locus-tag class description ATOBIA_N00010 PF00308 Bacterial dnaA protein ATOBIA_N00010 PF08299 Bacterial dnaA protein helix-turn-helix ATOBIA_N00010 PF11638 DnaA N-terminal domain ATOBIA_N00020 PF00712 DNA polymerase III beta subunit, N-terminal domain ATOBIA_N00020 PF02767 DNA polymerase III beta subunit, central domain ATOBIA_N00020 PF02768 DNA polymerase III beta subunit, C-terminal domain ATOBIA_N00030 PF02463 RecF/RecN/SMC N terminal domain ATOBIA_N00050 PF00204 DNA gyrase B ATOBIA_N00050 PF00986 DNA gyrase B subunit, carboxyl terminus ATOBIA_N00050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATOBIA_N00050 PF01751 Toprim domain ATOBIA_N00060 PF00521 DNA gyrase/topoisomerase IV, subunit A ATOBIA_N00060 PF03989 DNA gyrase C-terminal domain, beta-propeller ATOBIA_N00080 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N00090 PF00005 ABC transporter ATOBIA_N00100 PF14310 Fibronectin type III-like domain ATOBIA_N00100 PF00933 Glycosyl hydrolase family 3 N terminal domain ATOBIA_N00100 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATOBIA_N00120 PF00679 Elongation factor G C-terminus ATOBIA_N00120 PF00009 Elongation factor Tu GTP binding domain ATOBIA_N00120 PF03144 Elongation factor Tu domain 2 ATOBIA_N00130 PF08494 DEAD/H associated ATOBIA_N00130 PF00270 DEAD/DEAH box helicase ATOBIA_N00130 PF00271 Helicase conserved C-terminal domain ATOBIA_N00150 PF03458 UPF0126 domain ATOBIA_N00170 PF01250 Ribosomal protein S6 ATOBIA_N00180 PF00436 Single-strand binding protein family ATOBIA_N00190 PF01084 Ribosomal protein S18 ATOBIA_N00210 PF03948 Ribosomal protein L9, C-terminal domain ATOBIA_N00210 PF01281 Ribosomal protein L9, N-terminal domain ATOBIA_N00220 PF00772 DnaB-like helicase N terminal domain ATOBIA_N00220 PF03796 DnaB-like helicase C terminal domain ATOBIA_N00230 PF00709 Adenylosuccinate synthetase ATOBIA_N00250 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATOBIA_N00250 PF02843 Phosphoribosylglycinamide synthetase, C domain ATOBIA_N00250 PF02844 Phosphoribosylglycinamide synthetase, N domain ATOBIA_N00260 PF00293 NUDIX domain ATOBIA_N00270 PF00989 PAS fold ATOBIA_N00270 PF00512 His Kinase A (phospho-acceptor) domain ATOBIA_N00270 PF16736 Single Cache-like ATOBIA_N00270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATOBIA_N00280 PF00486 Transcriptional regulatory protein, C terminal ATOBIA_N00280 PF00072 Response regulator receiver domain ATOBIA_N00310 PF00005 ABC transporter ATOBIA_N00310 PF00664 ABC transporter transmembrane region ATOBIA_N00320 PF02660 Glycerol-3-phosphate acyltransferase ATOBIA_N00340 PF08543 Phosphomethylpyrimidine kinase ATOBIA_N00350 PF00731 AIR carboxylase ATOBIA_N00370 PF04203 Sortase domain ATOBIA_N00380 PF00156 Phosphoribosyl transferase domain ATOBIA_N00380 PF13537 Glutamine amidotransferase domain ATOBIA_N00390 PF02769 AIR synthase related protein, C-terminal domain ATOBIA_N00390 PF00586 AIR synthase related protein, N-terminal domain ATOBIA_N00460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ATOBIA_N00480 PF00596 Class II Aldolase and Adducin N-terminal domain ATOBIA_N00490 PF03611 PTS system sugar-specific permease component ATOBIA_N00500 PF02733 Dak1 domain ATOBIA_N00500 PF02734 DAK2 domain ATOBIA_N00520 PF00551 Formyl transferase ATOBIA_N00530 PF00196 Bacterial regulatory proteins, luxR family ATOBIA_N00530 PF00072 Response regulator receiver domain ATOBIA_N00560 PF04371 Porphyromonas-type peptidyl-arginine deiminase ATOBIA_N00580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATOBIA_N00580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATOBIA_N00590 PF13520 Amino acid permease ATOBIA_N00610 PF13520 Amino acid permease ATOBIA_N00620 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ATOBIA_N00620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATOBIA_N00620 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ATOBIA_N00620 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ATOBIA_N00620 PF10371 Domain of unknown function ATOBIA_N00640 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ATOBIA_N00640 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ATOBIA_N00650 PF03577 Peptidase family C69 ATOBIA_N00690 PF07694 5TMR of 5TMR-LYT ATOBIA_N00690 PF13492 GAF domain ATOBIA_N00690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATOBIA_N00690 PF06580 Histidine kinase ATOBIA_N00700 PF00072 Response regulator receiver domain ATOBIA_N00700 PF04397 LytTr DNA-binding domain ATOBIA_N00730 PF01569 PAP2 superfamily ATOBIA_N00740 PF00085 Thioredoxin ATOBIA_N00760 PF00342 Phosphoglucose isomerase ATOBIA_N00800 PF01522 Polysaccharide deacetylase ATOBIA_N00820 PF01081 KDPG and KHG aldolase ATOBIA_N00830 PF00294 pfkB family carbohydrate kinase ATOBIA_N00850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATOBIA_N00850 PF01842 ACT domain ATOBIA_N00850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATOBIA_N00890 PF00455 DeoR C terminal sensor domain ATOBIA_N00890 PF08220 DeoR-like helix-turn-helix domain ATOBIA_N00900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATOBIA_N00910 PF03611 PTS system sugar-specific permease component ATOBIA_N00930 PF00456 Transketolase, thiamine diphosphate binding domain ATOBIA_N00930 PF02780 Transketolase, C-terminal domain ATOBIA_N00930 PF02779 Transketolase, pyrimidine binding domain ATOBIA_N00940 PF02780 Transketolase, C-terminal domain ATOBIA_N00940 PF02779 Transketolase, pyrimidine binding domain ATOBIA_N00940 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ATOBIA_N00950 PF01791 DeoC/LacD family aldolase ATOBIA_N00960 PF00923 Transaldolase/Fructose-6-phosphate aldolase ATOBIA_N00980 PF00571 CBS domain ATOBIA_N00980 PF01769 Divalent cation transporter ATOBIA_N00980 PF03448 MgtE intracellular N domain ATOBIA_N01000 PF00455 DeoR C terminal sensor domain ATOBIA_N01000 PF08220 DeoR-like helix-turn-helix domain ATOBIA_N01010 PF02901 Pyruvate formate lyase-like ATOBIA_N01010 PF01228 Glycine radical ATOBIA_N01020 PF04055 Radical SAM superfamily ATOBIA_N01030 PF00923 Transaldolase/Fructose-6-phosphate aldolase ATOBIA_N01070 PF00923 Transaldolase/Fructose-6-phosphate aldolase ATOBIA_N01090 PF04204 Homoserine O-succinyltransferase ATOBIA_N01120 PF00270 DEAD/DEAH box helicase ATOBIA_N01120 PF00271 Helicase conserved C-terminal domain ATOBIA_N01130 PF17785 PUA-like domain ATOBIA_N01130 PF10672 S-adenosylmethionine-dependent methyltransferase ATOBIA_N01170 PF14437 MafB19-like deaminase ATOBIA_N01180 PF04011 LemA family ATOBIA_N01190 PF12850 Calcineurin-like phosphoesterase superfamily domain ATOBIA_N01220 PF01336 OB-fold nucleic acid binding domain ATOBIA_N01220 PF00152 tRNA synthetases class II (D, K and N) ATOBIA_N01260 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATOBIA_N01260 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ATOBIA_N01270 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATOBIA_N01270 PF00037 4Fe-4S binding domain ATOBIA_N01270 PF02256 Iron hydrogenase small subunit ATOBIA_N01270 PF02906 Iron only hydrogenase large subunit, C-terminal domain ATOBIA_N01280 PF00069 Protein kinase domain ATOBIA_N01330 PF01053 Cys/Met metabolism PLP-dependent enzyme ATOBIA_N01360 PF00012 Hsp70 protein ATOBIA_N01370 PF01025 GrpE ATOBIA_N01380 PF00226 DnaJ domain ATOBIA_N01380 PF01556 DnaJ C terminal domain ATOBIA_N01380 PF00684 DnaJ central domain ATOBIA_N01390 PF13411 MerR HTH family regulatory protein ATOBIA_N01400 PF00004 ATPase family associated with various cellular activities (AAA) ATOBIA_N01400 PF10431 C-terminal, D2-small domain, of ClpB protein ATOBIA_N01400 PF02861 Clp amino terminal domain, pathogenicity island component ATOBIA_N01400 PF07724 AAA domain (Cdc48 subfamily) ATOBIA_N01400 PF17871 AAA lid domain ATOBIA_N01410 PF00069 Protein kinase domain ATOBIA_N01410 PF03793 PASTA domain ATOBIA_N01440 PF07702 UTRA domain ATOBIA_N01440 PF00392 Bacterial regulatory proteins, gntR family ATOBIA_N01460 PF07702 UTRA domain ATOBIA_N01460 PF00392 Bacterial regulatory proteins, gntR family ATOBIA_N01470 PF00834 Ribulose-phosphate 3 epimerase family ATOBIA_N01480 PF01238 Phosphomannose isomerase type I ATOBIA_N01500 PF03609 PTS system sorbose-specific iic component ATOBIA_N01510 PF03830 PTS system sorbose subfamily IIB component ATOBIA_N01530 PF01791 DeoC/LacD family aldolase ATOBIA_N01540 PF01238 Phosphomannose isomerase type I ATOBIA_N01560 PF00753 Metallo-beta-lactamase superfamily ATOBIA_N01570 PF01171 PP-loop family ATOBIA_N01570 PF11734 TilS substrate C-terminal domain ATOBIA_N01580 PF00156 Phosphoribosyl transferase domain ATOBIA_N01580 PF11734 TilS substrate C-terminal domain ATOBIA_N01580 PF01171 PP-loop family ATOBIA_N01590 PF01434 Peptidase family M41 ATOBIA_N01590 PF06480 FtsH Extracellular ATOBIA_N01590 PF17862 AAA+ lid domain ATOBIA_N01590 PF00004 ATPase family associated with various cellular activities (AAA) ATOBIA_N01600 PF13419 Haloacid dehalogenase-like hydrolase ATOBIA_N01640 PF07702 UTRA domain ATOBIA_N01640 PF00392 Bacterial regulatory proteins, gntR family ATOBIA_N01680 PF03830 PTS system sorbose subfamily IIB component ATOBIA_N01700 PF03613 PTS system mannose/fructose/sorbose family IID component ATOBIA_N01720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATOBIA_N01720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATOBIA_N01720 PF01842 ACT domain ATOBIA_N01730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATOBIA_N01730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATOBIA_N01740 PF00005 ABC transporter ATOBIA_N01750 PF03649 Uncharacterised protein family (UPF0014) ATOBIA_N01760 PF00155 Aminotransferase class I and II ATOBIA_N01780 PF03372 Endonuclease/Exonuclease/phosphatase family ATOBIA_N01800 PF02146 Sir2 family ATOBIA_N01810 PF01227 GTP cyclohydrolase I ATOBIA_N01820 PF00809 Pterin binding enzyme ATOBIA_N01840 PF03309 Type III pantothenate kinase ATOBIA_N01850 PF01197 Ribosomal protein L31 ATOBIA_N01870 PF03462 PCRF domain ATOBIA_N01870 PF00472 RF-1 domain ATOBIA_N01880 PF05175 Methyltransferase small domain ATOBIA_N01880 PF17827 PrmC N-terminal domain ATOBIA_N01890 PF01300 Telomere recombination ATOBIA_N01900 PF02502 Ribose/Galactose Isomerase ATOBIA_N01930 PF00119 ATP synthase A chain ATOBIA_N01940 PF00137 ATP synthase subunit C ATOBIA_N01960 PF00213 ATP synthase delta (OSCP) subunit ATOBIA_N01970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATOBIA_N01970 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATOBIA_N01970 PF00306 ATP synthase alpha/beta chain, C terminal domain ATOBIA_N01980 PF00231 ATP synthase ATOBIA_N01990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATOBIA_N01990 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATOBIA_N02000 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ATOBIA_N02000 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATOBIA_N02010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATOBIA_N02040 PF00483 Nucleotidyl transferase