locus-tag class description NF551_00005 PF00308 Bacterial dnaA protein NF551_00005 PF08299 Bacterial dnaA protein helix-turn-helix NF551_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NF551_00010 PF02767 DNA polymerase III beta subunit, central domain NF551_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NF551_00020 PF02463 RecF/RecN/SMC N terminal domain NF551_00025 PF05258 Dna[CI] antecedent, DciA NF551_00030 PF00204 DNA gyrase B NF551_00030 PF00986 DNA gyrase B subunit, carboxyl terminus NF551_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_00030 PF01751 Toprim domain NF551_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A NF551_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller NF551_00040 PF12089 Transmembrane domain of unknown function (DUF3566) NF551_00070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NF551_00075 PF01694 Rhomboid family NF551_00080 PF06781 Cell division protein CrgA NF551_00085 PF04203 Sortase domain NF551_00095 PF00117 Glutamine amidotransferase class-I NF551_00100 PF03793 PASTA domain NF551_00100 PF00069 Protein kinase domain NF551_00105 PF00069 Protein kinase domain NF551_00110 PF00905 Penicillin binding protein transpeptidase domain NF551_00115 PF01098 Cell cycle protein NF551_00125 PF16697 Inner membrane component of T3SS, cytoplasmic domain NF551_00130 PF12401 Protein of unknown function (DUF2662) NF551_00130 PF00498 FHA domain NF551_00155 PF00210 Ferritin-like domain NF551_00180 PF02585 GlcNAc-PI de-N-acetylase NF551_00190 PF10944 Protein of unknown function (DUF2630) NF551_00200 PF02735 Ku70/Ku80 beta-barrel domain NF551_00205 PF08031 Berberine and berberine like NF551_00205 PF01565 FAD binding domain NF551_00210 PF00376 MerR family regulatory protein NF551_00210 PF09278 MerR, DNA binding NF551_00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NF551_00220 PF03466 LysR substrate binding domain NF551_00225 PF01810 LysE type translocator NF551_00235 PF00561 alpha/beta hydrolase fold NF551_00250 PF17964 Bacterial Ig domain NF551_00250 PF03734 L,D-transpeptidase catalytic domain NF551_00255 PF01757 Acyltransferase family NF551_00260 PF13460 NAD(P)H-binding NF551_00260 PF11066 Protein of unknown function (DUF2867) NF551_00265 PF13298 DNA polymerase Ligase (LigD) NF551_00265 PF01068 ATP dependent DNA ligase domain NF551_00265 PF04679 ATP dependent DNA ligase C terminal region NF551_00270 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase NF551_00270 PF09364 XFP N-terminal domain NF551_00270 PF09363 XFP C-terminal domain NF551_00285 PF00356 Bacterial regulatory proteins, lacI family NF551_00285 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NF551_00295 PF12697 Alpha/beta hydrolase family NF551_00300 PF00294 pfkB family carbohydrate kinase NF551_00310 PF01569 PAP2 superfamily NF551_00320 PF09924 Uncharacterised conserved protein (DUF2156) NF551_00335 PF02595 Glycerate kinase family NF551_00340 PF00860 Permease family NF551_00350 PF00171 Aldehyde dehydrogenase family NF551_00355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NF551_00355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NF551_00355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NF551_00355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NF551_00360 PF00005 ABC transporter NF551_00380 PF00854 POT family NF551_00385 PF01425 Amidase NF551_00390 PF00581 Rhodanese-like domain NF551_00395 PF00800 Prephenate dehydratase NF551_00410 PF00781 Diacylglycerol kinase catalytic domain NF551_00415 PF02403 Seryl-tRNA synthetase N-terminal domain NF551_00415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NF551_00430 PF00719 Inorganic pyrophosphatase NF551_00435 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NF551_00445 PF01171 PP-loop family NF551_00445 PF09179 TilS substrate binding domain NF551_00450 PF00156 Phosphoribosyl transferase domain NF551_00455 PF00004 ATPase family associated with various cellular activities (AAA) NF551_00455 PF17862 AAA+ lid domain NF551_00455 PF01434 Peptidase family M41 NF551_00460 PF01227 GTP cyclohydrolase I NF551_00465 PF00809 Pterin binding enzyme NF551_00470 PF02152 Dihydroneopterin aldolase NF551_00475 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NF551_00500 PF02569 Pantoate-beta-alanine ligase NF551_00505 PF00152 tRNA synthetases class II (D, K and N) NF551_00505 PF01336 OB-fold nucleic acid binding domain NF551_00520 PF10431 C-terminal, D2-small domain, of ClpB protein NF551_00520 PF02861 Clp amino terminal domain, pathogenicity island component NF551_00520 PF07724 AAA domain (Cdc48 subfamily) NF551_00520 PF00004 ATPase family associated with various cellular activities (AAA) NF551_00520 PF17871 AAA lid domain NF551_00525 PF00583 Acetyltransferase (GNAT) family NF551_00530 PF05532 CsbD-like NF551_00535 PF02733 Dak1 domain NF551_00540 PF02734 DAK2 domain NF551_00545 PF00391 PEP-utilising enzyme, mobile domain NF551_00545 PF00381 PTS HPr component phosphorylation site NF551_00545 PF05524 PEP-utilising enzyme, N-terminal NF551_00545 PF03610 PTS system fructose IIA component NF551_00550 PF00633 Helix-hairpin-helix motif NF551_00550 PF00730 HhH-GPD superfamily base excision DNA repair protein NF551_00560 PF02457 DisA bacterial checkpoint controller nucleotide-binding NF551_00560 PF00633 Helix-hairpin-helix motif NF551_00560 PF10635 DisA bacterial checkpoint controller linker region NF551_00565 PF18073 Rubredoxin metal binding domain NF551_00575 PF12849 PBP superfamily domain NF551_00580 PF00528 Binding-protein-dependent transport system inner membrane component NF551_00585 PF00528 Binding-protein-dependent transport system inner membrane component NF551_00590 PF00005 ABC transporter NF551_00595 PF01384 Phosphate transporter family NF551_00640 PF00381 PTS HPr component phosphorylation site NF551_00640 PF00391 PEP-utilising enzyme, mobile domain NF551_00640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NF551_00640 PF02896 PEP-utilising enzyme, TIM barrel domain NF551_00640 PF05524 PEP-utilising enzyme, N-terminal NF551_00645 PF02896 PEP-utilising enzyme, TIM barrel domain NF551_00645 PF05524 PEP-utilising enzyme, N-terminal NF551_00645 PF00391 PEP-utilising enzyme, mobile domain NF551_00650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NF551_00650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NF551_00655 PF00294 pfkB family carbohydrate kinase NF551_00665 PF04226 Transglycosylase associated protein NF551_00675 PF04286 Protein of unknown function (DUF445) NF551_00685 PF00723 Glycosyl hydrolases family 15 NF551_00695 PF00107 Zinc-binding dehydrogenase NF551_00695 PF13823 Alcohol dehydrogenase GroES-associated NF551_00695 PF08240 Alcohol dehydrogenase GroES-like domain NF551_00705 PF00871 Acetokinase family NF551_00710 PF07085 DRTGG domain NF551_00710 PF01515 Phosphate acetyl/butaryl transferase NF551_00715 PF13520 Amino acid permease NF551_00720 PF01910 Thiamine-binding protein NF551_00730 PF00860 Permease family NF551_00735 PF00582 Universal stress protein family NF551_00740 PF01545 Cation efflux family NF551_00765 PF07690 Major Facilitator Superfamily NF551_00810 PF09339 IclR helix-turn-helix domain NF551_00810 PF01614 Bacterial transcriptional regulator NF551_00815 PF01144 Coenzyme A transferase NF551_00820 PF01144 Coenzyme A transferase NF551_00825 PF02540 NAD synthase NF551_00830 PF00156 Phosphoribosyl transferase domain NF551_00840 PF13344 Haloacid dehalogenase-like hydrolase NF551_00850 PF01116 Fructose-bisphosphate aldolase class-II NF551_00870 PF00709 Adenylosuccinate synthetase NF551_00900 PF00011 Hsp20/alpha crystallin family NF551_00905 PF08240 Alcohol dehydrogenase GroES-like domain NF551_00905 PF00107 Zinc-binding dehydrogenase NF551_00910 PF00795 Carbon-nitrogen hydrolase NF551_00915 PF00324 Amino acid permease NF551_00930 PF13380 CoA binding domain NF551_00935 PF01053 Cys/Met metabolism PLP-dependent enzyme NF551_00945 PF16177 Acetyl-coenzyme A synthetase N-terminus NF551_00945 PF00501 AMP-binding enzyme NF551_00945 PF13193 AMP-binding enzyme C-terminal domain NF551_00950 PF00528 Binding-protein-dependent transport system inner membrane component NF551_00960 PF00005 ABC transporter NF551_00965 PF00296 Luciferase-like monooxygenase NF551_00990 PF13380 CoA binding domain NF551_01000 PF00005 ABC transporter NF551_01000 PF09383 NIL domain NF551_01005 PF00528 Binding-protein-dependent transport system inner membrane component NF551_01010 PF00296 Luciferase-like monooxygenase NF551_01015 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NF551_01015 PF02770 Acyl-CoA dehydrogenase, middle domain NF551_01015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NF551_01020 PF03180 NLPA lipoprotein NF551_01050 PF00586 AIR synthase related protein, N-terminal domain NF551_01050 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NF551_01050 PF02769 AIR synthase related protein, C-terminal domain NF551_01060 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase NF551_01085 PF02028 BCCT, betaine/carnitine/choline family transporter NF551_01090 PF01047 MarR family NF551_01105 PF13840 ACT domain NF551_01105 PF01842 ACT domain NF551_01105 PF00696 Amino acid kinase family NF551_01110 PF13662 Toprim domain NF551_01110 PF02132 RecR protein NF551_01115 PF12169 DNA polymerase III subunits gamma and tau domain III NF551_01150 PF06736 Protein of unknown function (DUF1211) NF551_01165 PF00005 ABC transporter NF551_01175 PF00072 Response regulator receiver domain NF551_01175 PF00196 Bacterial regulatory proteins, luxR family NF551_01180 PF13977 BetI-type transcriptional repressor, C-terminal NF551_01180 PF00440 Bacterial regulatory proteins, tetR family NF551_01195 PF13193 AMP-binding enzyme C-terminal domain NF551_01195 PF00501 AMP-binding enzyme NF551_01200 PF02801 Beta-ketoacyl synthase, C-terminal domain NF551_01200 PF00109 Beta-ketoacyl synthase, N-terminal domain NF551_01205 PF13462 Thioredoxin NF551_01205 PF06965 Na+/H+ antiporter 1 NF551_01250 PF01555 DNA methylase NF551_01280 PF02515 CoA-transferase family III NF551_01290 PF00005 ABC transporter NF551_01295 PF00528 Binding-protein-dependent transport system inner membrane component NF551_01330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NF551_01330 PF00205 Thiamine pyrophosphate enzyme, central domain NF551_01330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NF551_01335 PF00392 Bacterial regulatory proteins, gntR family NF551_01335 PF07729 FCD domain NF551_01340 PF01266 FAD dependent oxidoreductase NF551_01345 PF00083 Sugar (and other) transporter NF551_01350 PF13520 Amino acid permease NF551_01370 PF00890 FAD binding domain NF551_01385 PF12833 Helix-turn-helix domain NF551_01385 PF14525 AraC-binding-like domain NF551_01390 PF00743 Flavin-binding monooxygenase-like NF551_01395 PF13193 AMP-binding enzyme C-terminal domain NF551_01395 PF00501 AMP-binding enzyme NF551_01400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NF551_01400 PF02770 Acyl-CoA dehydrogenase, middle domain NF551_01400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NF551_01420 PF00884 Sulfatase NF551_01425 PF00107 Zinc-binding dehydrogenase NF551_01425 PF08240 Alcohol dehydrogenase GroES-like domain NF551_01430 PF00817 impB/mucB/samB family NF551_01430 PF11799 impB/mucB/samB family C-terminal domain NF551_01440 PF03466 LysR substrate binding domain NF551_01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NF551_01445 PF07969 Amidohydrolase family NF551_01450 PF00005 ABC transporter NF551_01455 PF00528 Binding-protein-dependent transport system inner membrane component NF551_01480 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus NF551_01480 PF05175 Methyltransferase small domain NF551_01495 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NF551_01540 PF00668 Condensation domain NF551_01540 PF13193 AMP-binding enzyme C-terminal domain NF551_01540 PF00501 AMP-binding enzyme NF551_01540 PF00975 Thioesterase domain NF551_01540 PF00550 Phosphopantetheine attachment site NF551_01545 PF00701 Dihydrodipicolinate synthetase family NF551_01565 PF01433 Peptidase family M1 domain NF551_01575 PF00324 Amino acid permease NF551_01580 PF01274 Malate synthase NF551_01585 PF00463 Isocitrate lyase family NF551_01590 PF01381 Helix-turn-helix NF551_01595 PF00557 Metallopeptidase family M24 NF551_01605 PF08281 Sigma-70, region 4 NF551_01605 PF12680 SnoaL-like domain NF551_01605 PF04542 Sigma-70 region 2 NF551_01610 PF06827 Zinc finger found in FPG and IleRS NF551_01610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NF551_01615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NF551_01620 PF01557 Fumarylacetoacetate (FAA) hydrolase family NF551_01630 PF01494 FAD binding domain NF551_01640 PF01557 Fumarylacetoacetate (FAA) hydrolase family NF551_01645 PF03466 LysR substrate binding domain NF551_01645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NF551_01650 PF02653 Branched-chain amino acid transport system / permease component NF551_01655 PF00005 ABC transporter NF551_01665 PF04151 Bacterial pre-peptidase C-terminal domain NF551_01665 PF00082 Subtilase family NF551_01665 PF05922 Peptidase inhibitor I9 NF551_01670 PF00355 Rieske [2Fe-2S] domain NF551_01675 PF00175 Oxidoreductase NAD-binding domain NF551_01675 PF00111 2Fe-2S iron-sulfur cluster binding domain NF551_01680 PF07690 Major Facilitator Superfamily NF551_01690 PF08543 Phosphomethylpyrimidine kinase NF551_01700 PF00440 Bacterial regulatory proteins, tetR family NF551_01700 PF17932 Tetracyclin repressor-like, C-terminal domain NF551_01710 PF01702 Queuine tRNA-ribosyltransferase NF551_01740 PF00106 short chain dehydrogenase NF551_01745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NF551_01745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NF551_01745 PF02770 Acyl-CoA dehydrogenase, middle domain NF551_01765 PF00849 RNA pseudouridylate synthase NF551_01770 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NF551_01770 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NF551_01775 PF00270 DEAD/DEAH box helicase NF551_01775 PF08494 DEAD/H associated NF551_01775 PF00271 Helicase conserved C-terminal domain NF551_01790 PF00474 Sodium:solute symporter family NF551_01800 PF02590 Predicted SPOUT methyltransferase NF551_01815 PF05661 Protein of unknown function (DUF808) NF551_01850 PF14437 MafB19-like deaminase NF551_01860 PF00486 Transcriptional regulatory protein, C terminal NF551_01860 PF00072 Response regulator receiver domain NF551_01870 PF00403 Heavy-metal-associated domain NF551_01870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NF551_01870 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_01880 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NF551_01880 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NF551_01905 PF10425 C-terminus of bacterial fibrinogen-binding adhesin NF551_01905 PF17210 SdrD B-like domain NF551_01905 PF00746 LPXTG cell wall anchor motif NF551_01905 PF17961 Bacterial Ig domain NF551_01905 PF04650 YSIRK type signal peptide NF551_01925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NF551_01925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NF551_01925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NF551_01925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NF551_01930 PF00270 DEAD/DEAH box helicase NF551_01930 PF00570 HRDC domain NF551_01930 PF09382 RQC domain NF551_01930 PF16124 RecQ zinc-binding NF551_01930 PF00271 Helicase conserved C-terminal domain NF551_01935 PF00392 Bacterial regulatory proteins, gntR family NF551_01935 PF07729 FCD domain NF551_01940 PF00378 Enoyl-CoA hydratase/isomerase NF551_01955 PF00248 Aldo/keto reductase family NF551_01965 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NF551_01965 PF00326 Prolyl oligopeptidase family NF551_01970 PF03458 UPF0126 domain NF551_01980 PF00196 Bacterial regulatory proteins, luxR family NF551_01980 PF00072 Response regulator receiver domain NF551_01985 PF07730 Histidine kinase NF551_02000 PF00005 ABC transporter NF551_02000 PF13732 Domain of unknown function (DUF4162) NF551_02015 PF00072 Response regulator receiver domain NF551_02015 PF00486 Transcriptional regulatory protein, C terminal NF551_02020 PF02702 Osmosensitive K+ channel His kinase sensor domain NF551_02020 PF13493 Domain of unknown function (DUF4118) NF551_02020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_02025 PF02669 K+-transporting ATPase, c chain NF551_02035 PF03814 Potassium-transporting ATPase A subunit NF551_02055 PF00171 Aldehyde dehydrogenase family NF551_02065 PF01175 Urocanase Rossmann-like domain NF551_02065 PF17392 Urocanase C-terminal domain NF551_02065 PF17391 Urocanase N-terminal domain NF551_02070 PF01546 Peptidase family M20/M25/M40 NF551_02070 PF07687 Peptidase dimerisation domain NF551_02080 PF01979 Amidohydrolase family NF551_02095 PF01551 Peptidase family M23 NF551_02105 PF00115 Cytochrome C and Quinol oxidase polypeptide I NF551_02110 PF08240 Alcohol dehydrogenase GroES-like domain NF551_02110 PF00107 Zinc-binding dehydrogenase NF551_02115 PF00561 alpha/beta hydrolase fold NF551_02115 PF00106 short chain dehydrogenase NF551_02135 PF14765 Polyketide synthase dehydratase NF551_02135 PF08659 KR domain NF551_02135 PF02801 Beta-ketoacyl synthase, C-terminal domain NF551_02135 PF00698 Acyl transferase domain NF551_02135 PF00109 Beta-ketoacyl synthase, N-terminal domain NF551_02135 PF08240 Alcohol dehydrogenase GroES-like domain NF551_02135 PF00107 Zinc-binding dehydrogenase NF551_02135 PF00550 Phosphopantetheine attachment site NF551_02135 PF16197 Ketoacyl-synthetase C-terminal extension NF551_02140 PF13722 5TM C-terminal transporter carbon starvation CstA NF551_02140 PF02554 Carbon starvation protein CstA NF551_02160 PF00248 Aldo/keto reductase family NF551_02165 PF02623 FliW protein NF551_02175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NF551_02175 PF00460 Flagella basal body rod protein NF551_02190 PF00700 Bacterial flagellin C-terminal helical region NF551_02190 PF00669 Bacterial flagellin N-terminal helical region NF551_02195 PF07195 Flagellar hook-associated protein 2 C-terminus NF551_02195 PF02465 Flagellar hook-associated protein 2 N-terminus NF551_02200 PF02561 Flagellar protein FliS NF551_02210 PF17755 UvrA DNA-binding domain NF551_02210 PF17760 UvrA interaction domain NF551_02210 PF00005 ABC transporter NF551_02220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NF551_02220 PF00460 Flagella basal body rod protein NF551_02225 PF02049 Flagellar hook-basal body complex protein FliE NF551_02230 PF08345 Flagellar M-ring protein C-terminal NF551_02230 PF01514 Secretory protein of YscJ/FliF family NF551_02235 PF14842 FliG N-terminal domain NF551_02235 PF14841 FliG middle domain NF551_02235 PF01706 FliG C-terminal domain NF551_02245 PF18269 T3SS EscN ATPase C-terminal domain NF551_02245 PF02874 ATP synthase alpha/beta family, beta-barrel domain NF551_02245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NF551_02255 PF00877 NlpC/P60 family NF551_02265 PF03963 Flagellar hook capping protein - N-terminal region NF551_02265 PF13861 FlgD Tudor-like domain NF551_02265 PF13860 FlgD Ig-like domain NF551_02270 PF07559 Flagellar basal body protein FlaE NF551_02270 PF00460 Flagella basal body rod protein NF551_02270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NF551_02280 PF01618 MotA/TolQ/ExbB proton channel family NF551_02285 PF13677 Membrane MotB of proton-channel complex MotA/MotB NF551_02285 PF00691 OmpA family NF551_02295 PF04509 CheC-like family NF551_02295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NF551_02305 PF00813 FliP family NF551_02310 PF01313 Bacterial export proteins, family 3 NF551_02315 PF01311 Bacterial export proteins, family 1 NF551_02320 PF01312 FlhB HrpN YscU SpaS Family NF551_02325 PF00771 FHIPEP family NF551_02335 PF02599 Global regulator protein family NF551_02345 PF00171 Aldehyde dehydrogenase family NF551_02360 PF00561 alpha/beta hydrolase fold NF551_02360 PF08386 TAP-like protein NF551_02365 PF12169 DNA polymerase III