA:3.10.20.30 9 89 6.5E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 62 2.3E-4 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 Pfam PF01799 [2Fe-2S] binding domain 88 174 1.5E-26 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 SUPERFAMILY SSF47741 99 186 1.57E-24 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 211 375 6.2E-50 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 SUPERFAMILY SSF54292 11 93 8.78E-15 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 PIRSF PIRSF036557 10 489 3.2E-161 T 11-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria ATC04_03145 317e614fc5dc4c52752bdda1a5eea399 491 SUPERFAMILY SSF56176 199 375 1.64E-53 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ATC04_14280 617ea13d4668b63af948b02194b33f59 155 SUPERFAMILY SSF55811 7 146 2.3E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_14280 617ea13d4668b63af948b02194b33f59 155 Gene3D G3DSA:3.90.79.10 3 140 9.7E-37 T 11-10-2018 ATC04_14280 617ea13d4668b63af948b02194b33f59 155 PRINTS PR00502 NUDIX hydrolase family signature 59 74 4.5E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATC04_14280 617ea13d4668b63af948b02194b33f59 155 PRINTS PR00502 NUDIX hydrolase family signature 45 59 4.5E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATC04_14280 617ea13d4668b63af948b02194b33f59 155 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATC04_14280 617ea13d4668b63af948b02194b33f59 155 Pfam PF00293 NUDIX domain 23 134 1.5E-19 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_02125 9bff0f0044160861457c29384e9eaef6 106 Gene3D G3DSA:3.10.20.30 1 106 2.1E-30 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ATC04_02125 9bff0f0044160861457c29384e9eaef6 106 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 40 50 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 ATC04_02125 9bff0f0044160861457c29384e9eaef6 106 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 91 4.7E-13 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ATC04_02125 9bff0f0044160861457c29384e9eaef6 106 SUPERFAMILY SSF54292 4 98 1.38E-28 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ATC04_02125 9bff0f0044160861457c29384e9eaef6 106 PRINTS PR00355 Adrenodoxin signature 59 73 2.0E-7 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 ATC04_02125 9bff0f0044160861457c29384e9eaef6 106 PRINTS PR00355 Adrenodoxin signature 83 91 2.0E-7 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 ATC04_02125 9bff0f0044160861457c29384e9eaef6 106 PRINTS PR00355 Adrenodoxin signature 40 50 2.0E-7 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 ATC04_17325 615bf900dec1de4ddc48782b8f4305d0 94 Gene3D G3DSA:3.40.50.1820 1 84 2.1E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_17325 615bf900dec1de4ddc48782b8f4305d0 94 SUPERFAMILY SSF53474 2 77 9.09E-13 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_15100 c86d665258fc900ed250256625aa46bf 144 SUPERFAMILY SSF50475 11 134 5.89E-25 T 11-10-2018 ATC04_15100 c86d665258fc900ed250256625aa46bf 144 Gene3D G3DSA:2.30.110.10 4 142 2.6E-40 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ATC04_15100 c86d665258fc900ed250256625aa46bf 144 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 16 132 4.1E-26 T 11-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related ATC04_05960 63de5d4e99498913abc5c90b1ba9a061 222 SMART SM00862 144 218 2.8E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_05960 63de5d4e99498913abc5c90b1ba9a061 222 Gene3D G3DSA:1.10.10.10 126 222 1.3E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_05960 63de5d4e99498913abc5c90b1ba9a061 222 SUPERFAMILY SSF46894 127 219 1.84E-28 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_05960 63de5d4e99498913abc5c90b1ba9a061 222 Gene3D G3DSA:3.40.50.2300 1 115 1.3E-32 T 11-10-2018 ATC04_05960 63de5d4e99498913abc5c90b1ba9a061 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 6.2E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_02815 dd01c1c0b4f987aabfbbc1fde25bf997 424 Gene3D G3DSA:3.30.1490.20 125 213 3.4E-5 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ATC04_02815 dd01c1c0b4f987aabfbbc1fde25bf997 424 SUPERFAMILY SSF56059 123 334 3.89E-22 T 11-10-2018 ATC04_02815 dd01c1c0b4f987aabfbbc1fde25bf997 424 Gene3D G3DSA:3.30.470.20 229 339 9.0E-7 T 11-10-2018 ATC04_07890 946cc5dfcef9787c5f86d8b96509ef6d 256 SUPERFAMILY SSF51366 4 256 4.95E-77 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ATC04_07890 946cc5dfcef9787c5f86d8b96509ef6d 256 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 44.791 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 ATC04_07890 946cc5dfcef9787c5f86d8b96509ef6d 256 Gene3D G3DSA:3.20.20.70 1 256 4.0E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_07890 946cc5dfcef9787c5f86d8b96509ef6d 256 Pfam PF00977 Histidine biosynthesis protein 6 238 1.0E-83 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 ATC04_07890 946cc5dfcef9787c5f86d8b96509ef6d 256 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 256 3.8E-102 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 ATC04_05370 ec473fca85863b7ad645a680665c3011 242 Pfam PF13350 Tyrosine phosphatase family 27 235 1.7E-24 T 11-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type ATC04_05370 ec473fca85863b7ad645a680665c3011 242 SUPERFAMILY SSF52799 14 236 1.84E-25 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like ATC04_05370 ec473fca85863b7ad645a680665c3011 242 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 136 146 - T 11-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 ATC04_05370 ec473fca85863b7ad645a680665c3011 242 Gene3D G3DSA:3.90.190.10 16 237 8.7E-28 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like ATC04_13420 8d4240d58916dc74d0017a88660ad630 209 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 11 72 3.2E-8 T 11-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 ATC04_13420 8d4240d58916dc74d0017a88660ad630 209 Gene3D G3DSA:1.20.120.450 1 102 1.2E-11 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_13420 8d4240d58916dc74d0017a88660ad630 209 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 10 189 1.6E-25 T 11-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type ATC04_13420 8d4240d58916dc74d0017a88660ad630 209 SUPERFAMILY SSF109854 3 123 7.32E-15 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_09490 628ec3f24773ca86d5f5ffeb1827a3d0 197 Pfam PF11241 Protein of unknown function (DUF3043) 29 193 6.9E-54 T 11-10-2018 IPR021403 Protein of unknown function DUF3043 ATC04_01875 a95f52f42fb124419d3e38da365c0db5 210 Gene3D G3DSA:1.10.357.10 3 194 5.0E-50 T 11-10-2018 ATC04_01875 a95f52f42fb124419d3e38da365c0db5 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 6 19 7.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01875 a95f52f42fb124419d3e38da365c0db5 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 7.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01875 a95f52f42fb124419d3e38da365c0db5 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 50 1.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01875 a95f52f42fb124419d3e38da365c0db5 210 SUPERFAMILY SSF48498 72 184 1.27E-18 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_01875 a95f52f42fb124419d3e38da365c0db5 210 Pfam PF08359 YsiA-like protein, C-terminal region 57 146 4.5E-5 T 11-10-2018 IPR013570 Transcription regulator YsiA, C-terminal ATC04_01875 a95f52f42fb124419d3e38da365c0db5 210 SUPERFAMILY SSF46689 5 74 4.93E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_06380 c4ea0f5ab7f7657e1b26cffaa7b7c018 98 SUPERFAMILY SSF50129 3 96 1.65E-33 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_06380 c4ea0f5ab7f7657e1b26cffaa7b7c018 98 Pfam PF00166 Chaperonin 10 Kd subunit 5 96 3.7E-35 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATC04_06380 c4ea0f5ab7f7657e1b26cffaa7b7c018 98 Gene3D G3DSA:2.30.33.40 2 98 3.9E-38 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 ATC04_06380 c4ea0f5ab7f7657e1b26cffaa7b7c018 98 SMART SM00883 4 96 1.4E-53 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATC04_06380 c4ea0f5ab7f7657e1b26cffaa7b7c018 98 PRINTS PR00297 10kDa chaperonin signature 62 74 6.2E-30 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATC04_06380 c4ea0f5ab7f7657e1b26cffaa7b7c018 98 PRINTS PR00297 10kDa chaperonin signature 83 96 6.2E-30 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATC04_06380 c4ea0f5ab7f7657e1b26cffaa7b7c018 98 PRINTS PR00297 10kDa chaperonin signature 5 20 6.2E-30 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATC04_06380 c4ea0f5ab7f7657e1b26cffaa7b7c018 98 PRINTS PR00297 10kDa chaperonin signature 27 48 6.2E-30 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATC04_06380 c4ea0f5ab7f7657e1b26cffaa7b7c018 98 ProSitePatterns PS00681 Chaperonins cpn10 signature. 5 29 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 ATC04_06380 c4ea0f5ab7f7657e1b26cffaa7b7c018 98 Hamap MF_00580 10 kDa chaperonin [groS]. 4 97 24.97 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATC04_10340 c9c9d65e4aca1234a867c9db64956b60 106 Pfam PF10611 Protein of unknown function (DUF2469) 1 100 7.0E-50 T 11-10-2018 IPR019592 Protein of unknown function DUF2469 ATC04_11505 69d72958ad5fc673234116ed6f2cd6ee 221 Gene3D G3DSA:3.40.50.2020 9 212 7.6E-53 T 11-10-2018 ATC04_11505 69d72958ad5fc673234116ed6f2cd6ee 221 Pfam PF00156 Phosphoribosyl transferase domain 27 186 1.2E-19 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ATC04_11505 69d72958ad5fc673234116ed6f2cd6ee 221 SUPERFAMILY SSF53271 9 217 2.17E-30 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ATC04_11505 69d72958ad5fc673234116ed6f2cd6ee 221 Gene3D G3DSA:3.30.1310.20 60 127 7.6E-53 T 11-10-2018 ATC04_00950 69b6c677386ec16fc373980ca4132b0b 110 Gene3D G3DSA:3.40.630.30 8 105 8.3E-25 T 11-10-2018 ATC04_00950 69b6c677386ec16fc373980ca4132b0b 110 SUPERFAMILY SSF55729 10 96 2.42E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_00950 69b6c677386ec16fc373980ca4132b0b 110 Pfam PF14542 GCN5-related N-acetyl-transferase 14 94 2.0E-22 T 11-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase ATC04_12215 c4960e9c5b6e08a217912d3403b46f16 271 SUPERFAMILY SSF52540 2 264 3.1E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12215 c4960e9c5b6e08a217912d3403b46f16 271 Gene3D G3DSA:3.40.50.300 1 268 1.5E-45 T 11-10-2018 ATC04_12215 c4960e9c5b6e08a217912d3403b46f16 271 Pfam PF13614 AAA domain 2 187 2.7E-23 T 11-10-2018 IPR025669 AAA domain ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 4.4E-19 T 11-10-2018 ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 4.4E-19 T 11-10-2018 ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 4.4E-19 T 11-10-2018 ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 4.4E-19 T 11-10-2018 ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 Gene3D G3DSA:3.30.390.30 320 404 4.3E-25 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 301 1.6E-64 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 Gene3D G3DSA:3.50.50.60 114 238 1.6E-107 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 SUPERFAMILY SSF55424 312 404 3.57E-21 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 SUPERFAMILY SSF51905 3 186 2.36E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 Gene3D G3DSA:3.50.50.60 5 308 1.6E-107 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 SUPERFAMILY SSF51905 145 310 5.9E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 Pfam PF14759 Reductase C-terminal 320 402 1.8E-20 T 11-10-2018 IPR028202 Reductase, C-terminal ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 4.4E-23 T 11-10-2018 ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 4.4E-23 T 11-10-2018 ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 4.4E-23 T 11-10-2018 ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 4.4E-23 T 11-10-2018 ATC04_14585 7889705e40dfd3be69f406f0ec2de789 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.4E-23 T 11-10-2018 ATC04_03115 875593e22c72a8ea82c2e00c1c2abbfa 522 Gene3D G3DSA:3.40.50.12780 4 413 6.0E-115 T 11-10-2018 ATC04_03115 875593e22c72a8ea82c2e00c1c2abbfa 522 Gene3D G3DSA:3.30.300.30 414 519 3.7E-29 T 11-10-2018 ATC04_03115 875593e22c72a8ea82c2e00c1c2abbfa 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 429 504 8.6E-18 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ATC04_03115 875593e22c72a8ea82c2e00c1c2abbfa 522 Pfam PF00501 AMP-binding enzyme 20 419 5.2E-103 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_03115 875593e22c72a8ea82c2e00c1c2abbfa 522 SUPERFAMILY SSF56801 9 517 1.07E-150 T 11-10-2018 ATC04_03115 875593e22c72a8ea82c2e00c1c2abbfa 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 170 181 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_03240 f55a5c1f0a96f5dc7d3861901e263fe0 387 Pfam PF00155 Aminotransferase class I and II 54 370 2.6E-48 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATC04_03240 f55a5c1f0a96f5dc7d3861901e263fe0 387 Gene3D G3DSA:3.90.1150.10 34 375 7.6E-111 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_03240 f55a5c1f0a96f5dc7d3861901e263fe0 387 Hamap MF_01513 Putative phenylalanine aminotransferase [pat]. 29 383 42.947 T 11-10-2018 IPR024892 Putative phenylalanine aminotransferase ATC04_03240 f55a5c1f0a96f5dc7d3861901e263fe0 387 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 28 382 46.542 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ATC04_03240 f55a5c1f0a96f5dc7d3861901e263fe0 387 SUPERFAMILY SSF53383 46 377 1.5E-71 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_03240 f55a5c1f0a96f5dc7d3861901e263fe0 387 Gene3D G3DSA:3.40.640.10 65 294 7.6E-111 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_06815 1fd45a81fe0a58cfbb560e4803a55e7d 275 SUPERFAMILY SSF161098 65 254 1.03E-35 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_06815 1fd45a81fe0a58cfbb560e4803a55e7d 275 Gene3D G3DSA:1.10.3720.10 57 272 4.4E-43 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_06815 1fd45a81fe0a58cfbb560e4803a55e7d 275 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 65 164 2.2E-20 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ATC04_06815 1fd45a81fe0a58cfbb560e4803a55e7d 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 269 1.8E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_03755 b694088a2b3dfd7c179078fa63495081 477 SUPERFAMILY SSF51905 5 452 6.91E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03755 b694088a2b3dfd7c179078fa63495081 477 Gene3D G3DSA:3.50.50.60 1 457 1.6E-157 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03755 b694088a2b3dfd7c179078fa63495081 477 PRINTS PR00757 Flavin-containing amine oxidase signature 294 313 1.1E-9 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 ATC04_03755 b694088a2b3dfd7c179078fa63495081 477 PRINTS PR00757 Flavin-containing amine oxidase signature 399 421 1.1E-9 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 ATC04_03755 b694088a2b3dfd7c179078fa63495081 477 PRINTS PR00757 Flavin-containing amine oxidase signature 430 447 1.1E-9 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 ATC04_03755 b694088a2b3dfd7c179078fa63495081 477 PRINTS PR00757 Flavin-containing amine oxidase signature 7 26 1.1E-9 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 ATC04_03755 b694088a2b3dfd7c179078fa63495081 477 SUPERFAMILY SSF54373 291 397 1.96E-26 T 11-10-2018 ATC04_03755 b694088a2b3dfd7c179078fa63495081 477 Pfam PF01593 Flavin containing amine oxidoreductase 16 449 1.6E-63 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 ATC04_03650 076ff60cc2b12bc354302d83f67e2fc2 254 Pfam PF02754 Cysteine-rich domain 140 224 2.0E-12 T 11-10-2018 IPR004017 Cysteine-rich domain ATC04_03650 076ff60cc2b12bc354302d83f67e2fc2 254 Pfam PF02754 Cysteine-rich domain 3 85 4.3E-16 T 11-10-2018 IPR004017 Cysteine-rich domain ATC04_03615 7fef37d721fbb78ab07b6a328825ef67 242 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 234 7.3E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_03615 7fef37d721fbb78ab07b6a328825ef67 242 SUPERFAMILY SSF161098 43 229 1.44E-36 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_03615 7fef37d721fbb78ab07b6a328825ef67 242 Gene3D G3DSA:1.10.3720.10 40 236 4.4E-31 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_06175 e52344f9bcd5bbdd8f9f72c5d62d2491 123 SUPERFAMILY SSF50193 2 122 6.41E-49 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 ATC04_06175 e52344f9bcd5bbdd8f9f72c5d62d2491 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06175 e52344f9bcd5bbdd8f9f72c5d62d2491 123 Pfam PF00238 Ribosomal protein L14p/L23e 2 123 1.8E-52 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ATC04_06175 e52344f9bcd5bbdd8f9f72c5d62d2491 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 5.9E-56 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 ATC04_06175 e52344f9bcd5bbdd8f9f72c5d62d2491 123 SMART SM01374 1 123 6.3E-82 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ATC04_06175 e52344f9bcd5bbdd8f9f72c5d62d2491 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 25.661 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ATC04_06175 e52344f9bcd5bbdd8f9f72c5d62d2491 123 Gene3D G3DSA:2.40.150.20 1 123 5.6E-51 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 ATC04_15020 8ea48f0bcc41557eb5e9007e50527369 239 Pfam PF13398 Peptidase M50B-like 28 230 1.2E-34 T 11-10-2018 ATC04_08790 813b3e904b9528623fec513304232ebb 560 Gene3D G3DSA:3.40.50.300 320 560 7.5E-35 T 11-10-2018 ATC04_08790 813b3e904b9528623fec513304232ebb 560 SUPERFAMILY SSF52540 346 549 9.23E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08790 813b3e904b9528623fec513304232ebb 560 SMART SM00382 356 549 5.5E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_08790 813b3e904b9528623fec513304232ebb 560 SMART SM00382 29 236 4.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_08790 813b3e904b9528623fec513304232ebb 560 Gene3D G3DSA:3.40.50.300 2 292 1.4E-45 T 11-10-2018 ATC04_08790 813b3e904b9528623fec513304232ebb 560 SUPERFAMILY SSF52540 4 236 1.9E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08790 813b3e904b9528623fec513304232ebb 560 Pfam PF00005 ABC transporter 351 496 7.8E-13 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_08790 813b3e904b9528623fec513304232ebb 560 Pfam PF00005 ABC transporter 22 191 2.9E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_02700 43cda4ceaef9e729fc831b8ba54ef93d 454 TIGRFAM TIGR00797 matE: MATE efflux family protein 31 404 6.7E-87 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ATC04_02700 43cda4ceaef9e729fc831b8ba54ef93d 454 Pfam PF01554 MatE 252 391 7.2E-14 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ATC04_02700 43cda4ceaef9e729fc831b8ba54ef93d 454 Pfam PF01554 MatE 31 190 6.0E-29 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ATC04_02700 43cda4ceaef9e729fc831b8ba54ef93d 454 PIRSF PIRSF006603 12 452 9.0E-55 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ATC04_10780 e53fba7001a213d602285e214f9ac1db 435 Pfam PF01610 Transposase 164 419 2.3E-60 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATC04_10780 e53fba7001a213d602285e214f9ac1db 435 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 88 1.4E-8 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger ATC04_14870 423b17aa1d7f2e66d97be1e06db897f5 485 Gene3D G3DSA:1.20.1720.10 27 234 2.2E-36 T 11-10-2018 ATC04_14870 423b17aa1d7f2e66d97be1e06db897f5 485 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 28 435 6.7E-84 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ATC04_14870 423b17aa1d7f2e66d97be1e06db897f5 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 30 54 1.9E-12 T 11-10-2018 ATC04_14870 423b17aa1d7f2e66d97be1e06db897f5 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 121 141 1.9E-12 T 11-10-2018 ATC04_14870 423b17aa1d7f2e66d97be1e06db897f5 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 151 175 1.9E-12 T 11-10-2018 ATC04_14870 423b17aa1d7f2e66d97be1e06db897f5 485 SUPERFAMILY SSF103473 13 482 1.96E-63 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_14870 423b17aa1d7f2e66d97be1e06db897f5 485 Pfam PF07690 Major Facilitator Superfamily 31 425 1.5E-48 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_14870 423b17aa1d7f2e66d97be1e06db897f5 485 Gene3D G3DSA:1.20.1250.20 272 478 6.4E-20 T 11-10-2018 ATC04_01045 5d43671a459b82a47f54d4ddf02f0762 389 Gene3D G3DSA:3.40.50.2300 152 379 3.0E-122 T 11-10-2018 ATC04_01045 5d43671a459b82a47f54d4ddf02f0762 389 SUPERFAMILY SSF53822 46 371 1.32E-64 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ATC04_01045 5d43671a459b82a47f54d4ddf02f0762 389 Pfam PF13407 Periplasmic binding protein domain 50 336 7.7E-61 T 11-10-2018 IPR025997 Periplasmic binding protein ATC04_01045 5d43671a459b82a47f54d4ddf02f0762 389 Gene3D G3DSA:3.40.50.2300 50 358 3.0E-122 T 11-10-2018 ATC04_06195 4224ea186d72d6934553f77c84e43dd3 178 PIRSF PIRSF002162 1 177 6.8E-49 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06195 4224ea186d72d6934553f77c84e43dd3 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.5E-74 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ATC04_06195 4224ea186d72d6934553f77c84e43dd3 178 Gene3D G3DSA:3.90.930.12 1 82 3.6E-30 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06195 4224ea186d72d6934553f77c84e43dd3 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 6.2E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ATC04_06195 4224ea186d72d6934553f77c84e43dd3 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 6.2E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ATC04_06195 4224ea186d72d6934553f77c84e43dd3 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 6.2E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ATC04_06195 4224ea186d72d6934553f77c84e43dd3 178 Pfam PF00347 Ribosomal protein L6 91 164 1.5E-19 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06195 4224ea186d72d6934553f77c84e43dd3 178 Pfam PF00347 Ribosomal protein L6 11 82 2.4E-20 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06195 4224ea186d72d6934553f77c84e43dd3 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.135 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ATC04_06195 4224ea186d72d6934553f77c84e43dd3 178 Gene3D G3DSA:3.90.930.12 83 178 3.6E-39 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06195 4224ea186d72d6934553f77c84e43dd3 178 SUPERFAMILY SSF56053 83 176 2.49E-36 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06195 4224ea186d72d6934553f77c84e43dd3 178 SUPERFAMILY SSF56053 1 82 2.16E-26 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06855 079a30758b4e6ced7426932d3e2c0dbf 133 Pfam PF02416 mttA/Hcf106 family 9 42 1.9E-5 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ATC04_06855 079a30758b4e6ced7426932d3e2c0dbf 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 23 42 4.6E-9 T 11-10-2018 ATC04_06855 079a30758b4e6ced7426932d3e2c0dbf 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 3 23 4.6E-9 T 11-10-2018 ATC04_06855 079a30758b4e6ced7426932d3e2c0dbf 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 42 60 4.6E-9 T 11-10-2018 ATC04_04415 67a6aa632857052064dfe8cc3e84e0fa 349 Gene3D G3DSA:1.10.3470.10 22 347 1.0E-85 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_04415 67a6aa632857052064dfe8cc3e84e0fa 349 SUPERFAMILY SSF81345 25 341 1.12E-70 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_04415 67a6aa632857052064dfe8cc3e84e0fa 349 Pfam PF01032 FecCD transport family 33 341 3.8E-81 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ATC04_10295 d6fa290d28d7cff380d4f94c8bbd0fdf 81 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 37 77 5.0E-13 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ATC04_10295 d6fa290d28d7cff380d4f94c8bbd0fdf 81 SUPERFAMILY SSF47336 3 79 2.36E-19 T 11-10-2018 IPR036736 ACP-like superfamily ATC04_10295 d6fa290d28d7cff380d4f94c8bbd0fdf 81 Gene3D G3DSA:1.10.1200.10 2 79 6.6E-23 T 11-10-2018 IPR036736 ACP-like superfamily ATC04_10295 d6fa290d28d7cff380d4f94c8bbd0fdf 81 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 16.545 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ATC04_10295 d6fa290d28d7cff380d4f94c8bbd0fdf 81 Pfam PF00550 Phosphopantetheine attachment site 11 76 8.4E-14 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain ATC04_13360 9a96e366c55e2ad53ad73909212a9095 271 Gene3D G3DSA:3.40.50.10490 10 215 5.2E-88 T 11-10-2018 ATC04_13360 9a96e366c55e2ad53ad73909212a9095 271 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 ATC04_13360 9a96e366c55e2ad53ad73909212a9095 271 Pfam PF00318 Ribosomal protein S2 9 225 2.7E-94 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_13360 9a96e366c55e2ad53ad73909212a9095 271 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 236 41.109 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_13360 9a96e366c55e2ad53ad73909212a9095 271 PRINTS PR00395 Ribosomal protein S2 signature 159 176 6.5E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_13360 9a96e366c55e2ad53ad73909212a9095 271 PRINTS PR00395 Ribosomal protein S2 signature 176 187 6.5E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_13360 9a96e366c55e2ad53ad73909212a9095 271 PRINTS PR00395 Ribosomal protein S2 signature 6 24 6.5E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_13360 9a96e366c55e2ad53ad73909212a9095 271 PRINTS PR00395 Ribosomal protein S2 signature 197 211 6.5E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_13360 9a96e366c55e2ad53ad73909212a9095 271 PRINTS PR00395 Ribosomal protein S2 signature 37 46 6.5E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_13360 9a96e366c55e2ad53ad73909212a9095 271 PRINTS PR00395 Ribosomal protein S2 signature 87 104 6.5E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_13360 9a96e366c55e2ad53ad73909212a9095 271 SUPERFAMILY SSF52313 6 226 5.89E-90 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily ATC04_13360 9a96e366c55e2ad53ad73909212a9095 271 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 2.9E-103 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_13360 9a96e366c55e2ad53ad73909212a9095 271 Gene3D G3DSA:1.10.287.610 97 153 5.2E-88 T 11-10-2018 ATC04_16365 c93ade0c03ce2da8b902257d804af215 434 Pfam PF00463 Isocitrate lyase family 17 257 9.1E-56 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ATC04_16365 c93ade0c03ce2da8b902257d804af215 434 Pfam PF00463 Isocitrate lyase family 258 427 5.9E-45 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ATC04_16365 c93ade0c03ce2da8b902257d804af215 434 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 ATC04_16365 c93ade0c03ce2da8b902257d804af215 434 Gene3D G3DSA:3.20.20.60 4 434 4.2E-173 T 11-10-2018 ATC04_16365 c93ade0c03ce2da8b902257d804af215 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 433 6.0E-83 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ATC04_16365 c93ade0c03ce2da8b902257d804af215 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 13 257 4.9E-112 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ATC04_16365 c93ade0c03ce2da8b902257d804af215 434 SUPERFAMILY SSF51621 8 433 6.28E-157 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ATC04_16365 c93ade0c03ce2da8b902257d804af215 434 PIRSF PIRSF001362 3 434 3.5E-235 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ATC04_07425 618e51c90ef17886ef6eef93d7701171 446 SUPERFAMILY SSF54368 8 102 1.09E-29 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATC04_07425 618e51c90ef17886ef6eef93d7701171 446 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ATC04_07425 618e51c90ef17886ef6eef93d7701171 446 SUPERFAMILY SSF55931 105 444 8.04E-117 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ATC04_07425 618e51c90ef17886ef6eef93d7701171 446 SMART SM01230 104 356 8.8E-121 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATC04_07425 618e51c90ef17886ef6eef93d7701171 446 Pfam PF00120 Glutamine synthetase, catalytic domain 105 442 1.3E-123 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATC04_07425 618e51c90ef17886ef6eef93d7701171 446 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 98 7.4E-28 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ATC04_07425 618e51c90ef17886ef6eef93d7701171 446 Gene3D G3DSA:3.10.20.70 2 106 7.9E-35 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATC04_07425 618e51c90ef17886ef6eef93d7701171 446 Gene3D G3DSA:3.30.590.10 107 444 1.3E-122 T 11-10-2018 ATC04_07425 618e51c90ef17886ef6eef93d7701171 446 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 443 1.5E-135 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATC04_07425 618e51c90ef17886ef6eef93d7701171 446 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 233 248 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ATC04_03855 2edfac8bca1f4f3492f77fe572714bfa 229 Gene3D G3DSA:3.40.50.1000 2 197 2.3E-41 T 11-10-2018 IPR023214 HAD superfamily ATC04_03855 2edfac8bca1f4f3492f77fe572714bfa 229 Gene3D G3DSA:1.10.150.240 19 86 2.3E-41 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ATC04_03855 2edfac8bca1f4f3492f77fe572714bfa 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 193 5.1E-19 T 11-10-2018 ATC04_03855 2edfac8bca1f4f3492f77fe572714bfa 229 TIGRFAM TIGR03351 PhnX-like: phosphonatase-like hydrolase 2 222 2.4E-78 T 11-10-2018 IPR022468 Phosphonatase-like hydrolase ATC04_03855 2edfac8bca1f4f3492f77fe572714bfa 229 SUPERFAMILY SSF56784 2 223 8.14E-45 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_13640 09966d4b8631c49d570fd3710344da28 559 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 557 5.9E-266 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATC04_13640 09966d4b8631c49d570fd3710344da28 559 Gene3D G3DSA:3.40.1770.10 17 545 1.3E-242 T 11-10-2018 ATC04_13640 09966d4b8631c49d570fd3710344da28 559 Pfam PF01175 Urocanase Rossmann-like domain 141 352 1.5E-76 T 11-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATC04_13640 09966d4b8631c49d570fd3710344da28 559 ProSitePatterns PS01233 Urocanase signature. 445 460 - T 11-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATC04_13640 09966d4b8631c49d570fd3710344da28 559 Pfam PF17392 Urocanase C-terminal domain 355 549 8.2E-93 T 11-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATC04_13640 09966d4b8631c49d570fd3710344da28 559 Hamap MF_00577 Urocanate hydratase [hutU]. 1 559 48.843 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATC04_13640 09966d4b8631c49d570fd3710344da28 559 Gene3D G3DSA:3.40.50.10730 142 352 1.3E-242 T 11-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATC04_13640 09966d4b8631c49d570fd3710344da28 559 PIRSF PIRSF001423 1 559 1.6E-269 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATC04_13640 09966d4b8631c49d570fd3710344da28 559 SUPERFAMILY SSF111326 6 558 3.92E-242 T 11-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATC04_13640 09966d4b8631c49d570fd3710344da28 559 Pfam PF17391 Urocanase N-terminal domain 12 138 2.9E-60 T 11-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATC04_03285 c28bfad19cf7eab5b6ff323c6e4d3458 184 SUPERFAMILY SSF52317 6 182 1.23E-42 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_03285 c28bfad19cf7eab5b6ff323c6e4d3458 184 Gene3D G3DSA:3.40.50.880 1 184 1.3E-48 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_03285 c28bfad19cf7eab5b6ff323c6e4d3458 184 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 182 6.6E-47 T 11-10-2018 IPR006286 Deglycase PfpI ATC04_03285 c28bfad19cf7eab5b6ff323c6e4d3458 184 Pfam PF01965 DJ-1/PfpI family 7 181 2.5E-44 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ATC04_08850 756bbc4efc80c104dca0c32383430cf9 76 SUPERFAMILY SSF52833 1 70 4.56E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_08850 756bbc4efc80c104dca0c32383430cf9 76 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 72 1.5E-31 T 11-10-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 ATC04_08850 756bbc4efc80c104dca0c32383430cf9 76 Pfam PF00462 Glutaredoxin 3 61 2.1E-14 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ATC04_08850 756bbc4efc80c104dca0c32383430cf9 76 Gene3D G3DSA:3.40.30.10 1 75 2.8E-28 T 11-10-2018 ATC04_16520 d2b9e6b14513be8e14d4942232a8f4ea 137 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 5 136 25.913 T 11-10-2018 IPR023006 Uncharacterised protein family UPF0225 ATC04_16520 d2b9e6b14513be8e14d4942232a8f4ea 137 Gene3D G3DSA:3.10.450.50 2 137 7.7E-37 T 11-10-2018 ATC04_16520 d2b9e6b14513be8e14d4942232a8f4ea 137 SUPERFAMILY SSF54427 37 135 1.35E-32 T 11-10-2018 IPR032710 NTF2-like domain superfamily ATC04_05580 865d734276fa03298fa1c3db30416715 162 SUPERFAMILY SSF89963 6 89 1.31E-28 T 11-10-2018 IPR036183 YajQ-like superfamily ATC04_05580 865d734276fa03298fa1c3db30416715 162 Gene3D G3DSA:3.30.70.860 6 162 5.2E-55 T 11-10-2018 IPR035571 UPF0234-like, C-terminal ATC04_05580 865d734276fa03298fa1c3db30416715 162 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 162 23.33 T 11-10-2018 IPR007551 Protein of unknown function DUF520 ATC04_05580 865d734276fa03298fa1c3db30416715 162 SUPERFAMILY SSF89963 91 162 8.89E-21 T 11-10-2018 IPR036183 YajQ-like superfamily ATC04_05580 865d734276fa03298fa1c3db30416715 162 Pfam PF04461 Protein of unknown function (DUF520) 5 162 1.5E-57 T 11-10-2018 IPR007551 Protein of unknown function DUF520 ATC04_05580 865d734276fa03298fa1c3db30416715 162 Gene3D G3DSA:3.30.70.990 12 100 5.2E-55 T 11-10-2018 IPR035570 UPF0234, N-terminal ATC04_06345 5059cf11eae8348fdf70df963b118f48 230 Pfam PF00814 Glycoprotease family 38 137 3.4E-20 T 11-10-2018 IPR000905 Gcp-like domain ATC04_06345 5059cf11eae8348fdf70df963b118f48 230 Gene3D G3DSA:3.30.420.40 97 181 1.6E-37 T 11-10-2018 ATC04_06345 5059cf11eae8348fdf70df963b118f48 230 SUPERFAMILY SSF53067 4 106 1.81E-18 T 11-10-2018 ATC04_06345 5059cf11eae8348fdf70df963b118f48 230 SUPERFAMILY SSF53067 115 199 9.45E-7 T 11-10-2018 ATC04_06345 5059cf11eae8348fdf70df963b118f48 230 Gene3D G3DSA:3.30.420.40 5 212 1.6E-37 T 11-10-2018 ATC04_06345 5059cf11eae8348fdf70df963b118f48 230 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 210 1.4E-41 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 ATC04_06870 280a00d0bc529620446cee29d1d1fe80 416 SUPERFAMILY SSF54631 283 412 3.77E-20 T 11-10-2018 ATC04_06870 280a00d0bc529620446cee29d1d1fe80 416 Pfam PF00571 CBS domain 368 408 0.0024 T 11-10-2018 IPR000644 CBS domain ATC04_06870 280a00d0bc529620446cee29d1d1fe80 416 SUPERFAMILY SSF158791 169 281 6.15E-29 T 11-10-2018 ATC04_06870 280a00d0bc529620446cee29d1d1fe80 416 Gene3D G3DSA:1.25.60.10 160 279 1.6E-23 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily ATC04_06870 280a00d0bc529620446cee29d1d1fe80 416 Gene3D G3DSA:3.10.580.10 281 409 1.9E-25 T 11-10-2018 ATC04_06870 280a00d0bc529620446cee29d1d1fe80 416 SMART SM00924 181 284 8.2E-35 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain ATC04_06870 280a00d0bc529620446cee29d1d1fe80 416 Pfam PF03448 MgtE intracellular N domain 181 281 7.3E-26 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain ATC04_16620 61e542383f89853a3fc8fc49fb658dd7 414 SUPERFAMILY SSF47203 242 383 5.71E-15 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_16620 61e542383f89853a3fc8fc49fb658dd7 414 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 128 5.6E-5 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_16620 61e542383f89853a3fc8fc49fb658dd7 414 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 222 2.6E-10 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_16620 61e542383f89853a3fc8fc49fb658dd7 414 PIRSF PIRSF016578 7 392 3.7E-36 T 11-10-2018 ATC04_16620 61e542383f89853a3fc8fc49fb658dd7 414 SUPERFAMILY SSF56645 32 230 1.11E-44 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_16620 61e542383f89853a3fc8fc49fb658dd7 414 Gene3D G3DSA:1.20.140.10 230 404 1.8E-55 T 11-10-2018 ATC04_16620 61e542383f89853a3fc8fc49fb658dd7 414 Gene3D G3DSA:1.10.540.10 18 132 2.0E-18 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_16620 61e542383f89853a3fc8fc49fb658dd7 414 Gene3D G3DSA:2.40.110.10 133 229 2.4E-28 T 11-10-2018 ATC04_16620 61e542383f89853a3fc8fc49fb658dd7 414 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 247 382 3.3E-18 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ATC04_05010 8358c3a9bb722302ba6c65bf04debb7a 217 Pfam PF13845 Septum formation 100 177 8.4E-8 T 11-10-2018 IPR026004 Septum formation-related domain ATC04_05010 8358c3a9bb722302ba6c65bf04debb7a 217 Pfam PF13845 Septum formation 86 177 4.4E-8 T 11-10-2018 IPR026004 Septum formation-related domain ATC04_17485 558d3345f614c35346a015ab20c1deef 168 Gene3D G3DSA:3.40.630.30 5 138 9.3E-32 T 11-10-2018 ATC04_17485 558d3345f614c35346a015ab20c1deef 168 SUPERFAMILY SSF55729 3 123 1.83E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_17485 558d3345f614c35346a015ab20c1deef 168 Pfam PF00583 Acetyltransferase (GNAT) family 38 120 9.8E-14 T 11-10-2018 IPR000182 GNAT domain ATC04_06100 93c4ebe42c9666c4dd2308281fc573ac 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06100 93c4ebe42c9666c4dd2308281fc573ac 102 SMART SM01403 7 101 6.5E-55 T 11-10-2018 IPR027486 Ribosomal protein S10 domain ATC04_06100 93c4ebe42c9666c4dd2308281fc573ac 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.3E-34 T 11-10-2018 IPR027486 Ribosomal protein S10 domain ATC04_06100 93c4ebe42c9666c4dd2308281fc573ac 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.116 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06100 93c4ebe42c9666c4dd2308281fc573ac 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 2.2E-45 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06100 93c4ebe42c9666c4dd2308281fc573ac 102 Gene3D G3DSA:3.30.70.600 1 102 1.6E-36 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily ATC04_06100 93c4ebe42c9666c4dd2308281fc573ac 102 SUPERFAMILY SSF54999 5 102 3.14E-37 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily ATC04_06100 93c4ebe42c9666c4dd2308281fc573ac 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.0E-21 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06100 93c4ebe42c9666c4dd2308281fc573ac 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.0E-21 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06100 93c4ebe42c9666c4dd2308281fc573ac 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.0E-21 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_10575 9fdfb6b18969c1c5ff517346e8f7e288 256 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 1 255 3.3E-71 T 11-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 ATC04_10575 9fdfb6b18969c1c5ff517346e8f7e288 256 Gene3D G3DSA:3.40.50.12580 65 242 7.2E-48 T 11-10-2018 ATC04_10575 9fdfb6b18969c1c5ff517346e8f7e288 256 SUPERFAMILY SSF53756 24 254 1.32E-16 T 11-10-2018 ATC04_07945 f7bf2200f1e76a37c0c8cb0b367f3bf4 489 Gene3D G3DSA:3.50.50.60 250 402 4.3E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_07945 f7bf2200f1e76a37c0c8cb0b367f3bf4 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 1.4E-24 T 11-10-2018 ATC04_07945 f7bf2200f1e76a37c0c8cb0b367f3bf4 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 1.4E-24 T 11-10-2018 ATC04_07945 f7bf2200f1e76a37c0c8cb0b367f3bf4 489 PRINTS PR00419 Adrenodoxin reductase family signature 285 299 1.4E-24 T 11-10-2018 ATC04_07945 f7bf2200f1e76a37c0c8cb0b367f3bf4 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 1.4E-24 T 11-10-2018 ATC04_07945 f7bf2200f1e76a37c0c8cb0b367f3bf4 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 476 1.1E-186 T 11-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 ATC04_07945 f7bf2200f1e76a37c0c8cb0b367f3bf4 489 SUPERFAMILY SSF51971 387 472 3.41E-10 T 11-10-2018 ATC04_07945 f7bf2200f1e76a37c0c8cb0b367f3bf4 489 SUPERFAMILY SSF51971 143 403 2.0E-64 T 11-10-2018 ATC04_07945 f7bf2200f1e76a37c0c8cb0b367f3bf4 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 457 1.1E-26 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_07945 f7bf2200f1e76a37c0c8cb0b367f3bf4 489 Gene3D G3DSA:3.40.50.720 141 249 3.7E-16 T 11-10-2018 ATC04_07945 f7bf2200f1e76a37c0c8cb0b367f3bf4 489 Gene3D G3DSA:1.10.1060.10 14 138 8.4E-19 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ATC04_07945 f7bf2200f1e76a37c0c8cb0b367f3bf4 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 27 127 2.2E-20 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 ATC04_07945 f7bf2200f1e76a37c0c8cb0b367f3bf4 489 SUPERFAMILY SSF46548 10 155 8.89E-31 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ATC04_10510 03564b3c9632befd231eee0018a5f038 396 SUPERFAMILY SSF52540 190 395 1.5E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10510 03564b3c9632befd231eee0018a5f038 396 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 122 394 1.2E-103 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ATC04_10510 03564b3c9632befd231eee0018a5f038 396 SUPERFAMILY SSF47364 93 172 3.53E-19 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 ATC04_10510 03564b3c9632befd231eee0018a5f038 396 Pfam PF00448 SRP54-type protein, GTPase domain 195 394 1.7E-73 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATC04_10510 03564b3c9632befd231eee0018a5f038 396 SMART SM00962 195 395 1.3E-106 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATC04_10510 03564b3c9632befd231eee0018a5f038 396 Gene3D G3DSA:1.20.120.140 96 393 3.9E-101 T 11-10-2018 ATC04_10510 03564b3c9632befd231eee0018a5f038 396 SMART SM00382 194 371 2.5E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_10510 03564b3c9632befd231eee0018a5f038 396 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 368 381 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATC04_10510 03564b3c9632befd231eee0018a5f038 396 Gene3D G3DSA:3.40.50.300 195 383 3.9E-101 T 11-10-2018 ATC04_10510 03564b3c9632befd231eee0018a5f038 396 SMART SM00963 98 178 1.3E-19 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATC04_10510 03564b3c9632befd231eee0018a5f038 396 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 121 395 60.11 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ATC04_10510 03564b3c9632befd231eee0018a5f038 396 Pfam PF02881 SRP54-type protein, helical bundle domain 110 174 8.3E-12 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATC04_06730 37d24f85b2741032eba84a912758124b 98 SUPERFAMILY SSF89360 2 85 2.16E-6 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ATC04_16455 af197ece554f8f725e6be5fadaf536f8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 101 117 5.1E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_16455 af197ece554f8f725e6be5fadaf536f8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 97 5.1E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_16455 af197ece554f8f725e6be5fadaf536f8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 131 151 5.1E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_16455 af197ece554f8f725e6be5fadaf536f8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 81 5.1E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_16455 af197ece554f8f725e6be5fadaf536f8 158 SMART SM00347 41 141 2.3E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_16455 af197ece554f8f725e6be5fadaf536f8 158 Gene3D G3DSA:1.10.10.10 8 152 4.7E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16455 af197ece554f8f725e6be5fadaf536f8 158 SUPERFAMILY SSF46785 25 152 5.69E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_16455 af197ece554f8f725e6be5fadaf536f8 158 Pfam PF12802 MarR family 48 104 2.5E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_09540 7db4c8e5e904ecf0e29b88094f103dc1 264 Gene3D G3DSA:1.10.760.10 1 131 7.9E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATC04_09540 7db4c8e5e904ecf0e29b88094f103dc1 264 PIRSF PIRSF000007 1 263 2.5E-102 T 11-10-2018 IPR009152 Cytochrome bc1 complex, cytochrome c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 ATC04_09540 7db4c8e5e904ecf0e29b88094f103dc1 264 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 145 218 1.4E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09540 7db4c8e5e904ecf0e29b88094f103dc1 264 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 50 124 7.7E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09540 7db4c8e5e904ecf0e29b88094f103dc1 264 SUPERFAMILY SSF46626 126 220 5.17E-28 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATC04_09540 7db4c8e5e904ecf0e29b88094f103dc1 264 Gene3D G3DSA:1.10.760.10 144 226 1.3E-11 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATC04_09540 7db4c8e5e904ecf0e29b88094f103dc1 264 SUPERFAMILY SSF46626 8 129 8.65E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATC04_06665 97ce8a615e4291ba5173da8843e017e1 361 PIRSF PIRSF005508 5 358 5.6E-137 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ATC04_06665 97ce8a615e4291ba5173da8843e017e1 361 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 16 345 5.1E-130 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ATC04_06665 97ce8a615e4291ba5173da8843e017e1 361 Pfam PF01758 Sodium Bile acid symporter family 61 257 2.8E-58 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ATC04_06665 97ce8a615e4291ba5173da8843e017e1 361 Gene3D G3DSA:1.20.1530.20 10 351 6.1E-26 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily ATC04_00135 6270efb04380d8ae5de761592c29172b 106 Gene3D G3DSA:3.30.60.230 1 59 1.4E-21 T 11-10-2018 ATC04_00135 6270efb04380d8ae5de761592c29172b 106 Pfam PF11774 Lsr2 1 96 7.8E-29 T 11-10-2018 IPR024412 Lsr2 ATC04_00135 6270efb04380d8ae5de761592c29172b 106 ProDom PD026347 LSR2-LIKE LSR2 ANTIGEN IMMUNE PRECURSOR RESPONSE SIGNAL PLASMID LYSYL GP61 1 93 1.0E-18 T 11-10-2018 IPR024412 Lsr2 ATC04_00135 6270efb04380d8ae5de761592c29172b 106 Gene3D G3DSA:1.20.890.50 64 102 4.5E-11 T 11-10-2018 ATC04_15795 c6f7db9156552ee52458c0b1d84ccc19 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 267 8.7E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_15795 c6f7db9156552ee52458c0b1d84ccc19 282 Gene3D G3DSA:1.10.3720.10 10 273 1.4E-53 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_15795 c6f7db9156552ee52458c0b1d84ccc19 282 SUPERFAMILY SSF161098 16 282 5.51E-60 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_15995 71901dd9698b261510ab507eb0554414 160 Pfam PF01967 MoaC family 16 149 9.9E-52 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15995 71901dd9698b261510ab507eb0554414 160 SUPERFAMILY SSF55040 12 154 6.15E-57 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15995 71901dd9698b261510ab507eb0554414 160 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 5 151 4.1E-61 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15995 71901dd9698b261510ab507eb0554414 160 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 3 157 35.147 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15995 71901dd9698b261510ab507eb0554414 160 Gene3D G3DSA:3.30.70.640 2 160 7.9E-64 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_11960 0ed8afa95039af55692fb6b9c2620f32 215 Pfam PF08281 Sigma-70, region 4 139 187 2.6E-12 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATC04_11960 0ed8afa95039af55692fb6b9c2620f32 215 SUPERFAMILY SSF88659 134 191 1.36E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ATC04_11960 0ed8afa95039af55692fb6b9c2620f32 215 Pfam PF04542 Sigma-70 region 2 32 95 7.6E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_11960 0ed8afa95039af55692fb6b9c2620f32 215 SUPERFAMILY SSF88946 20 109 1.57E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_11960 0ed8afa95039af55692fb6b9c2620f32 215 Gene3D G3DSA:1.10.10.10 129 196 1.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_11960 0ed8afa95039af55692fb6b9c2620f32 215 TIGRFAM TIGR02947 SigH_actino: RNA polymerase sigma-70 factor, TIGR02947 family 16 204 9.3E-107 T 11-10-2018 IPR014293 RNA polymerase sigma-70, actinobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATC04_11960 0ed8afa95039af55692fb6b9c2620f32 215 Gene3D G3DSA:1.10.1740.10 12 97 1.3E-34 T 11-10-2018 ATC04_11960 0ed8afa95039af55692fb6b9c2620f32 215 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 191 7.2E-26 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ATC04_01130 38fca03158d02c204e277c09b8278a39 420 Pfam PF07690 Major Facilitator Superfamily 249 392 1.0E-9 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_01130 38fca03158d02c204e277c09b8278a39 420 Pfam PF07690 Major Facilitator Superfamily 21 238 3.2E-25 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_01130 38fca03158d02c204e277c09b8278a39 420 PRINTS PR01035 Tetracycline resistance protein signature 256 276 9.7E-15 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_01130 38fca03158d02c204e277c09b8278a39 420 PRINTS PR01035 Tetracycline resistance protein signature 169 189 9.7E-15 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_01130 38fca03158d02c204e277c09b8278a39 420 PRINTS PR01035 Tetracycline resistance protein signature 27 43 9.7E-15 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_01130 38fca03158d02c204e277c09b8278a39 420 PRINTS PR01035 Tetracycline resistance protein signature 141 163 9.7E-15 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_01130 38fca03158d02c204e277c09b8278a39 420 SUPERFAMILY SSF103473 17 396 2.35E-49 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_01130 38fca03158d02c204e277c09b8278a39 420 Gene3D G3DSA:1.20.1250.20 13 394 3.6E-48 T 11-10-2018 ATC04_03510 856b701a72ec3f9713ae6c0fc8d5527d 310 Pfam PF03466 LysR substrate binding domain 92 291 7.2E-23 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_03510 856b701a72ec3f9713ae6c0fc8d5527d 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.8E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_03510 856b701a72ec3f9713ae6c0fc8d5527d 310 Gene3D G3DSA:1.10.10.10 9 91 5.5E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03510 856b701a72ec3f9713ae6c0fc8d5527d 310 Gene3D G3DSA:3.40.190.290 95 289 6.2E-26 T 11-10-2018 ATC04_03510 856b701a72ec3f9713ae6c0fc8d5527d 310 SUPERFAMILY SSF53850 93 293 1.38E-26 T 11-10-2018 ATC04_03510 856b701a72ec3f9713ae6c0fc8d5527d 310 SUPERFAMILY SSF46785 10 116 2.06E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_15880 97d5160969c1d01a5d87463904e1a6f6 69 Pfam PF07866 Protein of unknown function (DUF1653) 6 66 6.2E-24 T 11-10-2018 IPR023387 DUF1653-like domain ATC04_15880 97d5160969c1d01a5d87463904e1a6f6 69 Gene3D G3DSA:2.30.30.320 1 69 2.0E-26 T 11-10-2018 IPR037135 DUF1653-like domain superfamily ATC04_11300 5c92c357128fa14d6de0456f20b3d7f8 273 SUPERFAMILY SSF54001 125 232 2.16E-33 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ATC04_11300 5c92c357128fa14d6de0456f20b3d7f8 273 Pfam PF00877 NlpC/P60 family 141 232 4.1E-25 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ATC04_11300 5c92c357128fa14d6de0456f20b3d7f8 273 Gene3D G3DSA:3.90.1720.10 46 244 3.4E-44 T 11-10-2018 ATC04_05070 6f1b9a7954f535130f368beac596eb4c 301 SUPERFAMILY SSF56104 11 299 6.21E-94 T 11-10-2018 ATC04_05070 6f1b9a7954f535130f368beac596eb4c 301 ProSitePatterns PS01057 SAICAR synthetase signature 1. 104 118 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATC04_05070 6f1b9a7954f535130f368beac596eb4c 301 Pfam PF01259 SAICAR synthetase 17 268 7.4E-101 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATC04_05070 6f1b9a7954f535130f368beac596eb4c 301 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 14 296 24.061 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATC04_05070 6f1b9a7954f535130f368beac596eb4c 301 Gene3D G3DSA:3.30.470.20 103 248 7.9E-56 T 11-10-2018 ATC04_05070 6f1b9a7954f535130f368beac596eb4c 301 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 17 298 5.4E-73 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 ATC04_05070 6f1b9a7954f535130f368beac596eb4c 301 Gene3D G3DSA:3.30.200.20 4 102 1.2E-32 T 11-10-2018 ATC04_13945 321da57c5aa02ba3cab36a1854a2163b 246 Gene3D G3DSA:3.40.50.720 2 245 1.3E-24 T 11-10-2018 ATC04_13945 321da57c5aa02ba3cab36a1854a2163b 246 Pfam PF13460 NAD(P)H-binding 7 174 1.4E-6 T 11-10-2018 IPR016040 NAD(P)-binding domain ATC04_13945 321da57c5aa02ba3cab36a1854a2163b 246 SUPERFAMILY SSF51735 1 212 1.26E-24 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_09325 556b8c39a418057b120e2ac55b19dd0f 326 Gene3D G3DSA:3.90.550.10 1 182 6.3E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_09325 556b8c39a418057b120e2ac55b19dd0f 326 SUPERFAMILY SSF53448 2 189 1.13E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_09325 556b8c39a418057b120e2ac55b19dd0f 326 Pfam PF00535 Glycosyl transferase family 2 2 124 4.0E-20 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATC04_04140 4b2005c680cc8435e38c9e27d85c4bde 107 Pfam PF13411 MerR HTH family regulatory protein 16 81 9.4E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_04140 4b2005c680cc8435e38c9e27d85c4bde 107 ProSitePatterns PS00552 MerR-type HTH domain signature. 18 40 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_04140 4b2005c680cc8435e38c9e27d85c4bde 107 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 27 1.9E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_04140 4b2005c680cc8435e38c9e27d85c4bde 107 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 27 40 1.9E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_04140 4b2005c680cc8435e38c9e27d85c4bde 107 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 50 70 1.9E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_04140 4b2005c680cc8435e38c9e27d85c4bde 107 SMART SM00422 15 83 1.6E-23 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_04140 4b2005c680cc8435e38c9e27d85c4bde 107 Gene3D G3DSA:1.10.1660.10 8 107 2.2E-22 T 11-10-2018 ATC04_04140 4b2005c680cc8435e38c9e27d85c4bde 107 SUPERFAMILY SSF46955 16 99 5.95E-19 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_07745 37672d3d97f3edb1b152d61b2da2db0a 243 Gene3D G3DSA:3.40.50.720 12 237 9.7E-28 T 11-10-2018 ATC04_07745 37672d3d97f3edb1b152d61b2da2db0a 243 Pfam PF00106 short chain dehydrogenase 12 170 1.1E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_07745 37672d3d97f3edb1b152d61b2da2db0a 243 SUPERFAMILY SSF51735 11 226 1.17E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_07745 37672d3d97f3edb1b152d61b2da2db0a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_07745 37672d3d97f3edb1b152d61b2da2db0a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_07745 37672d3d97f3edb1b152d61b2da2db0a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_07745 37672d3d97f3edb1b152d61b2da2db0a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_08245 9209d452643734b27a3c60646e4a7940 506 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 256 272 3.8E-48 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATC04_08245 9209d452643734b27a3c60646e4a7940 506 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 186 214 3.8E-48 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATC04_08245 9209d452643734b27a3c60646e4a7940 506 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 162 175 3.8E-48 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATC04_08245 9209d452643734b27a3c60646e4a7940 506 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 345 371 3.8E-48 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATC04_08245 9209d452643734b27a3c60646e4a7940 506 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 255 3.8E-48 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATC04_08245 9209d452643734b27a3c60646e4a7940 506 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 19 505 83.295 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATC04_08245 9209d452643734b27a3c60646e4a7940 506 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 196 202 - T 11-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATC04_08245 9209d452643734b27a3c60646e4a7940 506 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 21 505 4.1E-194 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATC04_08245 9209d452643734b27a3c60646e4a7940 506 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 23 206 3.8E-60 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATC04_08245 9209d452643734b27a3c60646e4a7940 506 SUPERFAMILY SSF55347 196 504 9.16E-113 T 11-10-2018 ATC04_08245 9209d452643734b27a3c60646e4a7940 506 Gene3D G3DSA:3.30.360.10 195 505 2.6E-120 T 11-10-2018 ATC04_08245 9209d452643734b27a3c60646e4a7940 506 PIRSF PIRSF000110 9 506 6.6E-172 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATC04_08245 9209d452643734b27a3c60646e4a7940 506 Gene3D G3DSA:3.40.50.720 18 194 3.0E-51 T 11-10-2018 ATC04_08245 9209d452643734b27a3c60646e4a7940 506 SUPERFAMILY SSF51735 10 209 2.64E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_08245 9209d452643734b27a3c60646e4a7940 506 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 208 504 5.8E-111 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATC04_08935 5c54511bae361df116a45c2c9a79c81f 361 TIGRFAM TIGR03451 mycoS_dep_FDH: S-(hydroxymethyl)mycothiol dehydrogenase 5 360 6.8E-199 T 11-10-2018 IPR017816 S-(hydroxymethyl)mycothiol dehydrogenase MetaCyc: PWY-7908 ATC04_08935 5c54511bae361df116a45c2c9a79c81f 361 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 146 1.1E-24 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATC04_08935 5c54511bae361df116a45c2c9a79c81f 361 SMART SM00829 13 359 7.0E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATC04_08935 5c54511bae361df116a45c2c9a79c81f 361 SUPERFAMILY SSF51735 153 323 4.27E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_08935 5c54511bae361df116a45c2c9a79c81f 361 Gene3D G3DSA:3.40.50.720 167 304 6.5E-113 T 11-10-2018 ATC04_08935 5c54511bae361df116a45c2c9a79c81f 361 SUPERFAMILY SSF50129 3 186 2.43E-51 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_08935 5c54511bae361df116a45c2c9a79c81f 361 Gene3D G3DSA:3.90.180.10 11 358 6.5E-113 T 11-10-2018 ATC04_08935 5c54511bae361df116a45c2c9a79c81f 361 SUPERFAMILY SSF50129 310 359 4.66E-7 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_08935 5c54511bae361df116a45c2c9a79c81f 361 Pfam PF00107 Zinc-binding dehydrogenase 190 319 3.1E-30 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATC04_08230 bda3407a228a938bfe6cfb50e6d7c025 323 Gene3D G3DSA:3.40.50.720 8 316 7.1E-84 T 11-10-2018 ATC04_08230 bda3407a228a938bfe6cfb50e6d7c025 323 SUPERFAMILY SSF54373 188 277 3.14E-19 T 11-10-2018 ATC04_08230 bda3407a228a938bfe6cfb50e6d7c025 323 Gene3D G3DSA:3.30.9.10 84 276 7.1E-84 T 11-10-2018 ATC04_08230 bda3407a228a938bfe6cfb50e6d7c025 323 Pfam PF01266 FAD dependent oxidoreductase 8 316 6.7E-38 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATC04_08230 bda3407a228a938bfe6cfb50e6d7c025 323 PIRSF PIRSF000189 4 322 9.8E-67 T 11-10-2018 IPR023209 D-amino-acid oxidase GO:0003884|GO:0046416|GO:0071949 Reactome: R-HSA-389661|Reactome: R-HSA-9033241 ATC04_08230 bda3407a228a938bfe6cfb50e6d7c025 323 SUPERFAMILY SSF51971 5 318 3.53E-27 T 11-10-2018 ATC04_10845 6d0a03ac40567e5eb0cd3155a46ed926 294 SUPERFAMILY SSF53448 1 242 1.18E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_10845 6d0a03ac40567e5eb0cd3155a46ed926 294 Gene3D G3DSA:3.90.550.10 1 220 2.6E-23 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_10845 6d0a03ac40567e5eb0cd3155a46ed926 294 Pfam PF00535 Glycosyl transferase family 2 1 142 6.0E-8 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATC04_13030 98211d681962b6cfa2c0602a6c91e158 261 Gene3D G3DSA:3.40.50.150 24 257 2.5E-38 T 11-10-2018 ATC04_13030 98211d681962b6cfa2c0602a6c91e158 261 SUPERFAMILY SSF53335 23 166 1.82E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_13030 98211d681962b6cfa2c0602a6c91e158 261 Pfam PF08241 Methyltransferase domain 57 145 4.6E-17 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ATC04_14325 7cbeb469ca39f8ed2115bb1f91b2ef95 164 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 87 160 1.7E-12 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ATC04_14325 7cbeb469ca39f8ed2115bb1f91b2ef95 164 Gene3D G3DSA:1.10.287.180 9 80 2.9E-23 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ATC04_14325 7cbeb469ca39f8ed2115bb1f91b2ef95 164 PIRSF PIRSF006092 4 161 6.2E-30 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 ATC04_14325 7cbeb469ca39f8ed2115bb1f91b2ef95 164 SUPERFAMILY SSF46557 10 82 3.79E-22 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ATC04_14325 7cbeb469ca39f8ed2115bb1f91b2ef95 164 Hamap MF_00105 Transcription elongation factor GreA [greA]. 8 160 25.691 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 ATC04_14325 7cbeb469ca39f8ed2115bb1f91b2ef95 164 Pfam PF03449 Transcription elongation factor, N-terminal 10 80 1.5E-25 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ATC04_14325 7cbeb469ca39f8ed2115bb1f91b2ef95 164 SUPERFAMILY SSF54534 86 159 1.83E-10 T 11-10-2018 ATC04_14325 7cbeb469ca39f8ed2115bb1f91b2ef95 164 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 23 54 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ATC04_14325 7cbeb469ca39f8ed2115bb1f91b2ef95 164 Gene3D G3DSA:3.10.50.30 86 163 2.0E-6 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 ATC04_08895 e3cda921dfb4b0543203dd271d2b28ed 191 SUPERFAMILY SSF47413 5 75 1.75E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_08895 e3cda921dfb4b0543203dd271d2b28ed 191 Gene3D G3DSA:1.10.260.40 1 76 8.3E-19 T 11-10-2018 ATC04_08895 e3cda921dfb4b0543203dd271d2b28ed 191 Pfam PF07883 Cupin domain 120 175 2.1E-8 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ATC04_08895 e3cda921dfb4b0543203dd271d2b28ed 191 Gene3D G3DSA:2.60.120.10 89 189 3.3E-10 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_08895 e3cda921dfb4b0543203dd271d2b28ed 191 SUPERFAMILY SSF51182 69 176 5.3E-17 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ATC04_08895 e3cda921dfb4b0543203dd271d2b28ed 191 Pfam PF01381 Helix-turn-helix 15 69 8.2E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_08895 e3cda921dfb4b0543203dd271d2b28ed 191 SMART SM00530 14 69 3.4E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_06595 b46ae98316d308253cf134746418aa9f 315 Pfam PF00849 RNA pseudouridylate synthase 106 252 2.5E-28 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_06595 b46ae98316d308253cf134746418aa9f 315 SUPERFAMILY SSF55174 25 75 5.59E-6 T 11-10-2018 ATC04_06595 b46ae98316d308253cf134746418aa9f 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 21 311 2.4E-64 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_06595 b46ae98316d308253cf134746418aa9f 315 Gene3D G3DSA:3.10.290.10 13 77 3.5E-13 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ATC04_06595 b46ae98316d308253cf134746418aa9f 315 SMART SM00363 25 84 8.7E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06595 b46ae98316d308253cf134746418aa9f 315 Pfam PF01479 S4 domain 25 71 8.5E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06595 b46ae98316d308253cf134746418aa9f 315 SUPERFAMILY SSF55120 97 311 6.4E-55 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_06595 b46ae98316d308253cf134746418aa9f 315 Gene3D G3DSA:3.30.2350.10 97 314 1.8E-64 T 11-10-2018 ATC04_03210 60d47eaa0152d3ac494033c92d7fa2e2 119 Gene3D G3DSA:3.10.450.50 5 114 1.9E-6 T 11-10-2018 ATC04_03210 60d47eaa0152d3ac494033c92d7fa2e2 119 SUPERFAMILY SSF54427 9 114 2.41E-8 T 11-10-2018 IPR032710 NTF2-like domain superfamily ATC04_03210 60d47eaa0152d3ac494033c92d7fa2e2 119 Pfam PF14534 Domain of unknown function (DUF4440) 14 102 2.6E-7 T 11-10-2018 IPR027843 Domain of unknown function DUF4440 ATC04_10740 fb10383b07930ce95125e917856b8ae6 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 4.9E-60 T 11-10-2018 IPR016040 NAD(P)-binding domain ATC04_10740 fb10383b07930ce95125e917856b8ae6 355 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 5.4E-5 T 11-10-2018 ATC04_10740 fb10383b07930ce95125e917856b8ae6 355 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 5.4E-5 T 11-10-2018 ATC04_10740 fb10383b07930ce95125e917856b8ae6 355 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 5.4E-5 T 11-10-2018 ATC04_10740 fb10383b07930ce95125e917856b8ae6 355 SUPERFAMILY SSF51735 1 332 5.72E-92 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_10740 fb10383b07930ce95125e917856b8ae6 355 Gene3D G3DSA:3.40.50.720 3 273 1.4E-138 T 11-10-2018 ATC04_10740 fb10383b07930ce95125e917856b8ae6 355 Gene3D G3DSA:3.90.25.10 193 328 1.4E-138 T 11-10-2018 ATC04_10740 fb10383b07930ce95125e917856b8ae6 355 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 333 2.1E-132 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 ATC04_07900 a59f593bfb7e812342e1281e33439f95 133 Gene3D G3DSA:3.10.20.400 14 111 3.3E-37 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 ATC04_07900 a59f593bfb7e812342e1281e33439f95 133 SUPERFAMILY SSF141734 20 122 2.88E-45 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 ATC04_07900 a59f593bfb7e812342e1281e33439f95 133 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 47 120 2.2E-32 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ATC04_07900 a59f593bfb7e812342e1281e33439f95 133 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 70 119 2.0E-12 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ATC04_07900 a59f593bfb7e812342e1281e33439f95 133 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 21 124 29.838 T 11-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ATC04_05940 49f791fdff67d1373744bc7c0b74ab18 109 Gene3D G3DSA:3.40.630.30 18 108 7.0E-24 T 11-10-2018 ATC04_05940 49f791fdff67d1373744bc7c0b74ab18 109 Pfam PF14542 GCN5-related N-acetyl-transferase 28 103 6.2E-24 T 11-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase ATC04_05940 49f791fdff67d1373744bc7c0b74ab18 109 SUPERFAMILY SSF55729 21 106 4.43E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_01450 f06248b94f0bb5a88a8761aabb1536db 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 139 231 4.0E-23 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_01450 f06248b94f0bb5a88a8761aabb1536db 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 134 1.2E-21 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_01450 f06248b94f0bb5a88a8761aabb1536db 398 SUPERFAMILY SSF56645 10 256 7.98E-67 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_01450 f06248b94f0bb5a88a8761aabb1536db 398 Gene3D G3DSA:1.20.140.10 250 397 5.5E-30 T 11-10-2018 ATC04_01450 f06248b94f0bb5a88a8761aabb1536db 398 Gene3D G3DSA:2.40.110.10 139 249 9.2E-35 T 11-10-2018 ATC04_01450 f06248b94f0bb5a88a8761aabb1536db 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 245 390 1.1E-22 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_01450 f06248b94f0bb5a88a8761aabb1536db 398 SUPERFAMILY SSF47203 245 392 1.92E-18 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_01450 f06248b94f0bb5a88a8761aabb1536db 398 Gene3D G3DSA:1.10.540.10 10 133 4.2E-29 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_04065 610fbe2a1ef20a6378741a004f031734 262 Gene3D G3DSA:3.30.420.40 119 262 2.9E-33 T 11-10-2018 ATC04_04065 610fbe2a1ef20a6378741a004f031734 262 Gene3D G3DSA:3.30.420.40 3 118 6.9E-22 T 11-10-2018 ATC04_04065 610fbe2a1ef20a6378741a004f031734 262 Pfam PF00480 ROK family 11 176 5.4E-14 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ATC04_04065 610fbe2a1ef20a6378741a004f031734 262 SUPERFAMILY SSF53067 10 261 3.29E-30 T 11-10-2018 ATC04_18340 8472e85b6c24dde1c840d5507ea5f59f 146 SUPERFAMILY SSF54427 13 138 3.51E-22 T 11-10-2018 IPR032710 NTF2-like domain superfamily ATC04_18340 8472e85b6c24dde1c840d5507ea5f59f 146 Gene3D G3DSA:3.10.450.50 11 143 1.7E-26 T 11-10-2018 ATC04_18340 8472e85b6c24dde1c840d5507ea5f59f 146 Pfam PF07366 SnoaL-like polyketide cyclase 15 136 5.8E-16 T 11-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 ATC04_17860 25bc8828be12961a58e84cb5c201cb42 465 Gene3D G3DSA:3.60.15.10 1 258 5.3E-73 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_17860 25bc8828be12961a58e84cb5c201cb42 465 SMART SM00849 12 192 5.1E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_17860 25bc8828be12961a58e84cb5c201cb42 465 SMART SM00450 369 462 1.3E-8 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_17860 25bc8828be12961a58e84cb5c201cb42 465 Pfam PF00581 Rhodanese-like domain 383 457 6.9E-7 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_17860 25bc8828be12961a58e84cb5c201cb42 465 Pfam PF00753 Metallo-beta-lactamase superfamily 12 192 1.1E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_17860 25bc8828be12961a58e84cb5c201cb42 465 SUPERFAMILY SSF52821 235 357 2.75E-11 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_17860 25bc8828be12961a58e84cb5c201cb42 465 SUPERFAMILY SSF52821 369 458 2.1E-20 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_17860 25bc8828be12961a58e84cb5c201cb42 465 Gene3D G3DSA:3.40.250.10 373 463 9.2E-17 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_17860 25bc8828be12961a58e84cb5c201cb42 465 Gene3D G3DSA:3.40.250.10 266 361 4.6E-10 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_17860 25bc8828be12961a58e84cb5c201cb42 465 SUPERFAMILY SSF56281 7 259 1.37E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_16325 6bb98119d9e8210d6f561fae148a6142 223 Pfam PF01738 Dienelactone hydrolase family 97 197 8.0E-6 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 ATC04_16325 6bb98119d9e8210d6f561fae148a6142 223 SUPERFAMILY SSF53474 5 219 1.11E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_16325 6bb98119d9e8210d6f561fae148a6142 223 Gene3D G3DSA:3.40.50.1820 2 219 4.5E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_03860 01d6a05b460f3989743536a9eba985f5 227 Gene3D G3DSA:1.10.10.10 3 75 3.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03860 01d6a05b460f3989743536a9eba985f5 227 SUPERFAMILY SSF50037 152 221 7.55E-5 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal ATC04_03860 01d6a05b460f3989743536a9eba985f5 227 SMART SM00529 29 128 2.9E-32 T 11-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 ATC04_03860 01d6a05b460f3989743536a9eba985f5 227 Pfam PF04023 FeoA domain 148 222 3.9E-10 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ATC04_03860 01d6a05b460f3989743536a9eba985f5 227 SUPERFAMILY SSF46785 6 67 1.25E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03860 01d6a05b460f3989743536a9eba985f5 227 Gene3D G3DSA:1.10.60.10 78 143 2.5E-29 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 ATC04_03860 01d6a05b460f3989743536a9eba985f5 227 SUPERFAMILY SSF47979 68 140 5.62E-27 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 ATC04_03860 01d6a05b460f3989743536a9eba985f5 227 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 6 65 1.5E-12 T 11-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 ATC04_03860 01d6a05b460f3989743536a9eba985f5 227 SMART SM00899 148 223 5.4E-7 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ATC04_03860 01d6a05b460f3989743536a9eba985f5 227 Gene3D G3DSA:2.30.30.90 147 222 1.1E-5 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain ATC04_03860 01d6a05b460f3989743536a9eba985f5 227 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 68 136 1.1E-30 T 11-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 ATC04_02115 2f2c8f2f3f14689fa4e6c77d95c3924f 222 Pfam PF01966 HD domain 55 162 1.7E-11 T 11-10-2018 IPR006674 HD domain ATC04_02115 2f2c8f2f3f14689fa4e6c77d95c3924f 222 Gene3D G3DSA:1.10.3210.10 41 203 1.9E-19 T 11-10-2018 ATC04_02115 2f2c8f2f3f14689fa4e6c77d95c3924f 222 SUPERFAMILY SSF109604 32 171 6.54E-19 T 11-10-2018 ATC04_16545 0d48abc5078eee3c5da1073329740fcc 220 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 94 4.4E-16 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ATC04_16545 0d48abc5078eee3c5da1073329740fcc 220 Gene3D G3DSA:3.40.50.720 1 199 4.3E-49 T 11-10-2018 ATC04_16545 0d48abc5078eee3c5da1073329740fcc 220 SUPERFAMILY SSF51735 5 196 5.54E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_06675 38044782ac4918cc2a5c52e0323788be 308 SUPERFAMILY SSF51735 22 280 3.51E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_06675 38044782ac4918cc2a5c52e0323788be 308 Pfam PF13460 NAD(P)H-binding 27 213 5.4E-12 T 11-10-2018 IPR016040 NAD(P)-binding domain ATC04_06675 38044782ac4918cc2a5c52e0323788be 308 Gene3D G3DSA:3.40.50.720 23 302 2.0E-32 T 11-10-2018 ATC04_15395 6498b9d986d1b10efc0ba63b61c8e53c 353 Pfam PF00005 ABC transporter 22 163 1.4E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_15395 6498b9d986d1b10efc0ba63b61c8e53c 353 SMART SM00382 30 213 3.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_15395 6498b9d986d1b10efc0ba63b61c8e53c 353 Gene3D G3DSA:3.40.50.300 4 223 1.8E-62 T 11-10-2018 ATC04_15395 6498b9d986d1b10efc0ba63b61c8e53c 353 Gene3D G3DSA:2.40.50.140 278 336 3.5E-27 T 11-10-2018 ATC04_15395 6498b9d986d1b10efc0ba63b61c8e53c 353 SUPERFAMILY SSF52540 5 245 1.58E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15395 6498b9d986d1b10efc0ba63b61c8e53c 353 Gene3D G3DSA:2.40.50.940 224 345 3.5E-27 T 11-10-2018 ATC04_15395 6498b9d986d1b10efc0ba63b61c8e53c 353 Pfam PF08402 TOBE domain 271 344 1.9E-7 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 ATC04_15395 6498b9d986d1b10efc0ba63b61c8e53c 353 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_15395 6498b9d986d1b10efc0ba63b61c8e53c 353 SUPERFAMILY SSF50331 238 352 1.17E-23 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 298 1.6E-43 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 9.9E-24 T 11-10-2018 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 256 9.9E-24 T 11-10-2018 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 9.9E-24 T 11-10-2018 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 9.9E-24 T 11-10-2018 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 9.9E-24 T 11-10-2018 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 298 2.2E-10 T 11-10-2018 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 179 2.2E-10 T 11-10-2018 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 2.2E-10 T 11-10-2018 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 241 255 2.2E-10 T 11-10-2018 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 693 709 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 SUPERFAMILY SSF51905 5 197 1.83E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 Gene3D G3DSA:3.50.50.60 117 247 7.5E-69 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 Pfam PF04324 BFD-like [2Fe-2S] binding domain 431 485 1.6E-8 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 Pfam PF04324 BFD-like [2Fe-2S] binding domain 503 547 6.5E-7 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 646 775 1.7E-20 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 SUPERFAMILY SSF56014 647 822 1.57E-47 T 11-10-2018 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 Gene3D G3DSA:1.10.10.1100 431 491 3.9E-7 T 11-10-2018 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 Gene3D G3DSA:3.30.413.10 645 810 2.4E-35 T 11-10-2018 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 10 815 1.4E-260 T 11-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 SUPERFAMILY SSF55124 522 655 1.36E-22 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 Gene3D G3DSA:3.50.50.60 11 323 7.5E-69 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 SUPERFAMILY SSF51905 155 324 4.79E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 PRINTS PR00397 Sirohaem Fe-binding site signature 693 711 2.5E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 PRINTS PR00397 Sirohaem Fe-binding site signature 650 668 2.5E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 PIRSF PIRSF037149 1 849 1.6E-303 T 11-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 ATC04_03185 e07e569fc457181bebe84d7afdba79b3 860 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 574 635 8.7E-11 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATC04_08515 dd0c647d56e80b015f6fc3a2ca9623d7 307 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 16 307 9.3E-125 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ATC04_08515 dd0c647d56e80b015f6fc3a2ca9623d7 307 PIRSF PIRSF002936 8 307 4.3E-125 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ATC04_08515 dd0c647d56e80b015f6fc3a2ca9623d7 307 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 39 261 2.3E-43 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 ATC04_08515 dd0c647d56e80b015f6fc3a2ca9623d7 307 SUPERFAMILY SSF52402 16 215 9.92E-62 T 11-10-2018 ATC04_08515 dd0c647d56e80b015f6fc3a2ca9623d7 307 Gene3D G3DSA:3.40.50.620 14 217 2.3E-57 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_02970 af1913c7dd31d98f89e693be8aa5c9f9 325 SUPERFAMILY SSF56317 24 308 9.68E-65 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ATC04_02970 af1913c7dd31d98f89e693be8aa5c9f9 325 Pfam PF00795 Carbon-nitrogen hydrolase 25 290 4.0E-41 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ATC04_02970 af1913c7dd31d98f89e693be8aa5c9f9 325 Gene3D G3DSA:3.60.110.10 15 316 3.6E-70 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ATC04_00405 2fad43156905a6b9607ff51b8f771c7a 244 SUPERFAMILY SSF51735 6 243 4.69E-80 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_00405 2fad43156905a6b9607ff51b8f771c7a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.9E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00405 2fad43156905a6b9607ff51b8f771c7a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.9E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00405 2fad43156905a6b9607ff51b8f771c7a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.9E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00405 2fad43156905a6b9607ff51b8f771c7a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.2E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00405 2fad43156905a6b9607ff51b8f771c7a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 4.2E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00405 2fad43156905a6b9607ff51b8f771c7a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.2E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00405 2fad43156905a6b9607ff51b8f771c7a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.2E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00405 2fad43156905a6b9607ff51b8f771c7a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 4.2E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00405 2fad43156905a6b9607ff51b8f771c7a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.2E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_00405 2fad43156905a6b9607ff51b8f771c7a 244 Gene3D G3DSA:3.40.50.720 1 243 2.7E-80 T 11-10-2018 ATC04_00405 2fad43156905a6b9607ff51b8f771c7a 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 242 1.3E-70 T 11-10-2018 ATC04_00405 2fad43156905a6b9607ff51b8f771c7a 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_04995 04d5a88241743ed07f8f66fadd27a58c 394 Pfam PF03741 Integral membrane protein TerC family 69 271 1.5E-49 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 ATC04_04995 04d5a88241743ed07f8f66fadd27a58c 394 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 5 316 6.6E-111 T 11-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 ATC04_02165 612da588db662e749d692640d2f70ff2 226 SUPERFAMILY SSF109604 29 209 1.23E-21 T 11-10-2018 ATC04_02165 612da588db662e749d692640d2f70ff2 226 Gene3D G3DSA:1.10.3210.10 23 197 4.4E-22 T 11-10-2018 ATC04_02165 612da588db662e749d692640d2f70ff2 226 Pfam PF01966 HD domain 51 163 3.6E-9 T 11-10-2018 IPR006674 HD domain ATC04_04425 f2d87443cfaf4225fd5184534c8d633b 645 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_04425 f2d87443cfaf4225fd5184534c8d633b 645 Pfam PF04954 Siderophore-interacting protein 495 641 5.7E-40 T 11-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain ATC04_04425 f2d87443cfaf4225fd5184534c8d633b 645 SMART SM00382 28 217 6.3E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04425 f2d87443cfaf4225fd5184534c8d633b 645 Gene3D G3DSA:3.40.50.300 1 250 4.3E-69 T 11-10-2018 ATC04_04425 f2d87443cfaf4225fd5184534c8d633b 645 Gene3D G3DSA:2.40.30.10 316 479 9.2E-25 T 11-10-2018 ATC04_04425 f2d87443cfaf4225fd5184534c8d633b 645 Pfam PF00005 ABC transporter 20 167 7.2E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_04425 f2d87443cfaf4225fd5184534c8d633b 645 Pfam PF08021 Siderophore-interacting FAD-binding domain 333 478 1.8E-24 T 11-10-2018 IPR013113 FAD-binding 9, siderophore-interacting ATC04_04425 f2d87443cfaf4225fd5184534c8d633b 645 SUPERFAMILY SSF52540 4 231 1.81E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_04425 f2d87443cfaf4225fd5184534c8d633b 645 Gene3D G3DSA:3.40.50.80 491 645 6.2E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_04675 cc66498594bdbe0ac06fe157524a885b 319 SUPERFAMILY SSF53098 133 316 5.69E-32 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_04675 cc66498594bdbe0ac06fe157524a885b 319 Gene3D G3DSA:3.30.420.10 167 319 2.9E-23 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_04675 cc66498594bdbe0ac06fe157524a885b 319 Pfam PF00665 Integrase core domain 131 273 6.8E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_04675 cc66498594bdbe0ac06fe157524a885b 319 Pfam PF13011 leucine-zipper of insertion element IS481 1 82 6.2E-18 T 11-10-2018 IPR024967 DNA-binding domain, IS481-type ATC04_04675 cc66498594bdbe0ac06fe157524a885b 319 SUPERFAMILY SSF46689 21 111 1.79E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_08645 2ece0342b1f8d9114ff388833770d0bf 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 3 101 1.4E-23 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_08645 2ece0342b1f8d9114ff388833770d0bf 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 2 102 17.597 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_08645 2ece0342b1f8d9114ff388833770d0bf 102 SUPERFAMILY SSF141091 2 101 1.31E-28 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_08645 2ece0342b1f8d9114ff388833770d0bf 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 3 101 1.8E-29 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_03120 b7fe6c56542f5f529cab0c3eba61a100 236 Gene3D G3DSA:3.10.180.10 115 236 4.7E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_03120 b7fe6c56542f5f529cab0c3eba61a100 236 Gene3D G3DSA:3.10.180.10 1 107 2.9E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_03120 b7fe6c56542f5f529cab0c3eba61a100 236 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 127 229 2.6E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_03120 b7fe6c56542f5f529cab0c3eba61a100 236 SUPERFAMILY SSF54593 121 232 9.35E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_03120 b7fe6c56542f5f529cab0c3eba61a100 236 SUPERFAMILY SSF54593 1 149 6.05E-9 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_00955 ee31839ad58cade89c496a82baacfce7 333 Pfam PF02678 Pirin 40 138 5.3E-27 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 ATC04_00955 ee31839ad58cade89c496a82baacfce7 333 PIRSF PIRSF006232 18 303 9.0E-70 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 ATC04_00955 ee31839ad58cade89c496a82baacfce7 333 SUPERFAMILY SSF51182 37 292 7.53E-63 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ATC04_00955 ee31839ad58cade89c496a82baacfce7 333 Gene3D G3DSA:2.60.120.10 31 268 9.1E-57 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_00955 ee31839ad58cade89c496a82baacfce7 333 Pfam PF05726 Pirin C-terminal cupin domain 194 291 1.5E-17 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 ATC04_02305 29893db0d4e0a7ae4d97ef3bd327ea1f 324 Gene3D G3DSA:1.10.10.10 19 110 7.9E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_02305 29893db0d4e0a7ae4d97ef3bd327ea1f 324 SUPERFAMILY SSF46785 17 96 2.73E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_02305 29893db0d4e0a7ae4d97ef3bd327ea1f 324 Gene3D G3DSA:3.40.190.10 138 296 1.4E-14 T 11-10-2018 ATC04_02305 29893db0d4e0a7ae4d97ef3bd327ea1f 324 Gene3D G3DSA:3.40.190.10 178 284 1.4E-14 T 11-10-2018 ATC04_02305 29893db0d4e0a7ae4d97ef3bd327ea1f 324 Pfam PF03466 LysR substrate binding domain 110 308 2.2E-18 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_02305 29893db0d4e0a7ae4d97ef3bd327ea1f 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 3.3E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_02305 29893db0d4e0a7ae4d97ef3bd327ea1f 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 3.3E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_02305 29893db0d4e0a7ae4d97ef3bd327ea1f 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 3.3E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_02305 29893db0d4e0a7ae4d97ef3bd327ea1f 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 80 6.1E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_02305 29893db0d4e0a7ae4d97ef3bd327ea1f 324 SUPERFAMILY SSF53850 109 313 9.59E-20 T 11-10-2018 ATC04_15390 edde94bf6224e6e99a307529a2c9c313 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 38 237 2.0E-13 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ATC04_15390 edde94bf6224e6e99a307529a2c9c313 275 Pfam PF02358 Trehalose-phosphatase 41 250 5.9E-29 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 ATC04_15390 edde94bf6224e6e99a307529a2c9c313 275 Gene3D G3DSA:3.30.70.1020 125 201 1.1E-47 T 11-10-2018 ATC04_15390 edde94bf6224e6e99a307529a2c9c313 275 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 36 270 4.4E-28 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 ATC04_15390 edde94bf6224e6e99a307529a2c9c313 275 Gene3D G3DSA:3.40.50.1000 39 257 1.1E-47 T 11-10-2018 IPR023214 HAD superfamily ATC04_15390 edde94bf6224e6e99a307529a2c9c313 275 SUPERFAMILY SSF56784 38 271 4.75E-35 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_12480 5966ba50c47f3398b1f077e0dca9b40e 312 PIRSF PIRSF000728 16 301 6.2E-100 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATC04_12480 5966ba50c47f3398b1f077e0dca9b40e 312 Pfam PF00696 Amino acid kinase family 33 279 2.9E-46 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ATC04_12480 5966ba50c47f3398b1f077e0dca9b40e 312 Hamap MF_00082 Acetylglutamate kinase [argB]. 31 295 45.99 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATC04_12480 5966ba50c47f3398b1f077e0dca9b40e 312 PRINTS PR00474 Glutamate 5-kinase family signature 63 77 5.9E-9 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ATC04_12480 5966ba50c47f3398b1f077e0dca9b40e 312 PRINTS PR00474 Glutamate 5-kinase family signature 163 184 5.9E-9 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ATC04_12480 5966ba50c47f3398b1f077e0dca9b40e 312 PRINTS PR00474 Glutamate 5-kinase family signature 201 228 5.9E-9 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ATC04_12480 5966ba50c47f3398b1f077e0dca9b40e 312 PRINTS PR00474 Glutamate 5-kinase family signature 252 272 5.9E-9 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ATC04_12480 5966ba50c47f3398b1f077e0dca9b40e 312 TIGRFAM TIGR00761 argB: acetylglutamate kinase 33 277 2.5E-72 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATC04_12480 5966ba50c47f3398b1f077e0dca9b40e 312 SUPERFAMILY SSF53633 14 302 2.36E-82 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ATC04_12480 5966ba50c47f3398b1f077e0dca9b40e 312 Gene3D G3DSA:3.40.1160.10 11 307 3.7E-98 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ATC04_18040 8817707e2b213ddbdaaf7093748746ec 362 Pfam PF06250 Protein of unknown function (DUF1016) 17 321 1.1E-107 T 11-10-2018 IPR009362 Protein of unknown function DUF1016 ATC04_07005 2fcc777f1b8778092866171d88f478df 284 Gene3D G3DSA:3.90.79.20 11 142 3.0E-10 T 11-10-2018 ATC04_07005 2fcc777f1b8778092866171d88f478df 284 SUPERFAMILY SSF55811 97 275 4.2E-38 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_07005 2fcc777f1b8778092866171d88f478df 284 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 110 141 8.5E-7 T 11-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 ATC04_07005 2fcc777f1b8778092866171d88f478df 284 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 19 108 1.9E-4 T 11-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 ATC04_07005 2fcc777f1b8778092866171d88f478df 284 ProSitePatterns PS00893 Nudix box signature. 