locus-tag class description ATHSA_0001 PF11638 DnaA N-terminal domain ATHSA_0001 PF08299 Bacterial dnaA protein helix-turn-helix ATHSA_0001 PF00308 Bacterial dnaA protein ATHSA_0002 PF00664 ABC transporter transmembrane region ATHSA_0002 PF00005 ABC transporter ATHSA_0003 PF02390 Putative methyltransferase ATHSA_0004 PF00300 Histidine phosphatase superfamily (branch 1) ATHSA_0006 PF00722 Glycosyl hydrolases family 16 ATHSA_0007 PF00356 Bacterial regulatory proteins, lacI family ATHSA_0008 PF17863 AAA lid domain ATHSA_0008 PF07726 ATPase family associated with various cellular activities (AAA) ATHSA_0012 PF00005 ABC transporter ATHSA_0014 PF02687 FtsX-like permease family ATHSA_0014 PF00005 ABC transporter ATHSA_0014 PF12704 MacB-like periplasmic core domain ATHSA_0015 PF00005 ABC transporter ATHSA_0020 PF17209 Hfq protein ATHSA_0023 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATHSA_0024 PF03099 Biotin/lipoate A/B protein ligase family ATHSA_0025 PF02527 rRNA small subunit methyltransferase G ATHSA_0026 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0028 PF00270 DEAD/DEAH box helicase ATHSA_0028 PF00271 Helicase conserved C-terminal domain ATHSA_0031 PF01255 Putative undecaprenyl diphosphate synthase ATHSA_0032 PF01765 Ribosome recycling factor ATHSA_0033 PF00696 Amino acid kinase family ATHSA_0034 PF00889 Elongation factor TS ATHSA_0037 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATHSA_0038 PF02562 PhoH-like protein ATHSA_0038 PF13638 PIN domain ATHSA_0040 PF02350 UDP-N-acetylglucosamine 2-epimerase ATHSA_0042 PF01565 FAD binding domain ATHSA_0042 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ATHSA_0043 PF00633 Helix-hairpin-helix motif ATHSA_0043 PF00730 HhH-GPD superfamily base excision DNA repair protein ATHSA_0043 PF10576 Iron-sulfur binding domain of endonuclease III ATHSA_0046 PF00689 Cation transporting ATPase, C-terminus ATHSA_0046 PF00690 Cation transporter/ATPase, N-terminus ATHSA_0047 PF00923 Transaldolase/Fructose-6-phosphate aldolase ATHSA_0048 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATHSA_0048 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATHSA_0050 PF00485 Phosphoribulokinase / Uridine kinase family ATHSA_0052 PF00460 Flagella basal body rod protein ATHSA_0052 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATHSA_0053 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATHSA_0053 PF00460 Flagella basal body rod protein ATHSA_0055 PF02107 Flagellar L-ring protein ATHSA_0056 PF02119 Flagellar P-ring protein ATHSA_0059 PF01654 Cytochrome bd terminal oxidase subunit I ATHSA_0060 PF02322 Cytochrome bd terminal oxidase subunit II ATHSA_0063 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATHSA_0063 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATHSA_0066 PF03714 Bacterial pullanase-associated domain ATHSA_0066 PF00128 Alpha amylase, catalytic domain ATHSA_0066 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATHSA_0068 PF07497 Rho termination factor, RNA-binding domain ATHSA_0068 PF07498 Rho termination factor, N-terminal domain ATHSA_0068 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATHSA_0069 PF00923 Transaldolase/Fructose-6-phosphate aldolase ATHSA_0071 PF01196 Ribosomal protein L17 ATHSA_0072 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ATHSA_0072 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ATHSA_0072 PF01000 RNA polymerase Rpb3/RpoA insert domain ATHSA_0073 PF00163 Ribosomal protein S4/S9 N-terminal domain ATHSA_0073 PF01479 S4 domain ATHSA_0074 PF00411 Ribosomal protein S11 ATHSA_0075 PF00416 Ribosomal protein S13/S18 ATHSA_0076 PF00444 Ribosomal protein L36 ATHSA_0077 PF01176 Translation initiation factor 1A / IF-1 ATHSA_0078 PF00557 Metallopeptidase family M24 ATHSA_0079 PF05191 Adenylate kinase, active site lid ATHSA_0080 PF00344 SecY translocase ATHSA_0081 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ATHSA_0082 PF00327 Ribosomal protein L30p/L7e ATHSA_0083 PF03719 Ribosomal protein S5, C-terminal domain ATHSA_0083 PF00333 Ribosomal protein S5, N-terminal domain ATHSA_0084 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ATHSA_0085 PF00347 Ribosomal protein L6 ATHSA_0086 PF00410 Ribosomal protein S8 ATHSA_0087 PF00253 Ribosomal protein S14p/S29e ATHSA_0088 PF00281 Ribosomal protein L5 ATHSA_0088 PF00673 ribosomal L5P family C-terminus ATHSA_0089 PF00467 KOW motif ATHSA_0089 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ATHSA_0090 PF00238 Ribosomal protein L14p/L23e ATHSA_0091 PF00366 Ribosomal protein S17 ATHSA_0092 PF00831 Ribosomal L29 protein ATHSA_0093 PF00252 Ribosomal protein L16p/L10e ATHSA_0094 PF00189 Ribosomal protein S3, C-terminal domain ATHSA_0094 PF07650 KH domain ATHSA_0095 PF00237 Ribosomal protein L22p/L17e ATHSA_0096 PF00203 Ribosomal protein S19 ATHSA_0097 PF00181 Ribosomal Proteins L2, RNA binding domain ATHSA_0097 PF03947 Ribosomal Proteins L2, C-terminal domain ATHSA_0098 PF00276 Ribosomal protein L23 ATHSA_0099 PF00573 Ribosomal protein L4/L1 family ATHSA_0100 PF00297 Ribosomal protein L3 ATHSA_0101 PF00338 Ribosomal protein S10p/S20e ATHSA_0102 PF03144 Elongation factor Tu domain 2 ATHSA_0102 PF03143 Elongation factor Tu C-terminal domain ATHSA_0102 PF00009 Elongation factor Tu GTP binding domain ATHSA_0103 PF00679 Elongation factor G C-terminus ATHSA_0103 PF14492 Elongation Factor G, domain II ATHSA_0103 PF03144 Elongation factor Tu domain 2 ATHSA_0103 PF00009 Elongation factor Tu GTP binding domain ATHSA_0103 PF03764 Elongation factor G, domain IV ATHSA_0104 PF00177 Ribosomal protein S7p/S5e ATHSA_0105 PF00164 Ribosomal protein S12/S23 ATHSA_0106 PF00534 Glycosyl transferases group 1 ATHSA_0106 PF13439 Glycosyltransferase Family 4 ATHSA_0109 PF00072 Response regulator receiver domain ATHSA_0109 PF01339 CheB methylesterase ATHSA_0112 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATHSA_0113 PF01926 50S ribosome-binding GTPase ATHSA_0114 PF02190 ATP-dependent protease La (LON) substrate-binding domain ATHSA_0114 PF00004 ATPase family associated with various cellular activities (AAA) ATHSA_0114 PF05362 Lon protease (S16) C-terminal proteolytic domain ATHSA_0115 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATHSA_0116 PF12146 Serine aminopeptidase, S33 ATHSA_0116 PF13026 Protein of unknown function (DUF3887) ATHSA_0117 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATHSA_0117 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATHSA_0121 PF02608 ABC transporter substrate-binding protein PnrA-like ATHSA_0124 PF02562 PhoH-like protein ATHSA_0125 PF01966 HD domain ATHSA_0125 PF07698 7TM receptor with intracellular HD hydrolase ATHSA_0125 PF07697 7TM-HD extracellular ATHSA_0126 PF02130 Uncharacterized protein family UPF0054 ATHSA_0129 PF00348 Polyprenyl synthetase ATHSA_0130 PF02577 Bifunctional nuclease ATHSA_0131 PF01553 Acyltransferase ATHSA_0132 PF17284 Spermidine synthase tetramerisation domain ATHSA_0133 PF02675 S-adenosylmethionine decarboxylase ATHSA_0134 PF07883 Cupin domain ATHSA_0134 PF01381 Helix-turn-helix ATHSA_0137 PF01313 Bacterial export proteins, family 3 ATHSA_0138 PF01311 Bacterial export proteins, family 1 ATHSA_0139 PF01312 FlhB HrpN YscU SpaS Family ATHSA_0140 PF00771 FHIPEP family ATHSA_0141 PF00448 SRP54-type protein, GTPase domain ATHSA_0142 PF10609 NUBPL iron-transfer P-loop NTPase ATHSA_0143 PF07238 PilZ domain ATHSA_0143 PF12945 Flagellar protein YcgR ATHSA_0144 PF04509 CheC-like family ATHSA_0145 PF03975 CheD chemotactic sensory transduction ATHSA_0147 PF04545 Sigma-70, region 4 ATHSA_0147 PF04539 Sigma-70 region 3 ATHSA_0147 PF04542 Sigma-70 region 2 ATHSA_0149 PF03461 TRCF domain ATHSA_0149 PF00270 DEAD/DEAH box helicase ATHSA_0149 PF02559 CarD-like/TRCF domain ATHSA_0149 PF17757 UvrB interaction domain ATHSA_0149 PF00271 Helicase conserved C-terminal domain ATHSA_0151 PF00117 Glutamine amidotransferase class-I ATHSA_0151 PF06418 CTP synthase N-terminus ATHSA_0152 PF13344 Haloacid dehalogenase-like hydrolase ATHSA_0153 PF01565 FAD binding domain ATHSA_0153 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ATHSA_0154 PF01081 KDPG and KHG aldolase ATHSA_0155 PF00294 pfkB family carbohydrate kinase ATHSA_0156 PF03786 D-mannonate dehydratase (UxuA) ATHSA_0157 PF00106 short chain dehydrogenase ATHSA_0158 PF06452 Carbohydrate family 9 binding domain-like ATHSA_0158 PF02018 Carbohydrate binding domain ATHSA_0158 PF00331 Glycosyl hydrolase family 10 ATHSA_0158 PF00395 S-layer homology domain ATHSA_0162 PF13472 GDSL-like Lipase/Acylhydrolase family ATHSA_0163 PF03648 Glycosyl hydrolase family 67 N-terminus ATHSA_0163 PF07488 Glycosyl hydrolase family 67 middle domain ATHSA_0163 PF07477 Glycosyl hydrolase family 67 C-terminus ATHSA_0165 PF13802 Galactose mutarotase-like ATHSA_0165 PF01055 Glycosyl hydrolases family 31 ATHSA_0166 PF14310 Fibronectin type III-like domain ATHSA_0166 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATHSA_0166 PF00933 Glycosyl hydrolase family 3 N terminal domain ATHSA_0167 PF01261 Xylose isomerase-like TIM barrel ATHSA_0168 PF00480 ROK family ATHSA_0169 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATHSA_0169 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATHSA_0170 PF03030 Inorganic H+ pyrophosphatase ATHSA_0171 PF01475 Ferric uptake regulator family ATHSA_0172 PF00258 Flavodoxin ATHSA_0172 PF00753 Metallo-beta-lactamase superfamily ATHSA_0173 PF00210 Ferritin-like domain ATHSA_0174 PF01880 Desulfoferrodoxin ATHSA_0179 PF08281 Sigma-70, region 4 ATHSA_0179 PF04542 Sigma-70 region 2 ATHSA_0180 PF01649 Ribosomal protein S20 ATHSA_0181 PF02872 5'-nucleotidase, C-terminal domain ATHSA_0181 PF00149 Calcineurin-like phosphoesterase ATHSA_0182 PF01575 MaoC like domain ATHSA_0183 PF00579 tRNA synthetases class I (W and Y) ATHSA_0184 PF02616 Segregation and condensation protein ScpA ATHSA_0185 PF04079 Segregation and condensation complex subunit ScpB ATHSA_0186 PF01479 S4 domain ATHSA_0186 PF00849 RNA pseudouridylate synthase ATHSA_0191 PF00512 His Kinase A (phospho-acceptor) domain ATHSA_0191 PF00989 PAS fold ATHSA_0191 PF16736 Single Cache-like ATHSA_0191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATHSA_0192 PF08668 HDOD domain ATHSA_0193 PF01520 N-acetylmuramoyl-L-alanine amidase ATHSA_0194 PF00156 Phosphoribosyl transferase domain ATHSA_0195 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ATHSA_0196 PF01180 Dihydroorotate dehydrogenase ATHSA_0198 PF01979 Amidohydrolase family ATHSA_0199 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATHSA_0199 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATHSA_0201 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_0201 PF18267 Rubredoxin NAD+ reductase C-terminal domain ATHSA_0202 PF12804 MobA-like NTP transferase domain ATHSA_0203 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ATHSA_0203 PF12838 4Fe-4S dicluster domain ATHSA_0203 PF00384 Molybdopterin oxidoreductase ATHSA_0203 PF01568 Molydopterin dinucleotide binding domain ATHSA_0203 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATHSA_0204 PF00156 Phosphoribosyl transferase domain ATHSA_0205 PF04961 Formiminotransferase-cyclodeaminase ATHSA_0206 PF01791 DeoC/LacD family aldolase ATHSA_0215 PF00005 ABC transporter ATHSA_0216 PF00005 ABC transporter ATHSA_0216 PF12399 Branched-chain amino acid ATP-binding cassette transporter ATHSA_0217 PF11862 Domain of unknown function (DUF3382) ATHSA_0217 PF02653 Branched-chain amino acid transport system / permease component ATHSA_0218 PF02653 Branched-chain amino acid transport system / permease component ATHSA_0220 PF13091 PLD-like domain ATHSA_0222 PF02954 Bacterial regulatory protein, Fis family ATHSA_0222 PF00158 Sigma-54 interaction domain ATHSA_0222 PF06490 Flagellar regulatory protein FleQ ATHSA_0223 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0224 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_0224 PF00005 ABC transporter ATHSA_0225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_0226 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0226 PF12911 N-terminal TM domain of oligopeptide transport permease C ATHSA_0227 PF01979 Amidohydrolase family ATHSA_0228 PF01979 Amidohydrolase family ATHSA_0229 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_0230 PF13520 Amino acid permease ATHSA_0231 PF01979 Amidohydrolase family ATHSA_0231 PF13382 Adenine deaminase C-terminal domain ATHSA_0232 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_0233 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATHSA_0233 PF02743 Cache domain ATHSA_0233 PF00672 HAMP domain ATHSA_0235 PF01565 FAD binding domain ATHSA_0235 PF02913 FAD linked oxidases, C-terminal