locus-tag class description AYWB_001 PF00308 Bacterial dnaA protein AYWB_001 PF11638 DnaA N-terminal domain AYWB_001 PF08299 Bacterial dnaA protein helix-turn-helix AYWB_002 PF00712 DNA polymerase III beta subunit, N-terminal domain AYWB_002 PF02768 DNA polymerase III beta subunit, C-terminal domain AYWB_003 PF01250 Ribosomal protein S6 AYWB_004 PF00436 Single-strand binding protein family AYWB_005 PF01084 Ribosomal protein S18 AYWB_006 PF02272 DHHA1 domain AYWB_006 PF03948 Ribosomal protein L9, C-terminal domain AYWB_006 PF01281 Ribosomal protein L9, N-terminal domain AYWB_006 PF01368 DHH family AYWB_007 PF03796 DnaB-like helicase C terminal domain AYWB_007 PF00772 DnaB-like helicase N terminal domain AYWB_008 PF03462 PCRF domain AYWB_008 PF00472 RF-1 domain AYWB_009 PF01300 Telomere recombination AYWB_011 PF01926 50S ribosome-binding GTPase AYWB_012 PF08264 Anticodon-binding domain of tRNA AYWB_012 PF00133 tRNA synthetases class I (I, L, M and V) AYWB_013 PF07155 ECF-type riboflavin transporter, S component AYWB_014 PF12558 ATP-binding cassette cobalt transporter AYWB_014 PF00005 ABC transporter AYWB_016 PF17820 PDZ domain AYWB_016 PF13180 PDZ domain AYWB_017 PF00011 Hsp20/alpha crystallin family AYWB_018 PF00690 Cation transporter/ATPase, N-terminus AYWB_018 PF00689 Cation transporting ATPase, C-terminus AYWB_019 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_019 PF17862 AAA+ lid domain AYWB_019 PF01434 Peptidase family M41 AYWB_025 PF08343 Ribonucleotide reductase N-terminal AYWB_025 PF00317 Ribonucleotide reductase, all-alpha domain AYWB_025 PF02867 Ribonucleotide reductase, barrel domain AYWB_026 PF00268 Ribonucleotide reductase, small chain AYWB_027 PF01741 Large-conductance mechanosensitive channel, MscL AYWB_028 PF00664 ABC transporter transmembrane region AYWB_028 PF00005 ABC transporter AYWB_029 PF00664 ABC transporter transmembrane region AYWB_029 PF00005 ABC transporter AYWB_043 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYWB_043 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYWB_043 PF03129 Anticodon binding domain AYWB_048 PF10410 DnaB-helicase binding domain of primase AYWB_048 PF08275 DNA primase catalytic core, N-terminal domain AYWB_048 PF01807 CHC2 zinc finger AYWB_051 PF03949 Malic enzyme, NAD binding domain AYWB_051 PF00390 Malic enzyme, N-terminal domain AYWB_052 PF03390 2-hydroxycarboxylate transporter family AYWB_053 PF01066 CDP-alcohol phosphatidyltransferase AYWB_054 PF00270 DEAD/DEAH box helicase AYWB_054 PF00271 Helicase conserved C-terminal domain AYWB_059 PF01628 HrcA protein C terminal domain AYWB_060 PF01025 GrpE AYWB_061 PF00012 Hsp70 protein AYWB_062 PF00684 DnaJ central domain AYWB_062 PF01556 DnaJ C terminal domain AYWB_062 PF00226 DnaJ domain AYWB_064 PF00448 SRP54-type protein, GTPase domain AYWB_064 PF02881 SRP54-type protein, helical bundle domain AYWB_065 PF02978 Signal peptide binding domain AYWB_065 PF02881 SRP54-type protein, helical bundle domain AYWB_065 PF00448 SRP54-type protein, GTPase domain AYWB_066 PF01367 5'-3' exonuclease, C-terminal SAM fold AYWB_066 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AYWB_066 PF00476 DNA polymerase family A AYWB_067 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AYWB_067 PF06827 Zinc finger found in FPG and IleRS AYWB_067 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AYWB_070 PF00313 'Cold-shock' DNA-binding domain AYWB_074 PF02223 Thymidylate kinase AYWB_085 PF12705 PD-(D/E)XK nuclease superfamily AYWB_085 PF00580 UvrD/REP helicase N-terminal