subunits gamma and tau domain III NF551_02370 PF02223 Thymidylate kinase NF551_02375 PF01053 Cys/Met metabolism PLP-dependent enzyme NF551_02390 PF00300 Histidine phosphatase superfamily (branch 1) NF551_02395 PF01895 PhoU domain NF551_02400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_02400 PF00512 His Kinase A (phospho-acceptor) domain NF551_02405 PF00072 Response regulator receiver domain NF551_02405 PF00486 Transcriptional regulatory protein, C terminal NF551_02415 PF02559 CarD-like/TRCF domain NF551_02420 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NF551_02425 PF02542 YgbB family NF551_02430 PF09190 DALR domain NF551_02430 PF01406 tRNA synthetases class I (C) catalytic domain NF551_02435 PF00588 SpoU rRNA Methylase family NF551_02435 PF08032 RNA 2'-O ribose methyltransferase substrate binding NF551_02440 PF00128 Alpha amylase, catalytic domain NF551_02440 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NF551_02445 PF11897 Protein of unknown function (DUF3417) NF551_02445 PF00343 Carbohydrate phosphorylase NF551_02450 PF11896 Domain of unknown function (DUF3416) NF551_02455 PF00128 Alpha amylase, catalytic domain NF551_02455 PF16657 Maltogenic Amylase, C-terminal domain NF551_02460 PF00128 Alpha amylase, catalytic domain NF551_02460 PF02806 Alpha amylase, C-terminal all-beta domain NF551_02460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NF551_02505 PF02913 FAD linked oxidases, C-terminal domain NF551_02505 PF01565 FAD binding domain NF551_02510 PF00128 Alpha amylase, catalytic domain NF551_02525 PF00005 ABC transporter NF551_02525 PF17912 MalK OB fold domain NF551_02530 PF02358 Trehalose-phosphatase NF551_02535 PF00982 Glycosyltransferase family 20 NF551_02565 PF13443 Cro/C1-type HTH DNA-binding domain NF551_02575 PF00392 Bacterial regulatory proteins, gntR family NF551_02575 PF07729 FCD domain NF551_02580 PF00682 HMGL-like NF551_02585 PF02515 CoA-transferase family III NF551_02590 PF05378 Hydantoinase/oxoprolinase N-terminal region NF551_02590 PF01968 Hydantoinase/oxoprolinase NF551_02595 PF02538 Hydantoinase B/oxoprolinase NF551_02600 PF00857 Isochorismatase family NF551_02605 PF00497 Bacterial extracellular solute-binding proteins, family 3 NF551_02615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NF551_02620 PF04303 PrpF protein NF551_02625 PF04909 Amidohydrolase NF551_02630 PF03737 Aldolase/RraA NF551_02645 PF03714 Bacterial pullanase-associated domain NF551_02645 PF02806 Alpha amylase, C-terminal all-beta domain NF551_02645 PF00128 Alpha amylase, catalytic domain NF551_02655 PF13462 Thioredoxin NF551_02655 PF06965 Na+/H+ antiporter 1 NF551_02695 PF00356 Bacterial regulatory proteins, lacI family NF551_02700 PF00128 Alpha amylase, catalytic domain NF551_02710 PF14785 Maltose transport system permease protein MalF P2 domain NF551_02710 PF00528 Binding-protein-dependent transport system inner membrane component NF551_02715 PF00528 Binding-protein-dependent transport system inner membrane component NF551_02720 PF00248 Aldo/keto reductase family NF551_02730 PF05235 CHAD domain NF551_02730 PF01928 CYTH domain NF551_02735 PF07690 Major Facilitator Superfamily NF551_02755 PF08021 Siderophore-interacting FAD-binding domain NF551_02755 PF04954 Siderophore-interacting protein NF551_02760 PF03167 Uracil DNA glycosylase superfamily NF551_02775 PF00313 'Cold-shock' DNA-binding domain NF551_02785 PF00118 TCP-1/cpn60 chaperonin family NF551_02795 PF00672 HAMP domain NF551_02795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_02795 PF00512 His Kinase A (phospho-acceptor) domain NF551_02800 PF00072 Response regulator receiver domain NF551_02800 PF00486 Transcriptional regulatory protein, C terminal NF551_02845 PF00313 'Cold-shock' DNA-binding domain NF551_02850 PF11228 Protein of unknown function (DUF3027) NF551_02860 PF00266 Aminotransferase class-V NF551_02865 PF18357 Diphteria toxin repressor SH3 domain NF551_02865 PF02742 Iron dependent repressor, metal binding and dimerisation domain NF551_02865 PF01325 Iron dependent repressor, N-terminal DNA binding domain NF551_02870 PF01551 Peptidase family M23 NF551_02870 PF10145 Phage-related minor tail protein NF551_02870 PF01464 Transglycosylase SLT domain NF551_02880 PF01476 LysM domain NF551_02880 PF00877 NlpC/P60 family NF551_02880 PF08239 Bacterial SH3 domain NF551_02890 PF12804 MobA-like NTP transferase domain NF551_02900 PF03454 MoeA C-terminal region (domain IV) NF551_02900 PF03453 MoeA N-terminal region (domain I and II) NF551_02900 PF00994 Probable molybdopterin binding domain NF551_02905 PF00384 Molybdopterin oxidoreductase NF551_02905 PF01568 Molydopterin dinucleotide binding domain NF551_02910 PF02634 FdhD/NarQ family NF551_02915 PF00672 HAMP domain NF551_02915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_02915 PF18698 Histidine kinase sensor domain NF551_02915 PF00512 His Kinase A (phospho-acceptor) domain NF551_02915 PF00989 PAS fold NF551_02920 PF00664 ABC transporter transmembrane region NF551_02920 PF00005 ABC transporter NF551_02925 PF08220 DeoR-like helix-turn-helix domain NF551_02925 PF00455 DeoR C terminal sensor domain NF551_02930 PF01116 Fructose-bisphosphate aldolase class-II NF551_02935 PF00294 pfkB family carbohydrate kinase NF551_02940 PF00480 ROK family NF551_02950 PF01547 Bacterial extracellular solute-binding protein NF551_02955 PF00528 Binding-protein-dependent transport system inner membrane component NF551_02960 PF00528 Binding-protein-dependent transport system inner membrane component NF551_02985 PF00459 Inositol monophosphatase family NF551_02990 PF00580 UvrD/REP helicase N-terminal domain NF551_02990 PF13361 UvrD-like helicase C-terminal domain NF551_02995 PF08442 ATP-grasp domain NF551_02995 PF00549 CoA-ligase NF551_03000 PF02629 CoA binding domain NF551_03000 PF00549 CoA-ligase NF551_03005 PF00083 Sugar (and other) transporter NF551_03020 PF08240 Alcohol dehydrogenase GroES-like domain NF551_03020 PF13823 Alcohol dehydrogenase GroES-associated NF551_03020 PF00107 Zinc-binding dehydrogenase NF551_03030 PF07690 Major Facilitator Superfamily NF551_03040 PF00501 AMP-binding enzyme NF551_03040 PF13193 AMP-binding enzyme C-terminal domain NF551_03045 PF01594 AI-2E family transporter NF551_03050 PF01381 Helix-turn-helix NF551_03050 PF07883 Cupin domain NF551_03060 PF01494 FAD binding domain NF551_03065 PF00491 Arginase family NF551_03070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NF551_03070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NF551_03070 PF00205 Thiamine pyrophosphate enzyme, central domain NF551_03075 PF00999 Sodium/hydrogen exchanger family NF551_03080 PF01494 FAD binding domain NF551_03090 PF02797 Chalcone and stilbene synthases, C-terminal domain NF551_03090 PF00195 Chalcone and stilbene synthases, N-terminal domain NF551_03095 PF00083 Sugar (and other) transporter NF551_03105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NF551_03105 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NF551_03110 PF00171 Aldehyde dehydrogenase family NF551_03125 PF00205 Thiamine pyrophosphate enzyme, central domain NF551_03125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NF551_03125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NF551_03130 PF16921 Tex protein YqgF-like domain NF551_03130 PF17674 HHH domain NF551_03130 PF00575 S1 RNA binding domain NF551_03130 PF09371 Tex-like protein N-terminal domain NF551_03140 PF13419 Haloacid dehalogenase-like hydrolase NF551_03145 PF03852 DNA mismatch endonuclease Vsr NF551_03150 PF00710 Asparaginase, N-terminal NF551_03150 PF17763 Glutaminase/Asparaginase C-terminal domain NF551_03165 PF00890 FAD binding domain NF551_03175 PF00294 pfkB family carbohydrate kinase NF551_03180 PF01156 Inosine-uridine preferring nucleoside hydrolase NF551_03190 PF03358 NADPH-dependent FMN reductase NF551_03195 PF04199 Putative cyclase NF551_03200 PF00205 Thiamine pyrophosphate enzyme, central domain NF551_03200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NF551_03200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NF551_03215 PF12419 SNF2 Helicase protein NF551_03215 PF00271 Helicase conserved C-terminal domain NF551_03215 PF00176 SNF2 family N-terminal domain NF551_03220 PF01925 Sulfite exporter TauE/SafE NF551_03225 PF17773 UPF0176 acylphosphatase like domain NF551_03230 PF01925 Sulfite exporter TauE/SafE NF551_03235 PF00753 Metallo-beta-lactamase superfamily NF551_03240 PF01202 Shikimate kinase NF551_03245 PF02447 GntP family permease NF551_03255 PF08240 Alcohol dehydrogenase GroES-like domain NF551_03255 PF00107 Zinc-binding dehydrogenase NF551_03270 PF03976 Polyphosphate kinase 2 (PPK2) NF551_03285 PF00583 Acetyltransferase (GNAT) family NF551_03290 PF04075 F420H(2)-dependent quinone reductase NF551_03295 PF00749 tRNA synthetases class I (E and Q), catalytic domain NF551_03300 PF00296 Luciferase-like monooxygenase NF551_03305 PF14437 MafB19-like deaminase NF551_03310 PF00753 Metallo-beta-lactamase superfamily NF551_03360 PF08534 Redoxin NF551_03390 PF13407 Periplasmic binding protein domain NF551_03395 PF00005 ABC transporter NF551_03400 PF02653 Branched-chain amino acid transport system / permease component NF551_03410 PF11954 Domain of unknown function (DUF3471) NF551_03410 PF00144 Beta-lactamase NF551_03415 PF07687 Peptidase dimerisation domain NF551_03415 PF01546 Peptidase family M20/M25/M40 NF551_03420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NF551_03425 PF00528 Binding-protein-dependent transport system inner membrane component NF551_03430 PF12911 N-terminal TM domain of oligopeptide transport permease C NF551_03430 PF00528 Binding-protein-dependent transport system inner membrane component NF551_03435 PF00005 ABC transporter NF551_03435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NF551_03440 PF02016 LD-carboxypeptidase N-terminal domain NF551_03440 PF17676 LD-carboxypeptidase C-terminal domain NF551_03445 PF00144 Beta-lactamase NF551_03445 PF11954 Domain of unknown function (DUF3471) NF551_03455 PF13378 Enolase C-terminal domain-like NF551_03455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NF551_03460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NF551_03460 PF00205 Thiamine pyrophosphate enzyme, central domain NF551_03460 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NF551_03465 PF00270 DEAD/DEAH box helicase NF551_03465 PF00271 Helicase conserved C-terminal domain NF551_03485 PF09015 NgoMIV restriction enzyme NF551_03490 PF00145 C-5 cytosine-specific DNA methylase NF551_03500 PF07729 FCD domain NF551_03500 PF00392 Bacterial regulatory proteins, gntR family NF551_03510 PF01070 FMN-dependent dehydrogenase NF551_03520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NF551_03520 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_03530 PF05368 NmrA-like family NF551_03535 PF02311 AraC-like ligand binding domain NF551_03535 PF12833 Helix-turn-helix domain NF551_03545 PF07691 PA14 domain NF551_03545 PF01915 Glycosyl hydrolase family 3 C-terminal domain NF551_03545 PF00933 Glycosyl hydrolase family 3 N terminal domain NF551_03545 PF14310 Fibronectin type III-like domain NF551_03550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NF551_03565 PF01425 Amidase NF551_03570 PF04371 Porphyromonas-type peptidyl-arginine deiminase NF551_03575 PF01979 Amidohydrolase family NF551_03600 PF00892 EamA-like transporter family NF551_03605 PF01047 MarR family NF551_03615 PF02872 5'-nucleotidase, C-terminal domain NF551_03615 PF00149 Calcineurin-like phosphoesterase NF551_03620 PF01494 FAD binding domain NF551_03620 PF07976 Phenol hydroxylase, C-terminal dimerisation domain NF551_03625 PF00654 Voltage gated chloride channel NF551_03630 PF08240 Alcohol dehydrogenase GroES-like domain NF551_03630 PF00107 Zinc-binding dehydrogenase NF551_03635 PF01266 FAD dependent oxidoreductase NF551_03635 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NF551_03640 PF01325 Iron dependent repressor, N-terminal DNA binding domain NF551_03640 PF00480 ROK family NF551_03645 PF01261 Xylose isomerase-like TIM barrel NF551_03650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NF551_03650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NF551_03655 PF01263 Aldose 1-epimerase NF551_03660 PF00528 Binding-protein-dependent transport system inner membrane component NF551_03665 PF00528 Binding-protein-dependent transport system inner membrane component NF551_03670 PF13416 Bacterial extracellular solute-binding protein NF551_03675 PF00107 Zinc-binding dehydrogenase NF551_03675 PF13823 Alcohol dehydrogenase GroES-associated NF551_03675 PF08240 Alcohol dehydrogenase GroES-like domain NF551_03690 PF00144 Beta-lactamase NF551_03700 PF05448 Acetyl xylan esterase (AXE1) NF551_03705 PF00933 Glycosyl hydrolase family 3 N terminal domain NF551_03705 PF14310 Fibronectin type III-like domain NF551_03705 PF01915 Glycosyl hydrolase family 3 C-terminal domain NF551_03710 PF00528 Binding-protein-dependent transport system inner membrane component NF551_03715 PF00528 Binding-protein-dependent transport system inner membrane component NF551_03720 PF01547 Bacterial extracellular solute-binding protein NF551_03725 PF00356 Bacterial regulatory proteins, lacI family NF551_03730 PF07690 Major Facilitator Superfamily NF551_03745 PF08240 Alcohol dehydrogenase GroES-like domain NF551_03745 PF00107 Zinc-binding dehydrogenase NF551_03770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NF551_03770 PF03466 LysR substrate binding domain NF551_03775 PF08946 Osmosensory transporter coiled coil NF551_03775 PF00083 Sugar (and other) transporter NF551_03780 PF01546 Peptidase family M20/M25/M40 NF551_03785 PF01425 Amidase NF551_03790 PF01370 NAD dependent epimerase/dehydratase family NF551_03800 PF00248 Aldo/keto reductase family NF551_03805 PF00171 Aldehyde dehydrogenase family NF551_03815 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NF551_03825 PF00294 pfkB family carbohydrate kinase NF551_03830 PF00206 Lyase NF551_03830 PF14698 Argininosuccinate lyase C-terminal NF551_03835 PF00528 Binding-protein-dependent transport system inner membrane component NF551_03840 PF08402 TOBE domain NF551_03840 PF00005 ABC transporter NF551_03850 PF00480 ROK family NF551_03860 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NF551_03865 PF00083 Sugar (and other) transporter NF551_03865 PF07690 Major Facilitator Superfamily NF551_03875 PF02426 Muconolactone delta-isomerase NF551_03880 PF03737 Aldolase/RraA NF551_03885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_03885 PF13185 GAF domain NF551_03885 PF07730 Histidine kinase NF551_03890 PF00072 Response regulator receiver domain NF551_03890 PF00196 Bacterial regulatory proteins, luxR family NF551_03900 PF00551 Formyl transferase NF551_03900 PF01842 ACT domain NF551_03905 PF01571 Aminomethyltransferase folate-binding domain NF551_03910 PF02913 FAD linked oxidases, C-terminal domain NF551_03910 PF01565 FAD binding domain NF551_03915 PF00072 Response regulator receiver domain NF551_03915 PF00196 Bacterial regulatory proteins, luxR family NF551_03925 PF00392 Bacterial regulatory proteins, gntR family NF551_03925 PF07702 UTRA domain NF551_03930 PF02652 L-lactate permease NF551_03935 PF02754 Cysteine-rich domain NF551_03940 PF02589 LUD domain NF551_03940 PF11870 Domain of unknown function (DUF3390) NF551_03940 PF13183 4Fe-4S dicluster domain NF551_03945 PF02589 LUD domain NF551_03950 PF01571 Aminomethyltransferase folate-binding domain NF551_03960 PF02219 Methylenetetrahydrofolate reductase NF551_03970 PF00135 Carboxylesterase family NF551_03975 PF01557 Fumarylacetoacetate (FAA) hydrolase family NF551_03980 PF03328 HpcH/HpaI aldolase/citrate lyase family NF551_03985 PF00005 ABC transporter NF551_03990 PF12399 Branched-chain amino acid ATP-binding cassette transporter NF551_03990 PF00005 ABC transporter NF551_04000 PF02653 Branched-chain amino acid transport system / permease component NF551_04005 PF13458 Periplasmic binding protein NF551_04010 PF02652 L-lactate permease NF551_04020 PF06912 Protein of unknown function (DUF1275) NF551_04035 PF00056 lactate/malate dehydrogenase, NAD binding domain NF551_04035 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NF551_04040 PF00795 Carbon-nitrogen hydrolase NF551_04045 PF00171 Aldehyde dehydrogenase family NF551_04055 PF01266 FAD dependent oxidoreductase NF551_04065 PF00202 Aminotransferase class-III NF551_04070 PF00171 Aldehyde dehydrogenase family NF551_04080 PF08240 Alcohol dehydrogenase GroES-like domain NF551_04080 PF00107 Zinc-binding dehydrogenase NF551_04085 PF13732 Domain of unknown function (DUF4162) NF551_04085 PF00005 ABC transporter NF551_04095 PF01266 FAD dependent oxidoreductase NF551_04100 PF00202 Aminotransferase class-III NF551_04115 PF00005 ABC transporter NF551_04115 PF08402 TOBE domain NF551_04120 PF00528 Binding-protein-dependent transport system inner membrane component NF551_04125 PF00528 Binding-protein-dependent transport system inner membrane component NF551_04140 PF00296 Luciferase-like monooxygenase NF551_04155 PF00313 'Cold-shock' DNA-binding domain NF551_04160 PF04960 Glutaminase NF551_04160 PF00027 Cyclic nucleotide-binding domain NF551_04165 PF00313 'Cold-shock' DNA-binding domain NF551_04175 PF00069 Protein kinase domain NF551_04185 PF13823 Alcohol dehydrogenase GroES-associated NF551_04185 PF08240 Alcohol dehydrogenase GroES-like domain NF551_04185 PF00107 Zinc-binding dehydrogenase NF551_04195 PF01774 UreD urease accessory protein NF551_04200 PF02492 CobW/HypB/UreG, nucleotide-binding domain NF551_04210 PF01979 Amidohydrolase family NF551_04210 PF00449 Urease alpha-subunit, N-terminal domain NF551_04215 PF00699 Urease beta subunit NF551_04220 PF00547 Urease, gamma subunit NF551_04230 PF00149 Calcineurin-like phosphoesterase NF551_04240 PF00199 Catalase NF551_04240 PF06628 Catalase-related immune-responsive NF551_04250 PF00171 Aldehyde dehydrogenase family NF551_04255 PF07722 Peptidase C26 NF551_04260 PF00120 Glutamine synthetase, catalytic domain NF551_04265 PF13520 Amino acid permease NF551_04270 PF00392 Bacterial regulatory proteins, gntR family NF551_04270 PF07729 FCD domain NF551_04275 PF17101 Stealth protein CR1, conserved region 1 NF551_04275 PF11380 Stealth protein CR2, conserved region 2 NF551_04275 PF17102 Stealth protein CR3, conserved region 3 NF551_04275 PF17103 Stealth protein CR4, conserved region 4 NF551_04325 PF00551 Formyl transferase NF551_04330 PF07690 Major Facilitator Superfamily NF551_04335 PF01808 AICARFT/IMPCHase bienzyme NF551_04335 PF02142 MGS-like domain NF551_04340 PF00180 Isocitrate/isopropylmalate dehydrogenase NF551_04360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NF551_04360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NF551_04365 PF13407 Periplasmic binding protein domain NF551_04370 PF02653 Branched-chain amino acid transport system / permease component NF551_04375 PF00005 ABC transporter NF551_04380 PF01047 MarR family NF551_04380 PF00480 ROK family NF551_04385 PF00132 Bacterial transferase hexapeptide (six repeats) NF551_04390 PF00551 Formyl transferase NF551_04400 PF00464 Serine hydroxymethyltransferase NF551_04405 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NF551_04405 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NF551_04410 PF00005 ABC transporter NF551_04425 PF00072 Response regulator receiver domain NF551_04425 PF00196 Bacterial regulatory proteins, luxR family NF551_04440 PF01661 Macro domain NF551_04455 PF00579 tRNA synthetases class I (W and Y) NF551_04470 PF13085 2Fe-2S iron-sulfur cluster binding domain NF551_04475 PF02910 Fumarate reductase flavoprotein C-term NF551_04475 PF00890 FAD binding domain NF551_04485 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NF551_04490 PF01050 Mannose-6-phosphate isomerase NF551_04490 PF00483 Nucleotidyl transferase NF551_04495 PF01546 Peptidase family M20/M25/M40 NF551_04495 PF04107 Glutamate-cysteine ligase family 2(GCS2) NF551_04500 PF02608 ABC transporter substrate-binding protein