domain ATHSA_0236 PF01012 Electron transfer flavoprotein domain ATHSA_0236 PF00766 Electron transfer flavoprotein FAD-binding domain ATHSA_0237 PF01012 Electron transfer flavoprotein domain ATHSA_0238 PF00171 Aldehyde dehydrogenase family ATHSA_0239 PF09861 Lactate racemase N-terminal domain ATHSA_0240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATHSA_0240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATHSA_0241 PF01261 Xylose isomerase-like TIM barrel ATHSA_0244 PF13407 Periplasmic binding protein domain ATHSA_0245 PF02653 Branched-chain amino acid transport system / permease component ATHSA_0246 PF02653 Branched-chain amino acid transport system / permease component ATHSA_0247 PF00005 ABC transporter ATHSA_0249 PF00005 ABC transporter ATHSA_0252 PF00455 DeoR C terminal sensor domain ATHSA_0252 PF08220 DeoR-like helix-turn-helix domain ATHSA_0253 PF01791 DeoC/LacD family aldolase ATHSA_0255 PF03575 Peptidase family S51 ATHSA_0256 PF00905 Penicillin binding protein transpeptidase domain ATHSA_0256 PF03717 Penicillin-binding Protein dimerisation domain ATHSA_0256 PF03793 PASTA domain ATHSA_0257 PF05161 MOFRL family ATHSA_0257 PF13660 Domain of unknown function (DUF4147) ATHSA_0260 PF12794 Mechanosensitive ion channel inner membrane domain 1 ATHSA_0260 PF00924 Mechanosensitive ion channel ATHSA_0260 PF12795 Mechanosensitive ion channel porin domain ATHSA_0261 PF03572 Peptidase family S41 ATHSA_0261 PF14684 Tricorn protease C1 domain ATHSA_0261 PF07676 WD40-like Beta Propeller Repeat ATHSA_0261 PF14685 Tricorn protease PDZ domain ATHSA_0266 PF02272 DHHA1 domain ATHSA_0266 PF01411 tRNA synthetases class II (A) ATHSA_0266 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATHSA_0267 PF02021 Uncharacterised protein family UPF0102 ATHSA_0268 PF02686 Glu-tRNAGln amidotransferase C subunit ATHSA_0269 PF00563 EAL domain ATHSA_0269 PF00990 Diguanylate cyclase, GGDEF domain ATHSA_0269 PF03707 Bacterial signalling protein N terminal repeat ATHSA_0270 PF08450 SMP-30/Gluconolactonase/LRE-like region ATHSA_0272 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_0273 PF00356 Bacterial regulatory proteins, lacI family ATHSA_0274 PF00248 Aldo/keto reductase family ATHSA_0275 PF00248 Aldo/keto reductase family ATHSA_0276 PF00248 Aldo/keto reductase family ATHSA_0277 PF03824 High-affinity nickel-transport protein ATHSA_0278 PF00248 Aldo/keto reductase family ATHSA_0280 PF13288 DXP reductoisomerase C-terminal domain ATHSA_0280 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ATHSA_0280 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ATHSA_0281 PF17820 PDZ domain ATHSA_0281 PF02163 Peptidase family M50 ATHSA_0283 PF01799 [2Fe-2S] binding domain ATHSA_0283 PF00111 2Fe-2S iron-sulfur cluster binding domain ATHSA_0284 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ATHSA_0284 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ATHSA_0284 PF01799 [2Fe-2S] binding domain ATHSA_0285 PF01966 HD domain ATHSA_0285 PF00072 Response regulator receiver domain ATHSA_0287 PF01475 Ferric uptake regulator family ATHSA_0288 PF00155 Aminotransferase class I and II ATHSA_0291 PF01545 Cation efflux family ATHSA_0291 PF16916 Dimerisation domain of Zinc Transporter ATHSA_0292 PF01022 Bacterial regulatory protein, arsR family ATHSA_0293 PF01758 Sodium Bile acid symporter family ATHSA_0294 PF01906 Putative heavy-metal-binding ATHSA_0296 PF00005 ABC transporter ATHSA_0297 PF00392 Bacterial regulatory proteins, gntR family ATHSA_0298 PF02384 N-6 DNA Methylase ATHSA_0300 PF01420 Type I restriction modification DNA specificity domain ATHSA_0301 PF18766 SWI2/SNF2 ATPase ATHSA_0301 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ATHSA_0301 PF11867 Domain of unknown function (DUF3387) ATHSA_0306 PF02086 D12 class N6 adenine-specific DNA methyltransferase ATHSA_0309 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATHSA_0309 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATHSA_0310 PF00300 Histidine phosphatase superfamily (branch 1) ATHSA_0314 PF01380 SIS domain ATHSA_0315 PF00248 Aldo/keto reductase family ATHSA_0316 PF07690 Major Facilitator Superfamily ATHSA_0317 PF01184 GPR1/FUN34/yaaH family ATHSA_0318 PF13520 Amino acid permease ATHSA_0320 PF14748 Pyrroline-5-carboxylate reductase dimerisation ATHSA_0320 PF03807 NADP oxidoreductase coenzyme F420-dependent ATHSA_0321 PF00171 Aldehyde dehydrogenase family ATHSA_0322 PF00696 Amino acid kinase family ATHSA_0322 PF01472 PUA domain ATHSA_0324 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATHSA_0324 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATHSA_0325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATHSA_0325 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_0326 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATHSA_0326 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATHSA_0327 PF01712 Deoxynucleoside kinase ATHSA_0332 PF05746 DALR anticodon binding domain ATHSA_0332 PF02092 Glycyl-tRNA synthetase beta subunit ATHSA_0333 PF02091 Glycyl-tRNA synthetase alpha subunit ATHSA_0334 PF00133 tRNA synthetases class I (I, L, M and V) ATHSA_0334 PF08264 Anticodon-binding domain of tRNA ATHSA_0334 PF06827 Zinc finger found in FPG and IleRS ATHSA_0335 PF00072 Response regulator receiver domain ATHSA_0335 PF00486 Transcriptional regulatory protein, C terminal ATHSA_0336 PF13188 PAS domain ATHSA_0336 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATHSA_0336 PF00989 PAS fold ATHSA_0336 PF00512 His Kinase A (phospho-acceptor) domain ATHSA_0336 PF13426 PAS domain ATHSA_0338 PF01207 Dihydrouridine synthase (Dus) ATHSA_0339 PF04232 Stage V sporulation protein S (SpoVS) ATHSA_0341 PF07136 Protein of unknown function (DUF1385) ATHSA_0342 PF00083 Sugar (and other) transporter ATHSA_0344 PF01925 Sulfite exporter TauE/SafE ATHSA_0345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATHSA_0345 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_0348 PF04055 Radical SAM superfamily ATHSA_0352 PF01699 Sodium/calcium exchanger protein ATHSA_0354 PF03006 Haemolysin-III related ATHSA_0355 PF00356 Bacterial regulatory proteins, lacI family ATHSA_0356 PF00294 pfkB family carbohydrate kinase ATHSA_0359 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0360 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0361 PF01547 Bacterial extracellular solute-binding protein ATHSA_0362 PF00701 Dihydrodipicolinate synthetase family ATHSA_0368 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0369 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0370 PF13416 Bacterial extracellular solute-binding protein ATHSA_0375 PF01381 Helix-turn-helix ATHSA_0378 PF16875 Glycosyl hydrolase family 36 N-terminal domain ATHSA_0378 PF16874 Glycosyl hydrolase family 36 C-terminal domain ATHSA_0380 PF03275 UDP-galactopyranose mutase ATHSA_0382 PF00013 KH domain ATHSA_0382 PF12072 Domain of unknown function (DUF3552) ATHSA_0382 PF01966 HD domain ATHSA_0383 PF02631 RecX family ATHSA_0384 PF00154 recA bacterial DNA recombination protein ATHSA_0386 PF01066 CDP-alcohol phosphatidyltransferase ATHSA_0387 PF18693 TRAM domain ATHSA_0387 PF04055 Radical SAM superfamily ATHSA_0387 PF00919 Uncharacterized protein family UPF0004 ATHSA_0389 PF02481 DNA recombination-mediator protein A ATHSA_0393 PF01975 Survival protein SurE ATHSA_0397 PF05175 Methyltransferase small domain ATHSA_0398 PF08220 DeoR-like helix-turn-helix domain ATHSA_0398 PF00455 DeoR C terminal sensor domain ATHSA_0399 PF03437 BtpA family ATHSA_0400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATHSA_0400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATHSA_0402 PF00459 Inositol monophosphatase family ATHSA_0406 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0407 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0408 PF08402 TOBE domain ATHSA_0408 PF00005 ABC transporter ATHSA_0409 PF01641 SelR domain ATHSA_0409 PF01625 Peptide methionine sulfoxide reductase ATHSA_0413 PF03023 Lipid II flippase MurJ ATHSA_0414 PF03952 Enolase, N-terminal domain ATHSA_0414 PF00113 Enolase, C-terminal TIM barrel domain ATHSA_0415 PF01225 Mur ligase family, catalytic domain ATHSA_0415 PF08245 Mur ligase middle domain ATHSA_0415 PF02875 Mur ligase family, glutamate ligase domain ATHSA_0416 PF02875 Mur ligase family, glutamate ligase domain ATHSA_0416 PF08245 Mur ligase middle domain ATHSA_0416 PF01225 Mur ligase family, catalytic domain ATHSA_0417 PF00953 Glycosyl transferase family 4 ATHSA_0418 PF08245 Mur ligase middle domain ATHSA_0418 PF02875 Mur ligase family, glutamate ligase domain ATHSA_0419 PF01098 Cell cycle protein ATHSA_0420 PF04101 Glycosyltransferase family 28 C-terminal domain ATHSA_0420 PF03033 Glycosyltransferase family 28 N-terminal domain ATHSA_0421 PF00672 HAMP domain ATHSA_0421 PF02743 Cache domain ATHSA_0421 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATHSA_0422 PF09186 Domain of unknown function (DUF1949) ATHSA_0422 PF01205 Uncharacterized protein family UPF0029 ATHSA_0423 PF05636 HIGH Nucleotidyl Transferase ATHSA_0425 PF00708 Acylphosphatase ATHSA_0427 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ATHSA_0427 PF04509 CheC-like family ATHSA_0428 PF02154 Flagellar motor switch protein FliM ATHSA_0428 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ATHSA_0430 PF13677 Membrane MotB of proton-channel complex MotA/MotB ATHSA_0430 PF00691 OmpA family ATHSA_0431 PF01618 MotA/TolQ/ExbB proton channel family ATHSA_0433 PF00460 Flagella basal body rod protein ATHSA_0433 PF07559 Flagellar basal body protein FlaE ATHSA_0433 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATHSA_0434 PF13860 FlgD Ig-like domain ATHSA_0434 PF03963 Flagellar hook capping protein - N-terminal region ATHSA_0434 PF13861 FlgD Tudor-like domain ATHSA_0438 PF07690 Major Facilitator Superfamily ATHSA_0439 PF00753 Metallo-beta-lactamase superfamily ATHSA_0440 PF01047 MarR family ATHSA_0441 PF00156 Phosphoribosyl transferase domain ATHSA_0442 PF00342 Phosphoglucose isomerase ATHSA_0443 PF13237 4Fe-4S dicluster domain ATHSA_0443 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ATHSA_0443 PF10531 SLBB domain ATHSA_0443 PF13375 RnfC Barrel sandwich hybrid domain ATHSA_0444 PF03116 NQR2, RnfD, RnfE family ATHSA_0446 PF02508 Rnf-Nqr subunit, membrane protein ATHSA_0447 PF02508 Rnf-Nqr subunit, membrane protein ATHSA_0448 PF04060 Putative Fe-S cluster ATHSA_0448 PF00037 4Fe-4S binding domain ATHSA_0448 PF13187 4Fe-4S dicluster domain ATHSA_0449 PF02627 Carboxymuconolactone decarboxylase family ATHSA_0452 PF06071 Protein of unknown function (DUF933) ATHSA_0452 PF01926 50S ribosome-binding GTPase ATHSA_0453 PF01479 S4 domain ATHSA_0454 PF00294 pfkB family carbohydrate kinase ATHSA_0456 PF11849 Domain of unknown function (DUF3369) ATHSA_0458 PF02001 Protein of unknown function DUF134 ATHSA_0459 PF01588 Putative tRNA binding domain ATHSA_0459 PF09334 tRNA synthetases class I (M) ATHSA_0459 PF08264 Anticodon-binding domain of tRNA ATHSA_0460 PF00521 DNA gyrase/topoisomerase IV, subunit A ATHSA_0460 PF03989 DNA gyrase C-terminal domain, beta-propeller ATHSA_0461 PF01416 tRNA pseudouridine synthase ATHSA_0462 PF01728 FtsJ-like methyltransferase ATHSA_0462 PF01479 S4 domain ATHSA_0463 PF01043 SecA preprotein cross-linking domain ATHSA_0463 PF00271 Helicase conserved C-terminal domain ATHSA_0463 PF07516 SecA Wing and Scaffold domain ATHSA_0463 PF07517 SecA DEAD-like domain ATHSA_0464 PF03462 PCRF domain ATHSA_0464 PF00472 RF-1 domain ATHSA_0467 PF02608 ABC transporter substrate-binding protein PnrA-like ATHSA_0468 PF03009 Glycerophosphoryl diester phosphodiesterase family ATHSA_0473 PF01791 DeoC/LacD family aldolase ATHSA_0477 PF14489 QueF-like protein ATHSA_0478 PF01242 6-pyruvoyl tetrahydropterin synthase ATHSA_0483 PF17871 AAA lid domain ATHSA_0483 PF02861 Clp amino terminal domain, pathogenicity island component ATHSA_0483 PF10431 C-terminal, D2-small domain, of ClpB protein ATHSA_0483 PF00004 ATPase family associated with various cellular activities (AAA) ATHSA_0483 PF07724 AAA domain (Cdc48 subfamily) ATHSA_0484 PF00011 Hsp20/alpha crystallin family ATHSA_0485 PF00012 Hsp70 protein ATHSA_0488 PF00005 ABC transporter ATHSA_0489 PF00919 Uncharacterized protein family UPF0004 ATHSA_0489 PF04055 Radical SAM superfamily ATHSA_0490 PF01063 Amino-transferase class IV ATHSA_0491 PF08340 Domain of unknown function (DUF1732) ATHSA_0491 PF03755 YicC-like family, N-terminal region ATHSA_0492 PF04025 Domain of unknown function (DUF370) ATHSA_0493 PF00625 Guanylate kinase ATHSA_0494 PF01192 RNA polymerase Rpb6 ATHSA_0495 PF04127 DNA / pantothenate metabolism flavoprotein ATHSA_0495 PF02441 Flavoprotein