domain AYWB_085 PF13361 UvrD-like helicase C-terminal domain AYWB_087 PF01807 CHC2 zinc finger AYWB_087 PF10410 DnaB-helicase binding domain of primase AYWB_087 PF08275 DNA primase catalytic core, N-terminal domain AYWB_090 PF02734 DAK2 domain AYWB_090 PF13684 Dihydroxyacetone kinase family AYWB_092 PF13416 Bacterial extracellular solute-binding protein AYWB_093 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_094 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_095 PF08402 TOBE domain AYWB_095 PF00005 ABC transporter AYWB_096 PF01434 Peptidase family M41 AYWB_096 PF17862 AAA+ lid domain AYWB_096 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_098 PF00753 Metallo-beta-lactamase superfamily AYWB_098 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AYWB_098 PF17770 Ribonuclease J C-terminal domain AYWB_100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AYWB_101 PF17770 Ribonuclease J C-terminal domain AYWB_101 PF00753 Metallo-beta-lactamase superfamily AYWB_101 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AYWB_103 PF01351 Ribonuclease HII AYWB_103 PF11858 Domain of unknown function (DUF3378) AYWB_104 PF01230 HIT domain AYWB_107 PF04545 Sigma-70, region 4 AYWB_107 PF04539 Sigma-70 region 3 AYWB_107 PF04542 Sigma-70 region 2 AYWB_107 PF00140 Sigma-70 factor, region 1.2 AYWB_107 PF03979 Sigma-70 factor, region 1.1 AYWB_108 PF00772 DnaB-like helicase N terminal domain AYWB_108 PF08275 DNA primase catalytic core, N-terminal domain AYWB_108 PF01807 CHC2 zinc finger AYWB_109 PF03129 Anticodon binding domain AYWB_109 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYWB_110 PF07650 KH domain AYWB_110 PF01926 50S ribosome-binding GTPase AYWB_111 PF02130 Uncharacterized protein family UPF0054 AYWB_112 PF01165 Ribosomal protein S21 AYWB_115 PF00580 UvrD/REP helicase N-terminal domain AYWB_115 PF13361 UvrD-like helicase C-terminal domain AYWB_116 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AYWB_116 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYWB_117 PF12169 DNA polymerase III subunits gamma and tau domain III AYWB_120 PF01066 CDP-alcohol phosphatidyltransferase AYWB_121 PF02666 Phosphatidylserine decarboxylase AYWB_122 PF00117 Glutamine amidotransferase class-I AYWB_122 PF06418 CTP synthase N-terminus AYWB_125 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_128 PF00152 tRNA synthetases class II (D, K and N) AYWB_128 PF01336 OB-fold nucleic acid binding domain AYWB_129 PF02811 PHP domain AYWB_129 PF01336 OB-fold nucleic acid binding domain AYWB_129 PF14579 Helix-hairpin-helix motif AYWB_129 PF07733 Bacterial DNA polymerase III alpha NTPase domain AYWB_129 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AYWB_130 PF00733 Asparagine synthase AYWB_130 PF13537 Glutamine amidotransferase domain AYWB_133 PF01409 tRNA synthetases class II core domain (F) AYWB_133 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AYWB_134 PF03484 tRNA synthetase B5 domain AYWB_134 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AYWB_134 PF01588 Putative tRNA binding domain AYWB_134 PF03147 Ferredoxin-fold anticodon binding domain AYWB_134 PF03483 B3/4 domain AYWB_135 PF00005 ABC transporter AYWB_136 PF00676 Dehydrogenase E1 component AYWB_137 PF02780 Transketolase, C-terminal domain AYWB_137 PF02779 Transketolase, pyrimidine binding domain AYWB_138 PF02817 e3 binding domain AYWB_138 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYWB_138 PF00364 Biotin-requiring enzyme AYWB_139 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYWB_140 