locus-tag class description AURMO_00001 PF00308 Bacterial dnaA protein AURMO_00001 PF08299 Bacterial dnaA protein helix-turn-helix AURMO_00002 PF00468 Ribosomal protein L34 AURMO_00003 PF00825 Ribonuclease P AURMO_00004 PF01809 Putative membrane protein insertion efficiency factor AURMO_00005 PF02096 60Kd inner membrane protein AURMO_00007 PF02527 rRNA small subunit methyltransferase G AURMO_00008 PF13614 AAA domain AURMO_00009 PF02195 ParB-like nuclease domain AURMO_00009 PF17762 HTH domain found in ParB protein AURMO_00010 PF01820 D-ala D-ala ligase N-terminus AURMO_00010 PF07478 D-ala D-ala ligase C-terminus AURMO_00011 PF00155 Aminotransferase class I and II AURMO_00012 PF00085 Thioredoxin AURMO_00013 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURMO_00015 PF01743 Poly A polymerase head domain AURMO_00015 PF13735 tRNA nucleotidyltransferase domain 2 putative AURMO_00015 PF12627 Probable RNA and SrmB- binding site of polymerase A AURMO_00016 PF01250 Ribosomal protein S6 AURMO_00017 PF00436 Single-strand binding protein family AURMO_00018 PF01084 Ribosomal protein S18 AURMO_00019 PF01281 Ribosomal protein L9, N-terminal domain AURMO_00019 PF03948 Ribosomal protein L9, C-terminal domain AURMO_00020 PF03796 DnaB-like helicase C terminal domain AURMO_00020 PF00772 DnaB-like helicase N terminal domain AURMO_00023 PF08328 Adenylosuccinate lyase C-terminal AURMO_00023 PF00206 Lyase AURMO_00027 PF00676 Dehydrogenase E1 component AURMO_00028 PF02779 Transketolase, pyrimidine binding domain AURMO_00028 PF02780 Transketolase, C-terminal domain AURMO_00029 PF00364 Biotin-requiring enzyme AURMO_00029 PF02817 e3 binding domain AURMO_00029 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AURMO_00030 PF02661 Fic/DOC family AURMO_00030 PF13784 Fic/DOC family N-terminal AURMO_00031 PF01810 LysE type translocator AURMO_00033 PF01037 Lrp/AsnC ligand binding domain AURMO_00034 PF01144 Coenzyme A transferase AURMO_00035 PF01144 Coenzyme A transferase AURMO_00036 PF02803 Thiolase, C-terminal domain AURMO_00036 PF00108 Thiolase, N-terminal domain AURMO_00038 PF01565 FAD binding domain AURMO_00038 PF02913 FAD linked oxidases, C-terminal domain AURMO_00044 PF01494 FAD binding domain AURMO_00045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AURMO_00045 PF03466 LysR substrate binding domain AURMO_00046 PF07690 Major Facilitator Superfamily AURMO_00049 PF08031 Berberine and berberine like AURMO_00049 PF01565 FAD binding domain AURMO_00053 PF00005 ABC transporter AURMO_00054 PF02653 Branched-chain amino acid transport system / permease component AURMO_00057 PF00171 Aldehyde dehydrogenase family AURMO_00058 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AURMO_00058 PF03466 LysR substrate binding domain AURMO_00061 PF02875 Mur ligase family, glutamate ligase domain AURMO_00061 PF01225 Mur ligase family, catalytic domain AURMO_00061 PF08245 Mur ligase middle domain AURMO_00062 PF07685 CobB/CobQ-like glutamine amidotransferase domain AURMO_00062 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AURMO_00063 PF00854 POT family AURMO_00064 PF12146 Serine aminopeptidase, S33 AURMO_00066 PF01555 DNA methylase AURMO_00073 PF00005 ABC transporter AURMO_00073 PF00664 ABC transporter transmembrane region AURMO_00074 PF00005 ABC transporter AURMO_00074 PF00664 ABC transporter transmembrane region AURMO_00074 PF03412 Peptidase C39 family AURMO_00076 PF02709 N-terminal domain of galactosyltransferase AURMO_00076 PF00535 Glycosyl transferase family 2 AURMO_00081 PF07690 Major Facilitator Superfamily AURMO_00082 PF01638 HxlR-like helix-turn-helix AURMO_00084 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AURMO_00084 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AURMO_00084 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AURMO_00084 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AURMO_00085 PF00800 Prephenate dehydratase AURMO_00085 PF01842 ACT domain AURMO_00086 PF02403 Seryl-tRNA synthetase N-terminal domain AURMO_00086 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AURMO_00089 PF03816 Cell envelope-related transcriptional attenuator domain AURMO_00089 PF13399 LytR cell envelope-related transcriptional attenuator AURMO_00092 PF00271 Helicase conserved C-terminal domain AURMO_00092 PF00270 DEAD/DEAH box helicase AURMO_00094 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AURMO_00094 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AURMO_00094 PF02770 Acyl-CoA dehydrogenase, middle domain AURMO_00095 PF07690 Major Facilitator Superfamily AURMO_00098 PF03976 Polyphosphate kinase 2 (PPK2) AURMO_00099 PF01738 Dienelactone hydrolase family AURMO_00100 PF00809 Pterin binding enzyme AURMO_00100 PF02965 Vitamin B12 dependent methionine synthase, activation domain AURMO_00100 PF02607 B12 binding domain AURMO_00100 PF02574 Homocysteine S-methyltransferase AURMO_00100 PF02310 B12 binding domain AURMO_00103 PF00005 ABC transporter AURMO_00107 PF00440 Bacterial regulatory proteins, tetR family AURMO_00107 PF02909 Tetracyclin repressor-like, C-terminal domain AURMO_00108 PF00202 Aminotransferase class-III AURMO_00109 PF00490 Delta-aminolevulinic acid dehydratase AURMO_00111 PF03900 Porphobilinogen deaminase, C-terminal domain AURMO_00111 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AURMO_00112 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AURMO_00112 PF01488 Shikimate / quinate 5-dehydrogenase AURMO_00112 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AURMO_00113 PF01208 Uroporphyrinogen decarboxylase (URO-D) AURMO_00122 PF13276 HTH-like domain AURMO_00122 PF13333 Integrase core domain AURMO_00122 PF00665 Integrase core domain AURMO_00123 PF00719 Inorganic pyrophosphatase AURMO_00124 PF09179 TilS substrate binding domain AURMO_00124 PF01171 PP-loop family AURMO_00126 PF01434 Peptidase family M41 AURMO_00126 PF17862 AAA+ lid domain AURMO_00126 PF00004 ATPase family associated with various cellular activities (AAA) AURMO_00127 PF01227 GTP cyclohydrolase I AURMO_00128 PF00809 Pterin binding enzyme AURMO_00129 PF02152 Dihydroneopterin aldolase AURMO_00130 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AURMO_00133 PF02569 Pantoate-beta-alanine ligase AURMO_00134 PF01336 OB-fold nucleic acid binding domain AURMO_00134 PF00152 tRNA synthetases class II (D, K and N) AURMO_00136 PF13396 Phospholipase_D-nuclease N-terminal AURMO_00136 PF13091 PLD-like domain AURMO_00137 PF00248 Aldo/keto reductase family AURMO_00138 PF04073 Aminoacyl-tRNA editing domain AURMO_00139 PF04993 TfoX N-terminal domain AURMO_00141 PF02678 Pirin AURMO_00141 PF05726 Pirin C-terminal cupin domain AURMO_00142 PF02861 Clp amino terminal domain, pathogenicity island component AURMO_00142 PF00004 ATPase family associated with various cellular activities (AAA) AURMO_00142 PF07724 AAA domain (Cdc48 subfamily) AURMO_00142 PF10431 C-terminal, D2-small domain, of ClpB protein AURMO_00142 PF17871 AAA lid domain AURMO_00143 PF00583 Acetyltransferase (GNAT) family AURMO_00146 PF00171 Aldehyde dehydrogenase family AURMO_00148 PF02661 Fic/DOC family AURMO_00148 PF18543 Intracellular delivery domain AURMO_00150 PF18073 Rubredoxin metal binding domain AURMO_00152 PF00072 Response regulator receiver domain AURMO_00152 PF00196 Bacterial regulatory proteins, luxR family AURMO_00153 PF07730 Histidine kinase AURMO_00153 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURMO_00153 PF05384 Sensor protein DegS AURMO_00154 PF00005 ABC transporter AURMO_00155 PF12704 MacB-like periplasmic core domain AURMO_00155 PF00005 ABC transporter AURMO_00156 PF12799 Leucine Rich repeats (2 copies) AURMO_00156 PF08191 LRR adjacent AURMO_00156 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) AURMO_00156 PF12354 Bacterial adhesion/invasion protein N terminal AURMO_00157 PF16448 LapD/MoxY periplasmic domain AURMO_00157 PF07730 Histidine kinase AURMO_00157 PF00672 HAMP domain AURMO_00158 PF00072 Response regulator receiver domain AURMO_00158 PF00196 Bacterial regulatory proteins, luxR family AURMO_00160 PF00196 Bacterial regulatory proteins, luxR family AURMO_00160 PF00072 Response regulator receiver domain AURMO_00166 PF00271 Helicase conserved C-terminal domain AURMO_00166 PF00270 DEAD/DEAH box helicase AURMO_00166 PF03880 DbpA RNA binding