177 198 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATC04_07005 2fcc777f1b8778092866171d88f478df 284 Gene3D G3DSA:3.90.79.10 144 278 3.3E-34 T 11-10-2018 ATC04_07005 2fcc777f1b8778092866171d88f478df 284 Pfam PF00293 NUDIX domain 146 255 1.2E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_00175 50e5b75a2527bc4403cf1fed07a838fd 66 SUPERFAMILY SSF47413 4 62 8.31E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_00175 50e5b75a2527bc4403cf1fed07a838fd 66 Gene3D G3DSA:1.10.260.40 2 66 1.1E-15 T 11-10-2018 ATC04_00175 50e5b75a2527bc4403cf1fed07a838fd 66 SMART SM00530 10 65 3.0E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_00175 50e5b75a2527bc4403cf1fed07a838fd 66 Pfam PF01381 Helix-turn-helix 11 62 3.4E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_07290 a5c4dbe92c4b4abd18f0564a08f58a8c 391 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 349 7.6E-22 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ATC04_07290 a5c4dbe92c4b4abd18f0564a08f58a8c 391 Gene3D G3DSA:2.30.40.20 26 77 5.4E-54 T 11-10-2018 ATC04_07290 a5c4dbe92c4b4abd18f0564a08f58a8c 391 SUPERFAMILY SSF56672 6 238 9.78E-77 T 11-10-2018 ATC04_07290 a5c4dbe92c4b4abd18f0564a08f58a8c 391 Pfam PF00817 impB/mucB/samB family 12 157 2.0E-42 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ATC04_07290 a5c4dbe92c4b4abd18f0564a08f58a8c 391 Gene3D G3DSA:1.10.150.20 172 239 1.0E-19 T 11-10-2018 ATC04_07290 a5c4dbe92c4b4abd18f0564a08f58a8c 391 Gene3D G3DSA:3.30.1490.100 244 350 1.8E-25 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ATC04_07290 a5c4dbe92c4b4abd18f0564a08f58a8c 391 SUPERFAMILY SSF100879 242 341 2.75E-25 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ATC04_07290 a5c4dbe92c4b4abd18f0564a08f58a8c 391 Hamap MF_01113 DNA polymerase IV [dinB]. 6 355 34.836 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 ATC04_07290 a5c4dbe92c4b4abd18f0564a08f58a8c 391 Pfam PF11798 IMS family HHH motif 171 201 3.1E-9 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 ATC04_07290 a5c4dbe92c4b4abd18f0564a08f58a8c 391 Gene3D G3DSA:3.30.70.270 9 168 5.4E-54 T 11-10-2018 ATC04_13540 b316465f6f2c141147196d6e0dfe1c18 447 Gene3D G3DSA:3.40.640.10 2 297 2.0E-97 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_13540 b316465f6f2c141147196d6e0dfe1c18 447 SUPERFAMILY SSF53383 5 429 9.76E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_13540 b316465f6f2c141147196d6e0dfe1c18 447 PIRSF PIRSF001434 1 436 2.9E-126 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_13540 b316465f6f2c141147196d6e0dfe1c18 447 Gene3D G3DSA:3.90.1150.10 301 445 5.9E-49 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_13540 b316465f6f2c141147196d6e0dfe1c18 447 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_13540 b316465f6f2c141147196d6e0dfe1c18 447 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 7 432 3.9E-191 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 ATC04_13540 b316465f6f2c141147196d6e0dfe1c18 447 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 432 1.2E-132 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_11850 f155855044ce9cb1490c9d7bba3a7978 366 Gene3D G3DSA:3.40.50.1100 61 157 6.5E-116 T 11-10-2018 ATC04_11850 f155855044ce9cb1490c9d7bba3a7978 366 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 329 1.5E-69 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ATC04_11850 f155855044ce9cb1490c9d7bba3a7978 366 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ATC04_11850 f155855044ce9cb1490c9d7bba3a7978 366 TIGRFAM TIGR00260 thrC: threonine synthase 11 336 2.7E-88 T 11-10-2018 IPR004450 Threonine synthase-like ATC04_11850 f155855044ce9cb1490c9d7bba3a7978 366 PIRSF PIRSF038945 1 364 1.7E-155 T 11-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 ATC04_11850 f155855044ce9cb1490c9d7bba3a7978 366 SUPERFAMILY SSF53686 6 345 3.01E-104 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATC04_11850 f155855044ce9cb1490c9d7bba3a7978 366 Gene3D G3DSA:3.40.50.1100 12 335 6.5E-116 T 11-10-2018 ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Pfam PF05593 RHS Repeat 748 781 1.0E-4 T 11-10-2018 IPR031325 RHS repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Pfam PF05593 RHS Repeat 1016 1052 2.2E-10 T 11-10-2018 IPR031325 RHS repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Pfam PF05593 RHS Repeat 1167 1198 6.0E-7 T 11-10-2018 IPR031325 RHS repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Pfam PF05593 RHS Repeat 575 610 1.6E-5 T 11-10-2018 IPR031325 RHS repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Pfam PF05593 RHS Repeat 912 947 6.9E-10 T 11-10-2018 IPR031325 RHS repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Pfam PF05593 RHS Repeat 1058 1094 3.8E-7 T 11-10-2018 IPR031325 RHS repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Pfam PF05593 RHS Repeat 995 1030 6.0E-7 T 11-10-2018 IPR031325 RHS repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Pfam PF05593 RHS Repeat 703 738 2.5E-6 T 11-10-2018 IPR031325 RHS repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Pfam PF05593 RHS Repeat 1100 1134 5.5E-5 T 11-10-2018 IPR031325 RHS repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Pfam PF05593 RHS Repeat 1253 1288 1.5E-5 T 11-10-2018 IPR031325 RHS repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Pfam PF05593 RHS Repeat 786 822 3.4E-6 T 11-10-2018 IPR031325 RHS repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 SUPERFAMILY SSF69304 356 617 4.45E-6 T 11-10-2018 ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1016 1053 3.0E-9 T 11-10-2018 IPR006530 YD repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 470 504 5.6E-5 T 11-10-2018 IPR006530 YD repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1100 1136 8.6E-4 T 11-10-2018 IPR006530 YD repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1313 1351 8.2E-5 T 11-10-2018 IPR006530 YD repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 974 1014 5.4E-6 T 11-10-2018 IPR006530 YD repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 932 971 7.4E-10 T 11-10-2018 IPR006530 YD repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 703 743 3.2E-7 T 11-10-2018 IPR006530 YD repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 787 824 2.8E-4 T 11-10-2018 IPR006530 YD repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 575 605 8.9E-4 T 11-10-2018 IPR006530 YD repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 555 589 1.4E-4 T 11-10-2018 IPR006530 YD repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1058 1098 5.1E-8 T 11-10-2018 IPR006530 YD repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1148 1186 1.0E-5 T 11-10-2018 IPR006530 YD repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1272 1304 2.8E-6 T 11-10-2018 IPR006530 YD repeat ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Gene3D G3DSA:2.180.10.10 1464 1518 1.5E-8 T 11-10-2018 ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1467 1518 1.6E-10 T 11-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Gene3D G3DSA:3.90.930.1 876 1010 1.0E-10 T 11-10-2018 ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Gene3D G3DSA:3.90.930.1 611 744 5.5E-7 T 11-10-2018 ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Gene3D G3DSA:3.90.930.1 1011 1144 2.8E-12 T 11-10-2018 ATC04_16965 ca6cb1fc3fa050177823bdd67f71aa5f 1818 Gene3D G3DSA:3.90.930.1 1206 1342 4.4E-11 T 11-10-2018 ATC04_06005 f5842ba48e5027c1870dcbb8bdc8e34e 221 SUPERFAMILY SSF52172 8 141 1.85E-25 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_06005 f5842ba48e5027c1870dcbb8bdc8e34e 221 SMART SM00421 158 215 1.5E-25 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_06005 f5842ba48e5027c1870dcbb8bdc8e34e 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 175 202 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_06005 f5842ba48e5027c1870dcbb8bdc8e34e 221 Pfam PF00072 Response regulator receiver domain 11 123 4.2E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_06005 f5842ba48e5027c1870dcbb8bdc8e34e 221 SMART SM00448 9 123 2.1E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_06005 f5842ba48e5027c1870dcbb8bdc8e34e 221 Gene3D G3DSA:3.40.50.12740 10 221 2.9E-56 T 11-10-2018 ATC04_06005 f5842ba48e5027c1870dcbb8bdc8e34e 221 SUPERFAMILY SSF46894 153 220 2.04E-23 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_06005 f5842ba48e5027c1870dcbb8bdc8e34e 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 9.0E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_06005 f5842ba48e5027c1870dcbb8bdc8e34e 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 9.0E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_06005 f5842ba48e5027c1870dcbb8bdc8e34e 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 9.0E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_06005 f5842ba48e5027c1870dcbb8bdc8e34e 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 215 5.5E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_04000 74699017243cdde4d3eea10e8f92d192 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.1E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04000 74699017243cdde4d3eea10e8f92d192 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.1E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04000 74699017243cdde4d3eea10e8f92d192 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.1E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04000 74699017243cdde4d3eea10e8f92d192 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.9E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04000 74699017243cdde4d3eea10e8f92d192 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.9E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04000 74699017243cdde4d3eea10e8f92d192 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.9E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04000 74699017243cdde4d3eea10e8f92d192 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.9E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04000 74699017243cdde4d3eea10e8f92d192 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.9E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04000 74699017243cdde4d3eea10e8f92d192 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.9E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_04000 74699017243cdde4d3eea10e8f92d192 256 SUPERFAMILY SSF51735 5 254 7.28E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_04000 74699017243cdde4d3eea10e8f92d192 256 Gene3D G3DSA:3.40.50.720 1 256 5.7E-81 T 11-10-2018 ATC04_04000 74699017243cdde4d3eea10e8f92d192 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 191 0.0057 T 11-10-2018 ATC04_04000 74699017243cdde4d3eea10e8f92d192 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 253 4.8E-62 T 11-10-2018 ATC04_11305 09a9d59d5664fdbadadce582c16979e0 140 Pfam PF02050 Flagellar FliJ protein 20 132 5.6E-10 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 ATC04_07000 8e6ad1717bec56f725849bb4a429e124 442 Gene3D G3DSA:3.90.1200.10 102 297 1.3E-32 T 11-10-2018 ATC04_07000 8e6ad1717bec56f725849bb4a429e124 442 SUPERFAMILY SSF56112 36 253 4.59E-18 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ATC04_07000 8e6ad1717bec56f725849bb4a429e124 442 Pfam PF01636 Phosphotransferase enzyme family 36 256 4.8E-12 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ATC04_11435 9d4d2d275c20adf252266620a5e39b90 433 Gene3D G3DSA:3.40.50.10800 294 380 3.5E-79 T 11-10-2018 ATC04_11435 9d4d2d275c20adf252266620a5e39b90 433 Pfam PF02445 Quinolinate synthetase A protein 85 430 1.7E-105 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ATC04_11435 9d4d2d275c20adf252266620a5e39b90 433 Gene3D G3DSA:3.40.50.10800 168 429 3.5E-79 T 11-10-2018 ATC04_11435 9d4d2d275c20adf252266620a5e39b90 433 SUPERFAMILY SSF142754 90 430 1.06E-92 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ATC04_11435 9d4d2d275c20adf252266620a5e39b90 433 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 79 430 9.8E-91 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ATC04_11435 9d4d2d275c20adf252266620a5e39b90 433 Gene3D G3DSA:3.40.50.10800 95 412 3.5E-79 T 11-10-2018 ATC04_11435 9d4d2d275c20adf252266620a5e39b90 433 Hamap MF_00569 Quinolinate synthase A [nadA]. 78 431 52.402 T 11-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ATC04_03180 264080e24f8e578812877eb0dde5d50e 251 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 235 1.2E-75 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ATC04_03180 264080e24f8e578812877eb0dde5d50e 251 Gene3D G3DSA:3.40.1010.10 1 118 4.8E-38 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ATC04_03180 264080e24f8e578812877eb0dde5d50e 251 SUPERFAMILY SSF53790 2 237 1.19E-68 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ATC04_03180 264080e24f8e578812877eb0dde5d50e 251 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 83 116 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ATC04_03180 264080e24f8e578812877eb0dde5d50e 251 Gene3D G3DSA:3.30.950.10 119 248 2.2E-35 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 ATC04_03180 264080e24f8e578812877eb0dde5d50e 251 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 213 7.6E-46 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ATC04_02965 f6124f7ecc24d86227e872fc28514a86 202 SUPERFAMILY SSF48498 74 199 5.71E-25 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_02965 f6124f7ecc24d86227e872fc28514a86 202 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 69 197 4.0E-14 T 11-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 ATC04_02965 f6124f7ecc24d86227e872fc28514a86 202 Gene3D G3DSA:1.10.357.10 1 201 8.7E-62 T 11-10-2018 ATC04_02965 f6124f7ecc24d86227e872fc28514a86 202 SUPERFAMILY SSF46689 11 64 3.59E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_02965 f6124f7ecc24d86227e872fc28514a86 202 PRINTS PR00400 Tetracycline repressor protein signature 132 151 2.2E-6 T 11-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 ATC04_02965 f6124f7ecc24d86227e872fc28514a86 202 PRINTS PR00400 Tetracycline repressor protein signature 76 95 2.2E-6 T 11-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 ATC04_02965 f6124f7ecc24d86227e872fc28514a86 202 PRINTS PR00400 Tetracycline repressor protein signature 24 47 2.2E-6 T 11-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 ATC04_02965 f6124f7ecc24d86227e872fc28514a86 202 PRINTS PR00400 Tetracycline repressor protein signature 182 196 2.2E-6 T 11-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 ATC04_01145 db0835730aaeeaf058e4ef2bd21e2d6f 321 Gene3D G3DSA:3.30.420.40 8 311 2.8E-96 T 11-10-2018 ATC04_01145 db0835730aaeeaf058e4ef2bd21e2d6f 321 Pfam PF00480 ROK family 8 315 5.6E-73 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ATC04_01145 db0835730aaeeaf058e4ef2bd21e2d6f 321 Gene3D G3DSA:3.30.420.40 126 298 2.8E-96 T 11-10-2018 ATC04_01145 db0835730aaeeaf058e4ef2bd21e2d6f 321 SUPERFAMILY SSF53067 7 317 3.89E-65 T 11-10-2018 ATC04_11395 de97bafd9c4864dd404330a8e8798733 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.8E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_11395 de97bafd9c4864dd404330a8e8798733 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 1.8E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_11395 de97bafd9c4864dd404330a8e8798733 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.8E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_11395 de97bafd9c4864dd404330a8e8798733 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 1.8E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_11395 de97bafd9c4864dd404330a8e8798733 142 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 99 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site ATC04_11395 de97bafd9c4864dd404330a8e8798733 142 SMART SM00347 24 127 7.8E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_11395 de97bafd9c4864dd404330a8e8798733 142 Gene3D G3DSA:1.10.10.10 3 142 1.6E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_11395 de97bafd9c4864dd404330a8e8798733 142 SUPERFAMILY SSF46785 6 141 7.49E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_11395 de97bafd9c4864dd404330a8e8798733 142 Pfam PF12802 MarR family 31 90 9.1E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_16925 fc2e90247de262596f64dd34ad7b9edd 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 46 65 7.1E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_16925 fc2e90247de262596f64dd34ad7b9edd 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 46 7.1E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_16925 fc2e90247de262596f64dd34ad7b9edd 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 35 7.1E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_16925 fc2e90247de262596f64dd34ad7b9edd 161 SMART SM00344 19 128 6.3E-31 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATC04_16925 fc2e90247de262596f64dd34ad7b9edd 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 20 66 1.7E-12 T 11-10-2018 ATC04_16925 fc2e90247de262596f64dd34ad7b9edd 161 Gene3D G3DSA:3.30.70.920 71 161 3.5E-15 T 11-10-2018 ATC04_16925 fc2e90247de262596f64dd34ad7b9edd 161 SUPERFAMILY SSF46785 18 78 6.82E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_16925 fc2e90247de262596f64dd34ad7b9edd 161 Pfam PF01037 Lrp/AsnC ligand binding domain 87 158 2.0E-12 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATC04_16925 fc2e90247de262596f64dd34ad7b9edd 161 Gene3D G3DSA:1.10.10.10 10 70 6.5E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16925 fc2e90247de262596f64dd34ad7b9edd 161 SUPERFAMILY SSF54909 81 159 7.37E-10 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_00410 e3646870eeccd083ebb5d8a97e14a769 572 SUPERFAMILY SSF51905 1 562 2.12E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00410 e3646870eeccd083ebb5d8a97e14a769 572 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 440 9.5E-7 T 11-10-2018 ATC04_00410 e3646870eeccd083ebb5d8a97e14a769 572 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 9.5E-7 T 11-10-2018 ATC04_00410 e3646870eeccd083ebb5d8a97e14a769 572 Pfam PF00890 FAD binding domain 8 543 3.7E-79 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_00410 e3646870eeccd083ebb5d8a97e14a769 572 Gene3D G3DSA:3.90.700.10 346 493 1.3E-124 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_00410 e3646870eeccd083ebb5d8a97e14a769 572 Gene3D G3DSA:3.50.50.60 7 554 1.3E-124 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00410 e3646870eeccd083ebb5d8a97e14a769 572 SUPERFAMILY SSF56425 338 504 1.81E-33 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATC04_13815 c4ed02c2d64dde6b7375d18975dd89f6 265 Gene3D G3DSA:3.30.540.10 6 149 3.2E-32 T 11-10-2018 ATC04_13815 c4ed02c2d64dde6b7375d18975dd89f6 265 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 87 100 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site ATC04_13815 c4ed02c2d64dde6b7375d18975dd89f6 265 Gene3D G3DSA:3.40.190.80 159 261 7.9E-26 T 11-10-2018 ATC04_13815 c4ed02c2d64dde6b7375d18975dd89f6 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 1.5E-24 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_13815 c4ed02c2d64dde6b7375d18975dd89f6 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 191 212 1.5E-24 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_13815 c4ed02c2d64dde6b7375d18975dd89f6 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 1.5E-24 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_13815 c4ed02c2d64dde6b7375d18975dd89f6 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 222 246 1.5E-24 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_13815 c4ed02c2d64dde6b7375d18975dd89f6 265 SUPERFAMILY SSF56655 10 249 1.09E-56 T 11-10-2018 ATC04_13815 c4ed02c2d64dde6b7375d18975dd89f6 265 Pfam PF00459 Inositol monophosphatase family 13 241 1.3E-41 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ATC04_13240 4eefc0cb7875ab9c2fc3fb343ef31078 505 Gene3D G3DSA:1.10.3720.10 283 504 5.3E-11 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_13240 4eefc0cb7875ab9c2fc3fb343ef31078 505 SUPERFAMILY SSF161098 293 489 7.63E-11 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_13240 4eefc0cb7875ab9c2fc3fb343ef31078 505 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 300 504 1.7E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_08015 765183ab1c7c41ce86b821e8c49bea5e 546 Pfam PF02720 Domain of unknown function (DUF222) 222 462 6.8E-7 T 11-10-2018 IPR003870 Domain of unknown function DUF222 ATC04_07105 ab0b3d844b61861121c693ecf9236a25 299 Gene3D G3DSA:2.60.200.40 141 292 5.6E-25 T 11-10-2018 ATC04_07105 ab0b3d844b61861121c693ecf9236a25 299 Gene3D G3DSA:3.40.50.10330 1 134 9.7E-21 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ATC04_07105 ab0b3d844b61861121c693ecf9236a25 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 10 113 6.1E-20 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ATC04_07105 ab0b3d844b61861121c693ecf9236a25 299 SMART SM00046 9 132 0.0017 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ATC04_07105 ab0b3d844b61861121c693ecf9236a25 299 SUPERFAMILY SSF111331 8 299 2.35E-51 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ATC04_09670 5fbc3ead74b50641eab0273333a40e80 457 PIRSF PIRSF018077 1 456 2.1E-159 T 11-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 ATC04_09670 5fbc3ead74b50641eab0273333a40e80 457 Pfam PF03136 Pup-ligase protein 4 423 6.3E-151 T 11-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 ATC04_09670 5fbc3ead74b50641eab0273333a40e80 457 Hamap MF_02111 Pup--protein ligase [pafA]. 1 453 47.771 T 11-10-2018 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 MetaCyc: PWY-7893 ATC04_09670 5fbc3ead74b50641eab0273333a40e80 457 TIGRFAM TIGR03686 pupylate_PafA: Pup--protein ligase 3 453 6.9E-205 T 11-10-2018 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 MetaCyc: PWY-7893 ATC04_10005 d58c7656446ea0a409333c7b6a28e3e6 364 Pfam PF04607 Region found in RelA / SpoT proteins 57 200 3.7E-19 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 ATC04_10005 d58c7656446ea0a409333c7b6a28e3e6 364 Gene3D G3DSA:3.30.460.10 11 184 8.4E-17 T 11-10-2018 ATC04_10005 d58c7656446ea0a409333c7b6a28e3e6 364 SUPERFAMILY SSF81301 37 231 3.27E-27 T 11-10-2018 ATC04_10005 d58c7656446ea0a409333c7b6a28e3e6 364 SMART SM00954 57 203 9.6E-20 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 ATC04_04770 ed3d1b70d3732a8f77e6ff6ead1fe098 380 Pfam PF04261 Dyp-type peroxidase family 48 367 3.6E-60 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 ATC04_04770 ed3d1b70d3732a8f77e6ff6ead1fe098 380 SUPERFAMILY SSF54909 43 373 9.12E-66 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_04770 ed3d1b70d3732a8f77e6ff6ead1fe098 380 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 48 367 1.8E-53 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 ATC04_10990 938221c8caf62bcdcea7749302765a0c 509 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 47 509 5.2E-118 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase ATC04_10990 938221c8caf62bcdcea7749302765a0c 509 Pfam PF02397 Bacterial sugar transferase 316 503 9.1E-67 T 11-10-2018 IPR003362 Bacterial sugar transferase ATC04_00200 ac6d5b4f96dc4e5d6c1e7c5442f0ce82 288 Gene3D G3DSA:3.40.50.620 2 182 1.4E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_00200 ac6d5b4f96dc4e5d6c1e7c5442f0ce82 288 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 5 286 1.9E-74 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ATC04_00200 ac6d5b4f96dc4e5d6c1e7c5442f0ce82 288 Gene3D G3DSA:3.30.1300.10 183 288 2.9E-23 T 11-10-2018 ATC04_00200 ac6d5b4f96dc4e5d6c1e7c5442f0ce82 288 Hamap MF_00158 Pantothenate synthetase [panC]. 5 288 34.887 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ATC04_00200 ac6d5b4f96dc4e5d6c1e7c5442f0ce82 288 Pfam PF02569 Pantoate-beta-alanine ligase 5 285 1.6E-85 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ATC04_00200 ac6d5b4f96dc4e5d6c1e7c5442f0ce82 288 SUPERFAMILY SSF52374 4 288 7.04E-85 T 11-10-2018 ATC04_11580 0ec3f5a11e7de03ce4647438024b9aa1 1034 Pfam PF13476 AAA domain 5 214 2.5E-24 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain ATC04_11580 0ec3f5a11e7de03ce4647438024b9aa1 1034 SUPERFAMILY SSF52540 1 1023 8.89E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11580 0ec3f5a11e7de03ce4647438024b9aa1 1034 Gene3D G3DSA:3.40.50.300 1 253 1.2E-38 T 11-10-2018 ATC04_11580 0ec3f5a11e7de03ce4647438024b9aa1 1034 Gene3D G3DSA:3.40.50.300 741 1026 6.3E-27 T 11-10-2018 ATC04_11580 0ec3f5a11e7de03ce4647438024b9aa1 1034 Pfam PF13558 Putative exonuclease SbcCD, C subunit 922 987 4.6E-14 T 11-10-2018 ATC04_02415 50f5a312570f92088c2a54bac3767ee7 99 Pfam PF00571 CBS domain 38 83 1.8E-6 T 11-10-2018 IPR000644 CBS domain ATC04_02415 50f5a312570f92088c2a54bac3767ee7 99 SMART SM00116 38 85 6.7E-7 T 11-10-2018 IPR000644 CBS domain ATC04_02415 50f5a312570f92088c2a54bac3767ee7 99 SUPERFAMILY SSF54631 24 86 3.01E-11 T 11-10-2018 ATC04_02415 50f5a312570f92088c2a54bac3767ee7 99 Gene3D G3DSA:3.10.580.10 12 88 3.0E-14 T 11-10-2018 ATC04_16650 d98c957b941d11d27ab88c4943405ac4 287 SUPERFAMILY SSF51735 2 258 9.86E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_16650 d98c957b941d11d27ab88c4943405ac4 287 Pfam PF13460 NAD(P)H-binding 7 186 2.6E-18 T 11-10-2018 IPR016040 NAD(P)-binding domain ATC04_16650 d98c957b941d11d27ab88c4943405ac4 287 Gene3D G3DSA:3.90.25.10 139 271 2.2E-77 T 11-10-2018 ATC04_16650 d98c957b941d11d27ab88c4943405ac4 287 Gene3D G3DSA:3.40.50.720 4 270 2.2E-77 T 11-10-2018 ATC04_02485 97883d8bbba1af530ff2dd6f9ca0b374 249 SUPERFAMILY SSF52833 67 240 5.55E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_02485 97883d8bbba1af530ff2dd6f9ca0b374 249 Pfam PF13462 Thioredoxin 80 234 1.2E-23 T 11-10-2018 IPR012336 Thioredoxin-like fold ATC04_02485 97883d8bbba1af530ff2dd6f9ca0b374 249 Gene3D G3DSA:3.40.30.10 60 248 3.8E-50 T 11-10-2018 ATC04_10330 af4c90d1531a3cdf3d49c8a89f4dd03e 513 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 412 507 1.3E-21 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain ATC04_10330 af4c90d1531a3cdf3d49c8a89f4dd03e 513 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 9 494 1.6E-129 T 11-10-2018 IPR004482 Mg chelatase-related protein ATC04_10330 af4c90d1531a3cdf3d49c8a89f4dd03e 513 Gene3D G3DSA:3.40.50.300 197 512 2.9E-43 T 11-10-2018 ATC04_10330 af4c90d1531a3cdf3d49c8a89f4dd03e 513 Pfam PF01078 Magnesium chelatase, subunit ChlI 196 401 7.7E-77 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain ATC04_10330 af4c90d1531a3cdf3d49c8a89f4dd03e 513 SMART SM00382 216 401 2.5E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_10330 af4c90d1531a3cdf3d49c8a89f4dd03e 513 SUPERFAMILY SSF54211 7 163 3.26E-28 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_10330 af4c90d1531a3cdf3d49c8a89f4dd03e 513 Gene3D G3DSA:3.30.230.10 37 166 1.1E-6 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATC04_10330 af4c90d1531a3cdf3d49c8a89f4dd03e 513 SUPERFAMILY SSF52540 194 507 8.8E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10330 af4c90d1531a3cdf3d49c8a89f4dd03e 513 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 141 1.4E-30 T 11-10-2018 ATC04_06715 8f7ec9b5f442c4b39f7f2d1576205d7b 267 Gene3D G3DSA:3.40.50.1820 7 262 5.3E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_06715 8f7ec9b5f442c4b39f7f2d1576205d7b 267 Pfam PF12697 Alpha/beta hydrolase family 15 252 3.1E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_06715 8f7ec9b5f442c4b39f7f2d1576205d7b 267 SUPERFAMILY SSF53474 10 257 5.9E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_08720 3b7eb9c966a14e7f31f8763a0749cca3 204 SUPERFAMILY SSF55136 129 197 1.31E-7 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ATC04_08720 3b7eb9c966a14e7f31f8763a0749cca3 204 Gene3D G3DSA:3.20.80.10 1 199 4.9E-74 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ATC04_08720 3b7eb9c966a14e7f31f8763a0749cca3 204 PIRSF PIRSF031644 1 201 4.6E-61 T 11-10-2018 IPR008319 Uncharacterised conserved protein UCP031644 ATC04_08720 3b7eb9c966a14e7f31f8763a0749cca3 204 Pfam PF06445 GyrI-like small molecule binding domain 21 196 1.9E-21 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain ATC04_14365 db8554c3dd59e1ad895821c71c4ba8f1 165 Pfam PF00589 Phage integrase family 6 144 1.1E-19 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATC04_14365 db8554c3dd59e1ad895821c71c4ba8f1 165 Gene3D G3DSA:1.10.443.10 4 158 7.5E-34 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ATC04_14365 db8554c3dd59e1ad895821c71c4ba8f1 165 SUPERFAMILY SSF56349 6 149 8.83E-27 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATC04_09580 848e6a20f13c22bc2f1a014800fdfa97 171 Pfam PF01872 RibD C-terminal domain 4 169 2.1E-21 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ATC04_09580 848e6a20f13c22bc2f1a014800fdfa97 171 Gene3D G3DSA:3.40.430.10 3 171 6.1E-38 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_09580 848e6a20f13c22bc2f1a014800fdfa97 171 SUPERFAMILY SSF53597 2 171 5.5E-28 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_04160 aa9ad59e5e68846756fec44bdb660809 293 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_04160 aa9ad59e5e68846756fec44bdb660809 293 Pfam PF00005 ABC transporter 17 157 1.1E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_04160 aa9ad59e5e68846756fec44bdb660809 293 SUPERFAMILY SSF52540 1 219 2.39E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_04160 aa9ad59e5e68846756fec44bdb660809 293 Gene3D G3DSA:3.40.50.300 1 230 1.9E-63 T 11-10-2018 ATC04_04160 aa9ad59e5e68846756fec44bdb660809 293 SMART SM00382 26 206 1.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04160 aa9ad59e5e68846756fec44bdb660809 293 Pfam PF13732 Domain of unknown function (DUF4162) 214 291 1.7E-9 T 11-10-2018 IPR025302 Domain of unknown function DUF4162 ATC04_06515 f806118c9d3bf8bc7d92d13ee0b0b137 76 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 13 73 12.497 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ATC04_06515 f806118c9d3bf8bc7d92d13ee0b0b137 76 Pfam PF02609 Exonuclease VII small subunit 14 64 5.0E-16 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ATC04_06515 f806118c9d3bf8bc7d92d13ee0b0b137 76 Gene3D G3DSA:1.10.287.1040 8 76 1.2E-13 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 ATC04_06515 f806118c9d3bf8bc7d92d13ee0b0b137 76 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 13 53 5.0E-10 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ATC04_06515 f806118c9d3bf8bc7d92d13ee0b0b137 76 SUPERFAMILY SSF116842 7 69 1.2E-16 T 11-10-2018 ATC04_06515 f806118c9d3bf8bc7d92d13ee0b0b137 76 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 13 66 2.5E-19 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ATC04_06515 f806118c9d3bf8bc7d92d13ee0b0b137 76 PIRSF PIRSF006488 1 76 8.1E-22 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ATC04_04555 27cd7aa76bc525a610dea55d2d240266 640 Gene3D G3DSA:3.10.450.40 97 198 1.3E-24 T 11-10-2018 ATC04_04555 27cd7aa76bc525a610dea55d2d240266 640 SUPERFAMILY SSF49998 203 621 1.57E-145 T 11-10-2018 IPR036460 Copper amine oxidase, catalytic domain superfamily GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 ATC04_04555 27cd7aa76bc525a610dea55d2d240266 640 ProSitePatterns PS01164 Copper amine oxidase topaquinone signature. 366 379 - T 11-10-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 ATC04_04555 27cd7aa76bc525a610dea55d2d240266 640 Pfam PF01179 Copper amine oxidase, enzyme domain 215 619 6.0E-146 T 11-10-2018 IPR015798 Copper amine oxidase, catalytic domain GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 ATC04_04555 27cd7aa76bc525a610dea55d2d240266 640 Pfam PF02728 Copper amine oxidase, N3 domain 94 184 8.8E-17 T 11-10-2018 IPR015802 Copper amine oxidase, N3-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 KEGG: 00260+1.4.3.21|KEGG: 00350+1.4.3.21|KEGG: 00360+1.4.3.21|KEGG: 00410+1.4.3.21|KEGG: 00950+1.4.3.21|KEGG: 00960+1.4.3.21|MetaCyc: PWY-5751|Reactome: R-HSA-211945 ATC04_04555 27cd7aa76bc525a610dea55d2d240266 640 SUPERFAMILY SSF54416 94 202 3.92E-27 T 11-10-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 ATC04_04555 27cd7aa76bc525a610dea55d2d240266 640 Gene3D G3DSA:2.70.98.20 199 620 7.6E-163 T 11-10-2018 IPR036460 Copper amine oxidase, catalytic domain superfamily GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 ATC04_04555 27cd7aa76bc525a610dea55d2d240266 640 SUPERFAMILY SSF54416 9 89 6.28E-14 T 11-10-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 ATC04_04555 27cd7aa76bc525a610dea55d2d240266 640 Gene3D G3DSA:3.10.450.40 8 90 8.1E-6 T 11-10-2018 ATC04_04690 3d7b9b3e5d525fc246fdea87c622bfd1 409 Pfam PF13416 Bacterial extracellular solute-binding protein 94 364 2.2E-31 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ATC04_04690 3d7b9b3e5d525fc246fdea87c622bfd1 409 Gene3D G3DSA:3.40.190.10 73 376 3.2E-93 T 11-10-2018 ATC04_04690 3d7b9b3e5d525fc246fdea87c622bfd1 409 Gene3D G3DSA:3.40.190.10 187 400 3.2E-93 T 11-10-2018 ATC04_04690 3d7b9b3e5d525fc246fdea87c622bfd1 409 SUPERFAMILY SSF53850 69 395 2.38E-64 T 11-10-2018 ATC04_04690 3d7b9b3e5d525fc246fdea87c622bfd1 409 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 147 160 1.1E-8 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ATC04_04690 3d7b9b3e5d525fc246fdea87c622bfd1 409 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 261 280 1.1E-8 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ATC04_04690 3d7b9b3e5d525fc246fdea87c622bfd1 409 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 306 325 1.1E-8 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ATC04_04690 3d7b9b3e5d525fc246fdea87c622bfd1 409 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 217 1.1E-8 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ATC04_04690 3d7b9b3e5d525fc246fdea87c622bfd1 409 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 178 194 1.1E-8 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ATC04_16260 1fd9e14bcc4a32783086f3f70aa126a6 430 Pfam PF11798 IMS family HHH motif 173 203 1.5E-5 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 ATC04_16260 1fd9e14bcc4a32783086f3f70aa126a6 430 Pfam PF13438 Domain of unknown function (DUF4113) 381 428 4.0E-14 T 11-10-2018 IPR025188 Domain of unknown function DUF4113 ATC04_16260 1fd9e14bcc4a32783086f3f70aa126a6 430 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 359 1.1E-8 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ATC04_16260 1fd9e14bcc4a32783086f3f70aa126a6 430 Gene3D G3DSA:1.10.150.20 178 229 1.2E-8 T 11-10-2018 ATC04_16260 1fd9e14bcc4a32783086f3f70aa126a6 430 Gene3D G3DSA:3.30.70.270 8 158 1.5E-35 T 11-10-2018 ATC04_16260 1fd9e14bcc4a32783086f3f70aa126a6 430 Gene3D G3DSA:2.30.40.20 14 77 1.5E-35 T 11-10-2018 ATC04_16260 1fd9e14bcc4a32783086f3f70aa126a6 430 SUPERFAMILY SSF56672 6 238 1.25E-58 T 11-10-2018 ATC04_16260 1fd9e14bcc4a32783086f3f70aa126a6 430 Pfam PF00817 impB/mucB/samB family 9 152 2.6E-29 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ATC04_00635 fa287b3ba4f60d4e76230a83cef4b5ee 187 Pfam PF05258 Protein of unknown function (DUF721) 75 162 7.8E-24 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 ATC04_12535 df103fe292ed4e542e46e40a810fc092 201 Pfam PF13649 Methyltransferase domain 50 138 4.8E-10 T 11-10-2018 ATC04_12535 df103fe292ed4e542e46e40a810fc092 201 SUPERFAMILY SSF53335 30 199 1.61E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_12535 df103fe292ed4e542e46e40a810fc092 201 Gene3D G3DSA:3.40.50.150 14 192 3.8E-20 T 11-10-2018 ATC04_02640 f7e1eac7a4f97ea6ca8dba4c79d4dce5 303 Gene3D G3DSA:1.10.10.10 1 83 4.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_02640 f7e1eac7a4f97ea6ca8dba4c79d4dce5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 1.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_02640 f7e1eac7a4f97ea6ca8dba4c79d4dce5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 1.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_02640 f7e1eac7a4f97ea6ca8dba4c79d4dce5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 1.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_02640 f7e1eac7a4f97ea6ca8dba4c79d4dce5 303 SUPERFAMILY SSF53850 86 294 1.71E-31 T 11-10-2018 ATC04_02640 f7e1eac7a4f97ea6ca8dba4c79d4dce5 303 Gene3D G3DSA:3.40.190.290 89 293 6.1E-27 T 11-10-2018 ATC04_02640 f7e1eac7a4f97ea6ca8dba4c79d4dce5 303 Pfam PF03466 LysR substrate binding domain 86 288 1.4E-31 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_02640 f7e1eac7a4f97ea6ca8dba4c79d4dce5 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 7.0E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_02640 f7e1eac7a4f97ea6ca8dba4c79d4dce5 303 SUPERFAMILY SSF46785 2 86 1.5E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_00355 a10721214b2b0962db236e03401affb7 533 SUPERFAMILY SSF53738 198 305 1.88E-9 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_00355 a10721214b2b0962db236e03401affb7 533 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 200 304 4.5E-15 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_00355 a10721214b2b0962db236e03401affb7 533 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 310 429 9.1E-29 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_00355 a10721214b2b0962db236e03401affb7 533 Gene3D G3DSA:3.40.120.10 16 209 3.0E-62 T 11-10-2018 ATC04_00355 a10721214b2b0962db236e03401affb7 533 Gene3D G3DSA:3.40.120.10 210 307 5.4E-41 T 11-10-2018 ATC04_00355 a10721214b2b0962db236e03401affb7 533 SUPERFAMILY SSF53738 29 224 1.61E-43 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_00355 a10721214b2b0962db236e03401affb7 533 Gene3D G3DSA:3.30.310.50 433 533 4.3E-27 T 11-10-2018 ATC04_00355 a10721214b2b0962db236e03401affb7 533 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 137 146 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_00355 a10721214b2b0962db236e03401affb7 533 SUPERFAMILY SSF53738 295 436 1.29E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_00355 a10721214b2b0962db236e03401affb7 533 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 531 3.2E-242 T 11-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 ATC04_00355 a10721214b2b0962db236e03401affb7 533 Gene3D G3DSA:3.40.120.10 308 432 1.3E-31 T 11-10-2018 ATC04_00355 a10721214b2b0962db236e03401affb7 533 SUPERFAMILY SSF55957 425 532 3.14E-15 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_00355 a10721214b2b0962db236e03401affb7 533 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 176 6.7E-34 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_00355 a10721214b2b0962db236e03401affb7 533 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 480 523 3.2E-6 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATC04_14755 6e4d288a7c9cd1b6711b095d35f5b670 135 Pfam PF03860 Domain of Unknown Function (DUF326) 110 129 1.9E-5 T 11-10-2018 IPR005560 Protein of unknown function DUF326 ATC04_14755 6e4d288a7c9cd1b6711b095d35f5b670 135 Gene3D G3DSA:1.20.1270.360 20 132 3.8E-29 T 11-10-2018 ATC04_09620 15630bbb1e9b279586645c0fb9031383 115 Pfam PF13397 RNA polymerase-binding protein 4 108 1.1E-39 T 11-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 ATC04_09620 15630bbb1e9b279586645c0fb9031383 115 Gene3D G3DSA:2.20.28.270 1 81 4.2E-30 T 11-10-2018 IPR038638 RbpA superfamily ATC04_09620 15630bbb1e9b279586645c0fb9031383 115 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 16 113 21.272 T 11-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 ATC04_01060 4d49620270dffb860928163a6984026c 309 Pfam PF01263 Aldose 1-epimerase 10 300 5.3E-38 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 ATC04_01060 4d49620270dffb860928163a6984026c 309 SUPERFAMILY SSF74650 8 303 4.96E-53 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ATC04_01060 4d49620270dffb860928163a6984026c 309 Gene3D G3DSA:2.70.98.10 7 304 2.5E-68 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 ATC04_08460 f648e2eb39f3bce5c1c8e691f9d76057 219 SUPERFAMILY SSF52096 26 212 3.73E-63 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_08460 f648e2eb39f3bce5c1c8e691f9d76057 219 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 105 116 - T 11-10-2018 IPR018215 ClpP, Ser active site ATC04_08460 f648e2eb39f3bce5c1c8e691f9d76057 219 PRINTS PR00127 Clp protease catalytic subunit P signature 34 49 1.5E-44 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATC04_08460 f648e2eb39f3bce5c1c8e691f9d76057 219 PRINTS PR00127 Clp protease catalytic subunit P signature 105 122 1.5E-44 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATC04_08460 f648e2eb39f3bce5c1c8e691f9d76057 219 PRINTS PR00127 Clp protease catalytic subunit P signature 126 145 1.5E-44 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATC04_08460 f648e2eb39f3bce5c1c8e691f9d76057 219 PRINTS PR00127 Clp protease catalytic subunit P signature 74 94 1.5E-44 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATC04_08460 f648e2eb39f3bce5c1c8e691f9d76057 219 PRINTS PR00127 Clp protease catalytic subunit P signature 185 204 1.5E-44 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATC04_08460 f648e2eb39f3bce5c1c8e691f9d76057 219 Pfam PF00574 Clp protease 33 209 2.0E-73 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ATC04_08460 f648e2eb39f3bce5c1c8e691f9d76057 219 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 127 140 - T 11-10-2018 IPR033135 ClpP, histidine active site ATC04_08460 f648e2eb39f3bce5c1c8e691f9d76057 219 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 18 210 40.356 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATC04_08460 f648e2eb39f3bce5c1c8e691f9d76057 219 Gene3D G3DSA:3.90.226.10 7 216 3.4E-74 T 11-10-2018 ATC04_14750 319acdfdbf896c7c7e1a53bf9b282db0 88 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 2 81 3.3E-12 T 11-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal ATC04_01565 3232e45a12372683d24a1ceff88a953f 588 SUPERFAMILY SSF159941 405 581 1.44E-43 T 11-10-2018 IPR024047 MM3350-like superfamily ATC04_01565 3232e45a12372683d24a1ceff88a953f 588 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 406 577 1.9E-47 T 11-10-2018 IPR012912 Plasmid pRiA4b, Orf3 ATC04_01565 3232e45a12372683d24a1ceff88a953f 588 Gene3D G3DSA:3.10.290.30 401 582 8.8E-51 T 11-10-2018 IPR024047 MM3350-like superfamily ATC04_06480 dbad941c6a9d48ab3515c338631216e4 168 Gene3D G3DSA:3.30.70.920 65 157 1.4E-19 T 11-10-2018 ATC04_06480 dbad941c6a9d48ab3515c338631216e4 168 SMART SM00344 13 122 3.0E-31 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATC04_06480 dbad941c6a9d48ab3515c338631216e4 168 Pfam PF13404 AsnC-type helix-turn-helix domain 13 53 1.1E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_06480 dbad941c6a9d48ab3515c338631216e4 168 SUPERFAMILY SSF54909 75 156 3.89E-15 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_06480 dbad941c6a9d48ab3515c338631216e4 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 40 59 1.1E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_06480 dbad941c6a9d48ab3515c338631216e4 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 13 29 1.1E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_06480 dbad941c6a9d48ab3515c338631216e4 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 40 1.1E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_06480 dbad941c6a9d48ab3515c338631216e4 168 SUPERFAMILY SSF46785 13 72 2.0E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_06480 dbad941c6a9d48ab3515c338631216e4 168 Pfam PF01037 Lrp/AsnC ligand binding domain 79 151 2.0E-14 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATC04_06480 dbad941c6a9d48ab3515c338631216e4 168 Gene3D G3DSA:1.10.10.10 3 64 6.3E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_11515 5da5c0b49fc2193a5f50d682b908e69d 365 PIRSF PIRSF015921 19 353 2.3E-68 T 11-10-2018 IPR012171 Fatty acid desaturase GO:0006629|GO:0016021|GO:0016491 ATC04_11515 5da5c0b49fc2193a5f50d682b908e69d 365 Pfam PF00487 Fatty acid desaturase 66 328 8.7E-37 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 ATC04_00680 b472ae9dc2f776e88b5488ab614e60b9 285 SUPERFAMILY SSF52540 22 281 1.16E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_00680 b472ae9dc2f776e88b5488ab614e60b9 285 Pfam PF13614 AAA domain 24 206 2.0E-55 T 11-10-2018 IPR025669 AAA domain ATC04_00680 b472ae9dc2f776e88b5488ab614e60b9 285 Gene3D G3DSA:3.40.50.300 16 283 3.9E-75 T 11-10-2018 ATC04_13005 d0738b634d89247cafa82757e639c35a 339 Gene3D G3DSA:3.40.50.10740 8 166 6.4E-48 T 11-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal ATC04_13005 d0738b634d89247cafa82757e639c35a 339 SUPERFAMILY SSF141986 176 325 1.31E-31 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily ATC04_13005 d0738b634d89247cafa82757e639c35a 339 Gene3D G3DSA:3.50.30.60 167 328 2.0E-45 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily ATC04_13005 d0738b634d89247cafa82757e639c35a 339 Pfam PF02016 LD-carboxypeptidase 20 319 4.3E-65 T 11-10-2018 IPR003507 Peptidase family S66 ATC04_13005 d0738b634d89247cafa82757e639c35a 339 PIRSF PIRSF028757 8 334 1.1E-64 T 11-10-2018 IPR003507 Peptidase family S66 ATC04_13005 d0738b634d89247cafa82757e639c35a 339 SUPERFAMILY SSF52317 8 161 4.17E-37 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ATC04_07765 8f7dfce7eeb314bdab52558fc0c95601 167 Pfam PF04073 Aminoacyl-tRNA editing domain 40 154 4.8E-25 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ATC04_07765 8f7dfce7eeb314bdab52558fc0c95601 167 Gene3D G3DSA:3.90.960.10 2 166 2.6E-54 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ATC04_07765 8f7dfce7eeb314bdab52558fc0c95601 167 PIRSF PIRSF006181 5 167 7.5E-48 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ATC04_07765 8f7dfce7eeb314bdab52558fc0c95601 167 SUPERFAMILY SSF55826 10 164 1.23E-39 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ATC04_07765 8f7dfce7eeb314bdab52558fc0c95601 167 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 10 164 2.3E-48 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ATC04_03175 eed92ff8d84d44c9f5ddc91ec9c74b1e 366 Gene3D G3DSA:3.40.50.10090 13 262 7.6E-60 T 11-10-2018 ATC04_03175 eed92ff8d84d44c9f5ddc91ec9c74b1e 366 SMART SM00862 296 365 1.3E-13 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_03175 eed92ff8d84d44c9f5ddc91ec9c74b1e 366 SUPERFAMILY SSF46894 287 365 4.54E-13 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_03175 eed92ff8d84d44c9f5ddc91ec9c74b1e 366 SUPERFAMILY SSF69618 9 270 3.66E-47 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_03175 eed92ff8d84d44c9f5ddc91ec9c74b1e 366 Pfam PF02602 Uroporphyrinogen-III synthase HemD 22 263 5.5E-37 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATC04_03175 eed92ff8d84d44c9f5ddc91ec9c74b1e 366 Pfam PF00486 Transcriptional regulatory protein, C terminal 297 365 4.9E-11 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_03175 eed92ff8d84d44c9f5ddc91ec9c74b1e 366 Gene3D G3DSA:3.40.50.10090 40 171 7.6E-60 T 11-10-2018 ATC04_03175 eed92ff8d84d44c9f5ddc91ec9c74b1e 366 Gene3D G3DSA:1.10.10.10 275 366 4.1E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_05945 fdf65529dbd6eeb229d99f2ac1bd878a 322 SUPERFAMILY SSF53254 157 284 3.85E-16 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_05945 fdf65529dbd6eeb229d99f2ac1bd878a 322 Gene3D G3DSA:3.90.79.10 18 153 4.1E-35 T 11-10-2018 ATC04_05945 fdf65529dbd6eeb229d99f2ac1bd878a 322 SUPERFAMILY SSF55811 19 148 1.9E-28 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_05945 fdf65529dbd6eeb229d99f2ac1bd878a 322 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATC04_05945 fdf65529dbd6eeb229d99f2ac1bd878a 322 Pfam PF00293 NUDIX domain 21 132 4.0E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_05945 fdf65529dbd6eeb229d99f2ac1bd878a 322 PRINTS PR00502 NUDIX hydrolase family signature 47 61 7.1E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATC04_05945 fdf65529dbd6eeb229d99f2ac1bd878a 322 PRINTS PR00502 NUDIX hydrolase family signature 61 76 7.1E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATC04_05945 fdf65529dbd6eeb229d99f2ac1bd878a 322 SMART SM00855 156 270 4.0E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_05945 fdf65529dbd6eeb229d99f2ac1bd878a 322 Gene3D G3DSA:3.40.50.1240 157 322 3.1E-38 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_05945 fdf65529dbd6eeb229d99f2ac1bd878a 322 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 157 234 1.4E-10 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_14905 3ecf6b3352bd5a19a2e528687e8e63f4 250 SUPERFAMILY SSF46785 19 93 1.07E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_14905 3ecf6b3352bd5a19a2e528687e8e63f4 250 Gene3D G3DSA:1.10.10.10 24 150 1.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_14905 3ecf6b3352bd5a19a2e528687e8e63f4 250 SMART SM00345 28 89 4.3E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_14905 3ecf6b3352bd5a19a2e528687e8e63f4 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 83 1.4E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_14905 3ecf6b3352bd5a19a2e528687e8e63f4 250 SUPERFAMILY SSF48008 125 233 2.41E-5 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 SUPERFAMILY SSF101904 519 838 5.23E-99 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 SUPERFAMILY SSF56719 46 506 1.44E-164 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 Gene3D G3DSA:3.30.1360.40 256 352 7.9E-194 T 11-10-2018 ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 731 778 1.4E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 525 571 6.6E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 678 726 8.2E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 789 825 2.9E-4 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 575 620 1.6E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 630 675 3.8E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 Gene3D G3DSA:3.90.199.10 48 506 7.9E-194 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 48 490 7.5E-148 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 20 829 22.895 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 SMART SM00434 27 484 4.1E-262 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 Gene3D G3DSA:2.120.10.90 521 829 4.0E-117 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 Gene3D G3DSA:1.10.268.10 389 477 7.9E-194 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ATC04_00625 dbb91188bc7d28fb51675137f1e1354f 873 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 24 827 0.0 T 11-10-2018 ATC04_14910 252589e4e041703b52bc9b90e7b1da81 219 Gene3D G3DSA:3.30.450.20 1 160 2.2E-8 T 11-10-2018 ATC04_07935 c051836316de509153845d1283d934e4 339 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 19 285 16.124 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ATC04_07935 c051836316de509153845d1283d934e4 339 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 155 167 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ATC04_07935 c051836316de509153845d1283d934e4 339 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 20 283 3.4E-49 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ATC04_07935 c051836316de509153845d1283d934e4 339 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 25 280 1.8E-65 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ATC04_16420 d48a88ad4c54995f8dfc8b7d632d47ce 121 Gene3D G3DSA:3.10.180.10 2 120 1.1E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_16420 d48a88ad4c54995f8dfc8b7d632d47ce 121 SUPERFAMILY SSF54593 5 119 6.77E-12 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_12700 bcca680b980d04fa27aed23bdf7d813d 232 Gene3D G3DSA:1.10.3720.10 7 205 5.3E-23 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_12700 bcca680b980d04fa27aed23bdf7d813d 232 SUPERFAMILY SSF161098 11 196 2.62E-29 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_12700 bcca680b980d04fa27aed23bdf7d813d 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 207 1.6E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_04990 d2de56f626e02c199e6a97dde245479a 136 PIRSF PIRSF028777 5 133 5.9E-48 T 11-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 ATC04_04990 d2de56f626e02c199e6a97dde245479a 136 Pfam PF03733 Inner membrane component domain 8 58 1.0E-19 T 11-10-2018 IPR005185 Inner membrane component domain ATC04_04990 d2de56f626e02c199e6a97dde245479a 136 Pfam PF03733 Inner membrane component domain 72 122 1.4E-15 T 11-10-2018 IPR005185 Inner membrane component domain ATC04_18150 360ae11efbe12087178f81ccb8642a22 297 Pfam PF01610 Transposase 91 282 4.8E-46 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATC04_18150 360ae11efbe12087178f81ccb8642a22 297 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 27 71 3.8E-10 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATC04_12320 dff4aec1fa295ec8cc7b3303f8e2deae 249 Gene3D G3DSA:3.40.50.2300 11 166 3.1E-27 T 11-10-2018 ATC04_12320 dff4aec1fa295ec8cc7b3303f8e2deae 249 SMART SM00448 15 133 1.6E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_12320 dff4aec1fa295ec8cc7b3303f8e2deae 249 Gene3D G3DSA:1.10.10.10 175 239 2.7E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_12320 dff4aec1fa295ec8cc7b3303f8e2deae 249 Pfam PF00072 Response regulator receiver domain 17 132 1.4E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_12320 dff4aec1fa295ec8cc7b3303f8e2deae 249 SUPERFAMILY SSF46785 182 233 3.09E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_12320 dff4aec1fa295ec8cc7b3303f8e2deae 249 PIRSF PIRSF006171 13 245 4.3E-64 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 ATC04_12320 dff4aec1fa295ec8cc7b3303f8e2deae 249 Pfam PF08279 HTH domain 181 221 1.9E-6 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 ATC04_12320 dff4aec1fa295ec8cc7b3303f8e2deae 249 SUPERFAMILY SSF52172 13 145 5.27E-30 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_14630 05df7fec3f1df03fe25f0cee656ed9b7 401 Gene3D G3DSA:3.40.640.10 1 253 7.0E-86 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_14630 05df7fec3f1df03fe25f0cee656ed9b7 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 381 6.6E-127 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_14630 05df7fec3f1df03fe25f0cee656ed9b7 401 PIRSF PIRSF001434 1 385 2.6E-130 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATC04_14630 05df7fec3f1df03fe25f0cee656ed9b7 401 Gene3D G3DSA:3.90.1150.10 254 391 6.0E-46 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_14630 05df7fec3f1df03fe25f0cee656ed9b7 401 SUPERFAMILY SSF53383 5 382 1.93E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 Gene3D G3DSA:3.40.50.80 121 267 1.8E-27 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 14 385 8.3E-144 T 11-10-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 Pfam PF00970 Oxidoreductase FAD-binding domain 17 118 9.2E-8 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 PRINTS PR00406 Cytochrome B5 reductase signature 106 120 2.0E-5 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 PRINTS PR00406 Cytochrome B5 reductase signature 179 190 2.0E-5 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 PRINTS PR00406 Cytochrome B5 reductase signature 142 161 2.0E-5 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 307 376 6.0E-14 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 Pfam PF00175 Oxidoreductase NAD-binding domain 144 252 2.0E-14 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 SUPERFAMILY SSF63380 13 118 3.76E-19 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 333 341 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 SUPERFAMILY SSF52343 137 270 1.44E-28 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 Gene3D G3DSA:2.40.30.10 12 119 2.9E-20 T 11-10-2018 ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 SUPERFAMILY SSF54292 262 384 2.49E-25 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ATC04_05465 493794813eb02c1edce4e8856d68c71a 386 Gene3D G3DSA:3.10.20.30 284 386 1.2E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ATC04_16065 699add47611716cc76e5ae54faed809a 759 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 66 552 3.0E-149 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ATC04_16065 699add47611716cc76e5ae54faed809a 759 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 104 552 1.4E-135 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ATC04_07340 fd0087b8ad362d221e455f6a2d43f7f3 401 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 337 361 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_07340 fd0087b8ad362d221e455f6a2d43f7f3 401 Pfam PF01098 Cell cycle protein 24 380 1.3E-82 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_07340 fd0087b8ad362d221e455f6a2d43f7f3 401 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 378 1.4E-102 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_00465 c2822af7c7bf7aaed064c7fcbc09c2bf 221 SUPERFAMILY SSF53474 2 215 7.83E-27 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_00465 c2822af7c7bf7aaed064c7fcbc09c2bf 221 Gene3D G3DSA:3.40.50.1820 1 216 1.4E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_14495 a93afcd1d6e0bb748200e89b8b31ab73 336 Gene3D G3DSA:3.40.50.620 6 329 2.9E-130 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_14495 a93afcd1d6e0bb748200e89b8b31ab73 336 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 144 165 4.5E-25 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ATC04_14495 a93afcd1d6e0bb748200e89b8b31ab73 336 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 4.5E-25 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ATC04_14495 a93afcd1d6e0bb748200e89b8b31ab73 336 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 197 207 4.5E-25 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ATC04_14495 a93afcd1d6e0bb748200e89b8b31ab73 336 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 17 33 4.5E-25 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ATC04_14495 a93afcd1d6e0bb748200e89b8b31ab73 336 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 22 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_14495 a93afcd1d6e0bb748200e89b8b31ab73 336 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 8.9E-79 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_14495 a93afcd1d6e0bb748200e89b8b31ab73 336 Gene3D G3DSA:1.10.240.10 188 298 2.9E-130 T 11-10-2018 ATC04_14495 a93afcd1d6e0bb748200e89b8b31ab73 336 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 41.927 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 ATC04_14495 a93afcd1d6e0bb748200e89b8b31ab73 336 SUPERFAMILY SSF52374 5 330 1.43E-96 T 11-10-2018 ATC04_14495 a93afcd1d6e0bb748200e89b8b31ab73 336 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 4.3E-105 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ATC04_17240 5c6d0999e592c8745f8248197b08f964 448 SUPERFAMILY SSF51735 149 396 6.61E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_17240 5c6d0999e592c8745f8248197b08f964 448 Gene3D G3DSA:3.30.530.20 2 146 3.1E-44 T 11-10-2018 IPR023393 START-like domain superfamily ATC04_17240 5c6d0999e592c8745f8248197b08f964 448 SUPERFAMILY SSF55961 3 135 4.71E-10 T 11-10-2018 ATC04_17240 5c6d0999e592c8745f8248197b08f964 448 Gene3D G3DSA:3.40.50.720 149 433 6.4E-76 T 11-10-2018 ATC04_17240 5c6d0999e592c8745f8248197b08f964 448 Pfam PF01370 NAD dependent epimerase/dehydratase family 155 357 1.7E-11 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ATC04_17240 5c6d0999e592c8745f8248197b08f964 448 Pfam PF08338 Domain of unknown function (DUF1731) 395 443 3.6E-16 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 ATC04_17240 5c6d0999e592c8745f8248197b08f964 448 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 154 440 1.9E-85 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 ATC04_11615 e3f2da5a0f96684074aae83dcdf62be8 119 Gene3D G3DSA:1.10.10.10 5 118 3.0E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_11615 e3f2da5a0f96684074aae83dcdf62be8 119 SUPERFAMILY SSF46785 4 75 1.68E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_11615 e3f2da5a0f96684074aae83dcdf62be8 119 SMART SM00345 12 71 2.0E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_11615 e3f2da5a0f96684074aae83dcdf62be8 119 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.2E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_03130 1b8c9de248add05515279a886bb61115 276 Pfam PF02634 FdhD/NarQ family 28 273 9.7E-78 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ATC04_03130 1b8c9de248add05515279a886bb61115 276 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 3 274 32.885 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ATC04_03130 1b8c9de248add05515279a886bb61115 276 PIRSF PIRSF015626 1 276 6.1E-86 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ATC04_03130 1b8c9de248add05515279a886bb61115 276 Gene3D G3DSA:3.40.140.10 127 276 4.2E-53 T 11-10-2018 ATC04_03130 1b8c9de248add05515279a886bb61115 276 SUPERFAMILY SSF53927 6 274 3.31E-74 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ATC04_03130 1b8c9de248add05515279a886bb61115 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 23 274 4.7E-47 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ATC04_00920 9265d069dcefb8148ea5309b279dc8af 184 Gene3D G3DSA:2.60.120.10 98 184 7.6E-14 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_00920 9265d069dcefb8148ea5309b279dc8af 184 SMART SM00530 16 71 8.3E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_00920 9265d069dcefb8148ea5309b279dc8af 184 Gene3D G3DSA:1.10.260.40 2 78 1.6E-17 T 11-10-2018 ATC04_00920 9265d069dcefb8148ea5309b279dc8af 184 Pfam PF13560 Helix-turn-helix domain 14 67 1.2E-11 T 11-10-2018 ATC04_00920 9265d069dcefb8148ea5309b279dc8af 184 SUPERFAMILY SSF47413 10 73 1.39E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_00920 9265d069dcefb8148ea5309b279dc8af 184 SUPERFAMILY SSF51182 92 179 5.4E-14 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ATC04_18080 4fff2d5c9e0590afab5210f83df20cb5 476 PIRSF PIRSF006060 2 474 4.4E-58 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_18080 4fff2d5c9e0590afab5210f83df20cb5 476 Gene3D G3DSA:1.20.1740.10 17 465 4.2E-40 T 11-10-2018 ATC04_18080 4fff2d5c9e0590afab5210f83df20cb5 476 Pfam PF13520 Amino acid permease 25 430 3.7E-29 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_12310 9e5d37ce398e3ac71782fdbe94b7bb40 433 PRINTS PR00173 Glutamate-aspartate symporter signature 24 44 1.1E-21 T 11-10-2018 ATC04_12310 9e5d37ce398e3ac71782fdbe94b7bb40 433 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 1.1E-21 T 11-10-2018 ATC04_12310 9e5d37ce398e3ac71782fdbe94b7bb40 433 PRINTS PR00173 Glutamate-aspartate symporter signature 91 116 1.1E-21 T 11-10-2018 ATC04_12310 9e5d37ce398e3ac71782fdbe94b7bb40 433 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 1.1E-21 T 11-10-2018 ATC04_12310 9e5d37ce398e3ac71782fdbe94b7bb40 433 SUPERFAMILY SSF118215 26 404 1.96E-99 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ATC04_12310 9e5d37ce398e3ac71782fdbe94b7bb40 433 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 53 68 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site ATC04_12310 9e5d37ce398e3ac71782fdbe94b7bb40 433 Pfam PF00375 Sodium:dicarboxylate symporter family 26 404 6.4E-94 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATC04_12310 9e5d37ce398e3ac71782fdbe94b7bb40 433 Gene3D G3DSA:1.10.3860.10 15 420 2.3E-102 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ATC04_12975 1f413f5cfa4ce158522ef3731578892f 458 Gene3D G3DSA:3.10.290.30 1 189 1.5E-35 T 11-10-2018 IPR024047 MM3350-like superfamily ATC04_12975 1f413f5cfa4ce158522ef3731578892f 458 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 2 172 9.2E-32 T 11-10-2018 IPR012912 Plasmid pRiA4b, Orf3 ATC04_12975 1f413f5cfa4ce158522ef3731578892f 458 SUPERFAMILY SSF159941 2 166 1.83E-30 T 11-10-2018 IPR024047 MM3350-like superfamily ATC04_14595 199fb6d43a45b34d0f7e3c34cc1373ca 288 SUPERFAMILY SSF53223 4 123 6.81E-36 T 11-10-2018 ATC04_14595 199fb6d43a45b34d0f7e3c34cc1373ca 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 35 57 9.3E-51 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_14595 199fb6d43a45b34d0f7e3c34cc1373ca 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 160 180 9.3E-51 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_14595 199fb6d43a45b34d0f7e3c34cc1373ca 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 76 103 9.3E-51 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_14595 199fb6d43a45b34d0f7e3c34cc1373ca 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 259 277 9.3E-51 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_14595 199fb6d43a45b34d0f7e3c34cc1373ca 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 111 132 9.3E-51 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_14595 199fb6d43a45b34d0f7e3c34cc1373ca 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 209 238 9.3E-51 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_14595 199fb6d43a45b34d0f7e3c34cc1373ca 288 Gene3D G3DSA:3.40.50.10860 10 280 1.3E-99 T 11-10-2018 ATC04_14595 199fb6d43a45b34d0f7e3c34cc1373ca 288 SUPERFAMILY SSF51735 124 285 1.89E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_14595 199fb6d43a45b34d0f7e3c34cc1373ca 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 125 285 1.2E-53 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_14595 199fb6d43a45b34d0f7e3c34cc1373ca 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 5 286 33.942 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_14595 199fb6d43a45b34d0f7e3c34cc1373ca 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 7 122 3.8E-36 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ATC04_14595 199fb6d43a45b34d0f7e3c34cc1373ca 288 Gene3D G3DSA:3.40.50.720 8 262 1.3E-99 T 11-10-2018 ATC04_02320 2cf433813e17ddcaef58f573d22f3c57 457 Gene3D G3DSA:3.40.309.10 236 425 3.8E-151 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_02320 2cf433813e17ddcaef58f573d22f3c57 457 SUPERFAMILY SSF53720 3 454 3.01E-142 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_02320 2cf433813e17ddcaef58f573d22f3c57 457 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 257 268 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ATC04_02320 2cf433813e17ddcaef58f573d22f3c57 457 Pfam PF00171 Aldehyde dehydrogenase family 3 452 5.5E-140 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_02320 2cf433813e17ddcaef58f573d22f3c57 457 Gene3D G3DSA:3.40.605.10 3 452 3.8E-151 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_09595 1eab4f79dcace20ae983c89541752694 348 Pfam PF03969 AFG1-like ATPase 53 339 2.3E-44 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 ATC04_09595 1eab4f79dcace20ae983c89541752694 348 SUPERFAMILY SSF52540 49 162 1.03E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09595 1eab4f79dcace20ae983c89541752694 348 Gene3D G3DSA:3.40.50.300 43 198 5.7E-14 T 11-10-2018 ATC04_08325 3a3ce16b1fce9dda37ba9d1fbb9b5401 390 SUPERFAMILY SSF53901 4 257 3.33E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_08325 3a3ce16b1fce9dda37ba9d1fbb9b5401 390 ProSitePatterns PS00737 Thiolases signature 2. 329 345 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ATC04_08325 3a3ce16b1fce9dda37ba9d1fbb9b5401 390 Pfam PF02803 Thiolase, C-terminal domain 267 383 1.2E-23 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ATC04_08325 3a3ce16b1fce9dda37ba9d1fbb9b5401 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 383 1.8E-110 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_08325 3a3ce16b1fce9dda37ba9d1fbb9b5401 390 PIRSF PIRSF000429 1 386 4.5E-107 T 11-10-2018 IPR002155 Thiolase GO:0016747 ATC04_08325 3a3ce16b1fce9dda37ba9d1fbb9b5401 390 SUPERFAMILY SSF53901 263 383 1.68E-23 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_08325 3a3ce16b1fce9dda37ba9d1fbb9b5401 390 Gene3D G3DSA:3.40.47.10 5 265 2.0E-118 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_08325 3a3ce16b1fce9dda37ba9d1fbb9b5401 390 Pfam PF00108 Thiolase, N-terminal domain 5 251 7.4E-69 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ATC04_08325 3a3ce16b1fce9dda37ba9d1fbb9b5401 390 Gene3D G3DSA:3.40.47.10 124 381 2.0E-118 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ATC04_08285 ddd69ba66e8f5f935d252bfd19ed9ba0 253 PIRSF PIRSF006648 1 251 9.0E-27 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ATC04_08285 ddd69ba66e8f5f935d252bfd19ed9ba0 253 Pfam PF01061 ABC-2 type transporter 22 222 8.2E-17 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ATC04_17130 42e7bf51d867cf883adc9df01339df29 325 SUPERFAMILY SSF52402 170 310 1.17E-27 T 11-10-2018 ATC04_17130 42e7bf51d867cf883adc9df01339df29 325 SUPERFAMILY SSF52402 14 150 1.93E-30 T 11-10-2018 ATC04_17130 42e7bf51d867cf883adc9df01339df29 325 Gene3D G3DSA:3.40.50.620 7 149 1.3E-37 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_17130 42e7bf51d867cf883adc9df01339df29 325 Gene3D G3DSA:3.40.50.620 159 314 3.1E-35 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_17130 42e7bf51d867cf883adc9df01339df29 325 Pfam PF00582 Universal stress protein family 15 150 1.4E-23 T 11-10-2018 IPR006016 UspA ATC04_17130 42e7bf51d867cf883adc9df01339df29 325 Pfam PF00582 Universal stress protein family 169 306 9.0E-20 T 11-10-2018 IPR006016 UspA ATC04_17130 42e7bf51d867cf883adc9df01339df29 325 PRINTS PR01438 Universal stress protein signature 110 122 4.2E-14 T 11-10-2018 IPR006015 Universal stress protein A ATC04_17130 42e7bf51d867cf883adc9df01339df29 325 PRINTS PR01438 Universal stress protein signature 12 30 4.2E-14 T 11-10-2018 IPR006015 Universal stress protein A ATC04_17130 42e7bf51d867cf883adc9df01339df29 325 PRINTS PR01438 Universal stress protein signature 128 150 4.2E-14 T 11-10-2018 IPR006015 Universal stress protein A ATC04_07505 27ec1da7cfd4798d23aa67958be3f45e 422 Pfam PF07690 Major Facilitator Superfamily 19 361 1.3E-31 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_07505 27ec1da7cfd4798d23aa67958be3f45e 422 Gene3D G3DSA:1.20.1250.20 6 196 7.3E-22 T 11-10-2018 ATC04_07505 27ec1da7cfd4798d23aa67958be3f45e 422 Gene3D G3DSA:1.20.1250.20 210 416 1.4E-18 T 11-10-2018 ATC04_07505 27ec1da7cfd4798d23aa67958be3f45e 422 SUPERFAMILY SSF103473 6 410 4.58E-46 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_00600 b8e4245a6e79f7407254c4701bd420bb 322 Pfam PF01758 Sodium Bile acid symporter family 50 227 8.1E-42 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ATC04_00600 b8e4245a6e79f7407254c4701bd420bb 322 Gene3D G3DSA:1.20.1530.20 17 319 1.0E-103 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily ATC04_07675 68d18bc53e9d204527dab3f9a77750bf 197 Pfam PF04167 Protein of unknown function (DUF402) 74 143 7.6E-11 T 11-10-2018 IPR007295 Domain of unknown function DUF402 ATC04_07675 68d18bc53e9d204527dab3f9a77750bf 197 SUPERFAMILY SSF159234 75 187 1.11E-15 T 11-10-2018 IPR035930 FomD-like superfamily ATC04_07675 68d18bc53e9d204527dab3f9a77750bf 197 Gene3D G3DSA:2.40.380.10 18 189 3.3E-8 T 11-10-2018 IPR035930 FomD-like superfamily ATC04_03705 ebe6f547b122ce0fa1ed93b5fc8dba73 418 Gene3D G3DSA:1.20.1250.20 12 208 1.0E-16 T 11-10-2018 ATC04_03705 ebe6f547b122ce0fa1ed93b5fc8dba73 418 SUPERFAMILY SSF103473 24 411 6.8E-50 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_03705 ebe6f547b122ce0fa1ed93b5fc8dba73 418 Gene3D G3DSA:1.20.1250.20 230 416 5.4E-27 T 11-10-2018 ATC04_03705 ebe6f547b122ce0fa1ed93b5fc8dba73 418 Pfam PF07690 Major Facilitator Superfamily 51 298 7.6E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_02910 bf3f8537b39cdc050b8d064ce09570dd 281 SUPERFAMILY SSF52266 5 192 7.48E-35 T 11-10-2018 ATC04_02910 bf3f8537b39cdc050b8d064ce09570dd 281 Gene3D G3DSA:3.40.50.1110 5 195 1.7E-25 T 11-10-2018 IPR036514 SGNH hydrolase superfamily ATC04_02910 bf3f8537b39cdc050b8d064ce09570dd 281 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 7 182 6.7E-22 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain ATC04_17260 5178d45a9b430d14b46c08ca01ff7915 927 Gene3D G3DSA:3.30.70.2740 384 466 5.8E-8 T 11-10-2018 ATC04_17260 5178d45a9b430d14b46c08ca01ff7915 927 Pfam PF01565 FAD binding domain 32 168 7.9E-33 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ATC04_17260 5178d45a9b430d14b46c08ca01ff7915 927 Gene3D G3DSA:3.30.465.40 2 186 1.6E-33 T 11-10-2018 ATC04_17260 5178d45a9b430d14b46c08ca01ff7915 927 SUPERFAMILY SSF56176 8 255 2.66E-50 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ATC04_17260 5178d45a9b430d14b46c08ca01ff7915 927 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 531 542 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ATC04_17260 5178d45a9b430d14b46c08ca01ff7915 927 SUPERFAMILY SSF55103 231 508 5.23E-44 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ATC04_17260 5178d45a9b430d14b46c08ca01ff7915 927 Pfam PF02754 Cysteine-rich domain 826 904 0.095 T 11-10-2018 IPR004017 Cysteine-rich domain ATC04_17260 5178d45a9b430d14b46c08ca01ff7915 927 Pfam PF02754 Cysteine-rich domain 715 787 0.012 T 11-10-2018 IPR004017 Cysteine-rich domain ATC04_17260 5178d45a9b430d14b46c08ca01ff7915 927 Gene3D G3DSA:1.10.1060.10 500 624 1.4E-8 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ATC04_17260 5178d45a9b430d14b46c08ca01ff7915 927 Pfam PF02913 FAD linked oxidases, C-terminal domain 262 505 3.2E-47 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ATC04_17260 5178d45a9b430d14b46c08ca01ff7915 927 Pfam PF13183 4Fe-4S dicluster domain 528 601 5.9E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ATC04_17260 5178d45a9b430d14b46c08ca01ff7915 927 SUPERFAMILY SSF46548 492 614 1.57E-18 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ATC04_05575 90d6004d26447328427123deb723edac 292 Pfam PF01435 Peptidase family M48 73 286 4.7E-35 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ATC04_05575 90d6004d26447328427123deb723edac 292 Hamap MF_00188 Protease HtpX [htpX]. 7 286 26.7 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 ATC04_05575 90d6004d26447328427123deb723edac 292 Gene3D G3DSA:3.30.2010.10 65 156 5.0E-28 T 11-10-2018 ATC04_06615 e725919ecef4ed3942d6e254fc81e4b4 347 SUPERFAMILY SSF159245 22 268 4.97E-9 T 11-10-2018 ATC04_06615 e725919ecef4ed3942d6e254fc81e4b4 347 Pfam PF14249 Tocopherol cyclase 144 322 4.3E-16 T 11-10-2018 IPR025893 Tocopherol cyclase GO:0009976 ATC04_13750 0f0ff808096ed0b17fc16284859114a6 502 Pfam PF02934 GatB/GatE catalytic domain 21 315 2.9E-102 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 ATC04_13750 0f0ff808096ed0b17fc16284859114a6 502 SMART SM00845 353 500 1.5E-57 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 ATC04_13750 0f0ff808096ed0b17fc16284859114a6 502 Gene3D G3DSA:1.10.150.380 323 438 8.8E-17 T 11-10-2018 ATC04_13750 0f0ff808096ed0b17fc16284859114a6 502 Gene3D G3DSA:1.10.10.410 440 501 1.6E-16 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal ATC04_13750 0f0ff808096ed0b17fc16284859114a6 502 Pfam PF02637 GatB domain 354 500 5.7E-41 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 ATC04_13750 0f0ff808096ed0b17fc16284859114a6 502 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 166 180 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 ATC04_13750 0f0ff808096ed0b17fc16284859114a6 502 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 17 501 34.619 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 ATC04_13750 0f0ff808096ed0b17fc16284859114a6 502 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 18 500 1.6E-141 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 ATC04_13750 0f0ff808096ed0b17fc16284859114a6 502 SUPERFAMILY SSF55931 20 322 9.81E-110 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ATC04_13750 0f0ff808096ed0b17fc16284859114a6 502 SUPERFAMILY SSF89095 353 500 3.01E-25 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 ATC04_07265 70299a8a069901ab1d287aaf6f27e6c2 1604 SUPERFAMILY SSF51735 941 1279 5.64E-23 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_07265 70299a8a069901ab1d287aaf6f27e6c2 1604 SUPERFAMILY SSF53223 750 937 1.34E-20 T 11-10-2018 ATC04_07265 70299a8a069901ab1d287aaf6f27e6c2 1604 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 62 1599 0.0 T 11-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 ATC04_07265 70299a8a069901ab1d287aaf6f27e6c2 1604 PIRSF PIRSF036761 3 1604 0.0 T 11-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 ATC04_11060 768f3053ae35bc7158bf4dfbe4753eeb 640 Pfam PF13641 Glycosyltransferase like family 2 259 493 1.3E-31 T 11-10-2018 ATC04_11060 768f3053ae35bc7158bf4dfbe4753eeb 640 Gene3D G3DSA:3.90.550.10 246 475 4.3E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_11060 768f3053ae35bc7158bf4dfbe4753eeb 640 SUPERFAMILY SSF160246 4 142 4.71E-22 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily ATC04_11060 768f3053ae35bc7158bf4dfbe4753eeb 640 SUPERFAMILY SSF53448 260 505 5.25E-37 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_11060 768f3053ae35bc7158bf4dfbe4753eeb 640 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 44 144 1.3E-11 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal ATC04_01915 107fd8eaa450ed3166275e59cb889116 400 Pfam PF07690 Major Facilitator Superfamily 21 334 1.6E-12 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_01915 107fd8eaa450ed3166275e59cb889116 400 SUPERFAMILY SSF103473 5 399 1.09E-32 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_01915 107fd8eaa450ed3166275e59cb889116 400 Gene3D G3DSA:1.20.1250.20 208 395 3.6E-12 T 11-10-2018 ATC04_01915 107fd8eaa450ed3166275e59cb889116 400 Gene3D G3DSA:1.20.1250.20 16 194 3.0E-11 T 11-10-2018 ATC04_06045 1631c58295a7d42373859c6a3e2f5e54 124 SUPERFAMILY SSF54736 53 124 1.1E-23 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ATC04_06045 1631c58295a7d42373859c6a3e2f5e54 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 2.2E-46 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06045 1631c58295a7d42373859c6a3e2f5e54 124 SUPERFAMILY SSF48300 5 60 3.14E-15 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06045 1631c58295a7d42373859c6a3e2f5e54 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 1.1E-15 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06045 1631c58295a7d42373859c6a3e2f5e54 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 124 23.816 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06045 1631c58295a7d42373859c6a3e2f5e54 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 124 7.0E-15 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06045 1631c58295a7d42373859c6a3e2f5e54 124 Gene3D G3DSA:3.30.1390.10 54 124 1.8E-30 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ATC04_06045 1631c58295a7d42373859c6a3e2f5e54 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 5.5E-28 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06045 1631c58295a7d42373859c6a3e2f5e54 124 Gene3D G3DSA:1.20.5.710 4 53 6.3E-17 T 11-10-2018 ATC04_14020 c1d61dddda2a85acabb5b98e9d87e696 307 SUPERFAMILY SSF55781 15 153 4.25E-9 T 11-10-2018 ATC04_14020 c1d61dddda2a85acabb5b98e9d87e696 307 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 158 304 8.6E-29 T 11-10-2018 IPR000160 GGDEF domain ATC04_14020 c1d61dddda2a85acabb5b98e9d87e696 307 SMART SM00065 8 151 0.0019 T 11-10-2018 IPR003018 GAF domain GO:0005515 ATC04_14020 c1d61dddda2a85acabb5b98e9d87e696 307 Pfam PF00990 Diguanylate cyclase, GGDEF domain 161 305 2.1E-25 T 11-10-2018 IPR000160 GGDEF domain ATC04_14020 c1d61dddda2a85acabb5b98e9d87e696 307 Gene3D G3DSA:3.30.70.270 154 307 7.6E-36 T 11-10-2018 ATC04_14020 c1d61dddda2a85acabb5b98e9d87e696 307 SUPERFAMILY SSF55073 166 305 3.14E-30 T 11-10-2018 IPR029787 Nucleotide cyclase ATC04_14020 c1d61dddda2a85acabb5b98e9d87e696 307 SMART SM00267 150 307 8.4E-23 T 11-10-2018 IPR000160 GGDEF domain ATC04_14020 c1d61dddda2a85acabb5b98e9d87e696 307 Gene3D G3DSA:3.30.450.40 3 153 3.0E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_10210 07e6ab1fa5a53db233dd58b01dde7c75 516 Pfam PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 100 338 2.9E-65 T 11-10-2018 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 ATC04_16410 57345328fa221c033aa71f1c4be59037 346 Gene3D G3DSA:2.60.120.330 1 310 1.9E-74 T 11-10-2018 IPR027443 Isopenicillin N synthase-like ATC04_16410 57345328fa221c033aa71f1c4be59037 346 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 189 282 1.6E-18 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ATC04_16410 57345328fa221c033aa71f1c4be59037 346 SUPERFAMILY SSF51197 5 289 1.99E-74 T 11-10-2018 ATC04_16410 57345328fa221c033aa71f1c4be59037 346 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 8 132 8.6E-22 T 11-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain ATC04_11365 89802aa2485e36a1799ca3a7c4d261ec 229 SUPERFAMILY SSF88946 1 37 2.25E-6 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_11365 89802aa2485e36a1799ca3a7c4d261ec 229 Gene3D G3DSA:1.20.140.160 36 179 3.1E-26 T 11-10-2018 ATC04_11365 89802aa2485e36a1799ca3a7c4d261ec 229 Pfam PF04539 Sigma-70 region 3 50 92 1.3E-8 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 ATC04_11365 89802aa2485e36a1799ca3a7c4d261ec 229 Gene3D G3DSA:1.10.1740.10 1 34 4.6E-5 T 11-10-2018 ATC04_11365 89802aa2485e36a1799ca3a7c4d261ec 229 SUPERFAMILY SSF88659 109 176 9.16E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ATC04_11365 89802aa2485e36a1799ca3a7c4d261ec 229 Pfam PF04542 Sigma-70 region 2 2 37 4.0E-5 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_11365 89802aa2485e36a1799ca3a7c4d261ec 229 SUPERFAMILY SSF88659 40 100 1.0E-7 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ATC04_11365 89802aa2485e36a1799ca3a7c4d261ec 229 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 175 4.3E-16 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ATC04_14945 6ebcdbd50f67cd41183257d040a926be 445 Pfam PF00083 Sugar (and other) transporter 68 444 1.0E-43 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_14945 6ebcdbd50f67cd41183257d040a926be 445 SUPERFAMILY SSF103473 16 444 3.27E-78 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_14945 6ebcdbd50f67cd41183257d040a926be 445 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_14945 6ebcdbd50f67cd41183257d040a926be 445 Gene3D G3DSA:1.20.1250.20 20 445 1.0E-86 T 11-10-2018 ATC04_14945 6ebcdbd50f67cd41183257d040a926be 445 ProSitePatterns PS00217 Sugar transport proteins signature 2. 