PF01026 TatD related DNase AYWB_142 PF02504 Fatty acid synthesis protein AYWB_143 PF14622 Ribonuclease-III-like AYWB_143 PF00035 Double-stranded RNA binding motif AYWB_150 PF00436 Single-strand binding protein family AYWB_151 PF00799 Geminivirus Rep catalytic domain AYWB_175 PF13276 HTH-like domain AYWB_175 PF00665 Integrase core domain AYWB_175 PF13333 Integrase core domain AYWB_178 PF01807 CHC2 zinc finger AYWB_178 PF08275 DNA primase catalytic core, N-terminal domain AYWB_178 PF10410 DnaB-helicase binding domain of primase AYWB_179 PF00772 DnaB-like helicase N terminal domain AYWB_179 PF03796 DnaB-like helicase C terminal domain AYWB_181 PF02223 Thymidylate kinase AYWB_187 PF01434 Peptidase family M41 AYWB_187 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_187 PF17862 AAA+ lid domain AYWB_193 PF00436 Single-strand binding protein family AYWB_209 PF00436 Single-strand binding protein family AYWB_210 PF00216 Bacterial DNA-binding protein AYWB_213 PF01434 Peptidase family M41 AYWB_213 PF06480 FtsH Extracellular AYWB_213 PF17862 AAA+ lid domain AYWB_213 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_219 PF10410 DnaB-helicase binding domain of primase AYWB_219 PF08275 DNA primase catalytic core, N-terminal domain AYWB_219 PF01807 CHC2 zinc finger AYWB_229 PF17862 AAA+ lid domain AYWB_229 PF01434 Peptidase family M41 AYWB_229 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_230 PF00216 Bacterial DNA-binding protein AYWB_232 PF00436 Single-strand binding protein family AYWB_241 PF01479 S4 domain AYWB_241 PF00163 Ribosomal protein S4/S9 N-terminal domain AYWB_242 PF00689 Cation transporting ATPase, C-terminus AYWB_242 PF00690 Cation transporter/ATPase, N-terminus AYWB_243 PF02457 DisA bacterial checkpoint controller nucleotide-binding AYWB_244 PF02645 Uncharacterised protein, DegV family COG1307 AYWB_246 PF00809 Pterin binding enzyme AYWB_249 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AYWB_250 PF00814 Glycoprotease family AYWB_251 PF00814 Glycoprotease family AYWB_252 PF00814 Glycoprotease family AYWB_254 PF00521 DNA gyrase/topoisomerase IV, subunit A AYWB_254 PF03989 DNA gyrase C-terminal domain, beta-propeller AYWB_255 PF00986 DNA gyrase B subunit, carboxyl terminus AYWB_255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYWB_255 PF00204 DNA gyrase B AYWB_255 PF01751 Toprim domain AYWB_262 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_263 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYWB_264 PF00005 ABC transporter AYWB_271 PF00436 Single-strand binding protein family AYWB_275 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_275 PF01434 Peptidase family M41 AYWB_275 PF17862 AAA+ lid domain AYWB_282 PF02223 Thymidylate kinase AYWB_285 PF08275 DNA primase catalytic core, N-terminal domain AYWB_285 PF10410 DnaB-helicase binding domain of primase AYWB_285 PF01807 CHC2 zinc finger AYWB_287 PF13276 HTH-like domain AYWB_287 PF13333 Integrase core domain AYWB_287 PF00665 Integrase core domain AYWB_288 PF16193 AAA C-terminal domain AYWB_288 PF12002 MgsA AAA+ ATPase C terminal AYWB_288 PF05496 Holliday junction DNA helicase RuvB P-loop domain AYWB_289 PF00665 Integrase core domain AYWB_289 PF13276 HTH-like domain AYWB_289 PF13333 Integrase core domain AYWB_298 PF13333 Integrase core domain AYWB_298 PF00665 Integrase core domain AYWB_298 PF13276 HTH-like domain AYWB_302 PF00293 NUDIX domain AYWB_304 PF07516 SecA Wing and Scaffold domain AYWB_304 PF07517 SecA DEAD-like domain AYWB_304 PF01043 SecA preprotein cross-linking domain