domain AURMO_00177 PF04565 RNA polymerase Rpb2, domain 3 AURMO_00177 PF10385 RNA polymerase beta subunit external 1 domain AURMO_00177 PF04561 RNA polymerase Rpb2, domain 2 AURMO_00177 PF00562 RNA polymerase Rpb2, domain 6 AURMO_00177 PF04560 RNA polymerase Rpb2, domain 7 AURMO_00177 PF04563 RNA polymerase beta subunit AURMO_00178 PF00623 RNA polymerase Rpb1, domain 2 AURMO_00178 PF04997 RNA polymerase Rpb1, domain 1 AURMO_00178 PF05000 RNA polymerase Rpb1, domain 4 AURMO_00178 PF04998 RNA polymerase Rpb1, domain 5 AURMO_00178 PF04983 RNA polymerase Rpb1, domain 3 AURMO_00180 PF00164 Ribosomal protein S12/S23 AURMO_00181 PF00177 Ribosomal protein S7p/S5e AURMO_00182 PF03144 Elongation factor Tu domain 2 AURMO_00182 PF03764 Elongation factor G, domain IV AURMO_00182 PF00009 Elongation factor Tu GTP binding domain AURMO_00182 PF00679 Elongation factor G C-terminus AURMO_00182 PF14492 Elongation Factor G, domain II AURMO_00183 PF03143 Elongation factor Tu C-terminal domain AURMO_00183 PF03144 Elongation factor Tu domain 2 AURMO_00183 PF00009 Elongation factor Tu GTP binding domain AURMO_00186 PF01740 STAS domain AURMO_00186 PF00916 Sulfate permease family AURMO_00187 PF00338 Ribosomal protein S10p/S20e AURMO_00188 PF00297 Ribosomal protein L3 AURMO_00189 PF00573 Ribosomal protein L4/L1 family AURMO_00190 PF00276 Ribosomal protein L23 AURMO_00191 PF03947 Ribosomal Proteins L2, C-terminal domain AURMO_00191 PF00181 Ribosomal Proteins L2, RNA binding domain AURMO_00192 PF00203 Ribosomal protein S19 AURMO_00193 PF00237 Ribosomal protein L22p/L17e AURMO_00194 PF00189 Ribosomal protein S3, C-terminal domain AURMO_00194 PF07650 KH domain AURMO_00195 PF00252 Ribosomal protein L16p/L10e AURMO_00196 PF00831 Ribosomal L29 protein AURMO_00197 PF00366 Ribosomal protein S17 AURMO_00198 PF00238 Ribosomal protein L14p/L23e AURMO_00199 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AURMO_00200 PF00281 Ribosomal protein L5 AURMO_00200 PF00673 ribosomal L5P family C-terminus AURMO_00201 PF00410 Ribosomal protein S8 AURMO_00202 PF00347 Ribosomal protein L6 AURMO_00203 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AURMO_00204 PF00333 Ribosomal protein S5, N-terminal domain AURMO_00204 PF03719 Ribosomal protein S5, C-terminal domain AURMO_00205 PF00327 Ribosomal protein L30p/L7e AURMO_00206 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AURMO_00207 PF00344 SecY translocase AURMO_00209 PF00557 Metallopeptidase family M24 AURMO_00211 PF01176 Translation initiation factor 1A / IF-1 AURMO_00212 PF00444 Ribosomal protein L36 AURMO_00213 PF00416 Ribosomal protein S13/S18 AURMO_00214 PF00411 Ribosomal protein S11 AURMO_00215 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AURMO_00215 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AURMO_00215 PF01000 RNA polymerase Rpb3/RpoA insert domain AURMO_00216 PF01196 Ribosomal protein L17 AURMO_00217 PF01416 tRNA pseudouridine synthase AURMO_00218 PF13657 HipA N-terminal domain AURMO_00218 PF07804 HipA-like C-terminal domain AURMO_00220 PF00572 Ribosomal protein L13 AURMO_00221 PF00380 Ribosomal protein S9/S16 AURMO_00222 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AURMO_00222 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AURMO_00222 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AURMO_00222 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AURMO_00223 PF00485 Phosphoribulokinase / Uridine kinase family AURMO_00224 PF01380 SIS domain AURMO_00225 PF01648 4'-phosphopantetheinyl transferase superfamily AURMO_00226 PF00842 Alanine racemase, C-terminal domain AURMO_00226 PF01168 Alanine racemase, N-terminal domain AURMO_00227 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AURMO_00228 PF00814 Glycoprotease family AURMO_00228 PF00583 Acetyltransferase (GNAT) family AURMO_00229 PF00583 Acetyltransferase (GNAT) family AURMO_00229 PF00814 Glycoprotease family AURMO_00230 PF00814 Glycoprotease family AURMO_00235 PF00166 Chaperonin 10 Kd subunit AURMO_00237 PF00892 EamA-like transporter family AURMO_00242 PF02540 NAD synthase AURMO_00242 PF00958 GMP synthase C terminal domain AURMO_00242 PF00117 Glutamine amidotransferase class-I AURMO_00245 PF01266 FAD dependent oxidoreductase AURMO_00245 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AURMO_00246 PF00478 IMP dehydrogenase / GMP reductase domain AURMO_00247 PF00571 CBS domain AURMO_00247 PF00478 IMP dehydrogenase / GMP reductase domain AURMO_00249 PF02653 Branched-chain amino acid transport system / permease component AURMO_00249 PF11862 Domain of unknown function (DUF3382) AURMO_00250 PF12399 Branched-chain amino acid ATP-binding cassette transporter AURMO_00250 PF00005 ABC transporter AURMO_00251 PF00005 ABC transporter AURMO_00257 PF00270 DEAD/DEAH box helicase AURMO_00257 PF17191 RecG wedge domain AURMO_00257 PF00271 Helicase conserved C-terminal domain AURMO_00259 PF00145 C-5 cytosine-specific DNA methylase AURMO_00263 PF17191 RecG wedge domain AURMO_00263 PF00271 Helicase conserved C-terminal domain AURMO_00263 PF00270 DEAD/DEAH box helicase AURMO_00283 PF00141 Peroxidase AURMO_00290 PF07731 Multicopper oxidase AURMO_00290 PF07732 Multicopper oxidase AURMO_00291 PF00403 Heavy-metal-associated domain AURMO_00297 PF12169 DNA polymerase III subunits gamma and tau domain III AURMO_00298 PF02132 RecR protein AURMO_00298 PF13662 Toprim domain AURMO_00299 PF07687 Peptidase dimerisation domain AURMO_00299 PF01546 Peptidase family M20/M25/M40 AURMO_00300 PF00696 Amino acid kinase family AURMO_00300 PF01842 ACT domain AURMO_00300 PF13840 ACT domain AURMO_00301 PF01118 Semialdehyde dehydrogenase, NAD binding domain AURMO_00301 PF02774 Semialdehyde dehydrogenase, dimerisation domain AURMO_00302 PF06039 Malate:quinone oxidoreductase (Mqo) AURMO_00306 PF00265 Thymidine kinase AURMO_00307 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AURMO_00307 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AURMO_00307 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AURMO_00309 PF03023 Lipid II flippase MurJ AURMO_00312 PF00912 Transglycosylase AURMO_00312 PF00905 Penicillin binding protein transpeptidase domain AURMO_00315 PF16177 Acetyl-coenzyme A synthetase N-terminus AURMO_00315 PF00501 AMP-binding enzyme AURMO_00315 PF13193 AMP-binding enzyme C-terminal domain AURMO_00316 PF00437 Type II/IV secretion system protein AURMO_00321 PF13368 Topoisomerase C-terminal repeat AURMO_00321 PF01131 DNA topoisomerase AURMO_00321 PF01751 Toprim domain AURMO_00322 PF02223 Thymidylate kinase AURMO_00323 PF09115 DNA polymerase III, delta subunit, C terminal AURMO_00324 PF00561 alpha/beta hydrolase fold AURMO_00324 PF08386 TAP-like protein AURMO_00328 PF04261 Dyp-type peroxidase family AURMO_00331 PF00665 Integrase core domain AURMO_00332 PF03176 MMPL family AURMO_00333 PF00171 Aldehyde dehydrogenase family AURMO_00334 PF13276 HTH-like domain AURMO_00334 PF13333 Integrase core domain AURMO_00334 PF00665 Integrase core domain AURMO_00336 PF00005 ABC transporter AURMO_00336 PF00664 ABC transporter transmembrane region AURMO_00338 PF00885 6,7-dimethyl-8-ribityllumazine synthase AURMO_00339 PF00925 GTP cyclohydrolase II AURMO_00339 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AURMO_00340 PF00677 Lumazine binding domain AURMO_00341 PF01872 RibD C-terminal domain AURMO_00341 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AURMO_00343 PF00579 tRNA synthetases class I (W and Y) AURMO_00344 PF03372 Endonuclease/Exonuclease/phosphatase family AURMO_00346 PF00381 PTS HPr component phosphorylation site AURMO_00347 PF02378 Phosphotransferase system, EIIC AURMO_00347 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AURMO_00348 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AURMO_00349 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AURMO_00349 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AURMO_00350 PF00294 pfkB family carbohydrate kinase AURMO_00351 PF08220 DeoR-like helix-turn-helix domain AURMO_00351 PF00455 DeoR C terminal sensor domain AURMO_00353 PF05524 PEP-utilising enzyme, N-terminal AURMO_00353 PF00391 PEP-utilising enzyme, mobile domain AURMO_00353 PF02896 PEP-utilising enzyme, TIM barrel domain AURMO_00354 PF13085 2Fe-2S iron-sulfur cluster binding domain AURMO_00355 PF00890 FAD