ATHSA_0496 PF13192 Thioredoxin domain ATHSA_0496 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_0497 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_0501 PF13784 Fic/DOC family N-terminal ATHSA_0501 PF02661 Fic/DOC family ATHSA_0505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_0506 PF03600 Citrate transporter ATHSA_0507 PF00294 pfkB family carbohydrate kinase ATHSA_0508 PF02926 THUMP domain ATHSA_0508 PF01170 Putative RNA methylase family UPF0020 ATHSA_0509 PF06426 Serine acetyltransferase, N-terminal ATHSA_0509 PF00132 Bacterial transferase hexapeptide (six repeats) ATHSA_0510 PF00291 Pyridoxal-phosphate dependent enzyme ATHSA_0511 PF00117 Glutamine amidotransferase class-I ATHSA_0511 PF02540 NAD synthase ATHSA_0511 PF00958 GMP synthase C terminal domain ATHSA_0512 PF00462 Glutaredoxin ATHSA_0513 PF02219 Methylenetetrahydrofolate reductase ATHSA_0517 PF00814 Glycoprotease family ATHSA_0518 PF06689 ClpX C4-type zinc finger ATHSA_0518 PF10431 C-terminal, D2-small domain, of ClpB protein ATHSA_0518 PF07724 AAA domain (Cdc48 subfamily) ATHSA_0519 PF00574 Clp protease ATHSA_0520 PF05697 Bacterial trigger factor protein (TF) ATHSA_0520 PF05698 Bacterial trigger factor protein (TF) C-terminus ATHSA_0521 PF10431 C-terminal, D2-small domain, of ClpB protein ATHSA_0521 PF07724 AAA domain (Cdc48 subfamily) ATHSA_0521 PF00004 ATPase family associated with various cellular activities (AAA) ATHSA_0522 PF00227 Proteasome subunit ATHSA_0523 PF07478 D-ala D-ala ligase C-terminus ATHSA_0523 PF01820 D-ala D-ala ligase N-terminus ATHSA_0524 PF01467 Cytidylyltransferase-like ATHSA_0525 PF00149 Calcineurin-like phosphoesterase ATHSA_0526 PF00166 Chaperonin 10 Kd subunit ATHSA_0527 PF00118 TCP-1/cpn60 chaperonin family ATHSA_0528 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATHSA_0528 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATHSA_0530 PF00317 Ribonucleotide reductase, all-alpha domain ATHSA_0530 PF02867 Ribonucleotide reductase, barrel domain ATHSA_0530 PF03477 ATP cone domain ATHSA_0531 PF00398 Ribosomal RNA adenine dimethylase ATHSA_0541 PF05221 S-adenosyl-L-homocysteine hydrolase ATHSA_0541 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ATHSA_0542 PF00005 ABC transporter ATHSA_0545 PF00849 RNA pseudouridylate synthase ATHSA_0545 PF01479 S4 domain ATHSA_0546 PF01569 PAP2 superfamily ATHSA_0547 PF01628 HrcA protein C terminal domain ATHSA_0548 PF01025 GrpE ATHSA_0549 PF01556 DnaJ C terminal domain ATHSA_0549 PF00226 DnaJ domain ATHSA_0549 PF00684 DnaJ central domain ATHSA_0551 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ATHSA_0551 PF00037 4Fe-4S binding domain ATHSA_0551 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATHSA_0554 PF00005 ABC transporter ATHSA_0554 PF17912 MalK OB fold domain ATHSA_0554 PF03459 TOBE domain ATHSA_0557 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATHSA_0558 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATHSA_0558 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATHSA_0558 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATHSA_0559 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATHSA_0559 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATHSA_0560 PF01966 HD domain ATHSA_0561 PF00005 ABC transporter ATHSA_0563 PF00005 ABC transporter ATHSA_0564 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0565 PF00497 Bacterial extracellular solute-binding proteins, family 3 ATHSA_0567 PF01171 PP-loop family ATHSA_0567 PF11734 TilS substrate C-terminal domain ATHSA_0568 PF01434 Peptidase family M41 ATHSA_0568 PF17862 AAA+ lid domain ATHSA_0568 PF00004 ATPase family associated with various cellular activities (AAA) ATHSA_0570 PF00486 Transcriptional regulatory protein, C terminal ATHSA_0570 PF00072 Response regulator receiver domain ATHSA_0571 PF16736 Single Cache-like ATHSA_0571 PF00989 PAS fold ATHSA_0571 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATHSA_0571 PF00512 His Kinase A (phospho-acceptor) domain ATHSA_0572 PF17827 PrmC N-terminal domain ATHSA_0572 PF05175 Methyltransferase small domain ATHSA_0573 PF01883 Iron-sulfur cluster assembly protein ATHSA_0575 PF03819 MazG nucleotide pyrophosphohydrolase domain ATHSA_0576 PF01865 Protein of unknown function DUF47 ATHSA_0577 PF01384 Phosphate transporter family ATHSA_0579 PF05188 MutS domain II ATHSA_0579 PF05192 MutS domain III ATHSA_0579 PF00488 MutS domain V ATHSA_0579 PF01624 MutS domain I ATHSA_0579 PF05190 MutS family domain IV ATHSA_0580 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ATHSA_0581 PF01979 Amidohydrolase family ATHSA_0582 PF00291 Pyridoxal-phosphate dependent enzyme ATHSA_0583 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ATHSA_0583 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ATHSA_0584 PF13382 Adenine deaminase C-terminal domain ATHSA_0584 PF01979 Amidohydrolase family ATHSA_0586 PF02645 Uncharacterised protein, DegV family COG1307 ATHSA_0587 PF01741 Large-conductance mechanosensitive channel, MscL ATHSA_0588 PF13416 Bacterial extracellular solute-binding protein ATHSA_0589 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0590 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0591 PF01026 TatD related DNase ATHSA_0592 PF08245 Mur ligase middle domain ATHSA_0592 PF02875 Mur ligase family, glutamate ligase domain ATHSA_0592 PF01225 Mur ligase family, catalytic domain ATHSA_0593 PF01078 Magnesium chelatase, subunit ChlI ATHSA_0593 PF13335 Magnesium chelatase, subunit ChlI C-terminal ATHSA_0594 PF01078 Magnesium chelatase, subunit ChlI ATHSA_0594 PF13335 Magnesium chelatase, subunit ChlI C-terminal ATHSA_0596 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase ATHSA_0600 PF00471 Ribosomal protein L33 ATHSA_0602 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ATHSA_0603 PF02357 Transcription termination factor nusG ATHSA_0603 PF18298 NusG additional domain ATHSA_0603 PF00467 KOW motif ATHSA_0604 PF03946 Ribosomal protein L11, N-terminal domain ATHSA_0604 PF00298 Ribosomal protein L11, RNA binding domain ATHSA_0605 PF00687 Ribosomal protein L1p/L10e family ATHSA_0606 PF00466 Ribosomal protein L10 ATHSA_0607 PF16320 Ribosomal protein L7/L12 dimerisation domain ATHSA_0607 PF00542 Ribosomal protein L7/L12 C-terminal domain ATHSA_0608 PF04560 RNA polymerase Rpb2, domain 7 ATHSA_0608 PF00562 RNA polymerase Rpb2, domain 6 ATHSA_0608 PF10385 RNA polymerase beta subunit external 1 domain ATHSA_0608 PF04565 RNA polymerase Rpb2, domain 3 ATHSA_0608 PF04561 RNA polymerase Rpb2, domain 2 ATHSA_0608 PF04563 RNA polymerase beta subunit ATHSA_0609 PF04983 RNA polymerase Rpb1, domain 3 ATHSA_0609 PF00623 RNA polymerase Rpb1, domain 2 ATHSA_0609 PF04997 RNA polymerase Rpb1, domain 1 ATHSA_0609 PF04998 RNA polymerase Rpb1, domain 5 ATHSA_0609 PF05000 RNA polymerase Rpb1, domain 4 ATHSA_0616 PF00072 Response regulator receiver domain ATHSA_0616 PF00990 Diguanylate cyclase, GGDEF domain ATHSA_0618 PF00596 Class II Aldolase and Adducin N-terminal domain ATHSA_0619 PF01979 Amidohydrolase family ATHSA_0621 PF04055 Radical SAM superfamily ATHSA_0621 PF16199 Radical_SAM C-terminal domain ATHSA_0622 PF01048 Phosphorylase superfamily ATHSA_0623 PF01048 Phosphorylase superfamily ATHSA_0624 PF02885 Glycosyl transferase family, helical bundle domain ATHSA_0624 PF00591 Glycosyl transferase family, a/b domain ATHSA_0624 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ATHSA_0626 PF00679 Elongation factor G C-terminus ATHSA_0626 PF00009 Elongation factor Tu GTP binding domain ATHSA_0626 PF03764 Elongation factor G, domain IV ATHSA_0626 PF14492 Elongation Factor G, domain II ATHSA_0628 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ATHSA_0628 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ATHSA_0629 PF00216 Bacterial DNA-binding protein ATHSA_0632 PF00578 AhpC/TSA family ATHSA_0632 PF10417 C-terminal domain of 1-Cys peroxiredoxin ATHSA_0633 PF01566 Natural resistance-associated macrophage protein ATHSA_0634 PF00460 Flagella basal body rod protein ATHSA_0635 PF00460 Flagella basal body rod protein ATHSA_0635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATHSA_0636 PF02049 Flagellar hook-basal body complex protein FliE ATHSA_0637 PF01119 DNA mismatch repair protein, C-terminal domain ATHSA_0637 PF08676 MutL C terminal dimerisation domain ATHSA_0638 PF00588 SpoU rRNA Methylase family ATHSA_0638 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATHSA_0645 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system ATHSA_0651 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system ATHSA_0656 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATHSA_0656 PF00989 PAS fold ATHSA_0656 PF00512 His Kinase A (phospho-acceptor) domain ATHSA_0657 PF00158 Sigma-54 interaction domain ATHSA_0657 PF02954 Bacterial regulatory protein, Fis family ATHSA_0657 PF00072 Response regulator receiver domain ATHSA_0658 PF02511 Thymidylate synthase complementing protein ATHSA_0659 PF00035 Double-stranded RNA binding motif ATHSA_0659 PF14622 Ribonuclease-III-like ATHSA_0661 PF06470 SMC proteins Flexible Hinge Domain ATHSA_0661 PF02463 RecF/RecN/SMC N terminal domain ATHSA_0662 PF03144 Elongation factor Tu domain 2 ATHSA_0662 PF00009 Elongation factor Tu GTP binding domain ATHSA_0662 PF06421 GTP-binding protein LepA C-terminus ATHSA_0662 PF00679 Elongation factor G C-terminus ATHSA_0664 PF04493 Endonuclease V ATHSA_0670 PF01479 S4 domain ATHSA_0670 PF00579 tRNA synthetases class I (W and Y) ATHSA_0672 PF07690 Major Facilitator Superfamily ATHSA_0673 PF01808 AICARFT/IMPCHase bienzyme ATHSA_0673 PF02142 MGS-like domain ATHSA_0674 PF01584 CheW-like domain ATHSA_0675 PF01726 LexA DNA binding domain ATHSA_0675 PF00717 Peptidase S24-like ATHSA_0677 PF10609 NUBPL iron-transfer P-loop NTPase ATHSA_0679 PF00814 Glycoprotease family ATHSA_0681 PF06750 Bacterial Peptidase A24 N-terminal domain ATHSA_0681 PF01478 Type IV leader peptidase family ATHSA_0683 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATHSA_0684 PF00580 UvrD/REP helicase N-terminal domain ATHSA_0684 PF13361 UvrD-like helicase C-terminal domain ATHSA_0685 PF00990 Diguanylate cyclase, GGDEF domain ATHSA_0685 PF00072 Response regulator receiver domain ATHSA_0687 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0688 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0689 PF13520 Amino acid permease ATHSA_0693 PF08220 DeoR-like helix-turn-helix domain ATHSA_0693 PF00455 DeoR C terminal sensor domain ATHSA_0697 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0698 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0699 PF02585 GlcNAc-PI de-N-acetylase ATHSA_0701 PF00703 Glycosyl hydrolases family 2 ATHSA_0701 PF02837 Glycosyl hydrolases family 2, sugar binding domain ATHSA_0701 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ATHSA_0702 PF11975 Family 4 glycosyl hydrolase C-terminal domain ATHSA_0702 PF02056 Family 4 glycosyl hydrolase ATHSA_0707 PF02780 Transketolase, C-terminal domain ATHSA_0707 PF02779 Transketolase, pyrimidine binding domain ATHSA_0707 PF00456 Transketolase, thiamine diphosphate binding domain ATHSA_0708 PF02080 TrkA-C domain ATHSA_0708 PF02254 TrkA-N domain ATHSA_0709 PF02254 TrkA-N domain ATHSA_0709 PF02080 TrkA-C domain ATHSA_0711 PF02386 Cation transport protein ATHSA_0715 PF08447 PAS fold ATHSA_0715 PF00989 PAS fold ATHSA_0715 PF00512 His Kinase A (phospho-acceptor) domain ATHSA_0715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATHSA_0716 PF00158 Sigma-54 interaction domain ATHSA_0716 PF00072 Response regulator receiver domain ATHSA_0716 PF02954 Bacterial regulatory protein, Fis family ATHSA_0718 PF08345 Flagellar M-ring protein C-terminal ATHSA_0718 PF01514 Secretory protein of YscJ/FliF family ATHSA_0719 PF14842 FliG N-terminal domain ATHSA_0719 PF01706 FliG C-terminal domain ATHSA_0719 PF14841 FliG middle domain ATHSA_0724 PF02127 Aminopeptidase I zinc metalloprotease (M18) ATHSA_0725 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ATHSA_0725 PF17768 RecJ OB domain ATHSA_0725 PF01368 DHH family ATHSA_0725 PF02272 DHHA1 domain ATHSA_0726 PF03652 Holliday junction resolvase ATHSA_0729 PF00119 ATP synthase A chain ATHSA_0730 PF00137 ATP synthase subunit C ATHSA_0731 PF00430 ATP synthase B/B' CF(0) ATHSA_0732 PF00213 ATP synthase delta (OSCP) subunit ATHSA_0733 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATHSA_0733 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATHSA_0733 PF00306 ATP synthase alpha/beta chain, C terminal domain ATHSA_0734 PF00231 ATP synthase ATHSA_0735 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATHSA_0735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATHSA_0736 