AYWB_305 PF00472 RF-1 domain AYWB_305 PF03462 PCRF domain AYWB_306 PF00886 Ribosomal protein S16 AYWB_307 PF01746 tRNA (Guanine-1)-methyltransferase AYWB_308 PF01245 Ribosomal protein L19 AYWB_309 PF00579 tRNA synthetases class I (W and Y) AYWB_310 PF00266 Aminotransferase class-V AYWB_311 PF01592 NifU-like N terminal domain AYWB_312 PF00579 tRNA synthetases class I (W and Y) AYWB_313 PF07733 Bacterial DNA polymerase III alpha NTPase domain AYWB_313 PF00929 Exonuclease AYWB_313 PF02811 PHP domain AYWB_313 PF14579 Helix-hairpin-helix motif AYWB_313 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AYWB_313 PF14480 DNA polymerase III polC-type N-terminus I AYWB_313 PF11490 DNA polymerase III polC-type N-terminus II AYWB_314 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_316 PF05746 DALR anticodon binding domain AYWB_316 PF00750 tRNA synthetases class I (R) AYWB_316 PF03485 Arginyl tRNA synthetase N terminal domain AYWB_317 PF01261 Xylose isomerase-like TIM barrel AYWB_318 PF00270 DEAD/DEAH box helicase AYWB_318 PF00271 Helicase conserved C-terminal domain AYWB_320 PF02660 Glycerol-3-phosphate acyltransferase AYWB_321 PF01653 NAD-dependent DNA ligase adenylation domain AYWB_321 PF12826 Helix-hairpin-helix motif AYWB_321 PF03120 NAD-dependent DNA ligase OB-fold domain AYWB_321 PF00533 BRCA1 C Terminus (BRCT) domain AYWB_322 PF02650 WhiA C-terminal HTH domain AYWB_322 PF10298 WhiA N-terminal LAGLIDADG-like domain AYWB_322 PF14527 WhiA LAGLIDADG-like domain AYWB_323 PF01648 4'-phosphopantetheinyl transferase superfamily AYWB_324 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYWB_324 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYWB_326 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AYWB_326 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AYWB_327 PF01029 NusB family AYWB_330 PF00679 Elongation factor G C-terminus AYWB_330 PF03144 Elongation factor Tu domain 2 AYWB_330 PF06421 GTP-binding protein LepA C-terminus AYWB_330 PF00009 Elongation factor Tu GTP binding domain AYWB_331 PF01523 Putative modulator of DNA gyrase AYWB_333 PF02190 ATP-dependent protease La (LON) substrate-binding domain AYWB_333 PF05362 Lon protease (S16) C-terminal proteolytic domain AYWB_333 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_334 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYWB_334 PF05698 Bacterial trigger factor protein (TF) C-terminus AYWB_334 PF05697 Bacterial trigger factor protein (TF) AYWB_336 PF00005 ABC transporter AYWB_336 PF17755 UvrA DNA-binding domain AYWB_336 PF17760 UvrA interaction domain AYWB_350 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_350 PF17862 AAA+ lid domain AYWB_350 PF01434 Peptidase family M41 AYWB_360 PF13276 HTH-like domain AYWB_360 PF13333 Integrase core domain AYWB_360 PF00665 Integrase core domain AYWB_365 PF00665 Integrase core domain AYWB_365 PF13276 HTH-like domain AYWB_365 PF13333 Integrase core domain AYWB_374 PF01434 Peptidase family M41 AYWB_374 PF17862 AAA+ lid domain AYWB_374 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_375 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_375 PF05362 Lon protease (S16) C-terminal proteolytic domain AYWB_375 PF02190 ATP-dependent protease La (LON) substrate-binding domain AYWB_377 PF00216 Bacterial DNA-binding protein AYWB_378 PF00436 Single-strand binding protein family AYWB_379 PF02086 D12 class N6 adenine-specific DNA methyltransferase AYWB_381 PF00436 Single-strand binding protein family AYWB_389 PF00772 DnaB-like helicase N terminal domain