binding domain AURMO_00355 PF02910 Fumarate reductase flavoprotein C-term AURMO_00357 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AURMO_00358 PF00483 Nucleotidyl transferase AURMO_00358 PF01050 Mannose-6-phosphate isomerase AURMO_00359 PF00962 Adenosine/AMP deaminase AURMO_00360 PF01048 Phosphorylase superfamily AURMO_00361 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURMO_00361 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AURMO_00362 PF02785 Biotin carboxylase C-terminal domain AURMO_00362 PF00289 Biotin carboxylase, N-terminal domain AURMO_00362 PF00364 Biotin-requiring enzyme AURMO_00362 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AURMO_00363 PF02545 Maf-like protein AURMO_00364 PF05958 tRNA (Uracil-5-)-methyltransferase AURMO_00364 PF01938 TRAM domain AURMO_00366 PF01039 Carboxyl transferase domain AURMO_00369 PF00535 Glycosyl transferase family 2 AURMO_00371 PF02222 ATP-grasp domain AURMO_00371 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AURMO_00372 PF00731 AIR carboxylase AURMO_00373 PF03816 Cell envelope-related transcriptional attenuator domain AURMO_00376 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AURMO_00376 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AURMO_00376 PF02770 Acyl-CoA dehydrogenase, middle domain AURMO_00377 PF01238 Phosphomannose isomerase type I AURMO_00378 PF02467 Transcription factor WhiB AURMO_00383 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AURMO_00383 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AURMO_00383 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AURMO_00383 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AURMO_00384 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AURMO_00384 PF05221 S-adenosyl-L-homocysteine hydrolase AURMO_00385 PF00072 Response regulator receiver domain AURMO_00385 PF00486 Transcriptional regulatory protein, C terminal AURMO_00386 PF00672 HAMP domain AURMO_00386 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURMO_00386 PF00512 His Kinase A (phospho-acceptor) domain AURMO_00387 PF10647 Lipoprotein LpqB beta-propeller domain AURMO_00387 PF10646 Sporulation and spore germination AURMO_00390 PF01043 SecA preprotein cross-linking domain AURMO_00390 PF07517 SecA DEAD-like domain AURMO_00390 PF07516 SecA Wing and Scaffold domain AURMO_00400 PF07859 alpha/beta hydrolase fold AURMO_00401 PF07568 Histidine kinase AURMO_00401 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURMO_00401 PF12282 Signal transduction histidine kinase AURMO_00402 PF00571 CBS domain AURMO_00402 PF01595 Cyclin M transmembrane N-terminal domain AURMO_00402 PF03471 Transporter associated domain AURMO_00403 PF01595 Cyclin M transmembrane N-terminal domain AURMO_00403 PF00571 CBS domain AURMO_00404 PF03853 YjeF-related protein N-terminus AURMO_00404 PF01256 Carbohydrate kinase AURMO_00406 PF00561 alpha/beta hydrolase fold AURMO_00407 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AURMO_00407 PF00378 Enoyl-CoA hydratase/isomerase AURMO_00407 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AURMO_00411 PF01053 Cys/Met metabolism PLP-dependent enzyme AURMO_00412 PF01757 Acyltransferase family AURMO_00413 PF07885 Ion channel AURMO_00414 PF03167 Uracil DNA glycosylase superfamily AURMO_00416 PF02467 Transcription factor WhiB AURMO_00420 PF00578 AhpC/TSA family AURMO_00421 PF16363 GDP-mannose 4,6 dehydratase AURMO_00422 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AURMO_00423 PF16363 GDP-mannose 4,6 dehydratase AURMO_00424 PF03193 RsgA GTPase AURMO_00425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AURMO_00426 PF04542 Sigma-70 region 2 AURMO_00426 PF08281 Sigma-70, region 4 AURMO_00428 PF13936 Helix-turn-helix domain AURMO_00428 PF00665 Integrase core domain AURMO_00429 PF00676 Dehydrogenase E1 component AURMO_00429 PF16870 2-oxoglutarate dehydrogenase C-terminal AURMO_00429 PF02779 Transketolase, pyrimidine binding domain AURMO_00429 PF16078 2-oxoglutarate dehydrogenase N-terminus AURMO_00429 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AURMO_00430 PF01757 Acyltransferase family AURMO_00434 PF00005 ABC transporter AURMO_00434 PF00664 ABC transporter transmembrane region AURMO_00440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AURMO_00440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AURMO_00441 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AURMO_00442 PF00132 Bacterial transferase hexapeptide (six repeats) AURMO_00445 PF00483 Nucleotidyl transferase AURMO_00447 PF00005 ABC transporter AURMO_00449 PF00665 Integrase core domain AURMO_00452 PF03485 Arginyl tRNA synthetase N terminal domain AURMO_00452 PF00750 tRNA synthetases class I (R) AURMO_00452 PF05746 DALR anticodon binding domain AURMO_00453 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AURMO_00453 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AURMO_00454 PF03447 Homoserine dehydrogenase, NAD binding domain AURMO_00454 PF00742 Homoserine dehydrogenase AURMO_00454 PF01842 ACT domain AURMO_00455 PF00291 Pyridoxal-phosphate dependent enzyme AURMO_00456 PF08544 GHMP kinases C terminal AURMO_00456 PF00288 GHMP kinases N terminal domain AURMO_00458 PF07497 Rho termination factor, RNA-binding domain AURMO_00458 PF07498 Rho termination factor, N-terminal domain AURMO_00458 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AURMO_00459 PF03462 PCRF domain AURMO_00459 PF00472 RF-1 domain AURMO_00460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AURMO_00462 PF00535 Glycosyl transferase family 2 AURMO_00463 PF06426 Serine acetyltransferase, N-terminal AURMO_00463 PF00132 Bacterial transferase hexapeptide (six repeats) AURMO_00465 PF00291 Pyridoxal-phosphate dependent enzyme AURMO_00466 PF17827 PrmC N-terminal domain AURMO_00466 PF13649 Methyltransferase domain AURMO_00468 PF01300 Telomere recombination AURMO_00469 PF00953 Glycosyl transferase family 4 AURMO_00471 PF13784 Fic/DOC family N-terminal AURMO_00471 PF02661 Fic/DOC family AURMO_00472 PF00119 ATP synthase A chain AURMO_00473 PF00137 ATP synthase subunit C AURMO_00474 PF00430 ATP synthase B/B' CF(0) AURMO_00475 PF00213 ATP synthase delta (OSCP) subunit AURMO_00476 PF02874 ATP synthase alpha/beta family, beta-barrel domain AURMO_00476 PF00306 ATP synthase alpha/beta chain, C terminal domain AURMO_00476 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AURMO_00477 PF00231 ATP synthase AURMO_00478 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AURMO_00478 PF02874 ATP synthase alpha/beta family, beta-barrel domain AURMO_00479 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AURMO_00480 PF03883 Peroxide stress protein YaaA AURMO_00482 PF00437 Type II/IV secretion system protein AURMO_00490 PF00202 Aminotransferase class-III AURMO_00491 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AURMO_00491 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AURMO_00491 PF13288 DXP reductoisomerase C-terminal domain AURMO_00492 PF17820 PDZ domain AURMO_00492 PF02163 Peptidase family M50 AURMO_00493 PF04551 GcpE protein AURMO_00496 PF03129 Anticodon binding domain AURMO_00496 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AURMO_00496 PF04073 Aminoacyl-tRNA editing domain AURMO_00497 PF13184 NusA-like KH domain AURMO_00497 PF08529 NusA N-terminal domain AURMO_00499 PF11987 Translation-initiation factor 2 AURMO_00499 PF04760 Translation initiation factor IF-2, N-terminal region AURMO_00499 PF00009 Elongation factor Tu GTP binding domain AURMO_00500 PF02033 Ribosome-binding factor A AURMO_00502 PF00730 HhH-GPD superfamily base excision DNA repair protein AURMO_00502 PF00633 Helix-hairpin-helix motif AURMO_00506 PF00005 ABC transporter AURMO_00507 PF18075 FtsX extracellular domain AURMO_00507 PF02687 FtsX-like permease family AURMO_00508 PF01668 SmpB protein AURMO_00512 PF00255 Glutathione peroxidase AURMO_00515 PF00459 Inositol monophosphatase family AURMO_00517 PF00753 Metallo-beta-lactamase superfamily AURMO_00517 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AURMO_00517 PF10996 Beta-Casp domain AURMO_00519 PF00491 Arginase family AURMO_00520 PF01979 Amidohydrolase family AURMO_00521 PF17391 Urocanase N-terminal domain AURMO_00521 PF01175 Urocanase Rossmann-like domain AURMO_00521 PF17392 Urocanase C-terminal