PnrA-like NF551_04505 PF00005 ABC transporter NF551_04510 PF02653 Branched-chain amino acid transport system / permease component NF551_04515 PF02653 Branched-chain amino acid transport system / permease component NF551_04520 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NF551_04525 PF02885 Glycosyl transferase family, helical bundle domain NF551_04525 PF00591 Glycosyl transferase family, a/b domain NF551_04525 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NF551_04535 PF00962 Adenosine/AMP deaminase NF551_04540 PF03819 MazG nucleotide pyrophosphohydrolase domain NF551_04545 PF00113 Enolase, C-terminal TIM barrel domain NF551_04545 PF03952 Enolase, N-terminal domain NF551_04560 PF02541 Ppx/GppA phosphatase family NF551_04565 PF00082 Subtilase family NF551_04580 PF13458 Periplasmic binding protein NF551_04585 PF00005 ABC transporter NF551_04590 PF00005 ABC transporter NF551_04590 PF12399 Branched-chain amino acid ATP-binding cassette transporter NF551_04595 PF02653 Branched-chain amino acid transport system / permease component NF551_04595 PF11862 Domain of unknown function (DUF3382) NF551_04600 PF02653 Branched-chain amino acid transport system / permease component NF551_04615 PF01263 Aldose 1-epimerase NF551_04620 PF01594 AI-2E family transporter NF551_04625 PF13291 ACT domain NF551_04625 PF00291 Pyridoxal-phosphate dependent enzyme NF551_04630 PF01694 Rhomboid family NF551_04635 PF01272 Transcription elongation factor, GreA/GreB, C-term NF551_04635 PF03449 Transcription elongation factor, N-terminal NF551_04645 PF02585 GlcNAc-PI de-N-acetylase NF551_04655 PF03190 Protein of unknown function, DUF255 NF551_04660 PF03006 Haemolysin-III related NF551_04665 PF01255 Putative undecaprenyl diphosphate synthase NF551_04670 PF06912 Protein of unknown function (DUF1275) NF551_04675 PF02562 PhoH-like protein NF551_04675 PF13638 PIN domain NF551_04685 PF13344 Haloacid dehalogenase-like hydrolase NF551_04685 PF00293 NUDIX domain NF551_04690 PF07690 Major Facilitator Superfamily NF551_04695 PF00440 Bacterial regulatory proteins, tetR family NF551_04700 PF00206 Lyase NF551_04700 PF10415 Fumarase C C-terminus NF551_04705 PF00484 Carbonic anhydrase NF551_04715 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NF551_04730 PF01238 Phosphomannose isomerase type I NF551_04735 PF03816 Cell envelope-related transcriptional attenuator domain NF551_04740 PF00731 AIR carboxylase NF551_04745 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NF551_04745 PF02222 ATP-grasp domain NF551_04760 PF02467 Transcription factor WhiB NF551_04765 PF00534 Glycosyl transferases group 1 NF551_04765 PF00535 Glycosyl transferase family 2 NF551_04790 PF05221 S-adenosyl-L-homocysteine hydrolase NF551_04790 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NF551_04810 PF00501 AMP-binding enzyme NF551_04815 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase NF551_04815 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NF551_04820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NF551_04825 PF00171 Aldehyde dehydrogenase family NF551_04830 PF01841 Transglutaminase-like superfamily NF551_04830 PF13559 Domain of unknown function (DUF4129) NF551_04830 PF11992 Domain of unknown function (DUF3488) NF551_04840 PF17863 AAA lid domain NF551_04840 PF07726 ATPase family associated with various cellular activities (AAA) NF551_04845 PF01026 TatD related DNase NF551_04865 PF00398 Ribosomal RNA adenine dimethylase NF551_04870 PF00288 GHMP kinases N terminal domain NF551_04870 PF08544 GHMP kinases C terminal NF551_04875 PF16326 ABC transporter C-terminal domain NF551_04875 PF12848 ABC transporter NF551_04875 PF00005 ABC transporter NF551_04880 PF00293 NUDIX domain NF551_04895 PF00132 Bacterial transferase hexapeptide (six repeats) NF551_04895 PF12804 MobA-like NTP transferase domain NF551_04900 PF14572 Phosphoribosyl synthetase-associated domain NF551_04900 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NF551_04905 PF01386 Ribosomal L25p family NF551_04905 PF14693 Ribosomal protein TL5, C-terminal domain NF551_04910 PF01195 Peptidyl-tRNA hydrolase NF551_04920 PF00196 Bacterial regulatory proteins, luxR family NF551_04920 PF00072 Response regulator receiver domain NF551_04925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NF551_04925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NF551_04930 PF16363 GDP-mannose 4,6 dehydratase NF551_04935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NF551_04945 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NF551_04950 PF01943 Polysaccharide biosynthesis protein NF551_05005 PF03808 Glycosyl transferase WecB/TagA/CpsF family NF551_05010 PF00132 Bacterial transferase hexapeptide (six repeats) NF551_05025 PF00196 Bacterial regulatory proteins, luxR family NF551_05030 PF02397 Bacterial sugar transferase NF551_05035 PF00266 Aminotransferase class-V NF551_05040 PF01592 NifU-like N terminal domain NF551_05045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_05045 PF00512 His Kinase A (phospho-acceptor) domain NF551_05045 PF00989 PAS fold NF551_05045 PF16736 Single Cache-like NF551_05050 PF00486 Transcriptional regulatory protein, C terminal NF551_05050 PF00072 Response regulator receiver domain NF551_05060 PF00171 Aldehyde dehydrogenase family NF551_05095 PF06965 Na+/H+ antiporter 1 NF551_05115 PF04389 Peptidase family M28 NF551_05115 PF02225 PA domain NF551_05120 PF02559 CarD-like/TRCF domain NF551_05120 PF00270 DEAD/DEAH box helicase NF551_05120 PF00271 Helicase conserved C-terminal domain NF551_05120 PF03461 TRCF domain NF551_05120 PF17757 UvrB interaction domain NF551_05130 PF01266 FAD dependent oxidoreductase NF551_05135 PF00171 Aldehyde dehydrogenase family NF551_05140 PF04101 Glycosyltransferase family 28 C-terminal domain NF551_05150 PF08402 TOBE domain NF551_05150 PF00005 ABC transporter NF551_05155 PF00528 Binding-protein-dependent transport system inner membrane component NF551_05160 PF00528 Binding-protein-dependent transport system inner membrane component NF551_05165 PF13416 Bacterial extracellular solute-binding protein NF551_05190 PF01791 DeoC/LacD family aldolase NF551_05210 PF00563 EAL domain NF551_05210 PF00990 Diguanylate cyclase, GGDEF domain NF551_05210 PF03707 Bacterial signalling protein N terminal repeat NF551_05215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NF551_05215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NF551_05215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NF551_05215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NF551_05220 PF01048 Phosphorylase superfamily NF551_05225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NF551_05225 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_05230 PF07690 Major Facilitator Superfamily NF551_05230 PF00083 Sugar (and other) transporter NF551_05235 PF02785 Biotin carboxylase C-terminal domain NF551_05235 PF00289 Biotin carboxylase, N-terminal domain NF551_05235 PF00364 Biotin-requiring enzyme NF551_05235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NF551_05245 PF02545 Maf-like protein NF551_05250 PF00375 Sodium:dicarboxylate symporter family NF551_05265 PF01039 Carboxyl transferase domain NF551_05275 PF02237 Biotin protein ligase C terminal domain NF551_05275 PF03099 Biotin/lipoate A/B protein ligase family NF551_05275 PF08279 HTH domain NF551_05285 PF16701 Adenylate cyclase regulatory domain NF551_05285 PF00211 Adenylate and Guanylate cyclase catalytic domain NF551_05295 PF07726 ATPase family associated with various cellular activities (AAA) NF551_05295 PF17863 AAA lid domain NF551_05320 PF13191 AAA ATPase domain NF551_05320 PF00069 Protein kinase domain NF551_05345 PF01580 FtsK/SpoIIIE family NF551_05350 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NF551_05420 PF04542 Sigma-70 region 2 NF551_05420 PF08281 Sigma-70, region 4 NF551_05430 PF00533 BRCA1 C Terminus (BRCT) domain NF551_05430 PF01653 NAD-dependent DNA ligase adenylation domain NF551_05430 PF03120 NAD-dependent DNA ligase OB-fold domain NF551_05430 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NF551_05430 PF12826 Helix-hairpin-helix motif NF551_05435 PF00459 Inositol monophosphatase family NF551_05445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NF551_05450 PF00528 Binding-protein-dependent transport system inner membrane component NF551_05455 PF12911 N-terminal TM domain of oligopeptide transport permease C NF551_05455 PF00528 Binding-protein-dependent transport system inner membrane component NF551_05460 PF00005 ABC transporter NF551_05460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NF551_05465 PF00005 ABC transporter NF551_05475 PF01258 Prokaryotic dksA/traR C4-type zinc finger NF551_05485 PF02686 Glu-tRNAGln amidotransferase C subunit NF551_05490 PF01425 Amidase NF551_05495 PF02934 GatB/GatE catalytic domain NF551_05495 PF02637 GatB domain NF551_05515 PF01266 FAD dependent oxidoreductase NF551_05525 PF00708 Acylphosphatase NF551_05530 PF00221 Aromatic amino acid lyase NF551_05540 PF16355 Domain of unknown function (DUF4982) NF551_05540 PF00703 Glycosyl hydrolases family 2 NF551_05540 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NF551_05540 PF02837 Glycosyl hydrolases family 2, sugar binding domain NF551_05555 PF01053 Cys/Met metabolism PLP-dependent enzyme NF551_05560 PF00561 alpha/beta hydrolase fold NF551_05580 PF01479 S4 domain NF551_05580 PF00579 tRNA synthetases class I (W and Y) NF551_05590 PF03239 Iron permease FTR1 family NF551_05595 PF13473 Cupredoxin-like domain NF551_05595 PF09375 Imelysin NF551_05600 PF04261 Dyp-type peroxidase family NF551_05600 PF10518 TAT (twin-arginine translocation) pathway signal sequence NF551_05615 PF03129 Anticodon binding domain NF551_05615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NF551_05630 PF01207 Dihydrouridine synthase (Dus) NF551_05635 PF01966 HD domain NF551_05635 PF13286 Phosphohydrolase-associated domain NF551_05640 PF08275 DNA primase catalytic core, N-terminal domain NF551_05640 PF13662 Toprim domain NF551_05640 PF01807 CHC2 zinc finger NF551_05640 PF10410 DnaB-helicase binding domain of primase NF551_05640 PF08278 DNA primase DnaG DnaB-binding NF551_05655 PF00390 Malic enzyme, N-terminal domain NF551_05655 PF03949 Malic enzyme, NAD binding domain NF551_05660 PF00083 Sugar (and other) transporter NF551_05670 PF01066 CDP-alcohol phosphatidyltransferase NF551_05680 PF08323 Starch synthase catalytic domain NF551_05690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NF551_05690 PF02770 Acyl-CoA dehydrogenase, middle domain NF551_05690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NF551_05700 PF00318 Ribosomal protein S2 NF551_05705 PF00889 Elongation factor TS NF551_05710 PF00696 Amino acid kinase family NF551_05715 PF01765 Ribosome recycling factor NF551_05730 PF00474 Sodium:solute symporter family NF551_05740 PF00072 Response regulator receiver domain NF551_05740 PF04397 LytTr DNA-binding domain NF551_05745 PF07694 5TMR of 5TMR-LYT NF551_05745 PF06580 Histidine kinase NF551_05755 PF00474 Sodium:solute symporter family NF551_05760 PF01037 Lrp/AsnC ligand binding domain NF551_05765 PF00676 Dehydrogenase E1 component NF551_05770 PF02779 Transketolase, pyrimidine binding domain NF551_05770 PF02780 Transketolase, C-terminal domain NF551_05775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NF551_05775 PF00364 Biotin-requiring enzyme NF551_05775 PF02817 e3 binding domain NF551_05785 PF00440 Bacterial regulatory proteins, tetR family NF551_05790 PF01039 Carboxyl transferase domain NF551_05795 PF02785 Biotin carboxylase C-terminal domain NF551_05795 PF00289 Biotin carboxylase, N-terminal domain NF551_05795 PF00364 Biotin-requiring enzyme NF551_05795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NF551_05800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NF551_05800 PF02770 Acyl-CoA dehydrogenase, middle domain NF551_05800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NF551_05810 PF01144 Coenzyme A transferase NF551_05820 PF03328 HpcH/HpaI aldolase/citrate lyase family NF551_05830 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NF551_05830 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NF551_05830 PF13288 DXP reductoisomerase C-terminal domain NF551_05835 PF02163 Peptidase family M50 NF551_05835 PF17820 PDZ domain NF551_05855 PF04551 GcpE protein NF551_05870 PF03129 Anticodon binding domain NF551_05870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NF551_05870 PF04073 Aminoacyl-tRNA editing domain NF551_05875 PF01925 Sulfite exporter TauE/SafE NF551_05890 PF02576 RimP N-terminal domain NF551_05890 PF17384 RimP C-terminal SH3 domain NF551_05895 PF13184 NusA-like KH domain NF551_05895 PF08529 NusA N-terminal domain NF551_05905 PF00009 Elongation factor Tu GTP binding domain NF551_05905 PF11987 Translation-initiation factor 2 NF551_05905 PF04760 Translation initiation factor IF-2, N-terminal region NF551_05910 PF02033 Ribosome-binding factor A NF551_05920 PF00155 Aminotransferase class I and II NF551_05925 PF16198 tRNA pseudouridylate synthase B C-terminal domain NF551_05925 PF01509 TruB family pseudouridylate synthase (N terminal domain) NF551_05925 PF09142 tRNA Pseudouridine synthase II, C terminal NF551_05945 PF06574 FAD synthetase NF551_05945 PF01687 Riboflavin kinase NF551_05950 PF00312 Ribosomal protein S15 NF551_05955 PF00013 KH domain NF551_05955 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NF551_05955 PF01138 3' exoribonuclease family, domain 1 NF551_05955 PF00575 S1 RNA binding domain NF551_05960 PF00675 Insulinase (Peptidase family M16) NF551_05960 PF05193 Peptidase M16 inactive domain NF551_05970 PF04055 Radical SAM superfamily NF551_05970 PF06463 Molybdenum Cofactor Synthesis C NF551_05975 PF00174 Oxidoreductase molybdopterin binding domain NF551_05985 PF00994 Probable molybdopterin binding domain NF551_05985 PF03454 MoeA C-terminal region (domain IV) NF551_05985 PF03453 MoeA N-terminal region (domain I and II) NF551_05990 PF01967 MoaC family NF551_05995 PF00994 Probable molybdopterin binding domain NF551_06000 PF02391 MoaE protein NF551_06005 PF01113 Dihydrodipicolinate reductase, N-terminus NF551_06005 PF05173 Dihydrodipicolinate reductase, C-terminus NF551_06015 PF07690 Major Facilitator Superfamily NF551_06025 PF00701 Dihydrodipicolinate synthetase family NF551_06030 PF12706 Beta-lactamase superfamily domain NF551_06030 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NF551_06030 PF17770 Ribonuclease J C-terminal domain NF551_06035 PF09397 Ftsk gamma domain NF551_06035 PF17854 FtsK alpha domain NF551_06035 PF01580 FtsK/SpoIIIE family NF551_06040 PF01066 CDP-alcohol phosphatidyltransferase NF551_06045 PF02464 Competence-damaged protein NF551_06045 PF18146 Damage-inducible protein CinA KH domain NF551_06045 PF00994 Probable molybdopterin binding domain NF551_06065 PF00154 recA bacterial DNA recombination protein NF551_06070 PF02631 RecX family NF551_06085 PF04055 Radical SAM superfamily NF551_06085 PF00919 Uncharacterized protein family UPF0004 NF551_06095 PF01678 Diaminopimelate epimerase NF551_06100 PF05175 Methyltransferase small domain NF551_06105 PF16360 GTP-binding GTPase Middle Region NF551_06105 PF13167 GTP-binding GTPase N-terminal NF551_06105 PF01926 50S ribosome-binding GTPase NF551_06110 PF13307 Helicase C-terminal domain NF551_06115 PF01726 LexA DNA binding domain NF551_06115 PF00717 Peptidase S24-like NF551_06125 PF00155 Aminotransferase class I and II NF551_06130 PF00475 Imidazoleglycerol-phosphate dehydratase NF551_06135 PF00117 Glutamine amidotransferase class-I NF551_06145 PF00977 Histidine biosynthesis protein NF551_06165 PF05198 Translation initiation factor IF-3, N-terminal domain NF551_06165 PF00707 Translation initiation factor IF-3, C-terminal domain NF551_06170 PF01632 Ribosomal protein L35 NF551_06175 PF00453 Ribosomal protein L20 NF551_06180 PF08032 RNA 2'-O ribose methyltransferase substrate binding NF551_06180 PF00588 SpoU rRNA Methylase family NF551_06185 PF07690 Major Facilitator Superfamily NF551_06190 PF09297 NADH pyrophosphatase zinc ribbon domain NF551_06190 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NF551_06190 PF00293 NUDIX domain NF551_06205 PF04055 Radical SAM superfamily NF551_06215 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NF551_06215 PF01409 tRNA synthetases class II core domain (F) NF551_06220 PF03147 Ferredoxin-fold anticodon binding domain NF551_06220 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NF551_06220 PF03484 tRNA synthetase B5 domain NF551_06220 PF03483 B3/4 domain NF551_06220 PF01588 Putative tRNA binding domain NF551_06235 PF13443 Cro/C1-type HTH DNA-binding domain NF551_06245 PF08240 Alcohol dehydrogenase GroES-like domain NF551_06245 PF00107 Zinc-binding dehydrogenase NF551_06250 PF02774 Semialdehyde dehydrogenase, dimerisation domain NF551_06250 PF01118 Semialdehyde dehydrogenase, NAD binding domain NF551_06255 PF01960 ArgJ family NF551_06260 PF00696 Amino acid kinase family NF551_06265 PF00202 Aminotransferase class-III NF551_06270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NF551_06270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NF551_06275 PF01316 Arginine repressor, DNA binding domain NF551_06275 PF02863 Arginine repressor, C-terminal domain NF551_06280 PF00764 Arginosuccinate synthase NF551_06285 PF14698 Argininosuccinate lyase C-terminal NF551_06285 PF00206 Lyase NF551_06290 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NF551_06290 PF01243 Pyridoxamine 5'-phosphate oxidase NF551_06295 PF01970 Tripartite tricarboxylate transporter TctA family NF551_06305 PF03401 Tripartite tricarboxylate transporter family receptor NF551_06320 PF02245 Methylpurine-DNA glycosylase (MPG) NF551_06325 PF00156 Phosphoribosyl transferase domain NF551_06335 PF00579 tRNA synthetases class I (W and Y) NF551_06365 PF18407 GCN5-related N-acetyltransferase like domain NF551_06365 PF13344 Haloacid dehalogenase-like hydrolase NF551_06375 PF01479 S4 domain NF551_06375 PF01728 FtsJ-like methyltransferase NF551_06380 PF01513 ATP-NAD kinase NF551_06385 PF02463 RecF/RecN/SMC N terminal domain NF551_06390 PF06418 CTP synthase N-terminus NF551_06390 PF00117 Glutamine amidotransferase class-I NF551_06395 PF00293 NUDIX domain NF551_06400 PF02899 Phage integrase, N-terminal SAM-like domain NF551_06400 PF00589 Phage integrase family NF551_06405 PF01047 MarR family NF551_06410 PF01494 FAD binding domain NF551_06415 PF00293 NUDIX domain NF551_06430 PF00285 Citrate synthase, C-terminal domain NF551_06440 PF03972 MmgE/PrpD family NF551_06445 PF07729 FCD domain NF551_06445 PF00392 Bacterial regulatory proteins, gntR family NF551_06450 PF16177 Acetyl-coenzyme A synthetase N-terminus NF551_06450 PF00501 AMP-binding enzyme NF551_06450 PF13193 AMP-binding enzyme C-terminal domain NF551_06455 PF00072 Response regulator receiver domain NF551_06460 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NF551_06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_06460 PF17203 Single cache domain 3 NF551_06460 PF00989 PAS fold NF551_06465 PF00375 Sodium:dicarboxylate symporter family NF551_06475 PF13614 AAA domain NF551_06480 PF02616 Segregation and condensation protein ScpA NF551_06485 PF04079 Segregation and condensation complex subunit ScpB NF551_06490 PF00849 RNA pseudouridylate synthase NF551_06490 PF01479 S4 domain NF551_06495 PF02153 Prephenate dehydrogenase NF551_06500 PF02224 Cytidylate kinase NF551_06505 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NF551_06505 PF01926 50S ribosome-binding GTPase NF551_06520 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_06565 PF07995 Glucose / Sorbosone dehydrogenase NF551_06570 PF01494 FAD binding domain NF551_06590 PF13977 BetI-type transcriptional repressor, C-terminal NF551_06590 PF00440 Bacterial regulatory proteins, tetR family NF551_06595 PF07731 Multicopper oxidase NF551_06595 PF07732 Multicopper oxidase NF551_06600 PF00106 short chain dehydrogenase NF551_06605 PF00072 Response regulator receiver domain NF551_06605 