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ATHSA_0736 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATHSA_0737 PF00365 Phosphofructokinase ATHSA_0738 PF01871 AMMECR1 ATHSA_0740 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ATHSA_0742 PF01894 Uncharacterised protein family UPF0047 ATHSA_0744 PF01926 50S ribosome-binding GTPase ATHSA_0744 PF01018 GTP1/OBG ATHSA_0744 PF09269 Domain of unknown function (DUF1967) ATHSA_0745 PF01467 Cytidylyltransferase-like ATHSA_0746 PF04951 D-aminopeptidase ATHSA_0748 PF00309 Sigma-54 factor, Activator interacting domain (AID) ATHSA_0748 PF04963 Sigma-54 factor, core binding domain ATHSA_0748 PF04552 Sigma-54, DNA binding domain ATHSA_0751 PF03065 Glycosyl hydrolase family 57 ATHSA_0751 PF09210 Domain of unknown function (DUF1957) ATHSA_0752 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ATHSA_0752 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ATHSA_0752 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATHSA_0752 PF10371 Domain of unknown function ATHSA_0752 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ATHSA_0756 PF00334 Nucleoside diphosphate kinase ATHSA_0761 PF01592 NifU-like N terminal domain ATHSA_0762 PF00266 Aminotransferase class-V ATHSA_0763 PF01458 Uncharacterized protein family (UPF0051) ATHSA_0764 PF01458 Uncharacterized protein family (UPF0051) ATHSA_0765 PF00005 ABC transporter ATHSA_0768 PF00005 ABC transporter ATHSA_0768 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_0769 PF00005 ABC transporter ATHSA_0769 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_0770 PF12911 N-terminal TM domain of oligopeptide transport permease C ATHSA_0770 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0772 PF02632 BioY family ATHSA_0773 PF12848 ABC transporter ATHSA_0773 PF00005 ABC transporter ATHSA_0773 PF16326 ABC transporter C-terminal domain ATHSA_0774 PF00221 Aromatic amino acid lyase ATHSA_0775 PF00575 S1 RNA binding domain ATHSA_0775 PF08206 Ribonuclease B OB domain ATHSA_0775 PF17876 Cold shock domain ATHSA_0775 PF00773 RNB domain ATHSA_0776 PF02583 Metal-sensitive transcriptional repressor ATHSA_0777 PF17820 PDZ domain ATHSA_0777 PF01471 Putative peptidoglycan binding domain ATHSA_0777 PF03572 Peptidase family S41 ATHSA_0779 PF02881 SRP54-type protein, helical bundle domain ATHSA_0779 PF00448 SRP54-type protein, GTPase domain ATHSA_0779 PF02978 Signal peptide binding domain ATHSA_0780 PF00886 Ribosomal protein S16 ATHSA_0782 PF05239 PRC-barrel domain ATHSA_0782 PF01782 RimM N-terminal domain ATHSA_0783 PF01746 tRNA (Guanine-1)-methyltransferase ATHSA_0784 PF09936 SAM-dependent RNA methyltransferase ATHSA_0785 PF01245 Ribosomal protein L19 ATHSA_0786 PF10502 Signal peptidase, peptidase S26 ATHSA_0787 PF01926 50S ribosome-binding GTPase ATHSA_0788 PF00550 Phosphopantetheine attachment site ATHSA_0789 PF03775 Septum formation inhibitor MinC, C-terminal domain ATHSA_0790 PF01761 3-dehydroquinate synthase ATHSA_0798 PF04452 RNA methyltransferase ATHSA_0799 PF02403 Seryl-tRNA synthetase N-terminal domain ATHSA_0799 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATHSA_0801 PF00121 Triosephosphate isomerase ATHSA_0802 PF00121 Triosephosphate isomerase ATHSA_0802 PF00162 Phosphoglycerate kinase ATHSA_0803 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ATHSA_0803 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATHSA_0804 PF02575 YbaB/EbfC DNA-binding family ATHSA_0805 PF12169 DNA polymerase III subunits gamma and tau domain III ATHSA_0807 PF00472 RF-1 domain ATHSA_0807 PF03462 PCRF domain ATHSA_0810 PF04445 Putative SAM-dependent methyltransferase ATHSA_0812 PF17209 Hfq protein ATHSA_0813 PF01926 50S ribosome-binding GTPase ATHSA_0813 PF13167 GTP-binding GTPase N-terminal ATHSA_0813 PF16360 GTP-binding GTPase Middle Region ATHSA_0815 PF00438 S-adenosylmethionine synthetase, N-terminal domain ATHSA_0815 PF02772 S-adenosylmethionine synthetase, central domain ATHSA_0815 PF02773 S-adenosylmethionine synthetase, C-terminal domain ATHSA_0816 PF13932 GidA associated domain ATHSA_0816 PF01134 Glucose inhibited division protein A ATHSA_0817 PF01368 DHH family ATHSA_0817 PF02833 DHHA2 domain ATHSA_0817 PF07085 DRTGG domain ATHSA_0817 PF00571 CBS domain ATHSA_0825 PF00072 Response regulator receiver domain ATHSA_0826 PF07228 Stage II sporulation protein E (SpoIIE) ATHSA_0826 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain ATHSA_0830 PF02541 Ppx/GppA phosphatase family ATHSA_0831 PF17785 PUA-like domain ATHSA_0831 PF10672 S-adenosylmethionine-dependent methyltransferase ATHSA_0833 PF02561 Flagellar protein FliS ATHSA_0835 PF00072 Response regulator receiver domain ATHSA_0835 PF00486 Transcriptional regulatory protein, C terminal ATHSA_0836 PF00512 His Kinase A (phospho-acceptor) domain ATHSA_0836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATHSA_0836 PF00072 Response regulator receiver domain ATHSA_0836 PF09308 LuxQ, periplasmic ATHSA_0837 PF06971 Putative DNA-binding protein N-terminus ATHSA_0837 PF02629 CoA binding domain ATHSA_0838 PF04011 LemA family ATHSA_0839 PF01116 Fructose-bisphosphate aldolase class-II ATHSA_0840 PF00871 Acetokinase family ATHSA_0841 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATHSA_0841 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATHSA_0842 PF08279 HTH domain ATHSA_0842 PF02829 3H domain ATHSA_0843 PF07690 Major Facilitator Superfamily ATHSA_0844 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ATHSA_0844 PF00037 4Fe-4S binding domain ATHSA_0844 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATHSA_0847 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATHSA_0847 PF00512 His Kinase A (phospho-acceptor) domain ATHSA_0847 PF00989 PAS fold ATHSA_0850 PF00005 ABC transporter ATHSA_0850 PF00571 CBS domain ATHSA_0852 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_0853 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0855 PF00005 ABC transporter ATHSA_0855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_0856 PF00005 ABC transporter ATHSA_0856 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_0859 PF09094 Domain of unknown function (DUF1925) ATHSA_0859 PF09095 Domain of unknown function (DUF1926) ATHSA_0859 PF03065 Glycosyl hydrolase family 57 ATHSA_0860 PF00575 S1 RNA binding domain ATHSA_0860 PF10150 Ribonuclease E/G family ATHSA_0861 PF00813 FliP family ATHSA_0863 PF00072 Response regulator receiver domain ATHSA_0864 PF01584 CheW-like domain ATHSA_0865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATHSA_0865 PF07194 P2 response regulator binding domain ATHSA_0865 PF01584 CheW-like domain ATHSA_0865 PF01627 Hpt domain ATHSA_0865 PF02895 Signal transducing histidine kinase, homodimeric domain ATHSA_0871 PF01112 Asparaginase ATHSA_0873 PF00459 Inositol monophosphatase family ATHSA_0874 PF01588 Putative tRNA binding domain ATHSA_0874 PF03483 B3/4 domain ATHSA_0874 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ATHSA_0874 PF03484 tRNA synthetase B5 domain ATHSA_0874 PF03147 Ferredoxin-fold anticodon binding domain ATHSA_0875 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ATHSA_0875 PF01409 tRNA synthetases class II core domain (F) ATHSA_0876 PF02683 Cytochrome C biogenesis protein transmembrane region ATHSA_0879 PF00226 DnaJ domain ATHSA_0879 PF00684 DnaJ central domain ATHSA_0879 PF01556 DnaJ C terminal domain ATHSA_0881 PF05670 NFACT protein RNA binding domain ATHSA_0882 PF00128 Alpha amylase, catalytic domain ATHSA_0883 PF00795 Carbon-nitrogen hydrolase ATHSA_0884 PF01131 DNA topoisomerase ATHSA_0884 PF01751 Toprim domain ATHSA_0885 PF01966 HD domain ATHSA_0886 PF00842 Alanine racemase, C-terminal domain ATHSA_0886 PF01168 Alanine racemase, N-terminal domain ATHSA_0887 PF00830 Ribosomal L28 family ATHSA_0891 PF02654 Cobalamin-5-phosphate synthase ATHSA_0892 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ATHSA_0893 PF00155 Aminotransferase class I and II ATHSA_0894 PF03186 CobD/Cbib protein ATHSA_0895 PF07685 CobB/CobQ-like glutamine amidotransferase domain ATHSA_0905 PF00263 Bacterial type II and III secretion system protein ATHSA_0905 PF11741 AMIN domain ATHSA_0905 PF03958 Bacterial type II/III secretion system short domain ATHSA_0905 PF07660 Secretin and TonB N terminus short domain ATHSA_0910 PF00005 ABC transporter ATHSA_0915 PF00456 Transketolase, thiamine diphosphate binding domain ATHSA_0915 PF02780 Transketolase, C-terminal domain ATHSA_0915 PF02779 Transketolase, pyrimidine binding domain ATHSA_0916 PF02677 Epoxyqueuosine reductase QueH ATHSA_0918 PF13581 Histidine kinase-like ATPase domain ATHSA_0919 PF01134 Glucose inhibited division protein A ATHSA_0920 PF01966 HD domain ATHSA_0920 PF00672 HAMP domain ATHSA_0921 PF00533 BRCA1 C Terminus (BRCT) domain ATHSA_0921 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ATHSA_0921 PF12826 Helix-hairpin-helix motif ATHSA_0921 PF01653 NAD-dependent DNA ligase adenylation domain ATHSA_0921 PF03120 NAD-dependent DNA ligase OB-fold domain ATHSA_0922 PF02566 OsmC-like protein ATHSA_0925 PF00291 Pyridoxal-phosphate dependent enzyme ATHSA_0926 PF17392 Urocanase C-terminal domain ATHSA_0926 PF01175 Urocanase Rossmann-like domain ATHSA_0926 PF17391 Urocanase N-terminal domain ATHSA_0928 PF13537 Glutamine amidotransferase domain ATHSA_0928 PF00733 Asparagine synthase ATHSA_0930 PF02463 RecF/RecN/SMC N terminal domain ATHSA_0933 PF00313 'Cold-shock' DNA-binding domain ATHSA_0935 PF00356 Bacterial regulatory proteins, lacI family ATHSA_0936 PF01547 Bacterial extracellular solute-binding protein ATHSA_0937 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0938 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0939 PF07690 Major Facilitator Superfamily ATHSA_0940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_0941 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_0943 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_0943 PF00005 ABC transporter ATHSA_0944 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_0944 PF00005 ABC transporter ATHSA_0947 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATHSA_0948 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ATHSA_0948 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ATHSA_0948 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ATHSA_0949 PF00005 ABC transporter ATHSA_0950 PF00905 Penicillin binding protein transpeptidase domain ATHSA_0950 PF03717 Penicillin-binding Protein dimerisation domain ATHSA_0952 PF01795 MraW methylase family ATHSA_0953 PF07244 Surface antigen variable number repeat ATHSA_0953 PF01103 Surface antigen ATHSA_0954 PF03485 Arginyl tRNA synthetase N terminal domain ATHSA_0954 PF05746 DALR anticodon binding domain ATHSA_0954 PF00750 tRNA synthetases class I (R) ATHSA_0955 PF00005 ABC transporter ATHSA_0955 PF17760 UvrA interaction domain ATHSA_0955 PF17755 UvrA DNA-binding domain ATHSA_0956 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATHSA_0956 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATHSA_0956 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATHSA_0956 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATHSA_0957 PF01336 OB-fold nucleic acid binding domain ATHSA_0957 PF00152 tRNA synthetases class II (D, K and N) ATHSA_0958 PF01272 Transcription elongation factor, GreA/GreB, C-term ATHSA_0958 PF03449 Transcription elongation factor, N-terminal ATHSA_0959 PF13684 Dihydroxyacetone kinase family ATHSA_0959 PF02734 DAK2 domain ATHSA_0961 PF02780 Transketolase, C-terminal domain ATHSA_0961 PF02779 Transketolase, pyrimidine binding domain ATHSA_0961 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ATHSA_0962 PF02609 Exonuclease VII small subunit ATHSA_0963 PF02601 Exonuclease VII, large subunit ATHSA_0963 PF13742 OB-fold nucleic acid binding domain ATHSA_0964 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ATHSA_0964 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ATHSA_0965 PF01268 Formate--tetrahydrofolate ligase ATHSA_0966 PF03780 Asp23 family, cell envelope-related function ATHSA_0967 PF09285 Elongation factor P, C-terminal ATHSA_0967 PF01132 Elongation factor P (EF-P) OB domain ATHSA_0967 PF08207 Elongation factor P (EF-P) KOW-like domain ATHSA_0968 PF01321 Creatinase/Prolidase N-terminal domain ATHSA_0968 PF00557 Metallopeptidase family M24 ATHSA_0970 PF02896 PEP-utilising enzyme, TIM barrel domain ATHSA_0970 PF00391 PEP-utilising enzyme, mobile domain ATHSA_0970 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ATHSA_0971 PF00453 Ribosomal protein L20 ATHSA_0972 PF01632 Ribosomal protein L35 ATHSA_0973 PF00707 Translation initiation factor IF-3, C-terminal domain ATHSA_0973 PF05198 