ATOBIA_N02050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATOBIA_N02050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATOBIA_N02050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATOBIA_N02050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATOBIA_N02070 PF07516 SecA Wing and Scaffold domain ATOBIA_N02070 PF02810 SEC-C motif ATOBIA_N02070 PF07517 SecA DEAD-like domain ATOBIA_N02070 PF01043 SecA preprotein cross-linking domain ATOBIA_N02080 PF03462 PCRF domain ATOBIA_N02080 PF00472 RF-1 domain ATOBIA_N02090 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ATOBIA_N02090 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ATOBIA_N02100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ATOBIA_N02110 PF00005 ABC transporter ATOBIA_N02120 PF02687 FtsX-like permease family ATOBIA_N02120 PF18075 FtsX extracellular domain ATOBIA_N02130 PF00575 S1 RNA binding domain ATOBIA_N02130 PF00773 RNB domain ATOBIA_N02130 PF17876 Cold shock domain ATOBIA_N02130 PF08206 Ribonuclease B OB domain ATOBIA_N02150 PF01668 SmpB protein ATOBIA_N02160 PF00301 Rubredoxin ATOBIA_N02160 PF01613 Flavin reductase like domain ATOBIA_N02170 PF00301 Rubredoxin ATOBIA_N02250 PF02384 N-6 DNA Methylase ATOBIA_N02280 PF00392 Bacterial regulatory proteins, gntR family ATOBIA_N02280 PF07702 UTRA domain ATOBIA_N02290 PF00367 phosphotransferase system, EIIB ATOBIA_N02290 PF02378 Phosphotransferase system, EIIC ATOBIA_N02300 PF02056 Family 4 glycosyl hydrolase ATOBIA_N02300 PF11975 Family 4 glycosyl hydrolase C-terminal domain ATOBIA_N02320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ATOBIA_N02360 PF00005 ABC transporter ATOBIA_N02370 PF00196 Bacterial regulatory proteins, luxR family ATOBIA_N02370 PF00072 Response regulator receiver domain ATOBIA_N02390 PF00294 pfkB family carbohydrate kinase ATOBIA_N02400 PF01734 Patatin-like phospholipase ATOBIA_N02410 PF00572 Ribosomal protein L13 ATOBIA_N02420 PF00380 Ribosomal protein S9/S16 ATOBIA_N02430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATOBIA_N02430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATOBIA_N02430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATOBIA_N02430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATOBIA_N02440 PF01380 SIS domain ATOBIA_N02450 PF01648 4'-phosphopantetheinyl transferase superfamily ATOBIA_N02460 PF03853 YjeF-related protein N-terminus ATOBIA_N02460 PF01256 Carbohydrate kinase ATOBIA_N02470 PF00842 Alanine racemase, C-terminal domain ATOBIA_N02470 PF01168 Alanine racemase, N-terminal domain ATOBIA_N02480 PF03167 Uracil DNA glycosylase superfamily ATOBIA_N02490 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATOBIA_N02500 PF00814 Glycoprotease family ATOBIA_N02510 PF00072 Response regulator receiver domain ATOBIA_N02510 PF00486 Transcriptional regulatory protein, C terminal ATOBIA_N02520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATOBIA_N02520 PF00512 His Kinase A (phospho-acceptor) domain ATOBIA_N02550 PF00356 Bacterial regulatory proteins, lacI family ATOBIA_N02560 PF00834 Ribulose-phosphate 3 epimerase family ATOBIA_N02570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ATOBIA_N02590 PF00923 Transaldolase/Fructose-6-phosphate aldolase ATOBIA_N02600 PF13173 AAA domain ATOBIA_N02600 PF13635 Domain of unknown function (DUF4143) ATOBIA_N02640 PF01791 DeoC/LacD family aldolase ATOBIA_N02650 PF02698 DUF218 domain ATOBIA_N02660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ATOBIA_N02660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATOBIA_N02660 PF02378 Phosphotransferase system, EIIC ATOBIA_N02670 PF00682 HMGL-like ATOBIA_N02670 PF08502 LeuA allosteric (dimerisation) domain ATOBIA_N02680 PF00330 Aconitase family (aconitate hydratase) ATOBIA_N02690 PF00694 Aconitase C-terminal domain ATOBIA_N02700 PF00180 Isocitrate/isopropylmalate dehydrogenase ATOBIA_N02750 PF00483 Nucleotidyl transferase ATOBIA_N02760 PF02423 Ornithine cyclodeaminase/mu-crystallin family ATOBIA_N02770 PF12804 MobA-like NTP transferase domain ATOBIA_N02780 PF00892 EamA-like transporter family ATOBIA_N02790 PF04991 LicD family ATOBIA_N02810 PF02096 60Kd inner membrane protein ATOBIA_N02810 PF14849 YidC periplasmic domain ATOBIA_N02820 PF00884 Sulfatase ATOBIA_N02850 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ATOBIA_N02850 PF01871 AMMECR1 ATOBIA_N02910 PF02653 Branched-chain amino acid transport system / permease component ATOBIA_N02920 PF00005 ABC transporter ATOBIA_N02920 PF08402 TOBE domain ATOBIA_N02930 PF01979 Amidohydrolase family ATOBIA_N02930 PF13382 Adenine deaminase C-terminal domain ATOBIA_N02940 PF09335 SNARE associated Golgi protein ATOBIA_N02950 PF12169 DNA polymerase III subunits gamma and tau domain III ATOBIA_N02960 PF02575 YbaB/EbfC DNA-binding family ATOBIA_N02970 PF00633 Helix-hairpin-helix motif ATOBIA_N02970 PF02132 RecR protein ATOBIA_N02970 PF13662 Toprim domain ATOBIA_N03000 PF00005 ABC transporter ATOBIA_N03060 PF00633 Helix-hairpin-helix motif ATOBIA_N03060 PF00730 HhH-GPD superfamily base excision DNA repair protein ATOBIA_N03060 PF10576 Iron-sulfur binding domain of endonuclease III ATOBIA_N03070 PF02915 Rubrerythrin ATOBIA_N03090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATOBIA_N03090 PF02806 Alpha amylase, C-terminal all-beta domain ATOBIA_N03090 PF00128 Alpha amylase, catalytic domain ATOBIA_N03100 PF00343 Carbohydrate phosphorylase ATOBIA_N03110 PF00483 Nucleotidyl transferase ATOBIA_N03120 PF00483 Nucleotidyl transferase ATOBIA_N03130 PF08323 Starch synthase catalytic domain ATOBIA_N03130 PF00534 Glycosyl transferases group 1 ATOBIA_N03140 PF02446 4-alpha-glucanotransferase ATOBIA_N03150 PF00881 Nitroreductase family ATOBIA_N03180 PF02903 Alpha amylase, N-terminal ig-like domain ATOBIA_N03180 PF00128 Alpha amylase, catalytic domain ATOBIA_N03220 PF07859 alpha/beta hydrolase fold ATOBIA_N03230 PF00270 DEAD/DEAH box helicase ATOBIA_N03230 PF00271 Helicase conserved C-terminal domain ATOBIA_N03230 PF08148 DSHCT (NUC185) domain ATOBIA_N03270 PF06071 Protein of unknown function (DUF933) ATOBIA_N03270 PF01926 50S ribosome-binding GTPase ATOBIA_N03290 PF02901 Pyruvate formate lyase-like ATOBIA_N03290 PF01228 Glycine radical ATOBIA_N03300 PF01228 Glycine radical ATOBIA_N03300 PF02901 Pyruvate formate lyase-like ATOBIA_N03330 PF04055 Radical SAM superfamily ATOBIA_N03340 PF12464 Maltose acetyltransferase ATOBIA_N03340 PF14602 Hexapeptide repeat of succinyl-transferase ATOBIA_N03340 PF00132 Bacterial transferase hexapeptide (six repeats) ATOBIA_N03360 PF00248 Aldo/keto reductase family ATOBIA_N03370 PF09335 SNARE associated Golgi protein ATOBIA_N03450 PF00437 Type II/IV secretion system protein ATOBIA_N03460 PF00990 Diguanylate cyclase, GGDEF domain ATOBIA_N03460 PF17158 Membrane-associated sensor, integral membrane domain ATOBIA_N03470 PF00072 Response regulator receiver domain ATOBIA_N03470 PF01627 Hpt domain ATOBIA_N03470 PF00512 His Kinase A (phospho-acceptor) domain ATOBIA_N03470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATOBIA_N03470 PF00672 HAMP domain ATOBIA_N03470 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ATOBIA_N03490 PF00072 Response regulator receiver domain ATOBIA_N03510 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ATOBIA_N03510 PF02769 AIR synthase related protein, C-terminal domain ATOBIA_N03510 PF00586 AIR synthase related protein, N-terminal domain ATOBIA_N03540 PF03816 Cell envelope-related transcriptional attenuator domain ATOBIA_N03550 PF00117 Glutamine amidotransferase class-I ATOBIA_N03550 PF00958 GMP synthase C terminal domain ATOBIA_N03570 PF12161 HsdM N-terminal domain ATOBIA_N03570 PF02384 N-6 DNA Methylase ATOBIA_N03590 PF02899 Phage integrase, N-terminal SAM-like domain ATOBIA_N03590 PF00589 Phage integrase family ATOBIA_N03610 PF04851 Type III restriction enzyme, res subunit ATOBIA_N03610 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ATOBIA_N03610 PF00271 Helicase conserved C-terminal domain ATOBIA_N03610 PF08463 EcoEI R protein C-terminal ATOBIA_N03770 PF00696 Amino acid kinase family ATOBIA_N03820 PF04221 RelB antitoxin ATOBIA_N03840 PF00027 Cyclic nucleotide-binding domain ATOBIA_N03840 PF13545 Crp-like helix-turn-helix domain ATOBIA_N03850 PF03063 Prismane/CO dehydrogenase family ATOBIA_N03880 PF07690 Major Facilitator Superfamily ATOBIA_N03910 PF00890 FAD binding domain ATOBIA_N03920 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ATOBIA_N03920 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ATOBIA_N03930 PF08279 HTH domain ATOBIA_N03930 PF02829 3H domain ATOBIA_N03940 PF00881 Nitroreductase family ATOBIA_N03950 PF01625 Peptide methionine sulfoxide reductase ATOBIA_N03950 PF08534 Redoxin ATOBIA_N03950 PF01641 SelR domain ATOBIA_N03960 PF03577 Peptidase family C69 ATOBIA_N04000 PF13673 Acetyltransferase (GNAT) domain ATOBIA_N04000 PF13302 Acetyltransferase (GNAT) domain ATOBIA_N04000 PF03352 Methyladenine glycosylase ATOBIA_N04000 PF00117 Glutamine amidotransferase class-I ATOBIA_N04000 PF00958 GMP synthase C terminal domain ATOBIA_N04050 PF06100 MCRA family ATOBIA_N04130 PF00999 Sodium/hydrogen exchanger family ATOBIA_N04170 PF13411 MerR HTH family regulatory protein ATOBIA_N04200 PF01661 Macro domain ATOBIA_N04240 PF00557 Metallopeptidase family M24 ATOBIA_N04250 PF00497 Bacterial extracellular solute-binding proteins, family 3 ATOBIA_N04260 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N04270 PF00005 ABC transporter ATOBIA_N04300 PF03816 Cell envelope-related transcriptional attenuator domain ATOBIA_N04320 PF09383 NIL domain ATOBIA_N04320 PF00005 ABC transporter ATOBIA_N04330 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N04340 PF03180 NLPA lipoprotein ATOBIA_N04350 PF17757 UvrB interaction domain ATOBIA_N04350 PF03461 TRCF domain ATOBIA_N04350 PF00271 Helicase conserved C-terminal domain ATOBIA_N04350 PF00270 DEAD/DEAH box helicase ATOBIA_N04350 PF02559 CarD-like/TRCF domain ATOBIA_N04360 PF03819 MazG nucleotide pyrophosphohydrolase domain ATOBIA_N04380 PF02541 Ppx/GppA phosphatase family ATOBIA_N04380 PF01761 3-dehydroquinate synthase ATOBIA_N04440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATOBIA_N04440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ATOBIA_N04450 PF00294 pfkB family carbohydrate kinase ATOBIA_N04460 PF00465 Iron-containing alcohol dehydrogenase ATOBIA_N04480 PF02875 Mur ligase family, glutamate ligase domain ATOBIA_N04480 PF08245 Mur ligase middle domain ATOBIA_N04490 PF03725 3' exoribonuclease family, domain 2 ATOBIA_N04490 PF01138 3' exoribonuclease family, domain 1 ATOBIA_N04500 PF01177 Asp/Glu/Hydantoin racemase ATOBIA_N04510 PF01725 Ham1 family ATOBIA_N04520 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ATOBIA_N04530 PF00557 Metallopeptidase family M24 ATOBIA_N04530 PF01321 Creatinase/Prolidase N-terminal domain ATOBIA_N04550 PF08544 GHMP kinases C terminal ATOBIA_N04550 PF00288 GHMP kinases N terminal domain ATOBIA_N04580 PF12705 PD-(D/E)XK nuclease superfamily ATOBIA_N04580 PF13361 UvrD-like helicase