122 147 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_07135 2296150ecf77d49ae03e950b65ff8a5c 98 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 29 97 7.2E-22 T 11-10-2018 IPR018720 Domain of unknown function DUF2249 ATC04_12645 bbe1da41a30d169811925723046558f1 305 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 300 26.469 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ATC04_12645 bbe1da41a30d169811925723046558f1 305 SUPERFAMILY SSF52540 8 149 5.13E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12645 bbe1da41a30d169811925723046558f1 305 Gene3D G3DSA:3.40.50.300 12 285 8.0E-86 T 11-10-2018 ATC04_12645 bbe1da41a30d169811925723046558f1 305 Gene3D G3DSA:1.10.20.140 115 183 8.0E-86 T 11-10-2018 ATC04_12645 bbe1da41a30d169811925723046558f1 305 Pfam PF01715 IPP transferase 41 280 9.7E-69 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ATC04_12645 bbe1da41a30d169811925723046558f1 305 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 8 289 1.5E-78 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ATC04_02800 e4170eabc8b369758add20a1cd90ebc6 64 Pfam PF00403 Heavy-metal-associated domain 1 58 3.0E-12 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ATC04_02800 e4170eabc8b369758add20a1cd90ebc6 64 Gene3D G3DSA:3.30.70.100 1 62 3.6E-16 T 11-10-2018 ATC04_02800 e4170eabc8b369758add20a1cd90ebc6 64 SUPERFAMILY SSF55008 1 62 6.28E-12 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ATC04_11010 3e191b3e5c9bef08a369d5b7e28fc858 340 Gene3D G3DSA:3.40.50.720 4 299 2.1E-113 T 11-10-2018 ATC04_11010 3e191b3e5c9bef08a369d5b7e28fc858 340 Gene3D G3DSA:3.90.25.10 185 313 2.1E-113 T 11-10-2018 ATC04_11010 3e191b3e5c9bef08a369d5b7e28fc858 340 SUPERFAMILY SSF51735 1 322 2.96E-91 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_11010 3e191b3e5c9bef08a369d5b7e28fc858 340 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 318 6.5E-138 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 ATC04_11010 3e191b3e5c9bef08a369d5b7e28fc858 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 301 2.3E-75 T 11-10-2018 IPR016040 NAD(P)-binding domain ATC04_05525 916c3553f61722d7335298656ad7155d 263 SUPERFAMILY SSF161098 52 247 1.27E-41 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_05525 916c3553f61722d7335298656ad7155d 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 257 3.3E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_05525 916c3553f61722d7335298656ad7155d 263 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 53 149 6.7E-21 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ATC04_05525 916c3553f61722d7335298656ad7155d 263 Gene3D G3DSA:1.10.3720.10 41 261 9.1E-50 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_11050 c5e22ed8db67c011a98268cbc79b91fd 567 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 24 564 3.1E-220 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATC04_11050 c5e22ed8db67c011a98268cbc79b91fd 567 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 11 567 46.141 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATC04_11050 c5e22ed8db67c011a98268cbc79b91fd 567 Gene3D G3DSA:3.50.30.80 389 537 4.3E-51 T 11-10-2018 ATC04_11050 c5e22ed8db67c011a98268cbc79b91fd 567 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 475 486 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATC04_11050 c5e22ed8db67c011a98268cbc79b91fd 567 SUPERFAMILY SSF52016 389 566 1.8E-56 T 11-10-2018 ATC04_11050 c5e22ed8db67c011a98268cbc79b91fd 567 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 129 139 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATC04_11050 c5e22ed8db67c011a98268cbc79b91fd 567 Pfam PF00920 Dehydratase family 41 564 1.8E-213 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATC04_11050 c5e22ed8db67c011a98268cbc79b91fd 567 SUPERFAMILY SSF143975 5 388 6.54E-139 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATC04_12325 4fa97ddbd62a088ce7312777d8290b30 246 Pfam PF01988 VIT family 31 238 2.7E-54 T 11-10-2018 IPR008217 Ccc1 family ATC04_17165 9002c3bd0131f59f877b2114193e185d 102 SUPERFAMILY SSF89957 2 99 1.23E-28 T 11-10-2018 IPR029756 MTH1187/YkoF-like ATC04_17165 9002c3bd0131f59f877b2114193e185d 102 Gene3D G3DSA:3.30.70.930 1 99 5.0E-22 T 11-10-2018 IPR029756 MTH1187/YkoF-like ATC04_17165 9002c3bd0131f59f877b2114193e185d 102 Pfam PF01910 Thiamine-binding protein 3 93 2.5E-26 T 11-10-2018 IPR002767 Thiamine-binding protein ATC04_03995 4edb37ee150a3f51f7e56428692511b3 452 SUPERFAMILY SSF51905 239 354 2.59E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03995 4edb37ee150a3f51f7e56428692511b3 452 Gene3D G3DSA:3.50.50.60 1 402 4.4E-152 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03995 4edb37ee150a3f51f7e56428692511b3 452 Pfam PF00743 Flavin-binding monooxygenase-like 229 366 1.1E-7 T 11-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 ATC04_03995 4edb37ee150a3f51f7e56428692511b3 452 Pfam PF00743 Flavin-binding monooxygenase-like 19 216 1.4E-26 T 11-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 ATC04_03995 4edb37ee150a3f51f7e56428692511b3 452 SUPERFAMILY SSF51905 18 228 3.52E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03995 4edb37ee150a3f51f7e56428692511b3 452 Gene3D G3DSA:3.50.50.60 159 258 4.4E-152 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00500 4d9afe46d8a3f0f9d0f641034b500ed6 178 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 95 153 2.0E-16 T 11-10-2018 ATC04_17015 91724feb6f0230f843b4a6b1fa61499b 265 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 2 218 1.8E-42 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA ATC04_17015 91724feb6f0230f843b4a6b1fa61499b 265 Gene3D G3DSA:3.40.50.1000 74 169 5.0E-76 T 11-10-2018 IPR023214 HAD superfamily ATC04_17015 91724feb6f0230f843b4a6b1fa61499b 265 Pfam PF13344 Haloacid dehalogenase-like hydrolase 1 96 6.0E-23 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA ATC04_17015 91724feb6f0230f843b4a6b1fa61499b 265 SUPERFAMILY SSF56784 1 242 1.79E-64 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_17015 91724feb6f0230f843b4a6b1fa61499b 265 Pfam PF13242 HAD-hyrolase-like 169 241 2.5E-20 T 11-10-2018 ATC04_17015 91724feb6f0230f843b4a6b1fa61499b 265 Gene3D G3DSA:3.40.50.1000 1 232 5.0E-76 T 11-10-2018 IPR023214 HAD superfamily ATC04_06265 d873e4495b761358f721aa0c75714146 294 SUPERFAMILY SSF55120 2 265 4.32E-63 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_06265 d873e4495b761358f721aa0c75714146 294 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 256 28.206 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_06265 d873e4495b761358f721aa0c75714146 294 Gene3D G3DSA:3.30.70.660 117 259 4.3E-32 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 ATC04_06265 d873e4495b761358f721aa0c75714146 294 Pfam PF01416 tRNA pseudouridine synthase 156 257 2.1E-16 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_06265 d873e4495b761358f721aa0c75714146 294 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 249 1.2E-45 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_06265 d873e4495b761358f721aa0c75714146 294 Gene3D G3DSA:3.30.70.580 1 116 1.8E-27 T 11-10-2018 ATC04_06265 d873e4495b761358f721aa0c75714146 294 PIRSF PIRSF001430 1 273 4.4E-65 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_01725 ee46e60d4cc1e204df2b8718c2c09716 439 Gene3D G3DSA:3.90.1150.10 19 404 6.4E-177 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_01725 ee46e60d4cc1e204df2b8718c2c09716 439 SUPERFAMILY SSF53383 11 432 2.09E-172 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_01725 ee46e60d4cc1e204df2b8718c2c09716 439 Gene3D G3DSA:3.40.640.10 46 297 6.4E-177 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_01725 ee46e60d4cc1e204df2b8718c2c09716 439 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 16 432 50.425 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ATC04_01725 ee46e60d4cc1e204df2b8718c2c09716 439 Pfam PF00464 Serine hydroxymethyltransferase 18 399 1.7E-165 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ATC04_01725 ee46e60d4cc1e204df2b8718c2c09716 439 PIRSF PIRSF000412 2 436 1.9E-158 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ATC04_01725 ee46e60d4cc1e204df2b8718c2c09716 439 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 231 247 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ATC04_16005 24e97a220bac3a3aa046ade49266c71f 401 SUPERFAMILY SSF51695 36 282 5.23E-61 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ATC04_16005 24e97a220bac3a3aa046ade49266c71f 401 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 40 277 1.6E-33 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ATC04_16005 24e97a220bac3a3aa046ade49266c71f 401 SUPERFAMILY SSF74853 311 399 5.89E-11 T 11-10-2018 IPR036415 Lamin tail domain superfamily ATC04_16005 24e97a220bac3a3aa046ade49266c71f 401 Gene3D G3DSA:3.20.20.190 20 287 3.5E-65 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ATC04_16005 24e97a220bac3a3aa046ade49266c71f 401 Pfam PF00932 Lamin Tail Domain 291 399 1.9E-14 T 11-10-2018 IPR001322 Lamin tail domain ATC04_01415 30f0ace888f7dfda7fb9c352f4c6fa48 290 Pfam PF01144 Coenzyme A transferase 8 207 1.2E-43 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_01415 30f0ace888f7dfda7fb9c352f4c6fa48 290 SMART SM00882 5 226 3.2E-37 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_01415 30f0ace888f7dfda7fb9c352f4c6fa48 290 Gene3D G3DSA:3.30.30.40 115 151 2.2E-76 T 11-10-2018 ATC04_01415 30f0ace888f7dfda7fb9c352f4c6fa48 290 SUPERFAMILY SSF100950 3 269 4.29E-73 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_01415 30f0ace888f7dfda7fb9c352f4c6fa48 290 Gene3D G3DSA:3.40.1080.10 7 269 2.2E-76 T 11-10-2018 ATC04_13095 7105febe3a19e72b38a96b2dd6ec08a3 517 Gene3D G3DSA:2.60.40.650 407 517 1.9E-24 T 11-10-2018 ATC04_13095 7105febe3a19e72b38a96b2dd6ec08a3 517 SUPERFAMILY SSF56524 225 414 2.09E-53 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 ATC04_13095 7105febe3a19e72b38a96b2dd6ec08a3 517 Gene3D G3DSA:3.90.420.10 179 406 1.1E-44 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 ATC04_13095 7105febe3a19e72b38a96b2dd6ec08a3 517 Pfam PF00174 Oxidoreductase molybdopterin binding domain 243 390 7.2E-36 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 ATC04_13095 7105febe3a19e72b38a96b2dd6ec08a3 517 SUPERFAMILY SSF81296 406 516 3.36E-24 T 11-10-2018 IPR014756 Immunoglobulin E-set ATC04_13095 7105febe3a19e72b38a96b2dd6ec08a3 517 PRINTS PR00407 Eukaryotic molybdopterin domain signature 293 308 4.4E-5 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 ATC04_13095 7105febe3a19e72b38a96b2dd6ec08a3 517 PRINTS PR00407 Eukaryotic molybdopterin domain signature 356 369 4.4E-5 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 ATC04_13095 7105febe3a19e72b38a96b2dd6ec08a3 517 PRINTS PR00407 Eukaryotic molybdopterin domain signature 457 469 4.4E-5 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 ATC04_16450 883836ea0f35fd912c0ea548c93b1a6e 561 Gene3D G3DSA:1.20.1720.10 10 232 1.5E-45 T 11-10-2018 ATC04_16450 883836ea0f35fd912c0ea548c93b1a6e 561 Pfam PF07690 Major Facilitator Superfamily 13 407 7.2E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_16450 883836ea0f35fd912c0ea548c93b1a6e 561 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 488 3.2E-72 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ATC04_16450 883836ea0f35fd912c0ea548c93b1a6e 561 SUPERFAMILY SSF103473 8 500 1.83E-64 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_16450 883836ea0f35fd912c0ea548c93b1a6e 561 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 1.9E-14 T 11-10-2018 ATC04_16450 883836ea0f35fd912c0ea548c93b1a6e 561 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 1.9E-14 T 11-10-2018 ATC04_16450 883836ea0f35fd912c0ea548c93b1a6e 561 PRINTS PR01036 Tetracycline resistance protein TetB signature 398 417 1.9E-14 T 11-10-2018 ATC04_16450 883836ea0f35fd912c0ea548c93b1a6e 561 PRINTS PR01036 Tetracycline resistance protein TetB signature 103 123 1.9E-14 T 11-10-2018 ATC04_16450 883836ea0f35fd912c0ea548c93b1a6e 561 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 1.9E-14 T 11-10-2018 ATC04_09495 ebb43d8f12cc0f3a7d5d201c9fdb4e81 469 Pfam PF01546 Peptidase family M20/M25/M40 103 461 6.8E-27 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ATC04_09495 ebb43d8f12cc0f3a7d5d201c9fdb4e81 469 SUPERFAMILY SSF53187 18 463 4.29E-51 T 11-10-2018 ATC04_09495 ebb43d8f12cc0f3a7d5d201c9fdb4e81 469 Gene3D G3DSA:3.40.630.10 32 455 1.1E-115 T 11-10-2018 ATC04_09495 ebb43d8f12cc0f3a7d5d201c9fdb4e81 469 Pfam PF07687 Peptidase dimerisation domain 215 361 3.9E-14 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ATC04_09495 ebb43d8f12cc0f3a7d5d201c9fdb4e81 469 Gene3D G3DSA:3.30.70.360 223 383 1.1E-115 T 11-10-2018 ATC04_13655 fb3e003ded3be42171d8ab51869df449 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 4.0E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_13655 fb3e003ded3be42171d8ab51869df449 315 Gene3D G3DSA:1.10.3720.10 22 302 4.7E-53 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_13655 fb3e003ded3be42171d8ab51869df449 315 SUPERFAMILY SSF161098 30 315 3.92E-61 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_05905 87bfb84b5c03b2a3733a83471cda7669 146 Gene3D G3DSA:3.10.129.10 1 146 8.0E-39 T 11-10-2018 ATC04_05905 87bfb84b5c03b2a3733a83471cda7669 146 PRINTS PR01483 Fatty acid synthase signature 22 44 2.6E-7 T 11-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 ATC04_05905 87bfb84b5c03b2a3733a83471cda7669 146 PRINTS PR01483 Fatty acid synthase signature 44 65 2.6E-7 T 11-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 ATC04_05905 87bfb84b5c03b2a3733a83471cda7669 146 SUPERFAMILY SSF54637 4 143 2.24E-25 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_05905 87bfb84b5c03b2a3733a83471cda7669 146 Pfam PF01575 MaoC like domain 11 93 1.9E-23 T 11-10-2018 IPR002539 MaoC-like dehydratase domain ATC04_14900 9d616a4b1a473fae9d0bb048d603d52a 422 Gene3D G3DSA:1.20.1250.20 210 404 6.2E-8 T 11-10-2018 ATC04_14900 9d616a4b1a473fae9d0bb048d603d52a 422 SUPERFAMILY SSF103473 8 411 8.24E-34 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_14900 9d616a4b1a473fae9d0bb048d603d52a 422 Pfam PF07690 Major Facilitator Superfamily 12 363 3.5E-23 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_14900 9d616a4b1a473fae9d0bb048d603d52a 422 Gene3D G3DSA:1.20.1250.20 3 198 4.6E-21 T 11-10-2018 ATC04_17480 7945824d1e273e046d593ef112301d62 266 Pfam PF06724 Domain of Unknown Function (DUF1206) 25 90 3.9E-16 T 11-10-2018 IPR009597 Domain of unknown function DUF1206 ATC04_17480 7945824d1e273e046d593ef112301d62 266 Pfam PF06724 Domain of Unknown Function (DUF1206) 103 169 1.2E-10 T 11-10-2018 IPR009597 Domain of unknown function DUF1206 ATC04_17480 7945824d1e273e046d593ef112301d62 266 Pfam PF06724 Domain of Unknown Function (DUF1206) 193 261 3.9E-15 T 11-10-2018 IPR009597 Domain of unknown function DUF1206 ATC04_15975 fb6a2b7d4a5dfa5beb96bf57df98664e 135 Gene3D G3DSA:3.90.1170.40 1 135 6.8E-41 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ATC04_15975 fb6a2b7d4a5dfa5beb96bf57df98664e 135 SUPERFAMILY SSF54690 5 133 4.45E-37 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ATC04_15975 fb6a2b7d4a5dfa5beb96bf57df98664e 135 Pfam PF02391 MoaE protein 6 115 1.5E-30 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ATC04_10670 a5296602d8c06cc56fca51ccd09863ca 251 SMART SM00563 44 162 2.2E-36 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ATC04_10670 a5296602d8c06cc56fca51ccd09863ca 251 SUPERFAMILY SSF69593 17 232 3.4E-47 T 11-10-2018 ATC04_10670 a5296602d8c06cc56fca51ccd09863ca 251 Pfam PF01553 Acyltransferase 35 159 4.8E-24 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ATC04_06790 87bac6c392c2ea0121a0a9db69bc92d8 371 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 223 236 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 ATC04_06790 87bac6c392c2ea0121a0a9db69bc92d8 371 Gene3D G3DSA:3.40.640.10 38 272 1.2E-82 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_06790 87bac6c392c2ea0121a0a9db69bc92d8 371 SUPERFAMILY SSF53383 17 368 2.5E-74 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_06790 87bac6c392c2ea0121a0a9db69bc92d8 371 Pfam PF00155 Aminotransferase class I and II 26 365 9.7E-38 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATC04_06790 87bac6c392c2ea0121a0a9db69bc92d8 371 TIGRFAM TIGR03539 DapC_actino: succinyldiaminopimelate transaminase 4 365 2.8E-165 T 11-10-2018 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ ATC04_06790 87bac6c392c2ea0121a0a9db69bc92d8 371 Gene3D G3DSA:3.90.1150.10 15 358 1.2E-82 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_13575 31807411d8d5ae61707bfa39439e4ca1 235 SUPERFAMILY SSF110395 7 229 2.62E-49 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 ATC04_13575 31807411d8d5ae61707bfa39439e4ca1 235 Gene3D G3DSA:3.20.20.380 5 234 1.6E-60 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 ATC04_13575 31807411d8d5ae61707bfa39439e4ca1 235 Pfam PF03932 CutC family 7 209 1.0E-50 T 11-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 ATC04_13575 31807411d8d5ae61707bfa39439e4ca1 235 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 5 211 24.542 T 11-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 ATC04_03515 378a5779ac2360d18f5be7ed9e4a6c19 309 Gene3D G3DSA:3.40.50.720 2 163 1.6E-46 T 11-10-2018 ATC04_03515 378a5779ac2360d18f5be7ed9e4a6c19 309 Gene3D G3DSA:1.10.1040.10 166 294 6.8E-37 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATC04_03515 378a5779ac2360d18f5be7ed9e4a6c19 309 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 159 1.8E-41 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ATC04_03515 378a5779ac2360d18f5be7ed9e4a6c19 309 PIRSF PIRSF000103 2 294 5.5E-72 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 ATC04_03515 378a5779ac2360d18f5be7ed9e4a6c19 309 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 290 6.5E-88 T 11-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 ATC04_03515 378a5779ac2360d18f5be7ed9e4a6c19 309 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 290 2.9E-27 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ATC04_03515 378a5779ac2360d18f5be7ed9e4a6c19 309 SUPERFAMILY SSF51735 5 162 2.23E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_03515 378a5779ac2360d18f5be7ed9e4a6c19 309 SUPERFAMILY SSF48179 166 291 3.51E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ATC04_11145 d88584fcb92133f9a64af298f8aff4c0 164 Gene3D G3DSA:3.40.30.10 11 160 1.1E-47 T 11-10-2018 ATC04_11145 d88584fcb92133f9a64af298f8aff4c0 164 Pfam PF00578 AhpC/TSA family 13 140 5.5E-39 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ATC04_11145 d88584fcb92133f9a64af298f8aff4c0 164 SUPERFAMILY SSF52833 10 159 1.99E-48 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_11145 d88584fcb92133f9a64af298f8aff4c0 164 PIRSF PIRSF000239 6 157 2.2E-20 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ATC04_10375 4aca1afefbf6108f38ced03115c28381 274 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 226 6.6E-64 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ATC04_10375 4aca1afefbf6108f38ced03115c28381 274 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 274 100.241 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ATC04_10375 4aca1afefbf6108f38ced03115c28381 274 Gene3D G3DSA:3.40.1280.10 1 168 5.1E-67 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATC04_10375 4aca1afefbf6108f38ced03115c28381 274 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 232 9.5E-79 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ATC04_10375 4aca1afefbf6108f38ced03115c28381 274 SUPERFAMILY SSF75217 1 241 7.85E-90 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ATC04_10375 4aca1afefbf6108f38ced03115c28381 274 PIRSF PIRSF000386 1 253 3.7E-92 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ATC04_10375 4aca1afefbf6108f38ced03115c28381 274 Gene3D G3DSA:1.10.1270.20 169 249 5.2E-27 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ATC04_00110 aa9dbc275398a5fdc5c54c76ef2a15e6 132 SMART SM00342 26 108 1.3E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATC04_00110 aa9dbc275398a5fdc5c54c76ef2a15e6 132 Gene3D G3DSA:1.10.10.60 6 114 3.6E-27 T 11-10-2018 ATC04_00110 aa9dbc275398a5fdc5c54c76ef2a15e6 132 SUPERFAMILY SSF46689 62 112 1.16E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_00110 aa9dbc275398a5fdc5c54c76ef2a15e6 132 SUPERFAMILY SSF46689 11 59 1.97E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_00110 aa9dbc275398a5fdc5c54c76ef2a15e6 132 Pfam PF12833 Helix-turn-helix domain 32 110 9.1E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATC04_13085 8793f62118a27e47e708cd4610806592 193 SUPERFAMILY SSF88659 122 190 7.29E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ATC04_13085 8793f62118a27e47e708cd4610806592 193 SUPERFAMILY SSF88946 18 116 4.91E-25 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_13085 8793f62118a27e47e708cd4610806592 193 Pfam PF08281 Sigma-70, region 4 134 186 1.3E-12 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATC04_13085 8793f62118a27e47e708cd4610806592 193 Pfam PF04542 Sigma-70 region 2 35 102 1.8E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_13085 8793f62118a27e47e708cd4610806592 193 Gene3D G3DSA:1.10.10.10 101 193 3.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_13085 8793f62118a27e47e708cd4610806592 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 188 5.7E-26 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ATC04_13085 8793f62118a27e47e708cd4610806592 193 Gene3D G3DSA:1.10.1740.10 17 99 9.6E-34 T 11-10-2018 ATC04_11120 59c6924f9f004c1771ad9f03d4aec24d 168 Gene3D G3DSA:1.10.10.10 10 152 3.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_11120 59c6924f9f004c1771ad9f03d4aec24d 168 SMART SM00347 35 149 2.7E-4 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_11120 59c6924f9f004c1771ad9f03d4aec24d 168 SUPERFAMILY SSF46785 17 144 1.57E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_11120 59c6924f9f004c1771ad9f03d4aec24d 168 Pfam PF01047 MarR family 42 99 1.4E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_09295 c4376d90f82d3aa5792df4ecbaa68629 187 Gene3D G3DSA:3.40.50.300 7 178 1.2E-60 T 11-10-2018 ATC04_09295 c4376d90f82d3aa5792df4ecbaa68629 187 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 181 1.0E-66 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 ATC04_09295 c4376d90f82d3aa5792df4ecbaa68629 187 Hamap MF_00328 Guanylate kinase [gmk]. 2 186 34.781 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 ATC04_09295 c4376d90f82d3aa5792df4ecbaa68629 187 Gene3D G3DSA:3.30.63.10 35 97 1.2E-60 T 11-10-2018 ATC04_09295 c4376d90f82d3aa5792df4ecbaa68629 187 ProSitePatterns PS00856 Guanylate kinase-like signature. 38 55 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 ATC04_09295 c4376d90f82d3aa5792df4ecbaa68629 187 Pfam PF00625 Guanylate kinase 7 181 2.0E-42 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ATC04_09295 c4376d90f82d3aa5792df4ecbaa68629 187 SUPERFAMILY SSF52540 7 182 2.78E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09295 c4376d90f82d3aa5792df4ecbaa68629 187 SMART SM00072 4 186 2.0E-55 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ATC04_03160 6e7a1752932697d336fc2d9abd95ff50 455 SUPERFAMILY SSF55103 226 453 6.38E-42 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ATC04_03160 6e7a1752932697d336fc2d9abd95ff50 455 Gene3D G3DSA:1.10.45.10 415 455 5.0E-5 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ATC04_03160 6e7a1752932697d336fc2d9abd95ff50 455 Gene3D G3DSA:3.30.70.2740 333 414 4.0E-12 T 11-10-2018 ATC04_03160 6e7a1752932697d336fc2d9abd95ff50 455 SUPERFAMILY SSF56176 11 217 3.55E-66 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ATC04_03160 6e7a1752932697d336fc2d9abd95ff50 455 Pfam PF02913 FAD linked oxidases, C-terminal domain 227 452 8.9E-45 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ATC04_03160 6e7a1752932697d336fc2d9abd95ff50 455 Gene3D G3DSA:3.30.465.40 21 238 1.2E-68 T 11-10-2018 ATC04_03160 6e7a1752932697d336fc2d9abd95ff50 455 Pfam PF01565 FAD binding domain 46 184 1.4E-42 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ATC04_03945 29e6ffc58c63ff4305e4055cd7c8f9c3 502 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_03945 29e6ffc58c63ff4305e4055cd7c8f9c3 502 Gene3D G3DSA:3.40.50.300 249 497 4.2E-42 T 11-10-2018 ATC04_03945 29e6ffc58c63ff4305e4055cd7c8f9c3 502 Gene3D G3DSA:3.40.50.300 2 248 3.5E-52 T 11-10-2018 ATC04_03945 29e6ffc58c63ff4305e4055cd7c8f9c3 502 SUPERFAMILY SSF52540 243 482 3.93E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03945 29e6ffc58c63ff4305e4055cd7c8f9c3 502 SUPERFAMILY SSF52540 5 227 2.46E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03945 29e6ffc58c63ff4305e4055cd7c8f9c3 502 Pfam PF00005 ABC transporter 270 424 8.0E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_03945 29e6ffc58c63ff4305e4055cd7c8f9c3 502 SMART SM00382 279 473 2.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_03945 29e6ffc58c63ff4305e4055cd7c8f9c3 502 SMART SM00382 30 218 7.5E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_03945 29e6ffc58c63ff4305e4055cd7c8f9c3 502 Pfam PF00005 ABC transporter 21 170 1.2E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_14005 45a4b804e500cf3c6e1e18116f5ba9e0 450 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 29 417 2.9E-98 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 ATC04_14005 45a4b804e500cf3c6e1e18116f5ba9e0 450 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 25 423 20.332 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 ATC04_14005 45a4b804e500cf3c6e1e18116f5ba9e0 450 Gene3D G3DSA:1.20.1530.10 23 425 3.7E-131 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily ATC04_14005 45a4b804e500cf3c6e1e18116f5ba9e0 450 Pfam PF06965 Na+/H+ antiporter 1 28 417 2.4E-128 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 ATC04_04860 3855eedb8009d118ff4a7fc844d41687 991 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 248 274 1.8E-33 T 11-10-2018 ATC04_04860 3855eedb8009d118ff4a7fc844d41687 991 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 226 247 1.8E-33 T 11-10-2018 ATC04_04860 3855eedb8009d118ff4a7fc844d41687 991 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 83 108 1.8E-33 T 11-10-2018 ATC04_04860 3855eedb8009d118ff4a7fc844d41687 991 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 1.8E-33 T 11-10-2018 ATC04_04860 3855eedb8009d118ff4a7fc844d41687 991 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 316 328 1.8E-33 T 11-10-2018 ATC04_04860 3855eedb8009d118ff4a7fc844d41687 991 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 423 442 1.8E-33 T 11-10-2018 ATC04_04860 3855eedb8009d118ff4a7fc844d41687 991 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 119 4.0E-8 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_04860 3855eedb8009d118ff4a7fc844d41687 991 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 833 955 1.4E-28 T 11-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein ATC04_04860 3855eedb8009d118ff4a7fc844d41687 991 Pfam PF13244 Domain of unknown function (DUF4040) 615 679 7.4E-17 T 11-10-2018 IPR025383 Domain of unknown function DUF4040 ATC04_04860 3855eedb8009d118ff4a7fc844d41687 991 Pfam PF00361 Proton-conducting membrane transporter 135 425 2.2E-62 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_06585 4a28382b623b5742f1a16f28c4061c3d 236 Gene3D G3DSA:3.60.10.10 1 233 1.4E-48 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ATC04_06585 4a28382b623b5742f1a16f28c4061c3d 236 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 1 220 2.9E-8 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ATC04_06585 4a28382b623b5742f1a16f28c4061c3d 236 SUPERFAMILY SSF56219 4 224 1.57E-28 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ATC04_16000 b9c1c6d71dcf35a8cbd5ff3a6c8e50b7 167 SMART SM00852 8 150 1.1E-13 T 11-10-2018 IPR001453 MoaB/Mog domain ATC04_16000 b9c1c6d71dcf35a8cbd5ff3a6c8e50b7 167 Pfam PF00994 Probable molybdopterin binding domain 9 149 1.6E-27 T 11-10-2018 IPR001453 MoaB/Mog domain ATC04_16000 b9c1c6d71dcf35a8cbd5ff3a6c8e50b7 167 Gene3D G3DSA:3.40.980.10 1 159 6.9E-45 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ATC04_16000 b9c1c6d71dcf35a8cbd5ff3a6c8e50b7 167 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 66 79 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 ATC04_16000 b9c1c6d71dcf35a8cbd5ff3a6c8e50b7 167 SUPERFAMILY SSF53218 6 156 3.66E-36 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ATC04_14505 23d6afeeb5601641cb4db10cbd5fb0ea 147 SUPERFAMILY SSF55811 4 119 5.96E-27 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_14505 23d6afeeb5601641cb4db10cbd5fb0ea 147 Gene3D G3DSA:3.90.79.10 2 127 6.2E-29 T 11-10-2018 ATC04_14505 23d6afeeb5601641cb4db10cbd5fb0ea 147 Pfam PF00293 NUDIX domain 6 119 8.6E-19 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_14505 23d6afeeb5601641cb4db10cbd5fb0ea 147 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATC04_13585 4e64491340c16e1a362f47e4084881b4 285 Gene3D G3DSA:1.10.3720.10 43 284 6.3E-54 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_13585 4e64491340c16e1a362f47e4084881b4 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 274 7.9E-13 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_13585 4e64491340c16e1a362f47e4084881b4 285 SUPERFAMILY SSF161098 45 273 3.27E-51 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_07295 4a0acb8ad9095abb4494077ee777eaa1 127 Pfam PF11239 Protein of unknown function (DUF3040) 1 80 7.1E-24 T 11-10-2018 IPR021401 Protein of unknown function DUF3040 ATC04_00925 78b34da8af79853a2b0d277019bac054 166 Pfam PF01613 Flavin reductase like domain 18 160 1.1E-21 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ATC04_00925 78b34da8af79853a2b0d277019bac054 166 SUPERFAMILY SSF50475 8 160 2.01E-31 T 11-10-2018 ATC04_00925 78b34da8af79853a2b0d277019bac054 166 SMART SM00903 16 159 1.3E-35 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ATC04_00925 78b34da8af79853a2b0d277019bac054 166 Gene3D G3DSA:2.30.110.10 1 161 1.6E-34 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ATC04_15165 76723db6be026675eb9730889cf1a02a 451 Gene3D G3DSA:3.90.1150.10 28 443 1.0E-140 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_15165 76723db6be026675eb9730889cf1a02a 451 Gene3D G3DSA:3.40.640.10 83 344 1.0E-140 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_15165 76723db6be026675eb9730889cf1a02a 451 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 262 299 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_15165 76723db6be026675eb9730889cf1a02a 451 SUPERFAMILY SSF53383 47 446 7.11E-110 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_15165 76723db6be026675eb9730889cf1a02a 451 Pfam PF00202 Aminotransferase class-III 48 444 2.1E-114 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_15165 76723db6be026675eb9730889cf1a02a 451 PIRSF PIRSF000521 3 154 4.3E-7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_15165 76723db6be026675eb9730889cf1a02a 451 PIRSF PIRSF000521 127 449 1.2E-34 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATC04_13735 49e6e3be1038b5c033815c1ec0efd966 380 Gene3D G3DSA:3.30.420.40 186 344 8.4E-46 T 11-10-2018 ATC04_13735 49e6e3be1038b5c033815c1ec0efd966 380 Gene3D G3DSA:3.30.420.40 75 185 8.4E-46 T 11-10-2018 ATC04_13735 49e6e3be1038b5c033815c1ec0efd966 380 Pfam PF00480 ROK family 67 339 3.3E-30 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ATC04_13735 49e6e3be1038b5c033815c1ec0efd966 380 Gene3D G3DSA:1.10.10.10 1 59 5.6E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_13735 49e6e3be1038b5c033815c1ec0efd966 380 SUPERFAMILY SSF53067 66 349 1.18E-31 T 11-10-2018 ATC04_13735 49e6e3be1038b5c033815c1ec0efd966 380 SUPERFAMILY SSF46785 1 55 6.75E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_06080 59ba7bd6a8413c842617747b0c7903da 156 SUPERFAMILY SSF47973 1 149 1.31E-55 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily ATC04_06080 59ba7bd6a8413c842617747b0c7903da 156 PIRSF PIRSF002122 4 156 7.6E-54 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 ATC04_06080 59ba7bd6a8413c842617747b0c7903da 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.1E-64 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ATC04_06080 59ba7bd6a8413c842617747b0c7903da 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.293 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ATC04_06080 59ba7bd6a8413c842617747b0c7903da 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06080 59ba7bd6a8413c842617747b0c7903da 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.2E-59 T 11-10-2018 IPR023798 Ribosomal protein S7 domain ATC04_06080 59ba7bd6a8413c842617747b0c7903da 156 Gene3D G3DSA:1.10.455.10 2 156 1.9E-55 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily ATC04_14950 beaf8088dbb64358574bb24cad9c34e3 163 SUPERFAMILY SSF46689 1 45 3.99E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_14950 beaf8088dbb64358574bb24cad9c34e3 163 Gene3D G3DSA:1.10.357.10 1 161 1.2E-33 T 11-10-2018 ATC04_14950 beaf8088dbb64358574bb24cad9c34e3 163 SUPERFAMILY SSF48498 54 156 8.45E-13 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_05325 ca29774245be69b41af6f67edb5c25f7 375 Gene3D G3DSA:3.40.50.12780 38 251 7.8E-44 T 11-10-2018 ATC04_05325 ca29774245be69b41af6f67edb5c25f7 375 Pfam PF00501 AMP-binding enzyme 49 282 1.0E-31 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_05325 ca29774245be69b41af6f67edb5c25f7 375 ProSitePatterns PS00455 Putative AMP-binding domain signature. 54 65 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_05325 ca29774245be69b41af6f67edb5c25f7 375 SUPERFAMILY SSF56801 42 373 2.75E-59 T 11-10-2018 ATC04_05325 ca29774245be69b41af6f67edb5c25f7 375 Gene3D G3DSA:3.30.300.30 276 375 1.5E-10 T 11-10-2018 ATC04_02210 25865d7ac1890892a71b6185b73e80e9 421 Pfam PF07690 Major Facilitator Superfamily 33 349 2.4E-25 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_02210 25865d7ac1890892a71b6185b73e80e9 421 SUPERFAMILY SSF103473 22 412 8.89E-47 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_02210 25865d7ac1890892a71b6185b73e80e9 421 Gene3D G3DSA:1.20.1250.20 21 222 1.2E-19 T 11-10-2018 ATC04_02210 25865d7ac1890892a71b6185b73e80e9 421 Gene3D G3DSA:1.20.1250.20 223 408 1.3E-17 T 11-10-2018 ATC04_15830 a8c54b7b7fea0851338614c2e201c918 536 SUPERFAMILY SSF90123 19 300 8.76E-26 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_15830 a8c54b7b7fea0851338614c2e201c918 536 SUPERFAMILY SSF52540 387 493 5.16E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15830 a8c54b7b7fea0851338614c2e201c918 536 Gene3D G3DSA:3.40.50.300 368 515 5.9E-8 T 11-10-2018 ATC04_15830 a8c54b7b7fea0851338614c2e201c918 536 Gene3D G3DSA:1.20.1560.10 22 308 1.4E-20 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ATC04_17895 c100374fe82bfd2603406ecbf3b09727 343 Gene3D G3DSA:3.40.390.50 134 228 6.1E-7 T 11-10-2018 ATC04_17895 c100374fe82bfd2603406ecbf3b09727 343 SMART SM00530 6 61 1.9E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_17895 c100374fe82bfd2603406ecbf3b09727 343 Pfam PF01381 Helix-turn-helix 7 57 6.1E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_17895 c100374fe82bfd2603406ecbf3b09727 343 Pfam PF06114 IrrE N-terminal-like domain 149 265 4.0E-23 T 11-10-2018 IPR010359 IrrE N-terminal-like domain ATC04_17895 c100374fe82bfd2603406ecbf3b09727 343 SUPERFAMILY SSF47413 4 61 6.44E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_17895 c100374fe82bfd2603406ecbf3b09727 343 Gene3D G3DSA:1.10.260.40 4 69 2.9E-11 T 11-10-2018 ATC04_04170 634cf8e40bcc75b0f9e90ebf35477154 455 Gene3D G3DSA:3.30.565.10 315 445 7.5E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_04170 634cf8e40bcc75b0f9e90ebf35477154 455 SUPERFAMILY SSF55874 346 443 2.09E-8 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_04170 634cf8e40bcc75b0f9e90ebf35477154 455 SMART SM00387 352 449 0.0044 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ATC04_04170 634cf8e40bcc75b0f9e90ebf35477154 455 Pfam PF07730 Histidine kinase 233 298 2.6E-19 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ATC04_12610 1f4de1c62c524f6d38a38f81ca76b86f 368 SUPERFAMILY SSF53383 29 364 6.78E-74 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_12610 1f4de1c62c524f6d38a38f81ca76b86f 368 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 14 362 2.9E-93 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ATC04_12610 1f4de1c62c524f6d38a38f81ca76b86f 368 Gene3D G3DSA:3.90.1150.10 17 358 3.2E-119 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_12610 1f4de1c62c524f6d38a38f81ca76b86f 368 Pfam PF00155 Aminotransferase class I and II 32 360 1.9E-59 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATC04_12610 1f4de1c62c524f6d38a38f81ca76b86f 368 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 12 364 52.556 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ATC04_12610 1f4de1c62c524f6d38a38f81ca76b86f 368 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 227 236 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 ATC04_12610 1f4de1c62c524f6d38a38f81ca76b86f 368 Gene3D G3DSA:3.40.640.10 54 277 3.2E-119 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_10910 6aff9e34336e3b60535738970a5df351 417 Gene3D G3DSA:1.20.1250.20 4 405 6.7E-28 T 11-10-2018 ATC04_10910 6aff9e34336e3b60535738970a5df351 417 Pfam PF07690 Major Facilitator Superfamily 13 256 8.1E-12 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_10910 6aff9e34336e3b60535738970a5df351 417 SUPERFAMILY SSF103473 8 415 1.57E-37 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_13830 46e78f4bc48f12c79eda1f03aba46398 402 SMART SM00044 170 374 0.0075 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 ATC04_13830 46e78f4bc48f12c79eda1f03aba46398 402 Gene3D G3DSA:3.30.70.1230 225 392 2.2E-37 T 11-10-2018 IPR029787 Nucleotide cyclase ATC04_13830 46e78f4bc48f12c79eda1f03aba46398 402 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 238 388 1.6E-11 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 ATC04_13830 46e78f4bc48f12c79eda1f03aba46398 402 Pfam PF16701 Adenylate cyclase regulatory domain 69 201 1.5E-6 T 11-10-2018 IPR032026 Adenylate cyclase regulatory domain ATC04_13830 46e78f4bc48f12c79eda1f03aba46398 402 SUPERFAMILY SSF55073 236 394 1.11E-29 T 11-10-2018 IPR029787 Nucleotide cyclase ATC04_12615 c59886e101339af9cdadf6ffc0966197 117 Gene3D G3DSA:3.10.350.10 48 117 3.7E-11 T 11-10-2018 IPR036779 LysM domain superfamily ATC04_12615 c59886e101339af9cdadf6ffc0966197 117 SUPERFAMILY SSF54106 66 113 8.63E-6 T 11-10-2018 ATC04_12615 c59886e101339af9cdadf6ffc0966197 117 SMART SM00257 64 113 1.8E-4 T 11-10-2018 IPR018392 LysM domain ATC04_12615 c59886e101339af9cdadf6ffc0966197 117 Pfam PF01476 LysM domain 66 113 2.7E-9 T 11-10-2018 IPR018392 LysM domain ATC04_13605 cbf10d8760a9e17757166d00f91406d4 312 SUPERFAMILY SSF53067 4 305 3.29E-48 T 11-10-2018 ATC04_13605 cbf10d8760a9e17757166d00f91406d4 312 Pfam PF00480 ROK family 9 302 2.2E-46 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ATC04_13605 cbf10d8760a9e17757166d00f91406d4 312 Gene3D G3DSA:3.30.420.40 130 284 5.1E-68 T 11-10-2018 ATC04_13605 cbf10d8760a9e17757166d00f91406d4 312 Gene3D G3DSA:3.30.420.40 8 296 5.1E-68 T 11-10-2018 ATC04_10660 757067e57d4942ce89ec8e3269708ff1 370 Gene3D G3DSA:3.40.50.20 1 132 1.3E-38 T 11-10-2018 ATC04_10660 757067e57d4942ce89ec8e3269708ff1 370 SUPERFAMILY SSF56059 144 366 4.42E-57 T 11-10-2018 ATC04_10660 757067e57d4942ce89ec8e3269708ff1 370 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 111 122 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_10660 757067e57d4942ce89ec8e3269708ff1 370 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 305 333 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_10660 757067e57d4942ce89ec8e3269708ff1 370 Pfam PF01820 D-ala D-ala ligase N-terminus 7 134 1.2E-30 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_10660 757067e57d4942ce89ec8e3269708ff1 370 Gene3D G3DSA:3.30.1490.20 159 230 3.2E-75 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ATC04_10660 757067e57d4942ce89ec8e3269708ff1 370 Pfam PF07478 D-ala D-ala ligase C-terminus 152 359 8.8E-69 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_10660 757067e57d4942ce89ec8e3269708ff1 370 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 7 362 7.2E-107 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_10660 757067e57d4942ce89ec8e3269708ff1 370 SUPERFAMILY SSF52440 5 143 6.04E-34 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ATC04_10660 757067e57d4942ce89ec8e3269708ff1 370 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 6 363 40.101 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_10660 757067e57d4942ce89ec8e3269708ff1 370 PIRSF PIRSF039102 3 368 8.7E-111 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ATC04_10660 757067e57d4942ce89ec8e3269708ff1 370 Gene3D G3DSA:3.30.470.20 133 365 3.2E-75 T 11-10-2018 ATC04_09050 d16d7ecd0b7dddc34860552fbd695f4f 267 Gene3D G3DSA:1.10.10.10 2 59 1.5E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_09050 d16d7ecd0b7dddc34860552fbd695f4f 267 SUPERFAMILY SSF100950 82 239 9.21E-20 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_09050 d16d7ecd0b7dddc34860552fbd695f4f 267 SMART SM01134 79 239 1.5E-48 T 11-10-2018 ATC04_09050 d16d7ecd0b7dddc34860552fbd695f4f 267 SUPERFAMILY SSF46785 11 67 4.83E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_09050 d16d7ecd0b7dddc34860552fbd695f4f 267 ProSitePatterns PS00894 DeoR-type HTH domain signature. 12 46 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 ATC04_09050 d16d7ecd0b7dddc34860552fbd695f4f 267 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 30 44 2.7E-7 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ATC04_09050 d16d7ecd0b7dddc34860552fbd695f4f 267 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 44 62 2.7E-7 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ATC04_09050 d16d7ecd0b7dddc34860552fbd695f4f 267 Pfam PF08220 DeoR-like helix-turn-helix domain 12 65 1.9E-14 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ATC04_09050 d16d7ecd0b7dddc34860552fbd695f4f 267 SMART SM00420 12 64 3.3E-12 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ATC04_09050 d16d7ecd0b7dddc34860552fbd695f4f 267 Pfam PF00455 DeoR C terminal sensor domain 82 237 4.6E-40 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain ATC04_16155 2cecfb9473b6317d14d5fffa39ed44fc 234 SMART SM00014 105 218 2.5E-11 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATC04_16155 2cecfb9473b6317d14d5fffa39ed44fc 234 Pfam PF01569 PAP2 superfamily 106 223 4.8E-17 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATC04_16155 2cecfb9473b6317d14d5fffa39ed44fc 234 SUPERFAMILY SSF48317 25 231 1.96E-30 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ATC04_16155 2cecfb9473b6317d14d5fffa39ed44fc 234 Gene3D G3DSA:1.20.144.10 138 234 1.4E-20 T 11-10-2018 ATC04_13180 8678299b62f5bff3c951b225a6b84e6c 270 SUPERFAMILY SSF55729 132 266 5.22E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_13180 8678299b62f5bff3c951b225a6b84e6c 270 Pfam PF00583 Acetyltransferase (GNAT) family 188 259 1.2E-6 T 11-10-2018 IPR000182 GNAT domain ATC04_13180 8678299b62f5bff3c951b225a6b84e6c 270 Pfam PF13312 Domain of unknown function (DUF4081) 40 143 5.5E-25 T 11-10-2018 IPR025289 Domain of unknown function DUF4081 ATC04_13180 8678299b62f5bff3c951b225a6b84e6c 270 Gene3D G3DSA:3.40.630.30 70 268 5.4E-15 T 11-10-2018 ATC04_17595 cbf689b25d2d782a94f08b2ea15be1b7 273 Pfam PF11651 P22 coat protein - gene protein 5 7 192 1.0E-11 T 11-10-2018 IPR024659 Major capsid protein Gp5 ATC04_02340 9aa3441f5c5613fea53791e31d778759 218 Gene3D G3DSA:1.20.120.680 2 210 1.6E-26 T 11-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 ATC04_02340 9aa3441f5c5613fea53791e31d778759 218 SUPERFAMILY SSF101262 11 173 5.36E-21 T 11-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 ATC04_02340 9aa3441f5c5613fea53791e31d778759 218 Pfam PF04961 Formiminotransferase-cyclodeaminase 13 170 4.6E-22 T 11-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 ATC04_03770 a2032ff177dbc232906424781b20bf4d 135 SMART SM00226 4 132 9.6E-14 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ATC04_03770 a2032ff177dbc232906424781b20bf4d 135 Gene3D G3DSA:3.40.50.2300 4 131 1.3E-34 T 11-10-2018 ATC04_03770 a2032ff177dbc232906424781b20bf4d 135 SUPERFAMILY SSF52788 4 130 1.22E-22 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily ATC04_03770 a2032ff177dbc232906424781b20bf4d 135 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 128 1.4E-12 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ATC04_04810 79e08bf13511008b0df5415d43b03902 221 Gene3D G3DSA:1.10.3720.10 5 219 9.0E-54 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_04810 79e08bf13511008b0df5415d43b03902 221 SUPERFAMILY SSF161098 13 201 9.42E-45 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_04810 79e08bf13511008b0df5415d43b03902 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 216 2.3E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_04810 79e08bf13511008b0df5415d43b03902 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 110 1.9E-28 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ATC04_17220 0d9000c83906ffba3443496ad22059eb 445 TIGRFAM TIGR01679 bact_FAD_ox: FAD-linked oxidoreductase 17 443 3.5E-122 T 11-10-2018 ATC04_17220 0d9000c83906ffba3443496ad22059eb 445 Gene3D G3DSA:3.30.465.10 81 205 3.6E-38 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ATC04_17220 0d9000c83906ffba3443496ad22059eb 445 SUPERFAMILY SSF56176 11 192 1.31E-42 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ATC04_17220 0d9000c83906ffba3443496ad22059eb 445 Gene3D G3DSA:3.30.70.2520 314 406 9.1E-24 T 11-10-2018 ATC04_17220 0d9000c83906ffba3443496ad22059eb 445 Pfam PF04030 D-arabinono-1,4-lactone oxidase 186 441 1.2E-67 T 11-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 ATC04_17220 0d9000c83906ffba3443496ad22059eb 445 PIRSF PIRSF000136 8 445 1.6E-101 T 11-10-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 ATC04_17220 0d9000c83906ffba3443496ad22059eb 445 Pfam PF01565 FAD binding domain 34 161 9.7E-21 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ATC04_17220 0d9000c83906ffba3443496ad22059eb 445 Gene3D G3DSA:3.30.43.10 12 79 4.2E-14 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 ATC04_17220 0d9000c83906ffba3443496ad22059eb 445 Gene3D G3DSA:1.10.45.10 407 445 2.0E-11 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ATC04_08330 f7c5ba09a6234206b0720849e066cf40 460 Gene3D G3DSA:3.30.300.30 358 457 2.5E-12 T 11-10-2018 ATC04_08330 f7c5ba09a6234206b0720849e066cf40 460 ProSitePatterns PS00455 Putative AMP-binding domain signature. 122 133 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_08330 f7c5ba09a6234206b0720849e066cf40 460 Gene3D G3DSA:3.40.50.12780 1 354 2.7E-53 T 11-10-2018 ATC04_08330 f7c5ba09a6234206b0720849e066cf40 460 Pfam PF00501 AMP-binding enzyme 5 361 1.2E-41 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_08330 f7c5ba09a6234206b0720849e066cf40 460 SUPERFAMILY SSF56801 6 448 2.35E-74 T 11-10-2018 ATC04_04760 f58125db9d9b8210c6b39f53f6bce7a8 194 Pfam PF04234 CopC domain 31 126 7.1E-21 T 11-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 ATC04_04760 f58125db9d9b8210c6b39f53f6bce7a8 194 SUPERFAMILY SSF81296 30 126 5.13E-18 T 11-10-2018 IPR014756 Immunoglobulin E-set ATC04_04760 f58125db9d9b8210c6b39f53f6bce7a8 194 Gene3D G3DSA:2.60.40.1220 31 133 1.8E-22 T 11-10-2018 ATC04_15935 cf0359c882e6205a39a89cec4c32a7eb 419 Pfam PF03454 MoeA C-terminal region (domain IV) 350 415 2.2E-6 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15935 cf0359c882e6205a39a89cec4c32a7eb 419 SUPERFAMILY SSF63882 16 190 6.28E-42 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15935 cf0359c882e6205a39a89cec4c32a7eb 419 SUPERFAMILY SSF53218 193 338 6.02E-37 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ATC04_15935 cf0359c882e6205a39a89cec4c32a7eb 419 Gene3D G3DSA:3.90.105.10 46 190 5.3E-107 T 11-10-2018 ATC04_15935 cf0359c882e6205a39a89cec4c32a7eb 419 Pfam PF03453 MoeA N-terminal region (domain I and II) 17 183 1.8E-39 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15935 cf0359c882e6205a39a89cec4c32a7eb 419 Gene3D G3DSA:3.40.980.10 191 344 5.3E-107 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ATC04_15935 cf0359c882e6205a39a89cec4c32a7eb 419 Gene3D G3DSA:2.40.340.10 345 412 5.3E-107 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15935 cf0359c882e6205a39a89cec4c32a7eb 419 SUPERFAMILY SSF63867 343 418 1.83E-6 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATC04_15935 cf0359c882e6205a39a89cec4c32a7eb 419 Pfam PF00994 Probable molybdopterin binding domain 196 333 6.1E-24 T 11-10-2018 IPR001453 MoaB/Mog domain ATC04_15935 cf0359c882e6205a39a89cec4c32a7eb 419 Gene3D G3DSA:2.170.190.11 64 157 5.3E-107 T 11-10-2018 ATC04_15935 cf0359c882e6205a39a89cec4c32a7eb 419 SMART SM00852 196 334 1.3E-31 T 11-10-2018 IPR001453 MoaB/Mog domain ATC04_03075 697c6d670cb3bfdfe61cec1374981b82 85 Pfam PF10905 Protein of unknown function (DUF2695) 3 32 7.2E-9 T 11-10-2018 IPR024248 Protein of unknown function DUF2695 ATC04_05570 4d581c961ce8a153e58560c07b47984a 312 SUPERFAMILY SSF103481 220 293 2.09E-9 T 11-10-2018 ATC04_05570 4d581c961ce8a153e58560c07b47984a 312 TIGRFAM TIGR00688 rarD: protein RarD 16 268 7.9E-59 T 11-10-2018 IPR004626 RarD protein GO:0005887 ATC04_05570 4d581c961ce8a153e58560c07b47984a 312 SUPERFAMILY SSF103481 49 152 1.57E-10 T 11-10-2018 ATC04_05570 4d581c961ce8a153e58560c07b47984a 312 Pfam PF00892 EamA-like transporter family 16 151 1.6E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ATC04_02405 39a84c0802157edc96176823c06e2a18 88 SMART SM00959 52 88 0.0039 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 ATC04_02405 39a84c0802157edc96176823c06e2a18 88 SUPERFAMILY SSF68912 54 85 1.41E-5 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily ATC04_02405 39a84c0802157edc96176823c06e2a18 88 Pfam PF07498 Rho termination factor, N-terminal domain 57 85 3.7E-9 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 ATC04_03325 2fc238cfe4353a46f73046bb3da36eb4 214 Pfam PF01144 Coenzyme A transferase 6 180 1.8E-35 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_03325 2fc238cfe4353a46f73046bb3da36eb4 214 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 ATC04_03325 2fc238cfe4353a46f73046bb3da36eb4 214 SUPERFAMILY SSF100950 1 211 6.98E-71 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_03325 2fc238cfe4353a46f73046bb3da36eb4 214 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 2 207 2.3E-96 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 ATC04_03325 2fc238cfe4353a46f73046bb3da36eb4 214 SMART SM00882 5 201 6.0E-72 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ATC04_03325 2fc238cfe4353a46f73046bb3da36eb4 214 Gene3D G3DSA:3.40.1080.10 1 211 1.2E-94 T 11-10-2018 ATC04_14835 85309bb3a1170a48a24088c61b426e1f 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 190 0.0011 T 11-10-2018 ATC04_14835 85309bb3a1170a48a24088c61b426e1f 247 SUPERFAMILY SSF51735 4 243 1.31E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_14835 85309bb3a1170a48a24088c61b426e1f 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 6.5E-56 T 11-10-2018 ATC04_14835 85309bb3a1170a48a24088c61b426e1f 247 Gene3D G3DSA:3.40.50.720 1 246 5.2E-72 T 11-10-2018 ATC04_14835 85309bb3a1170a48a24088c61b426e1f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.5E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_14835 85309bb3a1170a48a24088c61b426e1f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 5.5E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_14835 85309bb3a1170a48a24088c61b426e1f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.5E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_14835 85309bb3a1170a48a24088c61b426e1f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.5E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_14835 85309bb3a1170a48a24088c61b426e1f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.5E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_14835 85309bb3a1170a48a24088c61b426e1f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 5.5E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_14835 85309bb3a1170a48a24088c61b426e1f 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_03265 1fdb532b111a32fc4664713f00464246 484 ProSitePatterns PS00218 Amino acid permeases signature. 50 80 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ATC04_03265 1fdb532b111a32fc4664713f00464246 484 PIRSF PIRSF006060 14 481 2.0E-61 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_03265 1fdb532b111a32fc4664713f00464246 484 Gene3D G3DSA:1.20.1740.10 17 472 4.1E-59 T 11-10-2018 ATC04_03265 1fdb532b111a32fc4664713f00464246 484 Pfam PF00324 Amino acid permease 26 460 2.3E-108 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ATC04_07020 7ce80d105f567dcbb617a97eb1a9ba10 480 SUPERFAMILY SSF55486 80 431 2.71E-105 T 11-10-2018 ATC04_07020 7ce80d105f567dcbb617a97eb1a9ba10 480 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 81 432 1.4E-108 T 11-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 ATC04_07020 7ce80d105f567dcbb617a97eb1a9ba10 480 Gene3D G3DSA:1.20.150.30 81 216 6.9E-7 T 11-10-2018 ATC04_07020 7ce80d105f567dcbb617a97eb1a9ba10 480 Pfam PF10103 Zincin-like metallopeptidase 81 428 1.2E-111 T 11-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 ATC04_08065 5d773ba4740b25bd2d495a0f9af723cf 356 Pfam PF03741 Integral membrane protein TerC family 79 279 3.3E-53 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 ATC04_08065 5d773ba4740b25bd2d495a0f9af723cf 356 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 18 327 7.0E-108 T 11-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 ATC04_15265 64689832c294ccb7561bb3d16e4d4717 341 SUPERFAMILY SSF51261 216 341 3.79E-48 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_15265 64689832c294ccb7561bb3d16e4d4717 341 Gene3D G3DSA:2.70.70.10 192 341 8.5E-43 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_15265 64689832c294ccb7561bb3d16e4d4717 341 Pfam PF01551 Peptidase family M23 243 337 3.2E-26 T 11-10-2018 IPR016047 Peptidase M23 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 Gene3D G3DSA:1.10.287.40 1 103 3.1E-21 T 11-10-2018 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 400 4.3E-23 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 SUPERFAMILY SSF46589 2 111 2.88E-24 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 105 3.4E-25 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 423 37.613 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 PIRSF PIRSF001529 1 425 3.4E-136 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 1.1E-27 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 1.1E-27 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 1.1E-27 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 1.1E-27 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 1.1E-27 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 2 418 2.1E-129 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 SUPERFAMILY SSF55681 131 419 6.97E-81 T 11-10-2018 ATC04_00310 68f3823744898ace73d90a9285d99c57 425 Gene3D G3DSA:3.30.930.10 104 425 2.9E-112 T 11-10-2018 ATC04_15940 fe29da81c8d4dd9897dd52a9251572b5 252 Gene3D G3DSA:3.40.50.300 16 250 3.9E-62 T 11-10-2018 ATC04_15940 fe29da81c8d4dd9897dd52a9251572b5 252 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_15940 fe29da81c8d4dd9897dd52a9251572b5 252 SMART SM00382 24 211 2.3E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_15940 fe29da81c8d4dd9897dd52a9251572b5 252 SUPERFAMILY SSF52540 14 236 5.46E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15940 fe29da81c8d4dd9897dd52a9251572b5 252 Pfam PF00005 ABC transporter 19 162 1.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_02290 ccf2923f1b5d3faf90ff5f325e2fa40e 522 Gene3D G3DSA:1.10.10.2840 381 511 6.0E-18 T 11-10-2018 ATC04_02290 ccf2923f1b5d3faf90ff5f325e2fa40e 522 Pfam PF13556 PucR C-terminal helix-turn-helix domain 450 504 6.4E-16 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ATC04_02290 ccf2923f1b5d3faf90ff5f325e2fa40e 522 Pfam PF07905 Purine catabolism regulatory protein-like family 25 122 3.1E-15 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain ATC04_07175 dcffac4174b72e42898159f1e1654e8b 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 467 3.9E-65 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ATC04_07175 dcffac4174b72e42898159f1e1654e8b 546 Gene3D G3DSA:3.90.76.10 55 208 3.7E-89 T 11-10-2018 ATC04_07175 dcffac4174b72e42898159f1e1654e8b 546 Gene3D G3DSA:3.10.105.10 286 519 3.7E-89 T 11-10-2018 ATC04_07175 dcffac4174b72e42898159f1e1654e8b 546 SUPERFAMILY SSF53850 45 539 1.14E-91 T 11-10-2018 ATC04_07175 dcffac4174b72e42898159f1e1654e8b 546 PIRSF PIRSF002741 2 540 1.1E-62 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ATC04_07175 dcffac4174b72e42898159f1e1654e8b 546 Gene3D G3DSA:3.40.190.10 209 529 3.7E-89 T 11-10-2018 ATC04_14775 d38035753633af82e043878f5d1b6abf 508 Gene3D G3DSA:2.60.40.420 375 507 1.5E-37 T 11-10-2018 IPR008972 Cupredoxin ATC04_14775 d38035753633af82e043878f5d1b6abf 508 SUPERFAMILY SSF49503 35 195 5.07E-32 T 11-10-2018 IPR008972 Cupredoxin ATC04_14775 d38035753633af82e043878f5d1b6abf 508 ProSitePatterns PS00080 Multicopper oxidases signature 2. 489 500 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 ATC04_14775 d38035753633af82e043878f5d1b6abf 508 SUPERFAMILY SSF49503 393 504 1.13E-34 T 11-10-2018 IPR008972 Cupredoxin ATC04_14775 d38035753633af82e043878f5d1b6abf 508 Pfam PF07732 Multicopper oxidase 73 178 3.6E-32 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 ATC04_14775 d38035753633af82e043878f5d1b6abf 508 Gene3D G3DSA:2.60.40.420 181 367 8.9E-23 T 11-10-2018 IPR008972 Cupredoxin ATC04_14775 d38035753633af82e043878f5d1b6abf 508 Gene3D G3DSA:2.60.40.420 41 177 1.0E-36 T 11-10-2018 IPR008972 Cupredoxin ATC04_14775 d38035753633af82e043878f5d1b6abf 508 Pfam PF07731 Multicopper oxidase 392 505 2.1E-28 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 ATC04_14775 d38035753633af82e043878f5d1b6abf 508 Pfam PF00394 Multicopper oxidase 186 331 1.0E-12 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 ATC04_14775 d38035753633af82e043878f5d1b6abf 508 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 4 29 5.1E-6 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ATC04_14775 d38035753633af82e043878f5d1b6abf 508 SUPERFAMILY SSF49503 180 350 6.34E-22 T 11-10-2018 IPR008972 Cupredoxin ATC04_12345 b6c2bb7dba86f669f8567fb3b3d950e0 309 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 9 295 44.843 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 ATC04_12345 b6c2bb7dba86f669f8567fb3b3d950e0 309 Gene3D G3DSA:3.20.20.60 2 299 1.4E-100 T 11-10-2018 ATC04_12345 b6c2bb7dba86f669f8567fb3b3d950e0 309 ProSitePatterns PS00161 Isocitrate lyase signature. 124 129 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 ATC04_12345 b6c2bb7dba86f669f8567fb3b3d950e0 309 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 12 294 1.9E-118 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 ATC04_12345 b6c2bb7dba86f669f8567fb3b3d950e0 309 Pfam PF13714 Phosphoenolpyruvate phosphomutase 16 257 4.2E-52 T 11-10-2018 ATC04_12345 b6c2bb7dba86f669f8567fb3b3d950e0 309 SUPERFAMILY SSF51621 8 295 2.42E-95 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ATC04_09775 f6b6579ebe24eb86b6bc65fcea43a197 326 SUPERFAMILY SSF53474 17 307 5.22E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_09775 f6b6579ebe24eb86b6bc65fcea43a197 326 PIRSF PIRSF006431 2 322 4.9E-89 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 ATC04_09775 f6b6579ebe24eb86b6bc65fcea43a197 326 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 11 309 4.4E-78 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 ATC04_09775 f6b6579ebe24eb86b6bc65fcea43a197 326 Gene3D G3DSA:3.40.50.1820 7 318 9.3E-74 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_09775 f6b6579ebe24eb86b6bc65fcea43a197 326 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 65 76 5.8E-11 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATC04_09775 f6b6579ebe24eb86b6bc65fcea43a197 326 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 38 46 5.8E-11 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATC04_09775 f6b6579ebe24eb86b6bc65fcea43a197 326 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 113 127 5.8E-11 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATC04_09775 f6b6579ebe24eb86b6bc65fcea43a197 326 Pfam PF00561 alpha/beta hydrolase fold 37 306 3.6E-22 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_15790 695218a3b3a44db6ca8cf72a399c9f20 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 5.4E-21 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ATC04_15790 695218a3b3a44db6ca8cf72a399c9f20 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 5.4E-21 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ATC04_15790 695218a3b3a44db6ca8cf72a399c9f20 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 5.4E-21 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ATC04_15790 695218a3b3a44db6ca8cf72a399c9f20 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 5.4E-21 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ATC04_15790 695218a3b3a44db6ca8cf72a399c9f20 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 291 305 5.4E-21 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ATC04_15790 695218a3b3a44db6ca8cf72a399c9f20 472 Gene3D G3DSA:3.20.20.80 3 472 4.5E-190 T 11-10-2018 ATC04_15790 695218a3b3a44db6ca8cf72a399c9f20 472 SUPERFAMILY SSF51445 11 469 1.09E-150 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ATC04_15790 695218a3b3a44db6ca8cf72a399c9f20 472 Pfam PF00232 Glycosyl hydrolase family 1 10 469 3.5E-151 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ATC04_15790 695218a3b3a44db6ca8cf72a399c9f20 472 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 11-10-2018 IPR018120 Glycoside hydrolase family 1, active site ATC04_15790 695218a3b3a44db6ca8cf72a399c9f20 472 TIGRFAM TIGR03356 BGL: beta-galactosidase 12 461 5.5E-163 T 11-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 ATC04_02755 fb1801b03728109680be1caa10e17c08 108 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 11 93 1.7E-17 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 ATC04_02755 fb1801b03728109680be1caa10e17c08 108 SUPERFAMILY SSF55248 7 95 5.49E-19 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 ATC04_02755 fb1801b03728109680be1caa10e17c08 108 Gene3D G3DSA:3.30.1360.20 7 101 3.0E-19 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 ATC04_03670 964074a9f77f0cbcc36be6ff59d059e7 87 SUPERFAMILY SSF48264 3 86 6.68E-17 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_03670 964074a9f77f0cbcc36be6ff59d059e7 87 PRINTS PR00359 B-class P450 signature 7 22 4.8E-8 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_03670 964074a9f77f0cbcc36be6ff59d059e7 87 PRINTS PR00359 B-class P450 signature 28 37 4.8E-8 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_03670 964074a9f77f0cbcc36be6ff59d059e7 87 PRINTS PR00359 B-class P450 signature 37 48 4.8E-8 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_03670 964074a9f77f0cbcc36be6ff59d059e7 87 Gene3D G3DSA:1.10.630.10 1 86 3.4E-20 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_03635 1ac70827aa757e0275f1ad5e84c23704 394 Gene3D G3DSA:1.20.1250.20 22 386 8.9E-39 T 11-10-2018 ATC04_03635 1ac70827aa757e0275f1ad5e84c23704 394 SUPERFAMILY SSF103473 23 387 7.46E-51 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_03635 1ac70827aa757e0275f1ad5e84c23704 394 Pfam PF07690 Major Facilitator Superfamily 26 347 1.6E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_02100 176643ff77c507c31e022c16f06b6133 282 Pfam PF05901 Excalibur calcium-binding domain 246 281 1.6E-14 T 11-10-2018 IPR008613 Excalibur calcium-binding domain ATC04_02100 176643ff77c507c31e022c16f06b6133 282 SMART SM00894 245 281 8.2E-20 T 11-10-2018 IPR008613 Excalibur calcium-binding domain ATC04_05195 79ff45d0ad640c0e78aa79c4a48979ec 195 Gene3D G3DSA:3.40.630.30 27 182 4.0E-11 T 11-10-2018 ATC04_05195 79ff45d0ad640c0e78aa79c4a48979ec 195 SUPERFAMILY SSF55729 48 172 5.41E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_03460 76b6ebf6fa222728640c04423c3f9e7a 445 ProSitePatterns PS00216 Sugar transport proteins signature 1. 306 322 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_03460 76b6ebf6fa222728640c04423c3f9e7a 445 Gene3D G3DSA:1.20.1250.20 24 445 1.1E-58 T 11-10-2018 ATC04_03460 76b6ebf6fa222728640c04423c3f9e7a 445 Pfam PF00083 Sugar (and other) transporter 32 242 8.3E-20 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_03460 76b6ebf6fa222728640c04423c3f9e7a 445 SUPERFAMILY SSF103473 1 441 1.02E-64 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_03460 76b6ebf6fa222728640c04423c3f9e7a 445 Pfam PF07690 Major Facilitator Superfamily 259 428 6.3E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_18075 048c4ae798ae878fa3cc2ceafbf50ba1 195 Gene3D G3DSA:1.10.357.10 2 195 4.6E-33 T 11-10-2018 ATC04_18075 048c4ae798ae878fa3cc2ceafbf50ba1 195 SUPERFAMILY SSF46689 12 71 3.9E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_18075 048c4ae798ae878fa3cc2ceafbf50ba1 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 62 3.8E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_18075 048c4ae798ae878fa3cc2ceafbf50ba1 195 SUPERFAMILY SSF48498 86 178 6.3E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ATC04_16625 69e938b63c8c395a5f1e742932c503d4 540 Pfam PF00005 ABC transporter 300 450 1.9E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_16625 69e938b63c8c395a5f1e742932c503d4 540 SUPERFAMILY SSF52540 10 259 3.8E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16625 69e938b63c8c395a5f1e742932c503d4 540 SMART SM00382 308 500 7.3E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_16625 69e938b63c8c395a5f1e742932c503d4 540 SMART SM00382 37 237 8.4E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_16625 69e938b63c8c395a5f1e742932c503d4 540 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 271 0.14 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_16625 69e938b63c8c395a5f1e742932c503d4 540 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 502 527 0.0025 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_16625 69e938b63c8c395a5f1e742932c503d4 540 SUPERFAMILY SSF52540 280 522 4.44E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16625 69e938b63c8c395a5f1e742932c503d4 540 ProSitePatterns PS00211 ABC transporters family signature. 423 437 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_16625 69e938b63c8c395a5f1e742932c503d4 540 Pfam PF00005 ABC transporter 29 188 1.4E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_16625 69e938b63c8c395a5f1e742932c503d4 540 Gene3D G3DSA:3.40.50.300 279 538 4.5E-76 T 11-10-2018 ATC04_16625 69e938b63c8c395a5f1e742932c503d4 540 Gene3D G3DSA:3.40.50.300 9 278 8.1E-81 T 11-10-2018 ATC04_14270 29665a112bec9a0bf4d869218889a697 221 SUPERFAMILY SSF46689 21 72 4.73E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_14270 29665a112bec9a0bf4d869218889a697 221 Gene3D G3DSA:1.10.357.10 21 216 2.4E-32 T 11-10-2018 ATC04_14270 29665a112bec9a0bf4d869218889a697 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 68 4.8E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_02080 672bf4f47480c59aadd4bcec0c803c8e 448 Gene3D G3DSA:3.30.465.10 356 439 9.8E-16 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ATC04_02080 672bf4f47480c59aadd4bcec0c803c8e 448 Pfam PF00571 CBS domain 290 336 0.0019 T 11-10-2018 IPR000644 CBS domain ATC04_02080 672bf4f47480c59aadd4bcec0c803c8e 448 Pfam PF00571 CBS domain 222 271 8.9E-5 T 11-10-2018 IPR000644 CBS domain ATC04_02080 672bf4f47480c59aadd4bcec0c803c8e 448 Pfam PF03471 Transporter associated domain 352 438 6.0E-18 T 11-10-2018 IPR005170 Transporter-associated domain ATC04_02080 672bf4f47480c59aadd4bcec0c803c8e 448 Pfam PF01595 Domain of unknown function DUF21 7 199 7.8E-39 T 11-10-2018 IPR002550 CNNM, transmembrane domain ATC04_02080 672bf4f47480c59aadd4bcec0c803c8e 448 SMART SM00116 225 274 3.5 T 11-10-2018 IPR000644 CBS domain ATC04_02080 672bf4f47480c59aadd4bcec0c803c8e 448 SMART SM00116 288 336 5.2 T 11-10-2018 IPR000644 CBS domain ATC04_02080 672bf4f47480c59aadd4bcec0c803c8e 448 SMART SM01091 351 440 7.1E-21 T 11-10-2018 IPR005170 Transporter-associated domain ATC04_02080 672bf4f47480c59aadd4bcec0c803c8e 448 SUPERFAMILY SSF56176 350 444 9.82E-16 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ATC04_02080 672bf4f47480c59aadd4bcec0c803c8e 448 SUPERFAMILY SSF54631 213 354 6.44E-23 T 11-10-2018 ATC04_02080 672bf4f47480c59aadd4bcec0c803c8e 448 Gene3D G3DSA:3.10.580.10 197 347 5.1E-38 T 11-10-2018 ATC04_17890 5f38fa4c0d9e13555194fa82d4e04894 188 Pfam PF02796 Helix-turn-helix domain of resolvase 140 183 1.1E-11 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 ATC04_17890 5f38fa4c0d9e13555194fa82d4e04894 188 Gene3D G3DSA:1.10.10.60 143 185 3.2E-7 T 11-10-2018 ATC04_17890 5f38fa4c0d9e13555194fa82d4e04894 188 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_17890 5f38fa4c0d9e13555194fa82d4e04894 188 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_17890 5f38fa4c0d9e13555194fa82d4e04894 188 Pfam PF00239 Resolvase, N terminal domain 5 137 3.2E-45 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_17890 5f38fa4c0d9e13555194fa82d4e04894 188 Gene3D G3DSA:3.40.50.1390 4 127 2.9E-48 T 11-10-2018 ATC04_17890 5f38fa4c0d9e13555194fa82d4e04894 188 SMART SM00857 4 138 5.6E-59 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_17890 5f38fa4c0d9e13555194fa82d4e04894 188 SUPERFAMILY SSF53041 5 137 1.83E-45 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ATC04_17890 5f38fa4c0d9e13555194fa82d4e04894 188 SUPERFAMILY SSF46689 140 183 1.79E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_06745 4779d80df159c9b91c4ee6f5558a7272 265 SUPERFAMILY SSF110399 6 243 9.68E-75 T 11-10-2018 ATC04_06745 4779d80df159c9b91c4ee6f5558a7272 265 Gene3D G3DSA:3.20.20.70 1 258 9.1E-103 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_06745 4779d80df159c9b91c4ee6f5558a7272 265 Pfam PF05690 Thiazole biosynthesis protein ThiG 10 252 7.6E-98 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 ATC04_06745 4779d80df159c9b91c4ee6f5558a7272 265 Hamap MF_00443 Thiazole synthase [thiG]. 7 258 39.333 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 ATC04_14330 4e8211ea1eef23c3160e0cfe8ee50ad9 423 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 28 411 2.8E-139 T 11-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ATC04_14330 4e8211ea1eef23c3160e0cfe8ee50ad9 423 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 317 1.6E-85 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ATC04_14330 4e8211ea1eef23c3160e0cfe8ee50ad9 423 SUPERFAMILY SSF55021 341 403 9.7E-8 T 11-10-2018 ATC04_14330 4e8211ea1eef23c3160e0cfe8ee50ad9 423 Gene3D G3DSA:3.40.50.1100 14 321 7.2E-118 T 11-10-2018 ATC04_14330 4e8211ea1eef23c3160e0cfe8ee50ad9 423 Pfam PF01842 ACT domain 341 391 3.5E-7 T 11-10-2018 IPR002912 ACT domain ATC04_14330 4e8211ea1eef23c3160e0cfe8ee50ad9 423 SUPERFAMILY SSF53686 10 324 3.01E-99 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATC04_14330 4e8211ea1eef23c3160e0cfe8ee50ad9 423 Gene3D G3DSA:3.40.50.1100 57 153 7.2E-118 T 11-10-2018 ATC04_14330 4e8211ea1eef23c3160e0cfe8ee50ad9 423 Gene3D G3DSA:3.30.70.260 340 409 2.3E-7 T 11-10-2018 ATC04_16600 c3d844190ccabdca6596eb404ab73728 134 SUPERFAMILY SSF54593 5 131 2.4E-19 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_16600 c3d844190ccabdca6596eb404ab73728 134 Gene3D G3DSA:3.10.180.10 1 133 2.3E-39 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_11090 cae7b273a465bcb309588c2ffa722f91 286 Pfam PF01040 UbiA prenyltransferase family 19 267 7.0E-31 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 ATC04_01600 eec62fc82734d7f523b5301277193fff 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 299 1.6E-41 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_01600 eec62fc82734d7f523b5301277193fff 301 SUPERFAMILY SSF161098 75 284 2.75E-20 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_01600 eec62fc82734d7f523b5301277193fff 301 Gene3D G3DSA:1.10.3720.10 71 294 1.7E-23 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_15185 b08f5ea2c91ff8044ca8ab6f4fc38c1c 187 SMART SM00530 18 73 1.7E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_15185 b08f5ea2c91ff8044ca8ab6f4fc38c1c 187 SUPERFAMILY SSF51182 58 184 4.02E-21 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ATC04_15185 b08f5ea2c91ff8044ca8ab6f4fc38c1c 187 Gene3D G3DSA:1.10.260.40 11 76 4.4E-16 T 11-10-2018 ATC04_15185 b08f5ea2c91ff8044ca8ab6f4fc38c1c 187 SUPERFAMILY SSF47413 13 78 9.01E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_15185 b08f5ea2c91ff8044ca8ab6f4fc38c1c 187 Gene3D G3DSA:2.60.120.10 77 186 9.4E-15 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_15185 b08f5ea2c91ff8044ca8ab6f4fc38c1c 187 Pfam PF07883 Cupin domain 117 184 1.1E-10 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ATC04_15185 b08f5ea2c91ff8044ca8ab6f4fc38c1c 187 Pfam PF01381 Helix-turn-helix 20 70 2.6E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_02235 b62c33b7e0f5ac0f3436748ef9809ad9 97 Pfam PF01527 Transposase 1 81 3.3E-15 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATC04_02235 b62c33b7e0f5ac0f3436748ef9809ad9 97 SUPERFAMILY SSF46689 3 93 1.97E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_02235 b62c33b7e0f5ac0f3436748ef9809ad9 97 Gene3D G3DSA:1.10.10.60 8 95 7.8E-16 T 11-10-2018 ATC04_10795 b62c33b7e0f5ac0f3436748ef9809ad9 97 Pfam PF01527 Transposase 1 81 3.3E-15 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATC04_10795 b62c33b7e0f5ac0f3436748ef9809ad9 97 SUPERFAMILY SSF46689 3 93 1.97E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_10795 b62c33b7e0f5ac0f3436748ef9809ad9 97 Gene3D G3DSA:1.10.10.60 8 95 7.8E-16 T 11-10-2018 ATC04_02480 66e02670fd45310e08ebbd8218a74690 124 Pfam PF03965 Penicillinase repressor 8 116 1.6E-22 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 ATC04_02480 66e02670fd45310e08ebbd8218a74690 124 Gene3D G3DSA:1.10.10.10 3 71 1.4E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_02480 66e02670fd45310e08ebbd8218a74690 124 SUPERFAMILY SSF46785 6 116 1.56E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_17880 45edbb66d8f6b35d9a64bf9841160572 180 Pfam PF08281 Sigma-70, region 4 130 174 2.2E-10 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATC04_17880 45edbb66d8f6b35d9a64bf9841160572 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 177 1.0E-24 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ATC04_17880 45edbb66d8f6b35d9a64bf9841160572 180 SUPERFAMILY SSF88659 120 178 3.55E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ATC04_17880 45edbb66d8f6b35d9a64bf9841160572 180 Pfam PF04542 Sigma-70 region 2 24 90 1.2E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_17880 45edbb66d8f6b35d9a64bf9841160572 180 Gene3D G3DSA:1.10.1740.10 2 112 1.9E-26 T 11-10-2018 ATC04_17880 45edbb66d8f6b35d9a64bf9841160572 180 SUPERFAMILY SSF88946 2 102 4.32E-27 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ATC04_17880 45edbb66d8f6b35d9a64bf9841160572 180 Gene3D G3DSA:1.10.10.10 119 179 1.2E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_06245 cc397a88a95a99ccbf352b81224bf3d9 133 Pfam PF00411 Ribosomal protein S11 23 132 3.9E-45 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ATC04_06245 cc397a88a95a99ccbf352b81224bf3d9 133 SUPERFAMILY SSF53137 18 133 6.98E-46 T 11-10-2018 ATC04_06245 cc397a88a95a99ccbf352b81224bf3d9 133 Gene3D G3DSA:3.30.420.80 6 133 1.1E-52 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 ATC04_06245 cc397a88a95a99ccbf352b81224bf3d9 133 PIRSF PIRSF002131 3 133 2.7E-51 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ATC04_06245 cc397a88a95a99ccbf352b81224bf3d9 133 ProSitePatterns PS00054 Ribosomal protein S11 signature. 101 123 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site ATC04_06245 cc397a88a95a99ccbf352b81224bf3d9 133 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 4 133 32.162 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ATC04_06245 cc397a88a95a99ccbf352b81224bf3d9 133 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 14 130 1.6E-55 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_13010 c9f5e79f8359326c8d4769c1cf946d8f 365 SUPERFAMILY SSF53383 9 364 4.77E-87 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_13010 c9f5e79f8359326c8d4769c1cf946d8f 365 Pfam PF00266 Aminotransferase class-V 32 328 3.6E-27 T 11-10-2018 IPR000192 Aminotransferase class V domain ATC04_13010 c9f5e79f8359326c8d4769c1cf946d8f 365 Gene3D G3DSA:3.40.640.10 19 260 6.0E-122 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_13010 c9f5e79f8359326c8d4769c1cf946d8f 365 PIRSF PIRSF000524 1 365 4.6E-98 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 ATC04_13010 c9f5e79f8359326c8d4769c1cf946d8f 365 Gene3D G3DSA:3.90.1150.10 7 362 6.0E-122 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_06525 b1fc1498cb04c1a31a8299b94bf94a7a 365 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 36 319 37.027 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ATC04_06525 b1fc1498cb04c1a31a8299b94bf94a7a 365 Gene3D G3DSA:3.40.1010.20 132 228 1.4E-109 T 11-10-2018 ATC04_06525 b1fc1498cb04c1a31a8299b94bf94a7a 365 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 37 316 3.5E-98 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ATC04_06525 b1fc1498cb04c1a31a8299b94bf94a7a 365 Pfam PF02401 LytB protein 38 315 9.5E-90 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ATC04_06525 b1fc1498cb04c1a31a8299b94bf94a7a 365 Gene3D G3DSA:3.40.50.11270 47 131 1.4E-109 T 11-10-2018 ATC04_06525 b1fc1498cb04c1a31a8299b94bf94a7a 365 Gene3D G3DSA:3.40.1010.20 42 314 1.4E-109 T 11-10-2018 ATC04_10700 d127e7c558f784aab4b1937b6c6fbceb 547 Pfam PF01926 50S ribosome-binding GTPase 59 181 8.7E-8 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ATC04_10700 d127e7c558f784aab4b1937b6c6fbceb 547 SUPERFAMILY SSF52540 49 256 1.08E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16540 b104a091c891dcd56d98f4e5599b0776 350 Pfam PF00296 Luciferase-like monooxygenase 20 301 5.9E-45 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ATC04_16540 b104a091c891dcd56d98f4e5599b0776 350 Gene3D G3DSA:3.20.20.30 1 348 2.1E-76 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_16540 b104a091c891dcd56d98f4e5599b0776 350 SUPERFAMILY SSF51679 4 339 4.71E-71 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_16540 b104a091c891dcd56d98f4e5599b0776 350 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 5 338 2.8E-149 T 11-10-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative ATC04_07230 8c595848c363f184522fb68a4cea05af 353 Pfam PF06224 Winged helix DNA-binding domain 6 345 3.2E-68 T 11-10-2018 IPR009351 Protein of unknown function DUF1006 ATC04_08510 0a76fa4e4962b62e7fa41643f6a75ecc 237 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 30 236 2.8E-54 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ATC04_08510 0a76fa4e4962b62e7fa41643f6a75ecc 237 SUPERFAMILY SSF52402 28 201 1.2E-38 T 11-10-2018 ATC04_08510 0a76fa4e4962b62e7fa41643f6a75ecc 237 Gene3D G3DSA:3.40.50.620 11 237 1.1E-60 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_08510 0a76fa4e4962b62e7fa41643f6a75ecc 237 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 47 213 7.2E-39 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 ATC04_08510 0a76fa4e4962b62e7fa41643f6a75ecc 237 PIRSF PIRSF000857 4 237 9.9E-82 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ATC04_04360 35658d7c558d86f4cb1c834f7a65bc13 79 SUPERFAMILY SSF58113 4 68 1.29E-6 T 11-10-2018 ATC04_04360 35658d7c558d86f4cb1c834f7a65bc13 79 Gene3D G3DSA:1.20.120.20 2 79 1.3E-8 T 11-10-2018 ATC04_12705 37e418f03a2dfe853baffeee19bee211 277 SMART SM00382 27 214 1.2E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_12705 37e418f03a2dfe853baffeee19bee211 277 Pfam PF00005 ABC transporter 19 163 7.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_12705 37e418f03a2dfe853baffeee19bee211 277 Gene3D G3DSA:3.40.50.300 1 270 2.8E-72 T 11-10-2018 ATC04_12705 37e418f03a2dfe853baffeee19bee211 277 SUPERFAMILY SSF52540 1 239 5.05E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12705 37e418f03a2dfe853baffeee19bee211 277 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_03865 0dad3ebdacf9df9872a3b25796fe9866 298 Pfam PF00294 pfkB family carbohydrate kinase 5 292 2.4E-52 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ATC04_03865 0dad3ebdacf9df9872a3b25796fe9866 298 PRINTS PR00990 Ribokinase signature 35 54 5.7E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ATC04_03865 0dad3ebdacf9df9872a3b25796fe9866 298 PRINTS PR00990 Ribokinase signature 216 227 5.7E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ATC04_03865 0dad3ebdacf9df9872a3b25796fe9866 298 PRINTS PR00990 Ribokinase signature 106 119 5.7E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ATC04_03865 0dad3ebdacf9df9872a3b25796fe9866 298 PRINTS PR00990 Ribokinase signature 8 29 5.7E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ATC04_03865 0dad3ebdacf9df9872a3b25796fe9866 298 PRINTS PR00990 Ribokinase signature 168 183 5.7E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ATC04_03865 0dad3ebdacf9df9872a3b25796fe9866 298 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ATC04_03865 0dad3ebdacf9df9872a3b25796fe9866 298 Hamap MF_01987 Ribokinase [rbsK]. 4 298 22.445 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 ATC04_03865 0dad3ebdacf9df9872a3b25796fe9866 298 SUPERFAMILY SSF53613 1 293 1.42E-61 T 11-10-2018 IPR029056 Ribokinase-like ATC04_03865 0dad3ebdacf9df9872a3b25796fe9866 298 Gene3D G3DSA:3.40.1190.20 1 297 2.9E-79 T 11-10-2018 IPR029056 Ribokinase-like ATC04_01510 f814a3fb846fea28ed2a0ac1031aa09c 261 SMART SM00893 23 214 2.0E-36 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_01510 f814a3fb846fea28ed2a0ac1031aa09c 261 Pfam PF01012 Electron transfer flavoprotein domain 26 209 9.2E-32 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_01510 f814a3fb846fea28ed2a0ac1031aa09c 261 Gene3D G3DSA:3.40.50.620 1 256 1.4E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_01510 f814a3fb846fea28ed2a0ac1031aa09c 261 SUPERFAMILY SSF52402 1 252 1.78E-55 T 11-10-2018 ATC04_01510 f814a3fb846fea28ed2a0ac1031aa09c 261 PIRSF PIRSF000090 1 259 1.5E-59 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 ATC04_13695 00b55255622e243775d32a9c9557da54 202 Gene3D G3DSA:3.40.630.30 2 200 2.1E-41 T 11-10-2018 ATC04_13695 00b55255622e243775d32a9c9557da54 202 SUPERFAMILY SSF55729 5 184 5.76E-30 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_13695 00b55255622e243775d32a9c9557da54 202 Pfam PF13302 Acetyltransferase (GNAT) domain 14 158 5.6E-14 T 11-10-2018 IPR000182 GNAT domain ATC04_14460 a8a91bf420f2ca2f1ad90dcc07881f36 710 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 30 514 6.5E-172 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ATC04_14460 a8a91bf420f2ca2f1ad90dcc07881f36 710 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 68 515 7.2E-158 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ATC04_14460 a8a91bf420f2ca2f1ad90dcc07881f36 710 ProSitePatterns PS01303 BCCT family of transporters signature. 331 340 - T 11-10-2018 IPR018093 BCCT transporter, conserved site ATC04_12040 8dee5354f93faaf830d22c6e03b3beb9 139 Pfam PF07811 TadE-like protein 22 63 4.4E-9 T 11-10-2018 IPR012495 TadE-like ATC04_11675 caec8fe897138a290044450f2bf795ca 307 Hamap MF_00258 Glutamate racemase [murI]. 17 272 35.831 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATC04_11675 caec8fe897138a290044450f2bf795ca 307 SUPERFAMILY SSF53681 126 279 1.8E-39 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATC04_11675 caec8fe897138a290044450f2bf795ca 307 SUPERFAMILY SSF53681 18 123 1.11E-30 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATC04_11675 caec8fe897138a290044450f2bf795ca 307 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 83 91 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATC04_11675 caec8fe897138a290044450f2bf795ca 307 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 196 206 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATC04_11675 caec8fe897138a290044450f2bf795ca 307 Gene3D G3DSA:3.40.50.1860 112 223 4.5E-89 T 11-10-2018 ATC04_11675 caec8fe897138a290044450f2bf795ca 307 Gene3D G3DSA:3.40.50.1860 18 270 4.5E-89 T 11-10-2018 ATC04_11675 caec8fe897138a290044450f2bf795ca 307 TIGRFAM TIGR00067 glut_race: glutamate racemase 19 267 1.6E-65 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATC04_11675 caec8fe897138a290044450f2bf795ca 307 Pfam PF01177 Asp/Glu/Hydantoin racemase 19 230 3.2E-33 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATC04_02030 b1380ab64f89499efcac012bbb9caf84 250 Pfam PF04266 ASCH domain 120 214 2.9E-16 T 11-10-2018 IPR007374 ASCH domain ATC04_02030 b1380ab64f89499efcac012bbb9caf84 250 Gene3D G3DSA:3.10.400.10 84 227 2.9E-40 T 11-10-2018 ATC04_02030 b1380ab64f89499efcac012bbb9caf84 250 SUPERFAMILY SSF88697 86 223 3.98E-34 T 11-10-2018 IPR015947 PUA-like superfamily ATC04_02030 b1380ab64f89499efcac012bbb9caf84 250 SMART SM01022 113 234 1.9E-22 T 11-10-2018 IPR007374 ASCH domain ATC04_01665 b206efb488f4856bc7c5af4d0490bb4f 434 Pfam PF00355 Rieske [2Fe-2S] domain 62 146 5.4E-16 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATC04_01665 b206efb488f4856bc7c5af4d0490bb4f 434 SUPERFAMILY SSF50022 38 174 8.25E-43 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ATC04_01665 b206efb488f4856bc7c5af4d0490bb4f 434 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 47 72 1.8E-21 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ATC04_01665 b206efb488f4856bc7c5af4d0490bb4f 434 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 77 92 1.8E-21 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ATC04_01665 b206efb488f4856bc7c5af4d0490bb4f 434 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 159 185 1.8E-21 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ATC04_01665 b206efb488f4856bc7c5af4d0490bb4f 434 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 119 139 1.8E-21 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ATC04_01665 b206efb488f4856bc7c5af4d0490bb4f 434 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 98 118 1.8E-21 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ATC04_01665 b206efb488f4856bc7c5af4d0490bb4f 434 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 197 219 1.8E-21 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ATC04_01665 b206efb488f4856bc7c5af4d0490bb4f 434 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 198 431 2.2E-44 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 ATC04_01665 b206efb488f4856bc7c5af4d0490bb4f 434 SUPERFAMILY SSF55961 179 433 1.1E-40 T 11-10-2018 ATC04_01665 b206efb488f4856bc7c5af4d0490bb4f 434 Gene3D G3DSA:3.90.380.10 34 426 1.3E-139 T 11-10-2018 ATC04_01665 b206efb488f4856bc7c5af4d0490bb4f 434 Gene3D G3DSA:2.102.10.10 60 180 1.3E-139 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ATC04_00620 e02cc4aad1734202e0e024726c84af58 198 Pfam PF12089 Transmembrane domain of unknown function (DUF3566) 81 197 4.7E-36 T 11-10-2018 IPR021949 Domain of unknown function DUF3566. transmembrane ATC04_10615 f07dcd2ab3820782ce53cc4bf35fc188 299 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 6 271 3.2E-103 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 ATC04_10615 f07dcd2ab3820782ce53cc4bf35fc188 299 Gene3D G3DSA:3.90.550.10 1 299 2.5E-86 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_10615 f07dcd2ab3820782ce53cc4bf35fc188 299 SUPERFAMILY SSF53448 3 275 6.05E-62 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_10615 f07dcd2ab3820782ce53cc4bf35fc188 299 Pfam PF00483 Nucleotidyl transferase 8 273 9.7E-27 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ATC04_12895 3e992b611a92ab9f65798d8e4e5a4ede 397 Gene3D G3DSA:1.20.1250.20 197 383 2.8E-10 T 11-10-2018 ATC04_12895 3e992b611a92ab9f65798d8e4e5a4ede 397 Gene3D G3DSA:1.20.1250.20 1 185 5.0E-9 T 11-10-2018 ATC04_12895 3e992b611a92ab9f65798d8e4e5a4ede 397 Pfam PF07690 Major Facilitator Superfamily 18 342 1.7E-14 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_12895 3e992b611a92ab9f65798d8e4e5a4ede 397 SUPERFAMILY SSF103473 4 377 7.19E-28 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_08070 50efde02efd37c73febc5c56e52a7a1c 150 SUPERFAMILY SSF46785 25 144 4.14E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_08070 50efde02efd37c73febc5c56e52a7a1c 150 Gene3D G3DSA:1.10.10.10 12 145 1.6E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_08070 50efde02efd37c73febc5c56e52a7a1c 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site ATC04_08070 50efde02efd37c73febc5c56e52a7a1c 150 SMART SM00347 27 124 2.1E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_08070 50efde02efd37c73febc5c56e52a7a1c 150 Pfam PF01047 MarR family 36 91 2.1E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_13705 5d3a50d907dc001d0b769b4e35e5c023 393 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 224 2.3E-10 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 ATC04_13705 5d3a50d907dc001d0b769b4e35e5c023 393 Gene3D G3DSA:3.40.50.720 1 122 5.4E-25 T 11-10-2018 ATC04_13705 5d3a50d907dc001d0b769b4e35e5c023 393 SUPERFAMILY SSF51735 3 150 1.69E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_13705 5d3a50d907dc001d0b769b4e35e5c023 393 Gene3D G3DSA:3.30.360.10 123 372 6.8E-40 T 11-10-2018 ATC04_13705 5d3a50d907dc001d0b769b4e35e5c023 393 SUPERFAMILY SSF55347 127 300 8.67E-26 T 11-10-2018 ATC04_13705 5d3a50d907dc001d0b769b4e35e5c023 393 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 121 2.0E-17 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ATC04_05055 df1bf4a65b59baa3f4f7846056eb4353 126 SUPERFAMILY SSF55718 67 111 5.42E-5 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily ATC04_05055 df1bf4a65b59baa3f4f7846056eb4353 126 Gene3D G3DSA:3.30.1050.40 2 126 1.9E-44 T 11-10-2018 ATC04_04530 db06059034f64a172ebcdfa8a4f7adf3 326 Gene3D G3DSA:3.40.50.1980 37 210 1.9E-38 T 11-10-2018 ATC04_04530 db06059034f64a172ebcdfa8a4f7adf3 326 Pfam PF01297 Zinc-uptake complex component A periplasmic 38 323 2.7E-44 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 ATC04_04530 db06059034f64a172ebcdfa8a4f7adf3 326 SUPERFAMILY SSF53807 18 325 7.85E-55 T 11-10-2018 ATC04_13790 f3fa685057fe9c714e31e012f20bd874 436 Gene3D G3DSA:3.20.20.300 1 304 8.2E-97 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 ATC04_13790 f3fa685057fe9c714e31e012f20bd874 436 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 2 287 2.0E-70 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATC04_13790 f3fa685057fe9c714e31e012f20bd874 436 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 207 224 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 ATC04_13790 f3fa685057fe9c714e31e012f20bd874 436 SUPERFAMILY SSF51445 5 298 1.05E-71 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ATC04_13615 06001d44eab596fc5e73281d783e9c1c 165 Pfam PF08534 Redoxin 20 161 7.4E-25 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 ATC04_13615 06001d44eab596fc5e73281d783e9c1c 165 Gene3D G3DSA:3.40.30.10 2 165 2.8E-43 T 11-10-2018 ATC04_13615 06001d44eab596fc5e73281d783e9c1c 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 11-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 ATC04_13615 06001d44eab596fc5e73281d783e9c1c 165 SUPERFAMILY SSF52833 1 162 3.94E-43 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_13615 06001d44eab596fc5e73281d783e9c1c 165 Hamap MF_00269 Thiol peroxidase [tpx]. 3 165 37.338 T 11-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 ATC04_16370 a181924513a02b517a5f631232da9174 545 ProSitePatterns PS00510 Malate synthase signature. 