Translation initiation factor IF-3, N-terminal domain ATHSA_0977 PF00128 Alpha amylase, catalytic domain ATHSA_0977 PF02903 Alpha amylase, N-terminal ig-like domain ATHSA_0978 PF01202 Shikimate kinase ATHSA_0978 PF01761 3-dehydroquinate synthase ATHSA_0979 PF01264 Chorismate synthase ATHSA_0980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATHSA_0981 PF00793 DAHP synthetase I family ATHSA_0981 PF18152 DAHP synthase ferredoxin-like domain ATHSA_0982 PF00117 Glutamine amidotransferase class-I ATHSA_0982 PF02885 Glycosyl transferase family, helical bundle domain ATHSA_0982 PF00591 Glycosyl transferase family, a/b domain ATHSA_0983 PF00425 chorismate binding enzyme ATHSA_0983 PF04715 Anthranilate synthase component I, N terminal region ATHSA_0984 PF00290 Tryptophan synthase alpha chain ATHSA_0985 PF00291 Pyridoxal-phosphate dependent enzyme ATHSA_0986 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ATHSA_0987 PF00218 Indole-3-glycerol phosphate synthase ATHSA_0988 PF02885 Glycosyl transferase family, helical bundle domain ATHSA_0988 PF00591 Glycosyl transferase family, a/b domain ATHSA_0989 PF02463 RecF/RecN/SMC N terminal domain ATHSA_0990 PF13382 Adenine deaminase C-terminal domain ATHSA_0990 PF01979 Amidohydrolase family ATHSA_0991 PF00578 AhpC/TSA family ATHSA_0992 PF01966 HD domain ATHSA_0992 PF00072 Response regulator receiver domain ATHSA_0993 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit ATHSA_0993 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase ATHSA_0993 PF02310 B12 binding domain ATHSA_0994 PF16552 D-ornithine 4,5-aminomutase alpha-subunit ATHSA_0995 PF00291 Pyridoxal-phosphate dependent enzyme ATHSA_0997 PF01113 Dihydrodipicolinate reductase, N-terminus ATHSA_0999 PF00437 Type II/IV secretion system protein ATHSA_1000 PF12327 FtsZ family, C-terminal domain ATHSA_1000 PF00091 Tubulin/FtsZ family, GTPase domain ATHSA_1002 PF02223 Thymidylate kinase ATHSA_1003 PF00772 DnaB-like helicase N terminal domain ATHSA_1003 PF03796 DnaB-like helicase C terminal domain ATHSA_1005 PF01895 PhoU domain ATHSA_1006 PF00437 Type II/IV secretion system protein ATHSA_1007 PF00005 ABC transporter ATHSA_1008 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1009 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1010 PF12849 PBP superfamily domain ATHSA_1011 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATHSA_1011 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATHSA_1013 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ATHSA_1013 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ATHSA_1015 PF00108 Thiolase, N-terminal domain ATHSA_1015 PF02803 Thiolase, C-terminal domain ATHSA_1016 PF13458 Periplasmic binding protein ATHSA_1017 PF12399 Branched-chain amino acid ATP-binding cassette transporter ATHSA_1017 PF00005 ABC transporter ATHSA_1018 PF00005 ABC transporter ATHSA_1020 PF02653 Branched-chain amino acid transport system / permease component ATHSA_1020 PF11862 Domain of unknown function (DUF3382) ATHSA_1022 PF12697 Alpha/beta hydrolase family ATHSA_1024 PF07690 Major Facilitator Superfamily ATHSA_1025 PF00149 Calcineurin-like phosphoesterase ATHSA_1025 PF02872 5'-nucleotidase, C-terminal domain ATHSA_1026 PF03063 Prismane/CO dehydrogenase family ATHSA_1027 PF13545 Crp-like helix-turn-helix domain ATHSA_1027 PF00027 Cyclic nucleotide-binding domain ATHSA_1028 PF14306 PUA-like domain ATHSA_1028 PF01747 ATP-sulfurylase ATHSA_1031 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ATHSA_1031 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATHSA_1033 PF00672 HAMP domain ATHSA_1033 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATHSA_1033 PF12729 Four helix bundle sensory module for signal transduction ATHSA_1035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATHSA_1035 PF18269 T3SS EscN ATPase C-terminal domain ATHSA_1035 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATHSA_1036 PF02915 Rubrerythrin ATHSA_1037 PF13520 Amino acid permease ATHSA_1038 PF10298 WhiA N-terminal LAGLIDADG-like domain ATHSA_1038 PF14527 WhiA LAGLIDADG-like domain ATHSA_1038 PF02650 WhiA C-terminal HTH domain ATHSA_1039 PF01933 Uncharacterised protein family UPF0052 ATHSA_1040 PF03668 P-loop ATPase protein family ATHSA_1044 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ATHSA_1044 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ATHSA_1045 PF08323 Starch synthase catalytic domain ATHSA_1045 PF00534 Glycosyl transferases group 1 ATHSA_1047 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1048 PF01547 Bacterial extracellular solute-binding protein ATHSA_1049 PF13302 Acetyltransferase (GNAT) domain ATHSA_1050 PF01042 Endoribonuclease L-PSP ATHSA_1053 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_1054 PF13416 Bacterial extracellular solute-binding protein ATHSA_1055 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1056 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1058 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ATHSA_1058 PF10091 Putative glucoamylase ATHSA_1058 PF06165 Glycosyltransferase family 36 ATHSA_1062 PF00696 Amino acid kinase family ATHSA_1062 PF01842 ACT domain ATHSA_1062 PF13840 ACT domain ATHSA_1063 PF02774 Semialdehyde dehydrogenase, dimerisation domain ATHSA_1063 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATHSA_1064 PF08544 GHMP kinases C terminal ATHSA_1064 PF00288 GHMP kinases N terminal domain ATHSA_1065 PF00291 Pyridoxal-phosphate dependent enzyme ATHSA_1066 PF00291 Pyridoxal-phosphate dependent enzyme ATHSA_1067 PF00497 Bacterial extracellular solute-binding proteins, family 3 ATHSA_1068 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1069 PF00005 ABC transporter ATHSA_1071 PF00132 Bacterial transferase hexapeptide (six repeats) ATHSA_1073 PF00005 ABC transporter ATHSA_1074 PF00005 ABC transporter ATHSA_1075 PF05175 Methyltransferase small domain ATHSA_1077 PF02272 DHHA1 domain ATHSA_1077 PF01368 DHH family ATHSA_1078 PF01668 SmpB protein ATHSA_1079 PF01168 Alanine racemase, N-terminal domain ATHSA_1080 PF00989 PAS fold ATHSA_1080 PF00512 His Kinase A (phospho-acceptor) domain ATHSA_1080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATHSA_1080 PF16736 Single Cache-like ATHSA_1081 PF00486 Transcriptional regulatory protein, C terminal ATHSA_1081 PF00072 Response regulator receiver domain ATHSA_1082 PF01895 PhoU domain ATHSA_1083 PF00672 HAMP domain ATHSA_1083 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATHSA_1083 PF02743 Cache domain ATHSA_1084 PF02580 D-Tyr-tRNA(Tyr) deacylase ATHSA_1085 PF04607 Region found in RelA / SpoT proteins ATHSA_1085 PF02824 TGS domain ATHSA_1085 PF13291 ACT domain ATHSA_1089 PF01784 NIF3 (NGG1p interacting factor 3) ATHSA_1090 PF08013 Tagatose 6 phosphate kinase ATHSA_1094 PF01547 Bacterial extracellular solute-binding protein ATHSA_1095 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1096 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1097 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATHSA_1097 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATHSA_1098 PF00455 DeoR C terminal sensor domain ATHSA_1098 PF08220 DeoR-like helix-turn-helix domain ATHSA_1099 PF01791 DeoC/LacD family aldolase ATHSA_1101 PF01380 SIS domain ATHSA_1103 PF00005 ABC transporter ATHSA_1105 PF01545 Cation efflux family ATHSA_1105 PF16916 Dimerisation domain of Zinc Transporter ATHSA_1111 PF02272 DHHA1 domain ATHSA_1111 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATHSA_1111 PF01411 tRNA synthetases class II (A) ATHSA_1117 PF00364 Biotin-requiring enzyme ATHSA_1119 PF01039 Carboxyl transferase domain ATHSA_1122 PF03309 Type III pantothenate kinase ATHSA_1123 PF01174 SNO glutamine amidotransferase family ATHSA_1124 PF01680 SOR/SNZ family ATHSA_1125 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ATHSA_1125 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ATHSA_1126 PF00857 Isochorismatase family ATHSA_1128 PF00005 ABC transporter ATHSA_1130 PF02502 Ribose/Galactose Isomerase ATHSA_1132 PF00636 Ribonuclease III domain ATHSA_1133 PF01195 Peptidyl-tRNA hydrolase ATHSA_1134 PF01386 Ribosomal L25p family ATHSA_1134 PF14693 Ribosomal protein TL5, C-terminal domain ATHSA_1135 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ATHSA_1135 PF14572 Phosphoribosyl synthetase-associated domain ATHSA_1136 PF12804 MobA-like NTP transferase domain ATHSA_1136 PF14602 Hexapeptide repeat of succinyl-transferase ATHSA_1136 PF00132 Bacterial transferase hexapeptide (six repeats) ATHSA_1137 PF07499 RuvA, C-terminal domain ATHSA_1137 PF01330 RuvA N terminal domain ATHSA_1138 PF02875 Mur ligase family, glutamate ligase domain ATHSA_1138 PF08245 Mur ligase middle domain ATHSA_1139 PF08264 Anticodon-binding domain of tRNA ATHSA_1139 PF10458 Valyl tRNA synthetase tRNA binding arm ATHSA_1139 PF00133 tRNA synthetases class I (I, L, M and V) ATHSA_1141 PF01212 Beta-eliminating lyase ATHSA_1142 PF00313 'Cold-shock' DNA-binding domain ATHSA_1143 PF01475 Ferric uptake regulator family ATHSA_1146 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1147 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1151 PF00575 S1 RNA binding domain ATHSA_1152 PF00288 GHMP kinases N terminal domain ATHSA_1153 PF02347 Glycine cleavage system P-protein ATHSA_1154 PF02347 Glycine cleavage system P-protein ATHSA_1155 PF01597 Glycine cleavage H-protein ATHSA_1156 PF08669 Glycine cleavage T-protein C-terminal barrel domain ATHSA_1156 PF01571 Aminomethyltransferase folate-binding domain ATHSA_1157 PF00155 Aminotransferase class I and II ATHSA_1158 PF08240 Alcohol dehydrogenase GroES-like domain ATHSA_1158 PF00107 Zinc-binding dehydrogenase ATHSA_1164 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATHSA_1164 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ATHSA_1165 PF02142 MGS-like domain ATHSA_1166 PF13735 tRNA nucleotidyltransferase domain 2 putative ATHSA_1166 PF01743 Poly A polymerase head domain ATHSA_1166 PF12627 Probable RNA and SrmB- binding site of polymerase A ATHSA_1169 PF00005 ABC transporter ATHSA_1170 PF02649 Type I GTP cyclohydrolase folE2 ATHSA_1172 PF02424 ApbE family ATHSA_1174 PF02424 ApbE family ATHSA_1176 PF02545 Maf-like protein ATHSA_1178 PF07664 Ferrous iron transport protein B C terminus ATHSA_1178 PF07670 Nucleoside recognition ATHSA_1178 PF02421 Ferrous iron transport protein B ATHSA_1178 PF17910 FeoB cytosolic helical domain ATHSA_1178 PF04023 FeoA domain ATHSA_1183 PF02310 B12 binding domain ATHSA_1183 PF13282 Domain of unknown function (DUF4070) ATHSA_1183 PF04055 Radical SAM superfamily ATHSA_1184 PF00082 Subtilase family ATHSA_1185 PF12146 Serine aminopeptidase, S33 ATHSA_1186 PF01300 Telomere recombination ATHSA_1189 PF04232 Stage V sporulation protein S (SpoVS) ATHSA_1193 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_1193 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATHSA_1194 PF04324 BFD-like [2Fe-2S] binding domain ATHSA_1194 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_1195 PF04309 Glycerol-3-phosphate responsive antiterminator ATHSA_1197 PF01875 Memo-like protein ATHSA_1198 PF00263 Bacterial type II and III secretion system protein ATHSA_1198 PF07660 Secretin and TonB N terminus short domain ATHSA_1198 PF03958 Bacterial type II/III secretion system short domain ATHSA_1198 PF11741 AMIN domain ATHSA_1204 PF00482 Type II secretion system (T2SS), protein F ATHSA_1211 PF03167 Uracil DNA glycosylase superfamily ATHSA_1212 PF03129 Anticodon binding domain ATHSA_1212 PF13393 Histidyl-tRNA synthetase ATHSA_1213 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit ATHSA_1214 PF02310 B12 binding domain ATHSA_1214 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase ATHSA_1216 PF00990 Diguanylate cyclase, GGDEF domain ATHSA_1218 PF00248 Aldo/keto reductase family ATHSA_1219 PF01040 UbiA prenyltransferase family ATHSA_1220 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_1221 PF03358 NADPH-dependent FMN reductase ATHSA_1225 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ATHSA_1225 PF14602 Hexapeptide repeat of succinyl-transferase ATHSA_1225 PF00132 Bacterial transferase hexapeptide (six repeats) ATHSA_1228 PF00550 Phosphopantetheine attachment site ATHSA_1233 PF13439 Glycosyltransferase Family 4 ATHSA_1233 PF00534 Glycosyl transferases group 1 ATHSA_1235 PF00534 Glycosyl transferases group 1 ATHSA_1235 PF13439 Glycosyltransferase Family 4 ATHSA_1236 PF16363 GDP-mannose 4,6 dehydratase ATHSA_1240 PF00483 Nucleotidyl transferase ATHSA_1240 PF01050 Mannose-6-phosphate isomerase ATHSA_1244 PF04055 Radical SAM superfamily ATHSA_1244 PF12544 Lysine-2,3-aminomutase ATHSA_1246 PF02768 DNA polymerase III