PF00196 Bacterial regulatory proteins, luxR family NF551_06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_06610 PF07730 Histidine kinase NF551_06615 PF00005 ABC transporter NF551_06625 PF16697 Inner membrane component of T3SS, cytoplasmic domain NF551_06630 PF00376 MerR family regulatory protein NF551_06635 PF02577 Bifunctional nuclease NF551_06640 PF13411 MerR HTH family regulatory protein NF551_06650 PF00289 Biotin carboxylase, N-terminal domain NF551_06650 PF02785 Biotin carboxylase C-terminal domain NF551_06650 PF00364 Biotin-requiring enzyme NF551_06650 PF02436 Conserved carboxylase domain NF551_06650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NF551_06650 PF00682 HMGL-like NF551_06655 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_06655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NF551_06660 PF00501 AMP-binding enzyme NF551_06665 PF00480 ROK family NF551_06675 PF12146 Serine aminopeptidase, S33 NF551_06680 PF01553 Acyltransferase NF551_06685 PF01474 Class-II DAHP synthetase family NF551_06690 PF00069 Protein kinase domain NF551_06690 PF03793 PASTA domain NF551_06695 PF01476 LysM domain NF551_06695 PF05257 CHAP domain NF551_06705 PF00348 Polyprenyl synthetase NF551_06715 PF11799 impB/mucB/samB family C-terminal domain NF551_06715 PF00817 impB/mucB/samB family NF551_06725 PF02381 MraZ protein, putative antitoxin-like NF551_06730 PF01795 MraW methylase family NF551_06740 PF00905 Penicillin binding protein transpeptidase domain NF551_06740 PF03717 Penicillin-binding Protein dimerisation domain NF551_06745 PF02875 Mur ligase family, glutamate ligase domain NF551_06745 PF01225 Mur ligase family, catalytic domain NF551_06745 PF08245 Mur ligase middle domain NF551_06750 PF08245 Mur ligase middle domain NF551_06750 PF01225 Mur ligase family, catalytic domain NF551_06750 PF02875 Mur ligase family, glutamate ligase domain NF551_06755 PF00953 Glycosyl transferase family 4 NF551_06760 PF08245 Mur ligase middle domain NF551_06760 PF02875 Mur ligase family, glutamate ligase domain NF551_06765 PF01098 Cell cycle protein NF551_06770 PF04101 Glycosyltransferase family 28 C-terminal domain NF551_06770 PF03033 Glycosyltransferase family 28 N-terminal domain NF551_06775 PF01225 Mur ligase family, catalytic domain NF551_06775 PF02875 Mur ligase family, glutamate ligase domain NF551_06775 PF08245 Mur ligase middle domain NF551_06780 PF08478 POTRA domain, FtsQ-type NF551_06785 PF12327 FtsZ family, C-terminal domain NF551_06785 PF00091 Tubulin/FtsZ family, GTPase domain NF551_06790 PF02578 Multi-copper polyphenol oxidoreductase laccase NF551_06795 PF01168 Alanine racemase, N-terminal domain NF551_06800 PF04472 Cell division protein SepF NF551_06810 PF05103 DivIVA protein NF551_06815 PF01252 Signal peptidase (SPase) II NF551_06820 PF00849 RNA pseudouridylate synthase NF551_06825 PF07733 Bacterial DNA polymerase III alpha NTPase domain NF551_06825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NF551_06825 PF14579 Helix-hairpin-helix motif NF551_06825 PF02811 PHP domain NF551_06830 PF00815 Histidinol dehydrogenase NF551_06835 PF03477 ATP cone domain NF551_06840 PF00480 ROK family NF551_06845 PF00557 Metallopeptidase family M24 NF551_06855 PF02548 Ketopantoate hydroxymethyltransferase NF551_06860 PF00120 Glutamine synthetase, catalytic domain NF551_06860 PF03951 Glutamine synthetase, beta-Grasp domain NF551_06865 PF08335 GlnD PII-uridylyltransferase NF551_06865 PF03710 Glutamate-ammonia ligase adenylyltransferase NF551_06870 PF00528 Binding-protein-dependent transport system inner membrane component NF551_06875 PF00005 ABC transporter NF551_06880 PF00144 Beta-lactamase NF551_06885 PF00120 Glutamine synthetase, catalytic domain NF551_06885 PF03951 Glutamine synthetase, beta-Grasp domain NF551_06900 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NF551_06900 PF04055 Radical SAM superfamily NF551_06905 PF03099 Biotin/lipoate A/B protein ligase family NF551_06915 PF07676 WD40-like Beta Propeller Repeat NF551_06915 PF03572 Peptidase family S41 NF551_06915 PF14684 Tricorn protease C1 domain NF551_06915 PF14685 Tricorn protease PDZ domain NF551_06925 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NF551_06930 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NF551_06940 PF03824 High-affinity nickel-transport protein NF551_06945 PF01774 UreD urease accessory protein NF551_06950 PF02492 CobW/HypB/UreG, nucleotide-binding domain NF551_06955 PF01730 UreF NF551_06960 PF00449 Urease alpha-subunit, N-terminal domain NF551_06960 PF01979 Amidohydrolase family NF551_06965 PF00699 Urease beta subunit NF551_06975 PF00547 Urease, gamma subunit NF551_06980 PF02566 OsmC-like protein NF551_06990 PF02817 e3 binding domain NF551_06990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NF551_06990 PF00364 Biotin-requiring enzyme NF551_06995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NF551_06995 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_07000 PF02789 Cytosol aminopeptidase family, N-terminal domain NF551_07000 PF00883 Cytosol aminopeptidase family, catalytic domain NF551_07010 PF07690 Major Facilitator Superfamily NF551_07020 PF04542 Sigma-70 region 2 NF551_07020 PF04539 Sigma-70 region 3 NF551_07020 PF00140 Sigma-70 factor, region 1.2 NF551_07020 PF04545 Sigma-70, region 4 NF551_07030 PF00986 DNA gyrase B subunit, carboxyl terminus NF551_07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_07030 PF01751 Toprim domain NF551_07030 PF00204 DNA gyrase B NF551_07035 PF01435 Peptidase family M48 NF551_07045 PF01654 Cytochrome bd terminal oxidase subunit I NF551_07050 PF02322 Cytochrome bd terminal oxidase subunit II NF551_07055 PF00664 ABC transporter transmembrane region NF551_07055 PF00005 ABC transporter NF551_07070 PF02583 Metal-sensitive transcriptional repressor NF551_07080 PF00403 Heavy-metal-associated domain NF551_07085 PF00521 DNA gyrase/topoisomerase IV, subunit A NF551_07085 PF03989 DNA gyrase C-terminal domain, beta-propeller NF551_07105 PF00265 Thymidine kinase NF551_07110 PF11268 Protein of unknown function (DUF3071) NF551_07125 PF00692 dUTPase NF551_07145 PF02254 TrkA-N domain NF551_07145 PF02080 TrkA-C domain NF551_07150 PF02080 TrkA-C domain NF551_07150 PF02254 TrkA-N domain NF551_07155 PF01938 TRAM domain NF551_07155 PF05958 tRNA (Uracil-5-)-methyltransferase NF551_07160 PF00694 Aconitase C-terminal domain NF551_07160 PF00330 Aconitase family (aconitate hydratase) NF551_07165 PF02779 Transketolase, pyrimidine binding domain NF551_07165 PF02780 Transketolase, C-terminal domain NF551_07165 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NF551_07180 PF00248 Aldo/keto reductase family NF551_07190 PF13350 Tyrosine phosphatase family NF551_07195 PF00149 Calcineurin-like phosphoesterase NF551_07205 PF00528 Binding-protein-dependent transport system inner membrane component NF551_07210 PF00005 ABC transporter NF551_07210 PF08402 TOBE domain NF551_07215 PF00300 Histidine phosphatase superfamily (branch 1) NF551_07235 PF17755 UvrA DNA-binding domain NF551_07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_07245 PF00512 His Kinase A (phospho-acceptor) domain NF551_07245 PF00672 HAMP domain NF551_07250 PF00486 Transcriptional regulatory protein, C terminal NF551_07250 PF00072 Response regulator receiver domain NF551_07260 PF02595 Glycerate kinase family NF551_07265 PF01872 RibD C-terminal domain NF551_07270 PF01022 Bacterial regulatory protein, arsR family NF551_07275 PF01758 Sodium Bile acid symporter family NF551_07280 PF01451 Low molecular weight phosphotyrosine protein phosphatase NF551_07300 PF00378 Enoyl-CoA hydratase/isomerase NF551_07300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NF551_07300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NF551_07305 PF00108 Thiolase, N-terminal domain NF551_07305 PF02803 Thiolase, C-terminal domain NF551_07310 PF01595 Cyclin M transmembrane N-terminal domain NF551_07310 PF00571 CBS domain NF551_07315 PF00571 CBS domain NF551_07315 PF01595 Cyclin M transmembrane N-terminal domain NF551_07315 PF03471 Transporter associated domain NF551_07320 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_07325 PF04542 Sigma-70 region 2 NF551_07325 PF08281 Sigma-70, region 4 NF551_07325 PF12680 SnoaL-like domain NF551_07330 PF01612 3'-5' exonuclease NF551_07330 PF00570 HRDC domain NF551_07340 PF01212 Beta-eliminating lyase NF551_07360 PF16658 Class II release factor RF3, C-terminal domain NF551_07360 PF00009 Elongation factor Tu GTP binding domain NF551_07365 PF00108 Thiolase, N-terminal domain NF551_07365 PF02803 Thiolase, C-terminal domain NF551_07380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NF551_07380 PF02874 ATP synthase alpha/beta family, beta-barrel domain NF551_07385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NF551_07385 PF02874 ATP synthase alpha/beta family, beta-barrel domain NF551_07385 PF16886 ATPsynthase alpha/beta subunit N-term extension NF551_07405 PF01496 V-type ATPase 116kDa subunit family NF551_07420 PF01641 SelR domain NF551_07450 PF04073 Aminoacyl-tRNA editing domain NF551_07455 PF02657 Fe-S metabolism associated domain NF551_07460 PF00581 Rhodanese-like domain NF551_07520 PF01327 Polypeptide deformylase NF551_07525 PF00551 Formyl transferase NF551_07525 PF02911 Formyl transferase, C-terminal domain NF551_07530 PF01029 NusB family NF551_07530 PF01189 16S rRNA methyltransferase RsmB/F NF551_07535 PF00834 Ribulose-phosphate 3 epimerase family NF551_07545 PF00005 ABC transporter NF551_07545 PF12848 ABC transporter NF551_07555 PF01872 RibD C-terminal domain NF551_07555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NF551_07560 PF00677 Lumazine binding domain NF551_07565 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NF551_07565 PF00925 GTP cyclohydrolase II NF551_07570 PF00925 GTP cyclohydrolase II NF551_07575 PF00885 6,7-dimethyl-8-ribityllumazine synthase NF551_07585 PF07690 Major Facilitator Superfamily NF551_07595 PF04542 Sigma-70 region 2 NF551_07595 PF08281 Sigma-70, region 4 NF551_07600 PF03795 YCII-related domain NF551_07615 PF13460 NAD(P)H-binding NF551_07635 PF00583 Acetyltransferase (GNAT) family NF551_07655 PF00583 Acetyltransferase (GNAT) family NF551_07655 PF13508 Acetyltransferase (GNAT) domain NF551_07660 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NF551_07665 PF01634 ATP phosphoribosyltransferase NF551_07665 PF08029 HisG, C-terminal domain NF551_07670 PF00977 Histidine biosynthesis protein NF551_07675 PF00144 Beta-lactamase NF551_07685 PF01502 Phosphoribosyl-AMP cyclohydrolase NF551_07690 PF00425 chorismate binding enzyme NF551_07690 PF04715 Anthranilate synthase component I, N terminal region NF551_07705 PF00218 Indole-3-glycerol phosphate synthase NF551_07710 PF00291 Pyridoxal-phosphate dependent enzyme NF551_07715 PF00290 Tryptophan synthase alpha chain NF551_07720 PF01790 Prolipoprotein diacylglyceryl transferase NF551_07725 PF00310 Glutamine amidotransferases class-II NF551_07725 PF01493 GXGXG motif NF551_07725 PF04898 Glutamate synthase central domain NF551_07725 PF01645 Conserved region in glutamate synthase NF551_07730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NF551_07730 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_07735 PF00224 Pyruvate kinase, barrel domain NF551_07735 PF02887 Pyruvate kinase, alpha/beta domain NF551_07740 PF03861 ANTAR domain NF551_07740 PF00072 Response regulator receiver domain NF551_07755 PF01367 5'-3' exonuclease, C-terminal SAM fold NF551_07755 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NF551_07760 PF00106 short chain dehydrogenase NF551_07765 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_07765 PF13192 Thioredoxin domain NF551_07780 PF00480 ROK family NF551_07785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NF551_07785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NF551_07790 PF00939 Sodium:sulfate symporter transmembrane region NF551_07795 PF00180 Isocitrate/isopropylmalate dehydrogenase NF551_07800 PF00875 DNA photolyase NF551_07800 PF03441 FAD binding domain of DNA photolyase NF551_07805 PF07976 Phenol hydroxylase, C-terminal dimerisation domain NF551_07805 PF01494 FAD binding domain NF551_07815 PF00664 ABC transporter transmembrane region NF551_07815 PF00005 ABC transporter NF551_07820 PF00583 Acetyltransferase (GNAT) family NF551_07835 PF00155 Aminotransferase class I and II NF551_07840 PF05175 Methyltransferase small domain NF551_07840 PF17827 PrmC N-terminal domain NF551_07845 PF03459 TOBE domain NF551_07855 PF00528 Binding-protein-dependent transport system inner membrane component NF551_07860 PF00005 ABC transporter NF551_07860 PF03459 TOBE domain NF551_07865 PF00072 Response regulator receiver domain NF551_07865 PF00486 Transcriptional regulatory protein, C terminal NF551_07870 PF00512 His Kinase A (phospho-acceptor) domain NF551_07870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_07870 PF00672 HAMP domain NF551_07880 PF01636 Phosphotransferase enzyme family NF551_07885 PF03180 NLPA lipoprotein NF551_07890 PF09383 NIL domain NF551_07890 PF00005 ABC transporter NF551_07895 PF00528 Binding-protein-dependent transport system inner membrane component NF551_07900 PF00271 Helicase conserved C-terminal domain NF551_07900 PF04408 Helicase associated domain (HA2) NF551_07900 PF08482 ATP-dependent helicase C-terminal NF551_07900 PF00270 DEAD/DEAH box helicase NF551_07905 PF02559 CarD-like/TRCF domain NF551_07910 PF08239 Bacterial SH3 domain NF551_07910 PF00877 NlpC/P60 family NF551_07910 PF01476 LysM domain NF551_07915 PF00753 Metallo-beta-lactamase superfamily NF551_07935 PF00005 ABC transporter NF551_07940 PF01032 FecCD transport family NF551_07955 PF02386 Cation transport protein NF551_07960 PF02080 TrkA-C domain NF551_07960 PF02254 TrkA-N domain NF551_07965 PF02583 Metal-sensitive transcriptional repressor NF551_07975 PF00245 Alkaline phosphatase NF551_07980 PF01300 Telomere recombination NF551_08000 PF04679 ATP dependent DNA ligase C terminal region NF551_08000 PF01068 ATP dependent DNA ligase domain NF551_08000 PF13298 DNA polymerase Ligase (LigD) NF551_08005 PF00881 Nitroreductase family NF551_08010 PF00535 Glycosyl transferase family 2 NF551_08020 PF13649 Methyltransferase domain NF551_08025 PF01553 Acyltransferase NF551_08030 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NF551_08030 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NF551_08035 PF08544 GHMP kinases C terminal NF551_08035 PF00288 GHMP kinases N terminal domain NF551_08035 PF10509 Galactokinase galactose-binding signature NF551_08045 PF00135 Carboxylesterase family NF551_08050 PF00005 ABC transporter NF551_08060 PF00135 Carboxylesterase family NF551_08065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NF551_08065 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_08075 PF00809 Pterin binding enzyme NF551_08080 PF01068 ATP dependent DNA ligase domain NF551_08080 PF04679 ATP dependent DNA ligase C terminal region NF551_08085 PF03061 Thioesterase superfamily NF551_08090 PF07690 Major Facilitator Superfamily NF551_08095 PF00933 Glycosyl hydrolase family 3 N terminal domain NF551_08095 PF01915 Glycosyl hydrolase family 3 C-terminal domain NF551_08095 PF14310 Fibronectin type III-like domain NF551_08100 PF03109 ABC1 family NF551_08105 PF00083 Sugar (and other) transporter NF551_08105 PF07690 Major Facilitator Superfamily NF551_08110 PF08501 Shikimate dehydrogenase substrate binding domain NF551_08110 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NF551_08115 PF01261 Xylose isomerase-like TIM barrel NF551_08115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NF551_08120 PF09339 IclR helix-turn-helix domain NF551_08120 PF01614 Bacterial transcriptional regulator NF551_08125 PF04960 Glutaminase NF551_08130 PF13520 Amino acid permease NF551_08135 PF00282 Pyridoxal-dependent decarboxylase conserved domain NF551_08140 PF00011 Hsp20/alpha crystallin family NF551_08150 PF03061 Thioesterase superfamily NF551_08155 PF01367 5'-3' exonuclease, C-terminal SAM fold NF551_08155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NF551_08155 PF00476 DNA polymerase family A NF551_08165 PF00575 S1 RNA binding domain NF551_08175 PF00356 Bacterial regulatory proteins, lacI family NF551_08180 PF00232 Glycosyl hydrolase family 1 NF551_08185 PF00528 Binding-protein-dependent transport system inner membrane component NF551_08190 PF00528 Binding-protein-dependent transport system inner membrane component NF551_08200 PF05175 Methyltransferase small domain NF551_08200 PF08468 Methyltransferase small domain N-terminal NF551_08205 PF01205 Uncharacterized protein family UPF0029 NF551_08205 PF09186 Domain of unknown function (DUF1949) NF551_08210 PF04229 GrpB protein NF551_08210 PF01121 Dephospho-CoA kinase NF551_08215 PF17757 UvrB interaction domain NF551_08215 PF12344 Ultra-violet resistance protein B NF551_08215 PF00271 Helicase conserved C-terminal domain NF551_08215 PF02151 UvrB/uvrC motif NF551_08215 PF04851 Type III restriction enzyme, res subunit NF551_08235 PF00561 alpha/beta hydrolase fold NF551_08245 PF00270 DEAD/DEAH box helicase NF551_08245 PF08148 DSHCT (NUC185) domain NF551_08245 PF00271 Helicase conserved C-terminal domain NF551_08255 PF00753 Metallo-beta-lactamase superfamily NF551_08260 PF00664 ABC transporter transmembrane region NF551_08260 PF00005 ABC transporter NF551_08265 PF00005 ABC transporter NF551_08265 PF00664 ABC transporter transmembrane region NF551_08275 PF00005 ABC transporter NF551_08275 PF17755 UvrA DNA-binding domain NF551_08275 PF17760 UvrA interaction domain NF551_08280 PF13419 Haloacid dehalogenase-like hydrolase NF551_08290 PF01541 GIY-YIG catalytic domain NF551_08290 PF12826 Helix-hairpin-helix motif NF551_08290 PF02151 UvrB/uvrC motif NF551_08290 PF08459 UvrC Helix-hairpin-helix N-terminal NF551_08295 PF03668 P-loop ATPase protein family NF551_08300 PF01933 Uncharacterised protein family UPF0052 NF551_08305 PF02650 WhiA C-terminal HTH domain NF551_08305 PF14527 WhiA LAGLIDADG-like domain NF551_08305 PF10298 WhiA N-terminal LAGLIDADG-like domain NF551_08310 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NF551_08310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NF551_08315 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NF551_08315 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NF551_08320 PF00162 Phosphoglycerate kinase NF551_08325 PF00121 Triosephosphate isomerase NF551_08330 PF03840 Preprotein translocase SecG subunit NF551_08335 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NF551_08345 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NF551_08345 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NF551_08350 PF00342 Phosphoglucose isomerase NF551_08355 PF00923 Transaldolase/Fructose-6-phosphate aldolase NF551_08360 PF02780 Transketolase, C-terminal domain NF551_08360 PF02779 Transketolase, pyrimidine binding domain NF551_08360 PF00456 Transketolase, thiamine diphosphate binding domain NF551_08365 PF01040 UbiA prenyltransferase family NF551_08370 PF02628 Cytochrome oxidase assembly protein NF551_08380 PF00005 ABC transporter NF551_08390 PF01458 Uncharacterized protein family (UPF0051) NF551_08395 PF01458 Uncharacterized protein family (UPF0051) NF551_08400 PF00005 ABC transporter NF551_08405 PF01883 Iron-sulfur cluster assembly protein NF551_08415 PF00005 ABC transporter NF551_08420 PF02632 BioY family NF551_08425 PF00005 ABC transporter NF551_08425 PF16326 ABC transporter C-terminal domain NF551_08425 PF12848 ABC transporter NF551_08460 PF00005 ABC transporter NF551_08470 PF00588 SpoU rRNA Methylase family NF551_08480 PF01197 Ribosomal protein L31 NF551_08485 PF03099 Biotin/lipoate A/B protein ligase family NF551_08485 PF10437 Bacterial lipoate protein ligase C-terminus NF551_08495 PF11838 ERAP1-like C-terminal domain NF551_08495 PF01433 Peptidase family M1 domain NF551_08505 PF03601 Conserved hypothetical protein 698 NF551_08510 PF00690 Cation transporter/ATPase, N-terminus NF551_08510 PF00689 Cation transporting