C-terminal domain ATOBIA_N04580 PF00580 UvrD/REP helicase N-terminal domain ATOBIA_N04590 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ATOBIA_N04590 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ATOBIA_N04620 PF02554 Carbon starvation protein CstA ATOBIA_N04620 PF13722 5TM C-terminal transporter carbon starvation CstA ATOBIA_N04630 PF02416 mttA/Hcf106 family ATOBIA_N04640 PF03449 Transcription elongation factor, N-terminal ATOBIA_N04640 PF01272 Transcription elongation factor, GreA/GreB, C-term ATOBIA_N04650 PF00152 tRNA synthetases class II (D, K and N) ATOBIA_N04650 PF01336 OB-fold nucleic acid binding domain ATOBIA_N04660 PF00004 ATPase family associated with various cellular activities (AAA) ATOBIA_N04660 PF07724 AAA domain (Cdc48 subfamily) ATOBIA_N04660 PF17871 AAA lid domain ATOBIA_N04660 PF02861 Clp amino terminal domain, pathogenicity island component ATOBIA_N04660 PF10431 C-terminal, D2-small domain, of ClpB protein ATOBIA_N04670 PF00633 Helix-hairpin-helix motif ATOBIA_N04670 PF02457 DisA bacterial checkpoint controller nucleotide-binding ATOBIA_N04670 PF10635 DisA bacterial checkpoint controller linker region ATOBIA_N04680 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ATOBIA_N04690 PF02542 YgbB family ATOBIA_N04700 PF06426 Serine acetyltransferase, N-terminal ATOBIA_N04700 PF00132 Bacterial transferase hexapeptide (six repeats) ATOBIA_N04710 PF09190 DALR domain ATOBIA_N04710 PF01406 tRNA synthetases class I (C) catalytic domain ATOBIA_N04720 PF00588 SpoU rRNA Methylase family ATOBIA_N04720 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATOBIA_N04740 PF00009 Elongation factor Tu GTP binding domain ATOBIA_N04740 PF03144 Elongation factor Tu domain 2 ATOBIA_N04740 PF03143 Elongation factor Tu C-terminal domain ATOBIA_N04750 PF00471 Ribosomal protein L33 ATOBIA_N04770 PF00467 KOW motif ATOBIA_N04770 PF02357 Transcription termination factor nusG ATOBIA_N04780 PF00298 Ribosomal protein L11, RNA binding domain ATOBIA_N04780 PF03946 Ribosomal protein L11, N-terminal domain ATOBIA_N04790 PF00687 Ribosomal protein L1p/L10e family ATOBIA_N04800 PF00466 Ribosomal protein L10 ATOBIA_N04810 PF00542 Ribosomal protein L7/L12 C-terminal domain ATOBIA_N04810 PF16320 Ribosomal protein L7/L12 dimerisation domain ATOBIA_N04820 PF04563 RNA polymerase beta subunit ATOBIA_N04820 PF04565 RNA polymerase Rpb2, domain 3 ATOBIA_N04820 PF10385 RNA polymerase beta subunit external 1 domain ATOBIA_N04820 PF00562 RNA polymerase Rpb2, domain 6 ATOBIA_N04820 PF04560 RNA polymerase Rpb2, domain 7 ATOBIA_N04820 PF04561 RNA polymerase Rpb2, domain 2 ATOBIA_N04830 PF04983 RNA polymerase Rpb1, domain 3 ATOBIA_N04830 PF05000 RNA polymerase Rpb1, domain 4 ATOBIA_N04830 PF04998 RNA polymerase Rpb1, domain 5 ATOBIA_N04830 PF00623 RNA polymerase Rpb1, domain 2 ATOBIA_N04830 PF04997 RNA polymerase Rpb1, domain 1 ATOBIA_N04850 PF00164 Ribosomal protein S12/S23 ATOBIA_N04860 PF00177 Ribosomal protein S7p/S5e ATOBIA_N04870 PF14492 Elongation Factor G, domain II ATOBIA_N04870 PF03764 Elongation factor G, domain IV ATOBIA_N04870 PF00009 Elongation factor Tu GTP binding domain ATOBIA_N04870 PF03144 Elongation factor Tu domain 2 ATOBIA_N04870 PF00679 Elongation factor G C-terminus ATOBIA_N04880 PF00338 Ribosomal protein S10p/S20e ATOBIA_N04900 PF00297 Ribosomal protein L3 ATOBIA_N04910 PF00573 Ribosomal protein L4/L1 family ATOBIA_N04920 PF00276 Ribosomal protein L23 ATOBIA_N04930 PF03947 Ribosomal Proteins L2, C-terminal domain ATOBIA_N04930 PF00181 Ribosomal Proteins L2, RNA binding domain ATOBIA_N04940 PF00203 Ribosomal protein S19 ATOBIA_N04950 PF00237 Ribosomal protein L22p/L17e ATOBIA_N04960 PF00189 Ribosomal protein S3, C-terminal domain ATOBIA_N04960 PF07650 KH domain ATOBIA_N04970 PF00252 Ribosomal protein L16p/L10e ATOBIA_N04980 PF00831 Ribosomal L29 protein ATOBIA_N04990 PF00366 Ribosomal protein S17 ATOBIA_N05000 PF00238 Ribosomal protein L14p/L23e ATOBIA_N05010 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ATOBIA_N05010 PF00467 KOW motif ATOBIA_N05020 PF00673 ribosomal L5P family C-terminus ATOBIA_N05020 PF00281 Ribosomal protein L5 ATOBIA_N05030 PF00253 Ribosomal protein S14p/S29e ATOBIA_N05040 PF00410 Ribosomal protein S8 ATOBIA_N05050 PF00347 Ribosomal protein L6 ATOBIA_N05060 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ATOBIA_N05070 PF00333 Ribosomal protein S5, N-terminal domain ATOBIA_N05070 PF03719 Ribosomal protein S5, C-terminal domain ATOBIA_N05080 PF00327 Ribosomal protein L30p/L7e ATOBIA_N05090 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ATOBIA_N05100 PF00344 SecY translocase ATOBIA_N05110 PF05191 Adenylate kinase, active site lid ATOBIA_N05120 PF00557 Metallopeptidase family M24 ATOBIA_N05130 PF01176 Translation initiation factor 1A / IF-1 ATOBIA_N05140 PF00444 Ribosomal protein L36 ATOBIA_N05150 PF00416 Ribosomal protein S13/S18 ATOBIA_N05160 PF00411 Ribosomal protein S11 ATOBIA_N05170 PF01479 S4 domain ATOBIA_N05170 PF00163 Ribosomal protein S4/S9 N-terminal domain ATOBIA_N05180 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ATOBIA_N05180 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ATOBIA_N05180 PF01000 RNA polymerase Rpb3/RpoA insert domain ATOBIA_N05190 PF01196 Ribosomal protein L17 ATOBIA_N05200 PF02361 Cobalt transport protein ATOBIA_N05200 PF00005 ABC transporter ATOBIA_N05210 PF02361 Cobalt transport protein ATOBIA_N05220 PF01416 tRNA pseudouridine synthase ATOBIA_N05250 PF00535 Glycosyl transferase family 2 ATOBIA_N05260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATOBIA_N05270 PF02913 FAD linked oxidases, C-terminal domain ATOBIA_N05270 PF01565 FAD binding domain ATOBIA_N05280 PF01012 Electron transfer flavoprotein domain ATOBIA_N05290 PF00766 Electron transfer flavoprotein FAD-binding domain ATOBIA_N05290 PF01012 Electron transfer flavoprotein domain ATOBIA_N05300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATOBIA_N05310 PF00156 Phosphoribosyl transferase domain ATOBIA_N05320 PF03749 Sugar fermentation stimulation protein RE domain ATOBIA_N05320 PF17746 SfsA N-terminal OB domain ATOBIA_N05330 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ATOBIA_N05330 PF00970 Oxidoreductase FAD-binding domain ATOBIA_N05330 PF00175 Oxidoreductase NAD-binding domain ATOBIA_N05340 PF13247 4Fe-4S dicluster domain ATOBIA_N05340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ATOBIA_N05340 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATOBIA_N05370 PF01195 Peptidyl-tRNA hydrolase ATOBIA_N05390 PF08220 DeoR-like helix-turn-helix domain ATOBIA_N05390 PF00455 DeoR C terminal sensor domain ATOBIA_N05400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATOBIA_N05400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATOBIA_N05410 PF13580 SIS domain ATOBIA_N05420 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ATOBIA_N05450 PF02378 Phosphotransferase system, EIIC ATOBIA_N05460 PF01869 BadF/BadG/BcrA/BcrD ATPase family ATOBIA_N05470 PF00232 Glycosyl hydrolase family 1 ATOBIA_N05480 PF01418 Helix-turn-helix domain, rpiR family ATOBIA_N05480 PF01380 SIS domain ATOBIA_N05490 PF14572 Phosphoribosyl synthetase-associated domain ATOBIA_N05490 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ATOBIA_N05500 PF00132 Bacterial transferase hexapeptide (six repeats) ATOBIA_N05500 PF12804 MobA-like NTP transferase domain ATOBIA_N05640 PF00436 Single-strand binding protein family ATOBIA_N06070 PF00348 Polyprenyl synthetase ATOBIA_N06080 PF16363 GDP-mannose 4,6 dehydratase ATOBIA_N06100 PF02361 Cobalt transport protein ATOBIA_N06100 PF00005 ABC transporter ATOBIA_N06110 PF00005 ABC transporter ATOBIA_N06120 PF02361 Cobalt transport protein ATOBIA_N06120 PF00005 ABC transporter ATOBIA_N06130 PF12822 ECF transporter, substrate-specific component ATOBIA_N06160 PF01565 FAD binding domain ATOBIA_N06160 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ATOBIA_N06170 PF08240 Alcohol dehydrogenase GroES-like domain ATOBIA_N06170 PF00107 Zinc-binding dehydrogenase ATOBIA_N06180 PF07683 Cobalamin synthesis protein cobW C-terminal domain ATOBIA_N06180 PF02492 CobW/HypB/UreG, nucleotide-binding domain ATOBIA_N06200 PF05167 Uncharacterised ACR (DUF711) ATOBIA_N06210 PF01757 Acyltransferase family ATOBIA_N06220 PF00497 Bacterial extracellular solute-binding proteins, family 3 ATOBIA_N06240 PF01869 BadF/BadG/BcrA/BcrD ATPase family ATOBIA_N06260 PF13439 Glycosyltransferase Family 4 ATOBIA_N06260 PF00534 Glycosyl transferases group 1 ATOBIA_N06290 PF04012 PspA/IM30 family ATOBIA_N06300 PF07687 Peptidase dimerisation domain ATOBIA_N06300 PF01546 Peptidase family M20/M25/M40 ATOBIA_N06370 PF05816 Toxic anion resistance protein (TelA) ATOBIA_N06380 PF13419 Haloacid dehalogenase-like hydrolase ATOBIA_N06390 PF11799 impB/mucB/samB family C-terminal domain ATOBIA_N06390 PF00817 impB/mucB/samB family ATOBIA_N06390 PF11798 IMS family HHH motif ATOBIA_N06410 PF01791 DeoC/LacD family aldolase ATOBIA_N06470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATOBIA_N06470 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATOBIA_N06470 PF02142 MGS-like domain ATOBIA_N06480 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ATOBIA_N06480 PF00117 Glutamine amidotransferase class-I ATOBIA_N06490 PF00491 Arginase family ATOBIA_N06520 PF16736 Single Cache-like ATOBIA_N06520 PF00989 PAS fold ATOBIA_N06520 PF00512 His Kinase A (phospho-acceptor) domain ATOBIA_N06520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATOBIA_N06530 PF00486 Transcriptional regulatory protein, C terminal ATOBIA_N06530 PF00072 Response regulator receiver domain ATOBIA_N06540 PF00005 ABC transporter ATOBIA_N06550 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N06560 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N06570 PF12849 PBP superfamily domain ATOBIA_N06590 PF13732 Domain of unknown function (DUF4162) ATOBIA_N06590 PF00005 ABC transporter ATOBIA_N06610 PF00311 Phosphoenolpyruvate carboxylase ATOBIA_N06620 PF01266 FAD dependent oxidoreductase ATOBIA_N06630 PF04324 BFD-like [2Fe-2S] binding domain ATOBIA_N06630 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATOBIA_N06650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATOBIA_N06650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATOBIA_N06700 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family ATOBIA_N06710 PF01156 Inosine-uridine preferring nucleoside hydrolase ATOBIA_N06720 PF00106 short chain dehydrogenase ATOBIA_N06730 PF00543 Nitrogen regulatory protein P-II ATOBIA_N06740 PF00909 Ammonium Transporter Family ATOBIA_N06750 PF00258 Flavodoxin ATOBIA_N06780 PF00708 Acylphosphatase ATOBIA_N06790 PF00005 ABC transporter ATOBIA_N06810 PF02645 Uncharacterised protein, DegV family COG1307 ATOBIA_N06850 PF01242 6-pyruvoyl tetrahydropterin synthase ATOBIA_N06870 PF00535 Glycosyl transferase family 2 ATOBIA_N06900 PF00285 Citrate synthase, C-terminal domain ATOBIA_N06960 PF00072 Response regulator receiver domain ATOBIA_N06960 