AYWB_389 PF03796 DnaB-like helicase C terminal domain AYWB_397 PF00881 Nitroreductase family AYWB_398 PF01541 GIY-YIG catalytic domain AYWB_398 PF08459 UvrC Helix-hairpin-helix N-terminal AYWB_399 PF12344 Ultra-violet resistance protein B AYWB_399 PF02151 UvrB/uvrC motif AYWB_399 PF04851 Type III restriction enzyme, res subunit AYWB_399 PF00271 Helicase conserved C-terminal domain AYWB_399 PF17757 UvrB interaction domain AYWB_403 PF00910 RNA helicase AYWB_403 PF01719 Plasmid replication protein AYWB_409 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_409 PF17862 AAA+ lid domain AYWB_409 PF01434 Peptidase family M41 AYWB_409 PF06480 FtsH Extracellular AYWB_412 PF03099 Biotin/lipoate A/B protein ligase family AYWB_412 PF10437 Bacterial lipoate protein ligase C-terminus AYWB_414 PF01434 Peptidase family M41 AYWB_414 PF17862 AAA+ lid domain AYWB_414 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_415 PF00398 Ribosomal RNA adenine dimethylase AYWB_416 PF02272 DHHA1 domain AYWB_416 PF01411 tRNA synthetases class II (A) AYWB_416 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYWB_418 PF03652 Holliday junction resolvase AYWB_420 PF03449 Transcription elongation factor, N-terminal AYWB_420 PF01272 Transcription elongation factor, GreA/GreB, C-term AYWB_425 PF03672 Uncharacterised protein family (UPF0154) AYWB_429 PF00186 Dihydrofolate reductase AYWB_430 PF00303 Thymidylate synthase AYWB_431 PF01546 Peptidase family M20/M25/M40 AYWB_434 PF00391 PEP-utilising enzyme, mobile domain AYWB_434 PF00224 Pyruvate kinase, barrel domain AYWB_434 PF02887 Pyruvate kinase, alpha/beta domain AYWB_435 PF03390 2-hydroxycarboxylate transporter family AYWB_436 PF01676 Metalloenzyme superfamily AYWB_436 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AYWB_437 PF03952 Enolase, N-terminal domain AYWB_437 PF00113 Enolase, C-terminal TIM barrel domain AYWB_438 PF00342 Phosphoglucose isomerase AYWB_440 PF00365 Phosphofructokinase AYWB_442 PF01131 DNA topoisomerase AYWB_442 PF01396 Topoisomerase DNA binding C4 zinc finger AYWB_442 PF01751 Toprim domain AYWB_443 PF01926 50S ribosome-binding GTPase AYWB_445 PF09285 Elongation factor P, C-terminal AYWB_445 PF01132 Elongation factor P (EF-P) OB domain AYWB_445 PF08207 Elongation factor P (EF-P) KOW-like domain AYWB_447 PF13277 YmdB-like protein AYWB_448 PF00013 KH domain AYWB_448 PF12072 Domain of unknown function (DUF3552) AYWB_448 PF01966 HD domain AYWB_450 PF02646 RmuC family AYWB_453 PF01134 Glucose inhibited division protein A AYWB_453 PF13932 GidA associated domain AYWB_454 PF02527 rRNA small subunit methyltransferase G AYWB_456 PF03144 Elongation factor Tu domain 2 AYWB_456 PF00009 Elongation factor Tu GTP binding domain AYWB_456 PF03143 Elongation factor Tu C-terminal domain AYWB_457 PF03144 Elongation factor Tu domain 2 AYWB_457 PF00009 Elongation factor Tu GTP binding domain AYWB_457 PF03764 Elongation factor G, domain IV AYWB_457 PF14492 Elongation Factor G, domain II AYWB_457 PF00679 Elongation factor G C-terminus AYWB_458 PF00177 Ribosomal protein S7p/S5e AYWB_459 PF00164 Ribosomal protein S12/S23 AYWB_460 PF05000 RNA polymerase Rpb1, domain 4 AYWB_460 PF04983 RNA polymerase Rpb1, domain 3 AYWB_460 PF04997 RNA polymerase Rpb1, domain 1 AYWB_460 PF04998 RNA polymerase Rpb1, domain 5 AYWB_460 PF00623 RNA polymerase Rpb1, domain 2 AYWB_461 PF04563 RNA polymerase beta subunit AYWB_461 PF04561 RNA polymerase Rpb2, domain 2 AYWB_461 PF04560 RNA polymerase Rpb2, domain 7 AYWB_461 PF04565 RNA polymerase Rpb2, domain 3 AYWB_461 PF00562 