ATPase, C-terminus NF551_08515 PF00106 short chain dehydrogenase NF551_08525 PF00534 Glycosyl transferases group 1 NF551_08525 PF13439 Glycosyltransferase Family 4 NF551_08540 PF00108 Thiolase, N-terminal domain NF551_08540 PF02803 Thiolase, C-terminal domain NF551_08555 PF00266 Aminotransferase class-V NF551_08560 PF00582 Universal stress protein family NF551_08570 PF00571 CBS domain NF551_08570 PF03471 Transporter associated domain NF551_08570 PF01595 Cyclin M transmembrane N-terminal domain NF551_08580 PF07687 Peptidase dimerisation domain NF551_08580 PF01546 Peptidase family M20/M25/M40 NF551_08600 PF02673 Bacitracin resistance protein BacA NF551_08605 PF01406 tRNA synthetases class I (C) catalytic domain NF551_08615 PF13419 Haloacid dehalogenase-like hydrolase NF551_08620 PF00571 CBS domain NF551_08620 PF02163 Peptidase family M50 NF551_08625 PF08704 tRNA methyltransferase complex GCD14 subunit NF551_08630 PF00004 ATPase family associated with various cellular activities (AAA) NF551_08630 PF16450 Proteasomal ATPase OB C-terminal domain NF551_08630 PF17758 Proteasomal ATPase OB N-terminal domain NF551_08635 PF03136 Pup-ligase protein NF551_08640 PF05639 Pup-like protein NF551_08645 PF00227 Proteasome subunit NF551_08650 PF00227 Proteasome subunit NF551_08655 PF03136 Pup-ligase protein NF551_08665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NF551_08670 PF13280 WYL domain NF551_08680 PF02416 mttA/Hcf106 family NF551_08685 PF00902 Sec-independent protein translocase protein (TatC) NF551_08690 PF00270 DEAD/DEAH box helicase NF551_08690 PF08148 DSHCT (NUC185) domain NF551_08690 PF00271 Helicase conserved C-terminal domain NF551_08700 PF00535 Glycosyl transferase family 2 NF551_08705 PF13397 RNA polymerase-binding protein NF551_08710 PF01145 SPFH domain / Band 7 family NF551_08725 PF07676 WD40-like Beta Propeller Repeat NF551_08725 PF00326 Prolyl oligopeptidase family NF551_08730 PF01327 Polypeptide deformylase NF551_08775 PF00106 short chain dehydrogenase NF551_08780 PF00135 Carboxylesterase family NF551_08805 PF00005 ABC transporter NF551_08825 PF00591 Glycosyl transferase family, a/b domain NF551_08825 PF02885 Glycosyl transferase family, helical bundle domain NF551_08830 PF00510 Cytochrome c oxidase subunit III NF551_08835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NF551_08835 PF00034 Cytochrome c NF551_08840 PF00355 Rieske [2Fe-2S] domain NF551_08845 PF13631 Cytochrome b(N-terminal)/b6/petB NF551_08855 PF00392 Bacterial regulatory proteins, gntR family NF551_08855 PF07702 UTRA domain NF551_08860 PF12270 Cytochrome c oxidase subunit IV NF551_08865 PF00115 Cytochrome C and Quinol oxidase polypeptide I NF551_08870 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NF551_08875 PF01521 Iron-sulphur cluster biosynthesis NF551_08880 PF07687 Peptidase dimerisation domain NF551_08880 PF01546 Peptidase family M20/M25/M40 NF551_08885 PF11241 Protein of unknown function (DUF3043) NF551_08890 PF01180 Dihydroorotate dehydrogenase NF551_08900 PF01255 Putative undecaprenyl diphosphate synthase NF551_08905 PF02565 Recombination protein O C terminal NF551_08905 PF11967 Recombination protein O N terminal NF551_08910 PF00682 HMGL-like NF551_08910 PF08502 LeuA allosteric (dimerisation) domain NF551_08915 PF13399 LytR cell envelope-related transcriptional attenuator NF551_08915 PF03816 Cell envelope-related transcriptional attenuator domain NF551_08920 PF07650 KH domain NF551_08920 PF01926 50S ribosome-binding GTPase NF551_08925 PF01595 Cyclin M transmembrane N-terminal domain NF551_08925 PF00571 CBS domain NF551_08925 PF03471 Transporter associated domain NF551_08930 PF02130 Uncharacterized protein family UPF0054 NF551_08935 PF02562 PhoH-like protein NF551_08945 PF04452 RNA methyltransferase NF551_08950 PF00226 DnaJ domain NF551_08950 PF01556 DnaJ C terminal domain NF551_08950 PF00684 DnaJ central domain NF551_08955 PF01628 HrcA protein C terminal domain NF551_08955 PF08220 DeoR-like helix-turn-helix domain NF551_08970 PF04055 Radical SAM superfamily NF551_08975 PF06421 GTP-binding protein LepA C-terminus NF551_08975 PF00679 Elongation factor G C-terminus NF551_08975 PF00009 Elongation factor Tu GTP binding domain NF551_08985 PF01649 Ribosomal protein S20 NF551_09030 PF02645 Uncharacterised protein, DegV family COG1307 NF551_09035 PF09334 tRNA synthetases class I (M) NF551_09035 PF00133 tRNA synthetases class I (I, L, M and V) NF551_09035 PF08264 Anticodon-binding domain of tRNA NF551_09035 PF13603 Leucyl-tRNA synthetase, Domain 2 NF551_09040 PF04542 Sigma-70 region 2 NF551_09040 PF08281 Sigma-70, region 4 NF551_09045 PF01370 NAD dependent epimerase/dehydratase family NF551_09050 PF01758 Sodium Bile acid symporter family NF551_09060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NF551_09060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NF551_09065 PF00230 Major intrinsic protein NF551_09070 PF00248 Aldo/keto reductase family NF551_09075 PF00561 alpha/beta hydrolase fold NF551_09080 PF13439 Glycosyltransferase Family 4 NF551_09085 PF16884 N-terminal domain of oxidoreductase NF551_09085 PF00107 Zinc-binding dehydrogenase NF551_09095 PF17764 3′ DNA-binding domain (3′BD) NF551_09100 PF02773 S-adenosylmethionine synthetase, C-terminal domain NF551_09100 PF02772 S-adenosylmethionine synthetase, central domain NF551_09100 PF00438 S-adenosylmethionine synthetase, N-terminal domain NF551_09105 PF04127 DNA / pantothenate metabolism flavoprotein NF551_09105 PF02441 Flavoprotein NF551_09110 PF01192 RNA polymerase Rpb6 NF551_09115 PF00625 Guanylate kinase NF551_09120 PF00625 Guanylate kinase NF551_09125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NF551_09130 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NF551_09130 PF02142 MGS-like domain NF551_09130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NF551_09135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NF551_09135 PF00117 Glutamine amidotransferase class-I NF551_09145 PF01979 Amidohydrolase family NF551_09150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NF551_09150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NF551_09155 PF00156 Phosphoribosyl transferase domain NF551_09165 PF01029 NusB family NF551_09170 PF01132 Elongation factor P (EF-P) OB domain NF551_09170 PF08207 Elongation factor P (EF-P) KOW-like domain NF551_09170 PF09285 Elongation factor P, C-terminal NF551_09175 PF01761 3-dehydroquinate synthase NF551_09180 PF01202 Shikimate kinase NF551_09185 PF01264 Chorismate synthase NF551_09190 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NF551_09190 PF01488 Shikimate / quinate 5-dehydrogenase NF551_09190 PF08501 Shikimate dehydrogenase substrate binding domain NF551_09200 PF03652 Holliday junction resolvase NF551_09205 PF02272 DHHA1 domain NF551_09205 PF01411 tRNA synthetases class II (A) NF551_09205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NF551_09220 PF01479 S4 domain NF551_09220 PF00163 Ribosomal protein S4/S9 N-terminal domain NF551_09225 PF12002 MgsA AAA+ ATPase C terminal NF551_09225 PF00004 ATPase family associated with various cellular activities (AAA) NF551_09225 PF16193 AAA C-terminal domain NF551_09230 PF02567 Phenazine biosynthesis-like protein NF551_09255 PF02938 GAD domain NF551_09255 PF00152 tRNA synthetases class II (D, K and N) NF551_09255 PF01336 OB-fold nucleic acid binding domain NF551_09270 PF00962 Adenosine/AMP deaminase NF551_09275 PF03060 Nitronate monooxygenase NF551_09290 PF02673 Bacitracin resistance protein BacA NF551_09295 PF03781 Sulfatase-modifying factor enzyme 1 NF551_09315 PF00561 alpha/beta hydrolase fold NF551_09320 PF09084 NMT1/THI5 like NF551_09325 PF00528 Binding-protein-dependent transport system inner membrane component NF551_09330 PF00005 ABC transporter NF551_09335 PF00528 Binding-protein-dependent transport system inner membrane component NF551_09345 PF01979 Amidohydrolase family NF551_09350 PF00795 Carbon-nitrogen hydrolase NF551_09360 PF01032 FecCD transport family NF551_09365 PF00005 ABC transporter NF551_09370 PF00881 Nitroreductase family NF551_09370 PF01996 F420-0:Gamma-glutamyl ligase NF551_09375 PF00296 Luciferase-like monooxygenase NF551_09380 PF13393 Histidyl-tRNA synthetase NF551_09380 PF03129 Anticodon binding domain NF551_09390 PF03993 Domain of Unknown Function (DUF349) NF551_09400 PF13291 ACT domain NF551_09400 PF04607 Region found in RelA / SpoT proteins NF551_09400 PF02824 TGS domain NF551_09405 PF07549 SecD/SecF GG Motif NF551_09405 PF02355 Protein export membrane protein NF551_09410 PF02355 Protein export membrane protein NF551_09410 PF07549 SecD/SecF GG Motif NF551_09425 PF01330 RuvA N terminal domain NF551_09425 PF07499 RuvA, C-terminal domain NF551_09430 PF02075 Crossover junction endodeoxyribonuclease RuvC NF551_09435 PF01709 Transcriptional regulator NF551_09440 PF01174 SNO glutamine amidotransferase family NF551_09445 PF08353 Domain of unknown function (DUF1727) NF551_09445 PF08245 Mur ligase middle domain NF551_09450 PF07685 CobB/CobQ-like glutamine amidotransferase domain NF551_09470 PF01432 Peptidase family M3 NF551_09480 PF01680 SOR/SNZ family NF551_09485 PF01066 CDP-alcohol phosphatidyltransferase NF551_09490 PF01230 HIT domain NF551_09495 PF03129 Anticodon binding domain NF551_09495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NF551_09495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NF551_09500 PF02811 PHP domain NF551_09500 PF14579 Helix-hairpin-helix motif NF551_09500 PF07733 Bacterial DNA polymerase III alpha NTPase domain NF551_09500 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NF551_09510 PF07690 Major Facilitator Superfamily NF551_09515 PF07690 Major Facilitator Superfamily NF551_09520 PF10951 Protein of unknown function (DUF2776) NF551_09530 PF02515 CoA-transferase family III NF551_09540 PF03176 MMPL family NF551_09550 PF02586 SOS response associated peptidase (SRAP) NF551_09555 PF00462 Glutaredoxin NF551_09560 PF08240 Alcohol dehydrogenase GroES-like domain NF551_09560 PF00107 Zinc-binding dehydrogenase NF551_09565 PF00753 Metallo-beta-lactamase superfamily NF551_09605 PF00248 Aldo/keto reductase family NF551_09610 PF02586 SOS response associated peptidase (SRAP) NF551_09620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NF551_09635 PF01726 LexA DNA binding domain NF551_09635 PF00717 Peptidase S24-like NF551_09640 PF13438 Domain of unknown function (DUF4113) NF551_09640 PF00817 impB/mucB/samB family NF551_09640 PF11799 impB/mucB/samB family C-terminal domain NF551_09640 PF11798 IMS family HHH motif NF551_09660 PF00999 Sodium/hydrogen exchanger family NF551_09670 PF00248 Aldo/keto reductase family NF551_09675 PF04073 Aminoacyl-tRNA editing domain NF551_09675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NF551_09675 PF03129 Anticodon binding domain NF551_09680 PF00248 Aldo/keto reductase family NF551_09700 PF01593 Flavin containing amine oxidoreductase NF551_09705 PF03462 PCRF domain NF551_09705 PF00472 RF-1 domain NF551_09715 PF00268 Ribonucleotide reductase, small chain NF551_09720 PF00317 Ribonucleotide reductase, all-alpha domain NF551_09720 PF08343 Ribonucleotide reductase N-terminal NF551_09720 PF02867 Ribonucleotide reductase, barrel domain NF551_09725 PF07972 NrdI Flavodoxin like NF551_09730 PF00462 Glutaredoxin NF551_09735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NF551_09735 PF03466 LysR substrate binding domain NF551_09760 PF01734 Patatin-like phospholipase NF551_09765 PF13411 MerR HTH family regulatory protein NF551_09765 PF07739 TipAS antibiotic-recognition domain NF551_09775 PF04030 D-arabinono-1,4-lactone oxidase NF551_09775 PF01565 FAD binding domain NF551_09785 PF00293 NUDIX domain NF551_09790 PF03435 Saccharopine dehydrogenase NADP binding domain NF551_09795 PF00248 Aldo/keto reductase family NF551_09820 PF01467 Cytidylyltransferase-like NF551_09830 PF00171 Aldehyde dehydrogenase family NF551_09835 PF00696 Amino acid kinase family NF551_09835 PF01472 PUA domain NF551_09840 PF09269 Domain of unknown function (DUF1967) NF551_09840 PF01018 GTP1/OBG NF551_09840 PF01926 50S ribosome-binding GTPase NF551_09845 PF01016 Ribosomal L27 protein NF551_09850 PF00829 Ribosomal prokaryotic L21 protein NF551_09855 PF10150 Ribonuclease E/G family NF551_09870 PF00334 Nucleoside diphosphate kinase NF551_09880 PF08245 Mur ligase middle domain NF551_09880 PF02875 Mur ligase family, glutamate ligase domain NF551_09885 PF00133 tRNA synthetases class I (I, L, M and V) NF551_09885 PF08264 Anticodon-binding domain of tRNA NF551_09890 PF00106 short chain dehydrogenase NF551_09900 PF04343 Protein of unknown function, DUF488 NF551_09905 PF08264 Anticodon-binding domain of tRNA NF551_09905 PF00133 tRNA synthetases class I (I, L, M and V) NF551_09910 PF01323 DSBA-like thioredoxin domain NF551_09915 PF07724 AAA domain (Cdc48 subfamily) NF551_09915 PF10431 C-terminal, D2-small domain, of ClpB protein NF551_09915 PF06689 ClpX C4-type zinc finger NF551_09920 PF00574 Clp protease NF551_09925 PF00574 Clp protease NF551_09930 PF05698 Bacterial trigger factor protein (TF) C-terminus NF551_09930 PF05697 Bacterial trigger factor protein (TF) NF551_09930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NF551_09945 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NF551_09945 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NF551_09945 PF06827 Zinc finger found in FPG and IleRS NF551_09950 PF02502 Ribose/Galactose Isomerase NF551_09955 PF00756 Putative esterase NF551_09955 PF08310 LGFP repeat NF551_09960 PF01433 Peptidase family M1 domain NF551_09960 PF11838 ERAP1-like C-terminal domain NF551_09970 PF00924 Mechanosensitive ion channel NF551_09975 PF01152 Bacterial-like globin NF551_09995 PF12848 ABC transporter NF551_09995 PF00005 ABC transporter NF551_10005 PF00436 Single-strand binding protein family NF551_10060 PF00929 Exonuclease NF551_10070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NF551_10070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NF551_10070 PF02770 Acyl-CoA dehydrogenase, middle domain NF551_10075 PF01327 Polypeptide deformylase NF551_10080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NF551_10080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NF551_10095 PF03883 Peroxide stress protein YaaA NF551_10100 PF13456 Reverse transcriptase-like NF551_10100 PF00300 Histidine phosphatase superfamily (branch 1) NF551_10110 PF01784 NIF3 (NGG1p interacting factor 3) NF551_10115 PF01625 Peptide methionine sulfoxide reductase NF551_10120 PF00291 Pyridoxal-phosphate dependent enzyme NF551_10125 PF00132 Bacterial transferase hexapeptide (six repeats) NF551_10130 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NF551_10130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NF551_10150 PF02146 Sir2 family NF551_10160 PF11253 Protein of unknown function (DUF3052) NF551_10165 PF00456 Transketolase, thiamine diphosphate binding domain NF551_10165 PF17831 Pyruvate dehydrogenase E1 component middle domain NF551_10180 PF17853 GGDEF-like domain NF551_10180 PF13556 PucR C-terminal helix-turn-helix domain NF551_10185 PF00698 Acyl transferase domain NF551_10190 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NF551_10190 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NF551_10195 PF00550 Phosphopantetheine attachment site NF551_10200 PF00109 Beta-ketoacyl synthase, N-terminal domain NF551_10200 PF02801 Beta-ketoacyl synthase, C-terminal domain NF551_10210 PF02899 Phage integrase, N-terminal SAM-like domain NF551_10210 PF00589 Phage integrase family NF551_10215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NF551_10215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NF551_10220 PF02481 DNA recombination-mediator protein A NF551_10220 PF17782 DprA winged helix domain NF551_10225 PF13335 Magnesium chelatase, subunit ChlI C-terminal NF551_10225 PF01078 Magnesium chelatase, subunit ChlI NF551_10230 PF02021 Uncharacterised protein family UPF0102 NF551_10245 PF10611 Protein of unknown function (DUF2469) NF551_10250 PF01351 Ribonuclease HII NF551_10255 PF10502 Signal peptidase, peptidase S26 NF551_10260 PF10502 Signal peptidase, peptidase S26 NF551_10265 PF01245 Ribosomal protein L19 NF551_10270 PF01746 tRNA (Guanine-1)-methyltransferase NF551_10275 PF01782 RimM N-terminal domain NF551_10285 PF00886 Ribosomal protein S16 NF551_10290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NF551_10295 PF00583 Acetyltransferase (GNAT) family NF551_10310 PF00448 SRP54-type protein, GTPase domain NF551_10310 PF02881 SRP54-type protein, helical bundle domain NF551_10310 PF02978 Signal peptide binding domain NF551_10315 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NF551_10315 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NF551_10320 PF00543 Nitrogen regulatory protein P-II NF551_10325 PF00909 Ammonium Transporter Family NF551_10335 PF00448 SRP54-type protein, GTPase domain NF551_10335 PF02881 SRP54-type protein, helical bundle domain NF551_10340 PF07690 Major Facilitator Superfamily NF551_10350 PF06470 SMC proteins Flexible Hinge Domain NF551_10350 PF02463 RecF/RecN/SMC N terminal domain NF551_10355 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NF551_10355 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NF551_10360 PF00501 AMP-binding enzyme NF551_10365 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NF551_10370 PF00144 Beta-lactamase NF551_10375 PF06827 Zinc finger found in FPG and IleRS NF551_10375 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NF551_10375 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NF551_10380 PF00035 Double-stranded RNA binding motif NF551_10380 PF14622 Ribonuclease-III-like NF551_10385 PF01783 Ribosomal L32p protein family NF551_10390 PF02620 Large ribosomal RNA subunit accumulation protein YceD NF551_10400 PF01467 Cytidylyltransferase-like NF551_10405 PF00155 Aminotransferase class I and II NF551_10420 PF17191 RecG wedge domain NF551_10420 PF00271 Helicase conserved C-terminal domain NF551_10420 PF00270 DEAD/DEAH box helicase NF551_10425 PF13684 Dihydroxyacetone kinase family NF551_10425 PF02734 DAK2 domain NF551_10435 PF02350 UDP-N-acetylglucosamine 2-epimerase NF551_10450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NF551_10450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NF551_10450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NF551_10460 PF00005 ABC transporter NF551_10465 PF01061 ABC-2 type transporter NF551_10470 PF00534 Glycosyl transferases group 1 NF551_10485 PF03816 Cell envelope-related transcriptional attenuator domain NF551_10495 PF07478 D-ala D-ala ligase C-terminus NF551_10495 PF01820 D-ala D-ala ligase N-terminus NF551_10500 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NF551_10500 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NF551_10510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NF551_10515 PF00694 Aconitase C-terminal domain NF551_10520 PF00330 Aconitase family (aconitate hydratase) NF551_10525 PF09339 IclR helix-turn-helix domain NF551_10525 PF01614 Bacterial transcriptional regulator NF551_10530 PF00027 Cyclic nucleotide-binding domain NF551_10530 PF00520 Ion transport protein NF551_10540 PF00586 AIR synthase related protein, N-terminal domain NF551_10540 PF02769 AIR synthase related protein, C-terminal domain NF551_10560 PF13419 Haloacid dehalogenase-like hydrolase NF551_10565 PF00749 tRNA synthetases class I (E and Q), catalytic domain NF551_10575 PF01557 Fumarylacetoacetate (FAA) hydrolase family NF551_10600 PF00753 Metallo-beta-lactamase superfamily NF551_10600 PF16123 Hydroxyacylglutathione hydrolase C-terminus NF551_10605 PF01063 Amino-transferase class IV NF551_10610 PF00180 Isocitrate/isopropylmalate dehydrogenase NF551_10615 PF07730 Histidine kinase NF551_10620 PF00196 Bacterial regulatory proteins, luxR family NF551_10620 PF00072 Response regulator receiver domain NF551_10630 PF00005 ABC transporter NF551_10630 PF02687 FtsX-like permease family NF551_10630 PF12704 MacB-like periplasmic core domain NF551_10635 PF00005 