PF00486 Transcriptional regulatory protein, C terminal ATOBIA_N06970 PF00072 Response regulator receiver domain ATOBIA_N06970 PF00486 Transcriptional regulatory protein, C terminal ATOBIA_N06990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATOBIA_N06990 PF00512 His Kinase A (phospho-acceptor) domain ATOBIA_N07000 PF02705 K+ potassium transporter ATOBIA_N07030 PF10672 S-adenosylmethionine-dependent methyltransferase ATOBIA_N07030 PF01170 Putative RNA methylase family UPF0020 ATOBIA_N07030 PF02926 THUMP domain ATOBIA_N07040 PF00291 Pyridoxal-phosphate dependent enzyme ATOBIA_N07050 PF01926 50S ribosome-binding GTPase ATOBIA_N07060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATOBIA_N07060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATOBIA_N07060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATOBIA_N07060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATOBIA_N07080 PF01316 Arginine repressor, DNA binding domain ATOBIA_N07080 PF02863 Arginine repressor, C-terminal domain ATOBIA_N07090 PF00764 Arginosuccinate synthase ATOBIA_N07100 PF14698 Argininosuccinate lyase C-terminal ATOBIA_N07100 PF00206 Lyase ATOBIA_N07110 PF00905 Penicillin binding protein transpeptidase domain ATOBIA_N07110 PF00912 Transglycosylase ATOBIA_N07120 PF01520 N-acetylmuramoyl-L-alanine amidase ATOBIA_N07120 PF11741 AMIN domain ATOBIA_N07130 PF01479 S4 domain ATOBIA_N07130 PF00579 tRNA synthetases class I (W and Y) ATOBIA_N07140 PF01136 Peptidase family U32 ATOBIA_N07140 PF16325 Peptidase family U32 C-terminal domain ATOBIA_N07150 PF01106 NifU-like domain ATOBIA_N07170 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) ATOBIA_N07190 PF01790 Prolipoprotein diacylglyceryl transferase ATOBIA_N07230 PF08239 Bacterial SH3 domain ATOBIA_N07230 PF01476 LysM domain ATOBIA_N07230 PF00877 NlpC/P60 family ATOBIA_N07250 PF01541 GIY-YIG catalytic domain ATOBIA_N07250 PF08459 UvrC Helix-hairpin-helix N-terminal ATOBIA_N07250 PF02151 UvrB/uvrC motif ATOBIA_N07260 PF03668 P-loop ATPase protein family ATOBIA_N07270 PF02650 WhiA C-terminal HTH domain ATOBIA_N07270 PF10298 WhiA N-terminal LAGLIDADG-like domain ATOBIA_N07270 PF14527 WhiA LAGLIDADG-like domain ATOBIA_N07280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATOBIA_N07280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ATOBIA_N07290 PF00162 Phosphoglycerate kinase ATOBIA_N07300 PF00121 Triosephosphate isomerase ATOBIA_N07310 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ATOBIA_N07310 PF01676 Metalloenzyme superfamily ATOBIA_N07320 PF03840 Preprotein translocase SecG subunit ATOBIA_N07330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATOBIA_N07340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATOBIA_N07350 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N07360 PF12911 N-terminal TM domain of oligopeptide transport permease C ATOBIA_N07360 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N07370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATOBIA_N07370 PF00005 ABC transporter ATOBIA_N07380 PF00005 ABC transporter ATOBIA_N07380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATOBIA_N07400 PF02421 Ferrous iron transport protein B ATOBIA_N07400 PF17910 FeoB cytosolic helical domain ATOBIA_N07400 PF07664 Ferrous iron transport protein B C terminus ATOBIA_N07400 PF07670 Nucleoside recognition ATOBIA_N07420 PF01545 Cation efflux family ATOBIA_N07420 PF16916 Dimerisation domain of Zinc Transporter ATOBIA_N07460 PF03313 Serine dehydratase alpha chain ATOBIA_N07470 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATOBIA_N07480 PF01061 ABC-2 type transporter ATOBIA_N07490 PF01061 ABC-2 type transporter ATOBIA_N07500 PF02773 S-adenosylmethionine synthetase, C-terminal domain ATOBIA_N07500 PF02772 S-adenosylmethionine synthetase, central domain ATOBIA_N07500 PF00438 S-adenosylmethionine synthetase, N-terminal domain ATOBIA_N07510 PF04851 Type III restriction enzyme, res subunit ATOBIA_N07510 PF00271 Helicase conserved C-terminal domain ATOBIA_N07510 PF17764 3′ DNA-binding domain (3′BD) ATOBIA_N07510 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ATOBIA_N07510 PF18074 Primosomal protein N C-terminal domain ATOBIA_N07520 PF00248 Aldo/keto reductase family ATOBIA_N07530 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system ATOBIA_N07550 PF02796 Helix-turn-helix domain of resolvase ATOBIA_N07550 PF00239 Resolvase, N terminal domain ATOBIA_N07610 PF12008 Type I restriction and modification enzyme - subunit R C terminal ATOBIA_N07610 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ATOBIA_N07610 PF18766 SWI2/SNF2 ATPase ATOBIA_N07620 PF02384 N-6 DNA Methylase ATOBIA_N07620 PF12161 HsdM N-terminal domain ATOBIA_N07670 PF14659 Phage integrase, N-terminal SAM-like domain ATOBIA_N07670 PF00589 Phage integrase family ATOBIA_N07680 PF03389 MobA/MobL family ATOBIA_N07730 PF13662 Toprim domain ATOBIA_N07730 PF08275 DNA primase catalytic core, N-terminal domain ATOBIA_N07730 PF01807 CHC2 zinc finger ATOBIA_N07760 PF01327 Polypeptide deformylase ATOBIA_N07770 PF02911 Formyl transferase, C-terminal domain ATOBIA_N07770 PF00551 Formyl transferase ATOBIA_N07780 PF01189 16S rRNA methyltransferase RsmB/F ATOBIA_N07780 PF01029 NusB family ATOBIA_N07800 PF13419 Haloacid dehalogenase-like hydrolase ATOBIA_N07830 PF00005 ABC transporter ATOBIA_N07830 PF12848 ABC transporter ATOBIA_N07850 PF02163 Peptidase family M50 ATOBIA_N07860 PF02616 Segregation and condensation protein ScpA ATOBIA_N07870 PF04079 Segregation and condensation complex subunit ScpB ATOBIA_N07880 PF01479 S4 domain ATOBIA_N07880 PF00849 RNA pseudouridylate synthase ATOBIA_N07890 PF00300 Histidine phosphatase superfamily (branch 1) ATOBIA_N07900 PF02224 Cytidylate kinase ATOBIA_N07910 PF02401 LytB protein ATOBIA_N07920 PF17820 PDZ domain ATOBIA_N07920 PF02163 Peptidase family M50 ATOBIA_N07930 PF01926 50S ribosome-binding GTPase ATOBIA_N07930 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ATOBIA_N07940 PF02660 Glycerol-3-phosphate acyltransferase ATOBIA_N07950 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ATOBIA_N07950 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ATOBIA_N07960 PF00834 Ribulose-phosphate 3 epimerase family ATOBIA_N07970 PF00266 Aminotransferase class-V ATOBIA_N07990 PF01784 NIF3 (NGG1p interacting factor 3) ATOBIA_N08010 PF02441 Flavoprotein ATOBIA_N08010 PF04127 DNA / pantothenate metabolism flavoprotein ATOBIA_N08020 PF01261 Xylose isomerase-like TIM barrel ATOBIA_N08030 PF00005 ABC transporter ATOBIA_N08030 PF16326 ABC transporter C-terminal domain ATOBIA_N08030 PF12848 ABC transporter ATOBIA_N08040 PF00664 ABC transporter transmembrane region ATOBIA_N08040 PF00005 ABC transporter ATOBIA_N08050 PF00005 ABC transporter ATOBIA_N08050 PF00664 ABC transporter transmembrane region ATOBIA_N08070 PF00857 Isochorismatase family ATOBIA_N08090 PF03641 Possible lysine decarboxylase ATOBIA_N08120 PF01470 Pyroglutamyl peptidase ATOBIA_N08150 PF00830 Ribosomal L28 family ATOBIA_N08180 PF00664 ABC transporter transmembrane region ATOBIA_N08180 PF00005 ABC transporter ATOBIA_N08190 PF00664 ABC transporter transmembrane region ATOBIA_N08190 PF00005 ABC transporter ATOBIA_N08200 PF03780 Asp23 family, cell envelope-related function ATOBIA_N08210 PF02734 DAK2 domain ATOBIA_N08210 PF13684 Dihydroxyacetone kinase family ATOBIA_N08220 PF00271 Helicase conserved C-terminal domain ATOBIA_N08220 PF00270 DEAD/DEAH box helicase ATOBIA_N08220 PF17191 RecG wedge domain ATOBIA_N08240 PF01467 Cytidylyltransferase-like ATOBIA_N08270 PF01783 Ribosomal L32p protein family ATOBIA_N08280 PF02504 Fatty acid synthesis protein ATOBIA_N08290 PF00550 Phosphopantetheine attachment site ATOBIA_N08300 PF14622 Ribonuclease-III-like ATOBIA_N08300 PF00035 Double-stranded RNA binding motif ATOBIA_N08310 PF06470 SMC proteins Flexible Hinge Domain ATOBIA_N08310 PF02463 RecF/RecN/SMC N terminal domain ATOBIA_N08320 PF00448 SRP54-type protein, GTPase domain ATOBIA_N08320 PF02881 SRP54-type protein, helical bundle domain ATOBIA_N08330 PF02978 Signal peptide binding domain ATOBIA_N08330 PF02881 SRP54-type protein, helical bundle domain ATOBIA_N08330 PF00448 SRP54-type protein, GTPase domain ATOBIA_N08400 PF00588 SpoU rRNA Methylase family ATOBIA_N08410 PF00004 ATPase family associated with various cellular activities (AAA) ATOBIA_N08410 PF17862 AAA+ lid domain ATOBIA_N08410 PF06480 FtsH Extracellular ATOBIA_N08410 PF01434 Peptidase family M41 ATOBIA_N08420 PF06874 Firmicute fructose-1,6-bisphosphatase ATOBIA_N08430 PF06827 Zinc finger found in FPG and IleRS ATOBIA_N08430 PF08264 Anticodon-binding domain of tRNA ATOBIA_N08430 PF00133 tRNA synthetases class I (I, L, M and V) ATOBIA_N08440 PF01252 Signal peptidase (SPase) II ATOBIA_N08450 PF01479 S4 domain ATOBIA_N08450 PF00849 RNA pseudouridylate synthase ATOBIA_N08470 PF00478 IMP dehydrogenase / GMP reductase domain ATOBIA_N08470 PF00571 CBS domain ATOBIA_N08480 PF13603 Leucyl-tRNA synthetase, Domain 2 ATOBIA_N08480 PF00133 tRNA synthetases class I (I, L, M and V) ATOBIA_N08480 PF08264 Anticodon-binding domain of tRNA ATOBIA_N08500 PF17384 RimP C-terminal SH3 domain ATOBIA_N08500 PF02576 RimP N-terminal domain ATOBIA_N08510 PF00575 S1 RNA binding domain ATOBIA_N08510 PF08529 NusA N-terminal domain ATOBIA_N08510 PF13184 NusA-like KH domain ATOBIA_N08520 PF04760 Translation initiation factor IF-2, N-terminal region ATOBIA_N08520 PF11987 Translation-initiation factor 2 ATOBIA_N08520 PF00009 Elongation factor Tu GTP binding domain ATOBIA_N08530 PF02033 Ribosome-binding factor A ATOBIA_N08550 PF09142 tRNA Pseudouridine synthase II, C terminal ATOBIA_N08550 PF01509 TruB family pseudouridylate synthase (N terminal domain) ATOBIA_N08550 PF16198 tRNA pseudouridylate synthase B C-terminal domain ATOBIA_N08560 PF01687 Riboflavin kinase ATOBIA_N08560 PF06574 FAD synthetase ATOBIA_N08570 PF13662 Toprim domain ATOBIA_N08570 PF01807 CHC2 zinc finger ATOBIA_N08570 PF08275 DNA primase catalytic core, N-terminal domain ATOBIA_N08570 PF08278 DNA primase DnaG DnaB-binding ATOBIA_N08570 PF10410 DnaB-helicase binding domain of primase ATOBIA_N08580 PF04545 Sigma-70, region 4 ATOBIA_N08580 PF04539 Sigma-70 region 3 ATOBIA_N08580 PF04542 Sigma-70 region 2 ATOBIA_N08580 PF00140 Sigma-70 factor, region 1.2 ATOBIA_N08580 PF03979 Sigma-70 factor, region 1.1 ATOBIA_N08600 PF00005 ABC transporter ATOBIA_N08610 PF00535 Glycosyl transferase family 2 ATOBIA_N08610 PF01501 Glycosyl transferase family 8 ATOBIA_N08620 PF00535 Glycosyl transferase family 2 ATOBIA_N08640 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N08650 PF08402 TOBE domain ATOBIA_N08650 PF00005 ABC transporter ATOBIA_N08660 PF00535 Glycosyl transferase family 2 ATOBIA_N08670 PF00156 Phosphoribosyl transferase domain ATOBIA_N08680 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATOBIA_N08680 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATOBIA_N08690 PF01979 Amidohydrolase family ATOBIA_N08700 PF00175 