domain AURMO_00522 PF00221 Aromatic amino acid lyase AURMO_00524 PF00893 Small Multidrug Resistance protein AURMO_00527 PF13460 NAD(P)H-binding AURMO_00527 PF11066 Protein of unknown function (DUF2867) AURMO_00529 PF00403 Heavy-metal-associated domain AURMO_00532 PF00176 SNF2 family N-terminal domain AURMO_00532 PF00271 Helicase conserved C-terminal domain AURMO_00532 PF04434 SWIM zinc finger AURMO_00534 PF12697 Alpha/beta hydrolase family AURMO_00535 PF01384 Phosphate transporter family AURMO_00537 PF00860 Permease family AURMO_00541 PF00595 PDZ domain AURMO_00546 PF12705 PD-(D/E)XK nuclease superfamily AURMO_00546 PF13361 UvrD-like helicase C-terminal domain AURMO_00546 PF00580 UvrD/REP helicase N-terminal domain AURMO_00547 PF00580 UvrD/REP helicase N-terminal domain AURMO_00547 PF13361 UvrD-like helicase C-terminal domain AURMO_00549 PF09297 NADH pyrophosphatase zinc ribbon domain AURMO_00549 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AURMO_00549 PF00293 NUDIX domain AURMO_00550 PF13361 UvrD-like helicase C-terminal domain AURMO_00550 PF00570 HRDC domain AURMO_00550 PF00580 UvrD/REP helicase N-terminal domain AURMO_00553 PF05362 Lon protease (S16) C-terminal proteolytic domain AURMO_00553 PF13180 PDZ domain AURMO_00554 PF03699 Uncharacterised protein family (UPF0182) AURMO_00555 PF01654 Cytochrome bd terminal oxidase subunit I AURMO_00556 PF02322 Cytochrome bd terminal oxidase subunit II AURMO_00557 PF00664 ABC transporter transmembrane region AURMO_00557 PF00005 ABC transporter AURMO_00558 PF00005 ABC transporter AURMO_00558 PF00664 ABC transporter transmembrane region AURMO_00560 PF00472 RF-1 domain AURMO_00560 PF03462 PCRF domain AURMO_00561 PF01261 Xylose isomerase-like TIM barrel AURMO_00562 PF00920 Dehydratase family AURMO_00563 PF00205 Thiamine pyrophosphate enzyme, central domain AURMO_00563 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AURMO_00563 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AURMO_00564 PF10369 Small subunit of acetolactate synthase AURMO_00565 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AURMO_00565 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AURMO_00568 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AURMO_00568 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AURMO_00568 PF01842 ACT domain AURMO_00569 PF00180 Isocitrate/isopropylmalate dehydrogenase AURMO_00570 PF01063 Amino-transferase class IV AURMO_00571 PF00749 tRNA synthetases class I (E and Q), catalytic domain AURMO_00573 PF00781 Diacylglycerol kinase catalytic domain AURMO_00575 PF03741 Integral membrane protein TerC family AURMO_00576 PF00330 Aconitase family (aconitate hydratase) AURMO_00577 PF00694 Aconitase C-terminal domain AURMO_00578 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AURMO_00579 PF01553 Acyltransferase AURMO_00580 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AURMO_00580 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AURMO_00581 PF07478 D-ala D-ala ligase C-terminus AURMO_00581 PF01820 D-ala D-ala ligase N-terminus AURMO_00583 PF00586 AIR synthase related protein, N-terminal domain AURMO_00583 PF02769 AIR synthase related protein, C-terminal domain AURMO_00585 PF17191 RecG wedge domain AURMO_00585 PF00271 Helicase conserved C-terminal domain AURMO_00585 PF00270 DEAD/DEAH box helicase AURMO_00586 PF01467 Cytidylyltransferase-like AURMO_00587 PF02881 SRP54-type protein, helical bundle domain AURMO_00587 PF00448 SRP54-type protein, GTPase domain AURMO_00588 PF02978 Signal peptide binding domain AURMO_00588 PF02881 SRP54-type protein, helical bundle domain AURMO_00588 PF00448 SRP54-type protein, GTPase domain AURMO_00589 PF01641 SelR domain AURMO_00591 PF00886 Ribosomal protein S16 AURMO_00593 PF01782 RimM N-terminal domain AURMO_00594 PF01746 tRNA (Guanine-1)-methyltransferase AURMO_00595 PF01245 Ribosomal protein L19 AURMO_00596 PF10502 Signal peptidase, peptidase S26 AURMO_00597 PF01351 Ribonuclease HII AURMO_00598 PF10611 Protein of unknown function (DUF2469) AURMO_00600 PF02899 Phage integrase, N-terminal SAM-like domain AURMO_00600 PF00589 Phage integrase family AURMO_00601 PF02254 TrkA-N domain AURMO_00601 PF00999 Sodium/hydrogen exchanger family AURMO_00606 PF02511 Thymidylate synthase complementing protein AURMO_00607 PF00701 Dihydrodipicolinate synthetase family AURMO_00608 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AURMO_00608 PF17770 Ribonuclease J C-terminal domain AURMO_00608 PF12706 Beta-lactamase superfamily domain AURMO_00609 PF00356 Bacterial regulatory proteins, lacI family AURMO_00611 PF00528 Binding-protein-dependent transport system inner membrane component AURMO_00612 PF00528 Binding-protein-dependent transport system inner membrane component AURMO_00613 PF00128 Alpha amylase, catalytic domain AURMO_00614 PF09397 Ftsk gamma domain AURMO_00614 PF01580 FtsK/SpoIIIE family AURMO_00614 PF17854 FtsK alpha domain AURMO_00616 PF18146 Damage-inducible protein CinA KH domain AURMO_00616 PF00994 Probable molybdopterin binding domain AURMO_00616 PF02464 Competence-damaged protein AURMO_00619 PF00154 recA bacterial DNA recombination protein AURMO_00620 PF02631 RecX family AURMO_00622 PF00919 Uncharacterized protein family UPF0004 AURMO_00622 PF04055 Radical SAM superfamily AURMO_00624 PF01678 Diaminopimelate epimerase AURMO_00626 PF05175 Methyltransferase small domain AURMO_00629 PF16360 GTP-binding GTPase Middle Region AURMO_00629 PF13167 GTP-binding GTPase N-terminal AURMO_00629 PF01926 50S ribosome-binding GTPase AURMO_00632 PF01063 Amino-transferase class IV AURMO_00633 PF04715 Anthranilate synthase component I, N terminal region AURMO_00633 PF00425 chorismate binding enzyme AURMO_00633 PF00117 Glutamine amidotransferase class-I AURMO_00634 PF08264 Anticodon-binding domain of tRNA AURMO_00634 PF13603 Leucyl-tRNA synthetase, Domain 2 AURMO_00634 PF00133 tRNA synthetases class I (I, L, M and V) AURMO_00634 PF09334 tRNA synthetases class I (M) AURMO_00635 PF03793 PASTA domain AURMO_00635 PF00069 Protein kinase domain AURMO_00638 PF00348 Polyprenyl synthetase AURMO_00641 PF02381 MraZ protein, putative antitoxin-like AURMO_00642 PF01795 MraW methylase family AURMO_00644 PF00905 Penicillin binding protein transpeptidase domain AURMO_00644 PF03717 Penicillin-binding Protein dimerisation domain AURMO_00645 PF01225 Mur ligase family, catalytic domain AURMO_00645 PF02875 Mur ligase family, glutamate ligase domain AURMO_00645 PF08245 Mur ligase middle domain AURMO_00646 PF01225 Mur ligase family, catalytic domain AURMO_00646 PF02875 Mur ligase family, glutamate ligase domain AURMO_00646 PF08245 Mur ligase middle domain AURMO_00647 PF00953 Glycosyl transferase family 4 AURMO_00648 PF02875 Mur ligase family, glutamate ligase domain AURMO_00648 PF08245 Mur ligase middle domain AURMO_00649 PF01098 Cell cycle protein AURMO_00650 PF04101 Glycosyltransferase family 28 C-terminal domain AURMO_00650 PF03033 Glycosyltransferase family 28 N-terminal domain AURMO_00651 PF08245 Mur ligase middle domain AURMO_00651 PF02875 Mur ligase family, glutamate ligase domain AURMO_00651 PF01225 Mur ligase family, catalytic domain AURMO_00653 PF00091 Tubulin/FtsZ family, GTPase domain AURMO_00653 PF12327 FtsZ family, C-terminal domain AURMO_00654 PF01168 Alanine racemase, N-terminal domain AURMO_00655 PF04472 Cell division protein SepF AURMO_00657 PF05103 DivIVA protein AURMO_00658 PF01252 Signal peptidase (SPase) II AURMO_00659 PF00849 RNA pseudouridylate synthase AURMO_00660 PF03668 P-loop ATPase protein family AURMO_00661 PF02650 WhiA C-terminal HTH domain AURMO_00661 PF14527 WhiA LAGLIDADG-like domain AURMO_00661 PF10298 WhiA N-terminal LAGLIDADG-like domain AURMO_00662 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AURMO_00662 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AURMO_00663 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AURMO_00663 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AURMO_00664 PF00162 Phosphoglycerate kinase AURMO_00665 PF00121 Triosephosphate isomerase AURMO_00666 PF03840 Preprotein translocase SecG subunit AURMO_00668 PF13419 Haloacid dehalogenase-like hydrolase AURMO_00669 PF00665 Integrase core domain AURMO_00670 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AURMO_00672 