ABC transporter NF551_10635 PF02687 FtsX-like permease family NF551_10635 PF12704 MacB-like periplasmic core domain NF551_10645 PF09334 tRNA synthetases class I (M) NF551_10655 PF00005 ABC transporter NF551_10655 PF02687 FtsX-like permease family NF551_10655 PF12704 MacB-like periplasmic core domain NF551_10660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NF551_10660 PF01842 ACT domain NF551_10660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NF551_10665 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NF551_10665 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NF551_10670 PF10369 Small subunit of acetolactate synthase NF551_10675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NF551_10675 PF00205 Thiamine pyrophosphate enzyme, central domain NF551_10675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NF551_10680 PF00920 Dehydratase family NF551_10690 PF01842 ACT domain NF551_10690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NF551_10690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NF551_10700 PF00578 AhpC/TSA family NF551_10720 PF02803 Thiolase, C-terminal domain NF551_10720 PF00108 Thiolase, N-terminal domain NF551_10725 PF01494 FAD binding domain NF551_10730 PF13193 AMP-binding enzyme C-terminal domain NF551_10730 PF00501 AMP-binding enzyme NF551_10735 PF01557 Fumarylacetoacetate (FAA) hydrolase family NF551_10740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NF551_10745 PF01613 Flavin reductase like domain NF551_10755 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NF551_10755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NF551_10780 PF16859 Tetracyclin repressor-like, C-terminal domain NF551_10780 PF00440 Bacterial regulatory proteins, tetR family NF551_10790 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NF551_10795 PF00005 ABC transporter NF551_10800 PF02653 Branched-chain amino acid transport system / permease component NF551_10820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NF551_10825 PF00528 Binding-protein-dependent transport system inner membrane component NF551_10830 PF00528 Binding-protein-dependent transport system inner membrane component NF551_10830 PF12911 N-terminal TM domain of oligopeptide transport permease C NF551_10835 PF00005 ABC transporter NF551_10835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NF551_10840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NF551_10845 PF06039 Malate:quinone oxidoreductase (Mqo) NF551_10850 PF00873 AcrB/AcrD/AcrF family NF551_10855 PF00296 Luciferase-like monooxygenase NF551_10860 PF01047 MarR family NF551_10865 PF07690 Major Facilitator Superfamily NF551_10870 PF01546 Peptidase family M20/M25/M40 NF551_10870 PF07687 Peptidase dimerisation domain NF551_10875 PF00266 Aminotransferase class-V NF551_10880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NF551_10880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NF551_10885 PF02445 Quinolinate synthetase A protein NF551_10900 PF00676 Dehydrogenase E1 component NF551_10905 PF02780 Transketolase, C-terminal domain NF551_10905 PF02779 Transketolase, pyrimidine binding domain NF551_10910 PF00364 Biotin-requiring enzyme NF551_10910 PF02817 e3 binding domain NF551_10910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NF551_10915 PF00561 alpha/beta hydrolase fold NF551_10915 PF00364 Biotin-requiring enzyme NF551_10920 PF03793 PASTA domain NF551_10920 PF00069 Protein kinase domain NF551_10930 PF00005 ABC transporter NF551_10935 PF00528 Binding-protein-dependent transport system inner membrane component NF551_10940 PF00528 Binding-protein-dependent transport system inner membrane component NF551_10945 PF09084 NMT1/THI5 like NF551_10955 PF13476 AAA domain NF551_10960 PF12320 Type 5 capsule protein repressor C-terminal domain NF551_10960 PF00149 Calcineurin-like phosphoesterase NF551_10965 PF00230 Major intrinsic protein NF551_10975 PF14579 Helix-hairpin-helix motif NF551_10975 PF11490 DNA polymerase III polC-type N-terminus II NF551_10975 PF07733 Bacterial DNA polymerase III alpha NTPase domain NF551_10975 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NF551_10975 PF00929 Exonuclease NF551_10975 PF02811 PHP domain NF551_10980 PF09335 SNARE associated Golgi protein NF551_10985 PF01725 Ham1 family NF551_10990 PF03725 3' exoribonuclease family, domain 2 NF551_10990 PF01138 3' exoribonuclease family, domain 1 NF551_10995 PF12706 Beta-lactamase superfamily domain NF551_11000 PF01177 Asp/Glu/Hydantoin racemase NF551_11010 PF02617 ATP-dependent Clp protease adaptor protein ClpS NF551_11015 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NF551_11015 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NF551_11020 PF00857 Isochorismatase family NF551_11025 PF04851 Type III restriction enzyme, res subunit NF551_11045 PF13732 Domain of unknown function (DUF4162) NF551_11045 PF00005 ABC transporter NF551_11050 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family NF551_11055 PF00085 Thioredoxin NF551_11075 PF01939 Endonuclease NucS NF551_11080 PF00313 'Cold-shock' DNA-binding domain NF551_11085 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NF551_11095 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NF551_11100 PF02874 ATP synthase alpha/beta family, beta-barrel domain NF551_11100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NF551_11105 PF00231 ATP synthase NF551_11110 PF00306 ATP synthase alpha/beta chain, C terminal domain NF551_11110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NF551_11110 PF02874 ATP synthase alpha/beta family, beta-barrel domain NF551_11115 PF00213 ATP synthase delta (OSCP) subunit NF551_11120 PF00430 ATP synthase B/B' CF(0) NF551_11125 PF00137 ATP synthase subunit C NF551_11130 PF00119 ATP synthase A chain NF551_11150 PF02719 Polysaccharide biosynthesis protein NF551_11165 PF01370 NAD dependent epimerase/dehydratase family NF551_11170 PF01300 Telomere recombination NF551_11175 PF13649 Methyltransferase domain NF551_11175 PF17827 PrmC N-terminal domain NF551_11180 PF03462 PCRF domain NF551_11180 PF00472 RF-1 domain NF551_11185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NF551_11185 PF07498 Rho termination factor, N-terminal domain NF551_11185 PF07497 Rho termination factor, RNA-binding domain NF551_11190 PF00288 GHMP kinases N terminal domain NF551_11195 PF00291 Pyridoxal-phosphate dependent enzyme NF551_11200 PF01842 ACT domain NF551_11200 PF03447 Homoserine dehydrogenase, NAD binding domain NF551_11200 PF00742 Homoserine dehydrogenase NF551_11205 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NF551_11205 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NF551_11210 PF03485 Arginyl tRNA synthetase N terminal domain NF551_11210 PF05746 DALR anticodon binding domain NF551_11210 PF00750 tRNA synthetases class I (R) NF551_11235 PF02687 FtsX-like permease family NF551_11235 PF12704 MacB-like periplasmic core domain NF551_11240 PF12704 MacB-like periplasmic core domain NF551_11240 PF02687 FtsX-like permease family NF551_11240 PF00005 ABC transporter NF551_11250 PF01965 DJ-1/PfpI family NF551_11250 PF12833 Helix-turn-helix domain NF551_11270 PF00270 DEAD/DEAH box helicase NF551_11270 PF11898 Domain of unknown function (DUF3418) NF551_11270 PF04408 Helicase associated domain (HA2) NF551_11270 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NF551_11270 PF00271 Helicase conserved C-terminal domain NF551_11275 PF01230 HIT domain NF551_11280 PF00581 Rhodanese-like domain NF551_11290 PF01475 Ferric uptake regulator family NF551_11295 PF00950 ABC 3 transport family NF551_11300 PF00005 ABC transporter NF551_11310 PF01595 Cyclin M transmembrane N-terminal domain NF551_11310 PF00571 CBS domain NF551_11315 PF03471 Transporter associated domain NF551_11315 PF01595 Cyclin M transmembrane N-terminal domain NF551_11315 PF00571 CBS domain NF551_11320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NF551_11320 PF00676 Dehydrogenase E1 component NF551_11320 PF16870 2-oxoglutarate dehydrogenase C-terminal NF551_11320 PF02779 Transketolase, pyrimidine binding domain NF551_11320 PF16078 2-oxoglutarate dehydrogenase N-terminus NF551_11330 PF08240 Alcohol dehydrogenase GroES-like domain NF551_11330 PF00107 Zinc-binding dehydrogenase NF551_11340 PF04542 Sigma-70 region 2 NF551_11340 PF08281 Sigma-70, region 4 NF551_11350 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NF551_11355 PF03193 RsgA GTPase NF551_11360 PF00459 Inositol monophosphatase family NF551_11370 PF04107 Glutamate-cysteine ligase family 2(GCS2) NF551_11375 PF04107 Glutamate-cysteine ligase family 2(GCS2) NF551_11380 PF00128 Alpha amylase, catalytic domain NF551_11445 PF02384 N-6 DNA Methylase NF551_11455 PF11867 Domain of unknown function (DUF3387) NF551_11455 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NF551_11455 PF18766 SWI2/SNF2 ATPase NF551_11475 PF01668 SmpB protein NF551_11480 PF01551 Peptidase family M23 NF551_11480 PF04225 Opacity-associated protein A LysM-like domain NF551_11485 PF02687 FtsX-like permease family NF551_11485 PF18075 FtsX extracellular domain NF551_11490 PF00005 ABC transporter NF551_11510 PF00501 AMP-binding enzyme NF551_11510 PF13193 AMP-binding enzyme C-terminal domain NF551_11520 PF02653 Branched-chain amino acid transport system / permease component NF551_11525 PF00005 ABC transporter NF551_11530 PF12399 Branched-chain amino acid ATP-binding cassette transporter NF551_11530 PF00005 ABC transporter NF551_11540 PF01757 Acyltransferase family NF551_11545 PF00472 RF-1 domain NF551_11545 PF03462 PCRF domain NF551_11585 PF00437 Type II/IV secretion system protein NF551_11590 PF01183 Glycosyl hydrolases family 25 NF551_11595 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NF551_11600 PF16363 GDP-mannose 4,6 dehydratase NF551_11610 PF00535 Glycosyl transferase family 2 NF551_11615 PF00535 Glycosyl transferase family 2 NF551_11630 PF01370 NAD dependent epimerase/dehydratase family NF551_11640 PF01757 Acyltransferase family NF551_11645 PF00483 Nucleotidyl transferase NF551_11655 PF00005 ABC transporter NF551_11660 PF01061 ABC-2 type transporter NF551_11665 PF17994 Galactofuranosyltransferase 2 N-terminal NF551_11670 PF03275 UDP-galactopyranose mutase NF551_11675 PF01757 Acyltransferase family NF551_11685 PF02467 Transcription factor WhiB NF551_11690 PF12282 Signal transduction histidine kinase NF551_11690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_11690 PF07568 Histidine kinase NF551_11695 PF05088 Bacterial NAD-glutamate dehydrogenase NF551_11730 PF07517 SecA DEAD-like domain NF551_11730 PF01043 SecA preprotein cross-linking domain NF551_11730 PF07516 SecA Wing and Scaffold domain NF551_11735 PF06224 Winged helix DNA-binding domain NF551_11740 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NF551_11740 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NF551_11745 PF00156 Phosphoribosyl transferase domain NF551_11750 PF10647 Lipoprotein LpqB beta-propeller domain NF551_11750 PF10646 Sporulation and spore germination NF551_11755 PF00672 HAMP domain NF551_11755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_11755 PF00512 His Kinase A (phospho-acceptor) domain NF551_11760 PF00072 Response regulator receiver domain NF551_11760 PF00486 Transcriptional regulatory protein, C terminal NF551_11775 PF14258 Domain of unknown function (DUF4350) NF551_11780 PF07726 ATPase family associated with various cellular activities (AAA) NF551_11780 PF17863 AAA lid domain NF551_11810 PF00266 Aminotransferase class-V NF551_11815 PF00226 DnaJ domain NF551_11815 PF01556 DnaJ C terminal domain NF551_11815 PF00684 DnaJ central domain NF551_11820 PF00588 SpoU rRNA Methylase family NF551_11825 PF13847 Methyltransferase domain NF551_11830 PF02585 GlcNAc-PI de-N-acetylase NF551_11835 PF00766 Electron transfer flavoprotein FAD-binding domain NF551_11835 PF01012 Electron transfer flavoprotein domain NF551_11840 PF01012 Electron transfer flavoprotein domain NF551_11845 PF13180 PDZ domain NF551_11850 PF04536 TPM domain NF551_11855 PF04012 PspA/IM30 family NF551_11870 PF03699 Uncharacterised protein family (UPF0182) NF551_11875 PF05362 Lon protease (S16) C-terminal proteolytic domain NF551_11875 PF13180 PDZ domain NF551_11895 PF00570 HRDC domain NF551_11895 PF00580 UvrD/REP helicase N-terminal domain NF551_11895 PF13361 UvrD-like helicase C-terminal domain NF551_11900 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NF551_11900 PF09297 NADH pyrophosphatase zinc ribbon domain NF551_11900 PF00293 NUDIX domain NF551_11905 PF01636 Phosphotransferase enzyme family NF551_11915 PF00005 ABC transporter NF551_11925 PF00580 UvrD/REP helicase N-terminal domain NF551_11925 PF13361 UvrD-like helicase C-terminal domain NF551_11945 PF00005 ABC transporter NF551_11945 PF09383 NIL domain NF551_11955 PF03180 NLPA lipoprotein NF551_11960 PF13732 Domain of unknown function (DUF4162) NF551_11960 PF00005 ABC transporter NF551_11970 PF00202 Aminotransferase class-III NF551_11975 PF00490 Delta-aminolevulinic acid dehydratase NF551_11985 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NF551_11985 PF03900 Porphobilinogen deaminase, C-terminal domain NF551_11990 PF00762 Ferrochelatase NF551_11995 PF06778 Chlorite dismutase NF551_12000 PF01593 Flavin containing amine oxidoreductase NF551_12005 PF01208 Uroporphyrinogen decarboxylase (URO-D) NF551_12010 PF01488 Shikimate / quinate 5-dehydrogenase NF551_12010 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NF551_12010 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NF551_12015 PF00899 ThiF family NF551_12015 PF00581 Rhodanese-like domain NF551_12045 PF00271 Helicase conserved C-terminal domain NF551_12045 PF00270 DEAD/DEAH box helicase NF551_12050 PF01555 DNA methylase NF551_12055 PF02811 PHP domain NF551_12060 PF05195 Aminopeptidase P, N-terminal domain NF551_12060 PF00557 Metallopeptidase family M24 NF551_12070 PF00571 CBS domain NF551_12070 PF01769 Divalent cation transporter NF551_12070 PF03448 MgtE intracellular N domain NF551_12080 PF01883 Iron-sulfur cluster assembly protein NF551_12080 PF10609 NUBPL iron-transfer P-loop NTPase NF551_12085 PF02416 mttA/Hcf106 family NF551_12095 PF04542 Sigma-70 region 2 NF551_12095 PF08281 Sigma-70, region 4 NF551_12100 PF01596 O-methyltransferase NF551_12105 PF00883 Cytosol aminopeptidase family, catalytic domain NF551_12105 PF02789 Cytosol aminopeptidase family, N-terminal domain NF551_12115 PF13673 Acetyltransferase (GNAT) domain NF551_12115 PF13302 Acetyltransferase (GNAT) domain NF551_12115 PF03352 Methyladenine glycosylase NF551_12115 PF00117 Glutamine amidotransferase class-I NF551_12115 PF00958 GMP synthase C terminal domain NF551_12125 PF03641 Possible lysine decarboxylase NF551_12130 PF00005 ABC transporter NF551_12135 PF00497 Bacterial extracellular solute-binding proteins, family 3 NF551_12140 PF00528 Binding-protein-dependent transport system inner membrane component NF551_12145 PF00528 Binding-protein-dependent transport system inner membrane component NF551_12150 PF07687 Peptidase dimerisation domain NF551_12150 PF01546 Peptidase family M20/M25/M40 NF551_12155 PF14602 Hexapeptide repeat of succinyl-transferase NF551_12155 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle NF551_12165 PF16363 GDP-mannose 4,6 dehydratase NF551_12170 PF00285 Citrate synthase, C-terminal domain NF551_12175 PF00155 Aminotransferase class I and II NF551_12180 PF00037 4Fe-4S binding domain NF551_12200 PF00009 Elongation factor Tu GTP binding domain NF551_12200 PF14492 Elongation Factor G, domain II NF551_12200 PF03144 Elongation factor Tu domain 2 NF551_12200 PF00679 Elongation factor G C-terminus NF551_12205 PF00005 ABC transporter NF551_12205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NF551_12210 PF00528 Binding-protein-dependent transport system inner membrane component NF551_12210 PF12911 N-terminal TM domain of oligopeptide transport permease C NF551_12215 PF00528 Binding-protein-dependent transport system inner membrane component NF551_12220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NF551_12225 PF00005 ABC transporter NF551_12225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NF551_12235 PF00528 Binding-protein-dependent transport system inner membrane component NF551_12235 PF12911 N-terminal TM domain of oligopeptide transport permease C NF551_12240 PF00528 Binding-protein-dependent transport system inner membrane component NF551_12245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NF551_12280 PF03682 Uncharacterised protein family (UPF0158) NF551_12290 PF00144 Beta-lactamase NF551_12300 PF06071 Protein of unknown function (DUF933) NF551_12300 PF01926 50S ribosome-binding GTPase NF551_12305 PF02401 LytB protein NF551_12315 PF02601 Exonuclease VII, large subunit NF551_12315 PF13742 OB-fold nucleic acid binding domain NF551_12320 PF02609 Exonuclease VII small subunit NF551_12325 PF00155 Aminotransferase class I and II NF551_12335 PF00528 Binding-protein-dependent transport system inner membrane component NF551_12340 PF00528 Binding-protein-dependent transport system inner membrane component NF551_12345 PF00005 ABC transporter NF551_12345 PF00571 CBS domain NF551_12350 PF00293 NUDIX domain NF551_12355 PF01869 BadF/BadG/BcrA/BcrD ATPase family NF551_12375 PF00483 Nucleotidyl transferase NF551_12380 PF01812 5-formyltetrahydrofolate cyclo-ligase family NF551_12405 PF02540 NAD synthase NF551_12405 PF00117 Glutamine amidotransferase class-I NF551_12405 PF00958 GMP synthase C terminal domain NF551_12410 PF12823 Domain of unknown function (DUF3817) NF551_12425 PF01266 FAD dependent oxidoreductase NF551_12425 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NF551_12430 PF00478 IMP dehydrogenase / GMP reductase domain NF551_12435 PF00478 IMP dehydrogenase / GMP reductase domain NF551_12435 PF00571 CBS domain NF551_12440 PF01757 Acyltransferase family NF551_12445 PF00118 TCP-1/cpn60 chaperonin family NF551_12450 PF00166 Chaperonin 10 Kd subunit NF551_12455 PF01497 Periplasmic binding protein NF551_12460 PF01032 FecCD transport family NF551_12465 PF01032 FecCD transport family NF551_12470 PF00005 ABC transporter NF551_12490 PF00155 Aminotransferase class I and II NF551_12500 PF18096 THUMP domain-like NF551_12505 PF08501 Shikimate dehydrogenase substrate binding domain NF551_12510 PF04107 Glutamate-cysteine ligase family 2(GCS2) NF551_12520 PF00814 Glycoprotease family NF551_12530 PF00814 Glycoprotease family NF551_12530 PF00583 Acetyltransferase (GNAT) family NF551_12545 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NF551_12550 PF00842 Alanine racemase, C-terminal domain NF551_12550 PF01168 Alanine racemase, N-terminal domain NF551_12560 PF00248 Aldo/keto reductase family NF551_12565 PF00128 Alpha amylase, catalytic domain NF551_12565 PF11941 Domain of unknown function (DUF3459) NF551_12570 PF00128 Alpha amylase, catalytic domain NF551_12575 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NF551_12575 PF00128 Alpha amylase, catalytic domain NF551_12580 PF01256 Carbohydrate kinase NF551_12580 PF03853 YjeF-related protein N-terminus NF551_12585 PF01648 4'-phosphopantetheinyl transferase superfamily NF551_12590 PF01380 SIS domain NF551_12595 PF00485 Phosphoribulokinase / Uridine kinase family NF551_12600 PF01741 Large-conductance mechanosensitive channel, MscL NF551_12605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NF551_12605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NF551_12605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NF551_12605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NF551_12610 PF00380 Ribosomal protein S9/S16 NF551_12615 PF00572 Ribosomal protein L13 NF551_12620 PF01416 tRNA pseudouridine synthase NF551_12625 PF01196 Ribosomal protein L17 NF551_12630 PF01000 RNA polymerase Rpb3/RpoA insert domain NF551_12630 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NF551_12630 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NF551_12635 PF00411 Ribosomal protein S11 NF551_12640 PF00416 Ribosomal protein S13/S18 