beta subunit, C-terminal domain ATHSA_1246 PF02767 DNA polymerase III beta subunit, central domain ATHSA_1246 PF00712 DNA polymerase III beta subunit, N-terminal domain ATHSA_1247 PF02542 YgbB family ATHSA_1248 PF02361 Cobalt transport protein ATHSA_1249 PF04029 2-phosphosulpholactate phosphatase ATHSA_1250 PF01464 Transglycosylase SLT domain ATHSA_1251 PF01966 HD domain ATHSA_1254 PF01618 MotA/TolQ/ExbB proton channel family ATHSA_1255 PF01979 Amidohydrolase family ATHSA_1256 PF01813 ATP synthase subunit D ATHSA_1257 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATHSA_1257 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATHSA_1258 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATHSA_1258 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATHSA_1258 PF16886 ATPsynthase alpha/beta subunit N-term extension ATHSA_1262 PF00132 Bacterial transferase hexapeptide (six repeats) ATHSA_1262 PF00483 Nucleotidyl transferase ATHSA_1263 PF00483 Nucleotidyl transferase ATHSA_1264 PF00464 Serine hydroxymethyltransferase ATHSA_1265 PF02954 Bacterial regulatory protein, Fis family ATHSA_1265 PF00989 PAS fold ATHSA_1265 PF00158 Sigma-54 interaction domain ATHSA_1266 PF01513 ATP-NAD kinase ATHSA_1268 PF05496 Holliday junction DNA helicase RuvB P-loop domain ATHSA_1268 PF05491 RuvB C-terminal winged helix domain ATHSA_1268 PF17864 RuvB AAA lid domain ATHSA_1269 PF01336 OB-fold nucleic acid binding domain ATHSA_1269 PF00152 tRNA synthetases class II (D, K and N) ATHSA_1273 PF04055 Radical SAM superfamily ATHSA_1282 PF00909 Ammonium Transporter Family ATHSA_1287 PF00589 Phage integrase family ATHSA_1287 PF02899 Phage integrase, N-terminal SAM-like domain ATHSA_1288 PF00378 Enoyl-CoA hydratase/isomerase ATHSA_1293 PF07690 Major Facilitator Superfamily ATHSA_1297 PF00440 Bacterial regulatory proteins, tetR family ATHSA_1297 PF16295 Tetracyclin repressor-like, C-terminal domain ATHSA_1298 PF00248 Aldo/keto reductase family ATHSA_1300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATHSA_1303 PF00005 ABC transporter ATHSA_1305 PF07676 WD40-like Beta Propeller Repeat ATHSA_1305 PF00326 Prolyl oligopeptidase family ATHSA_1306 PF00468 Ribosomal protein L34 ATHSA_1307 PF00825 Ribonuclease P ATHSA_1308 PF01809 Putative membrane protein insertion efficiency factor ATHSA_1309 PF02096 60Kd inner membrane protein ATHSA_1310 PF01424 R3H domain ATHSA_1310 PF14804 Jag N-terminus ATHSA_1311 PF07837 Formiminotransferase domain, N-terminal subdomain ATHSA_1311 PF02971 Formiminotransferase domain ATHSA_1312 PF01979 Amidohydrolase family ATHSA_1313 PF02590 Predicted SPOUT methyltransferase ATHSA_1314 PF03471 Transporter associated domain ATHSA_1314 PF00571 CBS domain ATHSA_1315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATHSA_1316 PF02903 Alpha amylase, N-terminal ig-like domain ATHSA_1316 PF00128 Alpha amylase, catalytic domain ATHSA_1316 PF16657 Maltogenic Amylase, C-terminal domain ATHSA_1320 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ATHSA_1321 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ATHSA_1321 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ATHSA_1322 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ATHSA_1322 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATHSA_1323 PF00186 Dihydrofolate reductase ATHSA_1325 PF00155 Aminotransferase class I and II ATHSA_1326 PF00953 Glycosyl transferase family 4 ATHSA_1327 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATHSA_1327 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATHSA_1327 PF02824 TGS domain ATHSA_1327 PF03129 Anticodon binding domain ATHSA_1328 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ATHSA_1328 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ATHSA_1328 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ATHSA_1330 PF02261 Aspartate decarboxylase ATHSA_1331 PF01546 Peptidase family M20/M25/M40 ATHSA_1334 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1335 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1337 PF00480 ROK family ATHSA_1338 PF02146 Sir2 family ATHSA_1341 PF00563 EAL domain ATHSA_1341 PF00498 FHA domain ATHSA_1341 PF00990 Diguanylate cyclase, GGDEF domain ATHSA_1342 PF00465 Iron-containing alcohol dehydrogenase ATHSA_1344 PF03009 Glycerophosphoryl diester phosphodiesterase family ATHSA_1347 PF13580 SIS domain ATHSA_1348 PF00480 ROK family ATHSA_1350 PF01053 Cys/Met metabolism PLP-dependent enzyme ATHSA_1351 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1352 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1353 PF01547 Bacterial extracellular solute-binding protein ATHSA_1354 PF00480 ROK family ATHSA_1358 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_1358 PF00005 ABC transporter ATHSA_1359 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_1359 PF00005 ABC transporter ATHSA_1361 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1362 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_1363 PF01261 Xylose isomerase-like TIM barrel ATHSA_1364 PF13802 Galactose mutarotase-like ATHSA_1364 PF17137 Domain of unknown function (DUF5110) ATHSA_1364 PF16338 Domain of unknown function (DUF4968) ATHSA_1364 PF01055 Glycosyl hydrolases family 31 ATHSA_1366 PF04545 Sigma-70, region 4 ATHSA_1366 PF00140 Sigma-70 factor, region 1.2 ATHSA_1366 PF04542 Sigma-70 region 2 ATHSA_1366 PF03979 Sigma-70 factor, region 1.1 ATHSA_1366 PF04539 Sigma-70 region 3 ATHSA_1368 PF02660 Glycerol-3-phosphate acyltransferase ATHSA_1369 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ATHSA_1369 PF01926 50S ribosome-binding GTPase ATHSA_1370 PF00575 S1 RNA binding domain ATHSA_1371 PF02401 LytB protein ATHSA_1372 PF02224 Cytidylate kinase ATHSA_1373 PF01740 STAS domain ATHSA_1374 PF01336 OB-fold nucleic acid binding domain ATHSA_1374 PF02938 GAD domain ATHSA_1374 PF00152 tRNA synthetases class II (D, K and N) ATHSA_1376 PF09828 Chromate resistance exported protein ATHSA_1377 PF00403 Heavy-metal-associated domain ATHSA_1379 PF02583 Metal-sensitive transcriptional repressor ATHSA_1386 PF00033 Cytochrome b/b6/petB ATHSA_1389 PF01209 ubiE/COQ5 methyltransferase family ATHSA_1390 PF03814 Potassium-transporting ATPase A subunit ATHSA_1392 PF02669 K+-transporting ATPase, c chain ATHSA_1393 PF00512 His Kinase A (phospho-acceptor) domain ATHSA_1393 PF02702 Osmosensitive K+ channel His kinase sensor domain ATHSA_1393 PF13492 GAF domain ATHSA_1393 PF13493 Domain of unknown function (DUF4118) ATHSA_1393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATHSA_1394 PF07690 Major Facilitator Superfamily ATHSA_1396 PF00881 Nitroreductase family ATHSA_1398 PF01327 Polypeptide deformylase ATHSA_1399 PF00551 Formyl transferase ATHSA_1399 PF02911 Formyl transferase, C-terminal domain ATHSA_1401 PF05958 tRNA (Uracil-5-)-methyltransferase ATHSA_1402 PF00578 AhpC/TSA family ATHSA_1404 PF01008 Initiation factor 2 subunit family ATHSA_1405 PF03885 Protein of unknown function (DUF327) ATHSA_1406 PF12169 DNA polymerase III subunits gamma and tau domain III ATHSA_1406 PF12170 DNA polymerase III tau subunit V interacting with alpha ATHSA_1407 PF04468 PSP1 C-terminal conserved region ATHSA_1408 PF01702 Queuine tRNA-ribosyltransferase ATHSA_1409 PF10609 NUBPL iron-transfer P-loop NTPase ATHSA_1410 PF04073 Aminoacyl-tRNA editing domain ATHSA_1410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATHSA_1410 PF03129 Anticodon binding domain ATHSA_1411 PF00448 SRP54-type protein, GTPase domain ATHSA_1411 PF02881 SRP54-type protein, helical bundle domain ATHSA_1416 PF02620 Large ribosomal RNA subunit accumulation protein YceD ATHSA_1417 PF01783 Ribosomal L32p protein family ATHSA_1418 PF02504 Fatty acid synthesis protein ATHSA_1419 PF01380 SIS domain ATHSA_1421 PF09334 tRNA synthetases class I (M) ATHSA_1421 PF08264 Anticodon-binding domain of tRNA ATHSA_1421 PF00133 tRNA synthetases class I (I, L, M and V) ATHSA_1421 PF13603 Leucyl-tRNA synthetase, Domain 2 ATHSA_1422 PF02629 CoA binding domain ATHSA_1422 PF06971 Putative DNA-binding protein N-terminus ATHSA_1424 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATHSA_1424 PF03466 LysR substrate binding domain ATHSA_1425 PF00005 ABC transporter ATHSA_1425 PF17912 MalK OB fold domain ATHSA_1425 PF03459 TOBE domain ATHSA_1426 PF00128 Alpha amylase, catalytic domain ATHSA_1427 PF01520 N-acetylmuramoyl-L-alanine amidase ATHSA_1427 PF08239 Bacterial SH3 domain ATHSA_1428 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATHSA_1428 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATHSA_1428 PF02824 TGS domain ATHSA_1428 PF03129 Anticodon binding domain ATHSA_1429 PF03061 Thioesterase superfamily ATHSA_1430 PF05853 beta-keto acid cleavage enzyme ATHSA_1431 PF02699 Preprotein translocase subunit ATHSA_1432 PF02355 Protein export membrane protein ATHSA_1432 PF07549 SecD/SecF GG Motif ATHSA_1433 PF02355 Protein export membrane protein ATHSA_1433 PF07549 SecD/SecF GG Motif ATHSA_1435 PF01121 Dephospho-CoA kinase ATHSA_1436 PF00709 Adenylosuccinate synthetase ATHSA_1437 PF00206 Lyase ATHSA_1437 PF10397 Adenylosuccinate lyase C-terminus ATHSA_1438 PF02540 NAD synthase ATHSA_1438 PF00958 GMP synthase C terminal domain ATHSA_1438 PF00117 Glutamine amidotransferase class-I ATHSA_1440 PF01425 Amidase ATHSA_1441 PF02934 GatB/GatE catalytic domain ATHSA_1441 PF02637 GatB domain ATHSA_1442 PF00809 Pterin binding enzyme ATHSA_1443 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ATHSA_1443 PF02152 Dihydroneopterin aldolase ATHSA_1444 PF02540 NAD synthase ATHSA_1444 PF00795 Carbon-nitrogen hydrolase ATHSA_1452 PF00140 Sigma-70 factor, region 1.2 ATHSA_1452 PF04542 Sigma-70 region 2 ATHSA_1452 PF04539 Sigma-70 region 3 ATHSA_1452 PF04545 Sigma-70, region 4 ATHSA_1453 PF00872 Transposase, Mutator family ATHSA_1454 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ATHSA_1454 PF01348 Type II intron maturase ATHSA_1456 PF12950 TaqI-like C-terminal specificity domain ATHSA_1456 PF07669 Eco57I restriction-modification methylase ATHSA_1457 PF00176 SNF2 family N-terminal domain ATHSA_1457 PF00271 Helicase conserved C-terminal domain ATHSA_1465 PF02033 Ribosome-binding factor A ATHSA_1466 PF01509 TruB family pseudouridylate synthase (N terminal domain) ATHSA_1466 PF16198 tRNA pseudouridylate synthase B C-terminal domain ATHSA_1466 PF01472 PUA domain ATHSA_1467 PF01687 Riboflavin kinase ATHSA_1467 PF06574 FAD synthetase ATHSA_1468 PF01554 MatE ATHSA_1469 PF00312 Ribosomal protein S15 ATHSA_1470 PF00013 KH domain ATHSA_1470 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ATHSA_1470 PF01138 3' exoribonuclease family, domain 1 ATHSA_1470 PF00575 S1 RNA binding domain ATHSA_1470 PF03725 3' exoribonuclease family, domain 2 ATHSA_1471 PF05193 Peptidase M16 inactive domain ATHSA_1471 PF00675 Insulinase (Peptidase family M16) ATHSA_1472 PF00072 Response regulator receiver domain ATHSA_1473 PF00465 Iron-containing alcohol dehydrogenase ATHSA_1476 PF07690 Major Facilitator Superfamily ATHSA_1477 PF07687 Peptidase dimerisation domain ATHSA_1477 PF01546 Peptidase family M20/M25/M40 ATHSA_1481 PF01293 Phosphoenolpyruvate carboxykinase ATHSA_1486 PF00005 ABC transporter ATHSA_1488 PF00005 ABC transporter ATHSA_1489 PF01061 ABC-2 type transporter ATHSA_1491 PF01923 Cobalamin adenosyltransferase ATHSA_1492 PF00294 pfkB family carbohydrate kinase ATHSA_1493 PF00534 Glycosyl transferases group 1 ATHSA_1493 PF00862 Sucrose synthase ATHSA_1495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATHSA_1495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATHSA_1495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATHSA_1495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATHSA_1497 PF02681 Divergent PAP2 family ATHSA_1498 PF12344 Ultra-violet resistance protein B ATHSA_1498 PF02151 UvrB/uvrC motif ATHSA_1498 PF04851 Type III restriction enzyme, res subunit ATHSA_1498 PF17757 UvrB interaction domain ATHSA_1498 PF00271 Helicase conserved C-terminal domain ATHSA_1499 PF01351 Ribonuclease HII ATHSA_1500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATHSA_1500 PF07196 Flagellin hook IN motif ATHSA_1502 PF02623 FliW protein ATHSA_1503 PF02599 Global regulator protein family ATHSA_1504 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_1505 PF01497 Periplasmic binding protein ATHSA_1506 PF01032 FecCD transport family ATHSA_1507 PF00005 ABC transporter ATHSA_1509 PF12704 MacB-like periplasmic core domain ATHSA_1509 PF02687 FtsX-like permease family ATHSA_1509 PF00005 ABC transporter ATHSA_1510 PF08459 UvrC Helix-hairpin-helix N-terminal ATHSA_1510 PF01541 GIY-YIG catalytic domain ATHSA_1511 PF00265 Thymidine kinase ATHSA_1513 PF03951 Glutamine synthetase, beta-Grasp