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AURMO_00672 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AURMO_00674 PF00923 Transaldolase/Fructose-6-phosphate aldolase AURMO_00675 PF02779 Transketolase, pyrimidine binding domain AURMO_00675 PF02780 Transketolase, C-terminal domain AURMO_00675 PF00456 Transketolase, thiamine diphosphate binding domain AURMO_00676 PF01040 UbiA prenyltransferase family AURMO_00677 PF02628 Cytochrome oxidase assembly protein AURMO_00678 PF01458 Uncharacterized protein family (UPF0051) AURMO_00679 PF01458 Uncharacterized protein family (UPF0051) AURMO_00680 PF00355 Rieske [2Fe-2S] domain AURMO_00681 PF00005 ABC transporter AURMO_00682 PF01883 Iron-sulfur cluster assembly protein AURMO_00683 PF01053 Cys/Met metabolism PLP-dependent enzyme AURMO_00684 PF02632 BioY family AURMO_00685 PF00005 ABC transporter AURMO_00685 PF16326 ABC transporter C-terminal domain AURMO_00685 PF12848 ABC transporter AURMO_00686 PF03458 UPF0126 domain AURMO_00687 PF11967 Recombination protein O N terminal AURMO_00687 PF02565 Recombination protein O C terminal AURMO_00688 PF01255 Putative undecaprenyl diphosphate synthase AURMO_00691 PF01207 Dihydrouridine synthase (Dus) AURMO_00692 PF13286 Phosphohydrolase-associated domain AURMO_00692 PF01966 HD domain AURMO_00693 PF13662 Toprim domain AURMO_00693 PF08275 DNA primase catalytic core, N-terminal domain AURMO_00693 PF01807 CHC2 zinc finger AURMO_00693 PF08278 DNA primase DnaG DnaB-binding AURMO_00693 PF10410 DnaB-helicase binding domain of primase AURMO_00694 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AURMO_00698 PF01327 Polypeptide deformylase AURMO_00700 PF13439 Glycosyltransferase Family 4 AURMO_00700 PF00534 Glycosyl transferases group 1 AURMO_00711 PF00239 Resolvase, N terminal domain AURMO_00711 PF02796 Helix-turn-helix domain of resolvase AURMO_00713 PF14659 Phage integrase, N-terminal SAM-like domain AURMO_00713 PF00589 Phage integrase family AURMO_00714 PF00041 Fibronectin type III domain AURMO_00714 PF00704 Glycosyl hydrolases family 18 AURMO_00719 PF13276 HTH-like domain AURMO_00719 PF13333 Integrase core domain AURMO_00719 PF00665 Integrase core domain AURMO_00720 PF02801 Beta-ketoacyl synthase, C-terminal domain AURMO_00720 PF00109 Beta-ketoacyl synthase, N-terminal domain AURMO_00721 PF00550 Phosphopantetheine attachment site AURMO_00722 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AURMO_00722 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AURMO_00723 PF00698 Acyl transferase domain AURMO_00724 PF17853 GGDEF-like domain AURMO_00724 PF13556 PucR C-terminal helix-turn-helix domain AURMO_00725 PF17831 Pyruvate dehydrogenase E1 component middle domain AURMO_00725 PF00456 Transketolase, thiamine diphosphate binding domain AURMO_00726 PF00578 AhpC/TSA family AURMO_00729 PF01784 NIF3 (NGG1p interacting factor 3) AURMO_00731 PF13456 Reverse transcriptase-like AURMO_00731 PF00300 Histidine phosphatase superfamily (branch 1) AURMO_00732 PF00480 ROK family AURMO_00733 PF00557 Metallopeptidase family M24 AURMO_00735 PF00665 Integrase core domain AURMO_00736 PF02548 Ketopantoate hydroxymethyltransferase AURMO_00737 PF02540 NAD synthase AURMO_00737 PF00795 Carbon-nitrogen hydrolase AURMO_00738 PF03951 Glutamine synthetase, beta-Grasp domain AURMO_00738 PF00120 Glutamine synthetase, catalytic domain AURMO_00739 PF03710 Glutamate-ammonia ligase adenylyltransferase AURMO_00739 PF08335 GlnD PII-uridylyltransferase AURMO_00740 PF00120 Glutamine synthetase, catalytic domain AURMO_00740 PF03951 Glutamine synthetase, beta-Grasp domain AURMO_00742 PF13829 Domain of unknown function (DUF4191) AURMO_00743 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AURMO_00743 PF04055 Radical SAM superfamily AURMO_00744 PF03099 Biotin/lipoate A/B protein ligase family AURMO_00746 PF00364 Biotin-requiring enzyme AURMO_00746 PF02817 e3 binding domain AURMO_00746 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AURMO_00747 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURMO_00747 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AURMO_00748 PF02789 Cytosol aminopeptidase family, N-terminal domain AURMO_00748 PF00883 Cytosol aminopeptidase family, catalytic domain AURMO_00750 PF04542 Sigma-70 region 2 AURMO_00750 PF04539 Sigma-70 region 3 AURMO_00750 PF04545 Sigma-70, region 4 AURMO_00750 PF00140 Sigma-70 factor, region 1.2 AURMO_00751 PF00665 Integrase core domain AURMO_00751 PF13936 Helix-turn-helix domain AURMO_00753 PF00986 DNA gyrase B subunit, carboxyl terminus AURMO_00753 PF00204 DNA gyrase B AURMO_00753 PF01751 Toprim domain AURMO_00753 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURMO_00754 PF03989 DNA gyrase C-terminal domain, beta-propeller AURMO_00754 PF00521 DNA gyrase/topoisomerase IV, subunit A AURMO_00756 PF11268 Protein of unknown function (DUF3071) AURMO_00759 PF00692 dUTPase AURMO_00762 PF00694 Aconitase C-terminal domain AURMO_00762 PF00330 Aconitase family (aconitate hydratase) AURMO_00763 PF02779 Transketolase, pyrimidine binding domain AURMO_00763 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AURMO_00763 PF02780 Transketolase, C-terminal domain AURMO_00764 PF00378 Enoyl-CoA hydratase/isomerase AURMO_00764 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AURMO_00764 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AURMO_00765 PF02803 Thiolase, C-terminal domain AURMO_00765 PF00108 Thiolase, N-terminal domain AURMO_00769 PF02657 Fe-S metabolism associated domain AURMO_00770 PF00581 Rhodanese-like domain AURMO_00772 PF00909 Ammonium Transporter Family AURMO_00773 PF00909 Ammonium Transporter Family AURMO_00777 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AURMO_00777 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AURMO_00777 PF03129 Anticodon binding domain AURMO_00778 PF01230 HIT domain AURMO_00779 PF01680 SOR/SNZ family AURMO_00780 PF01174 SNO glutamine amidotransferase family AURMO_00781 PF01709 Transcriptional regulator AURMO_00782 PF02075 Crossover junction endodeoxyribonuclease RuvC AURMO_00783 PF07499 RuvA, C-terminal domain AURMO_00783 PF01330 RuvA N terminal domain AURMO_00784 PF17864 RuvB AAA lid domain AURMO_00784 PF05491 RuvB C-terminal winged helix domain AURMO_00784 PF05496 Holliday junction DNA helicase RuvB P-loop domain AURMO_00786 PF07549 SecD/SecF GG Motif AURMO_00786 PF02355 Protein export membrane protein AURMO_00787 PF07549 SecD/SecF GG Motif AURMO_00787 PF02355 Protein export membrane protein AURMO_00788 PF02824 TGS domain AURMO_00788 PF13291 ACT domain AURMO_00788 PF04607 Region found in RelA / SpoT proteins AURMO_00791 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AURMO_00792 PF16193 AAA C-terminal domain AURMO_00792 PF00004 ATPase family associated with various cellular activities (AAA) AURMO_00792 PF12002 MgsA AAA+ ATPase C terminal AURMO_00793 PF01479 S4 domain AURMO_00793 PF00163 Ribosomal protein S4/S9 N-terminal domain AURMO_00795 PF02272 DHHA1 domain AURMO_00795 PF01411 tRNA synthetases class II (A) AURMO_00795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AURMO_00796 PF03652 Holliday junction resolvase AURMO_00798 PF08501 Shikimate dehydrogenase substrate binding domain AURMO_00798 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AURMO_00799 PF01264 Chorismate synthase AURMO_00800 PF01202 Shikimate kinase AURMO_00801 PF01761 3-dehydroquinate synthase AURMO_00802 PF01220 Dehydroquinase class II AURMO_00803 PF01132 Elongation factor P (EF-P) OB domain AURMO_00803 PF08207 Elongation factor P (EF-P) KOW-like domain AURMO_00803 PF09285 Elongation factor P, C-terminal AURMO_00804 PF01029 NusB family AURMO_00805 PF00156 Phosphoribosyl transferase domain AURMO_00806 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AURMO_00806 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AURMO_00807 PF01979 Amidohydrolase family AURMO_00809 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AURMO_00809 PF00117 Glutamine amidotransferase class-I AURMO_00810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AURMO_00810 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AURMO_00810 PF02142 MGS-like domain AURMO_00811 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AURMO_00812 PF00625 Guanylate kinase AURMO_00813 PF01192 RNA polymerase