NF551_12645 PF00444 Ribosomal protein L36 NF551_12650 PF01176 Translation initiation factor 1A / IF-1 NF551_12665 PF00557 Metallopeptidase family M24 NF551_12675 PF00344 SecY translocase NF551_12680 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NF551_12685 PF00327 Ribosomal protein L30p/L7e NF551_12690 PF00333 Ribosomal protein S5, N-terminal domain NF551_12690 PF03719 Ribosomal protein S5, C-terminal domain NF551_12695 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NF551_12700 PF00347 Ribosomal protein L6 NF551_12705 PF00410 Ribosomal protein S8 NF551_12710 PF00281 Ribosomal protein L5 NF551_12710 PF00673 ribosomal L5P family C-terminus NF551_12715 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NF551_12720 PF00238 Ribosomal protein L14p/L23e NF551_12725 PF00366 Ribosomal protein S17 NF551_12735 PF00252 Ribosomal protein L16p/L10e NF551_12740 PF07650 KH domain NF551_12740 PF00189 Ribosomal protein S3, C-terminal domain NF551_12745 PF00237 Ribosomal protein L22p/L17e NF551_12750 PF00203 Ribosomal protein S19 NF551_12755 PF00181 Ribosomal Proteins L2, RNA binding domain NF551_12755 PF03947 Ribosomal Proteins L2, C-terminal domain NF551_12760 PF00276 Ribosomal protein L23 NF551_12765 PF00573 Ribosomal protein L4/L1 family NF551_12770 PF00297 Ribosomal protein L3 NF551_12775 PF00338 Ribosomal protein S10p/S20e NF551_12790 PF00501 AMP-binding enzyme NF551_12790 PF13193 AMP-binding enzyme C-terminal domain NF551_12795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NF551_12795 PF02770 Acyl-CoA dehydrogenase, middle domain NF551_12795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NF551_12800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NF551_12800 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_12805 PF00009 Elongation factor Tu GTP binding domain NF551_12805 PF03144 Elongation factor Tu domain 2 NF551_12805 PF03143 Elongation factor Tu C-terminal domain NF551_12810 PF00679 Elongation factor G C-terminus NF551_12810 PF14492 Elongation Factor G, domain II NF551_12810 PF03764 Elongation factor G, domain IV NF551_12810 PF00009 Elongation factor Tu GTP binding domain NF551_12810 PF03144 Elongation factor Tu domain 2 NF551_12815 PF00177 Ribosomal protein S7p/S5e NF551_12820 PF00164 Ribosomal protein S12/S23 NF551_12825 PF01614 Bacterial transcriptional regulator NF551_12825 PF09339 IclR helix-turn-helix domain NF551_12830 PF01144 Coenzyme A transferase NF551_12835 PF01144 Coenzyme A transferase NF551_12840 PF00108 Thiolase, N-terminal domain NF551_12840 PF02803 Thiolase, C-terminal domain NF551_12845 PF02627 Carboxymuconolactone decarboxylase family NF551_12850 PF12146 Serine aminopeptidase, S33 NF551_12855 PF10397 Adenylosuccinate lyase C-terminus NF551_12855 PF00206 Lyase NF551_12860 PF00775 Dioxygenase NF551_12865 PF00775 Dioxygenase NF551_12865 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NF551_12870 PF01494 FAD binding domain NF551_12880 PF04998 RNA polymerase Rpb1, domain 5 NF551_12880 PF05000 RNA polymerase Rpb1, domain 4 NF551_12880 PF04983 RNA polymerase Rpb1, domain 3 NF551_12880 PF04997 RNA polymerase Rpb1, domain 1 NF551_12880 PF00623 RNA polymerase Rpb1, domain 2 NF551_12885 PF04561 RNA polymerase Rpb2, domain 2 NF551_12885 PF04563 RNA polymerase beta subunit NF551_12885 PF10385 RNA polymerase beta subunit external 1 domain NF551_12885 PF04560 RNA polymerase Rpb2, domain 7 NF551_12885 PF04565 RNA polymerase Rpb2, domain 3 NF551_12885 PF00562 RNA polymerase Rpb2, domain 6 NF551_12890 PF02803 Thiolase, C-terminal domain NF551_12890 PF00108 Thiolase, N-terminal domain NF551_12895 PF04073 Aminoacyl-tRNA editing domain NF551_12895 PF03129 Anticodon binding domain NF551_12895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NF551_12900 PF00542 Ribosomal protein L7/L12 C-terminal domain NF551_12900 PF16320 Ribosomal protein L7/L12 dimerisation domain NF551_12905 PF00466 Ribosomal protein L10 NF551_12915 PF00687 Ribosomal protein L1p/L10e family NF551_12920 PF03946 Ribosomal protein L11, N-terminal domain NF551_12920 PF00298 Ribosomal protein L11, RNA binding domain NF551_12925 PF02357 Transcription termination factor nusG NF551_12930 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NF551_12940 PF00155 Aminotransferase class I and II NF551_12945 PF00196 Bacterial regulatory proteins, luxR family NF551_12945 PF00072 Response regulator receiver domain NF551_12970 PF00365 Phosphofructokinase NF551_12990 PF08768 Domain of unknown function (DUF1794) NF551_13000 PF00486 Transcriptional regulatory protein, C terminal NF551_13005 PF00583 Acetyltransferase (GNAT) family NF551_13010 PF02503 Polyphosphate kinase middle domain NF551_13010 PF13089 Polyphosphate kinase N-terminal domain NF551_13010 PF13090 Polyphosphate kinase C-terminal domain 2 NF551_13010 PF17941 Polyphosphate kinase C-terminal domain 1 NF551_13015 PF00293 NUDIX domain NF551_13015 PF00300 Histidine phosphatase superfamily (branch 1) NF551_13020 PF00210 Ferritin-like domain NF551_13030 PF00392 Bacterial regulatory proteins, gntR family NF551_13035 PF00303 Thymidylate synthase NF551_13040 PF00186 Dihydrofolate reductase NF551_13045 PF01118 Semialdehyde dehydrogenase, NAD binding domain NF551_13045 PF02774 Semialdehyde dehydrogenase, dimerisation domain NF551_13050 PF01565 FAD binding domain NF551_13050 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NF551_13060 PF13452 N-terminal half of MaoC dehydratase NF551_13075 PF01965 DJ-1/PfpI family NF551_13095 PF00069 Protein kinase domain NF551_13105 PF03880 DbpA RNA binding domain NF551_13105 PF00270 DEAD/DEAH box helicase NF551_13105 PF00271 Helicase conserved C-terminal domain NF551_13115 PF09594 Glycosyltransferase family 87 NF551_13125 PF01053 Cys/Met metabolism PLP-dependent enzyme NF551_13130 PF00571 CBS domain NF551_13130 PF00291 Pyridoxal-phosphate dependent enzyme NF551_13145 PF00909 Ammonium Transporter Family NF551_13150 PF08240 Alcohol dehydrogenase GroES-like domain NF551_13150 PF00107 Zinc-binding dehydrogenase NF551_13155 PF00085 Thioredoxin NF551_13175 PF04461 Protein of unknown function (DUF520) NF551_13185 PF01435 Peptidase family M48 NF551_13190 PF05977 Transmembrane secretion effector NF551_13195 PF16123 Hydroxyacylglutathione hydrolase C-terminus NF551_13195 PF00753 Metallo-beta-lactamase superfamily NF551_13205 PF12697 Alpha/beta hydrolase family NF551_13210 PF01475 Ferric uptake regulator family NF551_13215 PF06628 Catalase-related immune-responsive NF551_13215 PF00199 Catalase NF551_13220 PF01040 UbiA prenyltransferase family NF551_13225 PF01040 UbiA prenyltransferase family NF551_13235 PF01593 Flavin containing amine oxidoreductase NF551_13245 PF00348 Polyprenyl synthetase NF551_13250 PF00293 NUDIX domain NF551_13255 PF00535 Glycosyl transferase family 2 NF551_13265 PF00528 Binding-protein-dependent transport system inner membrane component NF551_13275 PF00005 ABC transporter NF551_13285 PF03741 Integral membrane protein TerC family NF551_13290 PF12804 MobA-like NTP transferase domain NF551_13310 PF08240 Alcohol dehydrogenase GroES-like domain NF551_13310 PF00107 Zinc-binding dehydrogenase NF551_13315 PF00171 Aldehyde dehydrogenase family NF551_13320 PF07690 Major Facilitator Superfamily NF551_13330 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_13335 PF00892 EamA-like transporter family NF551_13350 PF00582 Universal stress protein family NF551_13355 PF01593 Flavin containing amine oxidoreductase NF551_13365 PF00202 Aminotransferase class-III NF551_13370 PF13556 PucR C-terminal helix-turn-helix domain NF551_13370 PF07905 Purine catabolism regulatory protein-like family NF551_13385 PF00348 Polyprenyl synthetase NF551_13390 PF01494 FAD binding domain NF551_13395 PF01209 ubiE/COQ5 methyltransferase family NF551_13400 PF00425 chorismate binding enzyme NF551_13405 PF00497 Bacterial extracellular solute-binding proteins, family 3 NF551_13410 PF00497 Bacterial extracellular solute-binding proteins, family 3 NF551_13415 PF00528 Binding-protein-dependent transport system inner membrane component NF551_13420 PF00005 ABC transporter NF551_13425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NF551_13435 PF18374 Enolase N-terminal domain-like NF551_13435 PF13378 Enolase C-terminal domain-like NF551_13455 PF02817 e3 binding domain NF551_13455 PF00364 Biotin-requiring enzyme NF551_13455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NF551_13460 PF02779 Transketolase, pyrimidine binding domain NF551_13460 PF02780 Transketolase, C-terminal domain NF551_13465 PF00676 Dehydrogenase E1 component NF551_13470 PF01037 Lrp/AsnC ligand binding domain NF551_13480 PF04261 Dyp-type peroxidase family NF551_13480 PF10518 TAT (twin-arginine translocation) pathway signal sequence NF551_13490 PF04234 CopC domain NF551_13500 PF00378 Enoyl-CoA hydratase/isomerase NF551_13505 PF00175 Oxidoreductase NAD-binding domain NF551_13505 PF00970 Oxidoreductase FAD-binding domain NF551_13505 PF00111 2Fe-2S iron-sulfur cluster binding domain NF551_13510 PF01883 Iron-sulfur cluster assembly protein NF551_13515 PF05138 Phenylacetic acid catabolic protein NF551_13520 PF06243 Phenylacetic acid degradation B NF551_13525 PF05138 Phenylacetic acid catabolic protein NF551_13540 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NF551_13540 PF00326 Prolyl oligopeptidase family NF551_13545 PF09335 SNARE associated Golgi protein NF551_13555 PF00501 AMP-binding enzyme NF551_13555 PF14535 AMP-binding enzyme C-terminal domain NF551_13565 PF00171 Aldehyde dehydrogenase family NF551_13565 PF01575 MaoC like domain NF551_13570 PF13472 GDSL-like Lipase/Acylhydrolase family NF551_13585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NF551_13585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NF551_13590 PF00378 Enoyl-CoA hydratase/isomerase NF551_13595 PF00108 Thiolase, N-terminal domain NF551_13595 PF02803 Thiolase, C-terminal domain NF551_13635 PF08240 Alcohol dehydrogenase GroES-like domain NF551_13635 PF00550 Phosphopantetheine attachment site NF551_13635 PF08659 KR domain NF551_13635 PF02801 Beta-ketoacyl synthase, C-terminal domain NF551_13635 PF00109 Beta-ketoacyl synthase, N-terminal domain NF551_13635 PF16197 Ketoacyl-synthetase C-terminal extension NF551_13635 PF14765 Polyketide synthase dehydratase NF551_13635 PF00107 Zinc-binding dehydrogenase NF551_13635 PF00698 Acyl transferase domain NF551_13640 PF01256 Carbohydrate kinase NF551_13650 PF07690 Major Facilitator Superfamily NF551_13655 PF00384 Molybdopterin oxidoreductase NF551_13655 PF02613 Nitrate reductase delta subunit NF551_13655 PF02665 Nitrate reductase gamma subunit NF551_13660 PF00384 Molybdopterin oxidoreductase NF551_13660 PF02613 Nitrate reductase delta subunit NF551_13660 PF02665 Nitrate reductase gamma subunit NF551_13665 PF13247 4Fe-4S dicluster domain NF551_13665 PF14711 Respiratory nitrate reductase beta C-terminal NF551_13670 PF00384 Molybdopterin oxidoreductase NF551_13670 PF01568 Molydopterin dinucleotide binding domain NF551_13675 PF00378 Enoyl-CoA hydratase/isomerase NF551_13680 PF13193 AMP-binding enzyme C-terminal domain NF551_13680 PF00501 AMP-binding enzyme NF551_13685 PF01040 UbiA prenyltransferase family NF551_13710 PF01578 Cytochrome C assembly protein NF551_13720 PF02683 Cytochrome C biogenesis protein transmembrane region NF551_13725 PF00578 AhpC/TSA family NF551_13730 PF00300 Histidine phosphatase superfamily (branch 1) NF551_13735 PF04264 YceI-like domain NF551_13750 PF02629 CoA binding domain NF551_13750 PF06971 Putative DNA-binding protein N-terminus NF551_13770 PF12728 Helix-turn-helix domain NF551_13775 PF00793 DAHP synthetase I family NF551_13780 PF01070 FMN-dependent dehydrogenase NF551_13785 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NF551_13785 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NF551_13790 PF01022 Bacterial regulatory protein, arsR family NF551_13795 PF00850 Histone deacetylase domain NF551_13800 PF02386 Cation transport protein NF551_13805 PF02254 TrkA-N domain NF551_13805 PF02080 TrkA-C domain NF551_13810 PF03807 NADP oxidoreductase coenzyme F420-dependent NF551_13810 PF14748 Pyrroline-5-carboxylate reductase dimerisation NF551_13815 PF01261 Xylose isomerase-like TIM barrel NF551_13820 PF02541 Ppx/GppA phosphatase family NF551_13825 PF13368 Topoisomerase C-terminal repeat NF551_13825 PF01751 Toprim domain NF551_13825 PF01131 DNA topoisomerase NF551_13830 PF05175 Methyltransferase small domain NF551_13835 PF07690 Major Facilitator Superfamily NF551_13845 PF00890 FAD binding domain NF551_13850 PF00581 Rhodanese-like domain NF551_13850 PF12368 Rhodanase C-terminal NF551_13850 PF17773 UPF0176 acylphosphatase like domain NF551_13860 PF00271 Helicase conserved C-terminal domain NF551_13860 PF00270 DEAD/DEAH box helicase NF551_13860 PF09369 Domain of unknown function (DUF1998) NF551_13890 PF00437 Type II/IV secretion system protein NF551_13910 PF07730 Histidine kinase NF551_13915 PF00196 Bacterial regulatory proteins, luxR family NF551_13915 PF00072 Response regulator receiver domain NF551_13920 PF00293 NUDIX domain NF551_13925 PF10576 Iron-sulfur binding domain of endonuclease III NF551_13925 PF00633 Helix-hairpin-helix motif NF551_13925 PF00730 HhH-GPD superfamily base excision DNA repair protein NF551_13935 PF13193 AMP-binding enzyme C-terminal domain NF551_13935 PF00501 AMP-binding enzyme NF551_13935 PF16177 Acetyl-coenzyme A synthetase N-terminus NF551_13940 PF02566 OsmC-like protein NF551_13950 PF00083 Sugar (and other) transporter NF551_13950 PF07690 Major Facilitator Superfamily NF551_13955 PF01220 Dehydroquinase class II NF551_13960 PF02674 Colicin V production protein NF551_13965 PF00027 Cyclic nucleotide-binding domain NF551_13965 PF13545 Crp-like helix-turn-helix domain NF551_13985 PF00912 Transglycosylase NF551_13985 PF00905 Penicillin binding protein transpeptidase domain NF551_13990 PF00149 Calcineurin-like phosphoesterase NF551_13995 PF00664 ABC transporter transmembrane region NF551_13995 PF00005 ABC transporter NF551_14000 PF00664 ABC transporter transmembrane region NF551_14000 PF00005 ABC transporter NF551_14015 PF01259 SAICAR synthetase NF551_14020 PF02843 Phosphoribosylglycinamide synthetase, C domain NF551_14020 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NF551_14020 PF02844 Phosphoribosylglycinamide synthetase, N domain NF551_14040 PF00156 Phosphoribosyl transferase domain NF551_14045 PF00586 AIR synthase related protein, N-terminal domain NF551_14045 PF02769 AIR synthase related protein, C-terminal domain NF551_14060 PF07724 AAA domain (Cdc48 subfamily) NF551_14060 PF17871 AAA lid domain NF551_14060 PF00004 ATPase family associated with various cellular activities (AAA) NF551_14060 PF02861 Clp amino terminal domain, pathogenicity island component NF551_14060 PF10431 C-terminal, D2-small domain, of ClpB protein NF551_14070 PF00905 Penicillin binding protein transpeptidase domain NF551_14080 PF03733 Inner membrane component domain NF551_14100 PF00270 DEAD/DEAH box helicase NF551_14100 PF00271 Helicase conserved C-terminal domain NF551_14105 PF02390 Putative methyltransferase NF551_14125 PF00005 ABC transporter NF551_14140 PF00684 DnaJ central domain NF551_14140 PF00226 DnaJ domain NF551_14140 PF01556 DnaJ C terminal domain NF551_14145 PF01025 GrpE NF551_14150 PF00012 Hsp70 protein NF551_14155 PF01209 ubiE/COQ5 methyltransferase family NF551_14160 PF01451 Low molecular weight phosphotyrosine protein phosphatase NF551_14165 PF04715 Anthranilate synthase component I, N terminal region NF551_14165 PF00117 Glutamine amidotransferase class-I NF551_14165 PF00425 chorismate binding enzyme NF551_14170 PF13396 Phospholipase_D-nuclease N-terminal NF551_14170 PF13091 PLD-like domain NF551_14185 PF00005 ABC transporter NF551_14205 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NF551_14215 PF00361 Proton-conducting membrane transporter NF551_14220 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NF551_14225 PF00361 Proton-conducting membrane transporter NF551_14225 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NF551_14225 PF13244 Domain of unknown function (DUF4040) NF551_14225 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NF551_14245 PF00890 FAD binding domain NF551_14250 PF08240 Alcohol dehydrogenase GroES-like domain NF551_14250 PF00107 Zinc-binding dehydrogenase NF551_14260 PF00890 FAD binding domain NF551_14270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NF551_14270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NF551_14275 PF03435 Saccharopine dehydrogenase NADP binding domain NF551_14275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NF551_14275 PF08501 Shikimate dehydrogenase substrate binding domain NF551_14280 PF07690 Major Facilitator Superfamily NF551_14280 PF00083 Sugar (and other) transporter NF551_14285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NF551_14285 PF03466 LysR substrate binding domain NF551_14290 PF00890 FAD binding domain NF551_14295 PF00692 dUTPase NF551_14300 PF03301 Tryptophan 2,3-dioxygenase NF551_14310 PF01447 Thermolysin metallopeptidase, catalytic domain NF551_14310 PF16485 Protealysin propeptide NF551_14310 PF02868 Thermolysin metallopeptidase, alpha-helical domain NF551_14325 PF02261 Aspartate decarboxylase NF551_14335 PF00528 Binding-protein-dependent transport system inner membrane component NF551_14340 PF00528 Binding-protein-dependent transport system inner membrane component NF551_14345 PF00005 ABC transporter NF551_14345 PF17912 MalK OB fold domain NF551_14355 PF17991 Thioredoxin like C-terminal domain NF551_14355 PF02683 Cytochrome C biogenesis protein transmembrane region NF551_14355 PF00578 AhpC/TSA family NF551_14360 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) NF551_14360 PF05425 Copper resistance protein D NF551_14365 PF00216 Bacterial DNA-binding protein NF551_14370 PF00253 Ribosomal protein S14p/S29e NF551_14375 PF00471 Ribosomal protein L33 NF551_14380 PF00830 Ribosomal L28 family NF551_14385 PF00483 Nucleotidyl transferase NF551_14395 PF00083 Sugar (and other) transporter NF551_14405 PF00781 Diacylglycerol kinase catalytic domain NF551_14410 PF01551 Peptidase family M23 NF551_14410 PF01476 LysM domain NF551_14410 PF08525 Opacity-associated protein A N-terminal motif NF551_14415 PF08021 Siderophore-interacting FAD-binding domain NF551_14415 PF04954 Siderophore-interacting protein NF551_14420 PF00005 ABC transporter NF551_14425 PF01032 FecCD transport family NF551_14430 PF01032 FecCD transport family NF551_14435 PF13409 Glutathione S-transferase, N-terminal domain NF551_14440 PF01370 NAD dependent epimerase/dehydratase family NF551_14445 PF03631 Virulence factor BrkB NF551_14465 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_14465 PF18113 Rubredoxin binding C-terminal domain NF551_14470 PF00355 Rieske [2Fe-2S] domain NF551_14485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NF551_14485 PF02770 Acyl-CoA dehydrogenase, middle domain NF551_14485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NF551_14500 PF03069 Acetamidase/Formamidase family NF551_14515 PF00107 Zinc-binding dehydrogenase NF551_14515 PF08240 Alcohol dehydrogenase GroES-like domain NF551_14550 PF13520 Amino acid permease NF551_14560 PF00083 Sugar (and other) transporter NF551_14565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NF551_14565 PF03466 LysR substrate binding domain NF551_14570 PF07687 Peptidase dimerisation domain NF551_14570 PF01546 Peptidase family M20/M25/M40 NF551_14575 PF07730 Histidine kinase NF551_14580 PF00196 Bacterial regulatory proteins, luxR family NF551_14580 PF00072 Response regulator receiver domain NF551_14585 PF13732 Domain of unknown function (DUF4162) NF551_14585 PF00005 ABC transporter NF551_14600 PF00456 Transketolase, thiamine diphosphate binding domain NF551_14600 PF17831 Pyruvate dehydrogenase E1 component middle domain NF551_14605 PF01614 Bacterial transcriptional regulator NF551_14605 PF09339 IclR helix-turn-helix domain NF551_14610 PF03949 Malic enzyme, NAD binding domain NF551_14610 PF00390 