Oxidoreductase NAD-binding domain ATOBIA_N08700 PF00970 Oxidoreductase FAD-binding domain ATOBIA_N08700 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ATOBIA_N08710 PF01180 Dihydroorotate dehydrogenase ATOBIA_N08720 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ATOBIA_N08730 PF00156 Phosphoribosyl transferase domain ATOBIA_N08750 PF00625 Guanylate kinase ATOBIA_N08770 PF02926 THUMP domain ATOBIA_N08770 PF02568 Thiamine biosynthesis protein (ThiI) ATOBIA_N08780 PF10531 SLBB domain ATOBIA_N08800 PF03099 Biotin/lipoate A/B protein ligase family ATOBIA_N08800 PF12706 Beta-lactamase superfamily domain ATOBIA_N08820 PF01066 CDP-alcohol phosphatidyltransferase ATOBIA_N08830 PF07943 Penicillin-binding protein 5, C-terminal domain ATOBIA_N08830 PF00768 D-alanyl-D-alanine carboxypeptidase ATOBIA_N08850 PF00155 Aminotransferase class I and II ATOBIA_N08860 PF01042 Endoribonuclease L-PSP ATOBIA_N08880 PF00376 MerR family regulatory protein ATOBIA_N08890 PF00156 Phosphoribosyl transferase domain ATOBIA_N08900 PF01594 AI-2E family transporter ATOBIA_N08910 PF00465 Iron-containing alcohol dehydrogenase ATOBIA_N08920 PF03306 Alpha-acetolactate decarboxylase ATOBIA_N08930 PF03812 2-keto-3-deoxygluconate permease ATOBIA_N08960 PF00890 FAD binding domain ATOBIA_N08960 PF02910 Fumarate reductase flavoprotein C-term ATOBIA_N08970 PF01238 Phosphomannose isomerase type I ATOBIA_N08980 PF07702 UTRA domain ATOBIA_N08980 PF00392 Bacterial regulatory proteins, gntR family ATOBIA_N08990 PF00654 Voltage gated chloride channel ATOBIA_N09000 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATOBIA_N09010 PF00710 Asparaginase, N-terminal ATOBIA_N09010 PF17763 Glutaminase/Asparaginase C-terminal domain ATOBIA_N09020 PF01048 Phosphorylase superfamily ATOBIA_N09040 PF02664 S-Ribosylhomocysteinase (LuxS) ATOBIA_N09070 PF00535 Glycosyl transferase family 2 ATOBIA_N09080 PF00005 ABC transporter ATOBIA_N09090 PF09084 NMT1/THI5 like ATOBIA_N09100 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N09120 PF07687 Peptidase dimerisation domain ATOBIA_N09120 PF01546 Peptidase family M20/M25/M40 ATOBIA_N09130 PF07685 CobB/CobQ-like glutamine amidotransferase domain ATOBIA_N09140 PF08353 Domain of unknown function (DUF1727) ATOBIA_N09140 PF08245 Mur ligase middle domain ATOBIA_N09180 PF01709 Transcriptional regulator ATOBIA_N09210 PF00005 ABC transporter ATOBIA_N09230 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain ATOBIA_N09230 PF00877 NlpC/P60 family ATOBIA_N09260 PF12627 Probable RNA and SrmB- binding site of polymerase A ATOBIA_N09260 PF13735 tRNA nucleotidyltransferase domain 2 putative ATOBIA_N09260 PF01743 Poly A polymerase head domain ATOBIA_N09280 PF03051 Peptidase C1-like family ATOBIA_N09310 PF09186 Domain of unknown function (DUF1949) ATOBIA_N09310 PF01205 Uncharacterized protein family UPF0029 ATOBIA_N09350 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ATOBIA_N09360 PF00480 ROK family ATOBIA_N09370 PF00701 Dihydrodipicolinate synthetase family ATOBIA_N09380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATOBIA_N09380 PF00005 ABC transporter ATOBIA_N09390 PF00005 ABC transporter ATOBIA_N09390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATOBIA_N09400 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N09410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATOBIA_N09430 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ATOBIA_N09440 PF01502 Phosphoribosyl-AMP cyclohydrolase ATOBIA_N09450 PF00977 Histidine biosynthesis protein ATOBIA_N09460 PF00977 Histidine biosynthesis protein ATOBIA_N09470 PF00117 Glutamine amidotransferase class-I ATOBIA_N09480 PF00475 Imidazoleglycerol-phosphate dehydratase ATOBIA_N09490 PF00155 Aminotransferase class I and II ATOBIA_N09500 PF00815 Histidinol dehydrogenase ATOBIA_N09510 PF01634 ATP phosphoribosyltransferase ATOBIA_N09520 PF00005 ABC transporter ATOBIA_N09530 PF12399 Branched-chain amino acid ATP-binding cassette transporter ATOBIA_N09530 PF00005 ABC transporter ATOBIA_N09540 PF11862 Domain of unknown function (DUF3382) ATOBIA_N09540 PF02653 Branched-chain amino acid transport system / permease component ATOBIA_N09550 PF02653 Branched-chain amino acid transport system / permease component ATOBIA_N09570 PF03023 Lipid II flippase MurJ ATOBIA_N09580 PF04073 Aminoacyl-tRNA editing domain ATOBIA_N09590 PF00005 ABC transporter ATOBIA_N09590 PF17755 UvrA DNA-binding domain ATOBIA_N09590 PF17760 UvrA interaction domain ATOBIA_N09620 PF10609 NUBPL iron-transfer P-loop NTPase ATOBIA_N09660 PF00271 Helicase conserved C-terminal domain ATOBIA_N09660 PF04851 Type III restriction enzyme, res subunit ATOBIA_N09660 PF02151 UvrB/uvrC motif ATOBIA_N09660 PF12344 Ultra-violet resistance protein B ATOBIA_N09660 PF17757 UvrB interaction domain ATOBIA_N09670 PF01551 Peptidase family M23 ATOBIA_N09670 PF10145 Phage-related minor tail protein ATOBIA_N09670 PF01464 Transglycosylase SLT domain ATOBIA_N09680 PF01121 Dephospho-CoA kinase ATOBIA_N09710 PF07687 Peptidase dimerisation domain ATOBIA_N09710 PF01546 Peptidase family M20/M25/M40 ATOBIA_N09720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATOBIA_N09730 PF00005 ABC transporter ATOBIA_N09730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATOBIA_N09740 PF00005 ABC transporter ATOBIA_N09740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATOBIA_N09750 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N09750 PF12911 N-terminal TM domain of oligopeptide transport permease C ATOBIA_N09760 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N09770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATOBIA_N09780 PF00575 S1 RNA binding domain ATOBIA_N09790 PF00356 Bacterial regulatory proteins, lacI family ATOBIA_N09800 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ATOBIA_N09820 PF00075 RNase H ATOBIA_N09830 PF00664 ABC transporter transmembrane region ATOBIA_N09830 PF00005 ABC transporter ATOBIA_N09840 PF02127 Aminopeptidase I zinc metalloprotease (M18) ATOBIA_N09850 PF07724 AAA domain (Cdc48 subfamily) ATOBIA_N09850 PF10431 C-terminal, D2-small domain, of ClpB protein ATOBIA_N09850 PF06689 ClpX C4-type zinc finger ATOBIA_N09860 PF00574 Clp protease ATOBIA_N09870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATOBIA_N09870 PF05698 Bacterial trigger factor protein (TF) C-terminus ATOBIA_N09870 PF05697 Bacterial trigger factor protein (TF) ATOBIA_N09920 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATOBIA_N09920 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ATOBIA_N09930 PF00781 Diacylglycerol kinase catalytic domain ATOBIA_N09940 PF02397 Bacterial sugar transferase ATOBIA_N09950 PF00391 PEP-utilising enzyme, mobile domain ATOBIA_N09950 PF05524 PEP-utilising enzyme, N-terminal ATOBIA_N09950 PF02896 PEP-utilising enzyme, TIM barrel domain ATOBIA_N09960 PF00381 PTS HPr component phosphorylation site ATOBIA_N09970 PF00294 pfkB family carbohydrate kinase ATOBIA_N09980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATOBIA_N09990 PF01367 5'-3' exonuclease, C-terminal SAM fold ATOBIA_N09990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATOBIA_N09990 PF00476 DNA polymerase family A ATOBIA_N10000 PF00120 Glutamine synthetase, catalytic domain ATOBIA_N10000 PF18318 Glutamine synthetase C-terminal domain ATOBIA_N10000 PF12437 Glutamine synthetase type III N terminal ATOBIA_N10020 PF02653 Branched-chain amino acid transport system / permease component ATOBIA_N10030 PF00005 ABC transporter ATOBIA_N10040 PF02652 L-lactate permease ATOBIA_N10060 PF02659 Putative manganese efflux pump ATOBIA_N10070 PF11700 Vacuole effluxer Atg22 like ATOBIA_N10100 PF08774 VRR-NUC domain ATOBIA_N10100 PF04851 Type III restriction enzyme, res subunit ATOBIA_N10110 PF01555 DNA methylase ATOBIA_N10110 PF18273 Type III R-M EcoP15I C-terminal domain ATOBIA_N10150 PF00155 Aminotransferase class I and II ATOBIA_N10160 PF13350 Tyrosine phosphatase family ATOBIA_N10180 PF00860 Permease family ATOBIA_N10190 PF00860 Permease family ATOBIA_N10200 PF00692 dUTPase ATOBIA_N10210 PF03477 ATP cone domain ATOBIA_N10220 PF00717 Peptidase S24-like ATOBIA_N10220 PF01726 LexA DNA binding domain ATOBIA_N10240 PF01926 50S ribosome-binding GTPase ATOBIA_N10240 PF13167 GTP-binding GTPase N-terminal ATOBIA_N10240 PF16360 GTP-binding GTPase Middle Region ATOBIA_N10260 PF00919 Uncharacterized protein family UPF0004 ATOBIA_N10260 PF01938 TRAM domain ATOBIA_N10260 PF04055 Radical SAM superfamily ATOBIA_N10270 PF04232 Stage V sporulation protein S (SpoVS) ATOBIA_N10290 PF00013 KH domain ATOBIA_N10290 PF01966 HD domain ATOBIA_N10290 PF12072 Domain of unknown function (DUF3552) ATOBIA_N10300 PF02631 RecX family ATOBIA_N10310 PF00154 recA bacterial DNA recombination protein ATOBIA_N10320 PF02464 Competence-damaged protein ATOBIA_N10320 PF18146 Damage-inducible protein CinA KH domain ATOBIA_N10320 PF00994 Probable molybdopterin binding domain ATOBIA_N10330 PF01066 CDP-alcohol phosphatidyltransferase ATOBIA_N10340 PF04055 Radical SAM superfamily ATOBIA_N10340 PF18693 TRAM domain ATOBIA_N10340 PF00919 Uncharacterized protein family UPF0004 ATOBIA_N10350 PF04461 Protein of unknown function (DUF520) ATOBIA_N10370 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ATOBIA_N10370 PF17854 FtsK alpha domain ATOBIA_N10370 PF09397 Ftsk gamma domain ATOBIA_N10370 PF01580 FtsK/SpoIIIE family ATOBIA_N10380 PF17770 Ribonuclease J C-terminal domain ATOBIA_N10380 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ATOBIA_N10380 PF00753 Metallo-beta-lactamase superfamily ATOBIA_N10390 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ATOBIA_N10390 PF01138 3' exoribonuclease family, domain 1 ATOBIA_N10390 PF03725 3' exoribonuclease family, domain 2 ATOBIA_N10390 PF00575 S1 RNA binding domain ATOBIA_N10390 PF00013 KH domain ATOBIA_N10400 PF00312 Ribosomal protein S15 ATOBIA_N10410 PF02565 Recombination protein O C terminal ATOBIA_N10410 PF11967 Recombination protein O N terminal ATOBIA_N10420 PF07650 KH domain ATOBIA_N10420 PF01926 50S ribosome-binding GTPase ATOBIA_N10430 PF01219 Prokaryotic diacylglycerol kinase ATOBIA_N10440 PF02130 Uncharacterized protein family UPF0054 ATOBIA_N10450 PF02562 PhoH-like protein ATOBIA_N10460 PF00919 Uncharacterized protein family UPF0004 ATOBIA_N10460 PF04055 Radical SAM superfamily ATOBIA_N10470 PF00226 DnaJ domain ATOBIA_N10470 PF01556 DnaJ C terminal domain ATOBIA_N10470 PF00684 DnaJ central domain ATOBIA_N10480 PF00226 DnaJ domain ATOBIA_N10480 PF00684 DnaJ central domain ATOBIA_N10480 PF01556 DnaJ C terminal domain ATOBIA_N10490 PF00255 Glutathione peroxidase ATOBIA_N10580 PF04055 Radical SAM superfamily ATOBIA_N10580 PF06969 HemN C-terminal domain ATOBIA_N10590 PF01207 Dihydrouridine synthase (Dus) ATOBIA_N10600 PF00679 Elongation factor G C-terminus ATOBIA_N10600 PF00009 Elongation factor Tu GTP binding domain ATOBIA_N10600 PF03144 Elongation factor Tu domain 2 ATOBIA_N10600 PF06421 GTP-binding protein LepA C-terminus ATOBIA_N10610 