Rpb6 AURMO_00814 PF04127 DNA / pantothenate metabolism flavoprotein AURMO_00814 PF02441 Flavoprotein AURMO_00815 PF00438 S-adenosylmethionine synthetase, N-terminal domain AURMO_00815 PF02772 S-adenosylmethionine synthetase, central domain AURMO_00815 PF02773 S-adenosylmethionine synthetase, C-terminal domain AURMO_00816 PF17764 3′ DNA-binding domain (3′BD) AURMO_00817 PF02911 Formyl transferase, C-terminal domain AURMO_00817 PF00551 Formyl transferase AURMO_00818 PF01189 16S rRNA methyltransferase RsmB/F AURMO_00818 PF01029 NusB family AURMO_00819 PF00834 Ribulose-phosphate 3 epimerase family AURMO_00820 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AURMO_00821 PF01634 ATP phosphoribosyltransferase AURMO_00821 PF08029 HisG, C-terminal domain AURMO_00822 PF00977 Histidine biosynthesis protein AURMO_00823 PF01502 Phosphoribosyl-AMP cyclohydrolase AURMO_00824 PF00425 chorismate binding enzyme AURMO_00824 PF04715 Anthranilate synthase component I, N terminal region AURMO_00827 PF00218 Indole-3-glycerol phosphate synthase AURMO_00828 PF00291 Pyridoxal-phosphate dependent enzyme AURMO_00829 PF00290 Tryptophan synthase alpha chain AURMO_00830 PF01790 Prolipoprotein diacylglyceryl transferase AURMO_00831 PF00310 Glutamine amidotransferases class-II AURMO_00831 PF04898 Glutamate synthase central domain AURMO_00831 PF01645 Conserved region in glutamate synthase AURMO_00831 PF01493 GXGXG motif AURMO_00832 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AURMO_00832 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURMO_00833 PF02887 Pyruvate kinase, alpha/beta domain AURMO_00833 PF00224 Pyruvate kinase, barrel domain AURMO_00835 PF00072 Response regulator receiver domain AURMO_00835 PF03861 ANTAR domain AURMO_00836 PF03061 Thioesterase superfamily AURMO_00837 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AURMO_00837 PF01367 5'-3' exonuclease, C-terminal SAM fold AURMO_00837 PF00476 DNA polymerase family A AURMO_00838 PF00575 S1 RNA binding domain AURMO_00839 PF01121 Dephospho-CoA kinase AURMO_00840 PF12344 Ultra-violet resistance protein B AURMO_00840 PF02151 UvrB/uvrC motif AURMO_00840 PF04851 Type III restriction enzyme, res subunit AURMO_00840 PF17757 UvrB interaction domain AURMO_00840 PF00271 Helicase conserved C-terminal domain AURMO_00841 PF00005 ABC transporter AURMO_00841 PF17755 UvrA DNA-binding domain AURMO_00841 PF17760 UvrA interaction domain AURMO_00842 PF08459 UvrC Helix-hairpin-helix N-terminal AURMO_00842 PF02151 UvrB/uvrC motif AURMO_00842 PF01541 GIY-YIG catalytic domain AURMO_00843 PF03009 Glycerophosphoryl diester phosphodiesterase family AURMO_00845 PF00293 NUDIX domain AURMO_00849 PF00892 EamA-like transporter family AURMO_00850 PF07690 Major Facilitator Superfamily AURMO_00851 PF07690 Major Facilitator Superfamily AURMO_00852 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AURMO_00852 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AURMO_00853 PF02885 Glycosyl transferase family, helical bundle domain AURMO_00853 PF00591 Glycosyl transferase family, a/b domain AURMO_00854 PF00510 Cytochrome c oxidase subunit III AURMO_00855 PF00034 Cytochrome c AURMO_00855 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AURMO_00856 PF00355 Rieske [2Fe-2S] domain AURMO_00857 PF13631 Cytochrome b(N-terminal)/b6/petB AURMO_00860 PF00115 Cytochrome C and Quinol oxidase polypeptide I AURMO_00861 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AURMO_00862 PF01521 Iron-sulphur cluster biosynthesis AURMO_00863 PF01546 Peptidase family M20/M25/M40 AURMO_00863 PF07687 Peptidase dimerisation domain AURMO_00865 PF01180 Dihydroorotate dehydrogenase AURMO_00866 PF03477 ATP cone domain AURMO_00867 PF00815 Histidinol dehydrogenase AURMO_00868 PF02811 PHP domain AURMO_00868 PF07733 Bacterial DNA polymerase III alpha NTPase domain AURMO_00868 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AURMO_00868 PF14579 Helix-hairpin-helix motif AURMO_00869 PF00795 Carbon-nitrogen hydrolase AURMO_00869 PF00535 Glycosyl transferase family 2 AURMO_00870 PF00270 DEAD/DEAH box helicase AURMO_00870 PF08148 DSHCT (NUC185) domain AURMO_00870 PF00271 Helicase conserved C-terminal domain AURMO_00871 PF00902 Sec-independent protein translocase protein (TatC) AURMO_00872 PF02416 mttA/Hcf106 family AURMO_00874 PF13280 WYL domain AURMO_00875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AURMO_00875 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AURMO_00876 PF08704 tRNA methyltransferase complex GCD14 subunit AURMO_00877 PF13419 Haloacid dehalogenase-like hydrolase AURMO_00879 PF02673 Bacitracin resistance protein BacA AURMO_00882 PF04851 Type III restriction enzyme, res subunit AURMO_00883 PF00588 SpoU rRNA Methylase family AURMO_00884 PF02146 Sir2 family AURMO_00885 PF00534 Glycosyl transferases group 1 AURMO_00885 PF13439 Glycosyltransferase Family 4 AURMO_00888 PF01197 Ribosomal protein L31 AURMO_00889 PF00005 ABC transporter AURMO_00890 PF13439 Glycosyltransferase Family 4 AURMO_00890 PF00534 Glycosyl transferases group 1 AURMO_00891 PF00483 Nucleotidyl transferase AURMO_00895 PF02104 SURF1 family AURMO_00896 PF08502 LeuA allosteric (dimerisation) domain AURMO_00896 PF00682 HMGL-like AURMO_00897 PF07650 KH domain AURMO_00897 PF01926 50S ribosome-binding GTPase AURMO_00898 PF00571 CBS domain AURMO_00898 PF01595 Cyclin M transmembrane N-terminal domain AURMO_00898 PF03471 Transporter associated domain AURMO_00899 PF02130 Uncharacterized protein family UPF0054 AURMO_00900 PF02562 PhoH-like protein AURMO_00901 PF01230 HIT domain AURMO_00903 PF00684 DnaJ central domain AURMO_00903 PF01556 DnaJ C terminal domain AURMO_00903 PF00226 DnaJ domain AURMO_00904 PF01628 HrcA protein C terminal domain AURMO_00905 PF04055 Radical SAM superfamily AURMO_00907 PF00679 Elongation factor G C-terminus AURMO_00907 PF06421 GTP-binding protein LepA C-terminus AURMO_00907 PF00009 Elongation factor Tu GTP binding domain AURMO_00908 PF01649 Ribosomal protein S20 AURMO_00911 PF03120 NAD-dependent DNA ligase OB-fold domain AURMO_00911 PF00533 BRCA1 C Terminus (BRCT) domain AURMO_00911 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AURMO_00911 PF12826 Helix-hairpin-helix motif AURMO_00911 PF01653 NAD-dependent DNA ligase adenylation domain AURMO_00912 PF06081 Aromatic acid exporter family member 1 AURMO_00913 PF00933 Glycosyl hydrolase family 3 N terminal domain AURMO_00913 PF01915 Glycosyl hydrolase family 3 C-terminal domain AURMO_00915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURMO_00915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AURMO_00917 PF00005 ABC transporter AURMO_00917 PF17912 MalK OB fold domain AURMO_00919 PF08240 Alcohol dehydrogenase GroES-like domain AURMO_00919 PF00107 Zinc-binding dehydrogenase AURMO_00920 PF08274 PhnA Zinc-Ribbon AURMO_00920 PF03831 PhnA domain AURMO_00921 PF02502 Ribose/Galactose Isomerase AURMO_00925 PF01467 Cytidylyltransferase-like AURMO_00927 PF00171 Aldehyde dehydrogenase family AURMO_00928 PF00696 Amino acid kinase family AURMO_00929 PF01018 GTP1/OBG AURMO_00929 PF09269 Domain of unknown function (DUF1967) AURMO_00929 PF01926 50S ribosome-binding GTPase AURMO_00930 PF01016 Ribosomal L27 protein AURMO_00931 PF00829 Ribosomal prokaryotic L21 protein AURMO_00932 PF10150 Ribonuclease E/G family AURMO_00934 PF07690 Major Facilitator Superfamily AURMO_00935 PF00334 Nucleoside diphosphate kinase AURMO_00937 PF08245 Mur ligase middle domain AURMO_00937 PF02875 Mur ligase family, glutamate ligase domain AURMO_00938 PF00133 tRNA synthetases class I (I, L, M and V) AURMO_00938 PF08264 Anticodon-binding domain of tRNA AURMO_00939 PF08264 Anticodon-binding domain of tRNA AURMO_00939 PF00133 tRNA synthetases class I (I, L, M and V) AURMO_00943 PF13276 HTH-like domain AURMO_00943 PF00665 Integrase core domain AURMO_00943 PF13333 Integrase core domain AURMO_00944 PF00085 Thioredoxin AURMO_00948 PF00324 Amino acid permease AURMO_00949 PF01474 Class-II DAHP synthetase family AURMO_00950 PF01553 Acyltransferase AURMO_00951 PF00480 ROK family AURMO_00952 PF00501 AMP-binding enzyme AURMO_00953 PF01327 Polypeptide deformylase AURMO_00954 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AURMO_00955 PF00289 Biotin carboxylase, N-terminal domain AURMO_00955 PF02785 Biotin