270 285 - T 11-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ATC04_16370 a181924513a02b517a5f631232da9174 545 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 23 530 2.8E-213 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ATC04_16370 a181924513a02b517a5f631232da9174 545 SUPERFAMILY SSF51645 11 533 3.92E-167 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ATC04_16370 a181924513a02b517a5f631232da9174 545 Gene3D G3DSA:1.20.1220.12 419 532 3.2E-41 T 11-10-2018 ATC04_16370 a181924513a02b517a5f631232da9174 545 Pfam PF01274 Malate synthase 12 530 8.8E-183 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ATC04_16370 a181924513a02b517a5f631232da9174 545 PIRSF PIRSF001363 1 534 8.3E-224 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ATC04_16370 a181924513a02b517a5f631232da9174 545 Gene3D G3DSA:3.20.20.360 5 415 1.4E-175 T 11-10-2018 ATC04_09185 6593397640eddb3f4bfef017863e0c4b 467 Gene3D G3DSA:1.10.8.60 184 254 1.2E-11 T 11-10-2018 ATC04_09185 6593397640eddb3f4bfef017863e0c4b 467 Gene3D G3DSA:1.20.272.10 263 366 8.5E-46 T 11-10-2018 ATC04_09185 6593397640eddb3f4bfef017863e0c4b 467 SMART SM00382 67 184 9.7E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_09185 6593397640eddb3f4bfef017863e0c4b 467 SUPERFAMILY SSF52540 22 262 4.22E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09185 6593397640eddb3f4bfef017863e0c4b 467 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 71 175 2.1E-15 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ATC04_09185 6593397640eddb3f4bfef017863e0c4b 467 SUPERFAMILY SSF48019 274 457 9.35E-74 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ATC04_09185 6593397640eddb3f4bfef017863e0c4b 467 Pfam PF12002 MgsA AAA+ ATPase C terminal 289 454 2.7E-69 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal ATC04_09185 6593397640eddb3f4bfef017863e0c4b 467 Gene3D G3DSA:1.10.3710.10 367 467 5.7E-27 T 11-10-2018 ATC04_09185 6593397640eddb3f4bfef017863e0c4b 467 Pfam PF16193 AAA C-terminal domain 206 288 3.7E-23 T 11-10-2018 IPR032423 AAA C-terminal domain ATC04_09185 6593397640eddb3f4bfef017863e0c4b 467 Gene3D G3DSA:3.40.50.300 21 182 3.5E-37 T 11-10-2018 ATC04_05880 d1340c19f22f5dc5ac4240b4458ac5fd 202 Pfam PF10977 Protein of unknown function (DUF2797) 3 168 1.0E-7 T 11-10-2018 IPR021246 Protein of unknown function DUF2797 ATC04_10095 e74a6ed3d5bff0ac2eecc2e3792a6f33 347 Pfam PF06224 Winged helix DNA-binding domain 32 315 2.3E-45 T 11-10-2018 IPR009351 Protein of unknown function DUF1006 ATC04_11685 24223013140a640edd310a1e77d6da42 94 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 9 94 16.188 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS ATC04_11685 24223013140a640edd310a1e77d6da42 94 Gene3D G3DSA:3.30.1390.10 2 93 6.7E-16 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ATC04_11685 24223013140a640edd310a1e77d6da42 94 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 18 88 4.3E-19 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 ATC04_11685 24223013140a640edd310a1e77d6da42 94 SUPERFAMILY SSF54736 16 90 7.32E-21 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ATC04_13490 f54c8a90db7a7c7f2ce441d646c0fc21 95 Pfam PF06271 RDD family 6 89 5.4E-7 T 11-10-2018 IPR010432 RDD ATC04_08955 feb6f81ad379bca5360e5b84327657db 167 SUPERFAMILY SSF54427 5 149 1.47E-30 T 11-10-2018 IPR032710 NTF2-like domain superfamily ATC04_08955 feb6f81ad379bca5360e5b84327657db 167 Pfam PF13577 SnoaL-like domain 9 138 1.7E-24 T 11-10-2018 IPR037401 SnoaL-like domain ATC04_08955 feb6f81ad379bca5360e5b84327657db 167 Gene3D G3DSA:3.10.450.50 1 162 1.9E-33 T 11-10-2018 ATC04_02765 a4d3c7517b902e02b9f9d44f9225e430 187 Gene3D G3DSA:3.40.430.10 2 183 1.5E-37 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_02765 a4d3c7517b902e02b9f9d44f9225e430 187 SUPERFAMILY SSF53597 2 186 1.03E-29 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_02765 a4d3c7517b902e02b9f9d44f9225e430 187 Pfam PF01872 RibD C-terminal domain 2 178 1.7E-17 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ATC04_11130 71ed23a482af802820000668bdbf44a0 492 SUPERFAMILY SSF55961 344 489 2.75E-6 T 11-10-2018 ATC04_11130 71ed23a482af802820000668bdbf44a0 492 Pfam PF11066 Protein of unknown function (DUF2867) 334 479 9.2E-35 T 11-10-2018 IPR021295 Protein of unknown function DUF2867 ATC04_11130 71ed23a482af802820000668bdbf44a0 492 SUPERFAMILY SSF51735 3 284 5.75E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_11130 71ed23a482af802820000668bdbf44a0 492 Pfam PF13460 NAD(P)H-binding 8 120 2.4E-17 T 11-10-2018 IPR016040 NAD(P)-binding domain ATC04_11130 71ed23a482af802820000668bdbf44a0 492 Gene3D G3DSA:3.40.50.720 4 273 3.5E-40 T 11-10-2018 ATC04_09715 452b9572bdfc9157add8eb514d5f3239 274 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 260 4.5E-84 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ATC04_09715 452b9572bdfc9157add8eb514d5f3239 274 Pfam PF02673 Bacitracin resistance protein BacA 6 261 4.2E-83 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ATC04_09715 452b9572bdfc9157add8eb514d5f3239 274 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 267 17.579 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ATC04_08020 c50ce3200f1f69e2b03a2bbc7ece66e3 377 Gene3D G3DSA:3.40.50.150 3 178 2.9E-49 T 11-10-2018 ATC04_08020 c50ce3200f1f69e2b03a2bbc7ece66e3 377 SUPERFAMILY SSF53335 214 346 4.55E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_08020 c50ce3200f1f69e2b03a2bbc7ece66e3 377 Pfam PF05175 Methyltransferase small domain 202 370 2.8E-41 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ATC04_08020 c50ce3200f1f69e2b03a2bbc7ece66e3 377 Gene3D G3DSA:3.40.50.150 188 376 8.4E-47 T 11-10-2018 ATC04_15065 978b2822b35b65eed012a4a5ab9ad807 249 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_15065 978b2822b35b65eed012a4a5ab9ad807 249 Pfam PF00005 ABC transporter 32 178 1.1E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_15065 978b2822b35b65eed012a4a5ab9ad807 249 SUPERFAMILY SSF52540 15 232 9.35E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15065 978b2822b35b65eed012a4a5ab9ad807 249 Gene3D G3DSA:3.40.50.300 13 248 5.3E-65 T 11-10-2018 ATC04_15065 978b2822b35b65eed012a4a5ab9ad807 249 SMART SM00382 41 227 2.1E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_12395 03d49fcffece77cbc6dc1a96e1fd6c38 263 SUPERFAMILY SSF55174 3 53 1.62E-9 T 11-10-2018 ATC04_12395 03d49fcffece77cbc6dc1a96e1fd6c38 263 PIRSF PIRSF005578 1 261 6.0E-88 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 ATC04_12395 03d49fcffece77cbc6dc1a96e1fd6c38 263 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 3 236 8.0E-57 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 ATC04_12395 03d49fcffece77cbc6dc1a96e1fd6c38 263 Gene3D G3DSA:3.10.290.10 2 61 2.1E-15 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ATC04_12395 03d49fcffece77cbc6dc1a96e1fd6c38 263 SUPERFAMILY SSF53335 56 241 1.83E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_12395 03d49fcffece77cbc6dc1a96e1fd6c38 263 SMART SM00363 2 68 2.3E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_12395 03d49fcffece77cbc6dc1a96e1fd6c38 263 Pfam PF01479 S4 domain 3 44 7.8E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_12395 03d49fcffece77cbc6dc1a96e1fd6c38 263 Pfam PF01728 FtsJ-like methyltransferase 59 241 2.7E-20 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 ATC04_12395 03d49fcffece77cbc6dc1a96e1fd6c38 263 Gene3D G3DSA:3.40.50.150 62 262 8.5E-70 T 11-10-2018 ATC04_09840 8f5c255d0708005bb4fe93bdcb93a1a5 136 Gene3D G3DSA:3.10.180.10 4 125 6.4E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_09840 8f5c255d0708005bb4fe93bdcb93a1a5 136 SUPERFAMILY SSF54593 1 129 5.09E-19 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_09840 8f5c255d0708005bb4fe93bdcb93a1a5 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 2.3E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_13630 3aed447eeb50f0eefc948d8deaec9ae3 427 Gene3D G3DSA:3.40.630.10 22 421 2.3E-104 T 11-10-2018 ATC04_13630 3aed447eeb50f0eefc948d8deaec9ae3 427 Pfam PF01546 Peptidase family M20/M25/M40 84 424 5.7E-19 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ATC04_13630 3aed447eeb50f0eefc948d8deaec9ae3 427 Gene3D G3DSA:3.30.70.360 232 345 2.3E-104 T 11-10-2018 ATC04_13630 3aed447eeb50f0eefc948d8deaec9ae3 427 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 22 424 2.7E-76 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ATC04_13630 3aed447eeb50f0eefc948d8deaec9ae3 427 PIRSF PIRSF001235 5 427 7.4E-105 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ATC04_13630 3aed447eeb50f0eefc948d8deaec9ae3 427 SUPERFAMILY SSF53187 22 426 3.14E-51 T 11-10-2018 ATC04_13630 3aed447eeb50f0eefc948d8deaec9ae3 427 SUPERFAMILY SSF55031 232 339 5.06E-22 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ATC04_02990 51d0fa59fb81b38565a0b468c880446f 238 Pfam PF01925 Sulfite exporter TauE/SafE 4 226 2.4E-17 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ATC04_16350 d58bf5f32a318620406cb6a77d941f7a 304 Pfam PF13586 Transposase DDE domain 207 303 1.2E-22 T 11-10-2018 IPR025668 Transposase DDE domain ATC04_16350 d58bf5f32a318620406cb6a77d941f7a 304 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 12 84 1.7E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family ATC04_04185 1a3a1848c6f9c7b265e4188d92fccc10 336 Pfam PF03061 Thioesterase superfamily 185 259 1.7E-16 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ATC04_04185 1a3a1848c6f9c7b265e4188d92fccc10 336 Pfam PF03061 Thioesterase superfamily 27 99 3.2E-13 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ATC04_04185 1a3a1848c6f9c7b265e4188d92fccc10 336 SUPERFAMILY SSF54637 8 152 1.63E-33 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_04185 1a3a1848c6f9c7b265e4188d92fccc10 336 Gene3D G3DSA:3.10.129.10 159 312 4.5E-37 T 11-10-2018 ATC04_04185 1a3a1848c6f9c7b265e4188d92fccc10 336 Gene3D G3DSA:3.10.129.10 6 158 6.8E-36 T 11-10-2018 ATC04_04185 1a3a1848c6f9c7b265e4188d92fccc10 336 SUPERFAMILY SSF54637 169 309 1.37E-36 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_09855 273d7535c9fe5972924b2f6908f1f6cf 297 SUPERFAMILY SSF140931 32 206 4.45E-31 T 11-10-2018 IPR036597 Fido-like domain superfamily ATC04_09855 273d7535c9fe5972924b2f6908f1f6cf 297 Gene3D G3DSA:1.10.3290.10 13 201 9.2E-34 T 11-10-2018 IPR036597 Fido-like domain superfamily ATC04_09855 273d7535c9fe5972924b2f6908f1f6cf 297 Pfam PF02661 Fic/DOC family 41 138 1.0E-17 T 11-10-2018 IPR003812 Fido domain ATC04_11570 2bfd894b3787782d44997d363f0ea828 231 SUPERFAMILY SSF46785 5 75 2.29E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_11570 2bfd894b3787782d44997d363f0ea828 231 Gene3D G3DSA:1.10.10.10 2 73 9.1E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_11570 2bfd894b3787782d44997d363f0ea828 231 Gene3D G3DSA:3.30.450.40 74 227 2.9E-18 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_11570 2bfd894b3787782d44997d363f0ea828 231 SMART SM00346 4 91 1.2E-6 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_11570 2bfd894b3787782d44997d363f0ea828 231 Pfam PF09339 IclR helix-turn-helix domain 6 57 4.0E-11 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_11570 2bfd894b3787782d44997d363f0ea828 231 SUPERFAMILY SSF55781 66 230 2.94E-21 T 11-10-2018 ATC04_14110 f89335e55b843926213862854f57540f 456 Gene3D G3DSA:3.50.50.60 29 391 1.3E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14110 f89335e55b843926213862854f57540f 456 SUPERFAMILY SSF51905 7 304 1.24E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_14110 f89335e55b843926213862854f57540f 456 Pfam PF01266 FAD dependent oxidoreductase 29 389 7.9E-48 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATC04_14110 f89335e55b843926213862854f57540f 456 Gene3D G3DSA:3.30.9.10 124 351 1.3E-58 T 11-10-2018 ATC04_14200 f63e939db44e3a865d518243b690f464 97 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 27 96 18.674 T 11-10-2018 IPR003482 Transcription factor WhiB ATC04_14200 f63e939db44e3a865d518243b690f464 97 Pfam PF02467 Transcription factor WhiB 29 92 3.0E-26 T 11-10-2018 IPR034768 WhiB-like iron-sulfur binding domain ATC04_15505 979df09d405c7df33bc94e2d1a4bd495 105 Pfam PF10724 Protein of unknown function (DUF2516) 10 99 3.9E-26 T 11-10-2018 IPR019662 Protein of unknown function DUF2516 ATC04_05440 3fbb0353d98fe5c16b1c6eb76a7df20b 140 Pfam PF07681 DoxX 5 88 6.2E-20 T 11-10-2018 IPR032808 DoxX family ATC04_10165 1c13aec116cad9c77f6f00321782d3fa 426 SUPERFAMILY SSF118215 9 395 3.53E-69 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ATC04_10165 1c13aec116cad9c77f6f00321782d3fa 426 Gene3D G3DSA:1.10.3860.10 1 399 7.7E-49 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ATC04_10165 1c13aec116cad9c77f6f00321782d3fa 426 Pfam PF00375 Sodium:dicarboxylate symporter family 9 394 3.9E-67 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATC04_09435 d9dc2458f41b1e485bfd095465920bbf 308 SMART SM00909 94 191 0.0036 T 11-10-2018 IPR019606 GerMN domain ATC04_09435 d9dc2458f41b1e485bfd095465920bbf 308 Pfam PF10646 Sporulation and spore germination 67 187 4.6E-7 T 11-10-2018 IPR019606 GerMN domain ATC04_09585 3c10b1ef7f3e6a5255cbce08f64839e5 196 Gene3D G3DSA:3.40.430.10 1 193 4.2E-32 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_09585 3c10b1ef7f3e6a5255cbce08f64839e5 196 SUPERFAMILY SSF53597 25 192 1.44E-22 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_09585 3c10b1ef7f3e6a5255cbce08f64839e5 196 Pfam PF01872 RibD C-terminal domain 5 170 6.9E-17 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ATC04_04540 6d7103e8ed24bd1f276be24cc60849e8 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ATC04_04540 6d7103e8ed24bd1f276be24cc60849e8 496 Pfam PF00171 Aldehyde dehydrogenase family 19 476 8.0E-168 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_04540 6d7103e8ed24bd1f276be24cc60849e8 496 Gene3D G3DSA:3.40.605.10 13 474 1.8E-172 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_04540 6d7103e8ed24bd1f276be24cc60849e8 496 SUPERFAMILY SSF53720 6 478 1.31E-163 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_04540 6d7103e8ed24bd1f276be24cc60849e8 496 Gene3D G3DSA:3.40.309.10 257 446 1.8E-172 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_08975 94da04aad6e27fc011247df3d7aa50ee 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 129 6.2E-11 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_08975 94da04aad6e27fc011247df3d7aa50ee 146 SUPERFAMILY SSF54593 9 139 7.01E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_08975 94da04aad6e27fc011247df3d7aa50ee 146 Gene3D G3DSA:3.10.180.10 7 146 1.6E-38 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_00780 7acc6f03660990370e493c6b1c3a0917 431 Pfam PF07730 Histidine kinase 218 283 1.6E-17 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ATC04_00780 7acc6f03660990370e493c6b1c3a0917 431 Gene3D G3DSA:3.30.565.10 293 417 1.4E-23 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_00780 7acc6f03660990370e493c6b1c3a0917 431 SUPERFAMILY SSF55874 301 412 4.3E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_05320 fbcf477a68724f562768b284c0663c16 295 Pfam PF01040 UbiA prenyltransferase family 20 250 1.0E-34 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 ATC04_05320 fbcf477a68724f562768b284c0663c16 295 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 3 288 20.902 T 11-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 ATC04_05320 fbcf477a68724f562768b284c0663c16 295 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 12 287 3.0E-74 T 11-10-2018 ATC04_05320 fbcf477a68724f562768b284c0663c16 295 PIRSF PIRSF005355 1 292 2.9E-81 T 11-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 ATC04_17435 6bc8f3d60b08e5be064809087feb4686 259 SMART SM00382 29 230 4.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_17435 6bc8f3d60b08e5be064809087feb4686 259 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_17435 6bc8f3d60b08e5be064809087feb4686 259 Gene3D G3DSA:3.40.50.300 2 257 9.3E-64 T 11-10-2018 ATC04_17435 6bc8f3d60b08e5be064809087feb4686 259 SUPERFAMILY SSF52540 5 246 5.56E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_17435 6bc8f3d60b08e5be064809087feb4686 259 Pfam PF00005 ABC transporter 21 177 3.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_17435 6bc8f3d60b08e5be064809087feb4686 259 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 5 259 1.4E-111 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 ATC04_14385 e802e1ecfa0f92bd65e5c559d986729f 310 Pfam PF02541 Ppx/GppA phosphatase family 17 303 2.1E-56 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 ATC04_14385 e802e1ecfa0f92bd65e5c559d986729f 310 SUPERFAMILY SSF53067 130 306 7.69E-32 T 11-10-2018 ATC04_14385 e802e1ecfa0f92bd65e5c559d986729f 310 Gene3D G3DSA:3.30.420.150 126 310 1.2E-47 T 11-10-2018 ATC04_14385 e802e1ecfa0f92bd65e5c559d986729f 310 Gene3D G3DSA:3.30.420.40 1 125 5.6E-46 T 11-10-2018 ATC04_14385 e802e1ecfa0f92bd65e5c559d986729f 310 SUPERFAMILY SSF53067 2 123 5.72E-34 T 11-10-2018 ATC04_15455 caefa332462d2a40721fd61bfd1db544 315 Gene3D G3DSA:3.40.1280.10 144 311 5.1E-50 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATC04_15455 caefa332462d2a40721fd61bfd1db544 315 Pfam PF00588 SpoU rRNA Methylase family 163 304 1.3E-35 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ATC04_15455 caefa332462d2a40721fd61bfd1db544 315 SUPERFAMILY SSF75217 155 310 8.5E-43 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ATC04_15455 caefa332462d2a40721fd61bfd1db544 315 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 64 139 5.2E-15 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ATC04_15455 caefa332462d2a40721fd61bfd1db544 315 SMART SM00967 64 140 1.7E-15 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ATC04_15455 caefa332462d2a40721fd61bfd1db544 315 Gene3D G3DSA:3.30.1330.30 52 135 4.6E-9 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ATC04_15455 caefa332462d2a40721fd61bfd1db544 315 SUPERFAMILY SSF55315 59 136 5.1E-15 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ATC04_15455 caefa332462d2a40721fd61bfd1db544 315 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 63 309 2.2E-61 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 ATC04_17255 218f51b1b9302cb895b422e9772d1e5e 203 SUPERFAMILY SSF50814 14 196 7.67E-17 T 11-10-2018 IPR012674 Calycin ATC04_17255 218f51b1b9302cb895b422e9772d1e5e 203 Pfam PF08768 Domain of unknown function (DUF1794) 16 195 6.1E-18 T 11-10-2018 IPR014878 Domain of unknown function DUF1794 ATC04_17255 218f51b1b9302cb895b422e9772d1e5e 203 Gene3D G3DSA:2.40.128.20 11 196 3.6E-8 T 11-10-2018 IPR012674 Calycin ATC04_00870 5978a913da51e515992b8b7eafae302f 491 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 308 454 5.8E-41 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain ATC04_00870 5978a913da51e515992b8b7eafae302f 491 SUPERFAMILY SSF100950 1 213 4.54E-64 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_00870 5978a913da51e515992b8b7eafae302f 491 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 1 487 1.8E-237 T 11-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 ATC04_00870 5978a913da51e515992b8b7eafae302f 491 SUPERFAMILY SSF100950 216 487 3.73E-81 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_00870 5978a913da51e515992b8b7eafae302f 491 Gene3D G3DSA:3.40.1080.20 328 469 5.7E-37 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily ATC04_00870 5978a913da51e515992b8b7eafae302f 491 Gene3D G3DSA:3.30.750.70 217 303 3.6E-6 T 11-10-2018 ATC04_00870 5978a913da51e515992b8b7eafae302f 491 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 2 207 1.7E-29 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 ATC04_00870 5978a913da51e515992b8b7eafae302f 491 Gene3D G3DSA:3.40.1080.10 1 162 1.1E-10 T 11-10-2018 ATC04_11185 a27514799f51f44f41ed36df25425ff4 494 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 8 493 49.424 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 ATC04_11185 a27514799f51f44f41ed36df25425ff4 494 Gene3D G3DSA:3.50.50.60 121 272 2.6E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_11185 a27514799f51f44f41ed36df25425ff4 494 SUPERFAMILY SSF51905 7 324 1.01E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_11185 a27514799f51f44f41ed36df25425ff4 494 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 13 491 7.3E-218 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 ATC04_11185 a27514799f51f44f41ed36df25425ff4 494 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 11 493 3.8E-218 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 ATC04_12390 b71de7a675937f273d948ab28b53816c 342 SUPERFAMILY SSF111331 3 296 1.96E-76 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ATC04_12390 b71de7a675937f273d948ab28b53816c 342 Hamap MF_00361 NAD kinase [nadK]. 2 290 29.967 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ATC04_12390 b71de7a675937f273d948ab28b53816c 342 Gene3D G3DSA:2.60.200.30 130 267 1.2E-88 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ATC04_12390 b71de7a675937f273d948ab28b53816c 342 Gene3D G3DSA:3.40.50.10330 62 288 1.2E-88 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ATC04_12390 b71de7a675937f273d948ab28b53816c 342 Pfam PF01513 ATP-NAD kinase 3 274 6.8E-58 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ATC04_03040 0204cb11557790573db889348990c73f 161 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 101 2.8E-16 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ATC04_03040 0204cb11557790573db889348990c73f 161 SUPERFAMILY SSF69118 12 151 7.07E-30 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ATC04_03040 0204cb11557790573db889348990c73f 161 Gene3D G3DSA:1.20.1290.10 5 158 3.7E-36 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ATC04_03040 0204cb11557790573db889348990c73f 161 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 35 83 3.5E-15 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ATC04_17945 64f7d91f5f3b9ecb358e03b88963ddc4 495 SUPERFAMILY SSF52540 242 468 2.66E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_17945 64f7d91f5f3b9ecb358e03b88963ddc4 495 Pfam PF13614 AAA domain 243 339 5.0E-7 T 11-10-2018 IPR025669 AAA domain ATC04_17945 64f7d91f5f3b9ecb358e03b88963ddc4 495 Gene3D G3DSA:3.40.50.300 242 476 1.5E-23 T 11-10-2018 ATC04_06300 18ca311730ed119feddfa465189d7960 287 SUPERFAMILY SSF53448 4 249 1.22E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_06300 18ca311730ed119feddfa465189d7960 287 Pfam PF02709 N-terminal domain of galactosyltransferase 167 205 6.2E-6 T 11-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 ATC04_06300 18ca311730ed119feddfa465189d7960 287 Pfam PF00535 Glycosyl transferase family 2 6 118 2.5E-10 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATC04_06300 18ca311730ed119feddfa465189d7960 287 Gene3D G3DSA:3.90.550.10 2 220 2.1E-26 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_07875 d87b134baddf49578685d704f9b9be10 163 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 21 162 24.31 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATC04_07875 d87b134baddf49578685d704f9b9be10 163 Gene3D G3DSA:3.40.50.960 17 162 2.8E-50 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATC04_07875 d87b134baddf49578685d704f9b9be10 163 SUPERFAMILY SSF52121 24 161 1.14E-48 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATC04_07875 d87b134baddf49578685d704f9b9be10 163 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 26 160 4.2E-40 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATC04_07875 d87b134baddf49578685d704f9b9be10 163 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 26 160 8.5E-48 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATC04_06210 72dc9110618183607ba757226cf1b084 68 Gene3D G3DSA:3.30.1390.20 9 66 1.7E-21 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily ATC04_06210 72dc9110618183607ba757226cf1b084 68 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 12 66 4.7E-19 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06210 72dc9110618183607ba757226cf1b084 68 Pfam PF00327 Ribosomal protein L30p/L7e 13 61 7.5E-14 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain ATC04_06210 72dc9110618183607ba757226cf1b084 68 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 66 17.725 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_06210 72dc9110618183607ba757226cf1b084 68 SUPERFAMILY SSF55129 11 67 2.62E-17 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily ATC04_06210 72dc9110618183607ba757226cf1b084 68 PIRSF PIRSF002211 1 68 5.7E-25 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_09760 600ca2880059cd67d7896315dc4e0894 213 SUPERFAMILY SSF51735 7 197 4.89E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_09760 600ca2880059cd67d7896315dc4e0894 213 Gene3D G3DSA:3.40.50.720 2 199 9.8E-45 T 11-10-2018 ATC04_09760 600ca2880059cd67d7896315dc4e0894 213 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 93 2.2E-13 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ATC04_14980 26cb96baed82d917234f56a9ef0a3872 245 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 1 223 6.9E-55 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ATC04_14980 26cb96baed82d917234f56a9ef0a3872 245 Gene3D G3DSA:3.20.20.60 1 245 5.0E-84 T 11-10-2018 ATC04_14980 26cb96baed82d917234f56a9ef0a3872 245 SUPERFAMILY SSF51621 2 234 4.19E-76 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ATC04_13975 4f764ae17bcfe29714d032da762dcb7c 228 Gene3D G3DSA:3.20.20.70 1 226 4.3E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_13975 4f764ae17bcfe29714d032da762dcb7c 228 SUPERFAMILY SSF51569 4 221 1.36E-82 T 11-10-2018 ATC04_13975 4f764ae17bcfe29714d032da762dcb7c 228 Pfam PF01791 DeoC/LacD family aldolase 14 218 1.6E-17 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ATC04_13975 4f764ae17bcfe29714d032da762dcb7c 228 PIRSF PIRSF001357 2 227 8.2E-77 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ATC04_13975 4f764ae17bcfe29714d032da762dcb7c 228 SMART SM01133 8 221 4.3E-97 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ATC04_13975 4f764ae17bcfe29714d032da762dcb7c 228 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 9 219 3.3E-79 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ATC04_13975 4f764ae17bcfe29714d032da762dcb7c 228 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 7 223 35.734 T 11-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 ATC04_09085 a3d9318154b5b107ccd383e541a89591 186 SUPERFAMILY SSF53597 3 182 1.57E-26 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_09085 a3d9318154b5b107ccd383e541a89591 186 Gene3D G3DSA:3.40.430.10 1 185 2.4E-32 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_09085 a3d9318154b5b107ccd383e541a89591 186 Pfam PF01872 RibD C-terminal domain 4 173 3.5E-8 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ATC04_12930 5a574210846af18468433a2f492e7a8c 311 Pfam PF12706 Beta-lactamase superfamily domain 159 269 5.1E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_12930 5a574210846af18468433a2f492e7a8c 311 SUPERFAMILY SSF56281 6 301 9.34E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_12930 5a574210846af18468433a2f492e7a8c 311 Gene3D G3DSA:3.60.15.10 5 308 2.8E-48 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_17410 c012c50d86a9d0c64d3452a965a29c82 391 Gene3D G3DSA:1.20.1250.20 1 385 5.9E-40 T 11-10-2018 ATC04_17410 c012c50d86a9d0c64d3452a965a29c82 391 Pfam PF07690 Major Facilitator Superfamily 9 240 4.3E-16 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_17410 c012c50d86a9d0c64d3452a965a29c82 391 SUPERFAMILY SSF103473 2 384 1.57E-43 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_17410 c012c50d86a9d0c64d3452a965a29c82 391 PRINTS PR01035 Tetracycline resistance protein signature 129 151 6.0E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_17410 c012c50d86a9d0c64d3452a965a29c82 391 PRINTS PR01035 Tetracycline resistance protein signature 13 29 6.0E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_17410 c012c50d86a9d0c64d3452a965a29c82 391 PRINTS PR01035 Tetracycline resistance protein signature 252 272 6.0E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_12290 68d30ecf6713372d313d94483d51d9be 196 Gene3D G3DSA:1.10.10.10 3 92 3.9E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_12290 68d30ecf6713372d313d94483d51d9be 196 Gene3D G3DSA:1.10.10.10 93 184 2.1E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_12290 68d30ecf6713372d313d94483d51d9be 196 SUPERFAMILY SSF46785 94 167 8.3E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_12290 68d30ecf6713372d313d94483d51d9be 196 SUPERFAMILY SSF46785 14 89 1.64E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_12290 68d30ecf6713372d313d94483d51d9be 196 PIRSF PIRSF019345 3 191 3.4E-55 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ATC04_12290 68d30ecf6713372d313d94483d51d9be 196 Pfam PF04079 Segregation and condensation complex subunit ScpB 18 176 3.9E-55 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ATC04_12290 68d30ecf6713372d313d94483d51d9be 196 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 16 176 7.0E-32 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ATC04_05300 581850fd192e3d6b7dc50a563323b47e 542 Pfam PF05140 ResB-like family 33 516 2.3E-131 T 11-10-2018 IPR007816 ResB-like domain ATC04_02650 6503ff6cb0cb5535336cc90ddd605a5f 428 Pfam PF08239 Bacterial SH3 domain 131 181 5.4E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_02650 6503ff6cb0cb5535336cc90ddd605a5f 428 Pfam PF08239 Bacterial SH3 domain 53 105 4.8E-12 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_02650 6503ff6cb0cb5535336cc90ddd605a5f 428 Gene3D G3DSA:2.30.30.40 123 182 3.8E-15 T 11-10-2018 ATC04_02650 6503ff6cb0cb5535336cc90ddd605a5f 428 Gene3D G3DSA:3.30.1380.10 260 428 3.7E-17 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ATC04_02650 6503ff6cb0cb5535336cc90ddd605a5f 428 SUPERFAMILY SSF50044 69 118 3.37E-6 T 11-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 ATC04_02650 6503ff6cb0cb5535336cc90ddd605a5f 428 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 313 428 7.2E-12 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 ATC04_02650 6503ff6cb0cb5535336cc90ddd605a5f 428 SMART SM00287 120 185 0.078 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_02650 6503ff6cb0cb5535336cc90ddd605a5f 428 SMART SM00287 44 108 7.6E-7 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_02650 6503ff6cb0cb5535336cc90ddd605a5f 428 Gene3D G3DSA:2.30.30.40 42 105 7.0E-19 T 11-10-2018 ATC04_02650 6503ff6cb0cb5535336cc90ddd605a5f 428 SUPERFAMILY SSF55166 306 427 4.71E-20 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ATC04_16135 5e2bbfe44392a43be000edb766f8d21f 323 SUPERFAMILY SSF52283 1 124 7.02E-22 T 11-10-2018 ATC04_16135 5e2bbfe44392a43be000edb766f8d21f 323 Gene3D G3DSA:3.40.50.720 108 308 3.7E-108 T 11-10-2018 ATC04_16135 5e2bbfe44392a43be000edb766f8d21f 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 29 319 7.5E-13 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ATC04_16135 5e2bbfe44392a43be000edb766f8d21f 323 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ATC04_16135 5e2bbfe44392a43be000edb766f8d21f 323 Gene3D G3DSA:3.40.50.720 2 316 3.7E-108 T 11-10-2018 ATC04_16135 5e2bbfe44392a43be000edb766f8d21f 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 115 292 3.1E-47 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ATC04_16135 5e2bbfe44392a43be000edb766f8d21f 323 SUPERFAMILY SSF51735 108 293 7.14E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_10190 1089995ae8c444c3ec3d65750a5c6b3e 202 Pfam PF13649 Methyltransferase domain 54 150 1.1E-14 T 11-10-2018 ATC04_10190 1089995ae8c444c3ec3d65750a5c6b3e 202 SUPERFAMILY SSF53335 19 190 1.04E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_10190 1089995ae8c444c3ec3d65750a5c6b3e 202 Gene3D G3DSA:3.40.50.150 6 200 2.4E-52 T 11-10-2018 ATC04_04480 d8f7a90d07979a1685fd3fa8118d2b6d 946 Pfam PF02347 Glycine cleavage system P-protein 15 437 1.7E-174 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ATC04_04480 d8f7a90d07979a1685fd3fa8118d2b6d 946 Pfam PF02347 Glycine cleavage system P-protein 468 737 2.5E-9 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ATC04_04480 d8f7a90d07979a1685fd3fa8118d2b6d 946 SUPERFAMILY SSF53383 470 939 5.96E-88 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_04480 d8f7a90d07979a1685fd3fa8118d2b6d 946 SUPERFAMILY SSF53383 15 435 2.01E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_04480 d8f7a90d07979a1685fd3fa8118d2b6d 946 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 15 938 0.0 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ATC04_04480 d8f7a90d07979a1685fd3fa8118d2b6d 946 Gene3D G3DSA:3.40.640.10 93 353 7.3E-102 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_04480 d8f7a90d07979a1685fd3fa8118d2b6d 946 Gene3D G3DSA:3.40.640.10 509 743 6.1E-55 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_04480 d8f7a90d07979a1685fd3fa8118d2b6d 946 Gene3D G3DSA:3.90.1150.10 752 884 1.2E-39 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_04480 d8f7a90d07979a1685fd3fa8118d2b6d 946 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 6 944 23.936 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ATC04_10025 6aef6775f3b10400889fc19372bb8d7e 484 Pfam PF02720 Domain of unknown function (DUF222) 45 310 9.7E-11 T 11-10-2018 IPR003870 Domain of unknown function DUF222 ATC04_04935 9cc3d6047b89168a6928927bb6587662 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 1.7E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04935 9cc3d6047b89168a6928927bb6587662 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 1.7E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04935 9cc3d6047b89168a6928927bb6587662 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 1.7E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04935 9cc3d6047b89168a6928927bb6587662 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 1.7E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04935 9cc3d6047b89168a6928927bb6587662 156 Gene3D G3DSA:1.10.10.10 2 146 1.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_04935 9cc3d6047b89168a6928927bb6587662 156 SMART SM00347 26 130 1.5E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04935 9cc3d6047b89168a6928927bb6587662 156 Pfam PF01047 MarR family 54 95 2.2E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04935 9cc3d6047b89168a6928927bb6587662 156 SUPERFAMILY SSF46785 6 146 3.15E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_13955 f72cb4c8b6d3fc6ae52eebdf66318af2 462 SUPERFAMILY SSF103473 12 459 1.57E-58 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_13955 f72cb4c8b6d3fc6ae52eebdf66318af2 462 Pfam PF07690 Major Facilitator Superfamily 40 409 9.5E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_13955 f72cb4c8b6d3fc6ae52eebdf66318af2 462 Gene3D G3DSA:1.20.1250.20 15 462 6.8E-58 T 11-10-2018 ATC04_13955 f72cb4c8b6d3fc6ae52eebdf66318af2 462 ProSitePatterns PS00216 Sugar transport proteins signature 1. 325 342 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_03015 35be1af7859eeabf0b7204629f43ffcb 233 Pfam PF13649 Methyltransferase domain 59 152 1.1E-14 T 11-10-2018 ATC04_03015 35be1af7859eeabf0b7204629f43ffcb 233 Gene3D G3DSA:3.40.50.150 29 219 3.8E-22 T 11-10-2018 ATC04_03015 35be1af7859eeabf0b7204629f43ffcb 233 SUPERFAMILY SSF53335 22 151 2.43E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_09645 50619f9b900d5bd0c4eec24bc0812e6e 71 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 7.2E-17 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ATC04_09645 50619f9b900d5bd0c4eec24bc0812e6e 71 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 70 19.347 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ATC04_09645 50619f9b900d5bd0c4eec24bc0812e6e 71 Pfam PF02416 mttA/Hcf106 family 7 54 7.4E-18 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ATC04_13485 5771f832580f05aed5f0ba39b891dda0 93 SUPERFAMILY SSF54909 2 90 2.27E-11 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_13485 5771f832580f05aed5f0ba39b891dda0 93 Gene3D G3DSA:3.30.70.100 1 89 2.6E-9 T 11-10-2018 ATC04_13485 5771f832580f05aed5f0ba39b891dda0 93 Pfam PF03992 Antibiotic biosynthesis monooxygenase 28 70 6.9E-6 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ATC04_09600 acc9ad3855bf00990bb9307019c2a1d3 212 PRINTS PR01576 Peptide deformylase signature 157 186 4.3E-28 T 11-10-2018 IPR023635 Peptide deformylase ATC04_09600 acc9ad3855bf00990bb9307019c2a1d3 212 PRINTS PR01576 Peptide deformylase signature 126 137 4.3E-28 T 11-10-2018 IPR023635 Peptide deformylase ATC04_09600 acc9ad3855bf00990bb9307019c2a1d3 212 PRINTS PR01576 Peptide deformylase signature 138 156 4.3E-28 T 11-10-2018 IPR023635 Peptide deformylase ATC04_09600 acc9ad3855bf00990bb9307019c2a1d3 212 PRINTS PR01576 Peptide deformylase signature 57 86 4.3E-28 T 11-10-2018 IPR023635 Peptide deformylase ATC04_09600 acc9ad3855bf00990bb9307019c2a1d3 212 Gene3D G3DSA:3.90.45.10 24 208 5.1E-50 T 11-10-2018 IPR036821 Peptide deformylase superfamily ATC04_09600 acc9ad3855bf00990bb9307019c2a1d3 212 SUPERFAMILY SSF56420 24 188 4.45E-44 T 11-10-2018 IPR036821 Peptide deformylase superfamily ATC04_09600 acc9ad3855bf00990bb9307019c2a1d3 212 Pfam PF01327 Polypeptide deformylase 27 186 4.6E-40 T 11-10-2018 IPR023635 Peptide deformylase ATC04_09600 acc9ad3855bf00990bb9307019c2a1d3 212 PIRSF PIRSF004749 4 209 9.3E-45 T 11-10-2018 IPR023635 Peptide deformylase ATC04_09600 acc9ad3855bf00990bb9307019c2a1d3 212 Hamap MF_00163 Peptide deformylase [def]. 24 192 23.386 T 11-10-2018 IPR023635 Peptide deformylase ATC04_08675 3b75495b482b703cd52f73831d95d689 186 Pfam PF01467 Cytidylyltransferase-like 2 158 2.3E-29 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATC04_08675 3b75495b482b703cd52f73831d95d689 186 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 2 62 5.1E-11 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATC04_08675 3b75495b482b703cd52f73831d95d689 186 SUPERFAMILY SSF52374 1 185 3.85E-49 T 11-10-2018 ATC04_08675 3b75495b482b703cd52f73831d95d689 186 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 184 26.309 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 ATC04_08675 3b75495b482b703cd52f73831d95d689 186 Gene3D G3DSA:3.40.50.620 1 186 9.7E-57 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_08675 3b75495b482b703cd52f73831d95d689 186 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 1 183 2.0E-51 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 ATC04_11265 66932e17c801af9ac94f8e811644d714 293 Pfam PF02154 Flagellar motor switch protein FliM 15 195 2.0E-25 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ATC04_11265 66932e17c801af9ac94f8e811644d714 293 SUPERFAMILY SSF101801 219 289 3.92E-8 T 11-10-2018 IPR036429 SpoA-like superfamily ATC04_11265 66932e17c801af9ac94f8e811644d714 293 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 225 287 1.2E-7 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) ATC04_11265 66932e17c801af9ac94f8e811644d714 293 Gene3D G3DSA:3.40.1550.10 23 205 1.0E-29 T 11-10-2018 IPR028976 CheC-like superfamily ATC04_13235 008813f0f78a99a490e6acf8346a2339 351 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 32 63 2.1E-6 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ATC04_13235 008813f0f78a99a490e6acf8346a2339 351 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 146 330 4.9E-28 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_13235 008813f0f78a99a490e6acf8346a2339 351 Gene3D G3DSA:1.10.3720.10 117 327 6.2E-20 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_13235 008813f0f78a99a490e6acf8346a2339 351 SUPERFAMILY SSF161098 125 314 1.44E-23 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_10545 93aa3a25f0e1e22536c855ecb4ec9db8 67 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 2 65 12.008 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_10545 93aa3a25f0e1e22536c855ecb4ec9db8 67 SUPERFAMILY SSF57829 2 44 2.32E-9 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 ATC04_10545 93aa3a25f0e1e22536c855ecb4ec9db8 67 Pfam PF01783 Ribosomal L32p protein family 2 44 1.0E-12 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_10545 93aa3a25f0e1e22536c855ecb4ec9db8 67 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 44 3.7E-11 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00750 133e1e4a668370eb697e3c29434bc3d8 398 SUPERFAMILY SSF56784 233 390 8.26E-30 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_00750 133e1e4a668370eb697e3c29434bc3d8 398 Pfam PF02348 Cytidylyltransferase 11 152 6.0E-24 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 ATC04_00750 133e1e4a668370eb697e3c29434bc3d8 398 Gene3D G3DSA:3.40.50.1000 231 398 1.2E-44 T 11-10-2018 IPR023214 HAD superfamily ATC04_00750 133e1e4a668370eb697e3c29434bc3d8 398 Pfam PF08282 haloacid dehalogenase-like hydrolase 296 372 2.3E-7 T 11-10-2018 ATC04_00750 133e1e4a668370eb697e3c29434bc3d8 398 SUPERFAMILY SSF53448 8 222 8.7E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_00750 133e1e4a668370eb697e3c29434bc3d8 398 Gene3D G3DSA:3.90.550.10 6 226 2.3E-59 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_01055 1d31fd6652baad77dc4359186f01b4fd 393 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 379 3.7E-41 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ATC04_05480 8181a9d9c75c5861b7bf410c6a96f90f 387 Gene3D G3DSA:3.40.50.970 2 378 8.0E-110 T 11-10-2018 ATC04_05480 8181a9d9c75c5861b7bf410c6a96f90f 387 Pfam PF00676 Dehydrogenase E1 component 74 339 3.5E-74 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ATC04_05480 8181a9d9c75c5861b7bf410c6a96f90f 387 SUPERFAMILY SSF52518 58 380 1.47E-91 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_05480 8181a9d9c75c5861b7bf410c6a96f90f 387 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 36 377 6.7E-127 T 11-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ATC04_05095 7b3681a146c0fc9f38e26519c14728ad 158 SUPERFAMILY SSF55298 8 156 9.42E-57 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ATC04_05095 7b3681a146c0fc9f38e26519c14728ad 158 Gene3D G3DSA:3.30.1330.40 1 158 1.6E-61 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ATC04_05095 7b3681a146c0fc9f38e26519c14728ad 158 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 10 156 6.2E-34 T 11-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ATC04_04470 fb6eb462891398fff9db640db64c065f 385 Gene3D G3DSA:3.40.710.30 2 381 1.4E-102 T 11-10-2018 ATC04_04470 fb6eb462891398fff9db640db64c065f 385 SUPERFAMILY SSF56601 7 355 2.38E-43 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ATC04_04470 fb6eb462891398fff9db640db64c065f 385 Pfam PF00144 Beta-lactamase 26 359 2.3E-42 T 11-10-2018 IPR001466 Beta-lactamase-related ATC04_09135 f1e608707074070ca692c0992c295b90 578 Gene3D G3DSA:3.30.70.3400 43 130 1.2E-17 T 11-10-2018 ATC04_09135 f1e608707074070ca692c0992c295b90 578 Gene3D G3DSA:3.30.1360.200 168 312 1.1E-26 T 11-10-2018 ATC04_09135 f1e608707074070ca692c0992c295b90 578 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 241 478 9.1E-55 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ATC04_09135 f1e608707074070ca692c0992c295b90 578 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 7 501 38.071 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ATC04_09135 f1e608707074070ca692c0992c295b90 578 Pfam PF02355 Protein export membrane protein 315 476 2.3E-9 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ATC04_09135 f1e608707074070ca692c0992c295b90 578 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 43 483 8.1E-100 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ATC04_09135 f1e608707074070ca692c0992c295b90 578 SUPERFAMILY SSF82866 293 493 1.57E-28 T 11-10-2018 ATC04_04115 18831383e01c2dde33d2d04bd53609f6 501 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 8 494 1.2E-197 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 ATC04_04115 18831383e01c2dde33d2d04bd53609f6 501 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 439 8.8E-90 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ATC04_04115 18831383e01c2dde33d2d04bd53609f6 501 Pfam PF00474 Sodium:solute symporter family 35 439 1.2E-98 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ATC04_04115 18831383e01c2dde33d2d04bd53609f6 501 Gene3D G3DSA:1.20.1730.10 23 500 4.2E-93 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily ATC04_08470 97be7b8e92846c7d02480807acb152b4 202 SUPERFAMILY SSF52833 6 162 1.62E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_08470 97be7b8e92846c7d02480807acb152b4 202 Gene3D G3DSA:3.40.30.10 1 202 3.1E-71 T 11-10-2018 ATC04_08470 97be7b8e92846c7d02480807acb152b4 202 Pfam PF01323 DSBA-like thioredoxin domain 7 160 4.3E-8 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 ATC04_01920 07c53abd1202195d5ca83f096f2a29e3 393 Pfam PF13191 AAA ATPase domain 19 190 8.8E-14 T 11-10-2018 ATC04_01920 07c53abd1202195d5ca83f096f2a29e3 393 SUPERFAMILY SSF52540 6 284 4.23E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_01920 07c53abd1202195d5ca83f096f2a29e3 393 Gene3D G3DSA:3.40.50.300 15 226 2.7E-10 T 11-10-2018 ATC04_04510 17145574a544ed3c03a678397bb19dce 369 Gene3D G3DSA:3.20.20.70 3 366 3.1E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_04510 17145574a544ed3c03a678397bb19dce 369 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 354 2.2E-71 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ATC04_04510 17145574a544ed3c03a678397bb19dce 369 SUPERFAMILY SSF51395 1 361 2.09E-101 T 11-10-2018 ATC04_14885 c6aeb3a34c3560bd065b627fb8b6b928 544 SMART SM00797 253 544 6.6E-83 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B ATC04_14885 c6aeb3a34c3560bd065b627fb8b6b928 544 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 192 5.6E-57 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D ATC04_14885 c6aeb3a34c3560bd065b627fb8b6b928 544 Gene3D G3DSA:2.40.100.10 412 535 1.5E-37 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ATC04_14885 c6aeb3a34c3560bd065b627fb8b6b928 544 SUPERFAMILY SSF50891 82 204 1.93E-38 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ATC04_14885 c6aeb3a34c3560bd065b627fb8b6b928 544 Gene3D G3DSA:3.30.1360.40 2 76 7.4E-13 T 11-10-2018 ATC04_14885 c6aeb3a34c3560bd065b627fb8b6b928 544 Gene3D G3DSA:2.40.100.10 77 203 2.1E-52 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ATC04_14885 c6aeb3a34c3560bd065b627fb8b6b928 544 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 254 528 1.0E-71 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B ATC04_14885 c6aeb3a34c3560bd065b627fb8b6b928 544 SMART SM00796 4 193 1.3E-72 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D ATC04_14885 c6aeb3a34c3560bd065b627fb8b6b928 544 SUPERFAMILY SSF50891 415 531 1.21E-10 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ATC04_06025 d7846c11a958b5ca43779382e1619739 278 PRINTS PR00338 Transcription termination factor NUSG signature 235 250 1.1E-12 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ATC04_06025 d7846c11a958b5ca43779382e1619739 278 PRINTS PR00338 Transcription termination factor NUSG signature 146 158 1.1E-12 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ATC04_06025 d7846c11a958b5ca43779382e1619739 278 PRINTS PR00338 Transcription termination factor NUSG signature 253 269 1.1E-12 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ATC04_06025 d7846c11a958b5ca43779382e1619739 278 SUPERFAMILY SSF50104 221 277 4.71E-14 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily ATC04_06025 d7846c11a958b5ca43779382e1619739 278 Pfam PF02357 Transcription termination factor nusG 93 195 3.6E-21 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ATC04_06025 d7846c11a958b5ca43779382e1619739 278 SUPERFAMILY SSF82679 93 196 1.18E-34 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ATC04_06025 d7846c11a958b5ca43779382e1619739 278 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 91 277 21.249 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ATC04_06025 d7846c11a958b5ca43779382e1619739 278 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 94 277 9.7E-53 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ATC04_06025 d7846c11a958b5ca43779382e1619739 278 Gene3D G3DSA:2.30.30.30 218 277 3.9E-19 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 ATC04_06025 d7846c11a958b5ca43779382e1619739 278 Gene3D G3DSA:3.30.70.940 89 207 4.7E-38 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ATC04_06025 d7846c11a958b5ca43779382e1619739 278 SMART SM00738 91 199 1.6E-39 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ATC04_06160 1f41bc712fa1e959c049a6598aa7a369 265 Pfam PF12833 Helix-turn-helix domain 181 259 4.6E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATC04_06160 1f41bc712fa1e959c049a6598aa7a369 265 SUPERFAMILY SSF46689 210 261 8.51E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_06160 1f41bc712fa1e959c049a6598aa7a369 265 SMART SM00342 174 258 5.3E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATC04_06160 1f41bc712fa1e959c049a6598aa7a369 265 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 254 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ATC04_06160 1f41bc712fa1e959c049a6598aa7a369 265 Gene3D G3DSA:1.10.10.60 162 263 2.0E-21 T 11-10-2018 ATC04_00915 ef2e80a5633bd3d000e135e9b3ac919f 311 Pfam PF00892 EamA-like transporter family 20 144 3.4E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ATC04_00915 ef2e80a5633bd3d000e135e9b3ac919f 311 Pfam PF00892 EamA-like transporter family 156 286 7.1E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ATC04_00915 ef2e80a5633bd3d000e135e9b3ac919f 311 SUPERFAMILY SSF103481 192 291 5.23E-9 T 11-10-2018 ATC04_00915 ef2e80a5633bd3d000e135e9b3ac919f 311 SUPERFAMILY SSF103481 50 148 2.29E-13 T 11-10-2018 ATC04_04620 a52046ded552ce81dc07367ea1622e6e 67 Gene3D G3DSA:3.40.5.90 5 67 2.6E-14 T 11-10-2018 ATC04_04620 a52046ded552ce81dc07367ea1622e6e 67 SMART SM00704 21 63 4.2E-5 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 ATC04_04620 a52046ded552ce81dc07367ea1622e6e 67 Pfam PF09360 Iron-binding zinc finger CDGSH type 14 58 1.2E-18 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 ATC04_04030 3d8cf85916dd221f696a6171110bb2ef 295 Pfam PF03576 Peptidase family S58 5 289 1.5E-43 T 11-10-2018 IPR005321 Peptidase S58, DmpA ATC04_04030 3d8cf85916dd221f696a6171110bb2ef 295 SUPERFAMILY SSF56266 5 288 1.39E-47 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ATC04_04030 3d8cf85916dd221f696a6171110bb2ef 295 Gene3D G3DSA:3.60.70.12 3 295 2.9E-83 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ATC04_00210 f56360fc534adfc716ef89ecb69b0eba 457 PIRSF PIRSF026631 1 457 1.4E-74 T 11-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 ATC04_00210 f56360fc534adfc716ef89ecb69b0eba 457 Pfam PF03703 Bacterial PH domain 68 147 8.5E-17 T 11-10-2018 IPR005182 Domain of unknown function DUF304 ATC04_00210 f56360fc534adfc716ef89ecb69b0eba 457 Pfam PF03703 Bacterial PH domain 372 431 1.3E-9 T 11-10-2018 IPR005182 Domain of unknown function DUF304 ATC04_00210 f56360fc534adfc716ef89ecb69b0eba 457 Pfam PF03703 Bacterial PH domain 249 315 3.0E-5 T 11-10-2018 IPR005182 Domain of unknown function DUF304 ATC04_15435 4b6c9eb7d4cd151b60f6ca17c86b4e49 457 SUPERFAMILY SSF56176 5 220 7.94E-63 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ATC04_15435 4b6c9eb7d4cd151b60f6ca17c86b4e49 457 Pfam PF02913 FAD linked oxidases, C-terminal domain 224 455 5.8E-45 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ATC04_15435 4b6c9eb7d4cd151b60f6ca17c86b4e49 457 Gene3D G3DSA:3.30.465.40 11 233 1.4E-66 T 11-10-2018 ATC04_15435 4b6c9eb7d4cd151b60f6ca17c86b4e49 457 Pfam PF01565 FAD binding domain 44 182 6.0E-40 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ATC04_15435 4b6c9eb7d4cd151b60f6ca17c86b4e49 457 SUPERFAMILY SSF55103 194 456 2.29E-42 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ATC04_15435 4b6c9eb7d4cd151b60f6ca17c86b4e49 457 Gene3D G3DSA:1.10.45.10 417 457 1.2E-12 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ATC04_15435 4b6c9eb7d4cd151b60f6ca17c86b4e49 457 Gene3D G3DSA:3.30.70.2740 335 416 4.6E-10 T 11-10-2018 ATC04_04495 f8138e3550642c3661d455b2ec53f9c6 440 Pfam PF00464 Serine hydroxymethyltransferase 19 400 1.3E-165 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ATC04_04495 f8138e3550642c3661d455b2ec53f9c6 440 PIRSF PIRSF000412 2 437 1.2E-158 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ATC04_04495 f8138e3550642c3661d455b2ec53f9c6 440 SUPERFAMILY SSF53383 5 434 8.48E-173 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_04495 f8138e3550642c3661d455b2ec53f9c6 440 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 433 50.441 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ATC04_04495 f8138e3550642c3661d455b2ec53f9c6 440 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ATC04_04495 f8138e3550642c3661d455b2ec53f9c6 440 Gene3D G3DSA:3.40.640.10 47 298 4.3E-177 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_04495 f8138e3550642c3661d455b2ec53f9c6 440 Gene3D G3DSA:3.90.1150.10 20 405 4.3E-177 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_08585 a296f0d91b6e721e38d0fd1c78f00476 729 SUPERFAMILY SSF52540 194 725 2.05E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08585 a296f0d91b6e721e38d0fd1c78f00476 729 Gene3D G3DSA:3.40.50.300 486 617 4.7E-12 T 11-10-2018 ATC04_08585 a296f0d91b6e721e38d0fd1c78f00476 729 Pfam PF13245 AAA domain 208 573 3.2E-10 T 11-10-2018 ATC04_08585 a296f0d91b6e721e38d0fd1c78f00476 729 Gene3D G3DSA:3.40.50.300 191 373 1.4E-10 T 11-10-2018 ATC04_08585 a296f0d91b6e721e38d0fd1c78f00476 729 Gene3D G3DSA:3.40.50.300 641 728 2.1E-6 T 11-10-2018 ATC04_12385 55049d0aad2c3f75e66d0a055081866d 584 Gene3D G3DSA:3.40.50.300 1 273 8.9E-37 T 11-10-2018 ATC04_12385 55049d0aad2c3f75e66d0a055081866d 584 Gene3D G3DSA:3.40.50.300 279 568 7.6E-57 T 11-10-2018 ATC04_12385 55049d0aad2c3f75e66d0a055081866d 584 PIRSF PIRSF003128 1 572 3.2E-149 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ATC04_12385 55049d0aad2c3f75e66d0a055081866d 584 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 567 1.9E-155 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ATC04_12385 55049d0aad2c3f75e66d0a055081866d 584 SUPERFAMILY SSF52540 1 518 2.35E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12385 55049d0aad2c3f75e66d0a055081866d 584 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 521 3.1E-17 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal ATC04_03540 ef5a3823f7788e1dcd14678eba4446fe 256 SMART SM00346 9 97 8.5E-23 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_03540 ef5a3823f7788e1dcd14678eba4446fe 256 Gene3D G3DSA:1.10.10.10 2 75 6.8E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03540 ef5a3823f7788e1dcd14678eba4446fe 256 Gene3D G3DSA:3.30.450.40 76 252 8.2E-53 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_03540 ef5a3823f7788e1dcd14678eba4446fe 256 SUPERFAMILY SSF46785 9 80 1.15E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03540 ef5a3823f7788e1dcd14678eba4446fe 256 Pfam PF09339 IclR helix-turn-helix domain 11 62 4.1E-13 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_03540 ef5a3823f7788e1dcd14678eba4446fe 256 Pfam PF01614 Bacterial transcriptional regulator 126 248 1.8E-32 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ATC04_03540 ef5a3823f7788e1dcd14678eba4446fe 256 SUPERFAMILY SSF55781 78 253 7.19E-45 T 11-10-2018 ATC04_08025 3af98ce1b4d4c5685d9a4d4c6a512161 224 SUPERFAMILY SSF54211 11 140 2.54E-38 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ATC04_08025 3af98ce1b4d4c5685d9a4d4c6a512161 224 Pfam PF01205 Uncharacterized protein family UPF0029 25 136 9.4E-28 T 11-10-2018 IPR001498 Impact, N-terminal ATC04_08025 3af98ce1b4d4c5685d9a4d4c6a512161 224 Gene3D G3DSA:3.30.230.30 6 145 1.0E-51 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily ATC04_01960 7783a31bfc8e0a7ef191bd66ce27e084 226 SUPERFAMILY SSF51735 5 216 3.0E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_01960 7783a31bfc8e0a7ef191bd66ce27e084 226 Pfam PF13460 NAD(P)H-binding 11 201 4.7E-41 T 11-10-2018 IPR016040 NAD(P)-binding domain ATC04_01960 7783a31bfc8e0a7ef191bd66ce27e084 226 Gene3D G3DSA:3.40.50.720 1 226 5.7E-42 T 11-10-2018 ATC04_14960 f07608416422d6c03935f1802921ebf3 503 Gene3D G3DSA:3.40.50.720 308 481 8.5E-14 T 11-10-2018 ATC04_14960 f07608416422d6c03935f1802921ebf3 503 Pfam PF00106 short chain dehydrogenase 151 246 3.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_14960 f07608416422d6c03935f1802921ebf3 503 Gene3D G3DSA:3.40.50.720 139 257 3.0E-19 T 11-10-2018 ATC04_14960 f07608416422d6c03935f1802921ebf3 503 SUPERFAMILY SSF51735 147 450 6.81E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_15760 0e55cd4f07e0ec9c5e4da47a46df8094 400 Gene3D G3DSA:1.20.1720.10 14 389 9.0E-92 T 11-10-2018 ATC04_15760 0e55cd4f07e0ec9c5e4da47a46df8094 400 Pfam PF07690 Major Facilitator Superfamily 19 357 2.6E-44 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_15760 0e55cd4f07e0ec9c5e4da47a46df8094 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 17 387 8.3E-83 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 ATC04_15760 0e55cd4f07e0ec9c5e4da47a46df8094 400 SUPERFAMILY SSF103473 5 391 2.49E-59 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_04875 dca1c433e736a2acbb0fbecbb8de047c 194 PIRSF PIRSF019239 9 174 1.8E-28 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 ATC04_04875 dca1c433e736a2acbb0fbecbb8de047c 194 Pfam PF01899 Na+/H+ ion antiporter subunit 20 167 2.2E-33 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 ATC04_11525 d39a3f01d57fd2f1afda498d9584abb7 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 2.7E-10 T 11-10-2018 ATC04_11525 d39a3f01d57fd2f1afda498d9584abb7 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 2.7E-10 T 11-10-2018 ATC04_11525 d39a3f01d57fd2f1afda498d9584abb7 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 2.7E-10 T 11-10-2018 ATC04_11525 d39a3f01d57fd2f1afda498d9584abb7 474 SUPERFAMILY SSF103473 6 460 5.36E-55 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_11525 d39a3f01d57fd2f1afda498d9584abb7 474 Gene3D G3DSA:1.20.1250.20 267 468 3.3E-14 T 11-10-2018 ATC04_11525 d39a3f01d57fd2f1afda498d9584abb7 474 Gene3D G3DSA:1.20.1720.10 15 229 1.4E-41 T 11-10-2018 ATC04_11525 d39a3f01d57fd2f1afda498d9584abb7 474 Pfam PF07690 Major Facilitator Superfamily 20 421 5.7E-42 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_11525 d39a3f01d57fd2f1afda498d9584abb7 474 ProSitePatterns PS00217 Sugar transport proteins signature 2. 111 136 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATC04_03395 97453fc9d73d6c8d68851f9c7e8d8b5e 489 Gene3D G3DSA:1.20.1250.20 265 477 7.1E-12 T 11-10-2018 ATC04_03395 97453fc9d73d6c8d68851f9c7e8d8b5e 489 SUPERFAMILY SSF103473 201 469 9.16E-19 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_03395 97453fc9d73d6c8d68851f9c7e8d8b5e 489 Pfam PF07690 Major Facilitator Superfamily 24 414 3.0E-23 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_03395 97453fc9d73d6c8d68851f9c7e8d8b5e 489 SUPERFAMILY SSF103473 7 194 3.01E-25 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_03395 97453fc9d73d6c8d68851f9c7e8d8b5e 489 Gene3D G3DSA:1.20.1720.10 18 200 3.8E-25 T 11-10-2018 ATC04_14155 ad0e630f09244700ced36d5c327365e9 298 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 27 223 1.3E-26 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ATC04_14155 ad0e630f09244700ced36d5c327365e9 298 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 101 112 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 ATC04_14155 ad0e630f09244700ced36d5c327365e9 298 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 21 241 33.907 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ATC04_14155 ad0e630f09244700ced36d5c327365e9 298 Gene3D G3DSA:3.40.1010.10 6 130 1.7E-35 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ATC04_14155 ad0e630f09244700ced36d5c327365e9 298 Gene3D G3DSA:3.30.950.10 131 247 1.8E-39 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 ATC04_14155 ad0e630f09244700ced36d5c327365e9 298 PIRSF PIRSF005917 10 295 1.8E-95 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ATC04_14155 ad0e630f09244700ced36d5c327365e9 298 SUPERFAMILY SSF53790 20 239 4.32E-73 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ATC04_14155 ad0e630f09244700ced36d5c327365e9 298 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 25 291 2.2E-70 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ATC04_15460 9acd9ffccdcaf2f8f76020349430425d 483 SUPERFAMILY SSF47323 343 481 8.5E-31 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_15460 9acd9ffccdcaf2f8f76020349430425d 483 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 240 261 1.3E-24 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ATC04_15460 9acd9ffccdcaf2f8f76020349430425d 483 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.3E-24 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ATC04_15460 9acd9ffccdcaf2f8f76020349430425d 483 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.3E-24 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ATC04_15460 9acd9ffccdcaf2f8f76020349430425d 483 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 209 227 1.3E-24 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ATC04_15460 9acd9ffccdcaf2f8f76020349430425d 483 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 329 7.4E-111 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 ATC04_15460 9acd9ffccdcaf2f8f76020349430425d 483 SMART SM00840 362 427 1.7E-10 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ATC04_15460 9acd9ffccdcaf2f8f76020349430425d 483 Gene3D G3DSA:1.20.120.640 323 481 1.7E-34 T 11-10-2018 ATC04_15460 9acd9ffccdcaf2f8f76020349430425d 483 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 480 7.2E-132 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 ATC04_15460 9acd9ffccdcaf2f8f76020349430425d 483 Pfam PF09190 DALR domain 363 415 8.7E-9 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ATC04_15460 9acd9ffccdcaf2f8f76020349430425d 483 Gene3D G3DSA:3.40.50.620 1 322 6.6E-115 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_15460 9acd9ffccdcaf2f8f76020349430425d 483 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 482 35.086 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 ATC04_15460 9acd9ffccdcaf2f8f76020349430425d 483 SUPERFAMILY SSF52374 4 328 1.9E-80 T 11-10-2018 ATC04_03955 6057c2e2916053f16a3a2297ba20e2d3 327 SUPERFAMILY SSF53822 39 318 2.22E-74 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ATC04_03955 6057c2e2916053f16a3a2297ba20e2d3 327 Gene3D G3DSA:3.40.50.2300 42 325 1.4E-95 T 11-10-2018 ATC04_03955 6057c2e2916053f16a3a2297ba20e2d3 327 Gene3D G3DSA:3.40.50.2300 145 279 1.4E-95 T 11-10-2018 ATC04_03955 6057c2e2916053f16a3a2297ba20e2d3 327 Pfam PF13407 Periplasmic binding protein domain 42 298 4.2E-62 T 11-10-2018 IPR025997 Periplasmic binding protein ATC04_09695 bf8c48c7f079be0ac0c90b4e03f173fa 375 PIRSF PIRSF006404 7 375 7.9E-60 T 11-10-2018 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS ATC04_09695 bf8c48c7f079be0ac0c90b4e03f173fa 375 SUPERFAMILY SSF54631 268 372 2.55E-7 T 11-10-2018 ATC04_11725 2ba963b7137b0d566e9c07d1453f3b2e 645 Pfam PF02720 Domain of unknown function (DUF222) 469 553 2.5E-7 T 11-10-2018 IPR003870 Domain of unknown function DUF222 ATC04_11725 2ba963b7137b0d566e9c07d1453f3b2e 645 SMART SM00507 544 596 2.3E-7 T 11-10-2018 IPR003615 HNH nuclease ATC04_16905 13ca499b7fea368c433fc3a420208904 207 SUPERFAMILY SSF57716 154 203 4.37E-10 T 11-10-2018 ATC04_16905 13ca499b7fea368c433fc3a420208904 207 PIRSF PIRSF035805 1 204 2.2E-45 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 ATC04_16905 13ca499b7fea368c433fc3a420208904 207 SUPERFAMILY SSF52540 2 153 1.15E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_16905 13ca499b7fea368c433fc3a420208904 207 Gene3D G3DSA:3.40.50.300 1 153 1.4E-21 T 11-10-2018 ATC04_16905 13ca499b7fea368c433fc3a420208904 207 Pfam PF00265 Thymidine kinase 2 198 4.3E-33 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 ATC04_14315 f741150c1b807bbd60bf59d5e84cb6bd 300 Gene3D G3DSA:3.40.50.10320 7 300 8.1E-77 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ATC04_14315 f741150c1b807bbd60bf59d5e84cb6bd 300 TIGRFAM TIGR03446 mycothiol_Mca: mycothiol conjugate amidase Mca 10 299 6.9E-132 T 11-10-2018 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 ATC04_14315 f741150c1b807bbd60bf59d5e84cb6bd 300 SUPERFAMILY SSF102588 9 299 4.71E-66 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ATC04_14315 f741150c1b807bbd60bf59d5e84cb6bd 300 Hamap MF_01482 Mycothiol S-conjugate amidase [mca]. 13 300 50.026 T 11-10-2018 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 ATC04_14315 f741150c1b807bbd60bf59d5e84cb6bd 300 Pfam PF02585 GlcNAc-PI de-N-acetylase 13 156 2.5E-24 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 ATC04_05290 4dc052e644190397cb54645d6e0f1270 203 Pfam PF00578 AhpC/TSA family 68 180 2.2E-17 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ATC04_05290 4dc052e644190397cb54645d6e0f1270 203 Gene3D G3DSA:3.40.30.10 62 200 2.4E-32 T 11-10-2018 ATC04_05290 4dc052e644190397cb54645d6e0f1270 203 SUPERFAMILY SSF52833 12 195 2.23E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_15665 fdf5b7a26f24221c24b672ecc3eeeae6 157 Pfam PF16259 Domain of unknown function (DUF4913) 43 135 1.6E-25 T 11-10-2018 IPR032584 Protein of unknown function DUF4913 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 PRINTS PR00359 B-class P450 signature 308 319 6.1E-32 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 PRINTS PR00359 B-class P450 signature 375 384 6.1E-32 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 PRINTS PR00359 B-class P450 signature 167 183 6.1E-32 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 PRINTS PR00359 B-class P450 signature 384 395 6.1E-32 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 PRINTS PR00359 B-class P450 signature 325 352 6.1E-32 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 PRINTS PR00359 B-class P450 signature 353 368 6.1E-32 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 PRINTS PR00359 B-class P450 signature 119 130 6.1E-32 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 PRINTS PR00385 P450 superfamily signature 384 395 2.5E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 PRINTS PR00385 P450 superfamily signature 375 384 2.5E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 PRINTS PR00385 P450 superfamily signature 308 319 2.5E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 PRINTS PR00385 P450 superfamily signature 273 290 2.5E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 Pfam PF00067 Cytochrome P450 243 399 4.5E-22 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 377 386 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 Gene3D G3DSA:1.10.630.10 15 442 1.8E-111 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_02145 cd11c33ec2727eb32f28bb74039b145c 444 SUPERFAMILY SSF48264 38 433 1.57E-80 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_05270 b5c3250ae79dfb644ce9650e05a91c80 78 SUPERFAMILY SSF52833 2 77 1.16E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_05270 b5c3250ae79dfb644ce9650e05a91c80 78 Gene3D G3DSA:3.40.30.10 1 77 5.7E-20 T 11-10-2018 ATC04_05270 b5c3250ae79dfb644ce9650e05a91c80 78 Pfam PF05768 Glutaredoxin-like domain (DUF836) 4 76 4.2E-14 T 11-10-2018 IPR008554 Glutaredoxin-like ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 302 5.0E-57 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 2.4E-25 T 11-10-2018 ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.4E-25 T 11-10-2018 ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 2.4E-25 T 11-10-2018 ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.4E-25 T 11-10-2018 ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 2.4E-25 T 11-10-2018 ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 Gene3D G3DSA:3.50.50.60 116 241 3.5E-102 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 SUPERFAMILY SSF55424 315 409 5.77E-23 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 SUPERFAMILY SSF51905 2 312 2.8E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 Gene3D G3DSA:3.50.50.60 8 303 3.5E-102 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 Gene3D G3DSA:3.30.390.30 323 410 3.2E-21 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.0E-16 T 11-10-2018 ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 5.0E-16 T 11-10-2018 ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 5.0E-16 T 11-10-2018 ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 173 5.0E-16 T 11-10-2018 ATC04_11660 7f8915ba67da3ff0635b288583b21eda 410 Pfam PF14759 Reductase C-terminal 323 409 2.8E-14 T 11-10-2018 IPR028202 Reductase, C-terminal ATC04_16090 270dda0d01b921daa4bfc9798ed70877 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 1.4E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_16090 270dda0d01b921daa4bfc9798ed70877 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 208 222 1.4E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_16090 270dda0d01b921daa4bfc9798ed70877 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 1.4E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_16090 270dda0d01b921daa4bfc9798ed70877 265 Gene3D G3DSA:3.40.50.1820 12 263 1.5E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_16090 270dda0d01b921daa4bfc9798ed70877 265 Pfam PF12146 Serine aminopeptidase, S33 40 245 1.5E-13 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 ATC04_16090 270dda0d01b921daa4bfc9798ed70877 265 SUPERFAMILY SSF53474 18 262 9.76E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_08240 1d7af97292b7378c6bf7a8fc2a5fc29d 313 Pfam PF10128 Glucose-6-phosphate dehydrogenase subunit 51 295 1.3E-78 T 11-10-2018 IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA ATC04_04430 75290f6992fdc0112f81a1f9f8246dd1 162 Gene3D G3DSA:1.10.10.10 2 142 6.0E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_04430 75290f6992fdc0112f81a1f9f8246dd1 162 SMART SM00347 27 129 4.8E-19 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04430 75290f6992fdc0112f81a1f9f8246dd1 162 Pfam PF01047 MarR family 35 93 2.1E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04430 75290f6992fdc0112f81a1f9f8246dd1 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.5E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04430 75290f6992fdc0112f81a1f9f8246dd1 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 2.5E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04430 75290f6992fdc0112f81a1f9f8246dd1 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 2.5E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_04430 75290f6992fdc0112f81a1f9f8246dd1 162 SUPERFAMILY SSF46785 9 141 2.6E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_13245 138a3a99bea1ad7aef2a3c59d63a8d68 600 Gene3D G3DSA:3.10.105.10 353 566 1.3E-26 T 11-10-2018 ATC04_13245 138a3a99bea1ad7aef2a3c59d63a8d68 600 PIRSF PIRSF002741 6 221 2.0E-8 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ATC04_13245 138a3a99bea1ad7aef2a3c59d63a8d68 600 PIRSF PIRSF002741 247 600 4.7E-33 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ATC04_13245 138a3a99bea1ad7aef2a3c59d63a8d68 600 SUPERFAMILY SSF53850 80 592 3.08E-62 T 11-10-2018 ATC04_13245 138a3a99bea1ad7aef2a3c59d63a8d68 600 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 118 504 1.9E-41 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ATC04_13245 138a3a99bea1ad7aef2a3c59d63a8d68 600 Gene3D G3DSA:3.40.190.10 38 352 4.7E-35 T 11-10-2018 ATC04_03205 91e20cbc571a9bfdc38611892ec4ae5f 458 Pfam PF07690 Major Facilitator Superfamily 54 412 1.1E-15 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_03205 91e20cbc571a9bfdc38611892ec4ae5f 458 SUPERFAMILY SSF103473 30 449 6.28E-37 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_03205 91e20cbc571a9bfdc38611892ec4ae5f 458 Gene3D G3DSA:1.20.1250.20 233 455 2.3E-61 T 11-10-2018 ATC04_03205 91e20cbc571a9bfdc38611892ec4ae5f 458 Gene3D G3DSA:1.20.1250.20 12 232 9.8E-65 T 11-10-2018 ATC04_10395 6c96fb7be609fdfd45465f1d3abecee3 209 PIRSF PIRSF006324 1 209 1.1E-42 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ATC04_10395 6c96fb7be609fdfd45465f1d3abecee3 209 Pfam PF01810 LysE type translocator 17 207 4.1E-33 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ATC04_01980 ef24381f20fad3b5ce606a7669463e58 249 Gene3D G3DSA:3.40.50.12500 1 240 4.8E-79 T 11-10-2018 ATC04_11645 031a591d0f5d706571ed8fe63a57896a 212 Gene3D G3DSA:1.10.10.10 2 95 7.1E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_11645 031a591d0f5d706571ed8fe63a57896a 212 Pfam PF12840 Helix-turn-helix domain 4 58 2.2E-9 T 11-10-2018 ATC04_11645 031a591d0f5d706571ed8fe63a57896a 212 SUPERFAMILY SSF46785 4 189 2.73E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_16385 3c090e3cf2e7b778c299ee23ae5d3318 477 Pfam PF00324 Amino acid permease 16 455 3.5E-99 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ATC04_16385 3c090e3cf2e7b778c299ee23ae5d3318 477 PIRSF PIRSF006060 3 472 3.1E-71 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_16385 3c090e3cf2e7b778c299ee23ae5d3318 477 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ATC04_16385 3c090e3cf2e7b778c299ee23ae5d3318 477 Gene3D G3DSA:1.20.1740.10 8 461 2.0E-59 T 11-10-2018 ATC04_01730 c3c32a1155bd373f709544eddb02005f 405 Gene3D G3DSA:3.30.9.10 104 336 3.5E-131 T 11-10-2018 ATC04_01730 c3c32a1155bd373f709544eddb02005f 405 SUPERFAMILY SSF51905 22 394 6.69E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_01730 c3c32a1155bd373f709544eddb02005f 405 Pfam PF01266 FAD dependent oxidoreductase 23 369 5.5E-58 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATC04_01730 c3c32a1155bd373f709544eddb02005f 405 SUPERFAMILY SSF54373 251 328 2.35E-6 T 11-10-2018 ATC04_01730 c3c32a1155bd373f709544eddb02005f 405 Gene3D G3DSA:3.50.50.60 23 377 3.5E-131 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_01730 c3c32a1155bd373f709544eddb02005f 405 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 12 397 6.7E-191 T 11-10-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 ATC04_16680 685b47f3337255c50b8e0e6858ed1ab2 472 Pfam PF00296 Luciferase-like monooxygenase 39 397 3.3E-58 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ATC04_16680 685b47f3337255c50b8e0e6858ed1ab2 472 Gene3D G3DSA:3.20.20.30 9 468 1.4E-148 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_16680 685b47f3337255c50b8e0e6858ed1ab2 472 SUPERFAMILY SSF51679 10 449 4.71E-129 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_16680 685b47f3337255c50b8e0e6858ed1ab2 472 PIRSF PIRSF000337 10 459 5.4E-139 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 ATC04_16680 685b47f3337255c50b8e0e6858ed1ab2 472 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 15 445 2.5E-163 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 ATC04_11275 160416e57c2a3a203476afd1e21bfe3a 270 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 185 202 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site ATC04_11275 160416e57c2a3a203476afd1e21bfe3a 270 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 218 4.4E-21 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ATC04_11925 f1a20850d5d43270b8e3124d94ec7241 285 Pfam PF00950 ABC 3 transport family 22 271 4.2E-42 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 ATC04_11925 f1a20850d5d43270b8e3124d94ec7241 285 SUPERFAMILY SSF81345 11 270 1.44E-31 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_03610 3fef27cf14050dc9f2d1ac1ab790c33f 400 Gene3D G3DSA:3.10.580.10 249 369 2.0E-5 T 11-10-2018 ATC04_03610 3fef27cf14050dc9f2d1ac1ab790c33f 400 SUPERFAMILY SSF52540 2 239 1.14E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03610 3fef27cf14050dc9f2d1ac1ab790c33f 400 Gene3D G3DSA:3.40.50.300 1 239 2.3E-70 T 11-10-2018 ATC04_03610 3fef27cf14050dc9f2d1ac1ab790c33f 400 Pfam PF00005 ABC transporter 19 163 1.3E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_03610 3fef27cf14050dc9f2d1ac1ab790c33f 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 14 363 4.6E-98 T 11-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 ATC04_03610 3fef27cf14050dc9f2d1ac1ab790c33f 400 SMART SM00382 26 219 1.2E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_03610 3fef27cf14050dc9f2d1ac1ab790c33f 400 SUPERFAMILY SSF54631 249 362 1.21E-8 T 11-10-2018 ATC04_03610 3fef27cf14050dc9f2d1ac1ab790c33f 400 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_14085 80e6fbbffb7378df1e8599605dec75ec 447 Pfam PF14024 Protein of unknown function (DUF4240) 274 397 2.9E-32 T 11-10-2018 IPR025334 Domain of unknown function (DUF4240 ATC04_04910 9e7100dc0c00ba4d54b193e829894f1b 498 SUPERFAMILY SSF56024 282 483 5.16E-44 T 11-10-2018 ATC04_04910 9e7100dc0c00ba4d54b193e829894f1b 498 Pfam PF13396 Phospholipase_D-nuclease N-terminal 37 64 8.7E-8 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal ATC04_04910 9e7100dc0c00ba4d54b193e829894f1b 498 Pfam PF13091 PLD-like domain 139 288 1.5E-14 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ATC04_04910 9e7100dc0c00ba4d54b193e829894f1b 498 Pfam PF13091 PLD-like domain 339 460 1.1E-23 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ATC04_04910 9e7100dc0c00ba4d54b193e829894f1b 498 Gene3D G3DSA:3.30.870.10 118 313 1.8E-37 T 11-10-2018 ATC04_04910 9e7100dc0c00ba4d54b193e829894f1b 498 SMART SM00155 411 438 6.2E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ATC04_04910 9e7100dc0c00ba4d54b193e829894f1b 498 SMART SM00155 225 252 0.15 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ATC04_04910 9e7100dc0c00ba4d54b193e829894f1b 498 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 16 495 1.2E-102 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 ATC04_04910 9e7100dc0c00ba4d54b193e829894f1b 498 SUPERFAMILY SSF56024 107 326 2.09E-43 T 11-10-2018 ATC04_04910 9e7100dc0c00ba4d54b193e829894f1b 498 Gene3D G3DSA:3.30.870.10 316 498 3.3E-27 T 11-10-2018 ATC04_00275 9f4bc4e96f11ab027e31dc8da849ca5d 400 SUPERFAMILY SSF58113 37 142 8.24E-5 T 11-10-2018 ATC04_00275 9f4bc4e96f11ab027e31dc8da849ca5d 400 Pfam PF02646 RmuC family 104 390 2.1E-76 T 11-10-2018 IPR003798 DNA recombination RmuC ATC04_18365 e227902b2a10ec856154fb287ce7a77e 102 Gene3D G3DSA:3.40.190.10 63 98 2.8E-5 T 11-10-2018 ATC04_18365 e227902b2a10ec856154fb287ce7a77e 102 SUPERFAMILY SSF53850 2 98 1.36E-7 T 11-10-2018 ATC04_18365 e227902b2a10ec856154fb287ce7a77e 102 Gene3D G3DSA:3.40.190.10 1 62 2.8E-5 T 11-10-2018 ATC04_18365 e227902b2a10ec856154fb287ce7a77e 102 Pfam PF13531 Bacterial extracellular solute-binding protein 2 99 1.4E-6 T 11-10-2018 ATC04_09705 71913339521b0898ec85944fb129cbf2 302 SUPERFAMILY SSF159659 17 270 1.44E-70 T 11-10-2018 ATC04_09705 71913339521b0898ec85944fb129cbf2 302 PIRSF PIRSF028754 14 298 1.6E-79 T 11-10-2018 IPR008492 Protein of unknown function DUF774 ATC04_09705 71913339521b0898ec85944fb129cbf2 302 Pfam PF09754 PAC2 family 30 246 6.1E-38 T 11-10-2018 IPR019151 Proteasome assembly chaperone 2 ATC04_09705 71913339521b0898ec85944fb129cbf2 302 Gene3D G3DSA:1.10.287.100 228 266 1.8E-81 T 11-10-2018 ATC04_09705 71913339521b0898ec85944fb129cbf2 302 Gene3D G3DSA:3.40.50.10900 25 227 1.8E-81 T 11-10-2018 IPR038389 Proteasome assembly chaperone 2 superfamily ATC04_14245 67204a88d3f2100620aa697d22a5b98c 202 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 48 55 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATC04_14245 67204a88d3f2100620aa697d22a5b98c 202 Pfam PF00484 Carbonic anhydrase 43 190 7.4E-37 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATC04_14245 67204a88d3f2100620aa697d22a5b98c 202 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 85 105 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATC04_14245 67204a88d3f2100620aa697d22a5b98c 202 Gene3D G3DSA:3.40.1050.10 1 200 3.1E-68 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 ATC04_14245 67204a88d3f2100620aa697d22a5b98c 202 SUPERFAMILY SSF53056 2 194 4.58E-50 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 ATC04_14245 67204a88d3f2100620aa697d22a5b98c 202 SMART SM00947 36 195 8.4E-43 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATC04_10885 2b03c1ab284b189bc9ffe157f5c458a9 379 Gene3D G3DSA:3.40.50.2000 6 169 4.0E-10 T 11-10-2018 ATC04_10885 2b03c1ab284b189bc9ffe157f5c458a9 379 Pfam PF00534 Glycosyl transferases group 1 191 334 1.4E-8 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ATC04_10885 2b03c1ab284b189bc9ffe157f5c458a9 379 SUPERFAMILY SSF53756 6 360 1.1E-33 T 11-10-2018 ATC04_10885 2b03c1ab284b189bc9ffe157f5c458a9 379 Gene3D G3DSA:3.40.50.2000 178 338 9.9E-14 T 11-10-2018 ATC04_10885 2b03c1ab284b189bc9ffe157f5c458a9 379 Pfam PF09314 Domain of unknown function (DUF1972) 111 169 1.2E-10 T 11-10-2018 IPR015393 Domain of unknown function DUF1972 ATC04_12300 a8651308da2a8da1cd6e0552faa276dd 285 Gene3D G3DSA:3.40.50.300 26 281 4.9E-82 T 11-10-2018 ATC04_12300 a8651308da2a8da1cd6e0552faa276dd 285 SUPERFAMILY SSF52540 30 279 1.88E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12300 a8651308da2a8da1cd6e0552faa276dd 285 Pfam PF13614 AAA domain 31 206 3.2E-62 T 11-10-2018 IPR025669 AAA domain ATC04_10555 4e77d2090dae2ce4cb1afe6dc7f08668 356 SUPERFAMILY SSF53756 9 285 7.85E-6 T 11-10-2018 ATC04_10555 4e77d2090dae2ce4cb1afe6dc7f08668 356 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 101 270 3.5E-8 T 11-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 ATC04_10555 4e77d2090dae2ce4cb1afe6dc7f08668 356 Gene3D G3DSA:3.40.50.12580 147 273 1.6E-6 T 11-10-2018 ATC04_10145 1a767e3906e291d17162c84cf32c0c4a 299 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 29 291 5.0E-51 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ATC04_10145 1a767e3906e291d17162c84cf32c0c4a 299 Gene3D G3DSA:3.40.1390.30 31 266 7.3E-67 T 11-10-2018 ATC04_10145 1a767e3906e291d17162c84cf32c0c4a 299 SUPERFAMILY SSF102705 26 295 2.62E-80 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily ATC04_10145 1a767e3906e291d17162c84cf32c0c4a 299 Gene3D G3DSA:3.40.1390.30 124 254 7.3E-67 T 11-10-2018 ATC04_10145 1a767e3906e291d17162c84cf32c0c4a 299 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 30 273 1.3E-70 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ATC04_03725 08695cf940807d2006e15341eb9867b3 456 Pfam PF02386 Cation transport protein 48 433 1.8E-57 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 ATC04_17440 ee14013223b9f25a9cf3543c12a251d5 377 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 88 371 5.6E-82 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 ATC04_17440 ee14013223b9f25a9cf3543c12a251d5 377 Gene3D G3DSA:1.10.3720.10 144 372 4.1E-33 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_17440 ee14013223b9f25a9cf3543c12a251d5 377 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 168 375 3.1E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_17440 ee14013223b9f25a9cf3543c12a251d5 377 SUPERFAMILY SSF161098 96 364 6.54E-38 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_10445 27c9524a697b34056aa146edb2169b88 289 Gene3D G3DSA:3.10.180.10 174 289 2.5E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_10445 27c9524a697b34056aa146edb2169b88 289 ProSitePatterns PS00934 Glyoxalase I signature 1. 178 199 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 ATC04_10445 27c9524a697b34056aa146edb2169b88 289 SUPERFAMILY SSF54593 14 159 6.31E-30 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_10445 27c9524a697b34056aa146edb2169b88 289 SUPERFAMILY SSF54593 176 287 5.23E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_10445 27c9524a697b34056aa146edb2169b88 289 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 128 2.5E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_10445 27c9524a697b34056aa146edb2169b88 289 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 176 270 1.1E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_10445 27c9524a697b34056aa146edb2169b88 289 Gene3D G3DSA:3.10.180.10 14 138 3.3E-19 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_16110 264d02799bdbad4bf599c7ca31380a0c 114 Pfam PF03551 Transcriptional regulator PadR-like family 20 92 8.8E-16 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal ATC04_16110 264d02799bdbad4bf599c7ca31380a0c 114 SUPERFAMILY SSF46785 12 109 4.72E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_16110 264d02799bdbad4bf599c7ca31380a0c 114 Gene3D G3DSA:1.10.10.10 8 114 1.9E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_13495 c6568a49339283b4bdde3715839f4551 407 PIRSF PIRSF004810 1 406 3.2E-118 T 11-10-2018 IPR014047 Chromate transporter, long chain ATC04_13495 c6568a49339283b4bdde3715839f4551 407 Pfam PF02417 Chromate transporter 233 399 1.7E-35 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 ATC04_13495 c6568a49339283b4bdde3715839f4551 407 Pfam PF02417 Chromate transporter 13 178 2.9E-32 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 ATC04_13495 c6568a49339283b4bdde3715839f4551 407 TIGRFAM TIGR00937 2A51: chromate efflux transporter 19 399 1.1E-95 T 11-10-2018 IPR014047 Chromate transporter, long chain ATC04_01135 f153b85bae4175a73541f401d07b8a67 467 ProSitePatterns PS00218 Amino acid permeases signature. 34 64 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ATC04_01135 f153b85bae4175a73541f401d07b8a67 467 PIRSF PIRSF006060 1 460 2.1E-61 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_01135 f153b85bae4175a73541f401d07b8a67 467 Pfam PF00324 Amino acid permease 9 440 2.9E-96 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ATC04_01135 f153b85bae4175a73541f401d07b8a67 467 Gene3D G3DSA:1.20.1740.10 2 451 2.9E-61 T 11-10-2018 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 7 469 8.9E-222 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 Pfam PF00330 Aconitase family (aconitate hydratase) 12 467 3.0E-157 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 ProSitePatterns PS00450 Aconitase family signature 1. 349 365 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 Gene3D G3DSA:3.30.499.20 9 296 8.0E-101 T 11-10-2018 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 ProSitePatterns PS01244 Aconitase family signature 2. 409 422 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 Gene3D G3DSA:3.30.499.10 340 481 6.3E-48 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 6 476 59.142 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 PRINTS PR00415 Aconitase family signature 205 218 3.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 PRINTS PR00415 Aconitase family signature 92 105 3.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 PRINTS PR00415 Aconitase family signature 353 364 3.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 PRINTS PR00415 Aconitase family signature 143 158 3.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 PRINTS PR00415 Aconitase family signature 409 422 3.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 PRINTS PR00415 Aconitase family signature 219 232 3.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 PRINTS PR00415 Aconitase family signature 296 310 3.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 PRINTS PR00415 Aconitase family signature 118 126 3.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 PRINTS PR00415 Aconitase family signature 129 142 3.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ATC04_10685 16cee8ef5f4074c7ad3146415af017f2 482 SUPERFAMILY SSF53732 6 475 4.45E-160 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ATC04_13015 e82674b93b341fc1050b21c4a56e0d40 169 Pfam PF09900 Predicted membrane protein (DUF2127) 15 154 1.3E-30 T 11-10-2018 IPR021125 Protein of unknown function DUF2127 ATC04_13015 e82674b93b341fc1050b21c4a56e0d40 169 PIRSF PIRSF034455 1 164 1.1E-45 T 11-10-2018 IPR014591 Uncharacterised conserved protein UCP034455 ATC04_03350 b2aef7af9879bb77450a2de19833e1f1 574 Gene3D G3DSA:3.40.50.300 203 381 9.0E-13 T 11-10-2018 ATC04_03350 b2aef7af9879bb77450a2de19833e1f1 574 Gene3D G3DSA:3.40.50.300 421 563 4.4E-6 T 11-10-2018 ATC04_03350 b2aef7af9879bb77450a2de19833e1f1 574 SUPERFAMILY SSF52540 210 542 4.77E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_03350 b2aef7af9879bb77450a2de19833e1f1 574 Pfam PF08378 Nuclease-related domain 17 113 1.0E-13 T 11-10-2018 IPR011528 Nuclease-related domain, NERD ATC04_11840 599a9a5e284da025c1db83ce9955eb84 732 TIGRFAM TIGR00767 rho: transcription termination factor Rho 21 725 1.1E-187 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ATC04_11840 599a9a5e284da025c1db83ce9955eb84 732 SMART SM00382 478 663 1.5E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_11840 599a9a5e284da025c1db83ce9955eb84 732 Gene3D G3DSA:1.10.720.10 21 61 5.3E-5 T 11-10-2018 ATC04_11840 599a9a5e284da025c1db83ce9955eb84 732 SMART SM00357 360 421 2.4E-5 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ATC04_11840 599a9a5e284da025c1db83ce9955eb84 732 Gene3D G3DSA:3.40.50.300 441 725 2.5E-123 T 11-10-2018 ATC04_11840 599a9a5e284da025c1db83ce9955eb84 732 Pfam PF07497 Rho termination factor, RNA-binding domain 360 436 1.0E-26 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 ATC04_11840 599a9a5e284da025c1db83ce9955eb84 732 SUPERFAMILY SSF52540 396 679 1.33E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11840 599a9a5e284da025c1db83ce9955eb84 732 Pfam PF07498 Rho termination factor, N-terminal domain 23 56 2.9E-9 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 ATC04_11840 599a9a5e284da025c1db83ce9955eb84 732 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 466 671 1.1E-21 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_11840 599a9a5e284da025c1db83ce9955eb84 732 SMART SM00959 22 62 1.4E-8 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 ATC04_11840 599a9a5e284da025c1db83ce9955eb84 732 Hamap MF_01884 Transcription termination factor Rho [rho]. 