PF01649 Ribosomal protein S20 ATOBIA_N10670 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ATOBIA_N10670 PF02779 Transketolase, pyrimidine binding domain ATOBIA_N10670 PF02780 Transketolase, C-terminal domain ATOBIA_N10730 PF03129 Anticodon binding domain ATOBIA_N10730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATOBIA_N10730 PF04073 Aminoacyl-tRNA editing domain ATOBIA_N10740 PF04551 GcpE protein ATOBIA_N10750 PF02163 Peptidase family M50 ATOBIA_N10750 PF17820 PDZ domain ATOBIA_N10760 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ATOBIA_N10760 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ATOBIA_N10760 PF13288 DXP reductoisomerase C-terminal domain ATOBIA_N10780 PF01255 Putative undecaprenyl diphosphate synthase ATOBIA_N10790 PF01765 Ribosome recycling factor ATOBIA_N10800 PF00696 Amino acid kinase family ATOBIA_N10810 PF00889 Elongation factor TS ATOBIA_N10820 PF00318 Ribosomal protein S2 ATOBIA_N10830 PF02899 Phage integrase, N-terminal SAM-like domain ATOBIA_N10830 PF00589 Phage integrase family ATOBIA_N10840 PF01134 Glucose inhibited division protein A ATOBIA_N10860 PF01078 Magnesium chelatase, subunit ChlI ATOBIA_N10860 PF13335 Magnesium chelatase, subunit ChlI C-terminal ATOBIA_N10870 PF02021 Uncharacterised protein family UPF0102 ATOBIA_N10880 PF01351 Ribonuclease HII ATOBIA_N10890 PF01245 Ribosomal protein L19 ATOBIA_N10900 PF00391 PEP-utilising enzyme, mobile domain ATOBIA_N10900 PF02896 PEP-utilising enzyme, TIM barrel domain ATOBIA_N10900 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ATOBIA_N10910 PF03618 Kinase/pyrophosphorylase ATOBIA_N10920 PF05746 DALR anticodon binding domain ATOBIA_N10920 PF02092 Glycyl-tRNA synthetase beta subunit ATOBIA_N10930 PF02091 Glycyl-tRNA synthetase alpha subunit ATOBIA_N10940 PF10502 Signal peptidase, peptidase S26 ATOBIA_N10950 PF01746 tRNA (Guanine-1)-methyltransferase ATOBIA_N10980 PF00886 Ribosomal protein S16 ATOBIA_N10990 PF00486 Transcriptional regulatory protein, C terminal ATOBIA_N10990 PF00072 Response regulator receiver domain ATOBIA_N11010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATOBIA_N11010 PF13426 PAS domain ATOBIA_N11010 PF00672 HAMP domain ATOBIA_N11010 PF00512 His Kinase A (phospho-acceptor) domain ATOBIA_N11020 PF00817 impB/mucB/samB family ATOBIA_N11020 PF11799 impB/mucB/samB family C-terminal domain ATOBIA_N11050 PF01467 Cytidylyltransferase-like ATOBIA_N11060 PF00171 Aldehyde dehydrogenase family ATOBIA_N11070 PF00696 Amino acid kinase family ATOBIA_N11070 PF01472 PUA domain ATOBIA_N11080 PF09269 Domain of unknown function (DUF1967) ATOBIA_N11080 PF01018 GTP1/OBG ATOBIA_N11080 PF01926 50S ribosome-binding GTPase ATOBIA_N11090 PF01016 Ribosomal L27 protein ATOBIA_N11100 PF00829 Ribosomal prokaryotic L21 protein ATOBIA_N11140 PF01098 Cell cycle protein ATOBIA_N11150 PF03717 Penicillin-binding Protein dimerisation domain ATOBIA_N11150 PF00905 Penicillin binding protein transpeptidase domain ATOBIA_N11170 PF04085 rod shape-determining protein MreC ATOBIA_N11200 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ATOBIA_N11220 PF00330 Aconitase family (aconitate hydratase) ATOBIA_N11220 PF00694 Aconitase C-terminal domain ATOBIA_N11240 PF18152 DAHP synthase ferredoxin-like domain ATOBIA_N11240 PF00793 DAHP synthetase I family ATOBIA_N11250 PF02153 Prephenate dehydrogenase ATOBIA_N11260 PF01761 3-dehydroquinate synthase ATOBIA_N11270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATOBIA_N11280 PF01264 Chorismate synthase ATOBIA_N11290 PF00800 Prephenate dehydratase ATOBIA_N11290 PF01817 Chorismate mutase type II ATOBIA_N11300 PF08501 Shikimate dehydrogenase substrate binding domain ATOBIA_N11310 PF01220 Dehydroquinase class II ATOBIA_N11350 PF03477 ATP cone domain ATOBIA_N11350 PF13597 Anaerobic ribonucleoside-triphosphate reductase ATOBIA_N11360 PF00579 tRNA synthetases class I (W and Y) ATOBIA_N11370 PF03606 C4-dicarboxylate anaerobic carrier ATOBIA_N11380 PF00155 Aminotransferase class I and II ATOBIA_N11390 PF13520 Amino acid permease ATOBIA_N11400 PF13520 Amino acid permease ATOBIA_N11410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATOBIA_N11410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATOBIA_N11430 PF02503 Polyphosphate kinase middle domain ATOBIA_N11430 PF13090 Polyphosphate kinase C-terminal domain 2 ATOBIA_N11430 PF17941 Polyphosphate kinase C-terminal domain 1 ATOBIA_N11430 PF13089 Polyphosphate kinase N-terminal domain ATOBIA_N11440 PF01938 TRAM domain ATOBIA_N11440 PF05958 tRNA (Uracil-5-)-methyltransferase ATOBIA_N11450 PF03576 Peptidase family S58 ATOBIA_N11460 PF02545 Maf-like protein ATOBIA_N11490 PF00535 Glycosyl transferase family 2 ATOBIA_N11500 PF03275 UDP-galactopyranose mutase ATOBIA_N11510 PF01515 Phosphate acetyl/butaryl transferase ATOBIA_N11520 PF01293 Phosphoenolpyruvate carboxykinase ATOBIA_N11540 PF00005 ABC transporter ATOBIA_N11560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATOBIA_N11560 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATOBIA_N11580 PF01238 Phosphomannose isomerase type I ATOBIA_N11590 PF00392 Bacterial regulatory proteins, gntR family ATOBIA_N11590 PF07702 UTRA domain ATOBIA_N11600 PF00871 Acetokinase family ATOBIA_N11620 PF01230 HIT domain ATOBIA_N11630 PF02609 Exonuclease VII small subunit ATOBIA_N11640 PF13742 OB-fold nucleic acid binding domain ATOBIA_N11640 PF02601 Exonuclease VII, large subunit ATOBIA_N11650 PF04298 Putative neutral zinc metallopeptidase ATOBIA_N11660 PF01612 3'-5' exonuclease ATOBIA_N11660 PF00570 HRDC domain ATOBIA_N11680 PF00483 Nucleotidyl transferase ATOBIA_N11690 PF00881 Nitroreductase family ATOBIA_N11700 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ATOBIA_N11700 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ATOBIA_N11750 PF02325 YGGT family ATOBIA_N11760 PF03807 NADP oxidoreductase coenzyme F420-dependent ATOBIA_N11760 PF14748 Pyrroline-5-carboxylate reductase dimerisation ATOBIA_N11770 PF04472 Cell division protein SepF ATOBIA_N11780 PF01168 Alanine racemase, N-terminal domain ATOBIA_N11790 PF01895 PhoU domain ATOBIA_N11800 PF00005 ABC transporter ATOBIA_N11810 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N11820 PF12849 PBP superfamily domain ATOBIA_N11830 PF02578 Multi-copper polyphenol oxidoreductase laccase ATOBIA_N11840 PF12327 FtsZ family, C-terminal domain ATOBIA_N11840 PF00091 Tubulin/FtsZ family, GTPase domain ATOBIA_N11860 PF01565 FAD binding domain ATOBIA_N11860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ATOBIA_N11870 PF01225 Mur ligase family, catalytic domain ATOBIA_N11870 PF02875 Mur ligase family, glutamate ligase domain ATOBIA_N11870 PF08245 Mur ligase middle domain ATOBIA_N11880 PF04101 Glycosyltransferase family 28 C-terminal domain ATOBIA_N11880 PF03033 Glycosyltransferase family 28 N-terminal domain ATOBIA_N11890 PF01098 Cell cycle protein ATOBIA_N11900 PF02875 Mur ligase family, glutamate ligase domain ATOBIA_N11900 PF08245 Mur ligase middle domain ATOBIA_N11910 PF00953 Glycosyl transferase family 4 ATOBIA_N11910 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ATOBIA_N11920 PF01225 Mur ligase family, catalytic domain ATOBIA_N11920 PF08245 Mur ligase middle domain ATOBIA_N11920 PF02875 Mur ligase family, glutamate ligase domain ATOBIA_N11930 PF03717 Penicillin-binding Protein dimerisation domain ATOBIA_N11930 PF00905 Penicillin binding protein transpeptidase domain ATOBIA_N11950 PF01795 MraW methylase family ATOBIA_N11960 PF02381 MraZ protein, putative antitoxin-like ATOBIA_N11980 PF02899 Phage integrase, N-terminal SAM-like domain ATOBIA_N11980 PF00589 Phage integrase family ATOBIA_N11990 PF06418 CTP synthase N-terminus ATOBIA_N11990 PF00117 Glutamine amidotransferase class-I ATOBIA_N12000 PF08903 Domain of unknown function (DUF1846) ATOBIA_N12010 PF02463 RecF/RecN/SMC N terminal domain ATOBIA_N12020 PF01513 ATP-NAD kinase ATOBIA_N12030 PF01728 FtsJ-like methyltransferase ATOBIA_N12030 PF01479 S4 domain ATOBIA_N12050 PF01029 NusB family ATOBIA_N12070 PF01132 Elongation factor P (EF-P) OB domain ATOBIA_N12070 PF08207 Elongation factor P (EF-P) KOW-like domain ATOBIA_N12070 PF09285 Elongation factor P, C-terminal ATOBIA_N12090 PF03613 PTS system mannose/fructose/sorbose family IID component ATOBIA_N12100 PF03609 PTS system sorbose-specific iic component ATOBIA_N12110 PF03610 PTS system fructose IIA component ATOBIA_N12110 PF03830 PTS system sorbose subfamily IIB component ATOBIA_N12120 PF01321 Creatinase/Prolidase N-terminal domain ATOBIA_N12120 PF00557 Metallopeptidase family M24 ATOBIA_N12140 PF01202 Shikimate kinase ATOBIA_N12160 PF13344 Haloacid dehalogenase-like hydrolase ATOBIA_N12170 PF02618 YceG-like family ATOBIA_N12180 PF03652 Holliday junction resolvase ATOBIA_N12190 PF01411 tRNA synthetases class II (A) ATOBIA_N12190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATOBIA_N12190 PF02272 DHHA1 domain ATOBIA_N12210 PF04542 Sigma-70 region 2 ATOBIA_N12210 PF04539 Sigma-70 region 3 ATOBIA_N12210 PF04545 Sigma-70, region 4 ATOBIA_N12240 PF12002 MgsA AAA+ ATPase C terminal ATOBIA_N12240 PF00004 ATPase family associated with various cellular activities (AAA) ATOBIA_N12240 PF16193 AAA C-terminal domain ATOBIA_N12250 PF07722 Peptidase C26 ATOBIA_N12260 PF03169 OPT oligopeptide transporter protein ATOBIA_N12280 PF01966 HD domain ATOBIA_N12280 PF13286 Phosphohydrolase-associated domain ATOBIA_N12320 PF05524 PEP-utilising enzyme, N-terminal ATOBIA_N12320 PF00391 PEP-utilising enzyme, mobile domain ATOBIA_N12320 PF02896 PEP-utilising enzyme, TIM barrel domain ATOBIA_N12320 PF00381 PTS HPr component phosphorylation site ATOBIA_N12320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATOBIA_N12330 PF00186 Dihydrofolate reductase ATOBIA_N12340 PF00303 Thymidylate synthase ATOBIA_N12360 PF00293 NUDIX domain ATOBIA_N12370 PF00149 Calcineurin-like phosphoesterase ATOBIA_N12380 PF02082 Transcriptional regulator ATOBIA_N12390 PF01053 Cys/Met metabolism PLP-dependent enzyme ATOBIA_N12400 PF00291 Pyridoxal-phosphate dependent enzyme ATOBIA_N12420 PF01541 GIY-YIG catalytic domain ATOBIA_N12440 PF00465 Iron-containing alcohol dehydrogenase ATOBIA_N12440 PF00171 Aldehyde dehydrogenase family ATOBIA_N12500 PF03591 AzlC protein ATOBIA_N12520 PF00150 Cellulase (glycosyl hydrolase family 5) ATOBIA_N12580 PF02986 Fibronectin binding repeat ATOBIA_N12580 PF17961 Bacterial Ig domain ATOBIA_N12580 PF10425 C-terminus of bacterial fibrinogen-binding adhesin ATOBIA_N12580 PF00746 LPXTG cell wall anchor motif ATOBIA_N12580 PF04650 YSIRK type signal peptide ATOBIA_N12610 PF00155 Aminotransferase class I and II ATOBIA_N12610 PF00392 Bacterial regulatory proteins, gntR family ATOBIA_N12650 PF02595 Glycerate kinase family ATOBIA_N12660 PF03129 Anticodon binding domain ATOBIA_N12660 PF02824 TGS domain ATOBIA_N12660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATOBIA_N12660 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATOBIA_N12690 PF10576 Iron-sulfur binding