carboxylase C-terminal domain AURMO_00955 PF00364 Biotin-requiring enzyme AURMO_00955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AURMO_00955 PF00682 HMGL-like AURMO_00955 PF02436 Conserved carboxylase domain AURMO_00956 PF13614 AAA domain AURMO_00957 PF13411 MerR HTH family regulatory protein AURMO_00958 PF00376 MerR family regulatory protein AURMO_00959 PF00498 FHA domain AURMO_00960 PF00271 Helicase conserved C-terminal domain AURMO_00960 PF00270 DEAD/DEAH box helicase AURMO_00962 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AURMO_00963 PF00892 EamA-like transporter family AURMO_00964 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AURMO_00964 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AURMO_00966 PF00892 EamA-like transporter family AURMO_00968 PF01810 LysE type translocator AURMO_00969 PF03928 Haem-degrading AURMO_00970 PF01042 Endoribonuclease L-PSP AURMO_00971 PF00484 Carbonic anhydrase AURMO_00972 PF07690 Major Facilitator Superfamily AURMO_00973 PF01979 Amidohydrolase family AURMO_00975 PF05977 Transmembrane secretion effector AURMO_00978 PF00293 NUDIX domain AURMO_00979 PF01926 50S ribosome-binding GTPase AURMO_00979 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AURMO_00980 PF02224 Cytidylate kinase AURMO_00981 PF02153 Prephenate dehydrogenase AURMO_00982 PF01479 S4 domain AURMO_00982 PF00849 RNA pseudouridylate synthase AURMO_00983 PF04079 Segregation and condensation complex subunit ScpB AURMO_00984 PF02616 Segregation and condensation protein ScpA AURMO_00985 PF13614 AAA domain AURMO_00986 PF02899 Phage integrase, N-terminal SAM-like domain AURMO_00986 PF00589 Phage integrase family AURMO_00987 PF00293 NUDIX domain AURMO_00988 PF06418 CTP synthase N-terminus AURMO_00988 PF00117 Glutamine amidotransferase class-I AURMO_00989 PF02463 RecF/RecN/SMC N terminal domain AURMO_00990 PF01513 ATP-NAD kinase AURMO_00991 PF01479 S4 domain AURMO_00991 PF01728 FtsJ-like methyltransferase AURMO_00993 PF00285 Citrate synthase, C-terminal domain AURMO_00995 PF03972 MmgE/PrpD family AURMO_00996 PF07729 FCD domain AURMO_00996 PF00392 Bacterial regulatory proteins, gntR family AURMO_00997 PF16177 Acetyl-coenzyme A synthetase N-terminus AURMO_00997 PF00501 AMP-binding enzyme AURMO_00997 PF13193 AMP-binding enzyme C-terminal domain AURMO_00999 PF00474 Sodium:solute symporter family AURMO_01000 PF00665 Integrase core domain AURMO_01000 PF13333 Integrase core domain AURMO_01000 PF13276 HTH-like domain AURMO_01007 PF00579 tRNA synthetases class I (W and Y) AURMO_01008 PF14698 Argininosuccinate lyase C-terminal AURMO_01008 PF00206 Lyase AURMO_01009 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AURMO_01009 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AURMO_01010 PF00696 Amino acid kinase family AURMO_01011 PF01960 ArgJ family AURMO_01012 PF02774 Semialdehyde dehydrogenase, dimerisation domain AURMO_01012 PF01118 Semialdehyde dehydrogenase, NAD binding domain AURMO_01014 PF03147 Ferredoxin-fold anticodon binding domain AURMO_01014 PF03484 tRNA synthetase B5 domain AURMO_01014 PF03483 B3/4 domain AURMO_01014 PF01588 Putative tRNA binding domain AURMO_01014 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AURMO_01015 PF01409 tRNA synthetases class II core domain (F) AURMO_01015 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AURMO_01016 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AURMO_01018 PF08032 RNA 2'-O ribose methyltransferase substrate binding AURMO_01018 PF00588 SpoU rRNA Methylase family AURMO_01019 PF00453 Ribosomal protein L20 AURMO_01020 PF01632 Ribosomal protein L35 AURMO_01021 PF00707 Translation initiation factor IF-3, C-terminal domain AURMO_01021 PF05198 Translation initiation factor IF-3, N-terminal domain AURMO_01024 PF03176 MMPL family AURMO_01027 PF00977 Histidine biosynthesis protein AURMO_01028 PF00117 Glutamine amidotransferase class-I AURMO_01029 PF00475 Imidazoleglycerol-phosphate dehydratase AURMO_01030 PF00155 Aminotransferase class I and II AURMO_01032 PF00717 Peptidase S24-like AURMO_01032 PF01726 LexA DNA binding domain AURMO_01033 PF02219 Methylenetetrahydrofolate reductase AURMO_01034 PF06689 ClpX C4-type zinc finger AURMO_01034 PF07724 AAA domain (Cdc48 subfamily) AURMO_01034 PF10431 C-terminal, D2-small domain, of ClpB protein AURMO_01036 PF00574 Clp protease AURMO_01037 PF00574 Clp protease AURMO_01041 PF00665 Integrase core domain AURMO_01041 PF13936 Helix-turn-helix domain AURMO_01044 PF00072 Response regulator receiver domain AURMO_01044 PF00196 Bacterial regulatory proteins, luxR family AURMO_01047 PF05697 Bacterial trigger factor protein (TF) AURMO_01047 PF05698 Bacterial trigger factor protein (TF) C-terminus AURMO_01047 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AURMO_01050 PF00717 Peptidase S24-like AURMO_01051 PF11798 IMS family HHH motif AURMO_01051 PF00817 impB/mucB/samB family AURMO_01051 PF13438 Domain of unknown function (DUF4113) AURMO_01051 PF11799 impB/mucB/samB family C-terminal domain AURMO_01053 PF00528 Binding-protein-dependent transport system inner membrane component AURMO_01055 PF07969 Amidohydrolase family AURMO_01056 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AURMO_01056 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AURMO_01056 PF06827 Zinc finger found in FPG and IleRS AURMO_01057 PF02502 Ribose/Galactose Isomerase AURMO_01058 PF11838 ERAP1-like C-terminal domain AURMO_01058 PF01433 Peptidase family M1 domain AURMO_01059 PF00924 Mechanosensitive ion channel AURMO_01060 PF01152 Bacterial-like globin AURMO_01062 PF02551 Acyl-CoA thioesterase AURMO_01064 PF03061 Thioesterase superfamily AURMO_01065 PF12848 ABC transporter AURMO_01065 PF00005 ABC transporter AURMO_01067 PF00436 Single-strand binding protein family AURMO_01068 PF01625 Peptide methionine sulfoxide reductase AURMO_01073 PF00171 Aldehyde dehydrogenase family AURMO_01074 PF13276 HTH-like domain AURMO_01074 PF13333 Integrase core domain AURMO_01074 PF00665 Integrase core domain AURMO_01076 PF00929 Exonuclease AURMO_01081 PF02361 Cobalt transport protein AURMO_01082 PF00005 ABC transporter AURMO_01083 PF09819 ABC-type cobalt transport system, permease component AURMO_01086 PF02637 GatB domain AURMO_01086 PF02934 GatB/GatE catalytic domain AURMO_01087 PF01425 Amidase AURMO_01088 PF02686 Glu-tRNAGln amidotransferase C subunit AURMO_01089 PF00929 Exonuclease AURMO_01089 PF02811 PHP domain AURMO_01089 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AURMO_01089 PF07733 Bacterial DNA polymerase III alpha NTPase domain AURMO_01089 PF11490 DNA polymerase III polC-type N-terminus II AURMO_01089 PF14579 Helix-hairpin-helix motif AURMO_01090 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AURMO_01090 PF03120 NAD-dependent DNA ligase OB-fold domain AURMO_01090 PF01653 NAD-dependent DNA ligase adenylation domain AURMO_01090 PF12826 Helix-hairpin-helix motif AURMO_01090 PF00533 BRCA1 C Terminus (BRCT) domain AURMO_01092 PF00266 Aminotransferase class-V AURMO_01093 PF00128 Alpha amylase, catalytic domain AURMO_01093 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AURMO_01094 PF11896 Domain of unknown function (DUF3416) AURMO_01095 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AURMO_01095 PF02806 Alpha amylase, C-terminal all-beta domain AURMO_01095 PF00128 Alpha amylase, catalytic domain AURMO_01099 PF01594 AI-2E family transporter AURMO_01105 PF01765 Ribosome recycling factor AURMO_01106 PF00696 Amino acid kinase family AURMO_01107 PF00889 Elongation factor TS AURMO_01108 PF00318 Ribosomal protein S2 AURMO_01110 PF07690 Major Facilitator Superfamily AURMO_01113 PF05173 Dihydrodipicolinate reductase, C-terminus AURMO_01113 PF01113 Dihydrodipicolinate reductase, N-terminus AURMO_01115 PF05193 Peptidase M16 inactive domain AURMO_01115 PF00675 Insulinase (Peptidase family M16) AURMO_01116 PF00248 Aldo/keto reductase family AURMO_01117 PF00013 KH domain AURMO_01117 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AURMO_01117 PF00575 S1 RNA binding domain AURMO_01117 PF01138 3' exoribonuclease family, domain 1 AURMO_01118 PF00312 Ribosomal protein S15 AURMO_01122 PF02594 Uncharacterised ACR, YggU family COG1872 AURMO_01124 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AURMO_01127 PF00120 