RNA polymerase Rpb2, domain 6 AYWB_461 PF10385 RNA polymerase beta subunit external 1 domain AYWB_462 PF16320 Ribosomal protein L7/L12 dimerisation domain AYWB_462 PF00542 Ribosomal protein L7/L12 C-terminal domain AYWB_463 PF00466 Ribosomal protein L10 AYWB_464 PF00687 Ribosomal protein L1p/L10e family AYWB_465 PF00298 Ribosomal protein L11, RNA binding domain AYWB_465 PF03946 Ribosomal protein L11, N-terminal domain AYWB_466 PF02357 Transcription termination factor nusG AYWB_466 PF00467 KOW motif AYWB_468 PF00588 SpoU rRNA Methylase family AYWB_468 PF08032 RNA 2'-O ribose methyltransferase substrate binding AYWB_470 PF01138 3' exoribonuclease family, domain 1 AYWB_470 PF00013 KH domain AYWB_470 PF03725 3' exoribonuclease family, domain 2 AYWB_472 PF02096 60Kd inner membrane protein AYWB_473 PF00825 Ribonuclease P AYWB_474 PF00468 Ribosomal protein L34 AYWB_475 PF03129 Anticodon binding domain AYWB_475 PF09180 Prolyl-tRNA synthetase, C-terminal AYWB_475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYWB_476 PF00471 Ribosomal protein L33 AYWB_479 PF00216 Bacterial DNA-binding protein AYWB_480 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AYWB_480 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AYWB_481 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AYWB_481 PF01926 50S ribosome-binding GTPase AYWB_482 PF02224 Cytidylate kinase AYWB_483 PF00849 RNA pseudouridylate synthase AYWB_483 PF01479 S4 domain AYWB_484 PF01509 TruB family pseudouridylate synthase (N terminal domain) AYWB_485 PF00085 Thioredoxin AYWB_487 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_487 PF01434 Peptidase family M41 AYWB_487 PF17862 AAA+ lid domain AYWB_489 PF09334 tRNA synthetases class I (M) AYWB_489 PF01588 Putative tRNA binding domain AYWB_490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AYWB_491 PF09115 DNA polymerase III, delta subunit, C terminal AYWB_492 PF02223 Thymidylate kinase AYWB_493 PF01416 tRNA pseudouridine synthase AYWB_494 PF01196 Ribosomal protein L17 AYWB_495 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AYWB_495 PF01000 RNA polymerase Rpb3/RpoA insert domain AYWB_495 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AYWB_496 PF00411 Ribosomal protein S11 AYWB_497 PF00416 Ribosomal protein S13/S18 AYWB_498 PF00444 Ribosomal protein L36 AYWB_499 PF01176 Translation initiation factor 1A / IF-1 AYWB_500 PF00557 Metallopeptidase family M24 AYWB_501 PF05191 Adenylate kinase, active site lid AYWB_502 PF00344 SecY translocase AYWB_503 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AYWB_504 PF00327 Ribosomal protein L30p/L7e AYWB_505 PF00333 Ribosomal protein S5, N-terminal domain AYWB_505 PF03719 Ribosomal protein S5, C-terminal domain AYWB_506 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AYWB_507 PF00347 Ribosomal protein L6 AYWB_508 PF00410 Ribosomal protein S8 AYWB_509 PF00253 Ribosomal protein S14p/S29e AYWB_510 PF00281 Ribosomal protein L5 AYWB_510 PF00673 ribosomal L5P family C-terminus AYWB_511 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AYWB_512 PF00238 Ribosomal protein L14p/L23e AYWB_513 PF00366 Ribosomal protein S17 AYWB_514 PF00831 Ribosomal L29 protein AYWB_515 PF00252 Ribosomal protein L16p/L10e AYWB_516 PF07650 KH domain AYWB_516 PF00189 Ribosomal protein S3, C-terminal domain AYWB_517 PF00237 Ribosomal protein L22p/L17e AYWB_518 PF00203 Ribosomal protein S19 AYWB_519 PF00181 Ribosomal Proteins L2, RNA binding domain AYWB_519 PF03947 Ribosomal Proteins L2, C-terminal domain AYWB_520 PF00276 Ribosomal