349 727 192.698 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ATC04_14810 5645cfe0cc2e1fa7f00304e7f25555fa 362 Pfam PF00589 Phage integrase family 146 340 3.0E-22 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATC04_14810 5645cfe0cc2e1fa7f00304e7f25555fa 362 Gene3D G3DSA:1.10.443.10 155 348 3.3E-32 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ATC04_14810 5645cfe0cc2e1fa7f00304e7f25555fa 362 SUPERFAMILY SSF56349 23 348 8.54E-33 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATC04_10930 07402dde19e29932a765027d4299a3ad 292 SUPERFAMILY SSF53448 7 128 1.69E-15 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_10930 07402dde19e29932a765027d4299a3ad 292 Gene3D G3DSA:3.90.550.10 4 237 2.9E-15 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_10930 07402dde19e29932a765027d4299a3ad 292 Pfam PF00535 Glycosyl transferase family 2 8 135 6.5E-12 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATC04_12460 8fab284944161234b040745388b841f3 183 SUPERFAMILY SSF52949 2 174 2.35E-51 T 11-10-2018 ATC04_12460 8fab284944161234b040745388b841f3 183 SMART SM00506 2 136 1.9E-39 T 11-10-2018 IPR002589 Macro domain ATC04_12460 8fab284944161234b040745388b841f3 183 Pfam PF01661 Macro domain 19 136 3.7E-31 T 11-10-2018 IPR002589 Macro domain ATC04_12460 8fab284944161234b040745388b841f3 183 Gene3D G3DSA:3.40.220.10 1 175 6.4E-60 T 11-10-2018 ATC04_03155 5563540f3b8af6b4c0060d2ef8f00b6c 275 Pfam PF02625 XdhC and CoxI family 10 67 1.5E-15 T 11-10-2018 IPR003777 XdhC- CoxI ATC04_03155 5563540f3b8af6b4c0060d2ef8f00b6c 275 Gene3D G3DSA:3.40.50.720 108 261 7.3E-34 T 11-10-2018 ATC04_03155 5563540f3b8af6b4c0060d2ef8f00b6c 275 SUPERFAMILY SSF51735 107 195 5.1E-7 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_03155 5563540f3b8af6b4c0060d2ef8f00b6c 275 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 17 258 3.7E-71 T 11-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC ATC04_03155 5563540f3b8af6b4c0060d2ef8f00b6c 275 Pfam PF13478 XdhC Rossmann domain 109 257 2.2E-34 T 11-10-2018 IPR027051 XdhC Rossmann domain ATC04_09865 8bbcd5444376ea325a6cb1f1dced2da3 324 SMART SM00829 10 320 0.0029 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATC04_09865 8bbcd5444376ea325a6cb1f1dced2da3 324 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 21 322 4.6E-108 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI ATC04_09865 8bbcd5444376ea325a6cb1f1dced2da3 324 Gene3D G3DSA:3.90.180.10 21 321 2.1E-97 T 11-10-2018 ATC04_09865 8bbcd5444376ea325a6cb1f1dced2da3 324 Gene3D G3DSA:3.40.50.720 121 290 2.1E-97 T 11-10-2018 ATC04_09865 8bbcd5444376ea325a6cb1f1dced2da3 324 SUPERFAMILY SSF51735 114 286 2.98E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_09865 8bbcd5444376ea325a6cb1f1dced2da3 324 SUPERFAMILY SSF50129 1 135 1.28E-28 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_09865 8bbcd5444376ea325a6cb1f1dced2da3 324 Pfam PF00107 Zinc-binding dehydrogenase 154 271 1.3E-12 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATC04_15110 6c88d821e40d79805b646e9690c45a44 488 SUPERFAMILY SSF53720 7 486 2.09E-145 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_15110 6c88d821e40d79805b646e9690c45a44 488 Gene3D G3DSA:3.40.605.10 40 481 2.3E-143 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_15110 6c88d821e40d79805b646e9690c45a44 488 Pfam PF00171 Aldehyde dehydrogenase family 21 484 2.4E-141 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_15110 6c88d821e40d79805b646e9690c45a44 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ATC04_15110 6c88d821e40d79805b646e9690c45a44 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ATC04_15110 6c88d821e40d79805b646e9690c45a44 488 Gene3D G3DSA:3.40.309.10 259 452 2.3E-143 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_10895 1cf06ebca51c4349609479aa02045c15 731 Gene3D G3DSA:1.10.10.10 635 731 1.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_10895 1cf06ebca51c4349609479aa02045c15 731 Pfam PF00196 Bacterial regulatory proteins, luxR family 673 727 1.5E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10895 1cf06ebca51c4349609479aa02045c15 731 ProSitePatterns PS00622 LuxR-type HTH domain signature. 688 715 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10895 1cf06ebca51c4349609479aa02045c15 731 SUPERFAMILY SSF52540 12 214 7.23E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10895 1cf06ebca51c4349609479aa02045c15 731 SUPERFAMILY SSF46894 664 729 3.74E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_10895 1cf06ebca51c4349609479aa02045c15 731 SMART SM00421 671 728 2.5E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10895 1cf06ebca51c4349609479aa02045c15 731 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 674 688 2.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10895 1cf06ebca51c4349609479aa02045c15 731 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 704 716 2.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10895 1cf06ebca51c4349609479aa02045c15 731 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 688 704 2.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_02945 e554d69ab3479cd11a69225fffe3232a 189 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 24 158 1.5E-24 T 11-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 ATC04_16695 bd461f51999743b2fb1b7df80109164c 340 SMART SM00062 40 254 0.0057 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ATC04_16695 bd461f51999743b2fb1b7df80109164c 340 Gene3D G3DSA:3.40.190.10 120 218 1.7E-63 T 11-10-2018 ATC04_16695 bd461f51999743b2fb1b7df80109164c 340 Gene3D G3DSA:3.40.190.10 42 291 1.7E-63 T 11-10-2018 ATC04_16695 bd461f51999743b2fb1b7df80109164c 340 Pfam PF09084 NMT1/THI5 like 56 257 4.2E-28 T 11-10-2018 IPR015168 SsuA/THI5-like ATC04_16695 bd461f51999743b2fb1b7df80109164c 340 SUPERFAMILY SSF53850 40 264 3.23E-49 T 11-10-2018 ATC04_16695 bd461f51999743b2fb1b7df80109164c 340 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 42 322 2.6E-62 T 11-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 ATC04_16695 bd461f51999743b2fb1b7df80109164c 340 Gene3D G3DSA:1.10.8.450 249 282 1.7E-63 T 11-10-2018 ATC04_06600 4bdeb95e47870971bf9c5c2c6efa052d 146 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 144 3.7E-60 T 11-10-2018 IPR019884 YtoQ family protein ATC04_06600 4bdeb95e47870971bf9c5c2c6efa052d 146 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 144 4.8E-63 T 11-10-2018 IPR019884 YtoQ family protein ATC04_12810 cf483ed0537f25466abd4ef472ccfa29 288 SUPERFAMILY SSF53223 4 108 2.19E-26 T 11-10-2018 ATC04_12810 cf483ed0537f25466abd4ef472ccfa29 288 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 96 1.2E-22 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ATC04_12810 cf483ed0537f25466abd4ef472ccfa29 288 Gene3D G3DSA:3.40.50.10860 10 267 4.1E-77 T 11-10-2018 ATC04_12810 cf483ed0537f25466abd4ef472ccfa29 288 SUPERFAMILY SSF51735 109 283 1.91E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_12810 cf483ed0537f25466abd4ef472ccfa29 288 Gene3D G3DSA:3.40.50.720 107 251 4.1E-77 T 11-10-2018 ATC04_02595 a7ba0e8d34c1b1575cbe05e1305a1d90 570 Gene3D G3DSA:3.40.50.12780 4 416 1.3E-68 T 11-10-2018 ATC04_02595 a7ba0e8d34c1b1575cbe05e1305a1d90 570 Pfam PF00501 AMP-binding enzyme 26 419 1.6E-58 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_02595 a7ba0e8d34c1b1575cbe05e1305a1d90 570 Gene3D G3DSA:3.30.300.310 417 519 1.5E-11 T 11-10-2018 ATC04_02595 a7ba0e8d34c1b1575cbe05e1305a1d90 570 SUPERFAMILY SSF56801 8 517 2.62E-88 T 11-10-2018 ATC04_02595 a7ba0e8d34c1b1575cbe05e1305a1d90 570 ProSitePatterns PS00455 Putative AMP-binding domain signature. 167 178 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_16915 fbf2b115976e038dd77a1d9878f54eac 460 Pfam PF00324 Amino acid permease 24 431 1.1E-84 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ATC04_16915 fbf2b115976e038dd77a1d9878f54eac 460 Gene3D G3DSA:1.20.1740.10 15 459 1.3E-58 T 11-10-2018 ATC04_16915 fbf2b115976e038dd77a1d9878f54eac 460 PIRSF PIRSF006060 2 460 1.1E-60 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_16915 fbf2b115976e038dd77a1d9878f54eac 460 ProSitePatterns PS00218 Amino acid permeases signature. 48 78 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ATC04_08940 78f82141c5d93e1f1642dbb49cf7a4c2 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ATC04_08940 78f82141c5d93e1f1642dbb49cf7a4c2 275 SUPERFAMILY SSF51430 6 266 1.96E-77 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ATC04_08940 78f82141c5d93e1f1642dbb49cf7a4c2 275 Pfam PF00248 Aldo/keto reductase family 18 260 3.2E-43 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain ATC04_08940 78f82141c5d93e1f1642dbb49cf7a4c2 275 PIRSF PIRSF000097 1 267 8.0E-64 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATC04_08940 78f82141c5d93e1f1642dbb49cf7a4c2 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ATC04_08940 78f82141c5d93e1f1642dbb49cf7a4c2 275 Gene3D G3DSA:3.20.20.100 1 273 9.6E-90 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ATC04_08940 78f82141c5d93e1f1642dbb49cf7a4c2 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 9.7E-39 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATC04_08940 78f82141c5d93e1f1642dbb49cf7a4c2 275 PRINTS PR00069 Aldo-keto reductase signature 158 187 9.7E-39 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATC04_08940 78f82141c5d93e1f1642dbb49cf7a4c2 275 PRINTS PR00069 Aldo-keto reductase signature 93 111 9.7E-39 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATC04_08940 78f82141c5d93e1f1642dbb49cf7a4c2 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 9.7E-39 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATC04_08940 78f82141c5d93e1f1642dbb49cf7a4c2 275 PRINTS PR00069 Aldo-keto reductase signature 125 142 9.7E-39 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATC04_01010 31e39a8b0840a0c11f9e5f3b5614cbbf 118 Pfam PF00576 HIUase/Transthyretin family 11 117 3.2E-37 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ATC04_01010 31e39a8b0840a0c11f9e5f3b5614cbbf 118 PRINTS PR00189 Transthyretin signature 96 118 3.7E-5 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ATC04_01010 31e39a8b0840a0c11f9e5f3b5614cbbf 118 PRINTS PR00189 Transthyretin signature 10 30 3.7E-5 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ATC04_01010 31e39a8b0840a0c11f9e5f3b5614cbbf 118 Gene3D G3DSA:2.60.40.180 6 118 2.0E-41 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ATC04_01010 31e39a8b0840a0c11f9e5f3b5614cbbf 118 SUPERFAMILY SSF49472 6 118 6.93E-40 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ATC04_01010 31e39a8b0840a0c11f9e5f3b5614cbbf 118 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 9 118 1.1E-40 T 11-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ATC04_15060 60a01f1dae1814034714add9359e1222 835 Pfam PF02687 FtsX-like permease family 293 387 3.3E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ATC04_15060 60a01f1dae1814034714add9359e1222 835 Pfam PF02687 FtsX-like permease family 736 828 3.4E-14 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ATC04_15060 60a01f1dae1814034714add9359e1222 835 Pfam PF12704 MacB-like periplasmic core domain 19 227 7.6E-12 T 11-10-2018 IPR025857 MacB-like periplasmic core domain ATC04_07075 8ce5eddfad642b394683d67fd5e93cfe 265 Gene3D G3DSA:3.40.50.620 1 263 2.4E-68 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_07075 8ce5eddfad642b394683d67fd5e93cfe 265 Pfam PF01012 Electron transfer flavoprotein domain 29 212 1.5E-33 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_07075 8ce5eddfad642b394683d67fd5e93cfe 265 SUPERFAMILY SSF52402 1 260 3.49E-57 T 11-10-2018 ATC04_07075 8ce5eddfad642b394683d67fd5e93cfe 265 PIRSF PIRSF000090 1 265 4.0E-65 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 ATC04_07075 8ce5eddfad642b394683d67fd5e93cfe 265 SMART SM00893 23 218 5.0E-36 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_05285 e5fe92d8bdb6a0c08bf6b38534e25ecb 220 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 203 1.8E-29 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_05285 e5fe92d8bdb6a0c08bf6b38534e25ecb 220 Gene3D G3DSA:3.40.50.1240 4 212 5.8E-27 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_05285 e5fe92d8bdb6a0c08bf6b38534e25ecb 220 SMART SM00855 5 165 1.8E-15 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_05285 e5fe92d8bdb6a0c08bf6b38534e25ecb 220 SUPERFAMILY SSF53254 5 205 2.22E-33 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_15335 7bab58443d647a833478866a2ed06c85 224 Gene3D G3DSA:3.40.470.10 2 222 2.3E-74 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATC04_15335 7bab58443d647a833478866a2ed06c85 224 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 8 220 32.244 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATC04_15335 7bab58443d647a833478866a2ed06c85 224 Pfam PF03167 Uracil DNA glycosylase superfamily 55 207 9.4E-18 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATC04_15335 7bab58443d647a833478866a2ed06c85 224 SMART SM00987 50 209 7.7E-24 T 11-10-2018 ATC04_15335 7bab58443d647a833478866a2ed06c85 224 SMART SM00986 50 209 7.7E-24 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATC04_15335 7bab58443d647a833478866a2ed06c85 224 SUPERFAMILY SSF52141 7 221 1.59E-65 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATC04_15335 7bab58443d647a833478866a2ed06c85 224 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATC04_13130 3b3930ce71ac57189572d7ccd32422b0 362 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 37 297 1.6E-35 T 11-10-2018 IPR017039 Virulence factor BrkB ATC04_13130 3b3930ce71ac57189572d7ccd32422b0 362 Pfam PF03631 Virulence factor BrkB 43 299 1.4E-59 T 11-10-2018 IPR017039 Virulence factor BrkB ATC04_13130 3b3930ce71ac57189572d7ccd32422b0 362 PIRSF PIRSF035875 13 319 4.6E-77 T 11-10-2018 IPR017039 Virulence factor BrkB ATC04_02880 84e62aab33f0f4789d156f96c7358259 276 Pfam PF04012 PspA/IM30 family 6 237 5.4E-35 T 11-10-2018 IPR007157 PspA/IM30 ATC04_10605 5b36b24d844c451e3258fb571ee5a5b7 282 PRINTS PR00164 ABC-2 type transport system membrane protein signature 84 106 1.5E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ATC04_10605 5b36b24d844c451e3258fb571ee5a5b7 282 PRINTS PR00164 ABC-2 type transport system membrane protein signature 54 75 1.5E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ATC04_10605 5b36b24d844c451e3258fb571ee5a5b7 282 PRINTS PR00164 ABC-2 type transport system membrane protein signature 160 184 1.5E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ATC04_10605 5b36b24d844c451e3258fb571ee5a5b7 282 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 1.5E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ATC04_10605 5b36b24d844c451e3258fb571ee5a5b7 282 Pfam PF01061 ABC-2 type transporter 37 241 1.6E-19 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ATC04_01030 95d0a3c8e4dfa09bcc53646997dcfd4d 537 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 281 477 8.1E-26 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 ATC04_01030 95d0a3c8e4dfa09bcc53646997dcfd4d 537 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 20 244 8.8E-13 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 ATC04_01030 95d0a3c8e4dfa09bcc53646997dcfd4d 537 Gene3D G3DSA:3.30.420.40 16 268 1.5E-34 T 11-10-2018 ATC04_01030 95d0a3c8e4dfa09bcc53646997dcfd4d 537 SUPERFAMILY SSF53067 20 243 5.28E-27 T 11-10-2018 ATC04_01030 95d0a3c8e4dfa09bcc53646997dcfd4d 537 Gene3D G3DSA:3.30.420.40 269 533 2.4E-15 T 11-10-2018 ATC04_01030 95d0a3c8e4dfa09bcc53646997dcfd4d 537 SUPERFAMILY SSF53067 278 524 4.32E-11 T 11-10-2018 ATC04_05560 d3453efece1295fef71f0c61f802b37c 535 SUPERFAMILY SSF161070 17 504 2.22E-135 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 ATC04_05560 d3453efece1295fef71f0c61f802b37c 535 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 273 293 5.5E-32 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ATC04_05560 d3453efece1295fef71f0c61f802b37c 535 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 54 73 5.5E-32 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ATC04_05560 d3453efece1295fef71f0c61f802b37c 535 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 98 124 5.5E-32 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ATC04_05560 d3453efece1295fef71f0c61f802b37c 535 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 327 346 5.5E-32 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ATC04_05560 d3453efece1295fef71f0c61f802b37c 535 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 25 46 5.5E-32 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ATC04_05560 d3453efece1295fef71f0c61f802b37c 535 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 41 55 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ATC04_05560 d3453efece1295fef71f0c61f802b37c 535 Pfam PF00209 Sodium:neurotransmitter symporter family 142 500 7.1E-75 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ATC04_05560 d3453efece1295fef71f0c61f802b37c 535 Pfam PF00209 Sodium:neurotransmitter symporter family 17 134 4.0E-43 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ATC04_00525 457e240014f54fe9cbb5b62d7e746f7c 465 SMART SM00332 2 235 2.9E-20 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ATC04_00525 457e240014f54fe9cbb5b62d7e746f7c 465 SMART SM00331 11 237 8.8E-31 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ATC04_00525 457e240014f54fe9cbb5b62d7e746f7c 465 Gene3D G3DSA:3.60.40.10 1 240 1.2E-57 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ATC04_00525 457e240014f54fe9cbb5b62d7e746f7c 465 Pfam PF00481 Protein phosphatase 2C 35 229 1.4E-8 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ATC04_00525 457e240014f54fe9cbb5b62d7e746f7c 465 SUPERFAMILY SSF81606 4 234 1.83E-57 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ATC04_05530 fc1fb0e35f11bcd37f3052dc66872437 265 Gene3D G3DSA:3.40.190.10 132 227 3.7E-54 T 11-10-2018 ATC04_05530 fc1fb0e35f11bcd37f3052dc66872437 265 SMART SM00062 49 265 6.0E-55 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ATC04_05530 fc1fb0e35f11bcd37f3052dc66872437 265 Gene3D G3DSA:3.40.190.10 47 262 3.7E-54 T 11-10-2018 ATC04_05530 fc1fb0e35f11bcd37f3052dc66872437 265 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 71 84 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site ATC04_05530 fc1fb0e35f11bcd37f3052dc66872437 265 SUPERFAMILY SSF53850 10 264 3.04E-56 T 11-10-2018 ATC04_05530 fc1fb0e35f11bcd37f3052dc66872437 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 264 4.3E-51 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ATC04_02625 36cd7a0d38a67919603a09efde164d83 256 SUPERFAMILY SSF52402 1 250 8.37E-60 T 11-10-2018 ATC04_02625 36cd7a0d38a67919603a09efde164d83 256 SMART SM00893 22 212 3.2E-37 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_02625 36cd7a0d38a67919603a09efde164d83 256 Gene3D G3DSA:3.40.50.620 1 254 7.4E-69 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_02625 36cd7a0d38a67919603a09efde164d83 256 PIRSF PIRSF000090 1 256 2.9E-65 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 ATC04_02625 36cd7a0d38a67919603a09efde164d83 256 Pfam PF01012 Electron transfer flavoprotein domain 28 207 1.6E-38 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_13140 473c3c0a9987038039ff3c3ccd1c4008 393 SUPERFAMILY SSF55874 256 361 1.79E-8 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_13140 473c3c0a9987038039ff3c3ccd1c4008 393 Gene3D G3DSA:3.30.565.10 245 371 6.4E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_13140 473c3c0a9987038039ff3c3ccd1c4008 393 Pfam PF07730 Histidine kinase 171 238 8.8E-14 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ATC04_03910 e7166f24a92a703e1ff7d5257d97a628 261 Pfam PF01614 Bacterial transcriptional regulator 128 252 1.5E-21 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ATC04_03910 e7166f24a92a703e1ff7d5257d97a628 261 Pfam PF09339 IclR helix-turn-helix domain 11 58 8.6E-11 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_03910 e7166f24a92a703e1ff7d5257d97a628 261 SUPERFAMILY SSF55781 74 256 1.57E-38 T 11-10-2018 ATC04_03910 e7166f24a92a703e1ff7d5257d97a628 261 SMART SM00346 9 99 9.7E-11 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_03910 e7166f24a92a703e1ff7d5257d97a628 261 Gene3D G3DSA:3.30.450.40 86 261 1.1E-43 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_03910 e7166f24a92a703e1ff7d5257d97a628 261 Gene3D G3DSA:1.10.10.10 4 81 1.4E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03910 e7166f24a92a703e1ff7d5257d97a628 261 SUPERFAMILY SSF46785 9 82 2.83E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_16800 9a326fe7b113bd0051d846cfd0a55c58 252 Gene3D G3DSA:3.20.20.370 26 234 1.3E-68 T 11-10-2018 ATC04_16800 9a326fe7b113bd0051d846cfd0a55c58 252 Pfam PF01522 Polysaccharide deacetylase 50 154 7.7E-38 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ATC04_16800 9a326fe7b113bd0051d846cfd0a55c58 252 SUPERFAMILY SSF88713 46 230 1.07E-62 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ATC04_10030 05c81d52ae7eadea64a38e0e3bcc6bc6 439 Pfam PF09594 Glycosyltransferase family 87 117 323 4.9E-6 T 11-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 ATC04_10030 05c81d52ae7eadea64a38e0e3bcc6bc6 439 PIRSF PIRSF010361 8 431 3.9E-91 T 11-10-2018 IPR016570 Uncharacterised conserved protein UCP010361, membrane ATC04_07385 e105ac79334248bab10ff9230382adbd 196 TIGRFAM TIGR00077 lspA: signal peptidase II 25 161 2.0E-24 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ATC04_07385 e105ac79334248bab10ff9230382adbd 196 Pfam PF01252 Signal peptidase (SPase) II 27 165 1.9E-30 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ATC04_07385 e105ac79334248bab10ff9230382adbd 196 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 19 172 14.281 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ATC04_07385 e105ac79334248bab10ff9230382adbd 196 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 66 74 2.4E-10 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ATC04_07385 e105ac79334248bab10ff9230382adbd 196 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 109 124 2.4E-10 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ATC04_07385 e105ac79334248bab10ff9230382adbd 196 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 147 163 2.4E-10 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ATC04_05740 97284e130b8a88a3f07ed60b66fbd21a 165 Gene3D G3DSA:3.30.420.10 1 164 5.0E-55 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_05740 97284e130b8a88a3f07ed60b66fbd21a 165 Pfam PF16473 3' exoribonuclease, RNase T-like 2 154 4.5E-17 T 11-10-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain ATC04_05740 97284e130b8a88a3f07ed60b66fbd21a 165 SUPERFAMILY SSF53098 4 151 1.95E-6 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_02365 a6afe0499b61eb2f1cbc77bfca689c77 254 Gene3D G3DSA:3.90.550.10 2 222 2.5E-26 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_02365 a6afe0499b61eb2f1cbc77bfca689c77 254 SUPERFAMILY SSF53448 6 226 1.78E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_02365 a6afe0499b61eb2f1cbc77bfca689c77 254 Pfam PF00535 Glycosyl transferase family 2 10 146 1.8E-10 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATC04_10775 b7aeb62e1171598fcea517529de165a1 478 Pfam PF13701 Transposase DDE domain group 1 12 462 7.2E-60 T 11-10-2018 IPR025668 Transposase DDE domain ATC04_00670 c8abe0141298e95081f9847cfbb010f8 175 Pfam PF13083 KH domain 29 101 4.0E-8 T 11-10-2018 ATC04_00670 c8abe0141298e95081f9847cfbb010f8 175 Gene3D G3DSA:3.30.1370.50 110 175 2.1E-18 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 ATC04_00670 c8abe0141298e95081f9847cfbb010f8 175 SMART SM00393 95 173 2.8E-18 T 11-10-2018 IPR001374 R3H domain GO:0003676 ATC04_00670 c8abe0141298e95081f9847cfbb010f8 175 Pfam PF01424 R3H domain 114 171 3.5E-16 T 11-10-2018 IPR001374 R3H domain GO:0003676 ATC04_00670 c8abe0141298e95081f9847cfbb010f8 175 SUPERFAMILY SSF82708 127 171 1.96E-11 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 ATC04_00670 c8abe0141298e95081f9847cfbb010f8 175 Gene3D G3DSA:3.30.300.20 24 109 1.2E-16 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ATC04_13515 352fb6d113955a145492e46876fc5206 76 SUPERFAMILY SSF55174 6 72 1.57E-19 T 11-10-2018 ATC04_13515 352fb6d113955a145492e46876fc5206 76 Pfam PF13275 S4 domain 10 72 4.2E-27 T 11-10-2018 ATC04_13515 352fb6d113955a145492e46876fc5206 76 Gene3D G3DSA:3.10.290.10 1 73 8.7E-25 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ATC04_06550 cd625d872b479880a2f85af1bc1e3e2e 145 Gene3D G3DSA:3.90.190.10 19 144 1.9E-16 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like ATC04_06550 cd625d872b479880a2f85af1bc1e3e2e 145 Pfam PF00102 Protein-tyrosine phosphatase 51 111 2.8E-6 T 11-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 ATC04_06550 cd625d872b479880a2f85af1bc1e3e2e 145 SUPERFAMILY SSF52799 37 141 2.97E-17 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like ATC04_04035 7b9be0f7d1c6fd1e5e387758bf208b54 147 Pfam PF00582 Universal stress protein family 3 138 1.9E-17 T 11-10-2018 IPR006016 UspA ATC04_04035 7b9be0f7d1c6fd1e5e387758bf208b54 147 Gene3D G3DSA:3.40.50.620 1 137 1.9E-16 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_04035 7b9be0f7d1c6fd1e5e387758bf208b54 147 SUPERFAMILY SSF52402 2 140 2.01E-17 T 11-10-2018 ATC04_05520 d33f28b593a546b8c95a02cf6d9b4156 260 SUPERFAMILY SSF52540 15 248 2.96E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_05520 d33f28b593a546b8c95a02cf6d9b4156 260 SMART SM00382 39 226 1.8E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_05520 d33f28b593a546b8c95a02cf6d9b4156 260 Gene3D G3DSA:3.40.50.300 14 258 1.9E-78 T 11-10-2018 ATC04_05520 d33f28b593a546b8c95a02cf6d9b4156 260 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_05520 d33f28b593a546b8c95a02cf6d9b4156 260 PIRSF PIRSF039085 11 254 1.8E-111 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ATC04_05520 d33f28b593a546b8c95a02cf6d9b4156 260 Pfam PF00005 ABC transporter 30 178 3.7E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_03550 e8ecd1ba1b8ab6c616efb5b556339c48 328 Pfam PF00775 Dioxygenase 109 184 4.9E-9 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ATC04_03550 e8ecd1ba1b8ab6c616efb5b556339c48 328 SUPERFAMILY SSF49482 37 277 1.07E-40 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ATC04_03550 e8ecd1ba1b8ab6c616efb5b556339c48 328 Gene3D G3DSA:2.60.130.10 46 242 3.4E-33 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ATC04_10935 c0b78051d3dd690eb599fa737b80ffa2 368 Gene3D G3DSA:3.20.20.80 93 276 1.2E-9 T 11-10-2018 ATC04_16175 5b966431368b90c68a88dcaea7200f2f 337 Pfam PF00849 RNA pseudouridylate synthase 96 279 5.1E-22 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_16175 5b966431368b90c68a88dcaea7200f2f 337 Gene3D G3DSA:3.30.2350.10 81 329 2.7E-41 T 11-10-2018 ATC04_16175 5b966431368b90c68a88dcaea7200f2f 337 SUPERFAMILY SSF55120 82 327 4.96E-43 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATC04_02390 826e5c59af18914b9c12889cd90b5533 390 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 1.0E-13 T 11-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated ATC04_02390 826e5c59af18914b9c12889cd90b5533 390 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ATC04_02390 826e5c59af18914b9c12889cd90b5533 390 Pfam PF00107 Zinc-binding dehydrogenase 189 254 9.4E-9 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATC04_02390 826e5c59af18914b9c12889cd90b5533 390 SUPERFAMILY SSF50129 1 191 2.89E-58 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_02390 826e5c59af18914b9c12889cd90b5533 390 Gene3D G3DSA:3.40.50.720 169 348 7.0E-114 T 11-10-2018 ATC04_02390 826e5c59af18914b9c12889cd90b5533 390 SUPERFAMILY SSF51735 156 347 2.27E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_02390 826e5c59af18914b9c12889cd90b5533 390 Gene3D G3DSA:3.90.180.10 4 378 7.0E-114 T 11-10-2018 ATC04_02390 826e5c59af18914b9c12889cd90b5533 390 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 140 1.1E-27 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATC04_08085 71f426025ff3a5ef05adf3a8355191a4 250 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 246 2.9E-26 T 11-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase ATC04_03275 2de30a08d2e09322bccd8e8bc556c9b2 310 Pfam PF06089 L-asparaginase II 8 307 7.3E-102 T 11-10-2018 IPR010349 L-asparaginase II ATC04_01520 7c82194ee66e0f835c7520410394ae49 235 Pfam PF01292 Prokaryotic cytochrome b561 5 189 1.9E-12 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ATC04_01520 7c82194ee66e0f835c7520410394ae49 235 SUPERFAMILY SSF81342 3 198 4.94E-19 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ATC04_01520 7c82194ee66e0f835c7520410394ae49 235 Gene3D G3DSA:1.20.950.20 1 184 1.8E-10 T 11-10-2018 ATC04_14070 24ae4b4c238ce7347b94663ba44a3cca 329 Gene3D G3DSA:3.30.530.20 172 315 5.6E-15 T 11-10-2018 IPR023393 START-like domain superfamily ATC04_14070 24ae4b4c238ce7347b94663ba44a3cca 329 Gene3D G3DSA:1.10.1780.10 6 153 9.1E-19 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ATC04_14070 24ae4b4c238ce7347b94663ba44a3cca 329 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 120 153 0.0017 T 11-10-2018 IPR004176 Clp, N-terminal ATC04_14070 24ae4b4c238ce7347b94663ba44a3cca 329 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 20 66 1.8E-5 T 11-10-2018 IPR004176 Clp, N-terminal ATC04_14070 24ae4b4c238ce7347b94663ba44a3cca 329 SUPERFAMILY SSF55961 174 299 1.58E-12 T 11-10-2018 ATC04_14070 24ae4b4c238ce7347b94663ba44a3cca 329 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 180 289 6.5E-8 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like ATC04_14070 24ae4b4c238ce7347b94663ba44a3cca 329 SUPERFAMILY SSF81923 16 77 1.83E-5 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ATC04_11045 999f1e8aa7a545f0220588c3f5ab25c4 627 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 239 373 2.0E-44 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ATC04_11045 999f1e8aa7a545f0220588c3f5ab25c4 627 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 437 592 2.6E-52 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ATC04_11045 999f1e8aa7a545f0220588c3f5ab25c4 627 SUPERFAMILY SSF52467 232 404 5.18E-58 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ATC04_11045 999f1e8aa7a545f0220588c3f5ab25c4 627 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 48 613 1.2E-225 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ATC04_11045 999f1e8aa7a545f0220588c3f5ab25c4 627 SUPERFAMILY SSF52518 44 226 3.28E-61 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_11045 999f1e8aa7a545f0220588c3f5ab25c4 627 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 48 214 2.7E-56 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ATC04_11045 999f1e8aa7a545f0220588c3f5ab25c4 627 Gene3D G3DSA:3.40.50.1220 232 403 3.2E-57 T 11-10-2018 ATC04_11045 999f1e8aa7a545f0220588c3f5ab25c4 627 Gene3D G3DSA:3.40.50.970 42 222 3.6E-68 T 11-10-2018 ATC04_11045 999f1e8aa7a545f0220588c3f5ab25c4 627 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 474 493 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 ATC04_11045 999f1e8aa7a545f0220588c3f5ab25c4 627 Gene3D G3DSA:3.40.50.970 408 622 9.1E-70 T 11-10-2018 ATC04_11045 999f1e8aa7a545f0220588c3f5ab25c4 627 SUPERFAMILY SSF52518 417 625 4.29E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_03800 9927de392cfd12e96ea80355a57fe5ba 116 Gene3D G3DSA:2.60.120.10 15 115 3.3E-21 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_03800 9927de392cfd12e96ea80355a57fe5ba 116 SUPERFAMILY SSF51182 17 110 1.96E-15 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ATC04_07715 c6b43f31567aed0cdc15a6829d91c67d 192 Gene3D G3DSA:3.40.430.10 2 189 7.0E-36 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_07715 c6b43f31567aed0cdc15a6829d91c67d 192 SUPERFAMILY SSF53597 2 191 1.96E-26 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_07715 c6b43f31567aed0cdc15a6829d91c67d 192 Pfam PF01872 RibD C-terminal domain 2 185 8.9E-16 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ATC04_15115 4ebe2f91269253f7ea77b353dfa5b374 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 384 1.4E-28 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATC04_15115 4ebe2f91269253f7ea77b353dfa5b374 392 Gene3D G3DSA:1.20.140.10 240 392 1.5E-35 T 11-10-2018 ATC04_15115 4ebe2f91269253f7ea77b353dfa5b374 392 SUPERFAMILY SSF47203 242 390 5.48E-38 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ATC04_15115 4ebe2f91269253f7ea77b353dfa5b374 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 21 132 5.8E-29 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ATC04_15115 4ebe2f91269253f7ea77b353dfa5b374 392 SUPERFAMILY SSF56645 9 238 4.71E-72 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ATC04_15115 4ebe2f91269253f7ea77b353dfa5b374 392 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 138 150 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ATC04_15115 4ebe2f91269253f7ea77b353dfa5b374 392 Gene3D G3DSA:2.40.110.10 135 237 6.7E-33 T 11-10-2018 ATC04_15115 4ebe2f91269253f7ea77b353dfa5b374 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 226 9.1E-23 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ATC04_15115 4ebe2f91269253f7ea77b353dfa5b374 392 Gene3D G3DSA:1.10.540.10 2 133 4.5E-38 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ATC04_01195 1bd71be1f02b3ad0574b594226612b71 277 Gene3D G3DSA:2.60.120.10 45 170 8.3E-95 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_01195 1bd71be1f02b3ad0574b594226612b71 277 Pfam PF07883 Cupin domain 77 146 2.0E-10 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ATC04_01195 1bd71be1f02b3ad0574b594226612b71 277 Pfam PF07883 Cupin domain 200 257 1.7E-8 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ATC04_01195 1bd71be1f02b3ad0574b594226612b71 277 Gene3D G3DSA:2.60.120.10 32 273 8.3E-95 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ATC04_01195 1bd71be1f02b3ad0574b594226612b71 277 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 11 276 1.5E-108 T 11-10-2018 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 ATC04_01195 1bd71be1f02b3ad0574b594226612b71 277 SUPERFAMILY SSF51182 25 276 2.13E-74 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ATC04_10975 0f532f903c0ffec0fd9ddc2eb912a10b 384 Gene3D G3DSA:3.40.640.10 1 252 2.1E-89 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_10975 0f532f903c0ffec0fd9ddc2eb912a10b 384 Gene3D G3DSA:3.90.1150.10 254 378 3.7E-28 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_10975 0f532f903c0ffec0fd9ddc2eb912a10b 384 PIRSF PIRSF000390 1 380 2.3E-110 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ATC04_10975 0f532f903c0ffec0fd9ddc2eb912a10b 384 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 373 2.8E-111 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ATC04_10975 0f532f903c0ffec0fd9ddc2eb912a10b 384 SUPERFAMILY SSF53383 3 376 1.34E-105 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_18110 0cfbe9d6a56e2074c899a17702bdb6e5 400 SMART SM00974 285 379 4.9E-17 T 11-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding ATC04_18110 0cfbe9d6a56e2074c899a17702bdb6e5 400 Pfam PF10544 T5orf172 domain 270 379 7.2E-11 T 11-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding ATC04_18510 1b8df8dbdfaff4e565cd66b529915645 594 SUPERFAMILY SSF52540 136 554 2.44E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_18510 1b8df8dbdfaff4e565cd66b529915645 594 Gene3D G3DSA:3.40.50.300 340 555 4.0E-26 T 11-10-2018 ATC04_18510 1b8df8dbdfaff4e565cd66b529915645 594 Pfam PF12696 TraM recognition site of TraD and TraG 411 529 1.9E-27 T 11-10-2018 IPR032689 TraD/TraG, TraM recognition site ATC04_05985 f12032a0667744ec367c0278ff241758 80 Pfam PF04024 PspC domain 18 66 3.8E-15 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal ATC04_10580 35ed1ed8fd5a5908156ccb66584d7599 153 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 67 1.4E-20 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATC04_10580 35ed1ed8fd5a5908156ccb66584d7599 153 Pfam PF01467 Cytidylyltransferase-like 6 115 1.0E-21 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATC04_10580 35ed1ed8fd5a5908156ccb66584d7599 153 Gene3D G3DSA:3.40.50.620 3 127 5.1E-37 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_10580 35ed1ed8fd5a5908156ccb66584d7599 153 SUPERFAMILY SSF52374 3 126 3.94E-29 T 11-10-2018 ATC04_13925 82ae27ad5ed920aafd71437677d3bd15 171 Pfam PF11706 CGNR zinc finger 129 171 8.3E-14 T 11-10-2018 IPR021005 Zinc finger, CGNR ATC04_13925 82ae27ad5ed920aafd71437677d3bd15 171 Gene3D G3DSA:1.10.3300.10 2 171 2.7E-36 T 11-10-2018 IPR023286 ABATE domain superfamily ATC04_13925 82ae27ad5ed920aafd71437677d3bd15 171 SUPERFAMILY SSF160904 1 170 1.96E-34 T 11-10-2018 ATC04_16500 259b31d8be3f78cb3d27c12f04f54ddf 153 SUPERFAMILY SSF55399 46 144 1.44E-17 T 11-10-2018 IPR036819 Subtilisin inhibitor-like superfamily GO:0004867 ATC04_16500 259b31d8be3f78cb3d27c12f04f54ddf 153 Gene3D G3DSA:3.30.350.10 41 141 9.3E-11 T 11-10-2018 IPR036819 Subtilisin inhibitor-like superfamily GO:0004867 ATC04_02685 0147dd72ff45bd171ed228c3cbccb791 256 Pfam PF02517 CAAX protease self-immunity 147 239 1.8E-14 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 ATC04_15670 e355affa6ae89e8c006f64f462a67916 2163 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1944 2021 3.0E-9 T 11-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 ATC04_01890 8fc664f80216470cb07eefb2163d25c6 548 SUPERFAMILY SSF51445 15 485 2.09E-117 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ATC04_01890 8fc664f80216470cb07eefb2163d25c6 548 SMART SM00642 24 429 4.9E-109 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATC04_01890 8fc664f80216470cb07eefb2163d25c6 548 Gene3D G3DSA:3.20.20.80 16 483 7.7E-136 T 11-10-2018 ATC04_01890 8fc664f80216470cb07eefb2163d25c6 548 Gene3D G3DSA:3.90.400.10 116 188 7.7E-136 T 11-10-2018 ATC04_01890 8fc664f80216470cb07eefb2163d25c6 548 Pfam PF00128 Alpha amylase, catalytic domain 39 402 1.0E-70 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATC04_10835 363ccc0f5226274fc530b9cbff9451b9 434 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 228 390 4.3E-10 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ATC04_10835 363ccc0f5226274fc530b9cbff9451b9 434 SUPERFAMILY SSF52540 217 421 9.51E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10835 363ccc0f5226274fc530b9cbff9451b9 434 Gene3D G3DSA:3.40.50.300 146 404 3.4E-74 T 11-10-2018 ATC04_10835 363ccc0f5226274fc530b9cbff9451b9 434 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 198 395 5.3E-42 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 ATC04_15550 f13f86e4a3f10c55192230c4a97f0f74 74 Pfam PF12728 Helix-turn-helix domain 11 61 4.8E-10 T 11-10-2018 ATC04_15550 f13f86e4a3f10c55192230c4a97f0f74 74 SUPERFAMILY SSF46955 11 62 6.41E-9 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_12955 4a7cb4d7205adcf64cdfa0900192327f 335 Gene3D G3DSA:3.40.190.150 44 327 3.9E-65 T 11-10-2018 ATC04_12955 4a7cb4d7205adcf64cdfa0900192327f 335 PIRSF PIRSF017082 2 335 1.8E-93 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 ATC04_12955 4a7cb4d7205adcf64cdfa0900192327f 335 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 61 334 1.4E-26 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 ATC04_12955 4a7cb4d7205adcf64cdfa0900192327f 335 Gene3D G3DSA:3.40.190.10 137 262 3.9E-65 T 11-10-2018 ATC04_12955 4a7cb4d7205adcf64cdfa0900192327f 335 SUPERFAMILY SSF53850 43 298 4.4E-14 T 11-10-2018 ATC04_02545 69fdcd27fffb2bd7ca30f93cb4f463aa 144 SUPERFAMILY SSF49764 6 131 3.31E-24 T 11-10-2018 IPR008978 HSP20-like chaperone ATC04_02545 69fdcd27fffb2bd7ca30f93cb4f463aa 144 Gene3D G3DSA:2.60.40.790 1 132 1.1E-23 T 11-10-2018 IPR008978 HSP20-like chaperone ATC04_02545 69fdcd27fffb2bd7ca30f93cb4f463aa 144 Pfam PF00011 Hsp20/alpha crystallin family 34 131 5.8E-17 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain ATC04_17850 982559140b2ce77a4e3d6df913f3fbfb 98 SUPERFAMILY SSF52821 2 97 1.31E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_17850 982559140b2ce77a4e3d6df913f3fbfb 98 Gene3D G3DSA:3.40.250.10 3 98 1.3E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ATC04_17850 982559140b2ce77a4e3d6df913f3fbfb 98 Pfam PF00581 Rhodanese-like domain 11 92 3.1E-14 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_17850 982559140b2ce77a4e3d6df913f3fbfb 98 SMART SM00450 2 96 1.9E-17 T 11-10-2018 IPR001763 Rhodanese-like domain ATC04_06690 b0fc46daae0188618ef0ff3fa3fd333b 67 Gene3D G3DSA:2.30.30.30 14 67 1.7E-6 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 ATC04_06690 b0fc46daae0188618ef0ff3fa3fd333b 67 Pfam PF00467 KOW motif 16 37 5.7E-5 T 11-10-2018 IPR005824 KOW ATC04_14240 01cdd00d412fe3e6ac89ef7e4db17e84 226 Pfam PF14030 Protein of unknown function (DUF4245) 56 219 2.2E-31 T 11-10-2018 IPR025339 Protein of unknown function DUF4245 ATC04_06725 aa7be3a168bcb81303a0f901a6d43430 143 Pfam PF02566 OsmC-like protein 40 139 3.2E-13 T 11-10-2018 IPR003718 OsmC/Ohr family ATC04_06725 aa7be3a168bcb81303a0f901a6d43430 143 Gene3D G3DSA:3.30.300.20 6 142 6.4E-25 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ATC04_06725 aa7be3a168bcb81303a0f901a6d43430 143 SUPERFAMILY SSF82784 10 141 3.01E-19 T 11-10-2018 IPR036102 OsmC/Ohr superfamily ATC04_03975 b2b2f358a74b938cd7dbf3c3dd07e307 285 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 94 273 6.0E-9 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ATC04_03975 b2b2f358a74b938cd7dbf3c3dd07e307 285 Gene3D G3DSA:3.60.10.10 75 284 2.1E-24 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ATC04_03975 b2b2f358a74b938cd7dbf3c3dd07e307 285 SUPERFAMILY SSF56219 74 280 1.44E-21 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ATC04_11360 8c091fa777caa70b248e90f5df4f03ee 288 PRINTS PR00207 Flagellin signature 76 95 1.6E-23 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ATC04_11360 8c091fa777caa70b248e90f5df4f03ee 288 PRINTS PR00207 Flagellin signature 37 54 1.6E-23 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ATC04_11360 8c091fa777caa70b248e90f5df4f03ee 288 PRINTS PR00207 Flagellin signature 111 134 1.6E-23 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ATC04_11360 8c091fa777caa70b248e90f5df4f03ee 288 Gene3D G3DSA:1.10.8.410 239 287 1.2E-27 T 11-10-2018 ATC04_11360 8c091fa777caa70b248e90f5df4f03ee 288 Pfam PF00700 Bacterial flagellin C-terminal helical region 203 287 2.9E-29 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ATC04_11360 8c091fa777caa70b248e90f5df4f03ee 288 SUPERFAMILY SSF64518 1 287 2.22E-88 T 11-10-2018 ATC04_11360 8c091fa777caa70b248e90f5df4f03ee 288 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 9.3E-46 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ATC04_11360 8c091fa777caa70b248e90f5df4f03ee 288 Gene3D G3DSA:1.20.1330.10 51 238 2.4E-55 T 11-10-2018 ATC04_10535 a40622f513f2b31ee7ca9bb925a09b07 309 SUPERFAMILY SSF81624 2 129 2.22E-31 T 11-10-2018 IPR035937 MutM-like, N-terminal ATC04_10535 a40622f513f2b31ee7ca9bb925a09b07 309 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 158 243 5.0E-18 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ATC04_10535 a40622f513f2b31ee7ca9bb925a09b07 309 Gene3D G3DSA:3.20.190.10 2 136 1.2E-34 T 11-10-2018 IPR035937 MutM-like, N-terminal ATC04_10535 a40622f513f2b31ee7ca9bb925a09b07 309 SUPERFAMILY SSF57716 248 302 7.7E-12 T 11-10-2018 ATC04_10535 a40622f513f2b31ee7ca9bb925a09b07 309 SUPERFAMILY SSF46946 156 245 2.5E-20 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ATC04_10535 a40622f513f2b31ee7ca9bb925a09b07 309 SMART SM00898 2 127 9.6E-43 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ATC04_10535 a40622f513f2b31ee7ca9bb925a09b07 309 SMART SM01232 156 248 8.5E-29 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ATC04_10535 a40622f513f2b31ee7ca9bb925a09b07 309 Gene3D G3DSA:1.10.8.50 159 303 2.1E-34 T 11-10-2018 ATC04_10535 a40622f513f2b31ee7ca9bb925a09b07 309 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 301 1.4E-71 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 ATC04_10535 a40622f513f2b31ee7ca9bb925a09b07 309 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 126 2.0E-32 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ATC04_16335 ffc22db32933de51f20cd1480d6c4d30 454 Gene3D G3DSA:3.30.1360.110 276 392 3.1E-170 T 11-10-2018 IPR023116 Phosphonoacetate hydrolase, insert domain superfamily KEGG: 00440+3.11.1.2 ATC04_16335 ffc22db32933de51f20cd1480d6c4d30 454 TIGRFAM TIGR02335 hydr_PhnA: phosphonoacetate hydrolase 9 441 1.0E-136 T 11-10-2018 IPR012710 Phosphonoacetate hydrolase GO:0047400 KEGG: 00440+3.11.1.2 ATC04_16335 ffc22db32933de51f20cd1480d6c4d30 454 Gene3D G3DSA:3.40.720.10 9 437 3.1E-170 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ATC04_16335 ffc22db32933de51f20cd1480d6c4d30 454 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 22 390 5.2E-28 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 ATC04_16335 ffc22db32933de51f20cd1480d6c4d30 454 SUPERFAMILY SSF53649 18 415 9.16E-83 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ATC04_17390 cbe1f75f46bd86ce46856d99dea5f7c8 307 PRINTS PR00412 Epoxide hydrolase signature 275 297 3.5E-21 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_17390 cbe1f75f46bd86ce46856d99dea5f7c8 307 PRINTS PR00412 Epoxide hydrolase signature 238 254 3.5E-21 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_17390 cbe1f75f46bd86ce46856d99dea5f7c8 307 PRINTS PR00412 Epoxide hydrolase signature 108 121 3.5E-21 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_17390 cbe1f75f46bd86ce46856d99dea5f7c8 307 PRINTS PR00412 Epoxide hydrolase signature 64 79 3.5E-21 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_17390 cbe1f75f46bd86ce46856d99dea5f7c8 307 PRINTS PR00412 Epoxide hydrolase signature 44 62 3.5E-21 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_17390 cbe1f75f46bd86ce46856d99dea5f7c8 307 PRINTS PR00412 Epoxide hydrolase signature 122 135 3.5E-21 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_17390 cbe1f75f46bd86ce46856d99dea5f7c8 307 Pfam PF12697 Alpha/beta hydrolase family 40 290 2.4E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_17390 cbe1f75f46bd86ce46856d99dea5f7c8 307 SUPERFAMILY SSF53474 16 301 2.17E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_17390 cbe1f75f46bd86ce46856d99dea5f7c8 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 2.2E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_17390 cbe1f75f46bd86ce46856d99dea5f7c8 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 64 79 2.2E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_17390 cbe1f75f46bd86ce46856d99dea5f7c8 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 2.2E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_17390 cbe1f75f46bd86ce46856d99dea5f7c8 307 Gene3D G3DSA:3.40.50.1820 16 299 1.6E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_03940 e3b9ebe156cd405077d209db87a49196 286 Pfam PF04909 Amidohydrolase 4 277 2.7E-28 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ATC04_03940 e3b9ebe156cd405077d209db87a49196 286 Gene3D G3DSA:3.20.20.140 1 285 1.0E-68 T 11-10-2018 ATC04_03940 e3b9ebe156cd405077d209db87a49196 286 SUPERFAMILY SSF51556 4 277 9.07E-50 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_17450 38fa78a12545a7887bdc45062bcda012 372 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 50 368 1.6E-63 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 ATC04_17450 38fa78a12545a7887bdc45062bcda012 372 Gene3D G3DSA:3.40.190.10 54 354 5.9E-92 T 11-10-2018 ATC04_17450 38fa78a12545a7887bdc45062bcda012 372 Pfam PF12849 PBP superfamily domain 41 338 3.2E-57 T 11-10-2018 IPR024370 PBP domain ATC04_17450 38fa78a12545a7887bdc45062bcda012 372 Gene3D G3DSA:3.40.190.10 132 308 5.9E-92 T 11-10-2018 ATC04_17450 38fa78a12545a7887bdc45062bcda012 372 SUPERFAMILY SSF53850 49 369 2.65E-78 T 11-10-2018 ATC04_17450 38fa78a12545a7887bdc45062bcda012 372 PIRSF PIRSF002756 6 371 3.1E-108 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 ATC04_14965 f0232b3eda494906145ca8c758c61fa6 188 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 188 28.36 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 ATC04_14965 f0232b3eda494906145ca8c758c61fa6 188 Gene3D G3DSA:3.40.50.170 1 188 9.5E-70 T 11-10-2018 ATC04_14965 f0232b3eda494906145ca8c758c61fa6 188 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 1 186 2.5E-64 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 ATC04_14965 f0232b3eda494906145ca8c758c61fa6 188 Pfam PF00551 Formyl transferase 1 181 1.1E-51 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATC04_14965 f0232b3eda494906145ca8c758c61fa6 188 SUPERFAMILY SSF53328 1 186 6.02E-56 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATC04_15815 f2b09c08986bc88da9ecd996e3bc392e 323 Gene3D G3DSA:3.40.50.300 4 183 3.9E-6 T 11-10-2018 ATC04_15815 f2b09c08986bc88da9ecd996e3bc392e 323 SUPERFAMILY SSF52540 21 167 1.87E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_14930 637600918d6af060fcd0c78544ffc001 628 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 76 524 1.3E-125 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ATC04_14930 637600918d6af060fcd0c78544ffc001 628 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 38 524 3.6E-151 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ATC04_15255 19f63ae1c19ccca1b6035ff3471a47eb 164 SMART SM00507 70 119 2.5E-14 T 11-10-2018 IPR003615 HNH nuclease ATC04_15255 19f63ae1c19ccca1b6035ff3471a47eb 164 Gene3D G3DSA:3.30.40.60 52 147 1.0E-21 T 11-10-2018 ATC04_15255 19f63ae1c19ccca1b6035ff3471a47eb 164 Pfam PF14279 HNH endonuclease 83 131 1.3E-15 T 11-10-2018 IPR029471 HNH endonuclease 5 ATC04_06555 e6abe9013acf038c2dc188f921481d5c 177 SUPERFAMILY SSF55144 9 143 8.63E-22 T 11-10-2018 IPR009097 Cyclic phosphodiesterase ATC04_06555 e6abe9013acf038c2dc188f921481d5c 177 Gene3D G3DSA:3.90.1140.10 8 167 2.2E-8 T 11-10-2018 ATC04_06555 e6abe9013acf038c2dc188f921481d5c 177 Pfam PF02834 LigT like Phosphoesterase 13 87 7.8E-6 T 11-10-2018 IPR014051 Phosphoesterase, HXTX ATC04_14850 37229556926ab312e838c1c4f9d58449 510 Pfam PF01966 HD domain 63 156 1.6E-9 T 11-10-2018 IPR006674 HD domain ATC04_14850 37229556926ab312e838c1c4f9d58449 510 SMART SM00471 59 258 1.3E-8 T 11-10-2018 IPR003607 HD/PDEase domain ATC04_14850 37229556926ab312e838c1c4f9d58449 510 Gene3D G3DSA:1.10.3210.10 2 325 1.5E-65 T 11-10-2018 ATC04_14850 37229556926ab312e838c1c4f9d58449 510 SUPERFAMILY SSF109604 15 277 1.03E-45 T 11-10-2018 ATC04_14850 37229556926ab312e838c1c4f9d58449 510 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 26 493 1.1E-59 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 ATC04_14850 37229556926ab312e838c1c4f9d58449 510 Pfam PF13286 Phosphohydrolase-associated domain 384 492 9.6E-5 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain ATC04_17090 b6690ef74a529d2cd8217169d0eb1418 266 SUPERFAMILY SSF56219 2 264 1.57E-65 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ATC04_17090 b6690ef74a529d2cd8217169d0eb1418 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 264 4.0E-73 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 ATC04_17090 b6690ef74a529d2cd8217169d0eb1418 266 Gene3D G3DSA:3.60.10.10 1 265 5.3E-62 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ATC04_17090 b6690ef74a529d2cd8217169d0eb1418 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 264 7.9E-56 T 11-10-2018 ATC04_17090 b6690ef74a529d2cd8217169d0eb1418 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 257 1.5E-17 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ATC04_14570 5b09e8b989353315737cb789a5df47f0 306 Gene3D G3DSA:3.40.190.10 95 289 9.6E-54 T 11-10-2018 ATC04_14570 5b09e8b989353315737cb789a5df47f0 306 Gene3D G3DSA:1.10.10.10 2 86 8.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_14570 5b09e8b989353315737cb789a5df47f0 306 Gene3D G3DSA:3.40.190.10 165 270 9.6E-54 T 11-10-2018 ATC04_14570 5b09e8b989353315737cb789a5df47f0 306 SUPERFAMILY SSF46785 3 115 7.96E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_14570 5b09e8b989353315737cb789a5df47f0 306 Pfam PF03466 LysR substrate binding domain 93 294 2.9E-35 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_14570 5b09e8b989353315737cb789a5df47f0 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.2E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_14570 5b09e8b989353315737cb789a5df47f0 306 SUPERFAMILY SSF53850 93 299 4.22E-34 T 11-10-2018 ATC04_02440 a420af49eae7eee0a8b5b25176981f60 151 Gene3D G3DSA:3.30.240.20 76 151 4.2E-17 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily ATC04_02440 a420af49eae7eee0a8b5b25176981f60 151 Pfam PF04239 Protein of unknown function (DUF421) 87 148 2.3E-13 T 11-10-2018 IPR007353 Protein of unknown function DUF421 ATC04_00450 847f1a9b2ede5292b8777cb81698116a 241 SUPERFAMILY SSF51695 4 237 3.14E-48 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ATC04_00450 847f1a9b2ede5292b8777cb81698116a 241 Gene3D G3DSA:3.20.20.190 1 240 1.6E-52 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ATC04_00450 847f1a9b2ede5292b8777cb81698116a 241 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 185 230 2.2E-7 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ATC04_00450 847f1a9b2ede5292b8777cb81698116a 241 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 129 1.7E-17 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ATC04_07525 1d40931f63ab45eab06038a94075e910 321 Gene3D G3DSA:3.30.2010.10 114 199 8.4E-8 T 11-10-2018 ATC04_07525 1d40931f63ab45eab06038a94075e910 321 Pfam PF01435 Peptidase family M48 134 198 5.4E-10 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ATC04_08200 7f9bf2e2bdcb37a11154a5c62ff148c3 209 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 91 193 4.9E-34 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ATC04_08200 7f9bf2e2bdcb37a11154a5c62ff148c3 209 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 160 167 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ATC04_08200 7f9bf2e2bdcb37a11154a5c62ff148c3 209 PIRSF PIRSF000349 1 202 1.1E-75 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ATC04_08200 7f9bf2e2bdcb37a11154a5c62ff148c3 209 SUPERFAMILY SSF46609 3 88 2.88E-31 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ATC04_08200 7f9bf2e2bdcb37a11154a5c62ff148c3 209 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 4 84 3.6E-31 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ATC04_08200 7f9bf2e2bdcb37a11154a5c62ff148c3 209 SUPERFAMILY SSF54719 84 198 2.23E-42 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ATC04_08200 7f9bf2e2bdcb37a11154a5c62ff148c3 209 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 5.0E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ATC04_08200 7f9bf2e2bdcb37a11154a5c62ff148c3 209 PRINTS PR01703 Manganese superoxide dismutase signature 158 170 5.0E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ATC04_08200 7f9bf2e2bdcb37a11154a5c62ff148c3 209 PRINTS PR01703 Manganese superoxide dismutase signature 67 80 5.0E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ATC04_08200 7f9bf2e2bdcb37a11154a5c62ff148c3 209 PRINTS PR01703 Manganese superoxide dismutase signature 120 128 5.0E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ATC04_08200 7f9bf2e2bdcb37a11154a5c62ff148c3 209 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 5.0E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ATC04_08200 7f9bf2e2bdcb37a11154a5c62ff148c3 209 Gene3D G3DSA:1.10.287.990 21 84 1.0E-27 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ATC04_08200 7f9bf2e2bdcb37a11154a5c62ff148c3 209 Gene3D G3DSA:2.40.500.20 85 207 4.6E-44 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ATC04_01515 ed18f0d3c62aed80c9c82e597de976e1 329 Gene3D G3DSA:3.40.50.1220 197 329 8.3E-57 T 11-10-2018 ATC04_01515 ed18f0d3c62aed80c9c82e597de976e1 329 SUPERFAMILY SSF52402 9 181 1.88E-24 T 11-10-2018 ATC04_01515 ed18f0d3c62aed80c9c82e597de976e1 329 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 204 286 3.4E-35 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 ATC04_01515 ed18f0d3c62aed80c9c82e597de976e1 329 Pfam PF01012 Electron transfer flavoprotein domain 10 174 1.1E-20 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_01515 ed18f0d3c62aed80c9c82e597de976e1 329 Gene3D G3DSA:3.40.50.620 7 187 2.0E-24 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_01515 ed18f0d3c62aed80c9c82e597de976e1 329 SMART SM00893 9 200 5.6E-8 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATC04_01515 ed18f0d3c62aed80c9c82e597de976e1 329 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 267 293 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 ATC04_01515 ed18f0d3c62aed80c9c82e597de976e1 329 PIRSF PIRSF000089 7 328 1.5E-91 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 ATC04_01515 ed18f0d3c62aed80c9c82e597de976e1 329 SUPERFAMILY SSF52467 203 323 1.82E-47 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ATC04_15160 cf51b2998a65ca68a5bbaacbf6a4da9d 329 PIRSF PIRSF036979 26 321 2.6E-110 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ATC04_15160 cf51b2998a65ca68a5bbaacbf6a4da9d 329 Pfam PF00491 Arginase family 41 313 5.3E-89 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ATC04_15160 cf51b2998a65ca68a5bbaacbf6a4da9d 329 ProSitePatterns PS01053 Arginase family signature. 245 266 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 ATC04_15160 cf51b2998a65ca68a5bbaacbf6a4da9d 329 TIGRFAM TIGR01230 agmatinase: agmatinase 38 314 1.5E-63 T 11-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 ATC04_15160 cf51b2998a65ca68a5bbaacbf6a4da9d 329 SUPERFAMILY SSF52768 21 316 1.6E-94 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily ATC04_15160 cf51b2998a65ca68a5bbaacbf6a4da9d 329 Gene3D G3DSA:3.40.800.10 10 323 1.9E-109 T 11-10-2018 ATC04_15160 cf51b2998a65ca68a5bbaacbf6a4da9d 329 PRINTS PR00116 Arginase signature 242 271 3.0E-14 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ATC04_15160 cf51b2998a65ca68a5bbaacbf6a4da9d 329 PRINTS PR00116 Arginase signature 128 143 3.0E-14 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ATC04_08880 bd76107eb39ad95ebcc886884766fdc7 423 Gene3D G3DSA:1.20.1250.20 16 411 6.8E-40 T 11-10-2018 ATC04_08880 bd76107eb39ad95ebcc886884766fdc7 423 Pfam PF07690 Major Facilitator Superfamily 248 409 4.5E-14 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_08880 bd76107eb39ad95ebcc886884766fdc7 423 SUPERFAMILY SSF103473 21 409 6.41E-44 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_08880 bd76107eb39ad95ebcc886884766fdc7 423 Pfam PF00083 Sugar (and other) transporter 58 165 3.6E-5 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_14035 6709ce7f1d85bbb714b32cec611a10a2 143 Pfam PF08818 Domain of unknown function (DU1801) 26 131 1.5E-7 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 ATC04_01285 f668ddd57a0e80e4ed4f034f3e711e76 142 SUPERFAMILY SSF55729 7 102 5.61E-9 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_01285 f668ddd57a0e80e4ed4f034f3e711e76 142 Gene3D G3DSA:3.40.630.30 6 103 3.0E-16 T 11-10-2018 ATC04_00565 d5e712f521734639aa1465d2aeb6d582 105 SUPERFAMILY SSF103481 5 100 8.11E-12 T 11-10-2018 ATC04_00565 d5e712f521734639aa1465d2aeb6d582 105 Gene3D G3DSA:1.10.3730.20 1 105 1.1E-23 T 11-10-2018 ATC04_00565 d5e712f521734639aa1465d2aeb6d582 105 Pfam PF00893 Small Multidrug Resistance protein 1 90 1.3E-19 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 ATC04_09930 14d70b0131f28f2886c0dac3922b2004 295 Pfam PF00588 SpoU rRNA Methylase family 150 292 2.9E-35 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ATC04_09930 14d70b0131f28f2886c0dac3922b2004 295 Gene3D G3DSA:3.40.1280.10 138 295 1.3E-48 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATC04_09930 14d70b0131f28f2886c0dac3922b2004 295 SUPERFAMILY SSF55315 2 103 6.36E-11 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ATC04_09930 14d70b0131f28f2886c0dac3922b2004 295 SUPERFAMILY SSF75217 142 294 5.3E-41 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ATC04_03435 e1824437bef8e9bd19641a33860be134 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 305 3.6E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_03435 e1824437bef8e9bd19641a33860be134 310 SUPERFAMILY SSF161098 97 291 5.89E-14 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_03435 e1824437bef8e9bd19641a33860be134 310 Gene3D G3DSA:1.10.3720.10 90 304 7.9E-16 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_06215 b67cde2aea07ec27a6ae940eaa1f372e 151 SUPERFAMILY SSF52080 11 149 9.03E-40 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily ATC04_06215 b67cde2aea07ec27a6ae940eaa1f372e 151 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 33 149 7.8E-32 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P ATC04_06215 b67cde2aea07ec27a6ae940eaa1f372e 151 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 10 151 18.568 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 ATC04_06215 b67cde2aea07ec27a6ae940eaa1f372e 151 Gene3D G3DSA:3.100.10.10 72 151 6.2E-24 T 11-10-2018 ATC04_06215 b67cde2aea07ec27a6ae940eaa1f372e 151 ProSitePatterns PS00475 Ribosomal protein L15 signature. 115 145 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_06215 b67cde2aea07ec27a6ae940eaa1f372e 151 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 10 148 9.2E-45 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_05475 17aa5299d18ee25bd9f70989cc93f167 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 3.7E-9 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_05475 17aa5299d18ee25bd9f70989cc93f167 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 3.7E-9 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_05475 17aa5299d18ee25bd9f70989cc93f167 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 3.7E-9 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_05475 17aa5299d18ee25bd9f70989cc93f167 150 Pfam PF13404 AsnC-type helix-turn-helix domain 9 50 8.2E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ATC04_05475 17aa5299d18ee25bd9f70989cc93f167 150 Gene3D G3DSA:3.30.70.920 62 149 7.7E-19 T 11-10-2018 ATC04_05475 17aa5299d18ee25bd9f70989cc93f167 150 SUPERFAMILY SSF46785 8 68 2.51E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_05475 17aa5299d18ee25bd9f70989cc93f167 150 Gene3D G3DSA:1.10.10.10 1 61 4.0E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_05475 17aa5299d18ee25bd9f70989cc93f167 150 SMART SM00344 9 115 4.9E-25 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATC04_05475 17aa5299d18ee25bd9f70989cc93f167 150 SUPERFAMILY SSF54909 72 145 1.29E-14 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_05475 17aa5299d18ee25bd9f70989cc93f167 150 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 2.3E-12 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATC04_10570 e713702f5aaf366d159c24f4d470a7a5 275 SUPERFAMILY SSF53098 93 260 4.17E-10 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_10570 e713702f5aaf366d159c24f4d470a7a5 275 Pfam PF00665 Integrase core domain 96 228 5.6E-17 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_00520 36077633f0031d93d34c37eb34c97987 159 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 70 158 8.5E-19 T 11-10-2018 IPR032030 YscD, cytoplasmic domain ATC04_00520 36077633f0031d93d34c37eb34c97987 159 SMART SM00240 86 136 1.6E-10 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ATC04_00520 36077633f0031d93d34c37eb34c97987 159 Gene3D G3DSA:2.60.200.20 40 159 1.4E-28 T 11-10-2018 ATC04_00520 36077633f0031d93d34c37eb34c97987 159 SUPERFAMILY SSF49879 55 157 4.02E-26 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ATC04_16255 116f965ae84dc3dfe07364288d8d8b50 417 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 84 410 1.3E-38 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATC04_16255 116f965ae84dc3dfe07364288d8d8b50 417 SUPERFAMILY SSF51445 73 413 2.21E-48 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ATC04_16255 116f965ae84dc3dfe07364288d8d8b50 417 Gene3D G3DSA:3.20.20.300 80 414 7.8E-81 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 ATC04_07205 807ef09385a2d42ef47162137d5c5fc1 226 Pfam PF00072 Response regulator receiver domain 5 114 2.0E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_07205 807ef09385a2d42ef47162137d5c5fc1 226 SMART SM00448 3 113 2.1E-47 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_07205 807ef09385a2d42ef47162137d5c5fc1 226 SUPERFAMILY SSF46894 122 221 1.98E-30 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_07205 807ef09385a2d42ef47162137d5c5fc1 226 SMART SM00862 146 222 6.2E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_07205 807ef09385a2d42ef47162137d5c5fc1 226 Gene3D G3DSA:3.40.50.2300 1 126 3.3E-40 T 11-10-2018 ATC04_07205 807ef09385a2d42ef47162137d5c5fc1 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 1.3E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_07205 807ef09385a2d42ef47162137d5c5fc1 226 Gene3D G3DSA:1.10.10.10 127 226 6.7E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_07205 807ef09385a2d42ef47162137d5c5fc1 226 SUPERFAMILY SSF52172 2 130 3.56E-43 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_02575 d81153da896d22f77f1b9affe084619f 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.7E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_02575 d81153da896d22f77f1b9affe084619f 194 SUPERFAMILY SSF46689 6 84 3.54E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_02575 d81153da896d22f77f1b9affe084619f 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_02575 d81153da896d22f77f1b9affe084619f 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_02575 d81153da896d22f77f1b9affe084619f 194 Gene3D G3DSA:1.10.357.10 4 190 9.3E-26 T 11-10-2018 ATC04_03790 d9ed4667ce54aaf293ed19976e7d6389 262 SUPERFAMILY SSF46955 14 122 9.52E-28 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_03790 d9ed4667ce54aaf293ed19976e7d6389 262 ProSitePatterns PS00552 MerR-type HTH domain signature. 17 39 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_03790 d9ed4667ce54aaf293ed19976e7d6389 262 Gene3D G3DSA:1.10.490.50 166 260 1.7E-8 T 11-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain ATC04_03790 d9ed4667ce54aaf293ed19976e7d6389 262 Gene3D G3DSA:1.10.1660.10 12 146 1.3E-36 T 11-10-2018 ATC04_03790 d9ed4667ce54aaf293ed19976e7d6389 262 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 50 70 4.2E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_03790 d9ed4667ce54aaf293ed19976e7d6389 262 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 26 4.2E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_03790 d9ed4667ce54aaf293ed19976e7d6389 262 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 26 39 4.2E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_03790 d9ed4667ce54aaf293ed19976e7d6389 262 SUPERFAMILY SSF89082 167 258 4.84E-14 T 11-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain ATC04_03790 d9ed4667ce54aaf293ed19976e7d6389 262 Pfam PF13411 MerR HTH family regulatory protein 14 82 6.1E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_03790 d9ed4667ce54aaf293ed19976e7d6389 262 Pfam PF07739 TipAS antibiotic-recognition domain 137 255 6.8E-24 T 11-10-2018 IPR012925 TipAS antibiotic-recognition domain ATC04_03790 d9ed4667ce54aaf293ed19976e7d6389 262 SMART SM00422 14 83 2.8E-22 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_18100 4027c28885915e77bdf4b368072c2d00 561 Gene3D G3DSA:2.60.40.10 36 204 3.5E-31 T 11-10-2018 IPR013783 Immunoglobulin-like fold ATC04_18100 4027c28885915e77bdf4b368072c2d00 561 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 524 556 0.0023 T 11-10-2018 ATC04_18100 4027c28885915e77bdf4b368072c2d00 561 Gene3D G3DSA:2.60.40.10 396 519 1.2E-34 T 11-10-2018 IPR013783 Immunoglobulin-like fold ATC04_18100 4027c28885915e77bdf4b368072c2d00 561 Gene3D G3DSA:2.60.40.740 205 365 8.1E-27 T 11-10-2018 ATC04_18100 4027c28885915e77bdf4b368072c2d00 561 Pfam PF00746 LPXTG cell wall anchor motif 517 556 4.4E-4 T 11-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor ATC04_18100 4027c28885915e77bdf4b368072c2d00 561 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 207 334 4.8E-11 T 11-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain ATC04_00415 689e1f8e2a5ba3bf2a9a6d62101f9720 454 Pfam PF00083 Sugar (and other) transporter 29 228 1.4E-21 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATC04_00415 689e1f8e2a5ba3bf2a9a6d62101f9720 454 Pfam PF07690 Major Facilitator Superfamily 261 441 1.5E-12 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_00415 689e1f8e2a5ba3bf2a9a6d62101f9720 454 SUPERFAMILY SSF103473 13 436 5.23E-66 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_00415 689e1f8e2a5ba3bf2a9a6d62101f9720 454 Gene3D G3DSA:1.20.1250.20 24 445 6.7E-70 T 11-10-2018 ATC04_02135 3c8133ecdf831d0aeda3e96075b1b2f4 621 Pfam PF00391 PEP-utilising enzyme, mobile domain 528 599 9.5E-22 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ATC04_02135 3c8133ecdf831d0aeda3e96075b1b2f4 621 Gene3D G3DSA:3.50.30.10 500 605 4.7E-31 T 11-10-2018 ATC04_02135 3c8133ecdf831d0aeda3e96075b1b2f4 621 SUPERFAMILY SSF52009 496 602 7.59E-29 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 ATC04_11470 cf3521ee6897958e5483570d6cfe4f3f 527 SMART SM00507 399 451 3.1E-6 T 11-10-2018 IPR003615 HNH nuclease ATC04_11470 cf3521ee6897958e5483570d6cfe4f3f 527 Pfam PF02720 Domain of unknown function (DUF222) 165 408 4.3E-19 T 11-10-2018 IPR003870 Domain of unknown function DUF222 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 SUPERFAMILY SSF52343 104 237 9.3E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 Pfam PF00970 Oxidoreductase FAD-binding domain 16 113 7.7E-11 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 PRINTS PR00409 Phthalate dioxygenase reductase family signature 64 78 1.9E-9 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 PRINTS PR00409 Phthalate dioxygenase reductase family signature 101 115 1.9E-9 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 PRINTS PR00409 Phthalate dioxygenase reductase family signature 207 215 1.9E-9 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 PRINTS PR00409 Phthalate dioxygenase reductase family signature 123 142 1.9E-9 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 298 306 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 159 170 7.9E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 123 142 7.9E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 147 156 7.9E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 64 71 7.9E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 Gene3D G3DSA:2.40.30.10 11 114 1.0E-25 T 11-10-2018 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 Pfam PF00175 Oxidoreductase NAD-binding domain 125 220 8.1E-12 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 267 340 6.3E-16 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 SUPERFAMILY SSF54292 231 348 8.0E-27 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 Gene3D G3DSA:3.40.50.80 116 244 1.4E-27 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 Gene3D G3DSA:3.10.20.30 250 350 1.1E-28 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ATC04_01230 c293d7f2498ca0dc73f8cb46ae374e16 351 SUPERFAMILY SSF63380 12 113 2.07E-23 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ATC04_18360 05ffd4c195aff415ecd69063807dd678 304 SUPERFAMILY SSF49482 16 299 2.62E-87 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ATC04_18360 05ffd4c195aff415ecd69063807dd678 304 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 141 169 - T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ATC04_18360 05ffd4c195aff415ecd69063807dd678 304 Pfam PF04444 Catechol dioxygenase N terminus 34 108 2.6E-31 T 11-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 ATC04_18360 05ffd4c195aff415ecd69063807dd678 304 Pfam PF00775 Dioxygenase 112 298 1.3E-45 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ATC04_18360 05ffd4c195aff415ecd69063807dd678 304 Gene3D G3DSA:2.60.130.10 7 300 4.7E-121 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ATC04_01790 360dacaaca2c97bddd7db4f4c516c280 231 SMART SM00052 1 212 2.3E-11 T 11-10-2018 IPR001633 EAL domain ATC04_01790 360dacaaca2c97bddd7db4f4c516c280 231 Pfam PF00563 EAL domain 2 206 3.2E-32 T 11-10-2018 IPR001633 EAL domain ATC04_01790 360dacaaca2c97bddd7db4f4c516c280 231 SUPERFAMILY SSF141868 3 219 5.1E-38 T 11-10-2018 IPR035919 EAL domain superfamily ATC04_01790 360dacaaca2c97bddd7db4f4c516c280 231 Gene3D G3DSA:3.20.20.450 1 217 1.8E-37 T 11-10-2018 IPR035919 EAL domain superfamily ATC04_00705 f5f1cb4ae75bac041942d8a98f972fae 542 Pfam PF03023 MviN-like protein 26 492 3.5E-62 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ATC04_00705 f5f1cb4ae75bac041942d8a98f972fae 542 PRINTS PR01806 Virulence factor MviN signature 44 60 1.0E-6 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ATC04_00705 f5f1cb4ae75bac041942d8a98f972fae 542 PRINTS PR01806 Virulence factor MviN signature 145 166 1.0E-6 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ATC04_00705 f5f1cb4ae75bac041942d8a98f972fae 542 PRINTS PR01806 Virulence factor MviN signature 408 425 1.0E-6 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ATC04_00705 f5f1cb4ae75bac041942d8a98f972fae 542 PRINTS PR01806 Virulence factor MviN signature 121 145 1.0E-6 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ATC04_00705 f5f1cb4ae75bac041942d8a98f972fae 542 PRINTS PR01806 Virulence factor MviN signature 25 44 1.0E-6 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ATC04_05870 cf8bbfe3c2d29ea71df60763593a45c1 401 Gene3D G3DSA:1.10.443.10 194 392 1.6E-31 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ATC04_05870 cf8bbfe3c2d29ea71df60763593a45c1 401 Pfam PF00589 Phage integrase family 194 375 7.0E-15 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATC04_05870 cf8bbfe3c2d29ea71df60763593a45c1 401 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 71 122 1.7E-11 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ATC04_05870 cf8bbfe3c2d29ea71df60763593a45c1 401 Gene3D G3DSA:1.10.150.130 66 193 4.5E-26 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal ATC04_05870 cf8bbfe3c2d29ea71df60763593a45c1 401 SUPERFAMILY SSF56349 70 377 1.8E-53 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATC04_16430 642d114b9e263b618be5ee5950dac9fd 479 SMART SM00507 353 405 9.2E-8 T 11-10-2018 IPR003615 HNH nuclease ATC04_16430 642d114b9e263b618be5ee5950dac9fd 479 Pfam PF01844 HNH endonuclease 369 401 1.1E-4 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 ATC04_16430 642d114b9e263b618be5ee5950dac9fd 479 Pfam PF02720 Domain of unknown function (DUF222) 110 362 2.3E-24 T 11-10-2018 IPR003870 Domain of unknown function DUF222 ATC04_10420 f6a24933f5e5e2fec0f817a0f061ccac 383 Pfam PF13473 Cupredoxin-like domain 11 111 4.8E-8 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain ATC04_10420 f6a24933f5e5e2fec0f817a0f061ccac 383 Pfam PF09375 Imelysin 143 376 5.0E-40 T 11-10-2018 IPR018976 Imelysin-like domain ATC04_10420 f6a24933f5e5e2fec0f817a0f061ccac 383 Gene3D G3DSA:1.20.1420.20 136 383 1.6E-86 T 11-10-2018 IPR038352 Imelysin-like domain superfamily ATC04_07110 db6b4c18215e95c4312c0b2f5ed93246 245 Pfam PF01872 RibD C-terminal domain 27 227 4.4E-24 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ATC04_07110 db6b4c18215e95c4312c0b2f5ed93246 245 SUPERFAMILY SSF53597 25 217 1.96E-28 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_07110 db6b4c18215e95c4312c0b2f5ed93246 245 Gene3D G3DSA:3.40.430.10 7 243 6.3E-51 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_16850 be23a3d6230fb786182c1a7fe232a3d6 298 Pfam PF00892 EamA-like transporter family 148 279 2.6E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ATC04_16850 be23a3d6230fb786182c1a7fe232a3d6 298 Pfam PF00892 EamA-like transporter family 2 129 1.9E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ATC04_16850 be23a3d6230fb786182c1a7fe232a3d6 298 SUPERFAMILY SSF103481 183 284 2.22E-15 T 11-10-2018 ATC04_16850 be23a3d6230fb786182c1a7fe232a3d6 298 SUPERFAMILY SSF103481 40 132 2.22E-5 T 11-10-2018 ATC04_05085 cef5aeb4bb17ce2583bbd92bcc81d4fb 317 Gene3D G3DSA:3.60.21.10 58 268 5.1E-11 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ATC04_05085 cef5aeb4bb17ce2583bbd92bcc81d4fb 317 Pfam PF00149 Calcineurin-like phosphoesterase 60 248 1.8E-7 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ATC04_05085 cef5aeb4bb17ce2583bbd92bcc81d4fb 317 SUPERFAMILY SSF56300 54 309 1.39E-26 T 11-10-2018 ATC04_06740 79e7f9c0ca7d72aeffb7a7988fb3b17e 78 SUPERFAMILY SSF54285 1 78 1.28E-10 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ATC04_06740 79e7f9c0ca7d72aeffb7a7988fb3b17e 78 Pfam PF02597 ThiS family 11 78 1.9E-10 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 ATC04_06740 79e7f9c0ca7d72aeffb7a7988fb3b17e 78 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 78 2.0E-14 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis ATC04_06740 79e7f9c0ca7d72aeffb7a7988fb3b17e 78 Gene3D G3DSA:3.10.20.30 1 78 3.3E-17 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ATC04_04765 1f7a6cf7a5380442209bc7d85d62a0a2 189 Pfam PF04314 Copper chaperone PCu(A)C 50 155 2.1E-25 T 11-10-2018 IPR007410 Copper chaperone PCuAC ATC04_04765 1f7a6cf7a5380442209bc7d85d62a0a2 189 SUPERFAMILY SSF110087 33 163 3.4E-29 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily ATC04_04765 1f7a6cf7a5380442209bc7d85d62a0a2 189 Gene3D G3DSA:2.60.40.1890 52 165 5.0E-27 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily ATC04_02470 3588a065a14ea1a18278b232aa6d3c87 521 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 192 266 3.2E-10 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 ATC04_02470 3588a065a14ea1a18278b232aa6d3c87 521 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 65 165 8.7E-15 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 ATC04_02470 3588a065a14ea1a18278b232aa6d3c87 521 SUPERFAMILY SSF53649 56 311 1.11E-41 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ATC04_02470 3588a065a14ea1a18278b232aa6d3c87 521 Gene3D G3DSA:3.40.720.10 59 176 1.3E-19 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ATC04_02470 3588a065a14ea1a18278b232aa6d3c87 521 Gene3D G3DSA:3.40.720.10 183 336 3.3E-26 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ATC04_04965 d126ee9cad72060d96adf810f9097c20 190 SUPERFAMILY SSF51064 133 188 1.24E-13 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 ATC04_04965 d126ee9cad72060d96adf810f9097c20 190 Pfam PF01025 GrpE 35 187 7.6E-34 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATC04_04965 d126ee9cad72060d96adf810f9097c20 190 Gene3D G3DSA:2.30.22.10 132 188 8.6E-15 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 ATC04_04965 d126ee9cad72060d96adf810f9097c20 190 ProSitePatterns PS01071 grpE protein signature. 143 186 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATC04_04965 d126ee9cad72060d96adf810f9097c20 190 PRINTS PR00773 GrpE protein signature 140 155 1.0E-19 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATC04_04965 d126ee9cad72060d96adf810f9097c20 190 PRINTS PR00773 GrpE protein signature 92 107 1.0E-19 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATC04_04965 d126ee9cad72060d96adf810f9097c20 190 PRINTS PR00773 GrpE protein signature 167 186 1.0E-19 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATC04_04965 d126ee9cad72060d96adf810f9097c20 190 PRINTS PR00773 GrpE protein signature 64 80 1.0E-19 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATC04_04965 d126ee9cad72060d96adf810f9097c20 190 Gene3D G3DSA:3.90.20.20 2 131 1.5E-16 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 ATC04_04965 d126ee9cad72060d96adf810f9097c20 190 SUPERFAMILY SSF58014 44 130 3.14E-18 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 ATC04_04965 d126ee9cad72060d96adf810f9097c20 190 Hamap MF_01151 Protein GrpE [grpE]. 