Malic enzyme, N-terminal domain NF551_14620 PF07883 Cupin domain NF551_14620 PF05899 Protein of unknown function (DUF861) NF551_14625 PF01261 Xylose isomerase-like TIM barrel NF551_14630 PF01979 Amidohydrolase family NF551_14655 PF00501 AMP-binding enzyme NF551_14655 PF13193 AMP-binding enzyme C-terminal domain NF551_14665 PF01575 MaoC like domain NF551_14680 PF02446 4-alpha-glucanotransferase NF551_14710 PF00171 Aldehyde dehydrogenase family NF551_14725 PF13193 AMP-binding enzyme C-terminal domain NF551_14725 PF00501 AMP-binding enzyme NF551_14735 PF00106 short chain dehydrogenase NF551_14740 PF05139 Erythromycin esterase NF551_14740 PF00156 Phosphoribosyl transferase domain NF551_14750 PF00144 Beta-lactamase NF551_14755 PF00909 Ammonium Transporter Family NF551_14760 PF03746 LamB/YcsF family NF551_14765 PF02626 Carboxyltransferase domain, subdomain A and B NF551_14770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NF551_14770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NF551_14770 PF00205 Thiamine pyrophosphate enzyme, central domain NF551_14785 PF00005 ABC transporter NF551_14790 PF02653 Branched-chain amino acid transport system / permease component NF551_14795 PF00171 Aldehyde dehydrogenase family NF551_14800 PF02627 Carboxymuconolactone decarboxylase family NF551_14810 PF05726 Pirin C-terminal cupin domain NF551_14810 PF02678 Pirin NF551_14820 PF12697 Alpha/beta hydrolase family NF551_14825 PF13426 PAS domain NF551_14825 PF00512 His Kinase A (phospho-acceptor) domain NF551_14825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NF551_14825 PF00672 HAMP domain NF551_14865 PF00128 Alpha amylase, catalytic domain NF551_14875 PF00005 ABC transporter NF551_14880 PF00528 Binding-protein-dependent transport system inner membrane component NF551_14885 PF00067 Cytochrome P450 NF551_14900 PF00248 Aldo/keto reductase family NF551_14935 PF01497 Periplasmic binding protein NF551_14940 PF01032 FecCD transport family NF551_14945 PF01032 FecCD transport family NF551_14950 PF00005 ABC transporter NF551_14955 PF04954 Siderophore-interacting protein NF551_14955 PF08021 Siderophore-interacting FAD-binding domain NF551_14960 PF11806 Domain of unknown function (DUF3327) NF551_14960 PF00756 Putative esterase NF551_14970 PF01047 MarR family NF551_14980 PF07690 Major Facilitator Superfamily NF551_15015 PF01037 Lrp/AsnC ligand binding domain NF551_15030 PF13419 Haloacid dehalogenase-like hydrolase NF551_15035 PF14759 Reductase C-terminal NF551_15035 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_15040 PF00111 2Fe-2S iron-sulfur cluster binding domain NF551_15045 PF00067 Cytochrome P450 NF551_15055 PF01614 Bacterial transcriptional regulator NF551_15055 PF09339 IclR helix-turn-helix domain NF551_15065 PF00296 Luciferase-like monooxygenase NF551_15080 PF00743 Flavin-binding monooxygenase-like NF551_15090 PF08031 Berberine and berberine like NF551_15090 PF01565 FAD binding domain NF551_15100 PF03992 Antibiotic biosynthesis monooxygenase NF551_15105 PF01613 Flavin reductase like domain NF551_15110 PF00893 Small Multidrug Resistance protein NF551_15115 PF00893 Small Multidrug Resistance protein NF551_15125 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NF551_15125 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NF551_15130 PF13520 Amino acid permease NF551_15165 PF01566 Natural resistance-associated macrophage protein NF551_15165 PF03358 NADPH-dependent FMN reductase NF551_15175 PF13732 Domain of unknown function (DUF4162) NF551_15175 PF00005 ABC transporter NF551_15180 PF00905 Penicillin binding protein transpeptidase domain NF551_15180 PF00912 Transglycosylase NF551_15220 PF01297 Zinc-uptake complex component A periplasmic NF551_15225 PF00005 ABC transporter NF551_15230 PF00950 ABC 3 transport family NF551_15240 PF00403 Heavy-metal-associated domain NF551_15245 PF00005 ABC transporter NF551_15245 PF13732 Domain of unknown function (DUF4162) NF551_15260 PF02909 Tetracyclin repressor-like, C-terminal domain NF551_15260 PF00440 Bacterial regulatory proteins, tetR family NF551_15265 PF00248 Aldo/keto reductase family NF551_15290 PF00005 ABC transporter NF551_15295 PF01497 Periplasmic binding protein NF551_15300 PF01032 FecCD transport family NF551_15305 PF02223 Thymidylate kinase NF551_15310 PF00561 alpha/beta hydrolase fold NF551_15320 PF00890 FAD binding domain NF551_15325 PF07690 Major Facilitator Superfamily NF551_15325 PF00083 Sugar (and other) transporter NF551_15335 PF00890 FAD binding domain NF551_15340 PF01614 Bacterial transcriptional regulator NF551_15340 PF09339 IclR helix-turn-helix domain NF551_15355 PF02560 Cyanate lyase C-terminal domain NF551_15360 PF01226 Formate/nitrite transporter NF551_15400 PF00005 ABC transporter NF551_15420 PF01557 Fumarylacetoacetate (FAA) hydrolase family NF551_15425 PF07729 FCD domain NF551_15425 PF00392 Bacterial regulatory proteins, gntR family NF551_15430 PF00171 Aldehyde dehydrogenase family NF551_15435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NF551_15450 PF00067 Cytochrome P450 NF551_15455 PF00067 Cytochrome P450 NF551_15465 PF00528 Binding-protein-dependent transport system inner membrane component NF551_15470 PF00005 ABC transporter NF551_15470 PF08402 TOBE domain NF551_15495 PF01547 Bacterial extracellular solute-binding protein NF551_15500 PF00528 Binding-protein-dependent transport system inner membrane component NF551_15505 PF00528 Binding-protein-dependent transport system inner membrane component NF551_15510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NF551_15510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NF551_15525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NF551_15525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NF551_15530 PF13407 Periplasmic binding protein domain NF551_15535 PF00005 ABC transporter NF551_15540 PF02653 Branched-chain amino acid transport system / permease component NF551_15550 PF00480 ROK family NF551_15550 PF01325 Iron dependent repressor, N-terminal DNA binding domain NF551_15560 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase NF551_15570 PF01026 TatD related DNase NF551_15580 PF01040 UbiA prenyltransferase family NF551_15590 PF01047 MarR family NF551_15590 PF00480 ROK family NF551_15600 PF08240 Alcohol dehydrogenase GroES-like domain NF551_15600 PF13823 Alcohol dehydrogenase GroES-associated NF551_15600 PF00107 Zinc-binding dehydrogenase NF551_15610 PF01544 CorA-like Mg2+ transporter protein NF551_15620 PF00083 Sugar (and other) transporter NF551_15640 PF02770 Acyl-CoA dehydrogenase, middle domain NF551_15640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NF551_15640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NF551_15655 PF00582 Universal stress protein family NF551_15660 PF07690 Major Facilitator Superfamily NF551_15665 PF08361 MAATS-type transcriptional repressor, C-terminal region NF551_15665 PF00440 Bacterial regulatory proteins, tetR family NF551_15670 PF03737 Aldolase/RraA NF551_15680 PF03328 HpcH/HpaI aldolase/citrate lyase family NF551_15685 PF00860 Permease family NF551_15690 PF01014 Uricase NF551_15695 PF00576 HIUase/Transthyretin family NF551_15705 PF01979 Amidohydrolase family NF551_15710 PF13478 XdhC Rossmann domain NF551_15710 PF02625 XdhC and CoxI family NF551_15720 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NF551_15720 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NF551_15720 PF01799 [2Fe-2S] binding domain NF551_15730 PF03176 MMPL family NF551_15740 PF01565 FAD binding domain NF551_15740 PF02913 FAD linked oxidases, C-terminal domain NF551_15745 PF02652 L-lactate permease NF551_15755 PF01235 Sodium:alanine symporter family NF551_15770 PF03315 Serine dehydratase beta chain NF551_15770 PF03313 Serine dehydratase alpha chain NF551_15775 PF00464 Serine hydroxymethyltransferase NF551_15780 PF01597 Glycine cleavage H-protein NF551_15785 PF08669 Glycine cleavage T-protein C-terminal barrel domain NF551_15785 PF01571 Aminomethyltransferase folate-binding domain NF551_15790 PF02347 Glycine cleavage system P-protein NF551_15795 PF00324 Amino acid permease NF551_15825 PF03780 Asp23 family, cell envelope-related function NF551_15830 PF01274 Malate synthase NF551_15835 PF08240 Alcohol dehydrogenase GroES-like domain NF551_15835 PF00107 Zinc-binding dehydrogenase NF551_15845 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NF551_15845 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NF551_15850 PF07690 Major Facilitator Superfamily NF551_15855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NF551_15855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NF551_15870 PF00199 Catalase NF551_15870 PF06628 Catalase-related immune-responsive NF551_15870 PF18011 C-terminal domain found in long catalases NF551_15890 PF00155 Aminotransferase class I and II NF551_15900 PF02817 e3 binding domain NF551_15900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NF551_15900 PF00364 Biotin-requiring enzyme NF551_15905 PF02779 Transketolase, pyrimidine binding domain NF551_15905 PF02780 Transketolase, C-terminal domain NF551_15910 PF00676 Dehydrogenase E1 component NF551_15915 PF00155 Aminotransferase class I and II NF551_15920 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NF551_15935 PF08328 Adenylosuccinate lyase C-terminal NF551_15935 PF00206 Lyase NF551_15945 PF04055 Radical SAM superfamily NF551_15975 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NF551_15985 PF07690 Major Facilitator Superfamily NF551_15990 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NF551_15990 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NF551_15995 PF00753 Metallo-beta-lactamase superfamily NF551_15995 PF16123 Hydroxyacylglutathione hydrolase C-terminus NF551_16000 PF07859 alpha/beta hydrolase fold NF551_16005 PF01494 FAD binding domain NF551_16020 PF07690 Major Facilitator Superfamily NF551_16025 PF00067 Cytochrome P450 NF551_16035 PF14759 Reductase C-terminal NF551_16035 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_16040 PF08361 MAATS-type transcriptional repressor, C-terminal region NF551_16040 PF00440 Bacterial regulatory proteins, tetR family NF551_16045 PF05199 GMC oxidoreductase NF551_16045 PF00732 GMC oxidoreductase NF551_16050 PF00171 Aldehyde dehydrogenase family NF551_16060 PF08240 Alcohol dehydrogenase GroES-like domain NF551_16060 PF00107 Zinc-binding dehydrogenase NF551_16065 PF00528 Binding-protein-dependent transport system inner membrane component NF551_16070 PF00528 Binding-protein-dependent transport system inner membrane component NF551_16080 PF04198 Putative sugar-binding domain NF551_16095 PF01232 Mannitol dehydrogenase Rossmann domain NF551_16095 PF08125 Mannitol dehydrogenase C-terminal domain NF551_16105 PF12849 PBP superfamily domain NF551_16115 PF12833 Helix-turn-helix domain NF551_16115 PF00730 HhH-GPD superfamily base excision DNA repair protein NF551_16115 PF02805 Metal binding domain of Ada NF551_16115 PF06029 AlkA N-terminal domain NF551_16120 PF13532 2OG-Fe(II) oxygenase superfamily NF551_16125 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NF551_16125 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NF551_16130 PF12680 SnoaL-like domain NF551_16130 PF04542 Sigma-70 region 2 NF551_16130 PF08281 Sigma-70, region 4 NF551_16135 PF00004 ATPase family associated with various cellular activities (AAA) NF551_16135 PF17862 AAA+ lid domain NF551_16135 PF01434 Peptidase family M41 NF551_16140 PF13193 AMP-binding enzyme C-terminal domain NF551_16140 PF00501 AMP-binding enzyme NF551_16145 PF01575 MaoC like domain NF551_16150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NF551_16150 PF02770 Acyl-CoA dehydrogenase, middle domain NF551_16150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NF551_16160 PF00106 short chain dehydrogenase NF551_16165 PF01740 STAS domain NF551_16165 PF00916 Sulfate permease family NF551_16175 PF00701 Dihydrodipicolinate synthetase family NF551_16180 PF18146 Damage-inducible protein CinA KH domain NF551_16180 PF02464 Competence-damaged protein NF551_16180 PF00994 Probable molybdopterin binding domain NF551_16190 PF13439 Glycosyltransferase Family 4 NF551_16190 PF00534 Glycosyl transferases group 1 NF551_16200 PF02709 N-terminal domain of galactosyltransferase NF551_16200 PF00535 Glycosyl transferase family 2 NF551_16210 PF05067 Manganese containing catalase NF551_16215 PF00440 Bacterial regulatory proteins, tetR family NF551_16220 PF13193 AMP-binding enzyme C-terminal domain NF551_16220 PF00501 AMP-binding enzyme NF551_16255 PF01554 MatE NF551_16260 PF07690 Major Facilitator Superfamily NF551_16275 PF02597 ThiS family NF551_16280 PF06737 Transglycosylase-like domain NF551_16285 PF13520 Amino acid permease NF551_16295 PF00772 DnaB-like helicase N terminal domain NF551_16295 PF03796 DnaB-like helicase C terminal domain NF551_16300 PF03948 Ribosomal protein L9, C-terminal domain NF551_16300 PF01281 Ribosomal protein L9, N-terminal domain NF551_16305 PF01084 Ribosomal protein S18 NF551_16310 PF00436 Single-strand binding protein family NF551_16315 PF01250 Ribosomal protein S6 NF551_16320 PF02127 Aminopeptidase I zinc metalloprotease (M18) NF551_16330 PF00005 ABC transporter NF551_16340 PF00005 ABC transporter NF551_16345 PF01061 ABC-2 type transporter NF551_16350 PF00005 ABC transporter NF551_16350 PF13732 Domain of unknown function (DUF4162) NF551_16355 PF07690 Major Facilitator Superfamily NF551_16360 PF12848 ABC transporter NF551_16360 PF16326 ABC transporter C-terminal domain NF551_16360 PF00005 ABC transporter NF551_16400 PF01658 Myo-inositol-1-phosphate synthase NF551_16405 PF01268 Formate--tetrahydrofolate ligase NF551_16410 PF00534 Glycosyl transferases group 1 NF551_16410 PF13439 Glycosyltransferase Family 4 NF551_16415 PF00300 Histidine phosphatase superfamily (branch 1) NF551_16420 PF12627 Probable RNA and SrmB- binding site of polymerase A NF551_16420 PF01743 Poly A polymerase head domain NF551_16420 PF01966 HD domain NF551_16425 PF00293 NUDIX domain NF551_16430 PF03023 Lipid II flippase MurJ NF551_16440 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_16445 PF00085 Thioredoxin NF551_16450 PF01520 N-acetylmuramoyl-L-alanine amidase NF551_16450 PF01471 Putative peptidoglycan binding domain NF551_16470 PF17762 HTH domain found in ParB protein NF551_16470 PF02195 ParB-like nuclease domain NF551_16475 PF13614 AAA domain NF551_16480 PF02527 rRNA small subunit methyltransferase G NF551_16490 PF02096 60Kd inner membrane protein NF551_16495 PF01809 Putative membrane protein insertion efficiency factor NF551_16500 PF00825 Ribonuclease P NF551_16505 PF00468 Ribosomal protein L34 NF551_16510 PF07015 VirC1 protein NF551_16550 PF12826 Helix-hairpin-helix motif NF551_16550 PF03120 NAD-dependent DNA ligase OB-fold domain NF551_16550 PF01653 NAD-dependent DNA ligase adenylation domain NF551_16550 PF00533 BRCA1 C Terminus (BRCT) domain NF551_16560 PF12826 Helix-hairpin-helix motif NF551_16560 PF03120 NAD-dependent DNA ligase OB-fold domain NF551_16560 PF01653 NAD-dependent DNA ligase adenylation domain NF551_16560 PF00533 BRCA1 C Terminus (BRCT) domain NF551_16645 PF01555 DNA methylase NF551_16740 PF07804 HipA-like C-terminal domain NF551_16740 PF13657 HipA N-terminal domain NF551_16775 PF02661 Fic/DOC family NF551_16775 PF13784 Fic/DOC family N-terminal NF551_16815 PF08310 LGFP repeat NF551_16815 PF00756 Putative esterase NF551_16835 PF00482 Type II secretion system (T2SS), protein F NF551_16870 PF00437 Type II/IV secretion system protein NF551_16870 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NF551_16875 PF00437 Type II/IV secretion system protein NF551_16915 PF00437 Type II/IV secretion system protein NF551_16920 PF00437 Type II/IV secretion system protein NF551_16985 PF12826 Helix-hairpin-helix motif NF551_16985 PF03120 NAD-dependent DNA ligase OB-fold domain NF551_16985 PF01653 NAD-dependent DNA ligase adenylation domain NF551_16985 PF00533 BRCA1 C Terminus (BRCT) domain NF551_17000 PF00075 RNase H NF551_17045 PF00239 Resolvase, N terminal domain NF551_17045 PF02796 Helix-turn-helix domain of resolvase NF551_17120 PF04012 PspA/IM30 family NF551_17160 PF01464 Transglycosylase SLT domain NF551_17200 PF01757 Acyltransferase family NF551_17220 PF01966 HD domain NF551_17220 PF01743 Poly A polymerase head domain NF551_17220 PF12627 Probable RNA and SrmB- binding site of polymerase A NF551_17270 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NF551_17295 PF00005 ABC transporter NF551_17295 PF13732 Domain of unknown function (DUF4162) NF551_17300 PF04545 Sigma-70, region 4 NF551_17300 PF04539 Sigma-70 region 3 NF551_17300 PF04542 Sigma-70 region 2 NF551_17300 PF00140 Sigma-70 factor, region 1.2 NF551_17315 PF07992 Pyridine nucleotide-disulphide oxidoreductase NF551_17395 PF00692 dUTPase NF551_17650 PF00344 SecY translocase NF551_17655 PF03840 Preprotein translocase SecG subunit NF551_17680 PF00186 Dihydrofolate reductase NF551_17685 PF06689 ClpX C4-type zinc finger NF551_17685 PF10431 C-terminal, D2-small domain, of ClpB protein NF551_17685 PF07724 AAA domain (Cdc48 subfamily) NF551_17700 PF00717 Peptidase S24-like NF551_17705 PF11798 IMS family HHH motif NF551_17705 PF11799 impB/mucB/samB family C-terminal domain NF551_17705 PF00817 impB/mucB/samB family NF551_17705 PF13438 Domain of unknown function (DUF4113) NF551_17725 PF01594 AI-2E family transporter NF551_17750 PF00303 Thymidylate synthase NF551_17755 PF00999 Sodium/hydrogen exchanger family NF551_17810 PF00437 Type II/IV secretion system protein NF551_17860 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NF551_17865 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NF551_17865 PF14572 Phosphoribosyl synthetase-associated domain NF551_17945 PF03738 Glutathionylspermidine synthase preATP-grasp NF551_17995 PF01139 tRNA-splicing ligase RtcB NF551_18080 PF00268 Ribonucleotide reductase, small chain NF551_18090 PF02867 Ribonucleotide reductase, barrel domain NF551_18090 PF00317 Ribonucleotide reductase, all-alpha domain NF551_18090 PF08343 Ribonucleotide reductase N-terminal NF551_18095 PF07972 NrdI Flavodoxin like NF551_18105 PF02811 PHP domain NF551_18105 PF07733 Bacterial DNA polymerase III alpha NTPase domain NF551_18105 PF00929 Exonuclease NF551_18105 PF14579 Helix-hairpin-helix motif NF551_18105 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NF551_18130 PF07733 Bacterial DNA polymerase III alpha NTPase domain NF551_18130 PF14579 Helix-hairpin-helix motif NF551_18130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NF551_18130 PF02811 PHP domain NF551_18135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NF551_18135 PF14579 Helix-hairpin-helix motif NF551_18135 PF02811 PHP domain NF551_18135 PF07733 Bacterial DNA polymerase III alpha NTPase domain NF551_18200 PF01145 SPFH domain / Band 7 family NF551_18200 PF15975 Flotillin NF551_18220 PF01464 Transglycosylase SLT domain NF551_18220 PF10145 Phage-related minor tail protein NF551_18220 PF01551 Peptidase family M23 NF551_18260 PF13307 Helicase C-terminal domain NF551_18320 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NF551_18330 PF01556 DnaJ C terminal domain NF551_18330 PF00226 DnaJ domain NF551_18330 PF00684 DnaJ central domain NF551_18360 PF00905 Penicillin binding protein transpeptidase domain NF551_18360 PF00912 Transglycosylase NF551_18400 PF00533 BRCA1 C Terminus (BRCT) domain NF551_18400 PF01653 NAD-dependent DNA ligase adenylation domain NF551_18400 PF12826 Helix-hairpin-helix motif NF551_18400 PF03120 NAD-dependent DNA ligase OB-fold domain NF551_18535 PF00929 Exonuclease NF551_18680 PF04545 Sigma-70, region 4 NF551_18680 PF00140 Sigma-70 factor, region 1.2 NF551_18680 PF04542 Sigma-70 region 2 NF551_18680 PF04539 Sigma-70 region 3 NF551_18745 PF04679 ATP dependent DNA ligase C terminal region NF551_18745 PF01068 ATP dependent DNA ligase domain NF551_18745 PF04675 DNA ligase N terminus NF551_18895 PF17854 FtsK alpha domain NF551_18895 PF09397 Ftsk gamma domain NF551_18895 PF01580 FtsK/SpoIIIE family