protein L23 AYWB_521 PF00573 Ribosomal protein L4/L1 family AYWB_522 PF00297 Ribosomal protein L3 AYWB_524 PF00338 Ribosomal protein S10p/S20e AYWB_525 PF01783 Ribosomal L32p protein family AYWB_527 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYWB_527 PF00005 ABC transporter AYWB_528 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYWB_528 PF00005 ABC transporter AYWB_529 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AYWB_530 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_532 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AYWB_533 PF00690 Cation transporter/ATPase, N-terminus AYWB_533 PF00689 Cation transporting ATPase, C-terminus AYWB_535 PF00133 tRNA synthetases class I (I, L, M and V) AYWB_535 PF08264 Anticodon-binding domain of tRNA AYWB_536 PF01926 50S ribosome-binding GTPase AYWB_536 PF06071 Protein of unknown function (DUF933) AYWB_537 PF03193 RsgA GTPase AYWB_538 PF00464 Serine hydroxymethyltransferase AYWB_540 PF00005 ABC transporter AYWB_541 PF00005 ABC transporter AYWB_545 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYWB_545 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AYWB_546 PF00162 Phosphoglycerate kinase AYWB_547 PF01116 Fructose-bisphosphate aldolase class-II AYWB_549 PF00121 Triosephosphate isomerase AYWB_551 PF01765 Ribosome recycling factor AYWB_552 PF00696 Amino acid kinase family AYWB_553 PF00889 Elongation factor TS AYWB_554 PF00318 Ribosomal protein S2 AYWB_555 PF00692 dUTPase AYWB_556 PF03167 Uracil DNA glycosylase superfamily AYWB_560 PF00871 Acetokinase family AYWB_561 PF03006 Haemolysin-III related AYWB_565 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AYWB_565 PF18074 Primosomal protein N C-terminal domain AYWB_565 PF17764 3′ DNA-binding domain (3′BD) AYWB_565 PF04851 Type III restriction enzyme, res subunit AYWB_565 PF00271 Helicase conserved C-terminal domain AYWB_566 PF01595 Cyclin M transmembrane N-terminal domain AYWB_566 PF03471 Transporter associated domain AYWB_566 PF00571 CBS domain AYWB_567 PF01195 Peptidyl-tRNA hydrolase AYWB_569 PF02033 Ribosome-binding factor A AYWB_570 PF11987 Translation-initiation factor 2 AYWB_570 PF04760 Translation initiation factor IF-2, N-terminal region AYWB_570 PF00009 Elongation factor Tu GTP binding domain AYWB_572 PF00575 S1 RNA binding domain AYWB_572 PF08529 NusA N-terminal domain AYWB_572 PF13184 NusA-like KH domain AYWB_574 PF01668 SmpB protein AYWB_575 PF00719 Inorganic pyrophosphatase AYWB_576 PF00588 SpoU rRNA Methylase family AYWB_576 PF08032 RNA 2'-O ribose methyltransferase substrate binding AYWB_577 PF02926 THUMP domain AYWB_577 PF02568 Thiamine biosynthesis protein (ThiI) AYWB_579 PF01406 tRNA synthetases class I (C) catalytic domain AYWB_580 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYWB_581 PF00380 Ribosomal protein S9/S16 AYWB_582 PF00572 Ribosomal protein L13 AYWB_585 PF00312 Ribosomal protein S15 AYWB_586 PF06153 Cyclic-di-AMP receptor AYWB_589 PF09383 NIL domain AYWB_589 PF00005 ABC transporter AYWB_590 PF01479 S4 domain AYWB_590 PF00849 RNA pseudouridylate synthase AYWB_591 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_591 PF17862 AAA+ lid domain AYWB_591 PF01434 Peptidase family M41 AYWB_592 PF01171 PP-loop family AYWB_592 PF11734 TilS substrate C-terminal domain AYWB_593 PF01336 OB-fold nucleic acid binding domain AYWB_593 PF00152 tRNA synthetases class II (D, K and N) AYWB_594 PF13393 Histidyl-tRNA synthetase AYWB_594 PF03129 Anticodon binding domain AYWB_596 PF02824 TGS domain AYWB_596 PF13291 ACT domain