domain of endonuclease III ATOBIA_N12690 PF00633 Helix-hairpin-helix motif ATOBIA_N12690 PF00730 HhH-GPD superfamily base excision DNA repair protein ATOBIA_N12710 PF02875 Mur ligase family, glutamate ligase domain ATOBIA_N12710 PF08245 Mur ligase middle domain ATOBIA_N12720 PF01812 5-formyltetrahydrofolate cyclo-ligase family ATOBIA_N12730 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ATOBIA_N12740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ATOBIA_N12750 PF02378 Phosphotransferase system, EIIC ATOBIA_N12760 PF00232 Glycosyl hydrolase family 1 ATOBIA_N12770 PF07702 UTRA domain ATOBIA_N12770 PF00392 Bacterial regulatory proteins, gntR family ATOBIA_N12780 PF00480 ROK family ATOBIA_N12790 PF08244 Glycosyl hydrolases family 32 C terminal ATOBIA_N12790 PF00251 Glycosyl hydrolases family 32 N-terminal domain ATOBIA_N12800 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ATOBIA_N12800 PF00367 phosphotransferase system, EIIB ATOBIA_N12800 PF02378 Phosphotransferase system, EIIC ATOBIA_N12810 PF00356 Bacterial regulatory proteins, lacI family ATOBIA_N12820 PF08264 Anticodon-binding domain of tRNA ATOBIA_N12820 PF00133 tRNA synthetases class I (I, L, M and V) ATOBIA_N12820 PF10458 Valyl tRNA synthetase tRNA binding arm ATOBIA_N12850 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATOBIA_N12850 PF02774 Semialdehyde dehydrogenase, dimerisation domain ATOBIA_N12860 PF13840 ACT domain ATOBIA_N12860 PF00696 Amino acid kinase family ATOBIA_N12870 PF01842 ACT domain ATOBIA_N12870 PF00742 Homoserine dehydrogenase ATOBIA_N12870 PF03447 Homoserine dehydrogenase, NAD binding domain ATOBIA_N12880 PF00291 Pyridoxal-phosphate dependent enzyme ATOBIA_N12880 PF14821 Threonine synthase N terminus ATOBIA_N12890 PF08544 GHMP kinases C terminal ATOBIA_N12890 PF00288 GHMP kinases N terminal domain ATOBIA_N12940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATOBIA_N12940 PF07497 Rho termination factor, RNA-binding domain ATOBIA_N12940 PF07498 Rho termination factor, N-terminal domain ATOBIA_N12960 PF03485 Arginyl tRNA synthetase N terminal domain ATOBIA_N12960 PF00750 tRNA synthetases class I (R) ATOBIA_N12960 PF05746 DALR anticodon binding domain ATOBIA_N12970 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ATOBIA_N12970 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ATOBIA_N13020 PF00953 Glycosyl transferase family 4 ATOBIA_N13030 PF00453 Ribosomal protein L20 ATOBIA_N13040 PF01632 Ribosomal protein L35 ATOBIA_N13050 PF00707 Translation initiation factor IF-3, C-terminal domain ATOBIA_N13050 PF05198 Translation initiation factor IF-3, N-terminal domain ATOBIA_N13080 PF00753 Metallo-beta-lactamase superfamily ATOBIA_N13090 PF13291 ACT domain ATOBIA_N13090 PF04607 Region found in RelA / SpoT proteins ATOBIA_N13090 PF02824 TGS domain ATOBIA_N13100 PF17768 RecJ OB domain ATOBIA_N13100 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ATOBIA_N13100 PF02272 DHHA1 domain ATOBIA_N13100 PF01368 DHH family ATOBIA_N13110 PF01702 Queuine tRNA-ribosyltransferase ATOBIA_N13130 PF02547 Queuosine biosynthesis protein ATOBIA_N13140 PF02677 Epoxyqueuosine reductase QueH ATOBIA_N13160 PF08264 Anticodon-binding domain of tRNA ATOBIA_N13160 PF09334 tRNA synthetases class I (M) ATOBIA_N13160 PF01588 Putative tRNA binding domain ATOBIA_N13170 PF01381 Helix-turn-helix ATOBIA_N13180 PF00465 Iron-containing alcohol dehydrogenase ATOBIA_N13190 PF00701 Dihydrodipicolinate synthetase family ATOBIA_N13200 PF05025 RbsD / FucU transport protein family ATOBIA_N13220 PF07690 Major Facilitator Superfamily ATOBIA_N13240 PF08666 SAF domain ATOBIA_N13240 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ATOBIA_N13280 PF00664 ABC transporter transmembrane region ATOBIA_N13280 PF00005 ABC transporter ATOBIA_N13290 PF00664 ABC transporter transmembrane region ATOBIA_N13290 PF00005 ABC transporter ATOBIA_N13300 PF02811 PHP domain ATOBIA_N13320 PF00535 Glycosyl transferase family 2 ATOBIA_N13340 PF03109 ABC1 family ATOBIA_N13370 PF00266 Aminotransferase class-V ATOBIA_N13380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATOBIA_N13380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATOBIA_N13420 PF00899 ThiF family ATOBIA_N13440 PF00403 Heavy-metal-associated domain ATOBIA_N13450 PF01022 Bacterial regulatory protein, arsR family ATOBIA_N13480 PF01546 Peptidase family M20/M25/M40 ATOBIA_N13500 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ATOBIA_N13530 PF00313 'Cold-shock' DNA-binding domain ATOBIA_N13540 PF01268 Formate--tetrahydrofolate ligase ATOBIA_N13560 PF17864 RuvB AAA lid domain ATOBIA_N13560 PF05491 RuvB C-terminal winged helix domain ATOBIA_N13560 PF05496 Holliday junction DNA helicase RuvB P-loop domain ATOBIA_N13570 PF01330 RuvA N terminal domain ATOBIA_N13570 PF07499 RuvA, C-terminal domain ATOBIA_N13580 PF02075 Crossover junction endodeoxyribonuclease RuvC ATOBIA_N13590 PF00795 Carbon-nitrogen hydrolase ATOBIA_N13590 PF02540 NAD synthase ATOBIA_N13600 PF01880 Desulfoferrodoxin ATOBIA_N13640 PF13520 Amino acid permease ATOBIA_N13660 PF13520 Amino acid permease ATOBIA_N13670 PF03051 Peptidase C1-like family ATOBIA_N13690 PF13520 Amino acid permease ATOBIA_N13700 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATOBIA_N13700 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATOBIA_N13700 PF14579 Helix-hairpin-helix motif ATOBIA_N13700 PF02811 PHP domain ATOBIA_N13700 PF01336 OB-fold nucleic acid binding domain ATOBIA_N13730 PF01371 Trp repressor protein ATOBIA_N13740 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV ATOBIA_N13760 PF02934 GatB/GatE catalytic domain ATOBIA_N13760 PF02637 GatB domain ATOBIA_N13770 PF01425 Amidase ATOBIA_N13780 PF02686 Glu-tRNAGln amidotransferase C subunit ATOBIA_N13790 PF00113 Enolase, C-terminal TIM barrel domain ATOBIA_N13790 PF03952 Enolase, N-terminal domain ATOBIA_N13830 PF00005 ABC transporter ATOBIA_N13840 PF01458 Uncharacterized protein family (UPF0051) ATOBIA_N13860 PF00266 Aminotransferase class-V ATOBIA_N13870 PF01592 NifU-like N terminal domain ATOBIA_N13880 PF02082 Transcriptional regulator ATOBIA_N13890 PF08239 Bacterial SH3 domain ATOBIA_N13890 PF00877 NlpC/P60 family ATOBIA_N13890 PF01476 LysM domain ATOBIA_N13900 PF01116 Fructose-bisphosphate aldolase class-II ATOBIA_N13930 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ATOBIA_N13930 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATOBIA_N13940 PF00310 Glutamine amidotransferases class-II ATOBIA_N13940 PF04898 Glutamate synthase central domain ATOBIA_N13940 PF01645 Conserved region in glutamate synthase ATOBIA_N13940 PF01493 GXGXG motif ATOBIA_N13970 PF00533 BRCA1 C Terminus (BRCT) domain ATOBIA_N13970 PF01653 NAD-dependent DNA ligase adenylation domain ATOBIA_N13970 PF03120 NAD-dependent DNA ligase OB-fold domain ATOBIA_N13970 PF12826 Helix-hairpin-helix motif ATOBIA_N13970 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ATOBIA_N13980 PF00403 Heavy-metal-associated domain ATOBIA_N13990 PF13180 PDZ domain ATOBIA_N14000 PF00486 Transcriptional regulatory protein, C terminal ATOBIA_N14010 PF00005 ABC transporter ATOBIA_N14020 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N14030 PF00497 Bacterial extracellular solute-binding proteins, family 3 ATOBIA_N14030 PF01464 Transglycosylase SLT domain ATOBIA_N14040 PF00120 Glutamine synthetase, catalytic domain ATOBIA_N14040 PF03951 Glutamine synthetase, beta-Grasp domain ATOBIA_N14060 PF00300 Histidine phosphatase superfamily (branch 1) ATOBIA_N14070 PF00128 Alpha amylase, catalytic domain ATOBIA_N14070 PF09154 Domain of unknown function (DUF1939) ATOBIA_N14110 PF00155 Aminotransferase class I and II ATOBIA_N14120 PF02423 Ornithine cyclodeaminase/mu-crystallin family ATOBIA_N14140 PF04023 FeoA domain ATOBIA_N14140 PF07664 Ferrous iron transport protein B C terminus ATOBIA_N14140 PF17910 FeoB cytosolic helical domain ATOBIA_N14140 PF02421 Ferrous iron transport protein B ATOBIA_N14140 PF07670 Nucleoside recognition ATOBIA_N14150 PF04023 FeoA domain ATOBIA_N14150 PF07664 Ferrous iron transport protein B C terminus ATOBIA_N14150 PF17910 FeoB cytosolic helical domain ATOBIA_N14150 PF02421 Ferrous iron transport protein B ATOBIA_N14150 PF07670 Nucleoside recognition ATOBIA_N14190 PF13419 Haloacid dehalogenase-like hydrolase ATOBIA_N14200 PF02938 GAD domain ATOBIA_N14200 PF00152 tRNA synthetases class II (D, K and N) ATOBIA_N14200 PF01336 OB-fold nucleic acid binding domain ATOBIA_N14240 PF03606 C4-dicarboxylate anaerobic carrier ATOBIA_N14260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATOBIA_N14260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATOBIA_N14290 PF00664 ABC transporter transmembrane region ATOBIA_N14290 PF00005 ABC transporter ATOBIA_N14300 PF00664 ABC transporter transmembrane region ATOBIA_N14300 PF00005 ABC transporter ATOBIA_N14320 PF01479 S4 domain ATOBIA_N14320 PF00849 RNA pseudouridylate synthase ATOBIA_N14340 PF13393 Histidyl-tRNA synthetase ATOBIA_N14340 PF03129 Anticodon binding domain ATOBIA_N14350 PF02378 Phosphotransferase system, EIIC ATOBIA_N14350 PF00367 phosphotransferase system, EIIB ATOBIA_N14350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ATOBIA_N14360 PF00497 Bacterial extracellular solute-binding proteins, family 3 ATOBIA_N14370 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N14380 PF00005 ABC transporter ATOBIA_N14410 PF01063 Amino-transferase class IV ATOBIA_N14460 PF13419 Haloacid dehalogenase-like hydrolase ATOBIA_N14510 PF18273 Type III R-M EcoP15I C-terminal domain ATOBIA_N14510 PF01555 DNA methylase ATOBIA_N14540 PF00270 DEAD/DEAH box helicase ATOBIA_N14540 PF18019 HD domain ATOBIA_N14540 PF18395 Cas3 C-terminal domain ATOBIA_N14550 PF03932 CutC family ATOBIA_N14580 PF01048 Phosphorylase superfamily ATOBIA_N14610 PF00180 Isocitrate/isopropylmalate dehydrogenase ATOBIA_N14610 PF18324 Hypothetical protein TT1725 ATOBIA_N14640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATOBIA_N14640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATOBIA_N14650 PF02645 Uncharacterised protein, DegV family COG1307 ATOBIA_N14660 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ATOBIA_N14660 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ATOBIA_N14680 PF00156 Phosphoribosyl transferase domain ATOBIA_N14690 PF01026 TatD related DNase ATOBIA_N14700 PF00398 Ribosomal RNA adenine dimethylase ATOBIA_N14710 PF08264 Anticodon-binding domain of tRNA ATOBIA_N14710 PF09334 tRNA synthetases class I (M) ATOBIA_N14710 PF01588 Putative tRNA binding domain ATOBIA_N14720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATOBIA_N14840 PF00437 Type II/IV secretion system protein ATOBIA_N14870 PF03193 RsgA GTPase ATOBIA_N14880 PF00465 Iron-containing alcohol dehydrogenase ATOBIA_N14890 PF00465 Iron-containing alcohol dehydrogenase ATOBIA_N14900 PF00689 Cation transporting ATPase, C-terminus ATOBIA_N14900 PF00690 Cation transporter/ATPase, N-terminus