2 188 16.167 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATC04_14785 3ccba06bf09ba1730a6caa2d79c2c75a 129 SMART SM00422 1 70 2.6E-23 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_14785 3ccba06bf09ba1730a6caa2d79c2c75a 129 SUPERFAMILY SSF46955 1 118 2.56E-30 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_14785 3ccba06bf09ba1730a6caa2d79c2c75a 129 Gene3D G3DSA:1.10.1660.10 1 124 8.9E-33 T 11-10-2018 ATC04_14785 3ccba06bf09ba1730a6caa2d79c2c75a 129 Pfam PF00376 MerR family regulatory protein 2 39 1.3E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_14785 3ccba06bf09ba1730a6caa2d79c2c75a 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.9E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_14785 3ccba06bf09ba1730a6caa2d79c2c75a 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.9E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_14785 3ccba06bf09ba1730a6caa2d79c2c75a 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.9E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATC04_14785 3ccba06bf09ba1730a6caa2d79c2c75a 129 Pfam PF09278 MerR, DNA binding 46 105 3.1E-16 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding ATC04_01330 43728d46359671b3451adcdb53d281ce 492 Gene3D G3DSA:1.20.1720.10 20 210 4.9E-30 T 11-10-2018 ATC04_01330 43728d46359671b3451adcdb53d281ce 492 SUPERFAMILY SSF103473 14 473 4.45E-45 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_01330 43728d46359671b3451adcdb53d281ce 492 Gene3D G3DSA:1.20.1250.20 298 473 4.5E-13 T 11-10-2018 ATC04_01330 43728d46359671b3451adcdb53d281ce 492 Pfam PF07690 Major Facilitator Superfamily 29 421 3.6E-36 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_07685 bcda9402924768f91c434af671f7b9ce 163 Gene3D G3DSA:3.40.630.30 1 129 1.3E-17 T 11-10-2018 ATC04_07685 bcda9402924768f91c434af671f7b9ce 163 SUPERFAMILY SSF55729 4 124 1.47E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_07685 bcda9402924768f91c434af671f7b9ce 163 Pfam PF00583 Acetyltransferase (GNAT) family 32 122 1.1E-9 T 11-10-2018 IPR000182 GNAT domain ATC04_03335 21ad7142f1c0136fa4996c8331b3a9a9 155 SUPERFAMILY SSF54593 10 154 1.25E-10 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_03335 21ad7142f1c0136fa4996c8331b3a9a9 155 Gene3D G3DSA:3.10.180.10 3 155 5.6E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_13725 0b7e89b11cd8ed3c8ce848cd95e664b2 307 SUPERFAMILY SSF161098 90 291 1.06E-17 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_13725 0b7e89b11cd8ed3c8ce848cd95e664b2 307 Gene3D G3DSA:1.10.3720.10 85 299 3.1E-22 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_13725 0b7e89b11cd8ed3c8ce848cd95e664b2 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 306 1.0E-35 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_17150 30e0c01f1050f83bae2a8af82a89f70b 171 Gene3D G3DSA:3.40.630.30 7 166 6.4E-27 T 11-10-2018 ATC04_17150 30e0c01f1050f83bae2a8af82a89f70b 171 SUPERFAMILY SSF55729 6 167 3.96E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_17150 30e0c01f1050f83bae2a8af82a89f70b 171 Pfam PF00583 Acetyltransferase (GNAT) family 29 145 2.9E-10 T 11-10-2018 IPR000182 GNAT domain ATC04_11825 a5e28d886c9ddde2e53624e6c0759101 228 Pfam PF01300 Telomere recombination 23 202 5.8E-42 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 ATC04_11825 a5e28d886c9ddde2e53624e6c0759101 228 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 9 209 3.3E-51 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 ATC04_11825 a5e28d886c9ddde2e53624e6c0759101 228 SUPERFAMILY SSF55821 11 214 9.16E-51 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ATC04_11825 a5e28d886c9ddde2e53624e6c0759101 228 Gene3D G3DSA:3.90.870.10 3 217 2.0E-64 T 11-10-2018 ATC04_10325 4ca1eeafbae7f1a113ae2c762f1fe17a 397 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 84 305 5.8E-58 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 ATC04_10325 4ca1eeafbae7f1a113ae2c762f1fe17a 397 Gene3D G3DSA:3.40.50.450 14 314 1.0E-84 T 11-10-2018 ATC04_10325 4ca1eeafbae7f1a113ae2c762f1fe17a 397 SUPERFAMILY SSF102405 125 313 3.97E-30 T 11-10-2018 ATC04_10325 4ca1eeafbae7f1a113ae2c762f1fe17a 397 Pfam PF02481 DNA recombination-mediator protein A 87 303 1.6E-62 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 ATC04_11210 5ba6e1dd841ab564f6936817a8e90977 307 TIGRFAM TIGR02271 TIGR02271: conserved domain 178 288 5.4E-15 T 11-10-2018 IPR019060 Domain of unknown function DUF2382 ATC04_11210 5ba6e1dd841ab564f6936817a8e90977 307 SUPERFAMILY SSF50346 16 108 1.35E-18 T 11-10-2018 IPR011033 PRC-barrel-like superfamily ATC04_11210 5ba6e1dd841ab564f6936817a8e90977 307 Gene3D G3DSA:2.30.30.240 5 82 1.8E-6 T 11-10-2018 ATC04_11210 5ba6e1dd841ab564f6936817a8e90977 307 Pfam PF09557 Domain of unknown function (DUF2382) 175 286 6.8E-31 T 11-10-2018 IPR019060 Domain of unknown function DUF2382 ATC04_11210 5ba6e1dd841ab564f6936817a8e90977 307 Pfam PF05239 PRC-barrel domain 16 76 2.8E-6 T 11-10-2018 IPR027275 PRC-barrel domain ATC04_00605 bd44487be939796e3d333b423b946e15 396 Gene3D G3DSA:3.40.50.2000 1 208 1.8E-29 T 11-10-2018 ATC04_00605 bd44487be939796e3d333b423b946e15 396 Gene3D G3DSA:3.40.50.2000 209 356 2.9E-27 T 11-10-2018 ATC04_00605 bd44487be939796e3d333b423b946e15 396 Pfam PF13439 Glycosyltransferase Family 4 14 188 8.6E-25 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ATC04_00605 bd44487be939796e3d333b423b946e15 396 SUPERFAMILY SSF53756 2 374 4.71E-68 T 11-10-2018 ATC04_00605 bd44487be939796e3d333b423b946e15 396 Pfam PF00534 Glycosyl transferases group 1 195 350 2.4E-25 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ATC04_02435 5fb9dc5a4f371f3519233513369ec176 438 Pfam PF13520 Amino acid permease 19 399 1.1E-44 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_02435 5fb9dc5a4f371f3519233513369ec176 438 Gene3D G3DSA:1.20.1740.10 10 436 1.9E-78 T 11-10-2018 ATC04_02435 5fb9dc5a4f371f3519233513369ec176 438 PIRSF PIRSF006060 2 436 9.2E-77 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_06785 4c09a8b1349e40f3eb3f772b342c5a8e 107 Pfam PF00037 4Fe-4S binding domain 34 56 1.2E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ATC04_06785 4c09a8b1349e40f3eb3f772b342c5a8e 107 Gene3D G3DSA:3.30.70.20 2 106 2.6E-46 T 11-10-2018 ATC04_06785 4c09a8b1349e40f3eb3f772b342c5a8e 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ATC04_06785 4c09a8b1349e40f3eb3f772b342c5a8e 107 SUPERFAMILY SSF54862 3 86 3.72E-22 T 11-10-2018 ATC04_06785 4c09a8b1349e40f3eb3f772b342c5a8e 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 3.6E-18 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 ATC04_06785 4c09a8b1349e40f3eb3f772b342c5a8e 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 3.6E-18 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 ATC04_06785 4c09a8b1349e40f3eb3f772b342c5a8e 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 3.6E-18 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 ATC04_10400 603684e403d2be27059e9460fae7c0aa 638 SMART SM00507 547 599 3.4E-5 T 11-10-2018 IPR003615 HNH nuclease ATC04_10400 603684e403d2be27059e9460fae7c0aa 638 Pfam PF02720 Domain of unknown function (DUF222) 452 556 9.6E-9 T 11-10-2018 IPR003870 Domain of unknown function DUF222 ATC04_10960 1c73857910b263d9553f16d060ac8575 480 Pfam PF13440 Polysaccharide biosynthesis protein 16 307 1.0E-59 T 11-10-2018 ATC04_12670 c00d576c31a1646bd195e8ed1f86fd81 137 Pfam PF13560 Helix-turn-helix domain 38 95 8.8E-10 T 11-10-2018 ATC04_12670 c00d576c31a1646bd195e8ed1f86fd81 137 SMART SM00530 42 97 3.7E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_12670 c00d576c31a1646bd195e8ed1f86fd81 137 SUPERFAMILY SSF47413 32 101 2.42E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_12670 c00d576c31a1646bd195e8ed1f86fd81 137 Gene3D G3DSA:1.10.260.40 33 108 9.1E-15 T 11-10-2018 ATC04_13425 4fa5f0e043be6421841b18a60bab5de2 111 SUPERFAMILY SSF46785 13 104 4.89E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_13425 4fa5f0e043be6421841b18a60bab5de2 111 Pfam PF03551 Transcriptional regulator PadR-like family 17 88 3.1E-21 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal ATC04_13425 4fa5f0e043be6421841b18a60bab5de2 111 Gene3D G3DSA:1.10.10.10 3 110 3.1E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_02310 d00c664c340b45b817405dca1292b885 546 Gene3D G3DSA:3.20.20.140 57 502 7.9E-118 T 11-10-2018 ATC04_02310 d00c664c340b45b817405dca1292b885 546 SUPERFAMILY SSF51338 1 545 4.65E-16 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_02310 d00c664c340b45b817405dca1292b885 546 Gene3D G3DSA:3.10.310.70 75 195 7.9E-118 T 11-10-2018 ATC04_02310 d00c664c340b45b817405dca1292b885 546 Gene3D G3DSA:2.30.40.10 8 519 7.9E-118 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ATC04_02310 d00c664c340b45b817405dca1292b885 546 SUPERFAMILY SSF51556 56 502 3.55E-32 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_02310 d00c664c340b45b817405dca1292b885 546 Pfam PF07969 Amidohydrolase family 45 543 6.6E-88 T 11-10-2018 IPR013108 Amidohydrolase 3 ATC04_00815 045c603bf103c3d15a02588eefbb4e71 688 Pfam PF01757 Acyltransferase family 13 349 1.1E-24 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ATC04_08490 6f4e63589844998adef9f4993e4aa2d1 196 SUPERFAMILY SSF110857 13 112 3.01E-5 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily ATC04_08490 6f4e63589844998adef9f4993e4aa2d1 196 Gene3D G3DSA:3.10.490.10 6 174 4.2E-6 T 11-10-2018 ATC04_01295 edd1db2375ff0b75e3918f9b80621bd9 326 Gene3D G3DSA:3.40.50.1820 1 323 2.2E-73 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_01295 edd1db2375ff0b75e3918f9b80621bd9 326 Pfam PF00561 alpha/beta hydrolase fold 25 125 2.4E-18 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_01295 edd1db2375ff0b75e3918f9b80621bd9 326 PRINTS PR00412 Epoxide hydrolase signature 257 273 1.6E-21 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_01295 edd1db2375ff0b75e3918f9b80621bd9 326 PRINTS PR00412 Epoxide hydrolase signature 31 49 1.6E-21 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_01295 edd1db2375ff0b75e3918f9b80621bd9 326 PRINTS PR00412 Epoxide hydrolase signature 295 317 1.6E-21 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_01295 edd1db2375ff0b75e3918f9b80621bd9 326 PRINTS PR00412 Epoxide hydrolase signature 111 124 1.6E-21 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_01295 edd1db2375ff0b75e3918f9b80621bd9 326 PRINTS PR00412 Epoxide hydrolase signature 51 66 1.6E-21 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ATC04_01295 edd1db2375ff0b75e3918f9b80621bd9 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 6.5E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_01295 edd1db2375ff0b75e3918f9b80621bd9 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 6.5E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_01295 edd1db2375ff0b75e3918f9b80621bd9 326 SUPERFAMILY SSF53474 3 319 1.71E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_11385 0df72b31f0197fd3e51a9e6856bd485d 124 Pfam PF02623 FliW protein 9 122 1.2E-16 T 11-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 ATC04_11385 0df72b31f0197fd3e51a9e6856bd485d 124 SUPERFAMILY SSF141457 9 122 4.32E-18 T 11-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily ATC04_11385 0df72b31f0197fd3e51a9e6856bd485d 124 Gene3D G3DSA:2.30.290.10 6 124 8.3E-18 T 11-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily ATC04_11455 3639ace011cd1357877e4788c317c60c 259 Gene3D G3DSA:3.30.450.180 107 259 3.0E-8 T 11-10-2018 ATC04_11455 3639ace011cd1357877e4788c317c60c 259 Pfam PF13560 Helix-turn-helix domain 10 87 9.1E-18 T 11-10-2018 ATC04_11455 3639ace011cd1357877e4788c317c60c 259 SMART SM00530 14 86 2.2E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_11455 3639ace011cd1357877e4788c317c60c 259 SUPERFAMILY SSF47413 36 85 1.64E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_12790 de2f1f3f59a1772918ac6d1776d1afb3 94 Pfam PF03795 YCII-related domain 3 85 3.0E-13 T 11-10-2018 IPR005545 YCII-related ATC04_12790 de2f1f3f59a1772918ac6d1776d1afb3 94 SUPERFAMILY SSF54909 1 87 9.12E-18 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_12790 de2f1f3f59a1772918ac6d1776d1afb3 94 Gene3D G3DSA:3.30.70.1060 2 92 3.0E-13 T 11-10-2018 ATC04_11085 6fd90539b7095490114c9ed6c0c86664 173 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 3 162 8.2E-44 T 11-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 ATC04_11085 6fd90539b7095490114c9ed6c0c86664 173 PIRSF PIRSF018427 1 169 1.4E-51 T 11-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 ATC04_11085 6fd90539b7095490114c9ed6c0c86664 173 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 1 173 32.491 T 11-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 ATC04_11085 6fd90539b7095490114c9ed6c0c86664 173 Pfam PF00293 NUDIX domain 28 158 2.1E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ATC04_11085 6fd90539b7095490114c9ed6c0c86664 173 SUPERFAMILY SSF55811 3 163 2.71E-43 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_11085 6fd90539b7095490114c9ed6c0c86664 173 Gene3D G3DSA:3.90.79.10 2 168 2.5E-50 T 11-10-2018 ATC04_15000 81becce5efec44db89c7b6a9b88770af 279 Pfam PF08223 PaaX-like protein C-terminal domain 184 274 8.4E-20 T 11-10-2018 IPR013225 PaaX-like, C-terminal ATC04_15000 81becce5efec44db89c7b6a9b88770af 279 PIRSF PIRSF020623 4 278 2.1E-56 T 11-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 ATC04_15000 81becce5efec44db89c7b6a9b88770af 279 Gene3D G3DSA:1.10.10.10 21 100 1.1E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_08750 28abbd6dd8d1e54fe86d0703a39b27f4 361 Hamap MF_01513 Putative phenylalanine aminotransferase [pat]. 5 351 43.316 T 11-10-2018 IPR024892 Putative phenylalanine aminotransferase ATC04_08750 28abbd6dd8d1e54fe86d0703a39b27f4 361 Pfam PF00155 Aminotransferase class I and II 27 345 6.6E-53 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATC04_08750 28abbd6dd8d1e54fe86d0703a39b27f4 361 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 350 48.428 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ATC04_08750 28abbd6dd8d1e54fe86d0703a39b27f4 361 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 214 223 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 ATC04_08750 28abbd6dd8d1e54fe86d0703a39b27f4 361 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 347 1.6E-87 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ATC04_08750 28abbd6dd8d1e54fe86d0703a39b27f4 361 SUPERFAMILY SSF53383 12 347 1.28E-73 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_08750 28abbd6dd8d1e54fe86d0703a39b27f4 361 Gene3D G3DSA:3.40.640.10 37 262 1.8E-114 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_08750 28abbd6dd8d1e54fe86d0703a39b27f4 361 Gene3D G3DSA:3.90.1150.10 10 342 1.8E-114 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_11070 749c069f1a8a6e9c802681d2bac78168 635 Gene3D G3DSA:2.60.120.260 261 394 5.6E-10 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily ATC04_11070 749c069f1a8a6e9c802681d2bac78168 635 Pfam PF03170 Bacterial cellulose synthase subunit 265 391 4.5E-9 T 11-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 ATC04_12135 a6dda0d5c310163810858f07cd45ff46 1439 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 51 406 3.0E-46 T 11-10-2018 IPR010090 Phage tail tape measure protein ATC04_12135 a6dda0d5c310163810858f07cd45ff46 1439 Pfam PF10145 Phage-related minor tail protein 94 280 8.6E-12 T 11-10-2018 IPR010090 Phage tail tape measure protein ATC04_00220 21651b8770a398a01bdaea6f14298d7d 157 Pfam PF11377 Protein of unknown function (DUF3180) 9 140 9.4E-24 T 11-10-2018 IPR021517 Protein of unknown function DUF3180 ATC04_08175 096dcddc71428cd199e79341028ae43e 223 SUPERFAMILY SSF69593 6 216 3.01E-45 T 11-10-2018 ATC04_08175 096dcddc71428cd199e79341028ae43e 223 Pfam PF01553 Acyltransferase 21 151 1.4E-24 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ATC04_08175 096dcddc71428cd199e79341028ae43e 223 SMART SM00563 35 154 3.9E-32 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ATC04_08800 6369b7aae4e26147097844c5e3239dea 862 Pfam PF13449 Esterase-like activity of phytase 475 733 1.3E-42 T 11-10-2018 IPR027372 Phytase-like domain ATC04_08800 6369b7aae4e26147097844c5e3239dea 862 SUPERFAMILY SSF51004 70 522 1.33E-20 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily ATC04_08800 6369b7aae4e26147097844c5e3239dea 862 Gene3D G3DSA:2.130.10.10 63 200 5.5E-6 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ATC04_08800 6369b7aae4e26147097844c5e3239dea 862 Gene3D G3DSA:2.130.10.10 235 578 6.3E-6 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ATC04_02605 f23e62d9481e49b092d7862b34902898 150 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 71 129 3.6E-16 T 11-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal ATC04_02605 f23e62d9481e49b092d7862b34902898 150 SUPERFAMILY SSF50249 15 138 2.23E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_02605 f23e62d9481e49b092d7862b34902898 150 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 37 62 7.2E-8 T 11-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal ATC04_13635 4094c45c53932af8dc9f5f8dbb2486ed 443 Pfam PF07670 Nucleoside recognition 129 226 1.8E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ATC04_13410 10c51b022227f120aacc3d71fe81af1c 438 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 5 340 3.9E-107 T 11-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase ATC04_13410 10c51b022227f120aacc3d71fe81af1c 438 Gene3D G3DSA:3.50.50.60 2 420 5.9E-114 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_13410 10c51b022227f120aacc3d71fe81af1c 438 SUPERFAMILY SSF51905 4 270 6.72E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_13410 10c51b022227f120aacc3d71fe81af1c 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.2E-5 T 11-10-2018 ATC04_13410 10c51b022227f120aacc3d71fe81af1c 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 2.2E-5 T 11-10-2018 ATC04_13410 10c51b022227f120aacc3d71fe81af1c 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 193 211 2.2E-5 T 11-10-2018 ATC04_13410 10c51b022227f120aacc3d71fe81af1c 438 SUPERFAMILY SSF51905 279 372 3.11E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_10905 e5513340e0fe27c95d06d838b5658008 343 SUPERFAMILY SSF82171 128 330 4.32E-10 T 11-10-2018 ATC04_10905 e5513340e0fe27c95d06d838b5658008 343 Gene3D G3DSA:2.120.10.30 187 340 2.1E-8 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ATC04_01555 569926a039d92c1ae0c8d2de94fe6d93 271 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 94 265 2.6E-11 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ATC04_01555 569926a039d92c1ae0c8d2de94fe6d93 271 SUPERFAMILY SSF56529 13 266 6.02E-73 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_01555 569926a039d92c1ae0c8d2de94fe6d93 271 Gene3D G3DSA:3.90.850.10 10 269 6.6E-78 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_15015 81fd20fd87f6cffdc9a56620d59de9c0 391 Pfam PF03631 Virulence factor BrkB 26 289 2.5E-46 T 11-10-2018 IPR017039 Virulence factor BrkB ATC04_15015 81fd20fd87f6cffdc9a56620d59de9c0 391 PIRSF PIRSF035875 349 388 670.0 T 11-10-2018 IPR017039 Virulence factor BrkB ATC04_15015 81fd20fd87f6cffdc9a56620d59de9c0 391 PIRSF PIRSF035875 1 314 6.9E-60 T 11-10-2018 IPR017039 Virulence factor BrkB ATC04_16640 e0f57d7876d38738e9eed46961fdc75f 544 Gene3D G3DSA:3.40.190.10 21 303 1.4E-50 T 11-10-2018 ATC04_16640 e0f57d7876d38738e9eed46961fdc75f 544 PIRSF PIRSF002741 6 533 2.4E-64 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ATC04_16640 e0f57d7876d38738e9eed46961fdc75f 544 SUPERFAMILY SSF53850 44 540 4.34E-90 T 11-10-2018 ATC04_16640 e0f57d7876d38738e9eed46961fdc75f 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 91 464 2.1E-66 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ATC04_16640 e0f57d7876d38738e9eed46961fdc75f 544 Gene3D G3DSA:3.10.105.10 304 512 2.6E-38 T 11-10-2018 ATC04_14765 1675439d5a203edfc3ac6a5af4d46498 201 Gene3D G3DSA:1.20.1260.10 46 201 2.8E-52 T 11-10-2018 IPR012347 Ferritin-like ATC04_14765 1675439d5a203edfc3ac6a5af4d46498 201 Pfam PF03713 Domain of unknown function (DUF305) 57 198 3.4E-47 T 11-10-2018 IPR005183 Domain of unknown function DUF305 ATC04_02690 1a221ce65fafb4ef043b86b9ff4e1d65 395 SUPERFAMILY SSF103473 9 393 5.49E-47 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_02690 1a221ce65fafb4ef043b86b9ff4e1d65 395 Gene3D G3DSA:1.20.1250.20 14 193 1.1E-25 T 11-10-2018 ATC04_02690 1a221ce65fafb4ef043b86b9ff4e1d65 395 Pfam PF07690 Major Facilitator Superfamily 20 245 9.6E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_02690 1a221ce65fafb4ef043b86b9ff4e1d65 395 Gene3D G3DSA:1.20.1250.20 216 395 3.8E-8 T 11-10-2018 ATC04_03490 df2c2a19bfb63d40bee04dcca71f2167 134 SUPERFAMILY SSF54593 5 129 9.5E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_03490 df2c2a19bfb63d40bee04dcca71f2167 134 Gene3D G3DSA:3.10.180.10 8 134 6.6E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_04845 45f8f2acc7df40a4971deb63c473bd9a 289 Gene3D G3DSA:3.30.1380.10 26 225 7.3E-66 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ATC04_04845 45f8f2acc7df40a4971deb63c473bd9a 289 SUPERFAMILY SSF55166 68 209 1.6E-35 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ATC04_04845 45f8f2acc7df40a4971deb63c473bd9a 289 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 72 201 1.9E-40 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 ATC04_01275 59be4b766e64fa9bfcdbe7a8bf0259f8 361 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 16 345 1.8E-130 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ATC04_01275 59be4b766e64fa9bfcdbe7a8bf0259f8 361 Gene3D G3DSA:1.20.1530.20 13 351 2.9E-25 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily ATC04_01275 59be4b766e64fa9bfcdbe7a8bf0259f8 361 PIRSF PIRSF005508 4 358 1.7E-136 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ATC04_01275 59be4b766e64fa9bfcdbe7a8bf0259f8 361 Pfam PF01758 Sodium Bile acid symporter family 61 257 1.8E-57 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ATC04_16565 9f5422b0522813d20f954f7407f375a4 269 Gene3D G3DSA:3.40.50.720 8 268 2.1E-63 T 11-10-2018 ATC04_16565 9f5422b0522813d20f954f7407f375a4 269 SUPERFAMILY SSF51735 21 266 3.26E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_16565 9f5422b0522813d20f954f7407f375a4 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 213 2.9E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16565 9f5422b0522813d20f954f7407f375a4 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 194 2.9E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16565 9f5422b0522813d20f954f7407f375a4 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 2.9E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16565 9f5422b0522813d20f954f7407f375a4 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 2.9E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16565 9f5422b0522813d20f954f7407f375a4 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 230 250 2.9E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16565 9f5422b0522813d20f954f7407f375a4 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 165 2.9E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16565 9f5422b0522813d20f954f7407f375a4 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 28 266 5.1E-50 T 11-10-2018 ATC04_16565 9f5422b0522813d20f954f7407f375a4 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 1.1E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16565 9f5422b0522813d20f954f7407f375a4 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 194 1.1E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_16565 9f5422b0522813d20f954f7407f375a4 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 163 1.1E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_17360 532138db40109002c743ceaa30bf3d74 323 SUPERFAMILY SSF55961 177 323 1.65E-26 T 11-10-2018 ATC04_17360 532138db40109002c743ceaa30bf3d74 323 Gene3D G3DSA:3.30.530.20 171 323 3.3E-28 T 11-10-2018 IPR023393 START-like domain superfamily ATC04_17360 532138db40109002c743ceaa30bf3d74 323 SUPERFAMILY SSF55961 10 159 4.07E-26 T 11-10-2018 ATC04_17360 532138db40109002c743ceaa30bf3d74 323 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 190 323 2.1E-13 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like ATC04_17360 532138db40109002c743ceaa30bf3d74 323 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 23 159 1.6E-16 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like ATC04_17360 532138db40109002c743ceaa30bf3d74 323 Gene3D G3DSA:3.30.530.20 1 162 1.9E-34 T 11-10-2018 IPR023393 START-like domain superfamily ATC04_14815 2e4fb67faef0b9e70e571a6260b4b6ca 109 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 9 75 2.7E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_08145 a739b4abb42ddbe09e67bea5810a022b 486 Pfam PF05114 Protein of unknown function (DUF692) 13 257 1.3E-38 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 ATC04_08145 a739b4abb42ddbe09e67bea5810a022b 486 Gene3D G3DSA:3.20.20.150 8 265 3.2E-56 T 11-10-2018 ATC04_08145 a739b4abb42ddbe09e67bea5810a022b 486 SUPERFAMILY SSF51658 54 239 1.37E-5 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ATC04_04335 ee21126f71d8e8fcf5f3ab66cbbdb40d 261 Pfam PF00561 alpha/beta hydrolase fold 22 123 1.3E-20 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_04335 ee21126f71d8e8fcf5f3ab66cbbdb40d 261 Gene3D G3DSA:3.40.50.1820 4 259 8.1E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_04335 ee21126f71d8e8fcf5f3ab66cbbdb40d 261 SUPERFAMILY SSF53474 16 257 7.81E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_11895 7b536495ce7b11709c2b0bb68eec4031 142 Pfam PF01230 HIT domain 11 100 2.3E-16 T 11-10-2018 IPR001310 Histidine triad (HIT) protein ATC04_11895 7b536495ce7b11709c2b0bb68eec4031 142 SUPERFAMILY SSF54197 3 130 7.42E-30 T 11-10-2018 IPR036265 HIT-like superfamily ATC04_11895 7b536495ce7b11709c2b0bb68eec4031 142 Gene3D G3DSA:3.30.428.10 1 133 3.4E-32 T 11-10-2018 IPR036265 HIT-like superfamily ATC04_11895 7b536495ce7b11709c2b0bb68eec4031 142 PRINTS PR00332 Histidine triad family signature 4 20 5.9E-11 T 11-10-2018 IPR001310 Histidine triad (HIT) protein ATC04_11895 7b536495ce7b11709c2b0bb68eec4031 142 PRINTS PR00332 Histidine triad family signature 87 97 5.9E-11 T 11-10-2018 IPR001310 Histidine triad (HIT) protein ATC04_11895 7b536495ce7b11709c2b0bb68eec4031 142 PRINTS PR00332 Histidine triad family signature 25 43 5.9E-11 T 11-10-2018 IPR001310 Histidine triad (HIT) protein ATC04_13675 04b231f8aa330cb3531970d4f4d0ab66 399 Pfam PF00155 Aminotransferase class I and II 47 394 1.9E-69 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATC04_13675 04b231f8aa330cb3531970d4f4d0ab66 399 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 396 1.1E-181 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 ATC04_13675 04b231f8aa330cb3531970d4f4d0ab66 399 Gene3D G3DSA:3.90.1150.10 44 395 1.4E-132 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_13675 04b231f8aa330cb3531970d4f4d0ab66 399 Gene3D G3DSA:3.40.640.10 62 304 1.4E-132 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_13675 04b231f8aa330cb3531970d4f4d0ab66 399 SUPERFAMILY SSF53383 8 396 1.18E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_13675 04b231f8aa330cb3531970d4f4d0ab66 399 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 249 258 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 ATC04_13675 04b231f8aa330cb3531970d4f4d0ab66 399 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 399 51.717 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 ATC04_04985 4ae72ed8531fb05917ad0cc44a264e19 285 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 30 284 28.394 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 ATC04_04985 4ae72ed8531fb05917ad0cc44a264e19 285 SUPERFAMILY SSF53335 81 218 8.44E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_04985 4ae72ed8531fb05917ad0cc44a264e19 285 Pfam PF02390 Putative methyltransferase 80 218 3.0E-44 T 11-10-2018 ATC04_04985 4ae72ed8531fb05917ad0cc44a264e19 285 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 74 216 5.2E-42 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 ATC04_09480 ba90e1f49f501f6e88e86b6e93f11d63 319 Gene3D G3DSA:3.40.50.1820 34 316 8.9E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_09480 ba90e1f49f501f6e88e86b6e93f11d63 319 SUPERFAMILY SSF53474 38 314 2.16E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_09480 ba90e1f49f501f6e88e86b6e93f11d63 319 Pfam PF12146 Serine aminopeptidase, S33 43 295 1.5E-24 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 ATC04_04545 0b67799b687bc6983c152c251c834969 481 Pfam PF01266 FAD dependent oxidoreductase 54 416 1.8E-48 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATC04_04545 0b67799b687bc6983c152c251c834969 481 Gene3D G3DSA:3.30.9.10 148 378 2.6E-49 T 11-10-2018 ATC04_04545 0b67799b687bc6983c152c251c834969 481 SUPERFAMILY SSF51905 30 320 5.5E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_04545 0b67799b687bc6983c152c251c834969 481 Gene3D G3DSA:3.50.50.60 54 418 2.6E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_09635 85224878ed80f72634ff0837e9162bcc 928 Gene3D G3DSA:3.40.50.300 7 206 6.4E-64 T 11-10-2018 ATC04_09635 85224878ed80f72634ff0837e9162bcc 928 Pfam PF08148 DSHCT (NUC185) domain 758 921 3.4E-31 T 11-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal ATC04_09635 85224878ed80f72634ff0837e9162bcc 928 Pfam PF13234 rRNA-processing arch domain 496 597 4.2E-5 T 11-10-2018 IPR025696 rRNA-processing arch domain ATC04_09635 85224878ed80f72634ff0837e9162bcc 928 Gene3D G3DSA:1.10.3380.30 709 921 1.0E-13 T 11-10-2018 ATC04_09635 85224878ed80f72634ff0837e9162bcc 928 SMART SM01142 754 926 1.4E-50 T 11-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal ATC04_09635 85224878ed80f72634ff0837e9162bcc 928 SMART SM00487 29 214 1.2E-34 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_09635 85224878ed80f72634ff0837e9162bcc 928 SUPERFAMILY SSF52540 44 454 4.41E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09635 85224878ed80f72634ff0837e9162bcc 928 SMART SM00490 347 439 3.8E-11 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_09635 85224878ed80f72634ff0837e9162bcc 928 Gene3D G3DSA:3.40.50.300 207 470 1.7E-56 T 11-10-2018 ATC04_09635 85224878ed80f72634ff0837e9162bcc 928 Pfam PF00270 DEAD/DEAH box helicase 35 182 2.4E-22 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATC04_04235 1395d761bf7f992cb1611bcd809c6330 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 6 325 3.3E-120 T 11-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 ATC04_04235 1395d761bf7f992cb1611bcd809c6330 333 Pfam PF00296 Luciferase-like monooxygenase 22 298 1.1E-36 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ATC04_04235 1395d761bf7f992cb1611bcd809c6330 333 SUPERFAMILY SSF51679 5 323 4.36E-74 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_04235 1395d761bf7f992cb1611bcd809c6330 333 Gene3D G3DSA:3.20.20.30 1 331 4.5E-90 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_00585 f05e8faa4ef15a15c4be3e36b2e2b022 181 SUPERFAMILY SSF50891 8 177 6.57E-56 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ATC04_00585 f05e8faa4ef15a15c4be3e36b2e2b022 181 Gene3D G3DSA:2.40.100.10 4 179 4.5E-67 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ATC04_00585 f05e8faa4ef15a15c4be3e36b2e2b022 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 135 5.6E-23 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ATC04_00585 f05e8faa4ef15a15c4be3e36b2e2b022 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 5.6E-23 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ATC04_00585 f05e8faa4ef15a15c4be3e36b2e2b022 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 108 123 5.6E-23 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ATC04_00585 f05e8faa4ef15a15c4be3e36b2e2b022 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 22 37 5.6E-23 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ATC04_00585 f05e8faa4ef15a15c4be3e36b2e2b022 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 5.6E-23 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ATC04_00585 f05e8faa4ef15a15c4be3e36b2e2b022 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 10 176 1.5E-41 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ATC04_00585 f05e8faa4ef15a15c4be3e36b2e2b022 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 ATC04_00585 f05e8faa4ef15a15c4be3e36b2e2b022 181 PIRSF PIRSF001467 1 180 6.3E-54 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 ATC04_11630 1b0644eb9ac817e347c680970071ae51 561 Pfam PF08757 CotH kinase protein 114 499 4.0E-27 T 11-10-2018 IPR014867 Spore coat protein CotH ATC04_10855 82d86d73d2129289924e225b47db303b 330 Pfam PF00535 Glycosyl transferase family 2 10 131 1.2E-14 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATC04_10855 82d86d73d2129289924e225b47db303b 330 SUPERFAMILY SSF53448 9 235 3.0E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_10855 82d86d73d2129289924e225b47db303b 330 Gene3D G3DSA:3.90.550.10 7 226 5.3E-21 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_02760 a397729d38011ffdba55e82fe45ce2dd 482 PIRSF PIRSF006060 2 475 1.2E-84 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_02760 a397729d38011ffdba55e82fe45ce2dd 482 Pfam PF13520 Amino acid permease 19 444 3.5E-44 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_02760 a397729d38011ffdba55e82fe45ce2dd 482 Gene3D G3DSA:1.20.1740.10 15 463 2.2E-71 T 11-10-2018 ATC04_04240 7ef97736839c6990cda2fb3ae21ff11f 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.0E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_04240 7ef97736839c6990cda2fb3ae21ff11f 67 SMART SM00357 3 67 6.5E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ATC04_04240 7ef97736839c6990cda2fb3ae21ff11f 67 Gene3D G3DSA:2.40.50.140 1 66 9.5E-30 T 11-10-2018 ATC04_04240 7ef97736839c6990cda2fb3ae21ff11f 67 PIRSF PIRSF002599 1 67 3.0E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 ATC04_04240 7ef97736839c6990cda2fb3ae21ff11f 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site ATC04_04240 7ef97736839c6990cda2fb3ae21ff11f 67 PRINTS PR00050 Cold shock protein signature 25 34 7.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_04240 7ef97736839c6990cda2fb3ae21ff11f 67 PRINTS PR00050 Cold shock protein signature 40 58 7.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_04240 7ef97736839c6990cda2fb3ae21ff11f 67 PRINTS PR00050 Cold shock protein signature 4 19 7.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATC04_04240 7ef97736839c6990cda2fb3ae21ff11f 67 SUPERFAMILY SSF50249 1 66 4.29E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_16755 0c84de754a2e91a0015b6fbfe902a24c 320 Gene3D G3DSA:1.10.3470.10 1 318 3.4E-87 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_16755 0c84de754a2e91a0015b6fbfe902a24c 320 Pfam PF01032 FecCD transport family 5 313 1.4E-84 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ATC04_16755 0c84de754a2e91a0015b6fbfe902a24c 320 SUPERFAMILY SSF81345 2 312 1.83E-73 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ATC04_00845 14afbcfee277643c2e2ef603b6f0897f 81 SUPERFAMILY SSF47413 1 53 1.27E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_00845 14afbcfee277643c2e2ef603b6f0897f 81 Gene3D G3DSA:1.10.260.40 1 49 1.2E-5 T 11-10-2018 ATC04_13290 9305978b24eba02ce49bd13126d23d01 410 Gene3D G3DSA:3.90.550.10 30 262 3.6E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_13290 9305978b24eba02ce49bd13126d23d01 410 SUPERFAMILY SSF53448 44 303 3.16E-62 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_13290 9305978b24eba02ce49bd13126d23d01 410 Pfam PF13641 Glycosyltransferase like family 2 51 273 1.2E-32 T 11-10-2018 ATC04_12545 2493c048b0a2393ec5825bab29bb50a4 359 SUPERFAMILY SSF55681 113 356 1.56E-76 T 11-10-2018 ATC04_12545 2493c048b0a2393ec5825bab29bb50a4 359 Gene3D G3DSA:3.30.930.10 28 357 3.3E-108 T 11-10-2018 ATC04_12545 2493c048b0a2393ec5825bab29bb50a4 359 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 62 354 5.6E-89 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ATC04_12545 2493c048b0a2393ec5825bab29bb50a4 359 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 41 107 2.1E-14 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ATC04_12545 2493c048b0a2393ec5825bab29bb50a4 359 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 29 355 43.369 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 ATC04_12545 2493c048b0a2393ec5825bab29bb50a4 359 SUPERFAMILY SSF46589 33 117 1.94E-13 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ATC04_12545 2493c048b0a2393ec5825bab29bb50a4 359 Pfam PF01409 tRNA synthetases class II core domain (F) 113 355 7.4E-100 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 ATC04_04465 0c15b275fb67750ca77d3b083b510f05 480 Pfam PF13520 Amino acid permease 26 432 2.4E-50 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_04465 0c15b275fb67750ca77d3b083b510f05 480 PIRSF PIRSF006060 4 477 7.4E-81 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_04465 0c15b275fb67750ca77d3b083b510f05 480 Gene3D G3DSA:1.20.1740.10 16 476 6.7E-81 T 11-10-2018 ATC04_06420 32c9ee39bd0547344e955e29bce6a0c5 643 Pfam PF02720 Domain of unknown function (DUF222) 474 553 4.2E-7 T 11-10-2018 IPR003870 Domain of unknown function DUF222 ATC04_06420 32c9ee39bd0547344e955e29bce6a0c5 643 SMART SM00507 544 596 2.3E-7 T 11-10-2018 IPR003615 HNH nuclease ATC04_16630 9a1fee370e1215004a7ecd726053b3c3 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 261 1.3E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_16630 9a1fee370e1215004a7ecd726053b3c3 264 SUPERFAMILY SSF161098 61 248 1.44E-22 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_16630 9a1fee370e1215004a7ecd726053b3c3 264 Gene3D G3DSA:1.10.3720.10 55 263 1.9E-17 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_11410 bae6f693bbb43bf12f224ca1c238c8b8 169 Pfam PF00583 Acetyltransferase (GNAT) family 32 127 7.4E-10 T 11-10-2018 IPR000182 GNAT domain ATC04_11410 bae6f693bbb43bf12f224ca1c238c8b8 169 Gene3D G3DSA:3.40.630.30 1 168 9.0E-36 T 11-10-2018 ATC04_11410 bae6f693bbb43bf12f224ca1c238c8b8 169 SUPERFAMILY SSF55729 1 135 3.55E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_04290 e6250aa7f2ac8fa7ca10c77012f34084 163 SUPERFAMILY SSF47240 5 161 4.83E-46 T 11-10-2018 IPR009078 Ferritin-like superfamily ATC04_04290 e6250aa7f2ac8fa7ca10c77012f34084 163 Pfam PF00210 Ferritin-like domain 9 144 2.9E-30 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ATC04_04290 e6250aa7f2ac8fa7ca10c77012f34084 163 Gene3D G3DSA:1.20.1260.10 3 163 4.9E-39 T 11-10-2018 IPR012347 Ferritin-like ATC04_00245 e3619c7634b4e39bda24027dc0884794 183 SUPERFAMILY SSF53271 7 183 1.97E-56 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ATC04_00245 e3619c7634b4e39bda24027dc0884794 183 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 13 177 3.0E-64 T 11-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 ATC04_00245 e3619c7634b4e39bda24027dc0884794 183 Gene3D G3DSA:3.40.50.2020 2 182 3.1E-66 T 11-10-2018 ATC04_00245 e3619c7634b4e39bda24027dc0884794 183 Pfam PF00156 Phosphoribosyl transferase domain 18 164 3.9E-25 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ATC04_13260 ee32f96433573e68b31299e1130f2307 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 307 1.3E-37 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_13260 ee32f96433573e68b31299e1130f2307 308 SUPERFAMILY SSF161098 90 289 2.35E-18 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_13260 ee32f96433573e68b31299e1130f2307 308 Gene3D G3DSA:1.10.3720.10 85 301 2.2E-23 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_14695 e9d0ca0f512187f60e6d497d3c8752d5 62 Pfam PF05532 CsbD-like 5 57 9.9E-16 T 11-10-2018 IPR008462 CsbD-like domain ATC04_14695 e9d0ca0f512187f60e6d497d3c8752d5 62 SUPERFAMILY SSF69047 5 58 1.57E-8 T 11-10-2018 IPR036629 YjbJ superfamily ATC04_14695 e9d0ca0f512187f60e6d497d3c8752d5 62 Gene3D G3DSA:1.10.1470.10 4 61 4.7E-6 T 11-10-2018 IPR036629 YjbJ superfamily ATC04_02200 f89626da257d3b9ab5ec6e4e3cfe0b51 243 Pfam PF02361 Cobalt transport protein 14 200 5.8E-14 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component ATC04_12435 ba2389961dbb40665c7585e1844d578a 439 Gene3D G3DSA:3.10.290.10 343 439 8.1E-25 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ATC04_12435 ba2389961dbb40665c7585e1844d578a 439 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 201 223 6.1E-26 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ATC04_12435 ba2389961dbb40665c7585e1844d578a 439 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 180 195 6.1E-26 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ATC04_12435 ba2389961dbb40665c7585e1844d578a 439 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 234 246 6.1E-26 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ATC04_12435 ba2389961dbb40665c7585e1844d578a 439 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 62 84 6.1E-26 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ATC04_12435 ba2389961dbb40665c7585e1844d578a 439 SUPERFAMILY SSF55174 343 436 4.32E-16 T 11-10-2018 ATC04_12435 ba2389961dbb40665c7585e1844d578a 439 Gene3D G3DSA:3.40.50.620 2 241 3.9E-83 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_12435 ba2389961dbb40665c7585e1844d578a 439 Pfam PF00579 tRNA synthetases class I (W and Y) 47 341 8.8E-77 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_12435 ba2389961dbb40665c7585e1844d578a 439 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 68 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATC04_12435 ba2389961dbb40665c7585e1844d578a 439 SUPERFAMILY SSF52374 21 341 1.13E-93 T 11-10-2018 ATC04_12435 ba2389961dbb40665c7585e1844d578a 439 Gene3D G3DSA:1.10.240.10 242 342 1.4E-34 T 11-10-2018 ATC04_12435 ba2389961dbb40665c7585e1844d578a 439 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 20 437 42.456 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 ATC04_12435 ba2389961dbb40665c7585e1844d578a 439 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 21 436 1.9E-112 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ATC04_10865 a250a4484d29109133afe2f8e228d785 442 Pfam PF01943 Polysaccharide biosynthesis protein 6 294 5.1E-15 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 ATC04_14645 64544ed16a60b7d3d5f06093045b36e5 330 Pfam PF08908 Domain of unknown function (DUF1852) 1 323 1.3E-166 T 11-10-2018 IPR015004 Protein of unknown function DUF1852 ATC04_18095 682582aa14bafa8d687c79b9e71c59f9 1198 SUPERFAMILY SSF63829 529 768 1.37E-10 T 11-10-2018 ATC04_18095 682582aa14bafa8d687c79b9e71c59f9 1198 Gene3D G3DSA:2.60.40.10 1030 1147 3.6E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold ATC04_06605 8c714586610498fe40a72049dfb2e13a 156 Gene3D G3DSA:2.40.128.20 1 156 2.9E-48 T 11-10-2018 IPR012674 Calycin ATC04_06605 8c714586610498fe40a72049dfb2e13a 156 Pfam PF08768 Domain of unknown function (DUF1794) 8 155 3.5E-37 T 11-10-2018 IPR014878 Domain of unknown function DUF1794 ATC04_06605 8c714586610498fe40a72049dfb2e13a 156 SUPERFAMILY SSF50814 3 156 1.67E-38 T 11-10-2018 IPR012674 Calycin ATC04_12850 334ff842777347c42ecf15824ec6e5b1 186 Pfam PF01048 Phosphorylase superfamily 104 178 3.3E-8 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ATC04_12850 334ff842777347c42ecf15824ec6e5b1 186 Gene3D G3DSA:3.40.50.1580 1 185 4.1E-30 T 11-10-2018 ATC04_12850 334ff842777347c42ecf15824ec6e5b1 186 SUPERFAMILY SSF53167 6 177 3.14E-23 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 ATC04_13690 172fced3ece8e863652ef0ba7c551dcd 403 Pfam PF07690 Major Facilitator Superfamily 20 305 2.5E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_13690 172fced3ece8e863652ef0ba7c551dcd 403 PRINTS PR01035 Tetracycline resistance protein signature 51 70 7.0E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_13690 172fced3ece8e863652ef0ba7c551dcd 403 PRINTS PR01035 Tetracycline resistance protein signature 140 162 7.0E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATC04_13690 172fced3ece8e863652ef0ba7c551dcd 403 Gene3D G3DSA:1.20.1250.20 16 391 4.9E-43 T 11-10-2018 ATC04_13690 172fced3ece8e863652ef0ba7c551dcd 403 SUPERFAMILY SSF103473 18 390 1.57E-48 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_07465 59984afcf2e1cd53e54f3a6fdcd6da87 333 SMART SM00729 71 277 9.5E-10 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ATC04_07465 59984afcf2e1cd53e54f3a6fdcd6da87 333 Hamap MF_00206 Lipoyl synthase [lipA]. 1 307 132.641 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATC04_07465 59984afcf2e1cd53e54f3a6fdcd6da87 333 Pfam PF04055 Radical SAM superfamily 81 235 9.7E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ATC04_07465 59984afcf2e1cd53e54f3a6fdcd6da87 333 TIGRFAM TIGR00510 lipA: lipoyl synthase 22 306 2.5E-99 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATC04_07465 59984afcf2e1cd53e54f3a6fdcd6da87 333 SUPERFAMILY SSF102114 42 309 5.36E-57 T 11-10-2018 ATC04_07465 59984afcf2e1cd53e54f3a6fdcd6da87 333 PIRSF PIRSF005963 2 320 1.8E-119 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATC04_07465 59984afcf2e1cd53e54f3a6fdcd6da87 333 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 24 60 3.7E-7 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATC04_07465 59984afcf2e1cd53e54f3a6fdcd6da87 333 Gene3D G3DSA:3.20.20.70 76 283 2.4E-13 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_14340 11aa87c4e5a6d73519d53d4693410ff9 272 PIRSF PIRSF009160 3 272 1.8E-67 T 11-10-2018 IPR010539 Protein of unknown function UCP009160 ATC04_14340 11aa87c4e5a6d73519d53d4693410ff9 272 Pfam PF12811 Bax inhibitor 1 like 38 269 5.7E-77 T 11-10-2018 IPR010539 Protein of unknown function UCP009160 ATC04_10890 a5228f09ffe905dedf5589309a8396a2 162 Gene3D G3DSA:3.40.50.620 4 150 1.1E-31 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATC04_10890 a5228f09ffe905dedf5589309a8396a2 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 16 80 1.2E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATC04_10890 a5228f09ffe905dedf5589309a8396a2 162 SUPERFAMILY SSF52374 15 148 2.33E-24 T 11-10-2018 ATC04_10890 a5228f09ffe905dedf5589309a8396a2 162 Pfam PF01467 Cytidylyltransferase-like 18 142 1.1E-17 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATC04_16555 2fdddebfa9751aea4f92b726209dc5f4 395 Gene3D G3DSA:3.40.50.80 266 393 3.8E-27 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ATC04_16555 2fdddebfa9751aea4f92b726209dc5f4 395 Pfam PF04954 Siderophore-interacting protein 271 387 3.8E-24 T 11-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain ATC04_16555 2fdddebfa9751aea4f92b726209dc5f4 395 Gene3D G3DSA:2.40.30.10 132 264 2.0E-21 T 11-10-2018 ATC04_16555 2fdddebfa9751aea4f92b726209dc5f4 395 Pfam PF08021 Siderophore-interacting FAD-binding domain 150 259 1.7E-18 T 11-10-2018 IPR013113 FAD-binding 9, siderophore-interacting ATC04_11420 2e0b83dc2244a953739b8cc5288ecd7b 381 SUPERFAMILY SSF53383 1 374 2.04E-85 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_11420 2e0b83dc2244a953739b8cc5288ecd7b 381 Gene3D G3DSA:3.40.640.10 59 233 1.1E-116 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_11420 2e0b83dc2244a953739b8cc5288ecd7b 381 Gene3D G3DSA:1.10.260.50 13 279 1.1E-116 T 11-10-2018 ATC04_11420 2e0b83dc2244a953739b8cc5288ecd7b 381 Gene3D G3DSA:3.90.1150.10 2 370 1.1E-116 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_11420 2e0b83dc2244a953739b8cc5288ecd7b 381 Pfam PF00266 Aminotransferase class-V 2 366 3.5E-60 T 11-10-2018 IPR000192 Aminotransferase class V domain ATC04_11420 2e0b83dc2244a953739b8cc5288ecd7b 381 PIRSF PIRSF005572 1 377 9.8E-105 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ATC04_08575 480424fee027256e2e1bbd2bdc46afe6 414 PIRSF PIRSF037434 8 414 1.6E-96 T 11-10-2018 IPR017205 Signal transduction histidine kinase, ChrS ATC04_08575 480424fee027256e2e1bbd2bdc46afe6 414 Pfam PF07730 Histidine kinase 208 273 8.8E-16 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ATC04_08575 480424fee027256e2e1bbd2bdc46afe6 414 SUPERFAMILY SSF55874 274 406 4.45E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_08575 480424fee027256e2e1bbd2bdc46afe6 414 Gene3D G3DSA:3.30.565.10 274 407 8.8E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_14985 061b89b60d9984541e6ea3b834774b2a 261 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 260 2.6E-108 T 11-10-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 ATC04_14985 061b89b60d9984541e6ea3b834774b2a 261 Gene3D G3DSA:3.90.850.10 1 260 1.9E-75 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_14985 061b89b60d9984541e6ea3b834774b2a 261 SUPERFAMILY SSF56529 2 260 1.13E-71 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_06070 6172e7fc8e3e1270149ece15ea4f8926 411 SUPERFAMILY SSF56024 68 219 2.36E-9 T 11-10-2018 ATC04_06070 6172e7fc8e3e1270149ece15ea4f8926 411 Pfam PF13091 PLD-like domain 76 211 1.3E-9 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ATC04_06070 6172e7fc8e3e1270149ece15ea4f8926 411 Pfam PF13091 PLD-like domain 301 396 2.8E-8 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ATC04_06070 6172e7fc8e3e1270149ece15ea4f8926 411 SUPERFAMILY SSF56024 268 400 7.18E-12 T 11-10-2018 ATC04_06070 6172e7fc8e3e1270149ece15ea4f8926 411 Gene3D G3DSA:3.30.870.10 65 226 5.4E-15 T 11-10-2018 ATC04_06070 6172e7fc8e3e1270149ece15ea4f8926 411 Gene3D G3DSA:3.30.870.10 260 400 1.6E-17 T 11-10-2018 ATC04_14650 a0a4dbde213c5a4eedbb8865c5fd24d9 346 SUPERFAMILY SSF51726 8 342 4.06E-66 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ATC04_14650 a0a4dbde213c5a4eedbb8865c5fd24d9 346 Gene3D G3DSA:3.20.20.210 1 345 2.2E-122 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ATC04_14650 a0a4dbde213c5a4eedbb8865c5fd24d9 346 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 6 330 3.6E-34 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 ATC04_15305 b9fb43b5f8a268055364dd8bdc07cce4 96 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 4 91 5.0E-18 T 11-10-2018 IPR010310 Type VII secretion system ESAT-6-like ATC04_15305 b9fb43b5f8a268055364dd8bdc07cce4 96 Gene3D G3DSA:1.10.287.1060 2 95 3.7E-18 T 11-10-2018 ATC04_15305 b9fb43b5f8a268055364dd8bdc07cce4 96 Pfam PF06013 Proteins of 100 residues with WXG 4 88 4.3E-16 T 11-10-2018 IPR010310 Type VII secretion system ESAT-6-like ATC04_15305 b9fb43b5f8a268055364dd8bdc07cce4 96 SUPERFAMILY SSF140453 3 94 1.96E-21 T 11-10-2018 IPR036689 ESAT-6-like superfamily ATC04_18555 dc740802c21087e7650e31075fd649e6 460 Gene3D G3DSA:3.40.50.300 204 443 1.5E-23 T 11-10-2018 ATC04_18555 dc740802c21087e7650e31075fd649e6 460 Pfam PF13614 AAA domain 205 301 7.8E-7 T 11-10-2018 IPR025669 AAA domain ATC04_18555 dc740802c21087e7650e31075fd649e6 460 SUPERFAMILY SSF52540 204 429 7.49E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_18315 dc740802c21087e7650e31075fd649e6 460 Gene3D G3DSA:3.40.50.300 204 443 1.5E-23 T 11-10-2018 ATC04_18315 dc740802c21087e7650e31075fd649e6 460 Pfam PF13614 AAA domain 205 301 7.8E-7 T 11-10-2018 IPR025669 AAA domain ATC04_18315 dc740802c21087e7650e31075fd649e6 460 SUPERFAMILY SSF52540 204 429 7.49E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_09385 d421909eb61e7386cbbedeebf1600c6f 330 Pfam PF06144 DNA polymerase III, delta subunit 23 178 5.0E-10 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 ATC04_09385 d421909eb61e7386cbbedeebf1600c6f 330 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 323 2.2E-34 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 ATC04_09385 d421909eb61e7386cbbedeebf1600c6f 330 Gene3D G3DSA:3.40.50.300 12 132 9.2E-13 T 11-10-2018 ATC04_09385 d421909eb61e7386cbbedeebf1600c6f 330 Gene3D G3DSA:1.20.272.10 205 327 4.1E-26 T 11-10-2018 ATC04_09385 d421909eb61e7386cbbedeebf1600c6f 330 SUPERFAMILY SSF48019 208 326 1.53E-21 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ATC04_15740 8cb4fd8db1ea3e88e258535145fb0cdb 150 Pfam PF02082 Transcriptional regulator 1 81 7.4E-13 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ATC04_15740 8cb4fd8db1ea3e88e258535145fb0cdb 150 Gene3D G3DSA:1.10.10.10 1 139 3.4E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_15740 8cb4fd8db1ea3e88e258535145fb0cdb 150 SUPERFAMILY SSF46785 2 134 7.94E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_07895 b550efe3f9ebbb896f25c77cdbe16ae6 219 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 16 101 1.7E-5 T 11-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 ATC04_07895 b550efe3f9ebbb896f25c77cdbe16ae6 219 TIGRFAM TIGR03085 TIGR03085: TIGR03085 family protein 12 210 7.0E-63 T 11-10-2018 IPR017519 Conserved hypothetical protein CHP03085 ATC04_07895 b550efe3f9ebbb896f25c77cdbe16ae6 219 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 10 194 5.8E-30 T 11-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type ATC04_07895 b550efe3f9ebbb896f25c77cdbe16ae6 219 SUPERFAMILY SSF109854 17 126 2.29E-5 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_13700 83bbc21dbaa3b3f2ebebc7324d8a7adc 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 189 2.2E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ATC04_13700 83bbc21dbaa3b3f2ebebc7324d8a7adc 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 187 6.0E-23 T 11-10-2018 ATC04_13700 83bbc21dbaa3b3f2ebebc7324d8a7adc 225 Gene3D G3DSA:3.40.50.1000 7 210 1.3E-50 T 11-10-2018 IPR023214 HAD superfamily ATC04_13700 83bbc21dbaa3b3f2ebebc7324d8a7adc 225 SUPERFAMILY SSF56784 4 220 3.25E-46 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_13700 83bbc21dbaa3b3f2ebebc7324d8a7adc 225 Gene3D G3DSA:1.10.150.240 20 86 1.3E-50 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ATC04_13335 5619de461a218ee835cb5a0d5cf970d2 190 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 152 184 1.3E-8 T 11-10-2018 IPR019933 DivIVA domain ATC04_13335 5619de461a218ee835cb5a0d5cf970d2 190 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 46 76 7.5E-7 T 11-10-2018 IPR019933 DivIVA domain ATC04_13335 5619de461a218ee835cb5a0d5cf970d2 190 TIGRFAM TIGR03543 divI1A_rptt_fam: DivIVA domain repeat protein 9 190 2.4E-65 T 11-10-2018 IPR019932 Conserved hypothetical protein CHP03543 ATC04_05060 d62b4fafd1c92ff26d5f4151d61e7327 321 Pfam PF06089 L-asparaginase II 8 301 6.8E-91 T 11-10-2018 IPR010349 L-asparaginase II ATC04_15365 76f6f4a035f41cfac809db5a924f590c 557 SUPERFAMILY SSF53335 17 229 6.17E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_15365 76f6f4a035f41cfac809db5a924f590c 557 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ATC04_15365 76f6f4a035f41cfac809db5a924f590c 557 Pfam PF02384 N-6 DNA Methylase 23 198 3.3E-16 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 ATC04_15365 76f6f4a035f41cfac809db5a924f590c 557 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 155 179 7.9E-19 T 11-10-2018 ATC04_15365 76f6f4a035f41cfac809db5a924f590c 557 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 116 128 7.9E-19 T 11-10-2018 ATC04_15365 76f6f4a035f41cfac809db5a924f590c 557 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 49 63 7.9E-19 T 11-10-2018 ATC04_15365 76f6f4a035f41cfac809db5a924f590c 557 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 25 41 7.9E-19 T 11-10-2018 ATC04_15365 76f6f4a035f41cfac809db5a924f590c 557 Gene3D G3DSA:3.40.50.150 28 242 1.1E-36 T 11-10-2018 ATC04_01140 7697cdb67a0882ffccc12348fab85034 416 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 33 379 8.3E-79 T 11-10-2018 IPR010640 Low temperature requirement A ATC04_05295 24d4003947e9bdb063de927e616f4ac9 251 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 22 229 4.7E-49 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 ATC04_05000 c9b615c534860ecb960d85c327a4d7f2 167 SUPERFAMILY SSF109854 16 158 1.98E-31 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_05000 c9b615c534860ecb960d85c327a4d7f2 167 Pfam PF04978 Protein of unknown function (DUF664) 18 159 4.2E-39 T 11-10-2018 IPR007061 Protein of unknown function DUF664 ATC04_05000 c9b615c534860ecb960d85c327a4d7f2 167 Gene3D G3DSA:1.20.120.450 4 160 4.2E-27 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_12990 9046e6ed14da7671a88db7d1150cfad6 342 Pfam PF01370 NAD dependent epimerase/dehydratase family 13 224 3.9E-31 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ATC04_12990 9046e6ed14da7671a88db7d1150cfad6 342 Gene3D G3DSA:3.40.50.720 3 337 3.5E-68 T 11-10-2018 ATC04_12990 9046e6ed14da7671a88db7d1150cfad6 342 SUPERFAMILY SSF51735 9 332 1.39E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_16355 eca2f090b6d1749025439fc29b7dfe2a 172 Pfam PF00583 Acetyltransferase (GNAT) family 55 145 5.0E-10 T 11-10-2018 IPR000182 GNAT domain ATC04_16355 eca2f090b6d1749025439fc29b7dfe2a 172 Gene3D G3DSA:3.40.630.30 3 156 1.1E-26 T 11-10-2018 ATC04_16355 eca2f090b6d1749025439fc29b7dfe2a 172 SUPERFAMILY SSF55729 7 154 1.89E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_14265 b34651356cfb52b6fff052a95762bdaa 188 Pfam PF13302 Acetyltransferase (GNAT) domain 5 159 2.8E-12 T 11-10-2018 IPR000182 GNAT domain ATC04_14265 b34651356cfb52b6fff052a95762bdaa 188 Gene3D G3DSA:3.40.630.30 65 160 3.6E-19 T 11-10-2018 ATC04_14265 b34651356cfb52b6fff052a95762bdaa 188 SUPERFAMILY SSF55729 38 171 1.95E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_17340 c7f9615373f36abe409bd7d96194c2e5 341 SUPERFAMILY SSF51735 142 308 4.06E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_17340 c7f9615373f36abe409bd7d96194c2e5 341 Pfam PF00107 Zinc-binding dehydrogenase 178 302 7.4E-27 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATC04_17340 c7f9615373f36abe409bd7d96194c2e5 341 Gene3D G3DSA:3.40.50.720 151 288 2.1E-129 T 11-10-2018 ATC04_17340 c7f9615373f36abe409bd7d96194c2e5 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 135 2.4E-31 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATC04_17340 c7f9615373f36abe409bd7d96194c2e5 341 Gene3D G3DSA:3.90.180.10 9 329 2.1E-129 T 11-10-2018 ATC04_17340 c7f9615373f36abe409bd7d96194c2e5 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ATC04_17340 c7f9615373f36abe409bd7d96194c2e5 341 SMART SM00829 11 337 5.3E-6 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATC04_17340 c7f9615373f36abe409bd7d96194c2e5 341 SUPERFAMILY SSF50129 1 183 1.07E-53 T 11-10-2018 IPR011032 GroES-like superfamily ATC04_01260 1daccb69b45c7e920d6609347cd33907 551 Pfam PF00501 AMP-binding enzyme 17 449 7.0E-96 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_01260 1daccb69b45c7e920d6609347cd33907 551 ProSitePatterns PS00455 Putative AMP-binding domain signature. 201 212 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_01260 1daccb69b45c7e920d6609347cd33907 551 Gene3D G3DSA:3.40.50.12780 2 445 7.9E-104 T 11-10-2018 ATC04_01260 1daccb69b45c7e920d6609347cd33907 551 Gene3D G3DSA:3.30.300.310 446 546 1.9E-25 T 11-10-2018 ATC04_01260 1daccb69b45c7e920d6609347cd33907 551 SUPERFAMILY SSF56801 5 543 5.89E-139 T 11-10-2018 ATC04_01260 1daccb69b45c7e920d6609347cd33907 551 Pfam PF13193 AMP-binding enzyme C-terminal domain 458 533 1.2E-12 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ATC04_08640 56192d9bd48a0113f1b3ed2708642c93 955 SUPERFAMILY SSF50249 293 376 2.11E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_08640 56192d9bd48a0113f1b3ed2708642c93 955 SMART SM00316 291 370 1.1E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 ATC04_08640 56192d9bd48a0113f1b3ed2708642c93 955 Pfam PF10150 Ribonuclease E/G family 372 643 7.4E-106 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 ATC04_08640 56192d9bd48a0113f1b3ed2708642c93 955 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 268 671 2.7E-151 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 ATC04_08640 56192d9bd48a0113f1b3ed2708642c93 955 Gene3D G3DSA:2.40.50.140 284 376 2.4E-27 T 11-10-2018 ATC04_01265 fa3af190b6e68dc90a80af10b483f4d3 474 Gene3D G3DSA:3.50.50.60 1 411 7.0E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_01265 fa3af190b6e68dc90a80af10b483f4d3 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 310 326 1.1E-7 T 11-10-2018 ATC04_01265 fa3af190b6e68dc90a80af10b483f4d3 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 211 229 1.1E-7 T 11-10-2018 ATC04_01265 fa3af190b6e68dc90a80af10b483f4d3 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.1E-7 T 11-10-2018 ATC04_01265 fa3af190b6e68dc90a80af10b483f4d3 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 211 236 1.0E-5 T 11-10-2018 ATC04_01265 fa3af190b6e68dc90a80af10b483f4d3 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 325 1.0E-5 T 11-10-2018 ATC04_01265 fa3af190b6e68dc90a80af10b483f4d3 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-5 T 11-10-2018 ATC04_01265 fa3af190b6e68dc90a80af10b483f4d3 474 Pfam PF01266 FAD dependent oxidoreductase 7 324 8.5E-10 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATC04_01265 fa3af190b6e68dc90a80af10b483f4d3 474 SUPERFAMILY SSF51905 7 406 2.59E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03830 3036925fb260e7ad874c6ae91ecd9c87 265 SUPERFAMILY SSF161098 70 253 6.41E-34 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_03830 3036925fb260e7ad874c6ae91ecd9c87 265 Gene3D G3DSA:1.10.3720.10 66 264 6.2E-31 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_03830 3036925fb260e7ad874c6ae91ecd9c87 265 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 17 263 9.1E-79 T 11-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 ATC04_03830 3036925fb260e7ad874c6ae91ecd9c87 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 263 9.4E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_10140 5d6df13a465068717aacd43faafdab25 129 Gene3D G3DSA:3.10.180.10 1 125 3.1E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_10140 5d6df13a465068717aacd43faafdab25 129 SUPERFAMILY SSF54593 2 126 1.31E-16 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_10140 5d6df13a465068717aacd43faafdab25 129 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 112 4.6E-8 T 11-10-2018 ATC04_15690 df27b42dd133652d40d3a5065d33e311 755 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 500 628 1.4E-31 T 11-10-2018 IPR025299 CstA, C-terminal domain ATC04_15690 df27b42dd133652d40d3a5065d33e311 755 Pfam PF02554 Carbon starvation protein CstA 65 441 1.5E-161 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 ATC04_15750 0575b92dd93c0e5b92aa737b8d017b00 370 SUPERFAMILY SSF53474 39 268 8.24E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_15750 0575b92dd93c0e5b92aa737b8d017b00 370 Gene3D G3DSA:3.40.50.1820 32 269 2.4E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_15750 0575b92dd93c0e5b92aa737b8d017b00 370 Pfam PF12697 Alpha/beta hydrolase family 41 259 4.3E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_09860 2c6f4a1822751a0cd6186a7e72aeb8e9 351 SUPERFAMILY SSF55681 94 347 3.69E-62 T 11-10-2018 ATC04_09860 2c6f4a1822751a0cd6186a7e72aeb8e9 351 Pfam PF03099 Biotin/lipoate A/B protein ligase family 155 265 1.7E-7 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ATC04_09860 2c6f4a1822751a0cd6186a7e72aeb8e9 351 Gene3D G3DSA:3.30.930.10 112 350 1.2E-54 T 11-10-2018 ATC04_09860 2c6f4a1822751a0cd6186a7e72aeb8e9 351 Gene3D G3DSA:3.30.390.50 1 90 1.3E-19 T 11-10-2018 ATC04_17135 45d56aefaa6419da56f0c682206f93ff 471 Pfam PF00860 Permease family 22 422 9.1E-25 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ATC04_13075 20daf1f4dca8501eca3aabbc05dce3bc 566 Gene3D G3DSA:1.20.1730.10 30 470 3.1E-51 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily ATC04_13075 20daf1f4dca8501eca3aabbc05dce3bc 566 Pfam PF00474 Sodium:solute symporter family 41 423 2.2E-27 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ATC04_18190 8cdc84d041502ac94f3249b1768a94a8 182 Pfam PF12802 MarR family 46 108 2.3E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_18190 8cdc84d041502ac94f3249b1768a94a8 182 SUPERFAMILY SSF46785 24 156 2.08E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_18190 8cdc84d041502ac94f3249b1768a94a8 182 Gene3D G3DSA:1.10.10.10 17 161 4.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_18190 8cdc84d041502ac94f3249b1768a94a8 182 SMART SM00347 40 144 9.7E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_16345 957e89813be2be7a0c6c38a04adcbe01 518 Pfam PF12844 Helix-turn-helix domain 53 111 1.2E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_16345 957e89813be2be7a0c6c38a04adcbe01 518 SMART SM00530 55 110 1.6E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_16345 957e89813be2be7a0c6c38a04adcbe01 518 SUPERFAMILY SSF47413 49 116 5.35E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_16345 957e89813be2be7a0c6c38a04adcbe01 518 Gene3D G3DSA:1.10.260.40 43 112 4.8E-18 T 11-10-2018 ATC04_16345 957e89813be2be7a0c6c38a04adcbe01 518 Pfam PF06114 IrrE N-terminal-like domain 246 344 3.5E-8 T 11-10-2018 IPR010359 IrrE N-terminal-like domain ATC04_06995 8a440e857a92e6a700790cdf37e83ec8 1114 Pfam PF13361 UvrD-like helicase C-terminal domain 346 776 1.4E-29 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ATC04_06995 8a440e857a92e6a700790cdf37e83ec8 1114 Gene3D G3DSA:3.40.50.300 400 497 4.6E-13 T 11-10-2018 ATC04_06995 8a440e857a92e6a700790cdf37e83ec8 1114 Gene3D G3DSA:3.40.50.300 19 190 2.0E-33 T 11-10-2018 ATC04_06995 8a440e857a92e6a700790cdf37e83ec8 1114 Gene3D G3DSA:3.40.50.300 226 366 4.4E-30 T 11-10-2018 ATC04_06995 8a440e857a92e6a700790cdf37e83ec8 1114 SUPERFAMILY SSF52540 19 798 1.47E-106 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_06995 8a440e857a92e6a700790cdf37e83ec8 1114 SUPERFAMILY SSF52980 940 1071 1.72E-6 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ATC04_06995 8a440e857a92e6a700790cdf37e83ec8 1114 Pfam PF12705 PD-(D/E)XK nuclease superfamily 935 1098 1.4E-12 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type ATC04_06995 8a440e857a92e6a700790cdf37e83ec8 1114 Pfam PF00580 UvrD/REP helicase N-terminal domain 22 331 4.0E-51 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ATC04_04830 a749077323cf5a91d4cb75bdaf9cfb6b 161 Pfam PF07179 SseB protein N-terminal domain 47 147 1.3E-12 T 11-10-2018 IPR009839 SseB protein N-terminal domain ATC04_07355 517d662e9df62ddc41397d6b5cb41495 244 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 102 - T 11-10-2018 IPR010916 TonB box, conserved site ATC04_07355 517d662e9df62ddc41397d6b5cb41495 244 Pfam PF08478 POTRA domain, FtsQ-type 48 113 1.3E-12 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type ATC04_04245 cfcd7eccae53e1f3bb27bcf3474dc7a4 505 Gene3D G3DSA:1.20.1250.20 276 505 2.4E-22 T 11-10-2018 ATC04_04245 cfcd7eccae53e1f3bb27bcf3474dc7a4 505 SUPERFAMILY SSF103473 10 500 6.67E-64 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_04245 cfcd7eccae53e1f3bb27bcf3474dc7a4 505 Gene3D G3DSA:1.20.1720.10 20 231 1.0E-39 T 11-10-2018 ATC04_04245 cfcd7eccae53e1f3bb27bcf3474dc7a4 505 Pfam PF07690 Major Facilitator Superfamily 28 414 1.8E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_07965 617ae08bf7643ef7bdc4c6ccd692c087 419 Pfam PF01384 Phosphate transporter family 21 325 3.8E-81 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 ATC04_00530 a5879f271b328a3de1d072207afae480 465 Pfam PF01098 Cell cycle protein 75 435 3.1E-71 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_00365 9eaa992c850c920c7d61feb949b6d61a 451 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 232 243 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ATC04_00365 9eaa992c850c920c7d61feb949b6d61a 451 SUPERFAMILY SSF53720 4 432 3.01E-111 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_00365 9eaa992c850c920c7d61feb949b6d61a 451 Pfam PF00171 Aldehyde dehydrogenase family 20 420 5.1E-77 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_00365 9eaa992c850c920c7d61feb949b6d61a 451 Gene3D G3DSA:3.40.605.10 12 421 7.9E-153 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_00365 9eaa992c850c920c7d61feb949b6d61a 451 Gene3D G3DSA:3.40.309.10 210 402 7.9E-153 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_00365 9eaa992c850c920c7d61feb949b6d61a 451 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 206 213 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ATC04_00365 9eaa992c850c920c7d61feb949b6d61a 451 PIRSF PIRSF036492 1 451 4.5E-160 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 ATC04_12835 425dda795be4c028125d8a153d57f879 473 Pfam PF08242 Methyltransferase domain 295 378 3.7E-9 T 11-10-2018 IPR013217 Methyltransferase type 12 ATC04_12835 425dda795be4c028125d8a153d57f879 473 SUPERFAMILY SSF53335 283 439 1.22E-15 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_12835 425dda795be4c028125d8a153d57f879 473 Gene3D G3DSA:3.30.1610.20 1 237 2.9E-93 T 11-10-2018 IPR038546 Hen1, N-terminal domain superfamily ATC04_12835 425dda795be4c028125d8a153d57f879 473 Gene3D G3DSA:3.40.50.150 263 473 7.4E-62 T 11-10-2018 ATC04_12835 425dda795be4c028125d8a153d57f879 473 Pfam PF12623 RNA repair, ligase-Pnkp-associating, region of Hen1 2 245 8.3E-97 T 11-10-2018 IPR024740 Hen1, N-terminal ATC04_12835 425dda795be4c028125d8a153d57f879 473 TIGRFAM TIGR04074 bacter_Hen1: 3' terminal RNA ribose 2'-O-methyltransferase Hen1 2 470 3.0E-186 T 11-10-2018 IPR024026 3'-RNA ribose 2'-O-methyltransferase, Hen1, bacterial ATC04_02240 092bd0ace261025f427d58a16fbae9d1 319 SUPERFAMILY SSF53098 77 249 1.47E-9 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_02240 092bd0ace261025f427d58a16fbae9d1 319 Pfam PF00665 Integrase core domain 77 210 7.8E-18 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_09130 79e53f7edf93032967e0559aecf7ad31 139 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 17 96 1.9E-17 T 11-10-2018 IPR003849 Preprotein translocase YajC ATC04_09130 79e53f7edf93032967e0559aecf7ad31 139 SMART SM01323 13 96 4.0E-21 T 11-10-2018 IPR003849 Preprotein translocase YajC ATC04_09130 79e53f7edf93032967e0559aecf7ad31 139 PRINTS PR01853 Bacterial YajC preprotein translocase signature 15 35 8.7E-5 T 11-10-2018 IPR003849 Preprotein translocase YajC ATC04_09130 79e53f7edf93032967e0559aecf7ad31 139 PRINTS PR01853 Bacterial YajC preprotein translocase signature 53 71 8.7E-5 T 11-10-2018 IPR003849 Preprotein translocase YajC ATC04_09130 79e53f7edf93032967e0559aecf7ad31 139 Pfam PF02699 Preprotein translocase subunit 18 93 6.3E-22 T 11-10-2018 IPR003849 Preprotein translocase YajC ATC04_10760 f8d2e17fa74eac06de5d37b3a5259a8b 230 Pfam PF00072 Response regulator receiver domain 9 124 7.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_10760 f8d2e17fa74eac06de5d37b3a5259a8b 230 SMART SM00448 7 124 3.7E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_10760 f8d2e17fa74eac06de5d37b3a5259a8b 230 SMART SM00421 165 222 1.3E-28 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10760 f8d2e17fa74eac06de5d37b3a5259a8b 230 Gene3D G3DSA:3.40.50.12740 7 227 8.1E-69 T 11-10-2018 ATC04_10760 f8d2e17fa74eac06de5d37b3a5259a8b 230 Pfam PF00196 Bacterial regulatory proteins, luxR family 167 222 1.1E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10760 f8d2e17fa74eac06de5d37b3a5259a8b 230 SUPERFAMILY SSF46894 160 227 7.82E-23 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_10760 f8d2e17fa74eac06de5d37b3a5259a8b 230 SUPERFAMILY SSF52172 7 143 1.42E-30 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_10760 f8d2e17fa74eac06de5d37b3a5259a8b 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 182 1.6E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10760 f8d2e17fa74eac06de5d37b3a5259a8b 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 198 1.6E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10760 f8d2e17fa74eac06de5d37b3a5259a8b 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 210 1.6E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_10760 f8d2e17fa74eac06de5d37b3a5259a8b 230 ProSitePatterns PS00622 LuxR-type HTH domain signature. 182 209 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_11585 53fccd2bb1b9726c6f8581786ba978b6 388 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 271 360 7.0E-7 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain ATC04_11585 53fccd2bb1b9726c6f8581786ba978b6 388 Gene3D G3DSA:3.60.21.10 1 270 2.3E-84 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ATC04_11585 53fccd2bb1b9726c6f8581786ba978b6 388 Pfam PF00149 Calcineurin-like phosphoesterase 1 91 9.7E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ATC04_11585 53fccd2bb1b9726c6f8581786ba978b6 388 SUPERFAMILY SSF56300 1 309 6.47E-54 T 11-10-2018 ATC04_11585 53fccd2bb1b9726c6f8581786ba978b6 388 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 247 3.6E-58 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 ATC04_14145 9b5f2f069a402cbbf041083f9bdb70ad 812 SUPERFAMILY SSF54001 433 603 9.25E-28 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ATC04_14145 9b5f2f069a402cbbf041083f9bdb70ad 812 SMART SM00460 504 597 2.9E-12 T 11-10-2018 IPR002931 Transglutaminase-like ATC04_14145 9b5f2f069a402cbbf041083f9bdb70ad 812 Pfam PF01841 Transglutaminase-like superfamily 463 595 1.1E-22 T 11-10-2018 IPR002931 Transglutaminase-like ATC04_15850 05e0d33ee345df5ab7f4de65040396a3 246 Gene3D G3DSA:3.40.50.2300 12 147 1.4E-34 T 11-10-2018 ATC04_15850 05e0d33ee345df5ab7f4de65040396a3 246 SMART SM00448 22 133 2.5E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_15850 05e0d33ee345df5ab7f4de65040396a3 246 SUPERFAMILY SSF52172 20 200 1.96E-38 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_15850 05e0d33ee345df5ab7f4de65040396a3 246 Gene3D G3DSA:1.10.10.10 148 246 5.1E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_15850 05e0d33ee345df5ab7f4de65040396a3 246 Pfam PF00072 Response regulator receiver domain 24 131 3.1E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_15850 05e0d33ee345df5ab7f4de65040396a3 246 SMART SM00862 168 242 2.8E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_15850 05e0d33ee345df5ab7f4de65040396a3 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 168 242 4.1E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATC04_11310 f8287f21acb4ed54a56fe1ce70e51d3e 442 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 356 9.3E-70 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_11310 f8287f21acb4ed54a56fe1ce70e51d3e 442 SMART SM00382 159 340 1.1E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_11310 f8287f21acb4ed54a56fe1ce70e51d3e 442 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 19 436 1.1E-150 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_11310 f8287f21acb4ed54a56fe1ce70e51d3e 442 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 347 356 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ATC04_11310 f8287f21acb4ed54a56fe1ce70e51d3e 442 SUPERFAMILY SSF52540 95 361 3.91E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_11310 f8287f21acb4ed54a56fe1ce70e51d3e 442 Gene3D G3DSA:3.40.50.12240 19 439 1.4E-131 T 11-10-2018 ATC04_00985 1b039c3a6d932fe63941a9f18ee5d18c 219 SUPERFAMILY SSF46689 2 74 8.72E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_00985 1b039c3a6d932fe63941a9f18ee5d18c 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 59 8.4E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_00985 1b039c3a6d932fe63941a9f18ee5d18c 219 Gene3D G3DSA:1.10.357.10 3 207 2.6E-22 T 11-10-2018 ATC04_11135 fbe3c635ea75b89628e74419caf178cc 203 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 1.4E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_11135 fbe3c635ea75b89628e74419caf178cc 203 PRINTS PR00598 Bacterial regulatory protein MarR family signature 156 176 1.4E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_11135 fbe3c635ea75b89628e74419caf178cc 203 PRINTS PR00598 Bacterial regulatory protein MarR family signature 126 142 1.4E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_11135 fbe3c635ea75b89628e74419caf178cc 203 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 122 1.4E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_11135 fbe3c635ea75b89628e74419caf178cc 203 SMART SM00347 62 166 1.9E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_11135 fbe3c635ea75b89628e74419caf178cc 203 SUPERFAMILY SSF46785 43 184 4.27E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_11135 fbe3c635ea75b89628e74419caf178cc 203 Gene3D G3DSA:1.10.10.10 22 183 5.4E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_11135 fbe3c635ea75b89628e74419caf178cc 203 Pfam PF12802 MarR family 75 130 8.5E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATC04_13400 be832e8d852edbd128623b3c20ba8dad 421 Pfam PF07690 Major Facilitator Superfamily 34 356 8.5E-18 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_13400 be832e8d852edbd128623b3c20ba8dad 421 SUPERFAMILY SSF103473 32 409 9.59E-28 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_13400 be832e8d852edbd128623b3c20ba8dad 421 Gene3D G3DSA:1.20.1250.20 14 195 5.8E-11 T 11-10-2018 ATC04_13400 be832e8d852edbd128623b3c20ba8dad 421 Gene3D G3DSA:1.20.1250.20 213 417 2.9E-13 T 11-10-2018 ATC04_09380 b0cd972215782445f43b87fe9330a8c5 756 Pfam PF03772 Competence protein 204 467 6.8E-42 T 11-10-2018 IPR004477 ComEC/Rec2-related protein ATC04_09380 b0cd972215782445f43b87fe9330a8c5 756 Gene3D G3DSA:3.60.15.10 510 750 1.5E-39 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_09380 b0cd972215782445f43b87fe9330a8c5 756 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 226 398 1.2E-18 T 11-10-2018 IPR004477 ComEC/Rec2-related protein ATC04_09380 b0cd972215782445f43b87fe9330a8c5 756 Pfam PF00753 Metallo-beta-lactamase superfamily 518 577 1.0E-5 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_09380 b0cd972215782445f43b87fe9330a8c5 756 SUPERFAMILY SSF56281 509 746 6.38E-28 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_08535 491f7b712e9f1e6f37909ae68bbc6a5d 291 Gene3D G3DSA:1.10.3720.10 78 277 9.0E-24 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_08535 491f7b712e9f1e6f37909ae68bbc6a5d 291 SUPERFAMILY SSF161098 78 267 4.06E-30 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_08535 491f7b712e9f1e6f37909ae68bbc6a5d 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 265 8.5E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_02425 0106783d7cb0b4821867b95b98a9290d 198 Pfam PF00857 Isochorismatase family 11 173 5.8E-31 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 ATC04_02425 0106783d7cb0b4821867b95b98a9290d 198 Gene3D G3DSA:3.40.50.850 1 191 8.6E-39 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ATC04_02425 0106783d7cb0b4821867b95b98a9290d 198 SUPERFAMILY SSF52499 6 189 1.57E-36 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ATC04_02935 03c11aeac223af15e61baf6598b68fa6 183 TIGRFAM TIGR04089 exp_by_SipW_III: alternate signal-mediated exported protein, RER_14450 family 1 180 7.5E-38 T 11-10-2018 IPR024006 Conserved hypothetical protein CHP04089 ATC04_02935 03c11aeac223af15e61baf6598b68fa6 183 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 10 44 2.2E-6 T 11-10-2018 IPR023833 Signal peptide, camelysin ATC04_16490 7286aa0a0fa1c6e90e67fe1c97381182 184 SUPERFAMILY SSF109854 5 165 1.36E-30 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_16490 7286aa0a0fa1c6e90e67fe1c97381182 184 Pfam PF04978 Protein of unknown function (DUF664) 18 166 2.3E-28 T 11-10-2018 IPR007061 Protein of unknown function DUF664 ATC04_16490 7286aa0a0fa1c6e90e67fe1c97381182 184 Gene3D G3DSA:1.20.120.450 8 169 7.6E-29 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_03915 7a3881d7c82863604805916f4531aa07 250 Gene3D G3DSA:3.40.50.720 1 246 7.5E-69 T 11-10-2018 ATC04_03915 7a3881d7c82863604805916f4531aa07 250 SUPERFAMILY SSF51735 3 244 2.44E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_03915 7a3881d7c82863604805916f4531aa07 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 181 8.6E-4 T 11-10-2018 ATC04_03915 7a3881d7c82863604805916f4531aa07 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.3E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03915 7a3881d7c82863604805916f4531aa07 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 2.3E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03915 7a3881d7c82863604805916f4531aa07 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 2.3E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03915 7a3881d7c82863604805916f4531aa07 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03915 7a3881d7c82863604805916f4531aa07 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 2.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03915 7a3881d7c82863604805916f4531aa07 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 2.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03915 7a3881d7c82863604805916f4531aa07 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 2.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03915 7a3881d7c82863604805916f4531aa07 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03915 7a3881d7c82863604805916f4531aa07 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_03915 7a3881d7c82863604805916f4531aa07 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 241 5.9E-51 T 11-10-2018 ATC04_03915 7a3881d7c82863604805916f4531aa07 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_02475 443a70128b7eb9dac5d726f320e67072 327 Gene3D G3DSA:3.30.2010.10 121 209 5.0E-9 T 11-10-2018 ATC04_02475 443a70128b7eb9dac5d726f320e67072 327 Pfam PF01435 Peptidase family M48 148 224 5.8E-12 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ATC04_04295 dae9d53b50849e06ae427222799687fb 215 Pfam PF08239 Bacterial SH3 domain 88 137 1.5E-6 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_04295 dae9d53b50849e06ae427222799687fb 215 SMART SM00287 1 53 33.0 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_04295 dae9d53b50849e06ae427222799687fb 215 SMART SM00287 79 141 0.11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_04295 dae9d53b50849e06ae427222799687fb 215 SMART SM00287 153 215 0.24 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ATC04_04295 dae9d53b50849e06ae427222799687fb 215 Gene3D G3DSA:2.30.30.40 80 141 2.1E-10 T 11-10-2018 ATC04_04295 dae9d53b50849e06ae427222799687fb 215 Gene3D G3DSA:2.30.30.40 1 55 3.6E-6 T 11-10-2018 ATC04_04295 dae9d53b50849e06ae427222799687fb 215 Gene3D G3DSA:2.30.30.40 156 215 3.3E-5 T 11-10-2018 ATC04_04295 dae9d53b50849e06ae427222799687fb 215 Pfam PF06347 Bacterial SH3 domain 162 212 1.8E-7 T 11-10-2018 IPR010466 Protein of unknown function DUF1058 ATC04_01525 7d97c770f6250fc8e8b42364a820ae9f 433 Gene3D G3DSA:1.10.357.10 3 215 5.9E-30 T 11-10-2018 ATC04_01525 7d97c770f6250fc8e8b42364a820ae9f 433 SUPERFAMILY SSF46689 9 86 6.14E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_01525 7d97c770f6250fc8e8b42364a820ae9f 433 SUPERFAMILY SSF46689 234 296 1.61E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_01525 7d97c770f6250fc8e8b42364a820ae9f 433 Gene3D G3DSA:1.10.357.10 229 432 9.0E-21 T 11-10-2018 ATC04_01525 7d97c770f6250fc8e8b42364a820ae9f 433 Pfam PF00440 Bacterial regulatory proteins, tetR family 241 287 9.2E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01525 7d97c770f6250fc8e8b42364a820ae9f 433 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 1.3E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01525 7d97c770f6250fc8e8b42364a820ae9f 433 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 241 254 2.0E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_01525 7d97c770f6250fc8e8b42364a820ae9f 433 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 262 285 2.0E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_02900 108e35d64fa86ac16cee289b92b72bc7 425 Pfam PF07730 Histidine kinase 230 291 7.1E-16 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ATC04_02900 108e35d64fa86ac16cee289b92b72bc7 425 SUPERFAMILY SSF55874 306 422 3.19E-9 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_02900 108e35d64fa86ac16cee289b92b72bc7 425 Gene3D G3DSA:3.30.565.10 297 424 6.0E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_05890 c7c57e93af43b69af7dafb186e315201 94 Pfam PF13828 Domain of unknown function (DUF4190) 18 82 4.8E-10 T 11-10-2018 IPR025241 Domain of unknown function DUF4190 ATC04_12355 10f1d1b64e23b08515212f77adb75426 141 Pfam PF11188 Protein of unknown function (DUF2975) 18 136 1.8E-21 T 11-10-2018 IPR021354 Protein of unknown function DUF2975 ATC04_09430 c5c2ec4111f9e5d2cda64e24ca9b2bb9 257 Pfam PF04452 RNA methyltransferase 23 250 3.6E-54 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ATC04_09430 c5c2ec4111f9e5d2cda64e24ca9b2bb9 257 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 18 256 1.3E-33 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ATC04_09430 c5c2ec4111f9e5d2cda64e24ca9b2bb9 257 SUPERFAMILY SSF75217 77 255 5.18E-39 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ATC04_09430 c5c2ec4111f9e5d2cda64e24ca9b2bb9 257 PIRSF PIRSF015601 4 257 3.6E-47 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ATC04_09430 c5c2ec4111f9e5d2cda64e24ca9b2bb9 257 Gene3D G3DSA:3.40.1280.10 77 257 1.4E-52 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATC04_09430 c5c2ec4111f9e5d2cda64e24ca9b2bb9 257 SUPERFAMILY SSF88697 17 74 1.29E-10 T 11-10-2018 IPR015947 PUA-like superfamily ATC04_09430 c5c2ec4111f9e5d2cda64e24ca9b2bb9 257 Gene3D G3DSA:2.40.240.20 1 75 1.6E-18 T 11-10-2018 ATC04_17910 eb537320e605032f6bd525e16cb13e58 88 Gene3D G3DSA:3.30.2310.20 2 88 4.6E-33 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily ATC04_17910 eb537320e605032f6bd525e16cb13e58 88 SUPERFAMILY SSF143011 6 87 4.05E-22 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily ATC04_17910 eb537320e605032f6bd525e16cb13e58 88 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 8 88 7.7E-31 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 ATC04_17910 eb537320e605032f6bd525e16cb13e58 88 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 8 88 2.3E-36 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 ATC04_07930 4da4ed2924618492df3410f8e3747704 265 SUPERFAMILY SSF51366 8 253 1.18E-77 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ATC04_07930 4da4ed2924618492df3410f8e3747704 265 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 14 242 3.1E-69 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATC04_07930 4da4ed2924618492df3410f8e3747704 265 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 50 63 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATC04_07930 4da4ed2924618492df3410f8e3747704 265 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 16 259 31.853 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATC04_07930 4da4ed2924618492df3410f8e3747704 265 Gene3D G3DSA:3.20.20.70 3 265 1.3E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_07930 4da4ed2924618492df3410f8e3747704 265 Pfam PF00290 Tryptophan synthase alpha chain 11 243 7.1E-70 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATC04_10650 179ac6722f347a26eec6bb4eefeaa5c9 352 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 106 253 2.0E-40 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ATC04_10650 179ac6722f347a26eec6bb4eefeaa5c9 352 Gene3D G3DSA:1.10.260.150 60 350 7.2E-75 T 11-10-2018 ATC04_10650 179ac6722f347a26eec6bb4eefeaa5c9 352 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 105 254 9.9E-38 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ATC04_09780 cdcc0f4b8635e19d6b632752516d9c5b 392 Pfam PF00534 Glycosyl transferases group 1 205 354 4.3E-29 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ATC04_09780 cdcc0f4b8635e19d6b632752516d9c5b 392 Gene3D G3DSA:3.40.50.2000 186 367 1.8E-104 T 11-10-2018 ATC04_09780 cdcc0f4b8635e19d6b632752516d9c5b 392 Gene3D G3DSA:3.40.50.2000 1 383 1.8E-104 T 11-10-2018 ATC04_09780 cdcc0f4b8635e19d6b632752516d9c5b 392 Pfam PF13439 Glycosyltransferase Family 4 17 188 1.3E-27 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ATC04_09780 cdcc0f4b8635e19d6b632752516d9c5b 392 SUPERFAMILY SSF53756 16 383 6.28E-75 T 11-10-2018 ATC04_13530 ab4ba449d1d615eafded1d91e83a269c 269 Gene3D G3DSA:3.40.50.1110 5 194 5.0E-32 T 11-10-2018 IPR036514 SGNH hydrolase superfamily ATC04_13530 ab4ba449d1d615eafded1d91e83a269c 269 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 9 183 5.4E-26 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain ATC04_13530 ab4ba449d1d615eafded1d91e83a269c 269 SUPERFAMILY SSF52266 2 192 4.0E-41 T 11-10-2018 ATC04_15340 94522ddc382012d81b2607be9caa164b 556 Pfam PF06738 Putative threonine/serine exporter 144 384 3.3E-50 T 11-10-2018 IPR010619 Putative threonine/serine exporter ATC04_15340 94522ddc382012d81b2607be9caa164b 556 Pfam PF12821 Threonine/Serine exporter, ThrE 409 536 1.6E-12 T 11-10-2018 IPR024528 Threonine/Serine exporter, ThrE ATC04_09515 5aa1a3cbc611a2f430588eedcfc2bea3 133 PIRSF PIRSF017385 1 133 3.9E-47 T 11-10-2018 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 ATC04_09515 5aa1a3cbc611a2f430588eedcfc2bea3 133 Pfam PF12270 Cytochrome c oxidase subunit IV 1 132 2.0E-54 T 11-10-2018 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 ATC04_12170 688a8aeb2bb9edb44631266cce0ed3c6 82 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 76 17.856 T 11-10-2018 IPR003482 Transcription factor WhiB ATC04_12170 688a8aeb2bb9edb44631266cce0ed3c6 82 Pfam PF02467 Transcription factor WhiB 3 71 4.4E-26 T 11-10-2018 IPR034768 WhiB-like iron-sulfur binding domain ATC04_11350 a1a2249e3cea1fb7f21247261f7fd929 137 Pfam PF02561 Flagellar protein FliS 13 120 1.8E-25 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 ATC04_11350 a1a2249e3cea1fb7f21247261f7fd929 137 SUPERFAMILY SSF101116 14 122 2.22E-23 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 ATC04_11350 a1a2249e3cea1fb7f21247261f7fd929 137 TIGRFAM TIGR00208 fliS: flagellar protein FliS 11 123 2.5E-16 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 ATC04_11350 a1a2249e3cea1fb7f21247261f7fd929 137 Gene3D G3DSA:1.20.120.340 1 123 6.0E-25 T 11-10-2018 ATC04_07660 61e5c02f2106a0b255e4dee946dc9e63 633 SUPERFAMILY SSF56300 69 311 7.88E-12 T 11-10-2018 ATC04_16715 7c1493df39a1e4d240d643c810074d01 133 Pfam PF01475 Ferric uptake regulator family 5 119 9.9E-21 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ATC04_16715 7c1493df39a1e4d240d643c810074d01 133 SUPERFAMILY SSF46785 2 127 9.98E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_16715 7c1493df39a1e4d240d643c810074d01 133 Gene3D G3DSA:1.10.10.10 1 75 2.1E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_16715 7c1493df39a1e4d240d643c810074d01 133 Gene3D G3DSA:3.30.1490.190 77 133 2.0E-13 T 11-10-2018 ATC04_02250 4e029e8288ab3c14fd57af5c0e08ff90 255 PIRSF PIRSF003073 1 252 1.8E-59 T 11-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ATC04_02250 4e029e8288ab3c14fd57af5c0e08ff90 255 Gene3D G3DSA:3.40.50.300 67 250 7.0E-28 T 11-10-2018 ATC04_02250 4e029e8288ab3c14fd57af5c0e08ff90 255 Pfam PF01695 IstB-like ATP binding protein 55 229 2.0E-34 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 ATC04_02250 4e029e8288ab3c14fd57af5c0e08ff90 255 SUPERFAMILY SSF52540 88 225 1.14E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_00430 8f65cf691214aa3ce080a6675f9179d8 265 SUPERFAMILY SSF55781 73 249 3.01E-31 T 11-10-2018 ATC04_00430 8f65cf691214aa3ce080a6675f9179d8 265 Pfam PF09339 IclR helix-turn-helix domain 11 60 3.3E-12 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_00430 8f65cf691214aa3ce080a6675f9179d8 265 Gene3D G3DSA:3.30.450.40 84 257 3.3E-33 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_00430 8f65cf691214aa3ce080a6675f9179d8 265 Pfam PF01614 Bacterial transcriptional regulator 130 224 7.3E-15 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ATC04_00430 8f65cf691214aa3ce080a6675f9179d8 265 Gene3D G3DSA:1.10.10.10 9 80 1.9E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_00430 8f65cf691214aa3ce080a6675f9179d8 265 SMART SM00346 8 97 1.1E-13 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATC04_00430 8f65cf691214aa3ce080a6675f9179d8 265 SUPERFAMILY SSF46785 10 77 1.22E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_04570 8c8cb996c6405880149c6e6fc473c7e5 476 Gene3D G3DSA:1.20.1740.10 1 468 1.4E-26 T 11-10-2018 ATC04_04570 8c8cb996c6405880149c6e6fc473c7e5 476 PIRSF PIRSF006060 1 474 9.1E-48 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_04570 8c8cb996c6405880149c6e6fc473c7e5 476 Pfam PF13520 Amino acid permease 16 426 4.8E-20 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_08250 07f5dd9fdfb88e31a557ff2a0dfa3154 524 Gene3D G3DSA:3.40.50.10490 322 375 3.6E-9 T 11-10-2018 ATC04_08250 07f5dd9fdfb88e31a557ff2a0dfa3154 524 SUPERFAMILY SSF53697 25 370 3.97E-68 T 11-10-2018 ATC04_08250 07f5dd9fdfb88e31a557ff2a0dfa3154 524 Gene3D G3DSA:3.40.50.10490 209 288 5.3E-7 T 11-10-2018 ATC04_08250 07f5dd9fdfb88e31a557ff2a0dfa3154 524 Pfam PF00342 Phosphoglucose isomerase 78 275 1.6E-6 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08250 07f5dd9fdfb88e31a557ff2a0dfa3154 524 Gene3D G3DSA:3.40.50.10490 45 208 4.3E-32 T 11-10-2018 ATC04_08250 07f5dd9fdfb88e31a557ff2a0dfa3154 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 183 201 7.8E-7 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08250 07f5dd9fdfb88e31a557ff2a0dfa3154 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 254 275 7.8E-7 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_08250 07f5dd9fdfb88e31a557ff2a0dfa3154 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 82 101 7.8E-7 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATC04_01950 2ca725d714f9ac78289cdf14878e06de 176 PIRSF PIRSF024492 2 176 2.7E-51 T 11-10-2018 IPR014519 Uncharacterised conserved protein UCP024492 ATC04_01950 2ca725d714f9ac78289cdf14878e06de 176 Pfam PF04343 Protein of unknown function, DUF488 15 140 1.3E-23 T 11-10-2018 IPR007438 Protein of unknown function DUF488 ATC04_08665 d9c77cbc12ebcab3aea03b96bb5b9223 423 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 11 422 39.911 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ATC04_08665 d9c77cbc12ebcab3aea03b96bb5b9223 423 Gene3D G3DSA:3.40.605.10 24 417 5.3E-156 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ATC04_08665 d9c77cbc12ebcab3aea03b96bb5b9223 423 Pfam PF00171 Aldehyde dehydrogenase family 8 288 3.8E-9 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ATC04_08665 d9c77cbc12ebcab3aea03b96bb5b9223 423 PIRSF PIRSF000151 4 423 3.4E-168 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 ATC04_08665 d9c77cbc12ebcab3aea03b96bb5b9223 423 SUPERFAMILY SSF53720 10 422 1.57E-107 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ATC04_08665 d9c77cbc12ebcab3aea03b96bb5b9223 423 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 19 412 4.6E-142 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ATC04_08665 d9c77cbc12ebcab3aea03b96bb5b9223 423 Gene3D G3DSA:3.40.309.10 232 380 5.3E-156 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ATC04_08665 d9c77cbc12ebcab3aea03b96bb5b9223 423 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 329 351 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ATC04_03260 f5536954fb34e9be1adf4c933cd8daa0 685 SUPERFAMILY SSF82171 22 382 1.44E-23 T 11-10-2018 ATC04_03260 f5536954fb34e9be1adf4c933cd8daa0 685 SUPERFAMILY SSF53474 424 671 4.88E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_03260 f5536954fb34e9be1adf4c933cd8daa0 685 Gene3D G3DSA:2.120.10.30 12 170 4.1E-11 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ATC04_03260 f5536954fb34e9be1adf4c933cd8daa0 685 Gene3D G3DSA:2.120.10.30 214 390 3.9E-13 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ATC04_03260 f5536954fb34e9be1adf4c933cd8daa0 685 Pfam PF00326 Prolyl oligopeptidase family 463 671 1.2E-42 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATC04_03260 f5536954fb34e9be1adf4c933cd8daa0 685 Gene3D G3DSA:3.40.50.1820 417 672 1.5E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_02570 68f3b618bd561bec41c45c4af33c92f2 295 SUPERFAMILY SSF54637 9 153 7.46E-27 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_02570 68f3b618bd561bec41c45c4af33c92f2 295 Gene3D G3DSA:3.10.129.10 12 290 3.2E-68 T 11-10-2018 ATC04_02570 68f3b618bd561bec41c45c4af33c92f2 295 Pfam PF01575 MaoC like domain 161 263 4.7E-23 T 11-10-2018 IPR002539 MaoC-like dehydratase domain ATC04_02570 68f3b618bd561bec41c45c4af33c92f2 295 Pfam PF13452 N-terminal half of MaoC dehydratase 55 135 5.7E-9 T 11-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 ATC04_02570 68f3b618bd561bec41c45c4af33c92f2 295 SUPERFAMILY SSF54637 161 272 2.17E-23 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_08335 6bcbca39438deaf98c50b250629d6fbe 192 PIRSF PIRSF016661 1 192 1.7E-43 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 ATC04_08335 6bcbca39438deaf98c50b250629d6fbe 192 Pfam PF02632 BioY family 37 184 2.6E-35 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 ATC04_08335 6bcbca39438deaf98c50b250629d6fbe 192 Gene3D G3DSA:1.10.1760.20 1 189 1.7E-53 T 11-10-2018 ATC04_09215 6062c4391c7db3dbee495e34643953a8 478 Pfam PF02618 YceG-like family 175 464 6.0E-58 T 11-10-2018 IPR003770 Endolytic murein transglycosylase ATC04_09215 6062c4391c7db3dbee495e34643953a8 478 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 136 468 25.184 T 11-10-2018 IPR003770 Endolytic murein transglycosylase ATC04_09215 6062c4391c7db3dbee495e34643953a8 478 Gene3D G3DSA:1.10.8.1150 170 243 4.3E-6 T 11-10-2018 ATC04_09215 6062c4391c7db3dbee495e34643953a8 478 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 133 466 3.8E-39 T 11-10-2018 IPR003770 Endolytic murein transglycosylase ATC04_11255 ec3be601527bf7923b74f27415907ad7 172 Pfam PF04347 Flagellar biosynthesis protein, FliO 24 138 4.9E-12 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 ATC04_01970 b93f3ac7e7d9f8c519ca51ea2278be0d 365 Pfam PF00487 Fatty acid desaturase 66 328 1.7E-36 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 ATC04_01970 b93f3ac7e7d9f8c519ca51ea2278be0d 365 PIRSF PIRSF015921 20 353 1.4E-65 T 11-10-2018 IPR012171 Fatty acid desaturase GO:0006629|GO:0016021|GO:0016491 ATC04_17040 ccf11fc49f8812f60daa27baec1fc1a6 192 Gene3D G3DSA:3.40.50.2020 5 192 3.2E-43 T 11-10-2018 ATC04_17040 ccf11fc49f8812f60daa27baec1fc1a6 192 SUPERFAMILY SSF53271 16 188 2.36E-31 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ATC04_17040 ccf11fc49f8812f60daa27baec1fc1a6 192 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 192 22.811 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ATC04_17040 ccf11fc49f8812f60daa27baec1fc1a6 192 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 22 182 1.3E-36 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ATC04_17040 ccf11fc49f8812f60daa27baec1fc1a6 192 Pfam PF00156 Phosphoribosyl transferase domain 55 172 1.8E-8 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ATC04_11520 cd883ac448e979701942e08c06337947 118 Gene3D G3DSA:2.40.128.270 6 117 8.7E-13 T 11-10-2018 IPR038670 HslJ-like superfamily ATC04_11520 cd883ac448e979701942e08c06337947 118 Pfam PF03724 META domain 34 113 1.8E-13 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ ATC04_07770 053c3af05e35f70053dabdae744080cf 146 SUPERFAMILY SSF82649 4 142 2.35E-29 T 11-10-2018 ATC04_07770 053c3af05e35f70053dabdae744080cf 146 Gene3D G3DSA:3.90.1010.10 3 146 4.7E-49 T 11-10-2018 ATC04_07770 053c3af05e35f70053dabdae744080cf 146 Pfam PF02657 Fe-S metabolism associated domain 13 139 4.2E-28 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like ATC04_01210 6e3ef03041fa01a64da54febb41e98da 309 Gene3D G3DSA:3.10.180.10 2 131 8.2E-34 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_01210 6e3ef03041fa01a64da54febb41e98da 309 SUPERFAMILY SSF54593 1 272 4.5E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_01210 6e3ef03041fa01a64da54febb41e98da 309 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 143 263 2.5E-24 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_01210 6e3ef03041fa01a64da54febb41e98da 309 Gene3D G3DSA:3.10.180.10 133 296 9.3E-50 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_01210 6e3ef03041fa01a64da54febb41e98da 309 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 241 262 - T 11-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 ATC04_13435 7513a2646c5b35986d62ddd53c207524 254 Gene3D G3DSA:3.40.50.300 1 230 1.1E-63 T 11-10-2018 ATC04_13435 7513a2646c5b35986d62ddd53c207524 254 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_13435 7513a2646c5b35986d62ddd53c207524 254 SMART SM00382 28 209 2.