domain ATHSA_1513 PF00120 Glutamine synthetase, catalytic domain ATHSA_1514 PF00171 Aldehyde dehydrogenase family ATHSA_1515 PF01266 FAD dependent oxidoreductase ATHSA_1516 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_1516 PF17806 Sarcosine oxidase A3 domain ATHSA_1518 PF03853 YjeF-related protein N-terminus ATHSA_1518 PF01256 Carbohydrate kinase ATHSA_1522 PF00589 Phage integrase family ATHSA_1523 PF00155 Aminotransferase class I and II ATHSA_1528 PF00106 short chain dehydrogenase ATHSA_1529 PF01926 50S ribosome-binding GTPase ATHSA_1529 PF12631 MnmE helical domain ATHSA_1529 PF10396 GTP-binding protein TrmE N-terminus ATHSA_1530 PF00206 Lyase ATHSA_1530 PF10415 Fumarase C C-terminus ATHSA_1531 PF01842 ACT domain ATHSA_1531 PF03315 Serine dehydratase beta chain ATHSA_1532 PF03313 Serine dehydratase alpha chain ATHSA_1533 PF01678 Diaminopimelate epimerase ATHSA_1534 PF00701 Dihydrodipicolinate synthetase family ATHSA_1535 PF01113 Dihydrodipicolinate reductase, N-terminus ATHSA_1535 PF05173 Dihydrodipicolinate reductase, C-terminus ATHSA_1536 PF00132 Bacterial transferase hexapeptide (six repeats) ATHSA_1536 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal ATHSA_1536 PF14602 Hexapeptide repeat of succinyl-transferase ATHSA_1537 PF00696 Amino acid kinase family ATHSA_1537 PF01842 ACT domain ATHSA_1537 PF13840 ACT domain ATHSA_1538 PF00202 Aminotransferase class-III ATHSA_1539 PF01546 Peptidase family M20/M25/M40 ATHSA_1539 PF07687 Peptidase dimerisation domain ATHSA_1541 PF00486 Transcriptional regulatory protein, C terminal ATHSA_1541 PF00072 Response regulator receiver domain ATHSA_1542 PF08521 Two-component sensor kinase N-terminal ATHSA_1542 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATHSA_1542 PF00512 His Kinase A (phospho-acceptor) domain ATHSA_1543 PF07690 Major Facilitator Superfamily ATHSA_1548 PF00005 ABC transporter ATHSA_1556 PF01470 Pyroglutamyl peptidase ATHSA_1557 PF00355 Rieske [2Fe-2S] domain ATHSA_1558 PF02525 Flavodoxin-like fold ATHSA_1561 PF00535 Glycosyl transferase family 2 ATHSA_1565 PF01593 Flavin containing amine oxidoreductase ATHSA_1567 PF03714 Bacterial pullanase-associated domain ATHSA_1567 PF00128 Alpha amylase, catalytic domain ATHSA_1567 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATHSA_1568 PF09827 CRISPR associated protein Cas2 ATHSA_1569 PF01867 CRISPR associated protein Cas1 ATHSA_1570 PF01867 CRISPR associated protein Cas1 ATHSA_1572 PF18395 Cas3 C-terminal domain ATHSA_1572 PF00270 DEAD/DEAH box helicase ATHSA_1572 PF18019 HD domain ATHSA_1576 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATHSA_1593 PF03787 RAMP superfamily ATHSA_1601 PF02954 Bacterial regulatory protein, Fis family ATHSA_1601 PF00158 Sigma-54 interaction domain ATHSA_1601 PF01590 GAF domain ATHSA_1603 PF00623 RNA polymerase Rpb1, domain 2 ATHSA_1603 PF04998 RNA polymerase Rpb1, domain 5 ATHSA_1603 PF05000 RNA polymerase Rpb1, domain 4 ATHSA_1603 PF04997 RNA polymerase Rpb1, domain 1 ATHSA_1603 PF04983 RNA polymerase Rpb1, domain 3 ATHSA_1604 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATHSA_1604 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATHSA_1606 PF00809 Pterin binding enzyme ATHSA_1606 PF02310 B12 binding domain ATHSA_1606 PF02965 Vitamin B12 dependent methionine synthase, activation domain ATHSA_1606 PF02574 Homocysteine S-methyltransferase ATHSA_1606 PF02607 B12 binding domain ATHSA_1607 PF00005 ABC transporter ATHSA_1608 PF02361 Cobalt transport protein ATHSA_1611 PF00005 ABC transporter ATHSA_1612 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_1615 PF01899 Na+/H+ ion antiporter subunit ATHSA_1619 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATHSA_1619 PF00361 Proton-conducting membrane transporter ATHSA_1619 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ATHSA_1619 PF13244 Domain of unknown function (DUF4040) ATHSA_1620 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ATHSA_1621 PF00361 Proton-conducting membrane transporter ATHSA_1622 PF00361 Proton-conducting membrane transporter ATHSA_1623 PF00146 NADH dehydrogenase ATHSA_1624 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ATHSA_1626 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ATHSA_1627 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ATHSA_1627 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_1628 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ATHSA_1628 PF00970 Oxidoreductase FAD-binding domain ATHSA_1628 PF00175 Oxidoreductase NAD-binding domain ATHSA_1629 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ATHSA_1629 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_1630 PF00005 ABC transporter ATHSA_1630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_1631 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_1631 PF00005 ABC transporter ATHSA_1634 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_1635 PF02645 Uncharacterised protein, DegV family COG1307 ATHSA_1637 PF13247 4Fe-4S dicluster domain ATHSA_1637 PF00037 4Fe-4S binding domain ATHSA_1638 PF01022 Bacterial regulatory protein, arsR family ATHSA_1639 PF00072 Response regulator receiver domain ATHSA_1639 PF00990 Diguanylate cyclase, GGDEF domain ATHSA_1641 PF00155 Aminotransferase class I and II ATHSA_1642 PF00871 Acetokinase family ATHSA_1643 PF01515 Phosphate acetyl/butaryl transferase ATHSA_1644 PF00871 Acetokinase family ATHSA_1650 PF08501 Shikimate dehydrogenase substrate binding domain ATHSA_1650 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ATHSA_1651 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATHSA_1651 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ATHSA_1652 PF01220 Dehydroquinase class II ATHSA_1654 PF00994 Probable molybdopterin binding domain ATHSA_1654 PF03453 MoeA N-terminal region (domain I and II) ATHSA_1654 PF03454 MoeA C-terminal region (domain IV) ATHSA_1655 PF00994 Probable molybdopterin binding domain ATHSA_1656 PF00288 GHMP kinases N terminal domain ATHSA_1656 PF08544 GHMP kinases C terminal ATHSA_1656 PF10509 Galactokinase galactose-binding signature ATHSA_1657 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ATHSA_1657 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ATHSA_1659 PF02929 Beta galactosidase small chain ATHSA_1659 PF16353 Domain of unknown function(DUF4981) ATHSA_1659 PF00703 Glycosyl hydrolases family 2 ATHSA_1659 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ATHSA_1659 PF02837 Glycosyl hydrolases family 2, sugar binding domain ATHSA_1661 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1662 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1664 PF00356 Bacterial regulatory proteins, lacI family ATHSA_1666 PF01250 Ribosomal protein S6 ATHSA_1667 PF00436 Single-strand binding protein family ATHSA_1668 PF01084 Ribosomal protein S18 ATHSA_1669 PF01281 Ribosomal protein L9, N-terminal domain ATHSA_1669 PF03948 Ribosomal protein L9, C-terminal domain ATHSA_1670 PF12706 Beta-lactamase superfamily domain ATHSA_1670 PF00753 Metallo-beta-lactamase superfamily ATHSA_1672 PF01145 SPFH domain / Band 7 family ATHSA_1675 PF00156 Phosphoribosyl transferase domain ATHSA_1676 PF18146 Damage-inducible protein CinA KH domain ATHSA_1676 PF00994 Probable molybdopterin binding domain ATHSA_1676 PF02464 Competence-damaged protein ATHSA_1677 PF00293 NUDIX domain ATHSA_1679 PF03023 Lipid II flippase MurJ ATHSA_1680 PF02086 D12 class N6 adenine-specific DNA methyltransferase ATHSA_1684 PF02801 Beta-ketoacyl synthase, C-terminal domain ATHSA_1684 PF00109 Beta-ketoacyl synthase, N-terminal domain ATHSA_1686 PF07977 FabA-like domain ATHSA_1687 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATHSA_1687 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATHSA_1688 PF03060 Nitronate monooxygenase ATHSA_1689 PF00698 Acyl transferase domain ATHSA_1690 PF00550 Phosphopantetheine attachment site ATHSA_1692 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATHSA_1692 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATHSA_1693 PF00596 Class II Aldolase and Adducin N-terminal domain ATHSA_1694 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1695 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1697 PF13685 Iron-containing alcohol dehydrogenase ATHSA_1698 PF05025 RbsD / FucU transport protein family ATHSA_1699 PF13416 Bacterial extracellular solute-binding protein ATHSA_1700 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1701 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1702 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ATHSA_1703 PF11762 L-arabinose isomerase C-terminal domain ATHSA_1703 PF02610 L-arabinose isomerase ATHSA_1704 PF00356 Bacterial regulatory proteins, lacI family ATHSA_1706 PF01380 SIS domain ATHSA_1707 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_1708 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1709 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1709 PF12911 N-terminal TM domain of oligopeptide transport permease C ATHSA_1710 PF00005 ABC transporter ATHSA_1710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_1711 PF00005 ABC transporter ATHSA_1711 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_1712 PF00083 Sugar (and other) transporter ATHSA_1713 PF07075 Protein of unknown function (DUF1343) ATHSA_1715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_1716 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATHSA_1716 PF00933 Glycosyl hydrolase family 3 N terminal domain ATHSA_1717 PF00144 Beta-lactamase ATHSA_1718 PF03702 Anhydro-N-acetylmuramic acid kinase ATHSA_1719 PF07702 UTRA domain ATHSA_1719 PF00392 Bacterial regulatory proteins, gntR family ATHSA_1721 PF00877 NlpC/P60 family ATHSA_1722 PF00829 Ribosomal prokaryotic L21 protein ATHSA_1724 PF01016 Ribosomal L27 protein ATHSA_1725 PF12822 ECF transporter, substrate-specific component ATHSA_1726 PF00572 Ribosomal protein L13 ATHSA_1727 PF00380 Ribosomal protein S9/S16 ATHSA_1728 PF08275 DNA primase catalytic core, N-terminal domain ATHSA_1728 PF01807 CHC2 zinc finger ATHSA_1729 PF03979 Sigma-70 factor, region 1.1 ATHSA_1729 PF04542 Sigma-70 region 2 ATHSA_1729 PF00140 Sigma-70 factor, region 1.2 ATHSA_1729 PF04539 Sigma-70 region 3 ATHSA_1729 PF04545 Sigma-70, region 4 ATHSA_1730 PF00483 Nucleotidyl transferase ATHSA_1731 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_1731 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATHSA_1733 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase ATHSA_1733 PF01676 Metalloenzyme superfamily ATHSA_1734 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1735 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1738 PF00356 Bacterial regulatory proteins, lacI family ATHSA_1740 PF00266 Aminotransferase class-V ATHSA_1741 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATHSA_1741 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATHSA_1742 PF07687 Peptidase dimerisation domain ATHSA_1742 PF01546 Peptidase family M20/M25/M40 ATHSA_1743 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATHSA_1743 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATHSA_1744 PF01979 Amidohydrolase family ATHSA_1745 PF01979 Amidohydrolase family ATHSA_1746 PF01180 Dihydroorotate dehydrogenase ATHSA_1747 PF00356 Bacterial regulatory proteins, lacI family ATHSA_1748 PF00005 ABC transporter ATHSA_1749 PF02653 Branched-chain amino acid transport system / permease component ATHSA_1750 PF13407 Periplasmic binding protein domain ATHSA_1751 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATHSA_1751 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATHSA_1752 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATHSA_1755 PF00480 ROK family ATHSA_1759 PF01966 HD domain ATHSA_1759 PF00072 Response regulator receiver domain ATHSA_1760 PF02163 Peptidase family M50 ATHSA_1761 PF00849 RNA pseudouridylate synthase ATHSA_1762 PF01252 Signal peptidase (SPase) II ATHSA_1763 PF03705 CheR methyltransferase, all-alpha domain ATHSA_1763 PF01739 CheR methyltransferase, SAM binding domain ATHSA_1765 PF02811 PHP domain ATHSA_1766 PF01709 Transcriptional regulator ATHSA_1768 PF01969 Protein of unknown function DUF111 ATHSA_1769 PF00731 AIR carboxylase ATHSA_1770 PF02540 NAD synthase ATHSA_1774 PF02082 Transcriptional regulator ATHSA_1776 PF00301 Rubredoxin ATHSA_1777 PF17820 PDZ domain ATHSA_1777 PF13180 PDZ domain ATHSA_1778 PF01144 Coenzyme A transferase ATHSA_1779 PF01144 Coenzyme A transferase ATHSA_1780 PF03051 Peptidase C1-like family ATHSA_1781 PF17158 Membrane-associated sensor, integral membrane domain ATHSA_1781 PF00990 Diguanylate cyclase, GGDEF domain ATHSA_1782 PF04055 Radical SAM superfamily