ATOBIA_N14910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATOBIA_N14910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATOBIA_N14920 PF02887 Pyruvate kinase, alpha/beta domain ATOBIA_N14920 PF00224 Pyruvate kinase, barrel domain ATOBIA_N14920 PF00391 PEP-utilising enzyme, mobile domain ATOBIA_N15120 PF02645 Uncharacterised protein, DegV family COG1307 ATOBIA_N15140 PF07702 UTRA domain ATOBIA_N15140 PF00392 Bacterial regulatory proteins, gntR family ATOBIA_N15160 PF04074 YhcH/YjgK/YiaL ATOBIA_N15170 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ATOBIA_N15170 PF01588 Putative tRNA binding domain ATOBIA_N15170 PF03147 Ferredoxin-fold anticodon binding domain ATOBIA_N15170 PF03484 tRNA synthetase B5 domain ATOBIA_N15170 PF03483 B3/4 domain ATOBIA_N15180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ATOBIA_N15180 PF01409 tRNA synthetases class II core domain (F) ATOBIA_N15190 PF08220 DeoR-like helix-turn-helix domain ATOBIA_N15190 PF00455 DeoR C terminal sensor domain ATOBIA_N15200 PF00392 Bacterial regulatory proteins, gntR family ATOBIA_N15200 PF07729 FCD domain ATOBIA_N15210 PF00392 Bacterial regulatory proteins, gntR family ATOBIA_N15210 PF07702 UTRA domain ATOBIA_N15220 PF04055 Radical SAM superfamily ATOBIA_N15230 PF02901 Pyruvate formate lyase-like ATOBIA_N15230 PF01228 Glycine radical ATOBIA_N15300 PF00294 pfkB family carbohydrate kinase ATOBIA_N15310 PF08220 DeoR-like helix-turn-helix domain ATOBIA_N15310 PF00455 DeoR C terminal sensor domain ATOBIA_N15320 PF01116 Fructose-bisphosphate aldolase class-II ATOBIA_N15350 PF05970 PIF1-like helicase ATOBIA_N15370 PF04055 Radical SAM superfamily ATOBIA_N15370 PF16199 Radical_SAM C-terminal domain ATOBIA_N15370 PF00583 Acetyltransferase (GNAT) family ATOBIA_N15390 PF01979 Amidohydrolase family ATOBIA_N15440 PF00480 ROK family ATOBIA_N15450 PF01820 D-ala D-ala ligase N-terminus ATOBIA_N15450 PF07478 D-ala D-ala ligase C-terminus ATOBIA_N15460 PF00155 Aminotransferase class I and II ATOBIA_N15470 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ATOBIA_N15480 PF02580 D-Tyr-tRNA(Tyr) deacylase ATOBIA_N15490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATOBIA_N15490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATOBIA_N15530 PF00155 Aminotransferase class I and II ATOBIA_N15550 PF13476 AAA domain ATOBIA_N15560 PF00149 Calcineurin-like phosphoesterase ATOBIA_N15560 PF12320 Type 5 capsule protein repressor C-terminal domain ATOBIA_N15570 PF01368 DHH family ATOBIA_N15570 PF00571 CBS domain ATOBIA_N15570 PF07085 DRTGG domain ATOBIA_N15570 PF02833 DHHA2 domain ATOBIA_N15590 PF01741 Large-conductance mechanosensitive channel, MscL ATOBIA_N15600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATOBIA_N15600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATOBIA_N15610 PF02126 Phosphotriesterase family ATOBIA_N15620 PF13378 Enolase C-terminal domain-like ATOBIA_N15620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATOBIA_N15630 PF03611 PTS system sugar-specific permease component ATOBIA_N15640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ATOBIA_N15670 PF10371 Domain of unknown function ATOBIA_N15670 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ATOBIA_N15670 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ATOBIA_N15670 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ATOBIA_N15670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATOBIA_N15680 PF00654 Voltage gated chloride channel ATOBIA_N15690 PF03547 Membrane transport protein ATOBIA_N15700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATOBIA_N15700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATOBIA_N15700 PF00205 Thiamine pyrophosphate enzyme, central domain ATOBIA_N15720 PF02515 CoA-transferase family III ATOBIA_N15740 PF00005 ABC transporter ATOBIA_N15850 PF00465 Iron-containing alcohol dehydrogenase ATOBIA_N15880 PF03883 Peroxide stress protein YaaA ATOBIA_N15920 PF00294 pfkB family carbohydrate kinase ATOBIA_N15940 PF11208 Protein of unknown function (DUF2992) ATOBIA_N15950 PF00005 ABC transporter ATOBIA_N15950 PF12848 ABC transporter ATOBIA_N15970 PF00005 ABC transporter ATOBIA_N15980 PF00486 Transcriptional regulatory protein, C terminal ATOBIA_N15980 PF00072 Response regulator receiver domain ATOBIA_N15990 PF00512 His Kinase A (phospho-acceptor) domain ATOBIA_N15990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATOBIA_N16080 PF00365 Phosphofructokinase ATOBIA_N16120 PF01661 Macro domain ATOBIA_N16150 PF00072 Response regulator receiver domain ATOBIA_N16150 PF00486 Transcriptional regulatory protein, C terminal ATOBIA_N16170 PF00118 TCP-1/cpn60 chaperonin family ATOBIA_N16180 PF00166 Chaperonin 10 Kd subunit ATOBIA_N16220 PF02540 NAD synthase ATOBIA_N16220 PF00795 Carbon-nitrogen hydrolase ATOBIA_N16230 PF07969 Amidohydrolase family ATOBIA_N16240 PF00005 ABC transporter ATOBIA_N16250 PF00528 Binding-protein-dependent transport system inner membrane component ATOBIA_N16260 PF00497 Bacterial extracellular solute-binding proteins, family 3 ATOBIA_N16290 PF00497 Bacterial extracellular solute-binding proteins, family 3 ATOBIA_N16300 PF00367 phosphotransferase system, EIIB ATOBIA_N16300 PF02378 Phosphotransferase system, EIIC ATOBIA_N16300 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ATOBIA_N16310 PF04468 PSP1 C-terminal conserved region ATOBIA_N16320 PF09115 DNA polymerase III, delta subunit, C terminal ATOBIA_N16330 PF02223 Thymidylate kinase ATOBIA_N16350 PF01751 Toprim domain ATOBIA_N16350 PF01131 DNA topoisomerase ATOBIA_N16350 PF01396 Topoisomerase DNA binding C4 zinc finger ATOBIA_N16360 PF00902 Sec-independent protein translocase protein (TatC) ATOBIA_N16370 PF02416 mttA/Hcf106 family ATOBIA_N16400 PF12897 Alanine-glyoxylate amino-transferase ATOBIA_N16430 PF06965 Na+/H+ antiporter 1 ATOBIA_N16440 PF02645 Uncharacterised protein, DegV family COG1307 ATOBIA_N16450 PF12728 Helix-turn-helix domain ATOBIA_N16450 PF02661 Fic/DOC family ATOBIA_N16500 PF00580 UvrD/REP helicase N-terminal domain ATOBIA_N16500 PF13361 UvrD-like helicase C-terminal domain ATOBIA_N16510 PF02965 Vitamin B12 dependent methionine synthase, activation domain ATOBIA_N16510 PF02607 B12 binding domain ATOBIA_N16510 PF02574 Homocysteine S-methyltransferase ATOBIA_N16510 PF00809 Pterin binding enzyme ATOBIA_N16510 PF02310 B12 binding domain ATOBIA_N16530 PF02219 Methylenetetrahydrofolate reductase ATOBIA_N16540 PF02673 Bacitracin resistance protein BacA ATOBIA_N16580 PF00892 EamA-like transporter family ATOBIA_N16590 PF00675 Insulinase (Peptidase family M16) ATOBIA_N16590 PF08367 Peptidase M16C associated ATOBIA_N16590 PF05193 Peptidase M16 inactive domain ATOBIA_N16610 PF01869 BadF/BadG/BcrA/BcrD ATPase family ATOBIA_N16630 PF00005 ABC transporter ATOBIA_N16640 PF02646 RmuC family ATOBIA_N16650 PF00171 Aldehyde dehydrogenase family ATOBIA_N16670 PF00561 alpha/beta hydrolase fold ATOBIA_N16690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATOBIA_N16700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATOBIA_N16710 PF00571 CBS domain ATOBIA_N16710 PF03471 Transporter associated domain ATOBIA_N16710 PF01595 Cyclin M transmembrane N-terminal domain ATOBIA_N16730 PF00258 Flavodoxin ATOBIA_N16730 PF00753 Metallo-beta-lactamase superfamily ATOBIA_N16740 PF00679 Elongation factor G C-terminus ATOBIA_N16740 PF14492 Elongation Factor G, domain II ATOBIA_N16740 PF03764 Elongation factor G, domain IV ATOBIA_N16740 PF00009 Elongation factor Tu GTP binding domain ATOBIA_N16740 PF03144 Elongation factor Tu domain 2 ATOBIA_N16750 PF00365 Phosphofructokinase ATOBIA_N16780 PF13195 Protein of unknown function (DUF4011) ATOBIA_N16780 PF13087 AAA domain ATOBIA_N16780 PF13086 AAA domain ATOBIA_N16780 PF13087 AAA domain ATOBIA_N16780 PF13086 AAA domain ATOBIA_N16780 PF13195 Protein of unknown function (DUF4011) ATOBIA_N16790 PF02308 MgtC family ATOBIA_N16830 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ATOBIA_N16830 PF00056 lactate/malate dehydrogenase, NAD binding domain ATOBIA_N16840 PF01938 TRAM domain ATOBIA_N16840 PF05958 tRNA (Uracil-5-)-methyltransferase ATOBIA_N16850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATOBIA_N16860 PF00072 Response regulator receiver domain ATOBIA_N16860 PF00486 Transcriptional regulatory protein, C terminal ATOBIA_N16890 PF01808 AICARFT/IMPCHase bienzyme ATOBIA_N16890 PF02142 MGS-like domain ATOBIA_N16910 PF00696 Amino acid kinase family ATOBIA_N16980 PF13439 Glycosyltransferase Family 4 ATOBIA_N16990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATOBIA_N16990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATOBIA_N16990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATOBIA_N17000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATOBIA_N17000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATOBIA_N17000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATOBIA_N17010 PF00535 Glycosyl transferase family 2 ATOBIA_N17020 PF00483 Nucleotidyl transferase ATOBIA_N17030 PF16363 GDP-mannose 4,6 dehydratase ATOBIA_N17040 PF04321 RmlD substrate binding domain ATOBIA_N17050 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ATOBIA_N17070 PF00210 Ferritin-like domain ATOBIA_N17080 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATOBIA_N17120 PF01381 Helix-turn-helix ATOBIA_N17140 PF02403 Seryl-tRNA synthetase N-terminal domain ATOBIA_N17140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATOBIA_N17160 PF03793 PASTA domain ATOBIA_N17160 PF00069 Protein kinase domain ATOBIA_N17200 PF01098 Cell cycle protein ATOBIA_N17210 PF03793 PASTA domain ATOBIA_N17210 PF00069 Protein kinase domain ATOBIA_N17220 PF00005 ABC transporter ATOBIA_N17220 PF12848 ABC transporter ATOBIA_N17250 PF01259 SAICAR synthetase ATOBIA_N17260 PF00672 HAMP domain ATOBIA_N17260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATOBIA_N17260 PF00512 His Kinase A (phospho-acceptor) domain ATOBIA_N17270 PF00072 Response regulator receiver domain ATOBIA_N17270 PF00486 Transcriptional regulatory protein, C terminal ATOBIA_N17310 PF00206 Lyase ATOBIA_N17310 PF10397 Adenylosuccinate lyase C-terminus ATOBIA_N17340 PF02073 Thermophilic metalloprotease (M29) ATOBIA_N17390 PF07581 The GLUG motif ATOBIA_N17390 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) ATOBIA_N17430 PF06733 DEAD_2 ATOBIA_N17430 PF13307 Helicase C-terminal domain ATOBIA_N17440 PF07478 D-ala D-ala ligase C-terminus ATOBIA_N17440 PF01820 D-ala D-ala ligase N-terminus ATOBIA_N17450 PF04055 Radical SAM superfamily ATOBIA_N17470 PF17762 HTH domain found in ParB protein ATOBIA_N17470 PF02195 ParB-like nuclease domain ATOBIA_N17480 PF13614 AAA domain ATOBIA_N17490 PF02527 rRNA small subunit methyltransferase G ATOBIA_N17500 PF14804 Jag N-terminus ATOBIA_N17500 PF01424 R3H domain ATOBIA_N17510 PF02096 60Kd inner membrane protein ATOBIA_N17510 PF14849 YidC periplasmic domain ATOBIA_N17520 PF01809 Putative membrane protein insertion efficiency factor ATOBIA_N17530 PF00825 Ribonuclease P ATOBIA_N17540 PF00468 Ribosomal protein L34