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_13435 7513a2646c5b35986d62ddd53c207524 254 SUPERFAMILY SSF52540 3 222 4.7E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13435 7513a2646c5b35986d62ddd53c207524 254 Pfam PF00005 ABC transporter 19 160 1.0E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_13340 33af6ff04f3fdc270c46ebe7536b333c 287 Pfam PF01148 Cytidylyltransferase family 27 278 2.3E-56 T 11-10-2018 ATC04_13340 33af6ff04f3fdc270c46ebe7536b333c 287 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 ATC04_04095 3d1e3559576e03d3da6ee3004de7338e 911 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 575 758 8.5E-21 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 ATC04_04095 3d1e3559576e03d3da6ee3004de7338e 911 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 296 521 6.2E-50 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 ATC04_04095 3d1e3559576e03d3da6ee3004de7338e 911 SUPERFAMILY SSF53383 296 774 3.53E-69 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_04095 3d1e3559576e03d3da6ee3004de7338e 911 Gene3D G3DSA:3.90.105.10 845 892 3.7E-8 T 11-10-2018 ATC04_04095 3d1e3559576e03d3da6ee3004de7338e 911 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 849 884 1.6E-4 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 ATC04_16400 8b77ee05a72bbe46bfb58d13cce18280 209 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 102 187 4.1E-13 T 11-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain ATC04_16400 8b77ee05a72bbe46bfb58d13cce18280 209 Gene3D G3DSA:3.30.70.2390 99 157 4.9E-6 T 11-10-2018 ATC04_06460 bd3d643955a321d07b406fbebf3423d7 221 Pfam PF08666 SAF domain 49 105 4.4E-9 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 ATC04_06460 bd3d643955a321d07b406fbebf3423d7 221 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 119 219 4.2E-9 T 11-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain ATC04_06460 bd3d643955a321d07b406fbebf3423d7 221 SMART SM00858 48 110 5.4E-9 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 ATC04_02750 7df03d2af93c94bb7649916d1a307fd4 323 SUPERFAMILY SSF103481 232 316 6.02E-10 T 11-10-2018 ATC04_02750 7df03d2af93c94bb7649916d1a307fd4 323 SUPERFAMILY SSF103481 70 159 1.2E-13 T 11-10-2018 ATC04_02750 7df03d2af93c94bb7649916d1a307fd4 323 Pfam PF00892 EamA-like transporter family 171 314 2.5E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ATC04_02750 7df03d2af93c94bb7649916d1a307fd4 323 Pfam PF00892 EamA-like transporter family 25 159 2.2E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ATC04_03625 68caae7e35d90b7c4b7993cfdab51647 185 Gene3D G3DSA:2.40.128.110 13 182 3.8E-53 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ATC04_03625 68caae7e35d90b7c4b7993cfdab51647 185 SUPERFAMILY SSF101874 12 180 1.1E-54 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ATC04_03625 68caae7e35d90b7c4b7993cfdab51647 185 SMART SM00867 13 180 7.7E-69 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATC04_03625 68caae7e35d90b7c4b7993cfdab51647 185 Pfam PF04264 YceI-like domain 14 179 1.4E-46 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATC04_03785 38a92c5409ee4e8a2830fe6cb94d001c 66 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 3 52 9.6E-11 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 ATC04_03785 38a92c5409ee4e8a2830fe6cb94d001c 66 Pfam PF12728 Helix-turn-helix domain 3 54 2.7E-12 T 11-10-2018 ATC04_03785 38a92c5409ee4e8a2830fe6cb94d001c 66 Gene3D G3DSA:1.10.1660.10 2 53 3.4E-9 T 11-10-2018 ATC04_03785 38a92c5409ee4e8a2830fe6cb94d001c 66 SUPERFAMILY SSF46955 2 59 1.65E-7 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_14615 b782bbc093ec0580bc36eb431dec4e84 172 Gene3D G3DSA:2.160.10.10 3 170 1.9E-56 T 11-10-2018 ATC04_14615 b782bbc093ec0580bc36eb431dec4e84 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 89 122 1.6E-6 T 11-10-2018 IPR001451 Hexapeptide repeat ATC04_14615 b782bbc093ec0580bc36eb431dec4e84 172 SUPERFAMILY SSF51161 2 165 3.33E-45 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ATC04_08170 2878297a3f0a11e22a8babbc88394d14 228 Gene3D G3DSA:1.10.150.240 12 78 5.4E-50 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ATC04_08170 2878297a3f0a11e22a8babbc88394d14 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 181 2.0E-23 T 11-10-2018 ATC04_08170 2878297a3f0a11e22a8babbc88394d14 228 Gene3D G3DSA:3.40.50.1000 1 196 5.4E-50 T 11-10-2018 IPR023214 HAD superfamily ATC04_08170 2878297a3f0a11e22a8babbc88394d14 228 SUPERFAMILY SSF56784 1 209 2.67E-45 T 11-10-2018 IPR036412 HAD-like superfamily ATC04_04535 34e4fdcb4f2e4c4990ed53a8e06bfb53 372 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 117 305 9.4E-8 T 11-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 ATC04_04535 34e4fdcb4f2e4c4990ed53a8e06bfb53 372 Gene3D G3DSA:3.40.50.12580 196 305 2.3E-6 T 11-10-2018 ATC04_04535 34e4fdcb4f2e4c4990ed53a8e06bfb53 372 Gene3D G3DSA:3.40.50.11820 144 195 2.3E-6 T 11-10-2018 ATC04_00380 f9272b1a85524c228348d28b9bb77a90 264 PIRSF PIRSF000513 5 261 2.2E-81 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_00380 f9272b1a85524c228348d28b9bb77a90 264 SUPERFAMILY SSF53613 10 249 5.77E-59 T 11-10-2018 IPR029056 Ribokinase-like ATC04_00380 f9272b1a85524c228348d28b9bb77a90 264 Gene3D G3DSA:3.40.1190.20 2 259 1.6E-85 T 11-10-2018 IPR029056 Ribokinase-like ATC04_00380 f9272b1a85524c228348d28b9bb77a90 264 Pfam PF02110 Hydroxyethylthiazole kinase family 10 248 7.0E-73 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_00380 f9272b1a85524c228348d28b9bb77a90 264 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 9 254 28.871 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_00380 f9272b1a85524c228348d28b9bb77a90 264 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 159 176 3.0E-32 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_00380 f9272b1a85524c228348d28b9bb77a90 264 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 85 102 3.0E-32 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_00380 f9272b1a85524c228348d28b9bb77a90 264 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 28 49 3.0E-32 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_00380 f9272b1a85524c228348d28b9bb77a90 264 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 115 129 3.0E-32 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_00380 f9272b1a85524c228348d28b9bb77a90 264 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 59 67 3.0E-32 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_00380 f9272b1a85524c228348d28b9bb77a90 264 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 15 22 3.0E-32 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATC04_02875 e471d55b6482162460cd478a6dc440aa 338 PIRSF PIRSF029792 1 338 3.6E-90 T 11-10-2018 IPR008794 Proline racemase family ATC04_02875 e471d55b6482162460cd478a6dc440aa 338 Gene3D G3DSA:3.10.310.10 149 314 1.6E-106 T 11-10-2018 ATC04_02875 e471d55b6482162460cd478a6dc440aa 338 Gene3D G3DSA:3.10.310.10 9 337 1.6E-106 T 11-10-2018 ATC04_02875 e471d55b6482162460cd478a6dc440aa 338 Pfam PF05544 Proline racemase 9 335 1.1E-80 T 11-10-2018 IPR008794 Proline racemase family ATC04_02875 e471d55b6482162460cd478a6dc440aa 338 SUPERFAMILY SSF54506 6 335 4.29E-84 T 11-10-2018 ATC04_01745 86673624fd0b22cb0f378a052ad7a058 203 TIGRFAM TIGR01375 soxG: sarcosine oxidase, gamma subunit family 46 196 2.6E-59 T 11-10-2018 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 ATC04_01745 86673624fd0b22cb0f378a052ad7a058 203 Gene3D G3DSA:3.30.70.1520 40 119 7.3E-66 T 11-10-2018 ATC04_01745 86673624fd0b22cb0f378a052ad7a058 203 Pfam PF04268 Sarcosine oxidase, gamma subunit family 54 195 9.5E-29 T 11-10-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 ATC04_01745 86673624fd0b22cb0f378a052ad7a058 203 Gene3D G3DSA:3.30.1360.120 33 197 7.3E-66 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ATC04_01745 86673624fd0b22cb0f378a052ad7a058 203 SUPERFAMILY SSF103025 77 198 1.63E-16 T 11-10-2018 ATC04_04370 471c57da9a6d8ddeb3464330997299ce 335 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 10 196 3.1E-37 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATC04_04370 471c57da9a6d8ddeb3464330997299ce 335 Gene3D G3DSA:3.10.310.10 4 131 4.4E-40 T 11-10-2018 ATC04_04370 471c57da9a6d8ddeb3464330997299ce 335 SUPERFAMILY SSF54506 8 332 4.19E-63 T 11-10-2018 ATC04_04370 471c57da9a6d8ddeb3464330997299ce 335 PIRSF PIRSF016184 229 334 2.1E-16 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATC04_04370 471c57da9a6d8ddeb3464330997299ce 335 PIRSF PIRSF016184 5 217 4.0E-47 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATC04_04370 471c57da9a6d8ddeb3464330997299ce 335 Pfam PF02567 Phenazine biosynthesis-like protein 252 326 8.7E-11 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATC04_04370 471c57da9a6d8ddeb3464330997299ce 335 Pfam PF02567 Phenazine biosynthesis-like protein 13 218 8.6E-37 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATC04_18475 43827e08463d1f5368a070a7b2ea64f5 189 SUPERFAMILY SSF46689 142 183 3.7E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_18475 43827e08463d1f5368a070a7b2ea64f5 189 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_18475 43827e08463d1f5368a070a7b2ea64f5 189 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ATC04_18475 43827e08463d1f5368a070a7b2ea64f5 189 Gene3D G3DSA:3.40.50.1390 4 128 1.0E-32 T 11-10-2018 ATC04_18475 43827e08463d1f5368a070a7b2ea64f5 189 Pfam PF00239 Resolvase, N terminal domain 5 139 6.5E-35 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_18475 43827e08463d1f5368a070a7b2ea64f5 189 SMART SM00857 4 140 1.3E-41 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ATC04_18475 43827e08463d1f5368a070a7b2ea64f5 189 SUPERFAMILY SSF53041 4 140 2.22E-32 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ATC04_07030 323d160246f328c10283c810d2fd5c19 1014 Pfam PF03699 Uncharacterised protein family (UPF0182) 34 835 2.2E-277 T 11-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 ATC04_07030 323d160246f328c10283c810d2fd5c19 1014 Hamap MF_01600 UPF0182 protein . 23 911 18.566 T 11-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 ATC04_12570 074879f37f21c48352ed056d887fcde8 64 Gene3D G3DSA:2.40.50.530 1 63 3.4E-25 T 11-10-2018 ATC04_12570 074879f37f21c48352ed056d887fcde8 64 SUPERFAMILY SSF143034 2 63 3.4E-23 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_12570 074879f37f21c48352ed056d887fcde8 64 Pfam PF01632 Ribosomal protein L35 2 62 3.8E-25 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_12570 074879f37f21c48352ed056d887fcde8 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.5E-16 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ATC04_12570 074879f37f21c48352ed056d887fcde8 64 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.5E-16 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ATC04_12570 074879f37f21c48352ed056d887fcde8 64 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.5E-16 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ATC04_12570 074879f37f21c48352ed056d887fcde8 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 5.5E-25 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ATC04_12570 074879f37f21c48352ed056d887fcde8 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.787 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ATC04_12570 074879f37f21c48352ed056d887fcde8 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_04940 a2c372ff39a5af96bf5117bf8ad288fa 719 SUPERFAMILY SSF82866 493 704 2.35E-29 T 11-10-2018 ATC04_04940 a2c372ff39a5af96bf5117bf8ad288fa 719 Pfam PF03176 MMPL family 423 707 9.5E-52 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ATC04_04940 a2c372ff39a5af96bf5117bf8ad288fa 719 Pfam PF03176 MMPL family 106 381 6.5E-56 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ATC04_04940 a2c372ff39a5af96bf5117bf8ad288fa 719 Gene3D G3DSA:1.20.1640.10 539 692 2.7E-7 T 11-10-2018 ATC04_04940 a2c372ff39a5af96bf5117bf8ad288fa 719 Gene3D G3DSA:3.30.70.1440 486 538 2.7E-7 T 11-10-2018 ATC04_04940 a2c372ff39a5af96bf5117bf8ad288fa 719 SUPERFAMILY SSF82866 144 347 1.7E-30 T 11-10-2018 ATC04_04940 a2c372ff39a5af96bf5117bf8ad288fa 719 Gene3D G3DSA:1.20.1640.10 166 362 5.8E-14 T 11-10-2018 ATC04_13200 dd42e0e5f94d62089ae33f63e0f687af 99 SUPERFAMILY SSF54909 1 90 2.06E-15 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_13200 dd42e0e5f94d62089ae33f63e0f687af 99 Gene3D G3DSA:3.30.70.1060 2 92 3.0E-10 T 11-10-2018 ATC04_13200 dd42e0e5f94d62089ae33f63e0f687af 99 Pfam PF03795 YCII-related domain 4 88 5.1E-10 T 11-10-2018 IPR005545 YCII-related ATC04_10415 faf2e8054bea14a4521fbcd4d3bc6771 299 Pfam PF03239 Iron permease FTR1 family 1 252 8.7E-50 T 11-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 ATC04_18025 9a38615f6214d23fac135758135333be 130 Pfam PF05713 Bacterial mobilisation protein (MobC) 78 118 2.9E-9 T 11-10-2018 IPR008687 Bacterial mobilisation ATC04_05160 8eb7f5100e3407ab1e039a1f1fe93b8f 182 Pfam PF00482 Type II secretion system (T2SS), protein F 56 168 4.7E-6 T 11-10-2018 IPR018076 Type II secretion system F domain ATC04_10480 6b3beab67b64ea67f19277f21bbc9b77 406 SUPERFAMILY SSF111352 7 382 3.92E-101 T 11-10-2018 ATC04_10480 6b3beab67b64ea67f19277f21bbc9b77 406 PRINTS PR00342 Rhesus blood group protein signature 261 274 2.7E-5 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ATC04_10480 6b3beab67b64ea67f19277f21bbc9b77 406 PRINTS PR00342 Rhesus blood group protein signature 96 112 2.7E-5 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ATC04_10480 6b3beab67b64ea67f19277f21bbc9b77 406 PRINTS PR00342 Rhesus blood group protein signature 198 216 2.7E-5 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ATC04_10480 6b3beab67b64ea67f19277f21bbc9b77 406 PRINTS PR00342 Rhesus blood group protein signature 358 383 2.7E-5 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ATC04_10480 6b3beab67b64ea67f19277f21bbc9b77 406 Pfam PF00909 Ammonium Transporter Family 8 401 1.2E-108 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 ATC04_10480 6b3beab67b64ea67f19277f21bbc9b77 406 TIGRFAM TIGR00836 amt: ammonium transporter 8 401 4.0E-113 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 ATC04_10480 6b3beab67b64ea67f19277f21bbc9b77 406 Gene3D G3DSA:1.10.3430.10 4 406 4.9E-118 T 11-10-2018 IPR029020 Ammonium/urea transporter ATC04_10250 6de0300272239240d20c46907830767b 64 Pfam PF05532 CsbD-like 5 56 1.7E-17 T 11-10-2018 IPR008462 CsbD-like domain ATC04_10250 6de0300272239240d20c46907830767b 64 SUPERFAMILY SSF69047 5 63 7.06E-11 T 11-10-2018 IPR036629 YjbJ superfamily ATC04_10250 6de0300272239240d20c46907830767b 64 Gene3D G3DSA:1.10.1470.10 4 64 3.5E-7 T 11-10-2018 IPR036629 YjbJ superfamily ATC04_04870 2b88b132bc44ef572a4e2b8e34eb7fcc 533 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 168 192 7.5E-10 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_04870 2b88b132bc44ef572a4e2b8e34eb7fcc 533 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 377 403 7.5E-10 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_04870 2b88b132bc44ef572a4e2b8e34eb7fcc 533 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 7.5E-10 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_04870 2b88b132bc44ef572a4e2b8e34eb7fcc 533 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 325 344 7.5E-10 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_04870 2b88b132bc44ef572a4e2b8e34eb7fcc 533 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 138 157 7.5E-10 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_04870 2b88b132bc44ef572a4e2b8e34eb7fcc 533 Pfam PF00361 Proton-conducting membrane transporter 132 419 2.6E-61 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATC04_13845 2c7e66d49301dc4fb4be0b03c23f4437 285 SUPERFAMILY SSF51735 15 255 4.0E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_13845 2c7e66d49301dc4fb4be0b03c23f4437 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 195 1.1E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_13845 2c7e66d49301dc4fb4be0b03c23f4437 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 1.1E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_13845 2c7e66d49301dc4fb4be0b03c23f4437 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 1.1E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_13845 2c7e66d49301dc4fb4be0b03c23f4437 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 214 1.1E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_13845 2c7e66d49301dc4fb4be0b03c23f4437 285 Pfam PF00106 short chain dehydrogenase 20 213 4.0E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_13845 2c7e66d49301dc4fb4be0b03c23f4437 285 Gene3D G3DSA:3.40.50.720 10 285 3.3E-66 T 11-10-2018 ATC04_09155 c4669dae6ebfa95cfb2c4a3438c8e109 452 Pfam PF03993 Domain of Unknown Function (DUF349) 289 361 1.5E-18 T 11-10-2018 IPR007139 Protein of unknown function DUF349 ATC04_09155 c4669dae6ebfa95cfb2c4a3438c8e109 452 Pfam PF03993 Domain of Unknown Function (DUF349) 129 200 4.9E-7 T 11-10-2018 IPR007139 Protein of unknown function DUF349 ATC04_09155 c4669dae6ebfa95cfb2c4a3438c8e109 452 Pfam PF03993 Domain of Unknown Function (DUF349) 212 285 5.8E-18 T 11-10-2018 IPR007139 Protein of unknown function DUF349 ATC04_03690 e3687945cbf68ddc0cab417e89a6e005 304 SUPERFAMILY SSF53067 107 289 8.91E-33 T 11-10-2018 ATC04_03690 e3687945cbf68ddc0cab417e89a6e005 304 Gene3D G3DSA:3.30.420.40 106 266 4.5E-43 T 11-10-2018 ATC04_03690 e3687945cbf68ddc0cab417e89a6e005 304 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 43 268 2.0E-17 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 ATC04_03690 e3687945cbf68ddc0cab417e89a6e005 304 Gene3D G3DSA:3.30.420.40 6 105 4.5E-43 T 11-10-2018 ATC04_01760 9d6064dfd7adb26d783b9804cd451f90 138 Pfam PF08818 Domain of unknown function (DU1801) 27 130 6.3E-8 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 PRINTS PR00691 Adhesin B signature 178 195 3.6E-31 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 PRINTS PR00691 Adhesin B signature 49 67 3.6E-31 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 PRINTS PR00691 Adhesin B signature 227 244 3.6E-31 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 PRINTS PR00691 Adhesin B signature 68 87 3.6E-31 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 PRINTS PR00691 Adhesin B signature 249 267 3.6E-31 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 PRINTS PR00691 Adhesin B signature 24 45 3.6E-31 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 PRINTS PR00691 Adhesin B signature 204 222 3.6E-31 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 Pfam PF01297 Zinc-uptake complex component A periplasmic 27 290 8.4E-71 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 Gene3D G3DSA:3.40.50.1980 180 295 7.0E-40 T 11-10-2018 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 SUPERFAMILY SSF53807 22 294 1.32E-82 T 11-10-2018 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 PRINTS PR00690 Adhesin family signature 231 249 2.1E-37 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 PRINTS PR00690 Adhesin family signature 257 276 2.1E-37 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 PRINTS PR00690 Adhesin family signature 24 42 2.1E-37 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 PRINTS PR00690 Adhesin family signature 55 68 2.1E-37 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 PRINTS PR00690 Adhesin family signature 178 199 2.1E-37 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 PRINTS PR00690 Adhesin family signature 68 85 2.1E-37 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ATC04_03815 44bec1b49311ca3c366ffad41239b0af 296 Gene3D G3DSA:3.40.50.1980 24 179 1.7E-48 T 11-10-2018 ATC04_10205 fd2de004c924098e83b5ae352f0f8a39 194 SUPERFAMILY SSF46689 3 68 3.39E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_10205 fd2de004c924098e83b5ae352f0f8a39 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 1.1E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_10205 fd2de004c924098e83b5ae352f0f8a39 194 Gene3D G3DSA:1.10.357.10 6 192 7.4E-25 T 11-10-2018 ATC04_15950 744d0bfa2b532a51689f10bf93a5ef55 266 Gene3D G3DSA:3.40.190.10 48 257 2.6E-58 T 11-10-2018 ATC04_15950 744d0bfa2b532a51689f10bf93a5ef55 266 Gene3D G3DSA:3.40.190.10 124 223 2.6E-58 T 11-10-2018 ATC04_15950 744d0bfa2b532a51689f10bf93a5ef55 266 SUPERFAMILY SSF53850 45 257 8.16E-47 T 11-10-2018 ATC04_15950 744d0bfa2b532a51689f10bf93a5ef55 266 PIRSF PIRSF004846 6 261 9.0E-58 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 ATC04_15950 744d0bfa2b532a51689f10bf93a5ef55 266 Pfam PF13531 Bacterial extracellular solute-binding protein 46 257 5.6E-35 T 11-10-2018 ATC04_15950 744d0bfa2b532a51689f10bf93a5ef55 266 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 51 256 2.6E-35 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 ATC04_13145 f39fcd6cdab6c0b03b0e2fbe7a4ff47a 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 210 4.5E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_13145 f39fcd6cdab6c0b03b0e2fbe7a4ff47a 224 SMART SM00448 2 120 5.3E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_13145 f39fcd6cdab6c0b03b0e2fbe7a4ff47a 224 Pfam PF00072 Response regulator receiver domain 4 120 9.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_13145 f39fcd6cdab6c0b03b0e2fbe7a4ff47a 224 SUPERFAMILY SSF46894 142 217 9.18E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_13145 f39fcd6cdab6c0b03b0e2fbe7a4ff47a 224 SMART SM00421 153 210 1.9E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_13145 f39fcd6cdab6c0b03b0e2fbe7a4ff47a 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 2.0E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_13145 f39fcd6cdab6c0b03b0e2fbe7a4ff47a 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 2.0E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_13145 f39fcd6cdab6c0b03b0e2fbe7a4ff47a 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 2.0E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_13145 f39fcd6cdab6c0b03b0e2fbe7a4ff47a 224 SUPERFAMILY SSF52172 2 133 3.13E-33 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_13145 f39fcd6cdab6c0b03b0e2fbe7a4ff47a 224 Gene3D G3DSA:3.40.50.12740 2 216 1.5E-67 T 11-10-2018 ATC04_13080 3c4faf33ca04215e7ea0a5f2106198ea 227 SMART SM00554 129 224 2.6E-29 T 11-10-2018 IPR000782 FAS1 domain ATC04_13080 3c4faf33ca04215e7ea0a5f2106198ea 227 SUPERFAMILY SSF82153 80 224 2.22E-34 T 11-10-2018 IPR036378 FAS1 domain superfamily ATC04_13080 3c4faf33ca04215e7ea0a5f2106198ea 227 Pfam PF02469 Fasciclin domain 104 223 7.4E-26 T 11-10-2018 IPR000782 FAS1 domain ATC04_13080 3c4faf33ca04215e7ea0a5f2106198ea 227 Gene3D G3DSA:2.30.180.10 63 225 3.3E-52 T 11-10-2018 IPR036378 FAS1 domain superfamily ATC04_03025 55e2ad37caf9ca778ddf47fc5609145a 438 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 82 438 65.849 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 ATC04_03025 55e2ad37caf9ca778ddf47fc5609145a 438 Gene3D G3DSA:1.10.150.530 83 141 3.3E-9 T 11-10-2018 ATC04_03025 55e2ad37caf9ca778ddf47fc5609145a 438 SUPERFAMILY SSF102114 183 411 3.79E-15 T 11-10-2018 ATC04_03025 55e2ad37caf9ca778ddf47fc5609145a 438 PIRSF PIRSF006004 17 80 42.0 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 ATC04_03025 55e2ad37caf9ca778ddf47fc5609145a 438 PIRSF PIRSF006004 77 438 1.2E-116 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 ATC04_03025 55e2ad37caf9ca778ddf47fc5609145a 438 Pfam PF04055 Radical SAM superfamily 187 363 4.8E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ATC04_03025 55e2ad37caf9ca778ddf47fc5609145a 438 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 84 434 1.7E-96 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 ATC04_03025 55e2ad37caf9ca778ddf47fc5609145a 438 Gene3D G3DSA:3.20.20.70 146 423 3.4E-91 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_05645 3c8d4800201fa88940a0f1c813a9b58b 63 Gene3D G3DSA:1.10.1660.10 5 57 9.8E-8 T 11-10-2018 ATC04_05645 3c8d4800201fa88940a0f1c813a9b58b 63 Pfam PF12728 Helix-turn-helix domain 9 55 2.1E-6 T 11-10-2018 ATC04_04655 1a39b82de604345f5d0e4710015add52 212 Gene3D G3DSA:1.10.357.10 12 203 8.3E-23 T 11-10-2018 ATC04_04655 1a39b82de604345f5d0e4710015add52 212 SUPERFAMILY SSF46689 12 85 3.92E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_04655 1a39b82de604345f5d0e4710015add52 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 6.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_04655 1a39b82de604345f5d0e4710015add52 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 6.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_04655 1a39b82de604345f5d0e4710015add52 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 1.8E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_14535 c6897ba46fae24d7e04e633e7717ee64 305 Gene3D G3DSA:1.10.10.10 1 83 3.1E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_14535 c6897ba46fae24d7e04e633e7717ee64 305 SUPERFAMILY SSF53850 91 303 5.31E-32 T 11-10-2018 ATC04_14535 c6897ba46fae24d7e04e633e7717ee64 305 Gene3D G3DSA:3.40.190.10 161 274 2.3E-42 T 11-10-2018 ATC04_14535 c6897ba46fae24d7e04e633e7717ee64 305 SUPERFAMILY SSF46785 2 112 6.22E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_14535 c6897ba46fae24d7e04e633e7717ee64 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.1E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATC04_14535 c6897ba46fae24d7e04e633e7717ee64 305 Pfam PF03466 LysR substrate binding domain 90 301 1.1E-34 T 11-10-2018 IPR005119 LysR, substrate-binding ATC04_14535 c6897ba46fae24d7e04e633e7717ee64 305 Gene3D G3DSA:3.40.190.10 93 297 2.3E-42 T 11-10-2018 ATC04_03310 c9ceb8ae7633644cd261941078c9c491 179 Gene3D G3DSA:3.40.50.1240 1 173 5.8E-40 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_03310 c9ceb8ae7633644cd261941078c9c491 179 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 1 152 2.5E-38 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_03310 c9ceb8ae7633644cd261941078c9c491 179 SMART SM00855 1 143 1.1E-17 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ATC04_03310 c9ceb8ae7633644cd261941078c9c491 179 SUPERFAMILY SSF53254 1 164 1.02E-39 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ATC04_03310 c9ceb8ae7633644cd261941078c9c491 179 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 1 10 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 ATC04_07065 e389a6665da87ff608619d2e5c209a3a 635 Pfam PF04536 TPM domain 2 106 6.8E-13 T 11-10-2018 IPR007621 TPM domain ATC04_07065 e389a6665da87ff608619d2e5c209a3a 635 Gene3D G3DSA:3.10.310.50 1 125 3.6E-20 T 11-10-2018 ATC04_09915 57139c179e9da3ffc7a61f8425c72edb 448 SUPERFAMILY SSF116734 226 415 2.13E-26 T 11-10-2018 ATC04_09915 57139c179e9da3ffc7a61f8425c72edb 448 Pfam PF01420 Type I restriction modification DNA specificity domain 252 392 2.6E-4 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 ATC04_09915 57139c179e9da3ffc7a61f8425c72edb 448 SUPERFAMILY SSF116734 16 210 8.99E-19 T 11-10-2018 ATC04_09915 57139c179e9da3ffc7a61f8425c72edb 448 Gene3D G3DSA:3.90.220.20 16 211 1.6E-17 T 11-10-2018 ATC04_09915 57139c179e9da3ffc7a61f8425c72edb 448 Gene3D G3DSA:3.90.220.20 220 410 2.3E-21 T 11-10-2018 ATC04_15925 da5aeed57fe2d1792c54274d9bdf125b 483 Pfam PF02720 Domain of unknown function (DUF222) 66 310 7.3E-8 T 11-10-2018 IPR003870 Domain of unknown function DUF222 ATC04_15925 da5aeed57fe2d1792c54274d9bdf125b 483 Gene3D G3DSA:3.30.40.60 347 435 3.9E-6 T 11-10-2018 ATC04_04300 d5041a4c375e4f98e3d3eb9560c15eba 221 Gene3D G3DSA:3.40.50.12740 4 213 6.7E-39 T 11-10-2018 ATC04_04300 d5041a4c375e4f98e3d3eb9560c15eba 221 SUPERFAMILY SSF52172 4 130 1.71E-14 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_04300 d5041a4c375e4f98e3d3eb9560c15eba 221 SMART SM00421 150 207 2.1E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_04300 d5041a4c375e4f98e3d3eb9560c15eba 221 SUPERFAMILY SSF46894 140 213 4.42E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATC04_04300 d5041a4c375e4f98e3d3eb9560c15eba 221 SMART SM00448 4 117 0.0021 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_04300 d5041a4c375e4f98e3d3eb9560c15eba 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 2.9E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_04300 d5041a4c375e4f98e3d3eb9560c15eba 221 Pfam PF00072 Response regulator receiver domain 6 117 1.8E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_04300 d5041a4c375e4f98e3d3eb9560c15eba 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.8E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_04300 d5041a4c375e4f98e3d3eb9560c15eba 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.8E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_04300 d5041a4c375e4f98e3d3eb9560c15eba 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.8E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATC04_14060 69714183e77e0935e117041d73cfc11a 374 Pfam PF08713 DNA alkylation repair enzyme 120 237 8.2E-6 T 11-10-2018 IPR014825 DNA alkylation repair enzyme ATC04_14060 69714183e77e0935e117041d73cfc11a 374 SUPERFAMILY SSF48371 37 240 1.73E-33 T 11-10-2018 IPR016024 Armadillo-type fold ATC04_14060 69714183e77e0935e117041d73cfc11a 374 Gene3D G3DSA:1.25.40.290 123 240 9.6E-31 T 11-10-2018 ATC04_04610 538946918d1df02eb8be6ac85dedb3a0 370 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 5 258 3.3E-40 T 11-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ATC04_04610 538946918d1df02eb8be6ac85dedb3a0 370 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 4 284 2.3E-63 T 11-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ATC04_04610 538946918d1df02eb8be6ac85dedb3a0 370 Gene3D G3DSA:3.30.590.20 1 361 4.9E-93 T 11-10-2018 ATC04_04610 538946918d1df02eb8be6ac85dedb3a0 370 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 370 58.464 T 11-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ATC04_04610 538946918d1df02eb8be6ac85dedb3a0 370 SUPERFAMILY SSF55931 3 355 5.69E-74 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ATC04_08140 ad79f67e143c99d9fbe77dc309cbb779 125 SMART SM00345 21 80 2.5E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_08140 ad79f67e143c99d9fbe77dc309cbb779 125 Gene3D G3DSA:1.10.10.10 5 81 5.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_08140 ad79f67e143c99d9fbe77dc309cbb779 125 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 2.0E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATC04_08140 ad79f67e143c99d9fbe77dc309cbb779 125 SUPERFAMILY SSF46785 11 84 2.27E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_04600 280049e0531250d855e7477987dac8fe 479 SUPERFAMILY SSF51905 2 469 1.21E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_04600 280049e0531250d855e7477987dac8fe 479 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 68 1.1E-11 T 11-10-2018 ATC04_04600 280049e0531250d855e7477987dac8fe 479 PRINTS PR00419 Adrenodoxin reductase family signature 27 40 3.7E-8 T 11-10-2018 ATC04_04600 280049e0531250d855e7477987dac8fe 479 PRINTS PR00419 Adrenodoxin reductase family signature 4 26 3.7E-8 T 11-10-2018 ATC04_04600 280049e0531250d855e7477987dac8fe 479 Gene3D G3DSA:3.50.50.60 2 119 2.1E-11 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_09660 a93c2604aa05aeda0a1137350f942210 131 SUPERFAMILY SSF54534 17 128 8.64E-37 T 11-10-2018 ATC04_09660 a93c2604aa05aeda0a1137350f942210 131 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 38 127 2.2E-28 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ATC04_09660 a93c2604aa05aeda0a1137350f942210 131 Gene3D G3DSA:3.10.50.40 10 130 3.4E-38 T 11-10-2018 ATC04_03140 bf6da10e59165b8f5b90aec7d948248d 492 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 350 370 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ATC04_03140 bf6da10e59165b8f5b90aec7d948248d 492 TIGRFAM TIGR03173 pbuX: xanthine permease 27 434 2.1E-148 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 ATC04_03140 bf6da10e59165b8f5b90aec7d948248d 492 Pfam PF00860 Permease family 23 401 5.1E-87 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ATC04_03140 bf6da10e59165b8f5b90aec7d948248d 492 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 20 432 1.3E-99 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ATC04_14305 ed78a7fa0bbc3f1901128446394d2cb0 681 SUPERFAMILY SSF48208 170 512 1.45E-37 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 ATC04_14305 ed78a7fa0bbc3f1901128446394d2cb0 681 PIRSF PIRSF006402 1 680 5.7E-136 T 11-10-2018 IPR024705 Spermatogenesis-associated protein 20 ATC04_14305 ed78a7fa0bbc3f1901128446394d2cb0 681 SUPERFAMILY SSF52833 2 124 4.27E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_14305 ed78a7fa0bbc3f1901128446394d2cb0 681 Pfam PF03190 Protein of unknown function, DUF255 1 143 1.0E-55 T 11-10-2018 IPR004879 Domain of unknown function DUF255 ATC04_14305 ed78a7fa0bbc3f1901128446394d2cb0 681 Gene3D G3DSA:3.40.30.10 1 149 1.3E-48 T 11-10-2018 ATC04_07785 fe47c20af1d802c54af4ca14031ec5f8 396 Pfam PF03594 Benzoate membrane transport protein 15 388 5.1E-96 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ATC04_07785 fe47c20af1d802c54af4ca14031ec5f8 396 TIGRFAM TIGR00843 benE: benzoate transporter 11 388 1.3E-73 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ATC04_01570 5625af6011985432d5358413e0de01b2 216 SUPERFAMILY SSF53335 12 203 8.36E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_01570 5625af6011985432d5358413e0de01b2 216 Pfam PF13847 Methyltransferase domain 48 150 3.7E-16 T 11-10-2018 IPR025714 Methyltransferase domain ATC04_01570 5625af6011985432d5358413e0de01b2 216 Gene3D G3DSA:3.40.50.150 15 215 3.5E-36 T 11-10-2018 ATC04_14250 03220ea3fa2b17fe874ac00d7db6f306 470 Gene3D G3DSA:1.10.275.10 8 140 6.9E-53 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal ATC04_14250 03220ea3fa2b17fe874ac00d7db6f306 470 Pfam PF10415 Fumarase C C-terminus 410 468 1.4E-20 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATC04_14250 03220ea3fa2b17fe874ac00d7db6f306 470 PRINTS PR00149 Fumarate lyase superfamily signature 136 154 2.4E-32 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_14250 03220ea3fa2b17fe874ac00d7db6f306 470 PRINTS PR00149 Fumarate lyase superfamily signature 273 300 2.4E-32 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_14250 03220ea3fa2b17fe874ac00d7db6f306 470 PRINTS PR00149 Fumarate lyase superfamily signature 182 200 2.4E-32 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_14250 03220ea3fa2b17fe874ac00d7db6f306 470 PRINTS PR00149 Fumarate lyase superfamily signature 319 335 2.4E-32 T 11-10-2018 IPR000362 Fumarate lyase family ATC04_14250 03220ea3fa2b17fe874ac00d7db6f306 470 Gene3D G3DSA:1.10.40.30 410 466 1.1E-21 T 11-10-2018 ATC04_14250 03220ea3fa2b17fe874ac00d7db6f306 470 ProSitePatterns PS00163 Fumarate lyases signature. 319 328 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ATC04_14250 03220ea3fa2b17fe874ac00d7db6f306 470 Pfam PF00206 Lyase 15 344 4.3E-102 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal ATC04_14250 03220ea3fa2b17fe874ac00d7db6f306 470 Gene3D G3DSA:1.20.200.10 141 409 4.4E-109 T 11-10-2018 ATC04_14250 03220ea3fa2b17fe874ac00d7db6f306 470 Hamap MF_00743 Fumarate hydratase class II [fumC]. 7 469 79.085 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATC04_14250 03220ea3fa2b17fe874ac00d7db6f306 470 SUPERFAMILY SSF48557 6 467 1.37E-144 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 ATC04_04180 6b67a1dc56cab634d3e4d46cb87e8ae7 204 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 7 197 4.4E-39 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 ATC04_04180 6b67a1dc56cab634d3e4d46cb87e8ae7 204 Gene3D G3DSA:3.20.20.70 3 203 1.4E-58 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_04180 6b67a1dc56cab634d3e4d46cb87e8ae7 204 SUPERFAMILY SSF51366 6 200 3.77E-46 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ATC04_04180 6b67a1dc56cab634d3e4d46cb87e8ae7 204 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 5 202 32.38 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 ATC04_13320 7e0d713bbe9c7897d33000c8e2f4bd0d 238 Gene3D G3DSA:2.40.50.1020 127 236 2.3E-12 T 11-10-2018 ATC04_13320 7e0d713bbe9c7897d33000c8e2f4bd0d 238 SUPERFAMILY SSF52172 1 121 2.13E-26 T 11-10-2018 IPR011006 CheY-like superfamily ATC04_13320 7e0d713bbe9c7897d33000c8e2f4bd0d 238 SMART SM00448 2 113 7.0E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_13320 7e0d713bbe9c7897d33000c8e2f4bd0d 238 Pfam PF00072 Response regulator receiver domain 4 113 6.8E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATC04_13320 7e0d713bbe9c7897d33000c8e2f4bd0d 238 Gene3D G3DSA:3.40.50.2300 1 126 6.1E-28 T 11-10-2018 ATC04_13320 7e0d713bbe9c7897d33000c8e2f4bd0d 238 Pfam PF04397 LytTr DNA-binding domain 139 230 5.0E-24 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ATC04_13320 7e0d713bbe9c7897d33000c8e2f4bd0d 238 SMART SM00850 136 231 8.2E-29 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ATC04_04260 77b3c089476557134c12a04b72309e0a 218 Pfam PF03458 UPF0126 domain 4 76 1.9E-18 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 ATC04_04260 77b3c089476557134c12a04b72309e0a 218 Pfam PF03458 UPF0126 domain 89 163 2.2E-22 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 ATC04_05155 a75ae5293e0fac035b2235568f658be7 229 Pfam PF00482 Type II secretion system (T2SS), protein F 55 174 3.7E-9 T 11-10-2018 IPR018076 Type II secretion system F domain ATC04_08280 05341b19c9b4d7b5054c13186a9a856e 313 Pfam PF02628 Cytochrome oxidase assembly protein 25 59 3.7E-7 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 ATC04_08280 05341b19c9b4d7b5054c13186a9a856e 313 Pfam PF02628 Cytochrome oxidase assembly protein 73 294 4.4E-15 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 ATC04_10065 427f7d23b08301fd53c8c89f2aaaa716 76 Pfam PF01381 Helix-turn-helix 13 67 1.9E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_10065 427f7d23b08301fd53c8c89f2aaaa716 76 SMART SM00530 12 67 7.7E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATC04_10065 427f7d23b08301fd53c8c89f2aaaa716 76 Gene3D G3DSA:1.10.260.40 9 73 3.6E-24 T 11-10-2018 ATC04_10065 427f7d23b08301fd53c8c89f2aaaa716 76 SUPERFAMILY SSF47413 8 74 1.74E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ATC04_08095 4803d05206aad2b0eb4af0e80c8c3958 217 Pfam PF10042 Uncharacterized conserved protein (DUF2278) 3 214 1.3E-42 T 11-10-2018 IPR019268 Protein of unknown function DUF2278 ATC04_08055 d903cc15a75165e07f8c4fc5fe46b019 573 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 142 412 2.7E-48 T 11-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 ATC04_08985 c41069886f58904c0efa144054a93e99 532 Pfam PF07690 Major Facilitator Superfamily 47 386 1.9E-20 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_08985 c41069886f58904c0efa144054a93e99 532 Gene3D G3DSA:1.20.1250.20 33 428 2.9E-36 T 11-10-2018 ATC04_08985 c41069886f58904c0efa144054a93e99 532 SUPERFAMILY SSF103473 35 427 1.06E-42 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_10600 de15c87bf0f1c51a755b46ad7f6a18f3 239 Gene3D G3DSA:3.40.50.300 29 239 3.6E-39 T 11-10-2018 ATC04_10600 de15c87bf0f1c51a755b46ad7f6a18f3 239 Pfam PF00005 ABC transporter 40 171 1.9E-17 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_10600 de15c87bf0f1c51a755b46ad7f6a18f3 239 SUPERFAMILY SSF52540 35 234 7.99E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_10600 de15c87bf0f1c51a755b46ad7f6a18f3 239 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_10600 de15c87bf0f1c51a755b46ad7f6a18f3 239 SMART SM00382 49 228 1.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_04895 f4d0498b18fd25676f42b320310ebcf6 206 Pfam PF09819 ABC-type cobalt transport system, permease component 15 135 1.1E-42 T 11-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted ATC04_04895 f4d0498b18fd25676f42b320310ebcf6 206 PIRSF PIRSF037394 5 201 5.3E-64 T 11-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted ATC04_08600 c236204c06bb65aeee09c48e35fcb467 143 Pfam PF14017 Protein of unknown function (DUF4233) 25 126 2.0E-26 T 11-10-2018 IPR025327 Protein of unknown function DUF4233 ATC04_11935 98eb3976e462747e74f7e27bbbbe1767 356 Pfam PF00571 CBS domain 291 336 2.6E-6 T 11-10-2018 IPR000644 CBS domain ATC04_11935 98eb3976e462747e74f7e27bbbbe1767 356 Pfam PF01595 Domain of unknown function DUF21 10 201 3.4E-39 T 11-10-2018 IPR002550 CNNM, transmembrane domain ATC04_11935 98eb3976e462747e74f7e27bbbbe1767 356 SUPERFAMILY SSF54631 207 342 1.04E-17 T 11-10-2018 ATC04_11935 98eb3976e462747e74f7e27bbbbe1767 356 Gene3D G3DSA:3.10.580.10 199 343 1.0E-27 T 11-10-2018 ATC04_00575 221496285548bdb6fa48645ecff94e3c 205 Pfam PF01810 LysE type translocator 14 199 1.4E-40 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ATC04_18495 8748a90e34c2b42611a2374fb895141f 570 Pfam PF03432 Relaxase/Mobilisation nuclease domain 72 223 6.4E-9 T 11-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 ATC04_09060 b213dd1edc4c266213dfd81d9b6c1d56 291 SUPERFAMILY SSF161098 19 289 6.26E-66 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_09060 b213dd1edc4c266213dfd81d9b6c1d56 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 281 1.3E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_09060 b213dd1edc4c266213dfd81d9b6c1d56 291 Gene3D G3DSA:1.10.3720.10 17 282 1.2E-62 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_01270 7d1ad8cbe87913ae3cf60e3f1c6777b1 135 SMART SM00226 5 130 8.1E-47 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ATC04_01270 7d1ad8cbe87913ae3cf60e3f1c6777b1 135 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 127 1.1E-24 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ATC04_01270 7d1ad8cbe87913ae3cf60e3f1c6777b1 135 SUPERFAMILY SSF52788 4 128 4.32E-38 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily ATC04_01270 7d1ad8cbe87913ae3cf60e3f1c6777b1 135 Gene3D G3DSA:3.40.50.2300 3 133 2.7E-53 T 11-10-2018 ATC04_03620 6ffdeef7f426d7da93ca7153f342500e 325 Gene3D G3DSA:3.40.190.10 51 321 2.2E-82 T 11-10-2018 ATC04_03620 6ffdeef7f426d7da93ca7153f342500e 325 SUPERFAMILY SSF53850 51 321 4.89E-55 T 11-10-2018 ATC04_03620 6ffdeef7f426d7da93ca7153f342500e 325 Gene3D G3DSA:3.40.190.120 150 260 2.2E-82 T 11-10-2018 ATC04_03620 6ffdeef7f426d7da93ca7153f342500e 325 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 51 316 6.6E-53 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 ATC04_02375 457f04247ce52a4576b04b5e88433024 85 Pfam PF14019 Protein of unknown function (DUF4235) 5 81 5.2E-20 T 11-10-2018 IPR025329 Protein of unknown function DUF4235 ATC04_05770 2f688c8b1256ba043f02ea83fe7d3b0a 443 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 86 399 1.1E-10 T 11-10-2018 IPR021145 Portal protein ATC04_09395 2cf3f61111246cf238deed1f8bc9862a 196 SUPERFAMILY SSF50118 88 193 5.67E-10 T 11-10-2018 ATC04_09395 2cf3f61111246cf238deed1f8bc9862a 196 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 91 192 2.5E-9 T 11-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 ATC04_09920 0f52397add51849dd715d1bb6539878f 621 Pfam PF07510 Protein of unknown function (DUF1524) 459 596 4.9E-8 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 ATC04_09920 0f52397add51849dd715d1bb6539878f 621 Pfam PF03235 Protein of unknown function DUF262 16 232 5.2E-34 T 11-10-2018 IPR004919 Domain of unknown function DUF262 ATC04_12440 fa75cc535d4f3b5d7fbaf31dee0b53b2 755 Pfam PF13245 AAA domain 196 567 2.7E-11 T 11-10-2018 ATC04_12440 fa75cc535d4f3b5d7fbaf31dee0b53b2 755 Gene3D G3DSA:3.40.50.300 182 358 6.2E-10 T 11-10-2018 ATC04_12440 fa75cc535d4f3b5d7fbaf31dee0b53b2 755 SUPERFAMILY SSF52540 181 748 4.24E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12440 fa75cc535d4f3b5d7fbaf31dee0b53b2 755 Gene3D G3DSA:3.40.50.300 598 755 3.7E-14 T 11-10-2018 ATC04_12440 fa75cc535d4f3b5d7fbaf31dee0b53b2 755 Gene3D G3DSA:3.40.50.300 451 597 1.2E-8 T 11-10-2018 ATC04_04275 5989d912960b04323c62d1758e567da8 131 Gene3D G3DSA:3.10.290.10 5 100 1.0E-28 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ATC04_04275 5989d912960b04323c62d1758e567da8 131 PIRSF PIRSF016821 7 128 1.1E-42 T 11-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 ATC04_04275 5989d912960b04323c62d1758e567da8 131 SUPERFAMILY SSF55174 9 95 4.45E-21 T 11-10-2018 ATC04_04275 5989d912960b04323c62d1758e567da8 131 SMART SM00363 10 68 5.3E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_04275 5989d912960b04323c62d1758e567da8 131 Pfam PF01479 S4 domain 11 56 1.3E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATC04_02590 12bd0f8185e8f92f99af82c026132207 502 SUPERFAMILY SSF103473 23 481 2.79E-47 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_02590 12bd0f8185e8f92f99af82c026132207 502 Pfam PF07690 Major Facilitator Superfamily 26 290 8.4E-25 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_02590 12bd0f8185e8f92f99af82c026132207 502 Pfam PF07690 Major Facilitator Superfamily 300 470 3.6E-8 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_02590 12bd0f8185e8f92f99af82c026132207 502 Gene3D G3DSA:1.20.1250.20 276 488 1.4E-14 T 11-10-2018 ATC04_02590 12bd0f8185e8f92f99af82c026132207 502 Gene3D G3DSA:1.20.1720.10 21 212 1.6E-32 T 11-10-2018 ATC04_04490 da18be99e3a6880e3a96da0027ba1885 126 Gene3D G3DSA:2.40.50.100 2 124 3.9E-45 T 11-10-2018 ATC04_04490 da18be99e3a6880e3a96da0027ba1885 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 7 117 1.1E-41 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 ATC04_04490 da18be99e3a6880e3a96da0027ba1885 126 Pfam PF01597 Glycine cleavage H-protein 8 108 1.9E-37 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate ATC04_04490 da18be99e3a6880e3a96da0027ba1885 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ATC04_04490 da18be99e3a6880e3a96da0027ba1885 126 SUPERFAMILY SSF51230 5 118 1.7E-35 T 11-10-2018 IPR011053 Single hybrid motif ATC04_04490 da18be99e3a6880e3a96da0027ba1885 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 122 35.173 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 ATC04_05400 81f272d59febbef76e5202d6166ae69f 229 Pfam PF04973 Nicotinamide mononucleotide transporter 11 195 8.2E-15 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 ATC04_00665 f7b43df95b495a16f8eb97faa5b11241 321 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 39 263 4.0E-57 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_00665 f7b43df95b495a16f8eb97faa5b11241 321 Pfam PF02096 60Kd inner membrane protein 40 262 1.7E-54 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ATC04_17630 f1be182dac3cfead4a5f8af7beb994c7 113 Gene3D G3DSA:3.40.1350.10 9 100 4.3E-12 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 ATC04_17630 f1be182dac3cfead4a5f8af7beb994c7 113 Pfam PF08774 VRR-NUC domain 32 89 1.9E-9 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 ATC04_01005 32251ce0c98d94a83429d2bf4e0d12db 164 Pfam PF09349 OHCU decarboxylase 7 159 6.7E-37 T 11-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ATC04_01005 32251ce0c98d94a83429d2bf4e0d12db 164 Gene3D G3DSA:1.10.3330.10 1 164 3.8E-49 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ATC04_01005 32251ce0c98d94a83429d2bf4e0d12db 164 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 6 161 2.4E-50 T 11-10-2018 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 ATC04_01005 32251ce0c98d94a83429d2bf4e0d12db 164 SUPERFAMILY SSF158694 3 161 6.54E-40 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ATC04_16080 4963cc6d58e5f4ab67c57e409ab1ba4e 192 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 12 187 5.8E-57 T 11-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 ATC04_16080 4963cc6d58e5f4ab67c57e409ab1ba4e 192 Gene3D G3DSA:2.60.130.10 6 188 7.2E-58 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ATC04_16080 4963cc6d58e5f4ab67c57e409ab1ba4e 192 Pfam PF00775 Dioxygenase 18 166 1.4E-10 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ATC04_16080 4963cc6d58e5f4ab67c57e409ab1ba4e 192 SUPERFAMILY SSF49482 8 187 3.4E-44 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ATC04_13710 43f2c461384dc0822f27a085f7367ced 345 Pfam PF00005 ABC transporter 45 197 8.4E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_13710 43f2c461384dc0822f27a085f7367ced 345 SMART SM00382 54 255 6.7E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_13710 43f2c461384dc0822f27a085f7367ced 345 SUPERFAMILY SSF52540 19 269 1.21E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_13710 43f2c461384dc0822f27a085f7367ced 345 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 247 336 7.4E-27 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_13710 43f2c461384dc0822f27a085f7367ced 345 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATC04_13710 43f2c461384dc0822f27a085f7367ced 345 Gene3D G3DSA:3.40.50.300 17 339 2.2E-101 T 11-10-2018 ATC04_13710 43f2c461384dc0822f27a085f7367ced 345 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 249 316 5.4E-17 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ATC04_07245 906840e08dbc9563d763f9e7733a7191 240 Pfam PF01476 LysM domain 182 237 2.3E-4 T 11-10-2018 IPR018392 LysM domain ATC04_07245 906840e08dbc9563d763f9e7733a7191 240 Gene3D G3DSA:3.10.350.10 179 235 1.2E-7 T 11-10-2018 IPR036779 LysM domain superfamily ATC04_00675 794e2a62b09412efdf8eb840c9e952fa 213 SUPERFAMILY SSF53335 22 208 5.52E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_00675 794e2a62b09412efdf8eb840c9e952fa 213 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 209 22.211 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ATC04_00675 794e2a62b09412efdf8eb840c9e952fa 213 Pfam PF02527 rRNA small subunit methyltransferase G 25 197 1.5E-46 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ATC04_00675 794e2a62b09412efdf8eb840c9e952fa 213 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 195 3.0E-38 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ATC04_00675 794e2a62b09412efdf8eb840c9e952fa 213 Gene3D G3DSA:3.40.50.150 12 212 6.8E-51 T 11-10-2018 ATC04_12510 2cd3cd53a1a9a09d6f46372ee9f3e944 489 Pfam PF17173 Domain of unknown function (DUF5129) 33 378 1.3E-123 T 11-10-2018 IPR033435 Domain of unknown function DUF5129 ATC04_03315 36d77886c592951336d79d0348169c9f 573 Pfam PF10081 Alpha/beta-hydrolase family 274 562 6.1E-104 T 11-10-2018 IPR027787 Alpha/beta-hydrolase, catalytic domain ATC04_03315 36d77886c592951336d79d0348169c9f 573 Pfam PF15420 Alpha/beta-hydrolase family N-terminus 29 257 1.4E-47 T 11-10-2018 IPR027788 Alpha/beta-hydrolase, N-terminal domain ATC04_06960 8790246ad6248cf521d125239479dd7e 513 Pfam PF13520 Amino acid permease 27 460 3.1E-55 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_06960 8790246ad6248cf521d125239479dd7e 513 Gene3D G3DSA:1.20.1740.10 22 499 1.7E-107 T 11-10-2018 ATC04_06960 8790246ad6248cf521d125239479dd7e 513 PIRSF PIRSF006060 14 502 1.1E-83 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_02130 c62d6d65c6df869bd1041ce47eedc4b8 248 Gene3D G3DSA:3.40.50.720 3 247 5.9E-70 T 11-10-2018 ATC04_02130 c62d6d65c6df869bd1041ce47eedc4b8 248 SUPERFAMILY SSF51735 6 245 6.67E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_02130 c62d6d65c6df869bd1041ce47eedc4b8 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02130 c62d6d65c6df869bd1041ce47eedc4b8 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02130 c62d6d65c6df869bd1041ce47eedc4b8 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02130 c62d6d65c6df869bd1041ce47eedc4b8 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATC04_02130 c62d6d65c6df869bd1041ce47eedc4b8 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 5.2E-59 T 11-10-2018 ATC04_02130 c62d6d65c6df869bd1041ce47eedc4b8 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.9E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02130 c62d6d65c6df869bd1041ce47eedc4b8 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.9E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02130 c62d6d65c6df869bd1041ce47eedc4b8 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 9.9E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02130 c62d6d65c6df869bd1041ce47eedc4b8 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.9E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02130 c62d6d65c6df869bd1041ce47eedc4b8 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 9.9E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_02130 c62d6d65c6df869bd1041ce47eedc4b8 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.9E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ATC04_06580 e14ce5d8625b1a6d86498a3eab743f62 277 SUPERFAMILY SSF53448 18 249 2.0E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_06580 e14ce5d8625b1a6d86498a3eab743f62 277 Pfam PF00535 Glycosyl transferase family 2 23 157 2.5E-25 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATC04_06580 e14ce5d8625b1a6d86498a3eab743f62 277 Gene3D G3DSA:3.90.550.10 7 274 2.7E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_02265 517225449657b4ca00089d2e1acc3646 92 Pfam PF01527 Transposase 3 75 2.1E-10 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATC04_02265 517225449657b4ca00089d2e1acc3646 92 Gene3D G3DSA:1.10.10.60 13 87 2.4E-5 T 11-10-2018 ATC04_02265 517225449657b4ca00089d2e1acc3646 92 SUPERFAMILY SSF46689 3 74 5.38E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_12530 8d4e3c78d3927c11ce9dc11efd2e9887 102 Gene3D G3DSA:3.40.630.30 1 101 2.6E-15 T 11-10-2018 ATC04_12530 8d4e3c78d3927c11ce9dc11efd2e9887 102 Pfam PF13302 Acetyltransferase (GNAT) domain 1 69 6.4E-9 T 11-10-2018 IPR000182 GNAT domain ATC04_12530 8d4e3c78d3927c11ce9dc11efd2e9887 102 SUPERFAMILY SSF55729 2 73 2.05E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_13665 8ac121a115facd55005e494b1f9f6d89 452 Gene3D G3DSA:3.40.190.10 161 434 2.4E-45 T 11-10-2018 ATC04_13665 8ac121a115facd55005e494b1f9f6d89 452 Pfam PF01547 Bacterial extracellular solute-binding protein 63 363 1.2E-16 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ATC04_13665 8ac121a115facd55005e494b1f9f6d89 452 SUPERFAMILY SSF53850 48 450 2.52E-37 T 11-10-2018 ATC04_13665 8ac121a115facd55005e494b1f9f6d89 452 Gene3D G3DSA:3.40.190.10 75 398 2.4E-45 T 11-10-2018 ATC04_00880 3dc5c1583205f56d34e1d9da9c285d29 192 Pfam PF01872 RibD C-terminal domain 6 177 2.7E-14 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ATC04_00880 3dc5c1583205f56d34e1d9da9c285d29 192 SUPERFAMILY SSF53597 8 188 8.67E-20 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_00880 3dc5c1583205f56d34e1d9da9c285d29 192 Gene3D G3DSA:3.40.430.10 6 186 3.0E-24 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_15805 974dfa6bee39945989605689bdaec9d5 443 Pfam PF13416 Bacterial extracellular solute-binding protein 59 371 6.5E-29 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ATC04_15805 974dfa6bee39945989605689bdaec9d5 443 Gene3D G3DSA:3.40.190.10 62 367 2.9E-53 T 11-10-2018 ATC04_15805 974dfa6bee39945989605689bdaec9d5 443 Gene3D G3DSA:3.40.190.10 156 414 2.9E-53 T 11-10-2018 ATC04_15805 974dfa6bee39945989605689bdaec9d5 443 SUPERFAMILY SSF53850 42 437 9.32E-43 T 11-10-2018 ATC04_12870 7496b012f3b42bcb071d25ce3761bc1e 425 Pfam PF10011 Predicted membrane protein (DUF2254) 15 364 1.7E-84 T 11-10-2018 IPR018723 Protein of unknown function DUF2254, membrane ATC04_11245 1b7198d191968db0995fd2e351105d55 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.3E-17 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATC04_11245 1b7198d191968db0995fd2e351105d55 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.3E-17 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATC04_11245 1b7198d191968db0995fd2e351105d55 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.3E-17 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATC04_11245 1b7198d191968db0995fd2e351105d55 91 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.6E-26 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATC04_11245 1b7198d191968db0995fd2e351105d55 91 PIRSF PIRSF004669 1 89 1.3E-30 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATC04_08785 f9019da5be0cb6c7a673740195f9863b 179 Gene3D G3DSA:1.25.40.600 1 140 9.6E-30 T 11-10-2018 IPR038523 AmiS/UreI transporter superfamily ATC04_08785 f9019da5be0cb6c7a673740195f9863b 179 Pfam PF02293 AmiS/UreI family transporter 1 134 3.7E-29 T 11-10-2018 IPR003211 AmiS/UreI transporter GO:0016020 ATC04_15860 3c2cd4412a045ec10ade68c9c63d5d20 215 SUPERFAMILY SSF53271 3 209 1.31E-61 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ATC04_15860 3c2cd4412a045ec10ade68c9c63d5d20 215 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 210 1.1E-74 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 ATC04_15860 3c2cd4412a045ec10ade68c9c63d5d20 215 Gene3D G3DSA:3.40.50.2020 1 210 3.9E-69 T 11-10-2018 ATC04_15860 3c2cd4412a045ec10ade68c9c63d5d20 215 Pfam PF14681 Uracil phosphoribosyltransferase 5 209 4.8E-61 T 11-10-2018 ATC04_15860 3c2cd4412a045ec10ade68c9c63d5d20 215 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 211 41.336 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 ATC04_12880 907707b93e860538f3aec0258a3bb1b0 72 Gene3D G3DSA:3.10.129.10 16 72 1.9E-5 T 11-10-2018 ATC04_12880 907707b93e860538f3aec0258a3bb1b0 72 SUPERFAMILY SSF54637 20 63 1.87E-5 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_09680 7ef86689f72d6293e0e6a2ddf7d9776f 537 PIRSF PIRSF018077 10 92 5.0E-9 T 11-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 ATC04_09680 7ef86689f72d6293e0e6a2ddf7d9776f 537 PIRSF PIRSF018077 82 533 1.7E-151 T 11-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 ATC04_09680 7ef86689f72d6293e0e6a2ddf7d9776f 537 Pfam PF03136 Pup-ligase protein 5 490 6.2E-176 T 11-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 ATC04_09680 7ef86689f72d6293e0e6a2ddf7d9776f 537 TIGRFAM TIGR03688 pupylate_PafA2: proteasome accessory factor PafA2 4 521 2.5E-183 T 11-10-2018 IPR022366 Pup deamidase GO:0008233|GO:0016811 ATC04_06020 4ad7bfdc82ec82e80b0af318ab17119c 82 Gene3D G3DSA:1.20.5.1030 17 75 5.8E-15 T 11-10-2018 IPR038379 SecE superfamily ATC04_06020 4ad7bfdc82ec82e80b0af318ab17119c 82 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 22 76 1.5E-15 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 ATC04_06020 4ad7bfdc82ec82e80b0af318ab17119c 82 Hamap MF_00422 Protein translocase subunit SecE [secE]. 19 74 11.772 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATC04_06020 4ad7bfdc82ec82e80b0af318ab17119c 82 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 24 71 5.3E-16 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATC04_11405 f80eb13808217437b01db1df7230c97d 201 SUPERFAMILY SSF53597 3 174 1.83E-24 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_11405 f80eb13808217437b01db1df7230c97d 201 Gene3D G3DSA:3.40.430.10 1 194 7.8E-44 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_11405 f80eb13808217437b01db1df7230c97d 201 Pfam PF01872 RibD C-terminal domain 4 182 1.8E-23 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ATC04_00740 d7f161fbd7714ba219ba7571824763d3 332 SUPERFAMILY SSF53448 9 236 8.84E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_00740 d7f161fbd7714ba219ba7571824763d3 332 Gene3D G3DSA:3.90.550.10 2 239 3.0E-43 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_00740 d7f161fbd7714ba219ba7571824763d3 332 Pfam PF00535 Glycosyl transferase family 2 10 141 1.6E-30 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATC04_14430 8dbbd1c8710ab4582dc26d8f7681faf6 136 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 14 106 3.1E-10 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ATC04_14430 8dbbd1c8710ab4582dc26d8f7681faf6 136 SUPERFAMILY SSF53927 5 134 1.2E-35 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ATC04_14430 8dbbd1c8710ab4582dc26d8f7681faf6 136 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 102 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ATC04_14430 8dbbd1c8710ab4582dc26d8f7681faf6 136 Gene3D G3DSA:3.40.140.10 2 136 2.8E-42 T 11-10-2018 ATC04_13875 77dab3216083ee65a39d953cffa062a5 129 Gene3D G3DSA:3.10.180.10 1 129 1.4E-43 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_13875 77dab3216083ee65a39d953cffa062a5 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 124 6.2E-11 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_13875 77dab3216083ee65a39d953cffa062a5 129 SUPERFAMILY SSF54593 2 128 1.48E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_17545 41ffc2297a58157bf06f9f5d29e6a51f 1540 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 127 472 6.5E-68 T 11-10-2018 IPR010090 Phage tail tape measure protein ATC04_17545 41ffc2297a58157bf06f9f5d29e6a51f 1540 Pfam PF10145 Phage-related minor tail protein 167 366 1.2E-45 T 11-10-2018 IPR010090 Phage tail tape measure protein ATC04_09530 71f9ef0f1866a857528ce5e6fd55a82e 556 SUPERFAMILY SSF81342 18 298 2.67E-61 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ATC04_09530 71f9ef0f1866a857528ce5e6fd55a82e 556 Pfam PF13631 Cytochrome b(N-terminal)/b6/petB 119 292 1.7E-58 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 ATC04_09530 71f9ef0f1866a857528ce5e6fd55a82e 556 Gene3D G3DSA:1.20.810.10 4 458 1.3E-90 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 ATC04_18220 a57870e9417f3bb60b438edb09122c9c 278 SUPERFAMILY SSF54060 42 255 3.18E-46 T 11-10-2018 ATC04_18220 a57870e9417f3bb60b438edb09122c9c 278 SMART SM00477 48 256 1.6E-26 T 11-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 ATC04_18220 a57870e9417f3bb60b438edb09122c9c 278 SMART SM00892 47 256 1.5E-43 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 ATC04_18220 a57870e9417f3bb60b438edb09122c9c 278 Gene3D G3DSA:3.40.570.10 26 263 1.8E-42 T 11-10-2018 ATC04_18220 a57870e9417f3bb60b438edb09122c9c 278 Pfam PF01223 DNA/RNA non-specific endonuclease 39 253 6.5E-44 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 ATC04_13000 c862f3da1dbb80247236d9e95217e47b 149 Pfam PF14110 Domain of unknown function (DUF4282) 6 88 1.6E-19 T 11-10-2018 IPR025557 Protein of unknown function DUF4282 ATC04_14575 b42e24927450de0ac00c374ff522fb4f 398 Pfam PF00067 Cytochrome P450 272 358 1.3E-15 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_14575 b42e24927450de0ac00c374ff522fb4f 398 Gene3D G3DSA:1.10.630.10 15 398 6.4E-82 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_14575 b42e24927450de0ac00c374ff522fb4f 398 PRINTS PR00359 B-class P450 signature 316 331 9.9E-23 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_14575 b42e24927450de0ac00c374ff522fb4f 398 PRINTS PR00359 B-class P450 signature 86 97 9.9E-23 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_14575 b42e24927450de0ac00c374ff522fb4f 398 PRINTS PR00359 B-class P450 signature 195 217 9.9E-23 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_14575 b42e24927450de0ac00c374ff522fb4f 398 PRINTS PR00359 B-class P450 signature 288 315 9.9E-23 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_14575 b42e24927450de0ac00c374ff522fb4f 398 PRINTS PR00359 B-class P450 signature 271 282 9.9E-23 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_14575 b42e24927450de0ac00c374ff522fb4f 398 PRINTS PR00359 B-class P450 signature 337 346 9.9E-23 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_14575 b42e24927450de0ac00c374ff522fb4f 398 PRINTS PR00359 B-class P450 signature 346 357 9.9E-23 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ATC04_14575 b42e24927450de0ac00c374ff522fb4f 398 SUPERFAMILY SSF48264 22 396 2.88E-67 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ATC04_14575 b42e24927450de0ac00c374ff522fb4f 398 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 339 348 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 ATC04_05390 15c3819a9a46fc5b7066a935c91c491a 142 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 24 134 1.8E-24 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 ATC04_05390 15c3819a9a46fc5b7066a935c91c491a 142 SUPERFAMILY SSF54637 18 141 6.19E-24 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_05390 15c3819a9a46fc5b7066a935c91c491a 142 Gene3D G3DSA:3.10.129.10 3 140 1.0E-38 T 11-10-2018 ATC04_05390 15c3819a9a46fc5b7066a935c91c491a 142 Pfam PF03061 Thioesterase superfamily 50 128 5.3E-12 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ATC04_14390 cde4f0ecbce07ff38841b9ba9ca977a2 232 Pfam PF04417 Protein of unknown function (DUF501) 40 168 8.3E-39 T 11-10-2018 IPR007511 Protein of unknown function DUF501 ATC04_02070 8b7646405c529ecca910b9e23f19d806 98 Gene3D G3DSA:3.30.70.100 1 98 1.6E-32 T 11-10-2018 ATC04_02070 8b7646405c529ecca910b9e23f19d806 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 69 1.5E-15 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ATC04_02070 8b7646405c529ecca910b9e23f19d806 98 SUPERFAMILY SSF54909 1 96 1.24E-22 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_04850 a5122b93e0c61d9840b57a5c903fd6a6 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 181 4.1E-62 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 ATC04_04850 a5122b93e0c61d9840b57a5c903fd6a6 193 SUPERFAMILY SSF51283 2 183 6.41E-53 T 11-10-2018 IPR036157 dUTPase-like superfamily ATC04_04850 a5122b93e0c61d9840b57a5c903fd6a6 193 Pfam PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) 4 156 7.8E-11 T 11-10-2018 IPR010550 Deoxycytidine triphosphate deaminase, bacterial GO:0008829|GO:0009394 ATC04_04850 a5122b93e0c61d9840b57a5c903fd6a6 193 Gene3D G3DSA:2.70.40.10 2 186 1.3E-56 T 11-10-2018 IPR036157 dUTPase-like superfamily ATC04_04850 a5122b93e0c61d9840b57a5c903fd6a6 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 182 32.604 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 ATC04_15130 4c94732127d92d4b5b9c69afd212dca0 393 SUPERFAMILY SSF51445 68 358 3.06E-29 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ATC04_14355 ed6fe0c374a6215ba58c8aee93c284b8 97 Pfam PF01527 Transposase 1 81 6.1E-15 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATC04_14355 ed6fe0c374a6215ba58c8aee93c284b8 97 Gene3D G3DSA:1.10.10.60 8 95 1.4E-15 T 11-10-2018 ATC04_14355 ed6fe0c374a6215ba58c8aee93c284b8 97 SUPERFAMILY SSF46689 3 93 2.87E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_18175 236c7bf0990358c26b4e6522f729ff17 139 SUPERFAMILY SSF50475 1 112 3.34E-22 T 11-10-2018 ATC04_18175 236c7bf0990358c26b4e6522f729ff17 139 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 1 127 1.7E-34 T 11-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain ATC04_18175 236c7bf0990358c26b4e6522f729ff17 139 Gene3D G3DSA:2.30.110.10 1 139 9.4E-38 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ATC04_02045 616e5944d65ddf90f0dde3473deb6eb4 179 SUPERFAMILY SSF111369 66 168 3.4E-6 T 11-10-2018 ATC04_02045 616e5944d65ddf90f0dde3473deb6eb4 179 Gene3D G3DSA:2.40.50.100 77 178 1.7E-7 T 11-10-2018 ATC04_01495 afa63f516c634b539e77d7facf73e9d8 248 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 209 9.5E-38 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ATC04_01495 afa63f516c634b539e77d7facf73e9d8 248 Gene3D G3DSA:3.90.226.10 5 230 6.0E-55 T 11-10-2018 ATC04_01495 afa63f516c634b539e77d7facf73e9d8 248 SUPERFAMILY SSF52096 9 244 2.05E-55 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_07125 6c21369b3ca753252832881a0c877c1e 411 Gene3D G3DSA:3.90.1150.10 7 381 2.7E-128 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_07125 6c21369b3ca753252832881a0c877c1e 411 PIRSF PIRSF005572 3 393 7.8E-102 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ATC04_07125 6c21369b3ca753252832881a0c877c1e 411 Gene3D G3DSA:3.40.640.10 17 264 2.7E-128 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_07125 6c21369b3ca753252832881a0c877c1e 411 SUPERFAMILY SSF53383 6 388 6.05E-88 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_07125 6c21369b3ca753252832881a0c877c1e 411 Pfam PF00266 Aminotransferase class-V 6 379 1.7E-58 T 11-10-2018 IPR000192 Aminotransferase class V domain ATC04_13405 bc73eb8cccd58a05120c3fbe8e763241 506 Gene3D G3DSA:3.40.640.10 124 370 4.7E-116 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_13405 bc73eb8cccd58a05120c3fbe8e763241 506 SUPERFAMILY SSF53383 52 496 1.67E-108 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_13405 bc73eb8cccd58a05120c3fbe8e763241 506 Gene3D G3DSA:3.90.1150.170 69 489 4.7E-116 T 11-10-2018 ATC04_13405 bc73eb8cccd58a05120c3fbe8e763241 506 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 96 425 7.6E-55 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 ATC04_03230 27635755590ee6d7598d2caf18d571c6 173 Gene3D G3DSA:3.40.50.1820 1 87 4.8E-5 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_09080 c9a65446b70b8cf0774977413bbcf011 293 Gene3D G3DSA:3.60.20.10 1 292 4.2E-82 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ATC04_09080 c9a65446b70b8cf0774977413bbcf011 293 SUPERFAMILY SSF56235 2 267 1.97E-31 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ATC04_09080 c9a65446b70b8cf0774977413bbcf011 293 Pfam PF13230 Glutamine amidotransferases class-II 54 283 5.9E-14 T 11-10-2018 IPR026869 Putative glutamine amidotransferase type 2 ATC04_00215 ddf392ac7ed0f2937152a59c2a05299d 165 Pfam PF03703 Bacterial PH domain 79 155 3.3E-14 T 11-10-2018 IPR005182 Domain of unknown function DUF304 ATC04_08320 70066f11156e7e2259304b392e3f2f70 114 SUPERFAMILY SSF117916 17 108 7.52E-27 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ATC04_08320 70066f11156e7e2259304b392e3f2f70 114 Gene3D G3DSA:3.30.300.130 11 109 1.3E-30 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ATC04_08320 70066f11156e7e2259304b392e3f2f70 114 Pfam PF01883 Iron-sulfur cluster assembly protein 17 80 6.9E-20 T 11-10-2018 IPR002744 MIP18 family-like ATC04_05205 7c259b262410b23bf7f6f83fc76a94ea 216 Pfam PF12840 Helix-turn-helix domain 30 83 2.8E-12 T 11-10-2018 ATC04_05205 7c259b262410b23bf7f6f83fc76a94ea 216 Gene3D G3DSA:1.10.10.10 29 140 1.2E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_05205 7c259b262410b23bf7f6f83fc76a94ea 216 SMART SM00418 30 109 6.5E-4 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATC04_05205 7c259b262410b23bf7f6f83fc76a94ea 216 SUPERFAMILY SSF46785 24 114 2.93E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_11610 6d5647a27a73345770483a1ff068046e 305 SMART SM00382 31 209 2.6E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_11610 6d5647a27a73345770483a1ff068046e 305 Gene3D G3DSA:3.40.50.300 1 232 9.8E-38 T 11-10-2018 ATC04_11610 6d5647a27a73345770483a1ff068046e 305 Pfam PF00005 ABC transporter 22 158 6.7E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_11610 6d5647a27a73345770483a1ff068046e 305 SUPERFAMILY SSF52540 4 220 1.48E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_05460 fa3260cd343326f6d5653f5fa6a9e51f 165 Gene3D G3DSA:3.30.300.130 5 103 4.8E-24 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ATC04_05460 fa3260cd343326f6d5653f5fa6a9e51f 165 SUPERFAMILY SSF117916 8 101 7.19E-23 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ATC04_05460 fa3260cd343326f6d5653f5fa6a9e51f 165 Pfam PF01883 Iron-sulfur cluster assembly protein 16 68 4.8E-11 T 11-10-2018 IPR002744 MIP18 family-like ATC04_05460 fa3260cd343326f6d5653f5fa6a9e51f 165 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 18 163 8.1E-60 T 11-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit ATC04_16795 9944d33d755a55b1a7f8a02bf26ab8e8 426 Gene3D G3DSA:1.20.1250.20 4 402 1.0E-32 T 11-10-2018 ATC04_16795 9944d33d755a55b1a7f8a02bf26ab8e8 426 SUPERFAMILY SSF103473 10 408 7.85E-40 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_16795 9944d33d755a55b1a7f8a02bf26ab8e8 426 Pfam PF05977 Transmembrane secretion effector 7 391 1.7E-29 T 11-10-2018 IPR010290 Transmembrane secretion effector ATC04_18310 a28693c2b615c8ed9d39b668e8ce4f4a 354 Gene3D G3DSA:2.70.70.10 201 350 6.6E-35 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_18310 a28693c2b615c8ed9d39b668e8ce4f4a 354 Pfam PF01551 Peptidase family M23 246 343 4.8E-21 T 11-10-2018 IPR016047 Peptidase M23 ATC04_18310 a28693c2b615c8ed9d39b668e8ce4f4a 354 SUPERFAMILY SSF51261 218 347 1.36E-34 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_18550 a28693c2b615c8ed9d39b668e8ce4f4a 354 Gene3D G3DSA:2.70.70.10 201 350 6.6E-35 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_18550 a28693c2b615c8ed9d39b668e8ce4f4a 354 Pfam PF01551 Peptidase family M23 246 343 4.8E-21 T 11-10-2018 IPR016047 Peptidase M23 ATC04_18550 a28693c2b615c8ed9d39b668e8ce4f4a 354 SUPERFAMILY SSF51261 218 347 1.36E-34 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_10270 c6d9f132885dbc23b8c8ebf1bd4085ff 149 SUPERFAMILY SSF52833 1 148 2.19E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_10270 c6d9f132885dbc23b8c8ebf1bd4085ff 149 Gene3D G3DSA:3.40.30.10 1 149 1.7E-28 T 11-10-2018 ATC04_10270 c6d9f132885dbc23b8c8ebf1bd4085ff 149 Pfam PF00578 AhpC/TSA family 5 126 8.6E-21 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ATC04_15380 ba812bc9edff7c0b469da1bae9c300d5 289 Gene3D G3DSA:3.40.30.10 60 289 2.9E-42 T 11-10-2018 ATC04_15380 ba812bc9edff7c0b469da1bae9c300d5 289 SUPERFAMILY SSF52833 112 270 7.47E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ATC04_15380 ba812bc9edff7c0b469da1bae9c300d5 289 Pfam PF13462 Thioredoxin 115 271 1.7E-22 T 11-10-2018 IPR012336 Thioredoxin-like fold ATC04_11285 ae18d19c1fe5ba561e60fa9bf886288f 392 SUPERFAMILY SSF117143 91 352 9.68E-54 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ATC04_11285 ae18d19c1fe5ba561e60fa9bf886288f 392 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 373 6.5E-81 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ATC04_11285 ae18d19c1fe5ba561e60fa9bf886288f 392 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 312 390 5.8E-22 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ATC04_11285 ae18d19c1fe5ba561e60fa9bf886288f 392 Pfam PF00460 Flagella basal body rod protein 5 35 2.7E-9 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ATC04_04930 f499482093a3325974c965303cfd23bf 207 Pfam PF01810 LysE type translocator 15 204 1.2E-31 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ATC04_04930 f499482093a3325974c965303cfd23bf 207 PIRSF PIRSF006324 1 207 1.2E-47 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ATC04_12665 83af8f2124dc6f404affb155d3ed5758 74 Pfam PF11248 Protein of unknown function (DUF3046) 1 60 2.9E-24 T 11-10-2018 IPR021408 Protein of unknown function DUF3046 ATC04_09545 499110197c09b1a612c74f539979b286 185 Pfam PF00510 Cytochrome c oxidase subunit III 2 183 1.2E-16 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09545 499110197c09b1a612c74f539979b286 185 SUPERFAMILY SSF81452 1 184 3.66E-47 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_09545 499110197c09b1a612c74f539979b286 185 Gene3D G3DSA:1.20.120.80 1 185 4.1E-49 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_13060 6a739f4354e7b1ec08511e842388b611 646 Pfam PF02720 Domain of unknown function (DUF222) 460 564 3.6E-8 T 11-10-2018 IPR003870 Domain of unknown function DUF222 ATC04_13060 6a739f4354e7b1ec08511e842388b611 646 SMART SM00507 555 607 4.9E-5 T 11-10-2018 IPR003615 HNH nuclease ATC04_15985 8f117b1496cd824617e76c88e0fa489c 83 Gene3D G3DSA:3.10.20.30 3 83 3.8E-11 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ATC04_15985 8f117b1496cd824617e76c88e0fa489c 83 SUPERFAMILY SSF54285 4 83 4.25E-8 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ATC04_01770 4f554d2ac818a2741cdec166f8d884db 112 SUPERFAMILY SSF159888 14 88 6.54E-14 T 11-10-2018 ATC04_01770 4f554d2ac818a2741cdec166f8d884db 112 Pfam PF08818 Domain of unknown function (DU1801) 23 110 1.9E-10 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 ATC04_01770 4f554d2ac818a2741cdec166f8d884db 112 Gene3D G3DSA:1.10.10.810 11 91 2.8E-5 T 11-10-2018 ATC04_13280 d15796f03daf80fbaa0ee7abb88cc0db 372 Pfam PF00676 Dehydrogenase E1 component 53 314 8.7E-73 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ATC04_13280 d15796f03daf80fbaa0ee7abb88cc0db 372 SUPERFAMILY SSF52518 38 358 7.8E-90 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_13280 d15796f03daf80fbaa0ee7abb88cc0db 372 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 19 354 2.0E-128 T 11-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ATC04_13280 d15796f03daf80fbaa0ee7abb88cc0db 372 Gene3D G3DSA:3.40.50.970 3 359 7.1E-109 T 11-10-2018 ATC04_11750 e805fc3a817f3bb84e7a55935199276e 430 Pfam PF01594 AI-2E family transporter 106 420 1.2E-48 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like ATC04_07160 df84310c781a9d9243450a8cc551275d 336 Gene3D G3DSA:3.20.20.30 18 315 4.4E-41 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_07160 df84310c781a9d9243450a8cc551275d 336 SUPERFAMILY SSF51679 10 328 1.7E-43 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ATC04_07160 df84310c781a9d9243450a8cc551275d 336 Pfam PF00296 Luciferase-like monooxygenase 9 257 4.0E-27 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ATC04_10225 f4312a95b280d69dd7fdaa7ebb93ce1c 473 Pfam PF02447 GntP family permease 17 465 1.4E-121 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ATC04_10225 f4312a95b280d69dd7fdaa7ebb93ce1c 473 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 18 466 9.1E-109 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ATC04_10225 f4312a95b280d69dd7fdaa7ebb93ce1c 473 PIRSF PIRSF002746 11 470 3.0E-147 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ATC04_15580 11923969e6812908eca61b8af72c0c73 537 SUPERFAMILY SSF56563 243 456 3.66E-10 T 11-10-2018 ATC04_15580 11923969e6812908eca61b8af72c0c73 537 Pfam PF04586 Caudovirus prohead serine protease 16 162 9.8E-14 T 11-10-2018 IPR006433 Prohead protease ATC04_11680 b35d637f77eeac786ecb59c62373f70d 192 Pfam PF09438 Domain of unknown function (DUF2017) 9 188 2.4E-44 T 11-10-2018 IPR018561 Domain of unknown function DUF2017 ATC04_06680 3e4eaf6bedd57da09f1a4302c076c3cd 150 Pfam PF13673 Acetyltransferase (GNAT) domain 33 140 2.8E-15 T 11-10-2018 IPR000182 GNAT domain ATC04_06680 3e4eaf6bedd57da09f1a4302c076c3cd 150 SUPERFAMILY SSF55729 6 147 1.22E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_06680 3e4eaf6bedd57da09f1a4302c076c3cd 150 Gene3D G3DSA:3.40.630.30 5 149 3.7E-32 T 11-10-2018 ATC04_11095 07198b797e18531717a9660acedf53d9 115 TIGRFAM TIGR03462 CarR_dom_SF: lycopene cyclase domain 9 93 1.0E-15 T 11-10-2018 IPR017825 Lycopene cyclase domain GO:0016872 KEGG: 00906+2.5.1.32+5.5.1.19|MetaCyc: PWY-5943|MetaCyc: PWY-5947|MetaCyc: PWY-6279|MetaCyc: PWY-7591|MetaCyc: PWY-7938|MetaCyc: PWY-7939|MetaCyc: PWY-7947 ATC04_16485 c14f1b65a603b47623318c8591946f0d 477 Pfam PF03600 Citrate transporter 13 422 1.5E-45 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 ATC04_03640 11a6048fba40926bcffab1ce49a93b90 210 SUPERFAMILY SSF100950 35 207 8.37E-34 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ATC04_03640 11a6048fba40926bcffab1ce49a93b90 210 Pfam PF02589 LUD domain 113 207 1.4E-19 T 11-10-2018 IPR003741 LUD domain ATC04_03640 11a6048fba40926bcffab1ce49a93b90 210 Gene3D G3DSA:3.40.50.10420 33 207 3.5E-55 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ATC04_17660 27d117273a52880bb7867c5c5bcc31e7 141 Gene3D G3DSA:3.40.30.10 51 140 1.1E-13 T 11-10-2018 ATC04_12985 46a26e8adde4f3058432a6c52a2cd504 862 Gene3D G3DSA:3.40.50.12780 317 744 2.5E-64 T 11-10-2018 ATC04_12985 46a26e8adde4f3058432a6c52a2cd504 862 ProSitePatterns PS00455 Putative AMP-binding domain signature. 490 501 - T 11-10-2018 IPR020845 AMP-binding, conserved site ATC04_12985 46a26e8adde4f3058432a6c52a2cd504 862 SUPERFAMILY SSF56801 331 852 7.72E-70 T 11-10-2018 ATC04_12985 46a26e8adde4f3058432a6c52a2cd504 862 Pfam PF00501 AMP-binding enzyme 335 750 5.0E-59 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ATC04_12985 46a26e8adde4f3058432a6c52a2cd504 862 Pfam PF00561 alpha/beta hydrolase fold 53 294 1.8E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_12985 46a26e8adde4f3058432a6c52a2cd504 862 Gene3D G3DSA:3.40.50.1820 10 306 1.6E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_12985 46a26e8adde4f3058432a6c52a2cd504 862 SUPERFAMILY SSF53474 25 294 3.77E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_07365 f8ec59b6cde5452fa2d54a51d8ad70b6 239 SUPERFAMILY SSF64438 7 239 1.76E-55 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic ATC04_07365 f8ec59b6cde5452fa2d54a51d8ad70b6 239 Gene3D G3DSA:3.60.140.10 2 239 9.2E-61 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily ATC04_07365 f8ec59b6cde5452fa2d54a51d8ad70b6 239 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 237 7.9E-57 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase ATC04_14180 a3a6e293c5124e92d89f0a200190ab16 125 Pfam PF06262 Zincin-like metallopeptidase 52 105 8.2E-7 T 11-10-2018 IPR010428 Zincin-like metallopeptidase ATC04_14180 a3a6e293c5124e92d89f0a200190ab16 125 Gene3D G3DSA:3.30.2010.20 6 107 1.1E-10 T 11-10-2018 IPR038555 Zincin-like metallopeptidase superfamily ATC04_14180 a3a6e293c5124e92d89f0a200190ab16 125 SUPERFAMILY SSF55486 6 115 1.76E-16 T 11-10-2018 ATC04_11820 1c8cc9893e5b2547966f6237b661f9ab 372 Pfam PF00953 Glycosyl transferase family 4 81 241 1.6E-32 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 ATC04_11820 1c8cc9893e5b2547966f6237b661f9ab 372 ProSitePatterns PS01348 MraY family signature 2. 