AYWB_596 PF04607 Region found in RelA / SpoT proteins AYWB_599 PF15438 Antigenic membrane protein of phytoplasma AYWB_600 PF00118 TCP-1/cpn60 chaperonin family AYWB_601 PF00166 Chaperonin 10 Kd subunit AYWB_603 PF00830 Ribosomal L28 family AYWB_604 PF01197 Ribosomal protein L31 AYWB_605 PF00265 Thymidine kinase AYWB_606 PF14437 MafB19-like deaminase AYWB_607 PF12627 Probable RNA and SrmB- binding site of polymerase A AYWB_607 PF01743 Poly A polymerase head domain AYWB_607 PF13735 tRNA nucleotidyltransferase domain 2 putative AYWB_608 PF01966 HD domain AYWB_616 PF10410 DnaB-helicase binding domain of primase AYWB_616 PF01807 CHC2 zinc finger AYWB_616 PF08275 DNA primase catalytic core, N-terminal domain AYWB_617 PF03796 DnaB-like helicase C terminal domain AYWB_617 PF00772 DnaB-like helicase N terminal domain AYWB_619 PF02687 FtsX-like permease family AYWB_619 PF00005 ABC transporter AYWB_619 PF12704 MacB-like periplasmic core domain AYWB_621 PF00950 ABC 3 transport family AYWB_622 PF00950 ABC 3 transport family AYWB_623 PF00005 ABC transporter AYWB_624 PF01297 Zinc-uptake complex component A periplasmic AYWB_626 PF01926 50S ribosome-binding GTPase AYWB_626 PF01018 GTP1/OBG AYWB_626 PF09269 Domain of unknown function (DUF1967) AYWB_627 PF01016 Ribosomal L27 protein AYWB_629 PF00829 Ribosomal prokaryotic L21 protein AYWB_632 PF02403 Seryl-tRNA synthetase N-terminal domain AYWB_632 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYWB_633 PF01649 Ribosomal protein S20 AYWB_634 PF00005 ABC transporter AYWB_635 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_646 PF06130 Phosphate propanoyltransferase AYWB_647 PF01966 HD domain AYWB_648 PF00398 Ribosomal RNA adenine dimethylase AYWB_649 PF04026 SpoVG AYWB_652 PF01795 MraW methylase family AYWB_653 PF01795 MraW methylase family AYWB_654 PF01192 RNA polymerase Rpb6 AYWB_655 PF00625 Guanylate kinase AYWB_656 PF08264 Anticodon-binding domain of tRNA AYWB_656 PF09334 tRNA synthetases class I (M) AYWB_656 PF13603 Leucyl-tRNA synthetase, Domain 2 AYWB_657 PF00550 Phosphopantetheine attachment site AYWB_658 PF05343 M42 glutamyl aminopeptidase AYWB_660 PF00453 Ribosomal protein L20 AYWB_660 PF07498 Rho termination factor, N-terminal domain AYWB_661 PF01632 Ribosomal protein L35 AYWB_662 PF00707 Translation initiation factor IF-3, C-terminal domain AYWB_662 PF05198 Translation initiation factor IF-3, N-terminal domain AYWB_663 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYWB_663 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYWB_663 PF03129 Anticodon binding domain AYWB_664 PF01368 DHH family AYWB_664 PF02272 DHHA1 domain AYWB_665 PF12631 MnmE helical domain AYWB_665 PF01926 50S ribosome-binding GTPase AYWB_665 PF10396 GTP-binding protein TrmE N-terminus AYWB_666 PF01368 DHH family AYWB_666 PF02272 DHHA1 domain AYWB_669 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_670 PF00005 ABC transporter AYWB_670 PF08402 TOBE domain AYWB_671 PF00152 tRNA synthetases class II (D, K and N) AYWB_671 PF01336 OB-fold nucleic acid binding domain AYWB_pI01 PF00799 Geminivirus Rep catalytic domain AYWB_pI05 PF00436 Single-strand binding protein family AYWB_pII01 PF00910 RNA helicase AYWB_pII01 PF01719 Plasmid replication protein AYWB_pII04 PF00436 Single-strand binding protein family AYWB_pIII01 PF00799 Geminivirus Rep catalytic domain AYWB_pIII07 PF00436 Single-strand binding protein family AYWB_pIV01 PF00910 RNA helicase AYWB_pIV01 PF01719 Plasmid replication protein AYWB_pIV05 PF00436 Single-strand binding protein family