ATHSA_1785 PF00440 Bacterial regulatory proteins, tetR family ATHSA_1787 PF01029 NusB family ATHSA_1787 PF01189 16S rRNA methyltransferase RsmB/F ATHSA_1788 PF04055 Radical SAM superfamily ATHSA_1789 PF03193 RsgA GTPase ATHSA_1789 PF16745 RsgA N-terminal domain ATHSA_1790 PF00834 Ribulose-phosphate 3 epimerase family ATHSA_1791 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ATHSA_1791 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ATHSA_1792 PF02237 Biotin protein ligase C terminal domain ATHSA_1792 PF03099 Biotin/lipoate A/B protein ligase family ATHSA_1794 PF02548 Ketopantoate hydroxymethyltransferase ATHSA_1798 PF01799 [2Fe-2S] binding domain ATHSA_1798 PF00111 2Fe-2S iron-sulfur cluster binding domain ATHSA_1801 PF01642 Methylmalonyl-CoA mutase ATHSA_1801 PF02310 B12 binding domain ATHSA_1802 PF01642 Methylmalonyl-CoA mutase ATHSA_1802 PF02310 B12 binding domain ATHSA_1803 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATHSA_1803 PF14579 Helix-hairpin-helix motif ATHSA_1803 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATHSA_1803 PF02811 PHP domain ATHSA_1804 PF00005 ABC transporter ATHSA_1806 PF00700 Bacterial flagellin C-terminal helical region ATHSA_1806 PF00669 Bacterial flagellin N-terminal helical region ATHSA_1807 PF01926 50S ribosome-binding GTPase ATHSA_1807 PF07650 KH domain ATHSA_1808 PF03746 LamB/YcsF family ATHSA_1809 PF02682 Carboxyltransferase domain, subdomain C and D ATHSA_1810 PF02626 Carboxyltransferase domain, subdomain A and B ATHSA_1811 PF00294 pfkB family carbohydrate kinase ATHSA_1812 PF04227 Indigoidine synthase A like protein ATHSA_1813 PF02465 Flagellar hook-associated protein 2 N-terminus ATHSA_1813 PF07195 Flagellar hook-associated protein 2 C-terminus ATHSA_1814 PF03646 FlaG protein ATHSA_1816 PF13439 Glycosyltransferase Family 4 ATHSA_1816 PF00534 Glycosyl transferases group 1 ATHSA_1819 PF13941 MutL protein ATHSA_1822 PF00156 Phosphoribosyl transferase domain ATHSA_1824 PF00271 Helicase conserved C-terminal domain ATHSA_1824 PF17191 RecG wedge domain ATHSA_1824 PF00270 DEAD/DEAH box helicase ATHSA_1828 PF01713 Smr domain ATHSA_1828 PF00488 MutS domain V ATHSA_1829 PF02491 SHS2 domain inserted in FTSA ATHSA_1830 PF02272 DHHA1 domain ATHSA_1830 PF00571 CBS domain ATHSA_1830 PF01368 DHH family ATHSA_1830 PF12627 Probable RNA and SrmB- binding site of polymerase A ATHSA_1830 PF01743 Poly A polymerase head domain ATHSA_1832 PF01197 Ribosomal protein L31 ATHSA_1833 PF01336 OB-fold nucleic acid binding domain ATHSA_1833 PF00152 tRNA synthetases class II (D, K and N) ATHSA_1834 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain ATHSA_1834 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 ATHSA_1837 PF00696 Amino acid kinase family ATHSA_1838 PF01515 Phosphate acetyl/butaryl transferase ATHSA_1839 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ATHSA_1839 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATHSA_1840 PF01725 Ham1 family ATHSA_1841 PF05362 Lon protease (S16) C-terminal proteolytic domain ATHSA_1841 PF13654 AAA domain ATHSA_1843 PF16363 GDP-mannose 4,6 dehydratase ATHSA_1844 PF12002 MgsA AAA+ ATPase C terminal ATHSA_1844 PF16193 AAA C-terminal domain ATHSA_1844 PF00004 ATPase family associated with various cellular activities (AAA) ATHSA_1845 PF01790 Prolipoprotein diacylglyceryl transferase ATHSA_1846 PF01367 5'-3' exonuclease, C-terminal SAM fold ATHSA_1846 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATHSA_1846 PF00476 DNA polymerase family A ATHSA_1846 PF01612 3'-5' exonuclease ATHSA_1847 PF00582 Universal stress protein family ATHSA_1848 PF01938 TRAM domain ATHSA_1848 PF00919 Uncharacterized protein family UPF0004 ATHSA_1848 PF04055 Radical SAM superfamily ATHSA_1849 PF05190 MutS family domain IV ATHSA_1849 PF05188 MutS domain II ATHSA_1849 PF01624 MutS domain I ATHSA_1849 PF00488 MutS domain V ATHSA_1849 PF05192 MutS domain III ATHSA_1850 PF00365 Phosphofructokinase ATHSA_1851 PF00224 Pyruvate kinase, barrel domain ATHSA_1851 PF02887 Pyruvate kinase, alpha/beta domain ATHSA_1853 PF00365 Phosphofructokinase ATHSA_1854 PF09335 SNARE associated Golgi protein ATHSA_1855 PF00672 HAMP domain ATHSA_1855 PF01966 HD domain ATHSA_1856 PF02872 5'-nucleotidase, C-terminal domain ATHSA_1856 PF00149 Calcineurin-like phosphoesterase ATHSA_1859 PF00318 Ribosomal protein S2 ATHSA_1860 PF01063 Amino-transferase class IV ATHSA_1861 PF01547 Bacterial extracellular solute-binding protein ATHSA_1862 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1863 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1864 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATHSA_1864 PF13378 Enolase C-terminal domain-like ATHSA_1866 PF18074 Primosomal protein N C-terminal domain ATHSA_1866 PF17764 3′ DNA-binding domain (3′BD) ATHSA_1866 PF00271 Helicase conserved C-terminal domain ATHSA_1866 PF04851 Type III restriction enzyme, res subunit ATHSA_1866 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ATHSA_1869 PF00128 Alpha amylase, catalytic domain ATHSA_1869 PF02903 Alpha amylase, N-terminal ig-like domain ATHSA_1870 PF02547 Queuosine biosynthesis protein ATHSA_1871 PF04002 RadC-like JAB domain ATHSA_1872 PF00364 Biotin-requiring enzyme ATHSA_1872 PF00682 HMGL-like ATHSA_1872 PF02436 Conserved carboxylase domain ATHSA_1873 PF12002 MgsA AAA+ ATPase C terminal ATHSA_1873 PF01661 Macro domain ATHSA_1873 PF16193 AAA C-terminal domain ATHSA_1873 PF05496 Holliday junction DNA helicase RuvB P-loop domain ATHSA_1876 PF00313 'Cold-shock' DNA-binding domain ATHSA_1881 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATHSA_1881 PF00037 4Fe-4S binding domain ATHSA_1881 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ATHSA_1883 PF01926 50S ribosome-binding GTPase ATHSA_1883 PF12631 MnmE helical domain ATHSA_1883 PF10396 GTP-binding protein TrmE N-terminus ATHSA_1884 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATHSA_1885 PF01406 tRNA synthetases class I (C) catalytic domain ATHSA_1885 PF09190 DALR domain ATHSA_1887 PF01751 Toprim domain ATHSA_1887 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATHSA_1887 PF00986 DNA gyrase B subunit, carboxyl terminus ATHSA_1887 PF00204 DNA gyrase B ATHSA_1889 PF02075 Crossover junction endodeoxyribonuclease RuvC ATHSA_1890 PF14579 Helix-hairpin-helix motif ATHSA_1890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATHSA_1890 PF02811 PHP domain ATHSA_1890 PF00929 Exonuclease ATHSA_1890 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATHSA_1895 PF00263 Bacterial type II and III secretion system protein ATHSA_1895 PF03958 Bacterial type II/III secretion system short domain ATHSA_1901 PF00072 Response regulator receiver domain ATHSA_1901 PF00158 Sigma-54 interaction domain ATHSA_1901 PF02954 Bacterial regulatory protein, Fis family ATHSA_1902 PF00158 Sigma-54 interaction domain ATHSA_1902 PF00072 Response regulator receiver domain ATHSA_1902 PF02954 Bacterial regulatory protein, Fis family ATHSA_1903 PF01297 Zinc-uptake complex component A periplasmic ATHSA_1904 PF00005 ABC transporter ATHSA_1905 PF00950 ABC 3 transport family ATHSA_1908 PF02374 Anion-transporting ATPase ATHSA_1909 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ATHSA_1911 PF04055 Radical SAM superfamily ATHSA_1911 PF01018 GTP1/OBG ATHSA_1911 PF01926 50S ribosome-binding GTPase ATHSA_1912 PF00753 Metallo-beta-lactamase superfamily ATHSA_1912 PF17770 Ribonuclease J C-terminal domain ATHSA_1912 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ATHSA_1913 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_1913 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATHSA_1915 PF13287 Fn3 associated ATHSA_1915 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ATHSA_1915 PF00703 Glycosyl hydrolases family 2 ATHSA_1915 PF02837 Glycosyl hydrolases family 2, sugar binding domain ATHSA_1915 PF16355 Domain of unknown function (DUF4982) ATHSA_1916 PF00232 Glycosyl hydrolase family 1 ATHSA_1917 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ATHSA_1918 PF00356 Bacterial regulatory proteins, lacI family ATHSA_1919 PF00005 ABC transporter ATHSA_1919 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_1920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATHSA_1920 PF00005 ABC transporter ATHSA_1921 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1923 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_1924 PF04551 GcpE protein ATHSA_1925 PF02569 Pantoate-beta-alanine ligase ATHSA_1926 PF02645 Uncharacterised protein, DegV family COG1307 ATHSA_1928 PF00004 ATPase family associated with various cellular activities (AAA) ATHSA_1928 PF17871 AAA lid domain ATHSA_1928 PF02861 Clp amino terminal domain, pathogenicity island component ATHSA_1928 PF07724 AAA domain (Cdc48 subfamily) ATHSA_1928 PF10431 C-terminal, D2-small domain, of ClpB protein ATHSA_1929 PF18073 Rubredoxin metal binding domain ATHSA_1930 PF02457 DisA bacterial checkpoint controller nucleotide-binding ATHSA_1930 PF10635 DisA bacterial checkpoint controller linker region ATHSA_1930 PF00633 Helix-hairpin-helix motif ATHSA_1932 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ATHSA_1933 PF06968 Biotin and Thiamin Synthesis associated domain ATHSA_1933 PF04055 Radical SAM superfamily ATHSA_1936 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATHSA_1936 PF02906 Iron only hydrogenase large subunit, C-terminal domain ATHSA_1936 PF02256 Iron hydrogenase small subunit ATHSA_1936 PF00037 4Fe-4S binding domain ATHSA_1938 PF00580 UvrD/REP helicase N-terminal domain ATHSA_1938 PF13361 UvrD-like helicase C-terminal domain ATHSA_1942 PF01648 4'-phosphopantetheinyl transferase superfamily ATHSA_1945 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1946 PF00528 Binding-protein-dependent transport system inner membrane component ATHSA_1946 PF14785 Maltose transport system permease protein MalF P2 domain ATHSA_1948 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ATHSA_1948 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ATHSA_1949 PF00128 Alpha amylase, catalytic domain ATHSA_1951 PF00106 short chain dehydrogenase ATHSA_1953 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ATHSA_1959 PF04760 Translation initiation factor IF-2, N-terminal region ATHSA_1959 PF11987 Translation-initiation factor 2 ATHSA_1959 PF00009 Elongation factor Tu GTP binding domain ATHSA_1961 PF00575 S1 RNA binding domain ATHSA_1961 PF08529 NusA N-terminal domain ATHSA_1961 PF13184 NusA-like KH domain ATHSA_1962 PF02576 RimP N-terminal domain ATHSA_1962 PF17384 RimP C-terminal SH3 domain ATHSA_1964 PF03951 Glutamine synthetase, beta-Grasp domain ATHSA_1964 PF00120 Glutamine synthetase, catalytic domain ATHSA_1967 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATHSA_1967 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATHSA_1970 PF01758 Sodium Bile acid symporter family ATHSA_1971 PF01451 Low molecular weight phosphotyrosine protein phosphatase ATHSA_1972 PF01022 Bacterial regulatory protein, arsR family ATHSA_1975 PF01168 Alanine racemase, N-terminal domain ATHSA_1977 PF00005 ABC transporter ATHSA_1977 PF00664 ABC transporter transmembrane region ATHSA_p10001 PF01051 Initiator Replication protein ATHSA_p10002 PF13361 UvrD-like helicase C-terminal domain ATHSA_p10002 PF00580 UvrD/REP helicase N-terminal domain ATHSA_p10003 PF00216 Bacterial DNA-binding protein ATHSA_p10004 PF17209 Hfq protein ATHSA_p10011 PF01381 Helix-turn-helix ATHSA_p10015 PF13361 UvrD-like helicase C-terminal domain ATHSA_p10015 PF00580 UvrD/REP helicase N-terminal domain ATHSA_p10016 PF01555 DNA methylase ATHSA_p10020 PF00990 Diguanylate cyclase, GGDEF domain ATHSA_p10020 PF13185 GAF domain ATHSA_p10029 PF00589 Phage integrase family ATHSA_p10029 PF02899 Phage integrase, N-terminal SAM-like domain ATHSA_p10037 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATHSA_p10038 PF00480 ROK family ATHSA_p10039 PF01695 IstB-like ATP binding protein ATHSA_p10042 PF13614 AAA domain ATHSA_p20003 PF13614 AAA domain ATHSA_p20016 PF00872 Transposase, Mutator family ATHSA_p20021 PF02899 Phage integrase, N-terminal SAM-like domain ATHSA_p20021 PF00589 Phage integrase family ATHSA_p20022 PF00872 Transposase, Mutator family ATHSA_p20026 PF00258 Flavodoxin ATHSA_p20026 PF00753 Metallo-beta-lactamase superfamily ATHSA_p20032 PF00872 Transposase, Mutator family ATHSA_p20033 PF00872 Transposase, Mutator family ATHSA_p20034 PF01555 DNA methylase ATHSA_p20036 PF00872 Transposase, Mutator family ATHSA_p20040 PF00872 Transposase, Mutator family ATHSA_p20044 PF17209 Hfq protein ATHSA_p20045 PF00216 Bacterial DNA-binding protein ATHSA_p20046 PF04343 Protein of unknown function, DUF488