154 165 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATC04_01575 6b0e3635daba531e666d1647a1bac422 529 SUPERFAMILY SSF81342 287 477 3.69E-21 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ATC04_01575 6b0e3635daba531e666d1647a1bac422 529 Gene3D G3DSA:1.20.950.20 288 470 9.7E-11 T 11-10-2018 ATC04_01575 6b0e3635daba531e666d1647a1bac422 529 Pfam PF01292 Prokaryotic cytochrome b561 289 476 1.1E-10 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ATC04_10980 d381d57741ab53d20b7212237054360e 340 SUPERFAMILY SSF51735 5 321 1.1E-86 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_10980 d381d57741ab53d20b7212237054360e 340 Gene3D G3DSA:3.90.25.10 183 318 4.0E-88 T 11-10-2018 ATC04_10980 d381d57741ab53d20b7212237054360e 340 Pfam PF01370 NAD dependent epimerase/dehydratase family 14 251 4.3E-51 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ATC04_10980 d381d57741ab53d20b7212237054360e 340 Gene3D G3DSA:3.40.50.720 14 306 4.0E-88 T 11-10-2018 ATC04_10520 9bcde8f3d61d4ec82573472eae106179 455 Gene3D G3DSA:3.90.550.10 1 186 1.2E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_10520 9bcde8f3d61d4ec82573472eae106179 455 SUPERFAMILY SSF53448 1 197 7.74E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ATC04_10520 9bcde8f3d61d4ec82573472eae106179 455 Pfam PF00535 Glycosyl transferase family 2 1 117 1.9E-24 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATC04_04105 b9089aff606346a67de237b8b163edcc 540 Gene3D G3DSA:3.30.470.130 158 398 2.5E-14 T 11-10-2018 ATC04_04105 b9089aff606346a67de237b8b163edcc 540 SUPERFAMILY SSF56059 174 404 5.7E-19 T 11-10-2018 ATC04_01855 01953051fbdc5688e89c64ef07cc935f 265 PIRSF PIRSF015582 1 265 1.3E-72 T 11-10-2018 IPR011206 Citrate lyase beta subunit-like ATC04_01855 01953051fbdc5688e89c64ef07cc935f 265 SUPERFAMILY SSF51621 5 220 3.0E-63 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ATC04_01855 01953051fbdc5688e89c64ef07cc935f 265 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 208 5.0E-32 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ATC04_01855 01953051fbdc5688e89c64ef07cc935f 265 Gene3D G3DSA:3.20.20.60 2 265 6.3E-79 T 11-10-2018 ATC04_15570 298bd1203b7fb103a71e6294a0071f2a 460 Gene3D G3DSA:3.40.50.300 1 189 4.5E-19 T 11-10-2018 ATC04_07855 3efd7682491aecb610cdf3c796d92ad8 233 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 26 214 3.9E-18 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 ATC04_07855 3efd7682491aecb610cdf3c796d92ad8 233 Pfam PF04973 Nicotinamide mononucleotide transporter 24 211 1.9E-48 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 ATC04_05510 e36143231b4dcbbdd4af96411c25a7c3 707 Pfam PF05787 Bacterial protein of unknown function (DUF839) 100 647 2.9E-165 T 11-10-2018 IPR008557 Protein of unknown function DUF839 ATC04_05510 e36143231b4dcbbdd4af96411c25a7c3 707 SUPERFAMILY SSF101898 385 643 3.92E-10 T 11-10-2018 ATC04_17140 970dfe2cdd848118e5831da5e849e86d 161 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 85 154 1.2E-17 T 11-10-2018 IPR018656 Domain of unknown function DUF2087 ATC04_06400 38bba029adbc2bcf02e99a052ebd23dc 697 Pfam PF01757 Acyltransferase family 17 351 4.8E-18 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ATC04_06425 3db55c4c3f575b88604533df82859d44 448 Pfam PF14399 Butirosin biosynthesis protein H, N-terminal 106 232 1.3E-11 T 11-10-2018 IPR026935 Butirosin biosynthesis protein H, N-terminal KEGG: 00524+2.3.2.19|MetaCyc: PWY-7019 ATC04_06425 3db55c4c3f575b88604533df82859d44 448 Pfam PF16169 Domain of unknown function (DUF4872) 244 433 2.9E-27 T 11-10-2018 IPR032369 Domain of unknown function DUF4872 ATC04_02560 69c1ed9bc38c99fda6a775d04badd26f 128 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 8 120 3.9E-31 T 11-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III ATC04_14685 69c1ed9bc38c99fda6a775d04badd26f 128 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 8 120 3.9E-31 T 11-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III ATC04_17455 b615ada1c153c51616aa1e6e2c48f236 380 Pfam PF13515 Fusaric acid resistance protein-like 52 167 1.9E-7 T 11-10-2018 ATC04_09015 d6c84938c843fed7af6ce1cc4a6a9fbb 396 Gene3D G3DSA:3.40.640.10 55 292 2.7E-94 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ATC04_09015 d6c84938c843fed7af6ce1cc4a6a9fbb 396 Pfam PF00155 Aminotransferase class I and II 41 387 3.1E-45 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATC04_09015 d6c84938c843fed7af6ce1cc4a6a9fbb 396 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 237 246 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 ATC04_09015 d6c84938c843fed7af6ce1cc4a6a9fbb 396 SUPERFAMILY SSF53383 23 386 4.47E-75 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ATC04_09015 d6c84938c843fed7af6ce1cc4a6a9fbb 396 Gene3D G3DSA:3.90.1150.10 41 378 2.7E-94 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ATC04_00860 7908a1aa4d6266bd4b1597b9f5865359 201 Gene3D G3DSA:1.20.1260.10 44 200 1.8E-46 T 11-10-2018 IPR012347 Ferritin-like ATC04_00860 7908a1aa4d6266bd4b1597b9f5865359 201 Pfam PF03713 Domain of unknown function (DUF305) 56 198 5.9E-41 T 11-10-2018 IPR005183 Domain of unknown function DUF305 ATC04_02220 5be31a7aa82787a7543443867f3c2697 137 Pfam PF00872 Transposase, Mutator family 4 80 8.5E-17 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATC04_02195 92e1344404f0763dec675f5fc9982899 270 Gene3D G3DSA:1.10.1760.20 70 256 2.4E-6 T 11-10-2018 ATC04_09950 dbab1a1bcff79d7c84fd2df17c036837 581 Pfam PF12229 Putative peptidoglycan binding domain 270 336 9.5E-5 T 11-10-2018 IPR022029 Putative peptidoglycan binding domain ATC04_09950 dbab1a1bcff79d7c84fd2df17c036837 581 Pfam PF12229 Putative peptidoglycan binding domain 143 202 8.4E-6 T 11-10-2018 IPR022029 Putative peptidoglycan binding domain ATC04_09950 dbab1a1bcff79d7c84fd2df17c036837 581 Pfam PF04294 VanW like protein 378 506 1.1E-37 T 11-10-2018 IPR007391 Vancomycin resistance VanW ATC04_03055 2f852757542702b61dc71d1fe9404b2e 428 Gene3D G3DSA:3.40.50.1820 31 351 3.4E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_03055 2f852757542702b61dc71d1fe9404b2e 428 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 81 92 2.1E-9 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATC04_03055 2f852757542702b61dc71d1fe9404b2e 428 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 140 154 2.1E-9 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATC04_03055 2f852757542702b61dc71d1fe9404b2e 428 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 51 59 2.1E-9 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATC04_03055 2f852757542702b61dc71d1fe9404b2e 428 Pfam PF00561 alpha/beta hydrolase fold 49 195 1.6E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_03055 2f852757542702b61dc71d1fe9404b2e 428 SUPERFAMILY SSF53474 17 203 7.38E-24 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_17155 fbd7682d3777c8f7a7904b80f074d865 130 SUPERFAMILY SSF103473 10 107 6.02E-6 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_06970 e839ffeda0c082f38b6fed22d51a259f 221 Gene3D G3DSA:1.10.3720.10 6 221 2.1E-47 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_06970 e839ffeda0c082f38b6fed22d51a259f 221 SUPERFAMILY SSF161098 11 205 6.93E-42 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_06970 e839ffeda0c082f38b6fed22d51a259f 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 219 3.8E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ATC04_06695 ffd2595d8d9ef2df34e65946ea9b124e 253 Gene3D G3DSA:3.20.20.60 1 234 2.1E-60 T 11-10-2018 ATC04_06695 ffd2595d8d9ef2df34e65946ea9b124e 253 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 237 3.0E-52 T 11-10-2018 ATC04_06695 ffd2595d8d9ef2df34e65946ea9b124e 253 SUPERFAMILY SSF51621 4 242 2.06E-52 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ATC04_00755 91aa1c492f8199dd88c999b93006a54e 493 Pfam PF09594 Glycosyltransferase family 87 118 361 6.2E-7 T 11-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 ATC04_00755 91aa1c492f8199dd88c999b93006a54e 493 PIRSF PIRSF010361 17 467 1.3E-98 T 11-10-2018 IPR016570 Uncharacterised conserved protein UCP010361, membrane ATC04_02490 ca835e3b80109c48cf2c7b74a9f3fa70 296 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 8 218 5.9E-19 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 ATC04_14855 2ccf685e0851ab0578aad8dcac700f5f 159 Pfam PF04138 GtrA-like protein 14 145 3.9E-17 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 ATC04_15205 9793a8e84381f10f2d5053e9630ab2ef 392 Pfam PF03641 Possible lysine decarboxylase 260 377 6.5E-7 T 11-10-2018 IPR031100 LOG family ATC04_15205 9793a8e84381f10f2d5053e9630ab2ef 392 SUPERFAMILY SSF102405 160 380 5.36E-27 T 11-10-2018 ATC04_09070 0183aa0dc50e7cb258d412dfacd0ac45 234 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 3 219 3.7E-23 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ATC04_09070 0183aa0dc50e7cb258d412dfacd0ac45 234 SUPERFAMILY SSF51695 3 224 8.37E-44 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ATC04_09070 0183aa0dc50e7cb258d412dfacd0ac45 234 Gene3D G3DSA:3.20.20.190 1 229 4.9E-44 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ATC04_11290 39b40da04f47023a0e6cf10033a00a96 155 Pfam PF03963 Flagellar hook capping protein - N-terminal region 2 46 2.7E-15 T 11-10-2018 IPR005648 Flagellar hook capping protein ATC04_13055 b1c2fb88d68ccb1f1ae91189d7400b57 373 SUPERFAMILY SSF63825 40 346 1.23E-17 T 11-10-2018 ATC04_18020 9a91660c024fdaaf6c041cf4456c3860 500 Pfam PF03432 Relaxase/Mobilisation nuclease domain 118 270 1.4E-8 T 11-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 ATC04_00760 adf3764dd198ed2f5abbb92bb8aea4fc 475 SUPERFAMILY SSF51905 4 447 1.52E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00760 adf3764dd198ed2f5abbb92bb8aea4fc 475 PRINTS PR00419 Adrenodoxin reductase family signature 26 39 2.3E-7 T 11-10-2018 ATC04_00760 adf3764dd198ed2f5abbb92bb8aea4fc 475 PRINTS PR00419 Adrenodoxin reductase family signature 3 25 2.3E-7 T 11-10-2018 ATC04_00760 adf3764dd198ed2f5abbb92bb8aea4fc 475 Gene3D G3DSA:3.50.50.60 155 245 7.1E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00760 adf3764dd198ed2f5abbb92bb8aea4fc 475 Gene3D G3DSA:3.50.50.60 2 107 1.0E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_00760 adf3764dd198ed2f5abbb92bb8aea4fc 475 Pfam PF01593 Flavin containing amine oxidoreductase 13 252 2.5E-12 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 ATC04_09610 c27cab000bff1d26cd3946a4bc89da19 157 Gene3D G3DSA:2.40.50.140 91 150 5.1E-11 T 11-10-2018 ATC04_09610 c27cab000bff1d26cd3946a4bc89da19 157 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 149 1.9E-13 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain ATC04_04225 e803d2e0f2d3ad0e9b77ca95a6dc51e6 418 Gene3D G3DSA:1.20.1250.20 19 405 2.0E-34 T 11-10-2018 ATC04_04225 e803d2e0f2d3ad0e9b77ca95a6dc51e6 418 SUPERFAMILY SSF103473 27 404 7.85E-39 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_04225 e803d2e0f2d3ad0e9b77ca95a6dc51e6 418 Pfam PF07690 Major Facilitator Superfamily 31 368 2.8E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_14440 faa24af7663d59684434c5bb07a7bf63 402 Pfam PF02653 Branched-chain amino acid transport system / permease component 98 372 1.1E-43 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ATC04_08485 b1b1dc6d2ac600f49f6d795db4c1f547 169 Gene3D G3DSA:1.20.120.1630 12 152 2.6E-17 T 11-10-2018 ATC04_08485 b1b1dc6d2ac600f49f6d795db4c1f547 169 Pfam PF04191 Phospholipid methyltransferase 37 139 1.3E-11 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 ATC04_08485 b1b1dc6d2ac600f49f6d795db4c1f547 169 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 104 150 7.0E-6 T 11-10-2018 ATC04_15680 b70e3e671552b0b96e88c69cbaeb23b6 109 Gene3D G3DSA:3.40.50.300 1 91 1.0E-5 T 11-10-2018 ATC04_15680 b70e3e671552b0b96e88c69cbaeb23b6 109 Pfam PF12696 TraM recognition site of TraD and TraG 2 67 1.4E-5 T 11-10-2018 IPR032689 TraD/TraG, TraM recognition site ATC04_10950 d4692fda156d0eb66369d7d426e20546 200 SUPERFAMILY SSF53756 19 172 1.36E-13 T 11-10-2018 ATC04_10950 d4692fda156d0eb66369d7d426e20546 200 Gene3D G3DSA:3.40.50.2000 2 145 2.2E-18 T 11-10-2018 ATC04_10950 d4692fda156d0eb66369d7d426e20546 200 Pfam PF13692 Glycosyl transferases group 1 21 141 3.4E-13 T 11-10-2018 ATC04_08630 57fb1bbfd267089e183ef64434ac5605 133 Pfam PF10990 Protein of unknown function (DUF2809) 31 112 5.6E-20 T 11-10-2018 IPR021257 Protein of unknown function DUF2809 ATC04_17055 446ed0cd756d8c9865f9b5726b399804 99 Pfam PF13601 Winged helix DNA-binding domain 17 94 7.8E-27 T 11-10-2018 IPR027395 Winged helix DNA-binding domain ATC04_17055 446ed0cd756d8c9865f9b5726b399804 99 Gene3D G3DSA:1.10.10.10 7 97 8.0E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_17055 446ed0cd756d8c9865f9b5726b399804 99 SUPERFAMILY SSF46785 3 95 5.38E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_07060 b7fde622dc74d3259c643ae18fc259b1 243 Pfam PF04012 PspA/IM30 family 5 237 2.1E-39 T 11-10-2018 IPR007157 PspA/IM30 ATC04_17030 cd1fffb662394f63b29464884a8c784c 242 Pfam PF01061 ABC-2 type transporter 9 203 2.6E-31 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ATC04_17030 cd1fffb662394f63b29464884a8c784c 242 PIRSF PIRSF006648 1 242 4.4E-21 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ATC04_04525 67cbd3eabbef7c29fc82bce6c8a72254 425 Pfam PF07907 YibE/F-like protein 156 393 1.7E-68 T 11-10-2018 IPR012507 YibE/F-like ATC04_04820 8b73114a9008ec5c99b3c5ec96961aca 309 Pfam PF03547 Membrane transport protein 11 132 7.3E-12 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ATC04_04820 8b73114a9008ec5c99b3c5ec96961aca 309 Pfam PF03547 Membrane transport protein 158 301 2.2E-18 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ATC04_18275 a032997151573fea4751b04c0b906927 106 SUPERFAMILY SSF103473 1 90 1.44E-15 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_18275 a032997151573fea4751b04c0b906927 106 Gene3D G3DSA:1.20.1250.20 1 103 8.3E-15 T 11-10-2018 ATC04_18275 a032997151573fea4751b04c0b906927 106 Pfam PF07690 Major Facilitator Superfamily 1 93 5.7E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_11995 cf606c34448c7151fb767bd45504b794 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 118 1.7E-21 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ATC04_11995 cf606c34448c7151fb767bd45504b794 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 120 3.2E-26 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ATC04_11995 cf606c34448c7151fb767bd45504b794 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 123 18.81 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ATC04_13800 590645f4ba3e92f0ad1a9f42b97e56bb 149 SUPERFAMILY SSF55961 5 133 9.49E-17 T 11-10-2018 ATC04_13800 590645f4ba3e92f0ad1a9f42b97e56bb 149 Gene3D G3DSA:3.30.530.20 17 130 3.3E-12 T 11-10-2018 IPR023393 START-like domain superfamily ATC04_08310 81ba1fe5ee735ff102ad804d46709af1 252 SMART SM00382 32 226 0.0019 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_08310 81ba1fe5ee735ff102ad804d46709af1 252 Gene3D G3DSA:3.40.50.300 1 247 5.7E-53 T 11-10-2018 ATC04_08310 81ba1fe5ee735ff102ad804d46709af1 252 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 246 8.8E-102 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 ATC04_08310 81ba1fe5ee735ff102ad804d46709af1 252 SUPERFAMILY SSF52540 4 234 3.22E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_08310 81ba1fe5ee735ff102ad804d46709af1 252 Pfam PF00005 ABC transporter 23 174 6.0E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_08100 24cb40f2aaf00d12705ee7157e577612 341 Pfam PF01400 Astacin (Peptidase family M12A) 38 199 5.0E-9 T 11-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 ATC04_08100 24cb40f2aaf00d12705ee7157e577612 341 SMART SM00235 34 183 1.8E-5 T 11-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 ATC04_08100 24cb40f2aaf00d12705ee7157e577612 341 SUPERFAMILY SSF55486 33 235 7.57E-28 T 11-10-2018 ATC04_08100 24cb40f2aaf00d12705ee7157e577612 341 Gene3D G3DSA:3.40.390.10 31 238 1.4E-26 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 ATC04_15370 11f961ce94bdf769f6a107bb214069ce 316 PIRSF PIRSF016660 1 311 5.4E-107 T 11-10-2018 IPR008526 Inner membrane protein YedI ATC04_15370 11f961ce94bdf769f6a107bb214069ce 316 Pfam PF05661 Protein of unknown function (DUF808) 4 298 1.4E-119 T 11-10-2018 IPR008526 Inner membrane protein YedI ATC04_06900 05e4754829a514dc06fb660ff049b86d 488 SMART SM00955 53 370 9.0E-48 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 ATC04_06900 05e4754829a514dc06fb660ff049b86d 488 Pfam PF00773 RNB domain 57 360 4.3E-40 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 ATC04_06900 05e4754829a514dc06fb660ff049b86d 488 SUPERFAMILY SSF50249 24 413 2.8E-80 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_13365 af0e6404315fb56313e251fe03914668 158 Pfam PF01551 Peptidase family M23 50 142 3.2E-14 T 11-10-2018 IPR016047 Peptidase M23 ATC04_13365 af0e6404315fb56313e251fe03914668 158 Gene3D G3DSA:2.70.70.10 7 146 1.6E-19 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_13365 af0e6404315fb56313e251fe03914668 158 SUPERFAMILY SSF51261 20 145 4.24E-15 T 11-10-2018 IPR011055 Duplicated hybrid motif ATC04_07530 2c3f8f11bf284abe90fc7543f16c44f6 123 Gene3D G3DSA:1.10.10.10 1 72 5.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_07530 2c3f8f11bf284abe90fc7543f16c44f6 123 Pfam PF03965 Penicillinase repressor 4 118 4.5E-20 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 ATC04_07530 2c3f8f11bf284abe90fc7543f16c44f6 123 SUPERFAMILY SSF46785 3 120 4.62E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03925 b94b1dfd3e2f7115a194c5f7c30c3b00 437 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 245 276 - T 11-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 ATC04_03925 b94b1dfd3e2f7115a194c5f7c30c3b00 437 SUPERFAMILY SSF54826 4 138 1.35E-40 T 11-10-2018 ATC04_03925 b94b1dfd3e2f7115a194c5f7c30c3b00 437 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 34 136 2.0E-10 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ATC04_03925 b94b1dfd3e2f7115a194c5f7c30c3b00 437 Gene3D G3DSA:3.30.390.10 1 131 6.5E-53 T 11-10-2018 IPR029017 Enolase-like, N-terminal ATC04_03925 b94b1dfd3e2f7115a194c5f7c30c3b00 437 SMART SM00922 199 295 8.0E-25 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ATC04_03925 b94b1dfd3e2f7115a194c5f7c30c3b00 437 SUPERFAMILY SSF51604 184 425 4.45E-67 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ATC04_03925 b94b1dfd3e2f7115a194c5f7c30c3b00 437 Gene3D G3DSA:3.20.20.120 132 434 9.5E-107 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ATC04_03925 b94b1dfd3e2f7115a194c5f7c30c3b00 437 Pfam PF13378 Enolase C-terminal domain-like 204 415 4.2E-60 T 11-10-2018 IPR029065 Enolase C-terminal domain-like ATC04_08390 e2bb658f887869d1b28a062f67cb0679 167 Gene3D G3DSA:2.30.110.10 1 158 5.7E-36 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ATC04_08390 e2bb658f887869d1b28a062f67cb0679 167 SMART SM00903 12 156 1.2E-23 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ATC04_08390 e2bb658f887869d1b28a062f67cb0679 167 Pfam PF01613 Flavin reductase like domain 13 157 9.0E-25 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ATC04_08390 e2bb658f887869d1b28a062f67cb0679 167 SUPERFAMILY SSF50475 6 157 8.97E-30 T 11-10-2018 ATC04_10390 51432975a6e451c88ccb568d048a8b81 136 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATC04_10390 51432975a6e451c88ccb568d048a8b81 136 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 24.269 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_10390 51432975a6e451c88ccb568d048a8b81 136 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 7.0E-33 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_10390 51432975a6e451c88ccb568d048a8b81 136 Gene3D G3DSA:3.30.1320.10 1 107 9.9E-32 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_10390 51432975a6e451c88ccb568d048a8b81 136 Pfam PF00886 Ribosomal protein S16 9 67 1.3E-24 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_10390 51432975a6e451c88ccb568d048a8b81 136 SUPERFAMILY SSF54565 2 93 8.89E-35 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATC04_05720 cf6bb4ff2631d8cd87df0dff1267a893 100 SUPERFAMILY SSF103084 20 78 2.22E-5 T 11-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 ATC04_09575 c8478e0648c46f2a14ae71665224d723 330 Gene3D G3DSA:1.20.1530.20 2 312 2.4E-30 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily ATC04_09575 c8478e0648c46f2a14ae71665224d723 330 Pfam PF01758 Sodium Bile acid symporter family 44 221 3.4E-12 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ATC04_01095 a0f3a010bc23f9b5ae8131607edc5e77 454 Pfam PF13520 Amino acid permease 31 410 4.5E-39 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_01095 a0f3a010bc23f9b5ae8131607edc5e77 454 PIRSF PIRSF006060 9 450 5.6E-69 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_01095 a0f3a010bc23f9b5ae8131607edc5e77 454 Gene3D G3DSA:1.20.1740.10 17 450 1.9E-80 T 11-10-2018 ATC04_06845 8184857842a71c827f7bae3f12909cee 219 Pfam PF01596 O-methyltransferase 27 210 6.9E-12 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 ATC04_06845 8184857842a71c827f7bae3f12909cee 219 Gene3D G3DSA:3.40.50.150 10 212 1.6E-42 T 11-10-2018 ATC04_06845 8184857842a71c827f7bae3f12909cee 219 SUPERFAMILY SSF53335 35 210 5.31E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_10020 080342812483d02b9e87d0889eeed0e2 480 Pfam PF09852 Predicted membrane protein (DUF2079) 27 409 1.2E-53 T 11-10-2018 IPR018650 Sulfolobus virus STSV1, Orf64 ATC04_02695 7ad14ac18f7469676107c42e37a709ea 285 SUPERFAMILY SSF56281 80 264 4.06E-19 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_02695 7ad14ac18f7469676107c42e37a709ea 285 Gene3D G3DSA:3.60.15.10 53 263 4.9E-10 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ATC04_02695 7ad14ac18f7469676107c42e37a709ea 285 SMART SM00849 86 254 2.9E-4 T 11-10-2018 IPR001279 Metallo-beta-lactamase ATC04_08920 1c34aea0fe0eea2e089096191dfb56a1 241 Gene3D G3DSA:3.90.1680.10 1 236 1.2E-67 T 11-10-2018 IPR036590 SOS response associated peptidase-like ATC04_08920 1c34aea0fe0eea2e089096191dfb56a1 241 SUPERFAMILY SSF143081 2 236 2.88E-61 T 11-10-2018 IPR036590 SOS response associated peptidase-like ATC04_08920 1c34aea0fe0eea2e089096191dfb56a1 241 Pfam PF02586 SOS response associated peptidase (SRAP) 1 226 1.3E-61 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) ATC04_05995 4a614e6daa02862ba9541fb7caf1b5c2 473 Pfam PF04024 PspC domain 23 74 5.0E-14 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal ATC04_18115 a98b5fbf7a293a60398a0d86cf531b70 660 SMART SM00487 25 220 0.0033 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATC04_18115 a98b5fbf7a293a60398a0d86cf531b70 660 Gene3D G3DSA:3.40.50.300 241 421 5.9E-11 T 11-10-2018 ATC04_18115 a98b5fbf7a293a60398a0d86cf531b70 660 SUPERFAMILY SSF52540 41 391 5.67E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_18115 a98b5fbf7a293a60398a0d86cf531b70 660 Pfam PF00271 Helicase conserved C-terminal domain 311 384 2.2E-4 T 11-10-2018 IPR001650 Helicase, C-terminal ATC04_18115 a98b5fbf7a293a60398a0d86cf531b70 660 Gene3D G3DSA:3.40.50.300 18 207 1.1E-9 T 11-10-2018 ATC04_00300 f44ce7ad5757826809f0e2d1874db53c 484 Pfam PF02720 Domain of unknown function (DUF222) 45 310 1.9E-11 T 11-10-2018 IPR003870 Domain of unknown function DUF222 ATC04_11355 01b176f1d658e459675b9e0cda5ea84a 423 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 183 405 6.1E-32 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 ATC04_11355 01b176f1d658e459675b9e0cda5ea84a 423 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 1 94 7.5E-14 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 ATC04_02095 10321a305936dffec11c7aebef9d5d8c 257 Pfam PF07510 Protein of unknown function (DUF1524) 112 246 3.8E-16 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 ATC04_16505 42871669af526452a7036391048ca80f 525 Pfam PF00999 Sodium/hydrogen exchanger family 9 397 3.4E-46 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ATC04_13380 0f3cadaa700f4e6b63d472ff7d9ae565 306 SUPERFAMILY SSF103481 196 274 3.92E-6 T 11-10-2018 ATC04_13380 0f3cadaa700f4e6b63d472ff7d9ae565 306 Pfam PF05653 Magnesium transporter NIPA 49 163 1.4E-9 T 11-10-2018 IPR008521 Magnesium transporter NIPA GO:0015095|GO:0015693|GO:0016021 Reactome: R-HSA-5223345 ATC04_13825 708d856eeab42e7f7c16b80381a9bc70 319 Pfam PF13672 Protein phosphatase 2C 23 263 8.6E-12 T 11-10-2018 ATC04_13825 708d856eeab42e7f7c16b80381a9bc70 319 SMART SM00332 9 301 1.4E-17 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ATC04_13825 708d856eeab42e7f7c16b80381a9bc70 319 SUPERFAMILY SSF81606 12 303 6.54E-56 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ATC04_13825 708d856eeab42e7f7c16b80381a9bc70 319 SMART SM00331 18 303 2.9E-23 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ATC04_16405 ca3305c39114a0a37110c620240ec9b8 100 PIRSF PIRSF006909 1 100 3.0E-48 T 11-10-2018 IPR014447 Uncharacterised conserved protein UCP006909 ATC04_03005 537d3bdcc4e1cc475951893f5606a98d 170 SUPERFAMILY SSF46785 83 163 1.41E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_03005 537d3bdcc4e1cc475951893f5606a98d 170 Gene3D G3DSA:1.10.10.10 81 165 1.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_03005 537d3bdcc4e1cc475951893f5606a98d 170 Pfam PF11625 Protein of unknown function (DUF3253) 85 161 1.6E-25 T 11-10-2018 IPR021660 Protein of unknown function DUF3253 ATC04_06440 bc23232e6f4547486c0d62603c3817d3 165 Pfam PF12823 Domain of unknown function (DUF3817) 36 149 1.6E-28 T 11-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane ATC04_06440 bc23232e6f4547486c0d62603c3817d3 165 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 100 147 8.9E-14 T 11-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane ATC04_10565 e6af213cddeda8c00b8635fb9bff5bf2 76 Pfam PF01695 IstB-like ATP binding protein 2 43 6.6E-6 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 ATC04_15875 1670958ca88483bb25cb594e217a2cc4 86 Pfam PF04226 Transglycosylase associated protein 34 83 7.3E-7 T 11-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 ATC04_11175 cfcbb3602feb38362cbd77d848de0060 310 SUPERFAMILY SSF51735 99 277 4.34E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_11175 cfcbb3602feb38362cbd77d848de0060 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 276 2.6E-44 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ATC04_11175 cfcbb3602feb38362cbd77d848de0060 310 Gene3D G3DSA:3.40.50.720 97 283 3.4E-65 T 11-10-2018 ATC04_11175 cfcbb3602feb38362cbd77d848de0060 310 Gene3D G3DSA:3.40.50.720 33 308 3.4E-65 T 11-10-2018 ATC04_10240 67b5832b2fe72a11b79ccefbd95a246e 317 Pfam PF07510 Protein of unknown function (DUF1524) 106 240 3.9E-15 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 ATC04_02865 2daa16173393ac4e6c40fa20ca44959c 239 SUPERFAMILY SSF52540 43 203 2.93E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_02865 2daa16173393ac4e6c40fa20ca44959c 239 SMART SM00382 43 211 7.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_02865 2daa16173393ac4e6c40fa20ca44959c 239 Gene3D G3DSA:3.40.50.300 40 217 1.1E-11 T 11-10-2018 ATC04_02865 2daa16173393ac4e6c40fa20ca44959c 239 Pfam PF13476 AAA domain 45 67 8.2E-7 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain ATC04_16245 82b66a1b1c1d9356d2664c7c1631c5e5 162 Pfam PF16571 FBP C-terminal treble-clef zinc-finger 9 162 2.3E-54 T 11-10-2018 IPR032330 Elongation factor G-binding protein, C-terminal treble-clef zinc-finger ATC04_15645 3f4cdc6b029445ce4f06aa2bcaf260b6 275 Gene3D G3DSA:1.10.150.130 2 98 8.7E-9 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal ATC04_15645 3f4cdc6b029445ce4f06aa2bcaf260b6 275 Pfam PF00589 Phage integrase family 122 256 8.5E-25 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATC04_15645 3f4cdc6b029445ce4f06aa2bcaf260b6 275 Gene3D G3DSA:1.10.443.10 99 274 3.7E-33 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ATC04_15645 3f4cdc6b029445ce4f06aa2bcaf260b6 275 SUPERFAMILY SSF56349 7 264 1.18E-41 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATC04_02025 025e3f5402c13679535af8b9ad712464 267 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 28 251 2.3E-53 T 11-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related ATC04_13520 dc74099a53efec9287e2ad4dbbf0ecff 217 Gene3D G3DSA:3.40.50.1820 14 210 1.3E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_13520 dc74099a53efec9287e2ad4dbbf0ecff 217 SUPERFAMILY SSF53474 21 210 3.94E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_13520 dc74099a53efec9287e2ad4dbbf0ecff 217 Pfam PF02230 Phospholipase/Carboxylesterase 22 209 1.1E-13 T 11-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 ATC04_01715 b01e99e0305bd70592f8780bb9baffd3 501 Pfam PF13556 PucR C-terminal helix-turn-helix domain 439 494 7.4E-13 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ATC04_01715 b01e99e0305bd70592f8780bb9baffd3 501 Pfam PF07905 Purine catabolism regulatory protein-like family 8 130 7.5E-22 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain ATC04_01715 b01e99e0305bd70592f8780bb9baffd3 501 Gene3D G3DSA:1.10.10.2840 370 501 4.4E-15 T 11-10-2018 ATC04_08010 56683f662928ed8f6e0a959a87abaf12 262 Pfam PF02585 GlcNAc-PI de-N-acetylase 9 141 9.8E-23 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 ATC04_08010 56683f662928ed8f6e0a959a87abaf12 262 Gene3D G3DSA:3.40.50.10320 1 239 5.3E-32 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ATC04_08010 56683f662928ed8f6e0a959a87abaf12 262 SUPERFAMILY SSF102588 5 230 3.01E-36 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ATC04_14285 83b024b55888a4bc0c90cfdb79e6ab94 191 Pfam PF01478 Type IV leader peptidase family 52 158 5.1E-13 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 ATC04_14740 92bc479c3901934b04e71d938d1b851a 418 Pfam PF03806 AbgT putative transporter family 1 416 3.1E-107 T 11-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 ATC04_16105 07f47a85f5f908243470e358cae9a6a3 225 Pfam PF02517 CAAX protease self-immunity 86 174 3.9E-6 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 ATC04_12450 bb041db67d7bbf8c9e212e8cbc7a3120 246 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 16 148 4.9E-16 T 11-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 ATC04_12450 bb041db67d7bbf8c9e212e8cbc7a3120 246 Gene3D G3DSA:1.20.120.450 6 152 6.7E-22 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_12450 bb041db67d7bbf8c9e212e8cbc7a3120 246 SUPERFAMILY SSF55718 158 223 3.88E-7 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily ATC04_12450 bb041db67d7bbf8c9e212e8cbc7a3120 246 SUPERFAMILY SSF109854 4 150 2.29E-21 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_12450 bb041db67d7bbf8c9e212e8cbc7a3120 246 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 14 215 7.0E-21 T 11-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type ATC04_00855 5554d732b4f4be5307600b0e10f05887 191 Gene3D G3DSA:2.60.40.3700 26 190 1.3E-56 T 11-10-2018 ATC04_02260 d52efb771ff9444a7266e07d32df12e4 279 Pfam PF13683 Integrase core domain 198 263 2.3E-22 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ATC04_02260 d52efb771ff9444a7266e07d32df12e4 279 Pfam PF13276 HTH-like domain 36 94 5.5E-10 T 11-10-2018 IPR025948 HTH-like domain ATC04_02260 d52efb771ff9444a7266e07d32df12e4 279 Gene3D G3DSA:3.30.420.10 105 275 3.4E-15 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ATC04_02260 d52efb771ff9444a7266e07d32df12e4 279 SUPERFAMILY SSF53098 112 269 1.52E-32 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ATC04_02960 1e421220d0d0c73b4d0288337eba9afe 375 Gene3D G3DSA:2.60.40.10 241 359 6.2E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold ATC04_02960 1e421220d0d0c73b4d0288337eba9afe 375 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 30 135 1.6E-14 T 11-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 ATC04_08625 6a1ada36cb90b3094d75731777c25218 196 Pfam PF13302 Acetyltransferase (GNAT) domain 24 163 2.7E-18 T 11-10-2018 IPR000182 GNAT domain ATC04_08625 6a1ada36cb90b3094d75731777c25218 196 SUPERFAMILY SSF55729 18 187 4.66E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_08625 6a1ada36cb90b3094d75731777c25218 196 Gene3D G3DSA:3.40.630.30 19 190 3.9E-39 T 11-10-2018 ATC04_02905 04337fd589362b5cd80001e4543e3a58 161 SUPERFAMILY SSF55144 21 147 1.6E-10 T 11-10-2018 IPR009097 Cyclic phosphodiesterase ATC04_02905 04337fd589362b5cd80001e4543e3a58 161 Pfam PF13563 2'-5' RNA ligase superfamily 21 127 2.3E-9 T 11-10-2018 ATC04_02905 04337fd589362b5cd80001e4543e3a58 161 Gene3D G3DSA:3.90.1140.10 6 155 1.1E-9 T 11-10-2018 ATC04_04885 461b1cf332303c87a16458a28b348b77 135 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 100 9.5E-23 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 ATC04_04885 461b1cf332303c87a16458a28b348b77 135 Pfam PF03334 Na+/H+ antiporter subunit 12 91 1.1E-24 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 ATC04_03920 fab0fd1de34f9eb601c4cea6496de365 296 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 85 288 7.0E-59 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ATC04_03920 fab0fd1de34f9eb601c4cea6496de365 296 SUPERFAMILY SSF56529 78 290 1.03E-65 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_03920 fab0fd1de34f9eb601c4cea6496de365 296 Gene3D G3DSA:3.90.850.10 80 295 3.6E-70 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ATC04_10505 97e388908f844ed6b245366e7d377da4 225 Pfam PF01757 Acyltransferase family 13 165 3.8E-12 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ATC04_06720 93c13a2dba80924745e943fcb58437c3 154 SUPERFAMILY SSF55729 11 133 1.1E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_06720 93c13a2dba80924745e943fcb58437c3 154 Gene3D G3DSA:3.40.630.30 7 148 1.0E-18 T 11-10-2018 ATC04_06720 93c13a2dba80924745e943fcb58437c3 154 Pfam PF13673 Acetyltransferase (GNAT) domain 51 134 8.4E-8 T 11-10-2018 IPR000182 GNAT domain ATC04_09555 397b267bdd592bf073b4ebcbb7075580 93 Pfam PF01037 Lrp/AsnC ligand binding domain 6 76 6.2E-16 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATC04_09555 397b267bdd592bf073b4ebcbb7075580 93 SUPERFAMILY SSF54909 1 78 6.65E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ATC04_09555 397b267bdd592bf073b4ebcbb7075580 93 Gene3D G3DSA:3.30.70.920 1 74 1.0E-21 T 11-10-2018 ATC04_03950 592a1a0c5dee77b225c322d7012bb040 313 Pfam PF02653 Branched-chain amino acid transport system / permease component 30 299 2.9E-50 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ATC04_07590 07a756f3c0973f43584411032524da59 254 Pfam PF12502 Protein of unknown function (DUF3710) 49 223 1.7E-57 T 11-10-2018 IPR022183 Protein of unknown function DUF3710 ATC04_05495 de0e07ac5952df5dc0e314db60bbc37d 318 Pfam PF11292 Protein of unknown function (DUF3093) 165 239 1.2E-5 T 11-10-2018 IPR021443 Protein of unknown function DUF3093 ATC04_12655 3fef9ad4bb8d30330322ae8580c12c08 154 Gene3D G3DSA:1.10.10.10 44 89 1.1E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_12655 3fef9ad4bb8d30330322ae8580c12c08 154 Pfam PF02631 RecX family 21 141 5.0E-27 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 ATC04_12655 3fef9ad4bb8d30330322ae8580c12c08 154 Hamap MF_01114 Regulatory protein RecX [recX]. 1 146 12.471 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 ATC04_11990 a44ca9a0bec26f00c7b57d7588ebc584 138 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 120 3.3E-18 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ATC04_11990 a44ca9a0bec26f00c7b57d7588ebc584 138 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 125 17.037 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ATC04_15200 a1872aba06b8dce4e538bb029b8414d9 367 Pfam PF01988 VIT family 141 359 3.2E-57 T 11-10-2018 IPR008217 Ccc1 family ATC04_09410 bbdf99c73e203ab2e7414f93ac1e84d6 135 Pfam PF09685 Domain of unknown function (DUF4870) 31 133 1.3E-23 T 11-10-2018 IPR019109 Protein of unknown function DUF4870 ATC04_01765 3e71eb0d9529ea18e65086696b2e9584 462 Pfam PF07690 Major Facilitator Superfamily 29 381 9.3E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_01765 3e71eb0d9529ea18e65086696b2e9584 462 Gene3D G3DSA:1.20.1250.20 19 443 9.6E-25 T 11-10-2018 ATC04_01765 3e71eb0d9529ea18e65086696b2e9584 462 SUPERFAMILY SSF103473 23 442 9.68E-29 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_16020 01df2fe375e000b08fb2ae4b15c99b59 183 Gene3D G3DSA:1.10.357.10 3 180 7.0E-25 T 11-10-2018 ATC04_16020 01df2fe375e000b08fb2ae4b15c99b59 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 52 6.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATC04_16020 01df2fe375e000b08fb2ae4b15c99b59 183 SUPERFAMILY SSF46689 5 68 6.31E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ATC04_10755 d95a0bd4ea129cf674ea4cb1ad2f2cd6 406 Pfam PF07730 Histidine kinase 203 269 2.0E-18 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ATC04_10755 d95a0bd4ea129cf674ea4cb1ad2f2cd6 406 Gene3D G3DSA:3.30.565.10 278 404 6.7E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_10755 d95a0bd4ea129cf674ea4cb1ad2f2cd6 406 SUPERFAMILY SSF55874 312 403 3.46E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ATC04_10200 1a9b2ba69664fc82179bc06861143acc 128 Pfam PF06993 Protein of unknown function (DUF1304) 12 122 4.4E-32 T 11-10-2018 IPR009732 Protein of unknown function DUF1304 ATC04_15355 6b91319934513867eb6bb152fef52fa8 231 Pfam PF00583 Acetyltransferase (GNAT) family 49 103 3.9E-5 T 11-10-2018 IPR000182 GNAT domain ATC04_15355 6b91319934513867eb6bb152fef52fa8 231 SUPERFAMILY SSF55729 7 104 1.61E-9 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_15355 6b91319934513867eb6bb152fef52fa8 231 Gene3D G3DSA:3.40.630.30 5 104 1.2E-7 T 11-10-2018 ATC04_11030 d2c613e46edb32718430ec520670406a 232 Pfam PF08241 Methyltransferase domain 45 138 1.7E-20 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ATC04_11030 d2c613e46edb32718430ec520670406a 232 Gene3D G3DSA:3.40.50.150 2 216 2.1E-48 T 11-10-2018 ATC04_11030 d2c613e46edb32718430ec520670406a 232 SUPERFAMILY SSF53335 4 206 2.28E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_11235 d9cfef63dd36ff86b0f5853dbeb05733 363 SUPERFAMILY SSF160544 239 345 2.62E-34 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ATC04_11235 d9cfef63dd36ff86b0f5853dbeb05733 363 Gene3D G3DSA:3.40.1690.10 212 351 1.2E-48 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ATC04_11235 d9cfef63dd36ff86b0f5853dbeb05733 363 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 341 1.4E-94 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATC04_11235 d9cfef63dd36ff86b0f5853dbeb05733 363 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 9.6E-26 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATC04_11235 d9cfef63dd36ff86b0f5853dbeb05733 363 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 223 240 9.6E-26 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATC04_11235 d9cfef63dd36ff86b0f5853dbeb05733 363 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 267 282 9.6E-26 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATC04_11235 d9cfef63dd36ff86b0f5853dbeb05733 363 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 9.6E-26 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATC04_11235 d9cfef63dd36ff86b0f5853dbeb05733 363 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 203 221 9.6E-26 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATC04_02850 b2f4c1ab2accfb6d418be93fba0d0349 256 Pfam PF10979 Protein of unknown function (DUF2786) 10 47 4.7E-14 T 11-10-2018 IPR024498 Domain of unknown function DUF2786 ATC04_02850 b2f4c1ab2accfb6d418be93fba0d0349 256 ProDom PD120223 SCO3432 GENE ML2604 GP79 GP77 CGL2230 MB0190 14 224 4.0E-9 T 11-10-2018 ATC04_06865 f37b7336c0cfe79d4e7913f524af1971 200 Pfam PF06210 Protein of unknown function (DUF1003) 42 146 5.3E-34 T 11-10-2018 IPR010406 Protein of unknown function DUF1003 ATC04_06365 4560cf6687c85245a83cacc9746187c4 413 Gene3D G3DSA:3.40.50.150 95 269 4.7E-36 T 11-10-2018 ATC04_06365 4560cf6687c85245a83cacc9746187c4 413 SUPERFAMILY SSF53335 61 241 4.4E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATC04_03245 67cdd362eeb23770be0b797e14c79f72 379 Pfam PF00676 Dehydrogenase E1 component 46 327 2.3E-68 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ATC04_03245 67cdd362eeb23770be0b797e14c79f72 379 SUPERFAMILY SSF52518 29 366 1.26E-94 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ATC04_03245 67cdd362eeb23770be0b797e14c79f72 379 Gene3D G3DSA:3.40.50.970 2 363 8.3E-110 T 11-10-2018 ATC04_07995 3d6f5d897f9e01fa2792fdbd5e254b2b 209 SUPERFAMILY SSF88713 6 207 7.17E-25 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ATC04_07995 3d6f5d897f9e01fa2792fdbd5e254b2b 209 Gene3D G3DSA:3.20.20.370 5 209 9.1E-24 T 11-10-2018 ATC04_07995 3d6f5d897f9e01fa2792fdbd5e254b2b 209 Pfam PF01522 Polysaccharide deacetylase 6 141 1.2E-18 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ATC04_01105 935684ef1b8751fd463196b4e171be34 295 Gene3D G3DSA:3.40.1090.10 2 71 1.6E-6 T 11-10-2018 ATC04_01105 935684ef1b8751fd463196b4e171be34 295 Gene3D G3DSA:3.40.1090.10 136 237 3.8E-5 T 11-10-2018 ATC04_01105 935684ef1b8751fd463196b4e171be34 295 SUPERFAMILY SSF52151 7 220 3.14E-21 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ATC04_17990 64deb4864f0d734a799a9469c2b0133b 543 SUPERFAMILY SSF52540 101 438 6.53E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_17990 64deb4864f0d734a799a9469c2b0133b 543 Gene3D G3DSA:3.40.50.300 308 536 4.4E-18 T 11-10-2018 ATC04_17670 f8abcc02c5739d77e8a727d9979fb015 113 Pfam PF02467 Transcription factor WhiB 23 90 4.3E-12 T 11-10-2018 IPR034768 WhiB-like iron-sulfur binding domain ATC04_12590 a2cf9dd6c9cd6177c1e96b516ecfe2b7 293 Pfam PF07179 SseB protein N-terminal domain 64 184 8.9E-30 T 11-10-2018 IPR009839 SseB protein N-terminal domain ATC04_18430 3f7b7c176d904697d01c1f932b3bdff6 121 Pfam PF00436 Single-strand binding protein family 3 104 9.5E-14 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 ATC04_18430 3f7b7c176d904697d01c1f932b3bdff6 121 SUPERFAMILY SSF50249 3 117 4.9E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ATC04_18430 3f7b7c176d904697d01c1f932b3bdff6 121 Gene3D G3DSA:2.40.50.140 2 116 1.6E-18 T 11-10-2018 ATC04_08770 5b213878735d7ae5020bf1f5371d667c 211 SUPERFAMILY SSF141571 43 199 1.29E-12 T 11-10-2018 ATC04_08770 5b213878735d7ae5020bf1f5371d667c 211 Gene3D G3DSA:2.160.20.100 24 210 4.7E-18 T 11-10-2018 ATC04_07580 b33aa64af89d5cbb0d9cf5128e36f418 176 Pfam PF11292 Protein of unknown function (DUF3093) 13 150 2.4E-40 T 11-10-2018 IPR021443 Protein of unknown function DUF3093 ATC04_01445 4c13993485a3ee3d8e222cad68392b2f 283 SUPERFAMILY SSF52096 6 259 1.11E-63 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ATC04_01445 4c13993485a3ee3d8e222cad68392b2f 283 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 257 4.1E-35 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ATC04_01445 4c13993485a3ee3d8e222cad68392b2f 283 Gene3D G3DSA:3.90.226.10 8 280 4.7E-83 T 11-10-2018 ATC04_10770 b7ac462e7235fe11cfe15a981bed4403 336 Gene3D G3DSA:3.40.50.1010 3 174 1.7E-7 T 11-10-2018 ATC04_10770 b7ac462e7235fe11cfe15a981bed4403 336 Pfam PF01936 NYN domain 5 149 1.7E-11 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type ATC04_00595 dc05943f8a91a785d7e48b4cb2149de0 289 SUPERFAMILY SSF103481 39 135 1.16E-6 T 11-10-2018 ATC04_00595 dc05943f8a91a785d7e48b4cb2149de0 289 SUPERFAMILY SSF103481 183 282 3.79E-10 T 11-10-2018 ATC04_00595 dc05943f8a91a785d7e48b4cb2149de0 289 Pfam PF00892 EamA-like transporter family 145 279 5.1E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ATC04_00595 dc05943f8a91a785d7e48b4cb2149de0 289 Pfam PF00892 EamA-like transporter family 4 133 8.8E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ATC04_11315 6d38981f156c854b53bbbf24710768c3 193 Pfam PF02108 Flagellar assembly protein FliH 59 182 4.7E-8 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE ATC04_01705 c5c862e7af63c9aab67a040f981ca68b 563 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 31 519 6.1E-141 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ATC04_04595 e956476af82ef3af9c722135b8ab999c 324 Pfam PF01545 Cation efflux family 34 227 1.7E-22 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ATC04_04595 e956476af82ef3af9c722135b8ab999c 324 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 34 277 2.7E-26 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ATC04_04595 e956476af82ef3af9c722135b8ab999c 324 SUPERFAMILY SSF161111 26 228 1.24E-32 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ATC04_04595 e956476af82ef3af9c722135b8ab999c 324 Gene3D G3DSA:1.20.1510.10 19 227 7.4E-27 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ATC04_15965 94d761e18365341883bc2f572028e6e8 178 Pfam PF04978 Protein of unknown function (DUF664) 14 173 4.2E-43 T 11-10-2018 IPR007061 Protein of unknown function DUF664 ATC04_15965 94d761e18365341883bc2f572028e6e8 178 SUPERFAMILY SSF109854 8 172 2.59E-34 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_15965 94d761e18365341883bc2f572028e6e8 178 Gene3D G3DSA:1.20.120.450 1 175 2.0E-36 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_06705 3775ce8e6aff28fd57433b26b4f10e4e 168 SUPERFAMILY SSF109854 21 160 3.4E-17 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_06705 3775ce8e6aff28fd57433b26b4f10e4e 168 Gene3D G3DSA:1.20.120.450 1 165 2.4E-49 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ATC04_06705 3775ce8e6aff28fd57433b26b4f10e4e 168 Pfam PF12867 DinB superfamily 23 130 2.0E-8 T 11-10-2018 IPR024775 DinB-like domain ATC04_03870 e3be54cfe4df0032124a6acefaec8aa5 281 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 20 244 6.1E-43 T 11-10-2018 IPR018713 Domain of unknown function DUF2236 ATC04_02785 b7acf249ac6b78348568a1cc37f99611 352 Pfam PF13515 Fusaric acid resistance protein-like 202 326 1.3E-17 T 11-10-2018 ATC04_03080 e59a9bdf72ad30b4c6bf58334c191389 241 Pfam PF09335 SNARE associated Golgi protein 63 189 3.9E-23 T 11-10-2018 IPR032816 SNARE associated Golgi protein ATC04_04385 e4150f69641bf7c705b79535ff40a38c 211 Pfam PF09588 YqaJ-like viral recombinase domain 21 145 1.0E-7 T 11-10-2018 IPR019080 YqaJ viral recombinase ATC04_04385 e4150f69641bf7c705b79535ff40a38c 211 SUPERFAMILY SSF52980 11 192 5.9E-20 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ATC04_04385 e4150f69641bf7c705b79535ff40a38c 211 Gene3D G3DSA:3.90.320.10 16 206 1.4E-25 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal ATC04_18055 677692904ca59b0508c7fa982eec6149 200 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 9 197 5.8E-54 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ATC04_18055 677692904ca59b0508c7fa982eec6149 200 PIRSF PIRSF001296 7 200 1.0E-65 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ATC04_18055 677692904ca59b0508c7fa982eec6149 200 Pfam PF02669 K+-transporting ATPase, c chain 12 196 4.6E-66 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ATC04_18055 677692904ca59b0508c7fa982eec6149 200 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 8 198 32.721 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ATC04_06415 201fe2f93483d5037b503733f36a0561 156 Pfam PF04892 VanZ like family 25 142 1.5E-16 T 11-10-2018 IPR006976 VanZ-like ATC04_15495 cf683471cdc00f0758d414934af77848 100 Pfam PF13834 Domain of unknown function (DUF4193) 2 99 5.2E-33 T 11-10-2018 IPR025242 Protein of unknown function DUF4193 ATC04_00805 8dd45fe7094d43b228d67af6621d40cd 182 Gene3D G3DSA:3.20.90.20 4 180 5.1E-8 T 11-10-2018 IPR038595 LURP-one-related superfamily ATC04_00805 8dd45fe7094d43b228d67af6621d40cd 182 SUPERFAMILY SSF54518 9 175 2.14E-21 T 11-10-2018 IPR025659 Tubby-like, C-terminal ATC04_00805 8dd45fe7094d43b228d67af6621d40cd 182 Pfam PF03803 Scramblase 19 174 1.6E-8 T 11-10-2018 IPR005552 Scramblase ATC04_05765 d2a4ec0a5ef0afea9a1b5726b05d2a3b 476 Gene3D G3DSA:3.40.50.300 3 192 1.0E-19 T 11-10-2018 ATC04_07510 a15ec13e9f145066baee169448ad446d 367 Pfam PF13830 Domain of unknown function (DUF4192) 17 352 7.8E-31 T 11-10-2018 IPR025447 Protein of unknown function DUF4192 ATC04_01925 28c4bedaf752dc341a1e493a20ae35cc 251 SUPERFAMILY SSF52540 2 227 3.07E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_01925 28c4bedaf752dc341a1e493a20ae35cc 251 Gene3D G3DSA:3.40.50.300 1 245 3.7E-63 T 11-10-2018 ATC04_01925 28c4bedaf752dc341a1e493a20ae35cc 251 Pfam PF00005 ABC transporter 19 164 3.0E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATC04_01925 28c4bedaf752dc341a1e493a20ae35cc 251 SMART SM00382 26 197 9.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ATC04_12960 27ca9da7649b6df8adc24fcc273c7e99 167 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 16 159 7.7E-19 T 11-10-2018 IPR009936 Protein of unknown function DUF1468 ATC04_07755 f8c5c8d8314d78961ce3555775448ae9 140 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 14 135 2.2E-49 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ATC04_07755 f8c5c8d8314d78961ce3555775448ae9 140 SUPERFAMILY SSF51316 14 137 5.75E-54 T 11-10-2018 IPR011057 Mss4-like superfamily ATC04_07755 f8c5c8d8314d78961ce3555775448ae9 140 Pfam PF01641 SelR domain 16 136 8.3E-52 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ATC04_07755 f8c5c8d8314d78961ce3555775448ae9 140 Gene3D G3DSA:2.170.150.20 1 139 2.2E-55 T 11-10-2018 ATC04_17610 6832990ca69f65a2e49a9ae3b20b5fc4 474 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 21 447 6.3E-21 T 11-10-2018 IPR021145 Portal protein ATC04_08905 14b206ec4a07dfb86468edf751e46e2d 205 Gene3D G3DSA:3.40.50.300 10 184 1.3E-22 T 11-10-2018 ATC04_08905 14b206ec4a07dfb86468edf751e46e2d 205 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 11 156 1.9E-7 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 ATC04_08905 14b206ec4a07dfb86468edf751e46e2d 205 SUPERFAMILY SSF52540 10 160 3.46E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_12055 f38ac2b3b809b113c08550ad3a863a2d 283 Pfam PF00482 Type II secretion system (T2SS), protein F 111 236 6.6E-13 T 11-10-2018 IPR018076 Type II secretion system F domain ATC04_12055 f38ac2b3b809b113c08550ad3a863a2d 283 Gene3D G3DSA:1.20.81.30 97 215 1.0E-6 T 11-10-2018 ATC04_17180 dc1949029069d9cefc3a8af45667aab6 229 Pfam PF03591 AzlC protein 5 139 3.6E-30 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease ATC04_03560 de2ff74a6a5b567bd7da415960c6a470 132 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 76 121 5.3E-8 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 ATC04_03560 de2ff74a6a5b567bd7da415960c6a470 132 Pfam PF12728 Helix-turn-helix domain 75 124 4.2E-11 T 11-10-2018 ATC04_03560 de2ff74a6a5b567bd7da415960c6a470 132 SUPERFAMILY SSF46955 75 125 1.1E-6 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ATC04_15095 81e985dd80b7b8162f9cced6060ab3bf 360 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 211 306 2.5E-32 T 11-10-2018 IPR019236 Domain of unknown function DUF2183 ATC04_02805 ac81fc79af28c6be21546a7260e663c8 109 Pfam PF02583 Metal-sensitive transcriptional repressor 19 105 1.6E-30 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 ATC04_02805 ac81fc79af28c6be21546a7260e663c8 109 Gene3D G3DSA:1.20.58.1000 16 109 7.1E-31 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily ATC04_14800 27abcd6e8a016606105067e765ebd472 263 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 35 241 3.4E-47 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 ATC04_15620 6d08a916eb331833d4c586d00d9bfb13 465 SUPERFAMILY SSF52266 171 230 2.17E-10 T 11-10-2018 ATC04_13505 ae811f121fb49f6e31f6bc25f7bbe79c 309 SUPERFAMILY SSF55729 2 140 7.15E-11 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_13505 ae811f121fb49f6e31f6bc25f7bbe79c 309 Gene3D G3DSA:3.40.630.30 15 244 1.8E-13 T 11-10-2018 ATC04_15705 add2b083742051cdc4e100c40640f649 676 SUPERFAMILY SSF51905 8 213 1.62E-11 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_15705 add2b083742051cdc4e100c40640f649 676 Pfam PF13454 FAD-NAD(P)-binding 12 193 8.8E-37 T 11-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain ATC04_05595 ab343cab20af6557e418e8ce1aceff30 323 SUPERFAMILY SSF48150 116 304 1.71E-21 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATC04_05595 ab343cab20af6557e418e8ce1aceff30 323 Gene3D G3DSA:1.10.340.30 127 252 5.4E-16 T 11-10-2018 ATC04_03125 f4ad28304b22c249eb338eea539d7f48 265 Gene3D G3DSA:3.40.630.30 9 260 8.9E-32 T 11-10-2018 ATC04_03125 f4ad28304b22c249eb338eea539d7f48 265 Pfam PF00583 Acetyltransferase (GNAT) family 159 249 2.8E-4 T 11-10-2018 IPR000182 GNAT domain ATC04_03125 f4ad28304b22c249eb338eea539d7f48 265 SUPERFAMILY SSF55729 86 258 3.29E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_03445 12ea1b47b401c6b915941dd125134bb0 202 Pfam PF13460 NAD(P)H-binding 7 189 9.6E-17 T 11-10-2018 IPR016040 NAD(P)-binding domain ATC04_03445 12ea1b47b401c6b915941dd125134bb0 202 SUPERFAMILY SSF51735 1 201 2.33E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ATC04_03445 12ea1b47b401c6b915941dd125134bb0 202 Gene3D G3DSA:3.40.50.720 1 201 3.0E-35 T 11-10-2018 ATC04_18505 1c12cc4fe1fc909d5a7d3140b7bc2ec0 112 Pfam PF16259 Domain of unknown function (DUF4913) 2 95 1.4E-29 T 11-10-2018 IPR032584 Protein of unknown function DUF4913 ATC04_04380 6ef1550086873397f324e1de0b8a9801 365 SUPERFAMILY SSF50182 197 262 3.24E-13 T 11-10-2018 IPR010920 LSM domain superfamily ATC04_04380 6ef1550086873397f324e1de0b8a9801 365 Pfam PF00924 Mechanosensitive ion channel 153 340 2.4E-27 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ATC04_07460 9448f14a440abbc7a0e5173d8eb979cf 249 Pfam PF13829 Domain of unknown function (DUF4191) 28 245 1.1E-78 T 11-10-2018 IPR025445 Protein of unknown function DUF4191 ATC04_07460 9448f14a440abbc7a0e5173d8eb979cf 249 ProDom PD037701 MEMBRANE INTEGRAL TRANSMEMBRANE RV2219/MT2276 NARROWLY PROBABLE PRECURSOR SIGNAL MLCB22.21 25 244 3.0E-64 T 11-10-2018 ATC04_11710 9686fb07db8bc9cbcc4dd21f60c233a7 563 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 234 529 1.5E-65 T 11-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal ATC04_10840 3beea53014ad0d32d1e6f1a3edd50ff5 187 SUPERFAMILY SSF52788 2 184 3.92E-17 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily ATC04_10840 3beea53014ad0d32d1e6f1a3edd50ff5 187 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 2 103 1.1E-11 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ATC04_10840 3beea53014ad0d32d1e6f1a3edd50ff5 187 SMART SM00226 2 129 0.0042 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ATC04_10840 3beea53014ad0d32d1e6f1a3edd50ff5 187 Gene3D G3DSA:3.40.50.2300 1 133 1.8E-23 T 11-10-2018 ATC04_09195 e189f150ba551f4dc12515edc1d74f31 123 Pfam PF06103 Bacterial protein of unknown function (DUF948) 6 86 8.1E-24 T 11-10-2018 IPR009293 Uncharacterised protein family UPF0478 ATC04_15005 c31321d806ce5b86f1c51e6c73555a59 457 SUPERFAMILY SSF89796 206 403 1.44E-53 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily ATC04_15005 c31321d806ce5b86f1c51e6c73555a59 457 Pfam PF02515 CoA-transferase family III 208 400 2.7E-43 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 ATC04_15005 c31321d806ce5b86f1c51e6c73555a59 457 SUPERFAMILY SSF89796 87 185 3.92E-12 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily ATC04_15005 c31321d806ce5b86f1c51e6c73555a59 457 Gene3D G3DSA:3.40.50.10540 204 421 2.0E-52 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily ATC04_13385 94bb3502d5283bf21e33c0f80d6745cc 280 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 24 137 9.3E-20 T 11-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III ATC04_06885 b330ba0b658bc38269d681c6daa6b583 283 Gene3D G3DSA:1.10.150.650 100 168 1.6E-29 T 11-10-2018 ATC04_06885 b330ba0b658bc38269d681c6daa6b583 283 SMART SM00481 3 68 4.3E-17 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal ATC04_06885 b330ba0b658bc38269d681c6daa6b583 283 Pfam PF02811 PHP domain 4 165 4.9E-8 T 11-10-2018 IPR004013 PHP domain GO:0003824 ATC04_06885 b330ba0b658bc38269d681c6daa6b583 283 SUPERFAMILY SSF89550 1 259 4.51E-45 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ATC04_04865 8af4b7ddb6c3043b288cddc7b97ff7f4 149 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 101 1.8E-25 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like ATC04_12760 1c767d01233a25c57c3d17d5c1ecba97 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 5.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_12760 1c767d01233a25c57c3d17d5c1ecba97 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 5.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_12760 1c767d01233a25c57c3d17d5c1ecba97 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 5.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_12760 1c767d01233a25c57c3d17d5c1ecba97 260 Pfam PF12697 Alpha/beta hydrolase family 28 235 8.2E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_12760 1c767d01233a25c57c3d17d5c1ecba97 260 Gene3D G3DSA:3.40.50.1820 14 245 2.7E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_12760 1c767d01233a25c57c3d17d5c1ecba97 260 SUPERFAMILY SSF53474 15 242 2.01E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_17290 a14cf2b4e597ecf9a3d3ecd507208bb3 291 Pfam PF01925 Sulfite exporter TauE/SafE 5 239 1.6E-52 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ATC04_11280 525390757af0133788df4193add5f9fd 79 Pfam PF06289 Flagellar protein (FlbD) 1 58 4.9E-23 T 11-10-2018 IPR009384 Swarming motility protein SwrD-like ATC04_07085 d672cccf16f70f475eabfd1215703e8f 253 SUPERFAMILY SSF102588 14 242 7.06E-47 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ATC04_07085 d672cccf16f70f475eabfd1215703e8f 253 Pfam PF02585 GlcNAc-PI de-N-acetylase 16 145 2.8E-26 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 ATC04_07085 d672cccf16f70f475eabfd1215703e8f 253 Gene3D G3DSA:3.40.50.10320 1 243 7.0E-62 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ATC04_05100 c342b7856e6c340025d9daed8a4229ac 304 SUPERFAMILY SSF55811 25 208 4.7E-8 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ATC04_05100 c342b7856e6c340025d9daed8a4229ac 304 Gene3D G3DSA:3.90.79.10 25 239 3.2E-39 T 11-10-2018 ATC04_01480 993549cd567f05571ff016f84d0e64fb 363 Pfam PF03060 Nitronate monooxygenase 9 342 1.3E-92 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ATC04_01480 993549cd567f05571ff016f84d0e64fb 363 SUPERFAMILY SSF51412 7 349 5.34E-57 T 11-10-2018 ATC04_01480 993549cd567f05571ff016f84d0e64fb 363 Gene3D G3DSA:3.20.20.70 7 357 4.1E-91 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ATC04_07570 7f77fd1ac5d5cf1cf2c9267c8138fd57 350 Pfam PF11268 Protein of unknown function (DUF3071) 1 167 4.2E-43 T 11-10-2018 IPR021421 Protein of unknown function DUF3071 ATC04_09990 b42da6ae26e2e9f8b49b62604e766d4c 299 Pfam PF02104 SURF1 family 19 223 2.3E-26 T 11-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATC04_12740 462bb6b94e37fa284c3b4fdc7218f025 395 Pfam PF07786 Protein of unknown function (DUF1624) 9 217 5.2E-12 T 11-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 ATC04_02010 622b73a248476325da7a8afa4887db8b 313 Gene3D G3DSA:3.40.50.300 46 288 1.4E-43 T 11-10-2018 ATC04_02010 622b73a248476325da7a8afa4887db8b 313 SUPERFAMILY SSF52540 74 235 4.21E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_02010 622b73a248476325da7a8afa4887db8b 313 Pfam PF06414 Zeta toxin 72 251 5.5E-25 T 11-10-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 ATC04_13890 3e0ae59977ac8161a2f495fda9e31659 487 Pfam PF07786 Protein of unknown function (DUF1624) 46 246 2.9E-7 T 11-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 ATC04_08980 d87d963a1f48ce33cfb736d33aea4368 171 Pfam PF07853 Protein of unknown function (DUF1648) 26 69 1.8E-15 T 11-10-2018 IPR012867 Domain of unknown function DUF1648 ATC04_08340 e46517320dc38d04f48ea52380fffb22 204 Pfam PF02361 Cobalt transport protein 7 196 8.2E-14 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component ATC04_18010 4d68c3769fef7231169e299e58be7529 146 Pfam PF16259 Domain of unknown function (DUF4913) 37 128 3.7E-26 T 11-10-2018 IPR032584 Protein of unknown function DUF4913 ATC04_09980 a5a792f8d002aaf59e1e514c464caf1c 141 Pfam PF11298 Protein of unknown function (DUF3099) 17 81 7.3E-25 T 11-10-2018 IPR021449 Protein of unknown function DUF3099 ATC04_12800 0601b5fdc034f44774400fa6a68ecfdc 276 Gene3D G3DSA:3.20.20.150 1 271 2.4E-34 T 11-10-2018 ATC04_12800 0601b5fdc034f44774400fa6a68ecfdc 276 SUPERFAMILY SSF51658 8 269 2.82E-40 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ATC04_05175 dec277daba05afefc22bbd7b3143b85e 128 TIGRFAM TIGR03816 tadE_like_DECH: helicase/secretion neighborhood TadE-like protein 9 122 6.0E-19 T 11-10-2018 IPR021202 Apoptosis inhibitor Rv3654c-like ATC04_06165 90d94800c4454c255a9cecf577ede769 167 Gene3D G3DSA:3.10.180.10 25 158 1.8E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_06165 90d94800c4454c255a9cecf577ede769 167 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 34 144 3.2E-7 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATC04_06165 90d94800c4454c255a9cecf577ede769 167 SUPERFAMILY SSF54593 26 160 2.01E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATC04_18515 fe810b6ea2e98d2eb57714dbb883d541 514 SUPERFAMILY SSF52540 60 414 8.01E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_18515 fe810b6ea2e98d2eb57714dbb883d541 514 Gene3D G3DSA:3.40.50.300 224 487 6.2E-16 T 11-10-2018 ATC04_18515 fe810b6ea2e98d2eb57714dbb883d541 514 Gene3D G3DSA:3.40.50.300 60 211 2.6E-6 T 11-10-2018 ATC04_11575 3d3bcad2791b4f839c2979d215252480 424 Gene3D G3DSA:1.20.1250.20 32 416 8.5E-26 T 11-10-2018 ATC04_11575 3d3bcad2791b4f839c2979d215252480 424 SUPERFAMILY SSF103473 34 411 5.75E-27 T 11-10-2018 IPR036259 MFS transporter superfamily ATC04_11575 3d3bcad2791b4f839c2979d215252480 424 Pfam PF07690 Major Facilitator Superfamily 255 406 2.2E-8 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATC04_02600 8ffde8fc674db9851ad1056fafb122f8 172 SUPERFAMILY SSF54637 15 168 3.93E-16 T 11-10-2018 IPR029069 HotDog domain superfamily ATC04_02600 8ffde8fc674db9851ad1056fafb122f8 172 Pfam PF13452 N-terminal half of MaoC dehydratase 20 158 3.6E-23 T 11-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 ATC04_02600 8ffde8fc674db9851ad1056fafb122f8 172 Gene3D G3DSA:3.10.129.10 4 172 1.2E-54 T 11-10-2018 ATC04_09240 393bbd6a7cc6762cbc4bbdcf6e14450b 176 SUPERFAMILY SSF48452 57 160 1.97E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_09240 393bbd6a7cc6762cbc4bbdcf6e14450b 176 Gene3D G3DSA:1.25.40.10 29 175 8.2E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ATC04_02980 f65f8ba28c3a605a1842c49bc3c738c9 506 Pfam PF13520 Amino acid permease 29 422 6.2E-35 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_02980 f65f8ba28c3a605a1842c49bc3c738c9 506 PIRSF PIRSF006060 4 503 1.9E-58 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ATC04_02980 f65f8ba28c3a605a1842c49bc3c738c9 506 Gene3D G3DSA:1.20.1740.10 23 479 6.0E-43 T 11-10-2018 ATC04_05360 f2cd06900e6221ad05b36090f830f64e 204 Pfam PF01184 GPR1/FUN34/yaaH family 17 192 1.4E-41 T 11-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 ATC04_14420 a734c9ea3e630381ddf67a487914ebf4 229 Pfam PF09335 SNARE associated Golgi protein 34 159 1.5E-16 T 11-10-2018 IPR032816 SNARE associated Golgi protein ATC04_12505 017fa3e29b8acbe3621b816ad4337b61 305 Pfam PF04909 Amidohydrolase 30 298 8.1E-32 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ATC04_12505 017fa3e29b8acbe3621b816ad4337b61 305 SUPERFAMILY SSF51556 29 298 1.29E-45 T 11-10-2018 IPR032466 Metal-dependent hydrolase ATC04_12505 017fa3e29b8acbe3621b816ad4337b61 305 Gene3D G3DSA:3.20.20.140 14 302 5.1E-42 T 11-10-2018 ATC04_04630 36063a2e738b2045470f311d86f75dab 152 Pfam PF04213 Htaa 9 149 3.4E-24 T 11-10-2018 IPR007331 Htaa ATC04_02020 92c0571e69bebb1d1e06fc8849498f54 153 Pfam PF10002 Predicted membrane protein (DUF2243) 14 142 5.6E-43 T 11-10-2018 IPR018719 Protein of unknown function DUF2243, membrane ATC04_02065 5011e565693b4fc7524e22dd712933da 633 Pfam PF01757 Acyltransferase family 27 356 1.7E-30 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ATC04_02065 5011e565693b4fc7524e22dd712933da 633 SUPERFAMILY SSF52266 483 631 4.83E-9 T 11-10-2018 ATC04_08350 96824d4aa10230338b6471bf80fe5ca7 240 Pfam PF01810 LysE type translocator 15 235 3.8E-28 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ATC04_16665 fd56e277b00e5293befcb8c60062ae1d 175 Pfam PF03640 Secreted repeat of unknown function 126 167 2.4E-15 T 11-10-2018 IPR005297 Lipoprotein repeat ATC04_16665 fd56e277b00e5293befcb8c60062ae1d 175 Pfam PF03640 Secreted repeat of unknown function 67 109 1.3E-13 T 11-10-2018 IPR005297 Lipoprotein repeat ATC04_07200 843b531a4dea7c8b72061ffc1406271a 357 SUPERFAMILY SSF51726 96 284 8.89E-7 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ATC04_07200 843b531a4dea7c8b72061ffc1406271a 357 Gene3D G3DSA:3.20.20.210 87 352 7.0E-7 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ATC04_11400 f5c92b7c1f08fc74e6acb840d2c7925b 158 SUPERFAMILY SSF55961 11 147 1.27E-22 T 11-10-2018 ATC04_11400 f5c92b7c1f08fc74e6acb840d2c7925b 158 Gene3D G3DSA:3.30.530.20 12 157 3.2E-29 T 11-10-2018 IPR023393 START-like domain superfamily ATC04_11400 f5c92b7c1f08fc74e6acb840d2c7925b 158 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 23 146 2.2E-14 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like ATC04_02845 b3bdfecc8bb65fbe2937cf462a120855 188 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 11 85 1.7E-6 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ATC04_02845 b3bdfecc8bb65fbe2937cf462a120855 188 SUPERFAMILY SSF143011 11 81 7.72E-8 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily ATC04_02845 b3bdfecc8bb65fbe2937cf462a120855 188 Gene3D G3DSA:3.30.2310.20 9 110 1.1E-5 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily ATC04_14435 58d0387b5972f3d47f23cee66c6e2456 424 Pfam PF02653 Branched-chain amino acid transport system / permease component 127 403 9.4E-36 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ATC04_16200 7574ab717c4252347663742b58bf76f1 361 Pfam PF13515 Fusaric acid resistance protein-like 213 334 7.3E-18 T 11-10-2018 ATC04_03000 672a0ee489183497748743c0d218bccc 62 Pfam PF05532 CsbD-like 5 57 1.8E-17 T 11-10-2018 IPR008462 CsbD-like domain ATC04_03000 672a0ee489183497748743c0d218bccc 62 Gene3D G3DSA:1.10.1470.10 4 62 8.0E-7 T 11-10-2018 IPR036629 YjbJ superfamily ATC04_03000 672a0ee489183497748743c0d218bccc 62 SUPERFAMILY SSF69047 5 60 4.84E-9 T 11-10-2018 IPR036629 YjbJ superfamily ATC04_03470 b7701dad4bac4c82a041c5c5e92b6f3c 109 Pfam PF02656 Domain of unknown function (DUF202) 9 73 9.3E-11 T 11-10-2018 IPR003807 Domain of unknown function DUF202 ATC04_03470 b7701dad4bac4c82a041c5c5e92b6f3c 109 ProDom PD277113 MEMBRANE INNER YIDG TRANSMEMBRANE STY3975 RV2273/MT2334 MB2296 9 105 8.0E-14 T 11-10-2018 IPR020264 Uncharacterised protein family YidG ATC04_10275 d2eeab3a79e01de127ec2f5139f99457 158 Pfam PF11253 Protein of unknown function (DUF3052) 33 156 3.9E-51 T 11-10-2018 IPR021412 Protein of unknown function DUF3052 ATC04_07975 ecac5c1487e7c43f6d050e953472a91f 181 SUPERFAMILY SSF53597 6 177 3.4E-25 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_07975 ecac5c1487e7c43f6d050e953472a91f 181 Pfam PF01872 RibD C-terminal domain 107 166 4.0E-10 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ATC04_07975 ecac5c1487e7c43f6d050e953472a91f 181 Gene3D G3DSA:3.40.430.10 1 180 4.6E-38 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ATC04_17960 d3a3722d1cc9c6ef44fbc6219e10ed3b 492 SUPERFAMILY SSF50998 175 391 1.45E-5 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ATC04_18490 db775ae520ceac777f689f316c73a199 136 Pfam PF05713 Bacterial mobilisation protein (MobC) 82 128 1.6E-8 T 11-10-2018 IPR008687 Bacterial mobilisation ATC04_14320 1211c8d156923da87b98e0f2964b3f86 139 Pfam PF14155 Domain of unknown function (DUF4307) 24 130 2.1E-19 T 11-10-2018 IPR025443 Protein of unknown function DUF4307 ATC04_15330 3c65055c689d1ef97f3e2075702dc2bf 96 Pfam PF11662 Protein of unknown function (DUF3263) 17 87 3.0E-33 T 11-10-2018 IPR021678 Protein of unknown function DUF3263 ATC04_06635 71cb762d2013ae8167a44efe41c74c85 97 Pfam PF14117 Domain of unknown function (DUF4287) 2 63 1.8E-23 T 11-10-2018 IPR025629 Protein of unknown function DUF4287 ATC04_15835 8aac28cacfe8b38e359953318a4ec47d 377 SUPERFAMILY SSF52540 187 303 2.31E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATC04_15835 8aac28cacfe8b38e359953318a4ec47d 377 Gene3D G3DSA:3.40.50.300 183 288 9.2E-9 T 11-10-2018 ATC04_02720 bee656ee3245d3a2ab2bb578a205c6cf 186 Pfam PF03729 Short repeat of unknown function (DUF308) 63 128 0.0029 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane ATC04_02720 bee656ee3245d3a2ab2bb578a205c6cf 186 Pfam PF03729 Short repeat of unknown function (DUF308) 3 73 0.0046 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane ATC04_00810 fc8752868ae1735f9748237f50625a22 402 Pfam PF01266 FAD dependent oxidoreductase 7 394 2.6E-62 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATC04_00810 fc8752868ae1735f9748237f50625a22 402 SUPERFAMILY SSF51905 8 397 9.93E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_11665 5e69bafd0e2d7f9ee10bcb3876384270 149 Pfam PF05232 Chlorhexidine efflux transporter 5 64 1.8E-16 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter ATC04_11665 5e69bafd0e2d7f9ee10bcb3876384270 149 Pfam PF05232 Chlorhexidine efflux transporter 70 133 3.6E-23 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter ATC04_05315 57b9c2fa3e6b229924d94dc0d8dc91cd 96 Pfam PF14012 Protein of unknown function (DUF4229) 4 61 2.7E-13 T 11-10-2018 IPR025323 Protein of unknown function DUF4229 ATC04_04880 8da029fd299b80f6b9d30de778af33ba 88 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 32 82 1.9E-10 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 ATC04_05305 c9b396ff08acd2b0bf53d419ae886181 353 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 113 351 6.4E-72 T 11-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 ATC04_05305 c9b396ff08acd2b0bf53d419ae886181 353 Pfam PF01578 Cytochrome C assembly protein 136 348 2.1E-44 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ATC04_09000 896a4ca6964fe425429dd61abe909067 186 Pfam PF01230 HIT domain 57 150 3.1E-15 T 11-10-2018 IPR001310 Histidine triad (HIT) protein ATC04_09000 896a4ca6964fe425429dd61abe909067 186 SUPERFAMILY SSF54197 23 175 2.63E-40 T 11-10-2018 IPR036265 HIT-like superfamily ATC04_09000 896a4ca6964fe425429dd61abe909067 186 Gene3D G3DSA:3.30.428.10 12 186 2.9E-57 T 11-10-2018 IPR036265 HIT-like superfamily ATC04_17045 531eedc80d6d174325e931e8a5875c4d 145 Gene3D G3DSA:1.10.10.10 1 137 2.0E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ATC04_17045 531eedc80d6d174325e931e8a5875c4d 145 SUPERFAMILY SSF46785 5 136 5.01E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ATC04_12000 1f38ac09f11f0774bc10714360ca22ba 168 Pfam PF10823 Protein of unknown function (DUF2568) 19 98 7.8E-7 T 11-10-2018 IPR021214 Protein of unknown function DUF2568 ATC04_14395 7e6c886af7f9d6fe728ea9ef5792274a 150 Pfam PF04977 Septum formation initiator 35 112 8.6E-19 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC ATC04_10245 dcb54c1a746debcc30940cf82e2d0245 212 Pfam PF03006 Haemolysin-III related 12 204 6.4E-39 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 ATC04_06625 761ebe735ded025b0bc3b116f4f8c676 189 SUPERFAMILY SSF55729 14 172 2.81E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ATC04_06625 761ebe735ded025b0bc3b116f4f8c676 189 Gene3D G3DSA:3.40.630.30 10 182 8.6E-30 T 11-10-2018 ATC04_06625 761ebe735ded025b0bc3b116f4f8c676 189 Pfam PF13302 Acetyltransferase (GNAT) domain 18 147 2.2E-12 T 11-10-2018 IPR000182 GNAT domain ATC04_00890 ac6273501f2846f283b7001f593e04a7 390 Gene3D G3DSA:3.30.450.40 39 220 1.2E-43 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_13310 1dd623a11b1315169061682ce579f78a 115 Pfam PF04341 Protein of unknown function, DUF485 20 106 1.3E-34 T 11-10-2018 IPR007436 Protein of unknown function DUF485 ATC04_02955 255e13006a73eb994948b07daba04072 191 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 11 44 8.2E-5 T 11-10-2018 IPR023833 Signal peptide, camelysin ATC04_12875 79cd714a7cd0d027127a0e19d2aea877 134 Gene3D G3DSA:3.40.50.1010 9 122 4.1E-5 T 11-10-2018 ATC04_01905 4b0f66c3e78cf7a8af2e5ce04c32ca08 420 SUPERFAMILY SSF53850 44 415 2.9E-41 T 11-10-2018 ATC04_01905 4b0f66c3e78cf7a8af2e5ce04c32ca08 420 Gene3D G3DSA:3.40.190.10 144 377 5.0E-67 T 11-10-2018 ATC04_01905 4b0f66c3e78cf7a8af2e5ce04c32ca08 420 Pfam PF01547 Bacterial extracellular solute-binding protein 74 339 3.2E-22 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ATC04_01905 4b0f66c3e78cf7a8af2e5ce04c32ca08 420 Gene3D G3DSA:3.40.190.10 50 363 5.0E-67 T 11-10-2018 ATC04_01245 24d858e2bd79f4ccaf40848b465884a2 348 Gene3D G3DSA:3.30.530.90 119 348 1.7E-47 T 11-10-2018 ATC04_14925 92c04988950bcf8ed233a932dafd38e8 406 Pfam PF01566 Natural resistance-associated macrophage protein 46 373 1.0E-25 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ATC04_15920 1af3043ff4879bf0ff29ace0b6c5f880 65 Pfam PF11457 Protein of unknown function (DUF3021) 1 49 2.9E-6 T 11-10-2018 IPR021560 Protein of unknown function DUF3021 ATC04_08910 e39bfee0ab875f336d7b4d5e039c717b 250 Gene3D G3DSA:3.30.930.10 9 248 1.3E-34 T 11-10-2018 ATC04_08910 e39bfee0ab875f336d7b4d5e039c717b 250 SUPERFAMILY SSF55681 20 242 3.38E-37 T 11-10-2018 ATC04_10010 ad530ffe36e5524b2d745a58d3ea9cae 256 Pfam PF10935 Protein of unknown function (DUF2637) 19 147 3.7E-18 T 11-10-2018 IPR021235 Protein of unknown function DUF2637 ATC04_10560 f23f55b03d0004aef1ded94a8e8162de 62 Pfam PF13384 Homeodomain-like domain 6 36 1.0E-6 T 11-10-2018 ATC04_17615 d5300efdcf00a0acdac8c2e6453ebb1a 577 Pfam PF03354 Phage Terminase 89 551 3.1E-59 T 11-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type ATC04_17615 d5300efdcf00a0acdac8c2e6453ebb1a 577 Gene3D G3DSA:3.40.50.300 89 263 9.2E-17 T 11-10-2018 ATC04_14000 21f9d9605ba0d91783992a821d3c6ed1 164 Pfam PF10698 Protein of unknown function (DUF2505) 5 162 7.2E-39 T 11-10-2018 IPR019639 Protein of unknown function DUF2505 ATC04_04085 0eb5a3a0dc6a7e57e75d0049a942ed75 248 Pfam PF16481 Domain of unknown function (DUF5058) 22 239 4.3E-64 T 11-10-2018 IPR032479 Protein of unknown function DUF5058 ATC04_01425 85472710a76445cef7ebf9e2e9884e45 153 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 7 90 7.5E-21 T 11-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane ATC04_01425 85472710a76445cef7ebf9e2e9884e45 153 Pfam PF12823 Domain of unknown function (DUF3817) 5 91 3.5E-21 T 11-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane ATC04_14515 8c4fe7b661f21cf6b8f558155f887b45 266 Pfam PF11139 Sap, sulfolipid-1-addressing protein 12 248 3.3E-23 T 11-10-2018 IPR021315 Glycolipid exporter Gap/Sap ATC04_08220 0873442b9fc31fa8c2072dc7d648bb8d 83 Pfam PF03840 Preprotein translocase SecG subunit 7 75 7.1E-18 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ATC04_08220 0873442b9fc31fa8c2072dc7d648bb8d 83 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 76 2.4E-18 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ATC04_13855 2c7bee8b6e9b7adffedd458404d88002 73 Pfam PF13822 Acyl-CoA carboxylase epsilon subunit 12 57 3.3E-10 T 11-10-2018 IPR032716 Acyl-CoA carboxylase epsilon subunit ATC04_08375 f9c8e900aa084f651ec2ab6d136950c1 291 Pfam PF02517 CAAX protease self-immunity 130 231 1.6E-17 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 ATC04_02155 a79b0ade5c8407008def38110b0dc05f 193 Pfam PF03729 Short repeat of unknown function (DUF308) 140 185 0.0021 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane ATC04_02155 a79b0ade5c8407008def38110b0dc05f 193 Pfam PF03729 Short repeat of unknown function (DUF308) 23 94 1.3E-10 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane ATC04_04890 14205442f51548e47b64574050e115e3 83 Pfam PF14019 Protein of unknown function (DUF4235) 6 82 7.4E-21 T 11-10-2018 IPR025329 Protein of unknown function DUF4235 ATC04_09890 80977f66f509e9bea96327dbe8ed802b 102 Pfam PF13166 AAA domain 3 79 3.8E-11 T 11-10-2018 IPR026866 Protein CR006, P-loop domain ATC04_03710 2af1e6cf9f86a73b1ce017ff488f0643 166 Pfam PF09335 SNARE associated Golgi protein 14 118 8.5E-10 T 11-10-2018 IPR032816 SNARE associated Golgi protein ATC04_14345 83d9413e537bd17a765098f808517a45 264 Pfam PF13185 GAF domain 100 251 1.5E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 ATC04_14345 83d9413e537bd17a765098f808517a45 264 Gene3D G3DSA:3.30.450.40 91 256 3.4E-6 T 11-10-2018 IPR029016 GAF-like domain superfamily ATC04_11100 ae197257bad055a836fc49ec8b87a4cf 115 TIGRFAM TIGR03462 CarR_dom_SF: lycopene cyclase domain 1 90 4.4E-14 T 11-10-2018 IPR017825 Lycopene cyclase domain GO:0016872 KEGG: 00906+2.5.1.32+5.5.1.19|MetaCyc: PWY-5943|MetaCyc: PWY-5947|MetaCyc: PWY-6279|MetaCyc: PWY-7591|MetaCyc: PWY-7938|MetaCyc: PWY-7939|MetaCyc: PWY-7947 ATC04_17875 e889da57a2042b6e1fdb696a43d92784 164 Pfam PF03780 Asp23 family, cell envelope-related function 39 149 2.0E-30 T 11-10-2018 IPR005531 Alkaline shock protein Asp23 ATC04_07575 0569761113b04367a80ec8efb11b06fd 100 Pfam PF13834 Domain of unknown function (DUF4193) 1 99 1.6E-23 T 11-10-2018 IPR025242 Protein of unknown function DUF4193 ATC04_10850 ba8290961bb855da4903c1ee09cc3b17 339 Gene3D G3DSA:3.40.50.2000 42 140 3.2E-15 T 11-10-2018 ATC04_10850 ba8290961bb855da4903c1ee09cc3b17 339 SUPERFAMILY SSF53756 2 324 3.77E-18 T 11-10-2018 ATC04_10850 ba8290961bb855da4903c1ee09cc3b17 339 Gene3D G3DSA:3.40.50.2000 141 301 3.2E-15 T 11-10-2018 ATC04_12240 c0e09baf796e40cc9ce2d52c3549da66 119 Pfam PF04343 Protein of unknown function, DUF488 6 113 6.0E-29 T 11-10-2018 IPR007438 Protein of unknown function DUF488 ATC04_17175 f67ff0371e72ca3d07b8c155e9e7f4fe 105 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 99 7.2E-9 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD ATC04_17845 fa114d54648a5eaff14da5728fe92b38 298 Pfam PF01925 Sulfite exporter TauE/SafE 9 244 1.1E-51 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ATC04_03235 0ac1b079fd5e9ff281b09480f7b2cf7f 129 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 2 119 1.8E-30 T 11-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV ATC04_02645 06c2ca0cd381adf7223c73bf9d13af7b 352 Pfam PF13515 Fusaric acid resistance protein-like 221 342 3.5E-19 T 11-10-2018 ATC04_14335 df8e438bf78ecc38df1c7834d66483be 433 Pfam PF01594 AI-2E family transporter 52 377 1.1E-52 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like ATC04_10130 6310c932fbc27886b268c2312ec841fa 262 Pfam PF03883 Peroxide stress protein YaaA 2 232 1.9E-42 T 11-10-2018 IPR005583 Peroxide stress protein YaaA ATC04_07435 060be21beb036f2f4e3758ed53970788 164 PIRSF PIRSF010260 4 164 3.5E-35 T 11-10-2018 IPR014457 Uncharacterised conserved protein UCP010260 ATC04_07435 060be21beb036f2f4e3758ed53970788 164 Pfam PF09348 Domain of unknown function (DUF1990) 10 157 1.0E-28 T 11-10-2018 IPR018960 Domain of unknown function DUF1990 ATC04_12295 20e806508b211a9ca3b785814613eb1c 305 Pfam PF02616 Segregation and condensation protein ScpA 50 281 2.0E-44 T 11-10-2018 IPR003768 Segregation and condensation protein A ATC04_10285 784ccc7cebc00f733b311a99734525b5 402 Gene3D G3DSA:1.10.10.2840 272 400 1.6E-40 T 11-10-2018 ATC04_10285 784ccc7cebc00f733b311a99734525b5 402 Pfam PF13556 PucR C-terminal helix-turn-helix domain 336 393 1.8E-19 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ATC04_02885 a2e031a7ba76ffabc181c9317329ef49 83 Gene3D G3DSA:3.40.50.1820 1 82 3.0E-9 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_02885 a2e031a7ba76ffabc181c9317329ef49 83 SUPERFAMILY SSF53474 12 81 1.33E-9 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_11770 85ce261384dc19f5aa80a28e78b80787 142 Pfam PF10739 Protein of unknown function (DUF2550) 16 135 4.3E-29 T 11-10-2018 IPR019675 Protein of unknown function DUF2550 ATC04_11705 1a1a0a8e436f040900430f9d00b9d239 291 SUPERFAMILY SSF103481 36 111 3.47E-6 T 11-10-2018 ATC04_01955 061d56b0bb33cea3ef8653d03ad08fec 71 Pfam PF11160 Protein of unknown function (DUF2945) 8 66 4.0E-27 T 11-10-2018 IPR021331 Protein of unknown function DUF2945 ATC04_04520 383fa3b699b198fafd1b691ee888ade7 390 Pfam PF02517 CAAX protease self-immunity 173 263 2.7E-13 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 ATC04_10260 d81a02bfc6b2aafd457c26a13a6c49f3 371 Pfam PF01594 AI-2E family transporter 40 357 2.4E-46 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like ATC04_13870 8b2dc456a5ca8ba3c1d3a9e16e90fe1f 556 Pfam PF05960 Bacterial protein of unknown function (DUF885) 30 552 3.4E-153 T 11-10-2018 IPR010281 Protein of unknown function DUF885 ATC04_07735 671f3ad868af49e7937fd9d24bb7c120 212 Pfam PF11452 Protein of unknown function (DUF3000) 11 203 1.1E-70 T 11-10-2018 IPR021555 Protein of unknown function DUF3000 ATC04_05240 43fd32583308be3d2e53e42b8d49895c 477 Pfam PF02386 Cation transport protein 66 455 3.2E-52 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 ATC04_01385 09b5eba2fe34b6a1f942d1246506e009 285 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 269 3.6E-31 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ATC04_07050 7055203cf1662d381f3f557771c89964 310 Pfam PF00872 Transposase, Mutator family 36 115 1.4E-10 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATC04_14510 33fdb2a799f5bdd4a262a6bf52eaeeb0 165 SUPERFAMILY SSF161098 11 80 8.67E-5 T 11-10-2018 IPR035906 MetI-like superfamily ATC04_12710 c85c40d9ddb2fdc2c6d46e8dc846c2c1 99 Pfam PF05154 TM2 domain 2 45 5.2E-16 T 11-10-2018 IPR007829 TM2 domain ATC04_15045 5a996175cc862a035dfd61b54198c038 230 Pfam PF13835 Domain of unknown function (DUF4194) 32 187 6.8E-32 T 11-10-2018 IPR025449 Protein of unknown function DUF4194 ATC04_12050 b94dba498553a1aca9d1c37895ae45d4 313 Pfam PF00482 Type II secretion system (T2SS), protein F 178 301 1.7E-14 T 11-10-2018 IPR018076 Type II secretion system F domain ATC04_08275 cff975a0540533209333168075631f2d 312 Pfam PF08006 Protein of unknown function (DUF1700) 10 71 1.5E-8 T 11-10-2018 IPR012963 Protein of unknown function DUF1700 ATC04_17620 aefc00a5d57feedd4eaa89e00092f1f1 199 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 93 190 2.8E-13 T 11-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family ATC04_17620 aefc00a5d57feedd4eaa89e00092f1f1 199 Pfam PF05119 Phage terminase, small subunit 97 186 3.4E-14 T 11-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family ATC04_02820 58700ee88bb77d55689345447971bac9 259 Pfam PF14016 Protein of unknown function (DUF4232) 101 234 9.5E-17 T 11-10-2018 IPR025326 Protein of unknown function DUF4232 ATC04_18400 51e0ca6dcc8ea5d5d18780c952ee3e81 342 Pfam PF12083 Domain of unknown function (DUF3560) 89 206 1.4E-29 T 11-10-2018 IPR021944 Protein of unknown function DUF3560 ATC04_11880 6f8b910ad2ec9e6e0cd7996d7c1a52a1 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 273 3.5E-35 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ATC04_09755 1e9086dbfd626aca4cd79529aec9e56b 427 Pfam PF01566 Natural resistance-associated macrophage protein 41 395 5.9E-37 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ATC04_03845 f8f3024b60aa9e9e1aa653f40c3aa7c4 398 TIGRFAM TIGR03364 HpnW_proposed: FAD dependent oxidoreductase TIGR03364 16 381 3.2E-129 T 11-10-2018 IPR017741 FAD-dependent oxidoreductase, HpnW ATC04_03845 f8f3024b60aa9e9e1aa653f40c3aa7c4 398 SUPERFAMILY SSF51905 16 346 4.4E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ATC04_03845 f8f3024b60aa9e9e1aa653f40c3aa7c4 398 Pfam PF01266 FAD dependent oxidoreductase 17 379 8.9E-29 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATC04_09655 d78baa46cdb52bf17a36c151c4bb8dc1 667 Pfam PF13280 WYL domain 148 319 1.0E-19 T 11-10-2018 IPR026881 WYL domain ATC04_09655 d78baa46cdb52bf17a36c151c4bb8dc1 667 Pfam PF13280 WYL domain 493 660 4.7E-22 T 11-10-2018 IPR026881 WYL domain ATC04_00765 1006729ce6ad3aa31f8a92632185b576 344 Pfam PF02698 DUF218 domain 169 312 6.9E-28 T 11-10-2018 IPR003848 Domain of unknown function DUF218 ATC04_00395 64089abe04e881cdeda15d9bdbc73617 423 Pfam PF00860 Permease family 28 381 1.0E-71 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ATC04_00395 64089abe04e881cdeda15d9bdbc73617 423 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 24 402 2.0E-88 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ATC04_17420 82dfb55a1f3d0634c8eb9b6862edd9f6 339 Pfam PF01384 Phosphate transporter family 22 325 1.3E-51 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 ATC04_00350 1e2d253172026870d956ce8a9dfb8116 109 Pfam PF13828 Domain of unknown function (DUF4190) 20 80 4.8E-9 T 11-10-2018 IPR025241 Domain of unknown function DUF4190 ATC04_16580 dbc895a150875d021f324d2370802ea3 233 Pfam PF07510 Protein of unknown function (DUF1524) 89 226 5.7E-17 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 ATC04_10235 df95fa250fbc42cb03e340e1dcc77f22 87 Pfam PF04226 Transglycosylase associated protein 34 83 5.6E-10 T 11-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 ATC04_05675 0bd68b264554d7259fd9a2d40eea4b2a 278 Pfam PF12684 PDDEXK-like domain of unknown function (DUF3799) 30 248 2.9E-36 T 11-10-2018 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain ATC04_05675 0bd68b264554d7259fd9a2d40eea4b2a 278 Gene3D G3DSA:3.90.320.10 13 264 7.9E-62 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal ATC04_00790 aa2545ff9e499ffa1b5957a05427cf98 161 Pfam PF06305 Lipopolysaccharide assembly protein A domain 102 156 1.9E-8 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 ATC04_08560 9287609a6be9157ebee9741a72e657c6 145 Pfam PF11070 Protein of unknown function (DUF2871) 1 132 8.8E-48 T 11-10-2018 IPR021299 Protein of unknown function DUF2871 ATC04_07910 dad7be89a37a10e9bf711f838b72e5d8 196 Pfam PF09534 Tryptophan-associated transmembrane protein (Trp_oprn_chp) 12 192 4.3E-38 T 11-10-2018 IPR019051 Trp biosynthesis associated, transmembrane protein, Oprn/Chp ATC04_15310 09385e24fb40a1c86644ba9304e24eb6 422 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 388 421 5.2E-4 T 11-10-2018 ATC04_07375 a82aaa2ca5d026d34dbf58122e58811b 98 Pfam PF02325 YGGT family 8 88 1.2E-11 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 ATC04_09415 4e5464594d95b52b906152a402a91f31 289 Pfam PF11296 Protein of unknown function (DUF3097) 15 279 5.0E-113 T 11-10-2018 IPR021447 Protein of unknown function DUF3097 ATC04_16950 80c2185e76076b130e13bbf951dc7bdd 211 Pfam PF16316 Domain of unknown function (DUF4956) 11 178 3.2E-55 T 11-10-2018 IPR032531 Protein of unknown function DUF4956 ATC04_07600 cd66bbcbc56f3c1fa85eb1b3ee3f2f80 239 Pfam PF11361 Protein of unknown function (DUF3159) 43 227 7.1E-59 T 11-10-2018 IPR016566 Uncharacterised conserved protein UCP010219 ATC04_07600 cd66bbcbc56f3c1fa85eb1b3ee3f2f80 239 PIRSF PIRSF010219 18 238 4.7E-60 T 11-10-2018 IPR016566 Uncharacterised conserved protein UCP010219 ATC04_07760 8d43024d8a0a6c5f8c4db27371702b95 407 SUPERFAMILY SSF53474 135 399 5.36E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_07760 8d43024d8a0a6c5f8c4db27371702b95 407 Pfam PF12697 Alpha/beta hydrolase family 175 382 4.3E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ATC04_07760 8d43024d8a0a6c5f8c4db27371702b95 407 Gene3D G3DSA:3.40.50.1820 160 402 9.7E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ATC04_11720 d0fa2a3e9eaa9b21008f4d65cdad3d10 83 Pfam PF11238 Protein of unknown function (DUF3039) 27 81 6.8E-33 T 11-10-2018 IPR021400 Protein of unknown function DUF3039 ATC04_09955 6032da94ef0f39bdfeeb34877d3f45d1 136 Pfam PF06993 Protein of unknown function (DUF1304) 14 105 3.1E-13 T 11-10-2018 IPR009732 Protein of unknown function DUF1304 ATC04_06905 d5d08e05328de1f92fcac45122b9a851 73 Pfam PF11305 Protein of unknown function (DUF3107) 1 72 1.0E-28 T 11-10-2018 IPR021456 Protein of unknown function DUF3107