Glutamine synthetase, catalytic domain AURMO_01128 PF07722 Peptidase C26 AURMO_01129 PF00171 Aldehyde dehydrogenase family AURMO_01131 PF00392 Bacterial regulatory proteins, gntR family AURMO_01131 PF07729 FCD domain AURMO_01132 PF13520 Amino acid permease AURMO_01133 PF00248 Aldo/keto reductase family AURMO_01134 PF00156 Phosphoribosyl transferase domain AURMO_01135 PF00206 Lyase AURMO_01135 PF10415 Fumarase C C-terminus AURMO_01136 PF00171 Aldehyde dehydrogenase family AURMO_01137 PF00795 Carbon-nitrogen hydrolase AURMO_01138 PF06574 FAD synthetase AURMO_01138 PF01687 Riboflavin kinase AURMO_01141 PF01509 TruB family pseudouridylate synthase (N terminal domain) AURMO_01141 PF16198 tRNA pseudouridylate synthase B C-terminal domain AURMO_01141 PF09142 tRNA Pseudouridine synthase II, C terminal AURMO_01143 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AURMO_01143 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AURMO_01144 PF12538 DNA transporter AURMO_01144 PF01580 FtsK/SpoIIIE family AURMO_01148 PF17863 AAA lid domain AURMO_01148 PF07726 ATPase family associated with various cellular activities (AAA) AURMO_01150 PF00069 Protein kinase domain AURMO_01150 PF13191 AAA ATPase domain AURMO_01153 PF06470 SMC proteins Flexible Hinge Domain AURMO_01153 PF02463 RecF/RecN/SMC N terminal domain AURMO_01154 PF01614 Bacterial transcriptional regulator AURMO_01154 PF09339 IclR helix-turn-helix domain AURMO_01155 PF01168 Alanine racemase, N-terminal domain AURMO_01158 PF06827 Zinc finger found in FPG and IleRS AURMO_01158 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AURMO_01158 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AURMO_01159 PF14622 Ribonuclease-III-like AURMO_01159 PF00035 Double-stranded RNA binding motif AURMO_01160 PF01783 Ribosomal L32p protein family AURMO_01161 PF02620 Large ribosomal RNA subunit accumulation protein YceD AURMO_01164 PF09335 SNARE associated Golgi protein AURMO_01165 PF09335 SNARE associated Golgi protein AURMO_01166 PF02567 Phenazine biosynthesis-like protein AURMO_01168 PF01725 Ham1 family AURMO_01169 PF03725 3' exoribonuclease family, domain 2 AURMO_01169 PF01138 3' exoribonuclease family, domain 1 AURMO_01170 PF01177 Asp/Glu/Hydantoin racemase AURMO_01172 PF12804 MobA-like NTP transferase domain AURMO_01172 PF14602 Hexapeptide repeat of succinyl-transferase AURMO_01172 PF00132 Bacterial transferase hexapeptide (six repeats) AURMO_01173 PF01061 ABC-2 type transporter AURMO_01174 PF00005 ABC transporter AURMO_01175 PF02770 Acyl-CoA dehydrogenase, middle domain AURMO_01175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AURMO_01175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AURMO_01176 PF02515 CoA-transferase family III AURMO_01177 PF01266 FAD dependent oxidoreductase AURMO_01180 PF00271 Helicase conserved C-terminal domain AURMO_01180 PF00270 DEAD/DEAH box helicase AURMO_01183 PF02811 PHP domain AURMO_01184 PF00557 Metallopeptidase family M24 AURMO_01184 PF05195 Aminopeptidase P, N-terminal domain AURMO_01186 PF03466 LysR substrate binding domain AURMO_01186 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AURMO_01188 PF03448 MgtE intracellular N domain AURMO_01188 PF01769 Divalent cation transporter AURMO_01188 PF00571 CBS domain AURMO_01190 PF10609 NUBPL iron-transfer P-loop NTPase AURMO_01190 PF01883 Iron-sulfur cluster assembly protein AURMO_01191 PF00171 Aldehyde dehydrogenase family AURMO_01193 PF00202 Aminotransferase class-III AURMO_01194 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AURMO_01194 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AURMO_01195 PF03352 Methyladenine glycosylase AURMO_01197 PF02416 mttA/Hcf106 family AURMO_01198 PF01596 O-methyltransferase AURMO_01201 PF01546 Peptidase family M20/M25/M40 AURMO_01201 PF07687 Peptidase dimerisation domain AURMO_01202 PF14602 Hexapeptide repeat of succinyl-transferase AURMO_01202 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AURMO_01205 PF08240 Alcohol dehydrogenase GroES-like domain AURMO_01205 PF00107 Zinc-binding dehydrogenase AURMO_01207 PF00285 Citrate synthase, C-terminal domain AURMO_01208 PF00155 Aminotransferase class I and II AURMO_01209 PF00037 4Fe-4S binding domain AURMO_01219 PF02347 Glycine cleavage system P-protein AURMO_01220 PF01597 Glycine cleavage H-protein AURMO_01221 PF08669 Glycine cleavage T-protein C-terminal barrel domain AURMO_01221 PF01571 Aminomethyltransferase folate-binding domain AURMO_01224 PF02445 Quinolinate synthetase A protein AURMO_01225 PF00890 FAD binding domain AURMO_01225 PF02910 Fumarate reductase flavoprotein C-term AURMO_01226 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AURMO_01226 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AURMO_01227 PF00266 Aminotransferase class-V AURMO_01230 PF01554 MatE AURMO_01234 PF13333 Integrase core domain AURMO_01234 PF13276 HTH-like domain AURMO_01234 PF00665 Integrase core domain AURMO_01238 PF00106 short chain dehydrogenase AURMO_01240 PF01381 Helix-turn-helix AURMO_01242 PF06071 Protein of unknown function (DUF933) AURMO_01242 PF01926 50S ribosome-binding GTPase AURMO_01245 PF00171 Aldehyde dehydrogenase family AURMO_01246 PF02646 RmuC family AURMO_01248 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AURMO_01249 PF01116 Fructose-bisphosphate aldolase class-II AURMO_01251 PF00107 Zinc-binding dehydrogenase AURMO_01251 PF08240 Alcohol dehydrogenase GroES-like domain AURMO_01252 PF01232 Mannitol dehydrogenase Rossmann domain AURMO_01252 PF08125 Mannitol dehydrogenase C-terminal domain AURMO_01253 PF00528 Binding-protein-dependent transport system inner membrane component AURMO_01254 PF00528 Binding-protein-dependent transport system inner membrane component AURMO_01255 PF01547 Bacterial extracellular solute-binding protein AURMO_01257 PF02401 LytB protein AURMO_01258 PF13742 OB-fold nucleic acid binding domain AURMO_01258 PF02601 Exonuclease VII, large subunit AURMO_01259 PF02609 Exonuclease VII small subunit AURMO_01261 PF00484 Carbonic anhydrase AURMO_01262 PF00206 Lyase AURMO_01262 PF10415 Fumarase C C-terminus AURMO_01263 PF00248 Aldo/keto reductase family AURMO_01265 PF13276 HTH-like domain AURMO_01265 PF13333 Integrase core domain AURMO_01265 PF00665 Integrase core domain AURMO_01267 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AURMO_01268 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AURMO_01269 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AURMO_01270 PF04909 Amidohydrolase AURMO_01271 PF04909 Amidohydrolase AURMO_01272 PF04303 PrpF protein AURMO_01273 PF03737 Aldolase/RraA AURMO_01274 PF09339 IclR helix-turn-helix domain AURMO_01274 PF01614 Bacterial transcriptional regulator AURMO_01277 PF01614 Bacterial transcriptional regulator AURMO_01277 PF09339 IclR helix-turn-helix domain AURMO_01278 PF01494 FAD binding domain AURMO_01279 PF00171 Aldehyde dehydrogenase family AURMO_01281 PF00355 Rieske [2Fe-2S] domain AURMO_01282 PF00111 2Fe-2S iron-sulfur cluster binding domain AURMO_01282 PF00175 Oxidoreductase NAD-binding domain AURMO_01284 PF00171 Aldehyde dehydrogenase family AURMO_01285 PF00456 Transketolase, thiamine diphosphate binding domain AURMO_01286 PF02780 Transketolase, C-terminal domain AURMO_01286 PF02779 Transketolase, pyrimidine binding domain AURMO_01286 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AURMO_01287 PF00107 Zinc-binding dehydrogenase AURMO_01287 PF08240 Alcohol dehydrogenase GroES-like domain AURMO_01288 PF00005 ABC transporter AURMO_01289 PF02653 Branched-chain amino acid transport system / permease component AURMO_01292 PF01261 Xylose isomerase-like TIM barrel AURMO_01293 PF00365 Phosphofructokinase AURMO_01294 PF02426 Muconolactone delta-isomerase AURMO_01296 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AURMO_01298 PF00171 Aldehyde dehydrogenase family AURMO_01300 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURMO_01300 PF14759 Reductase C-terminal AURMO_01301 PF00111 2Fe-2S iron-sulfur cluster binding domain AURMO_01304 PF00550 Phosphopantetheine attachment site AURMO_01304 PF00391 PEP-utilising enzyme, mobile domain AURMO_01304 PF08241 Methyltransferase domain AURMO_01304 PF00668 Condensation domain AURMO_01304 PF00975 Thioesterase domain AURMO_01304 PF00501 AMP-binding enzyme AURMO_01304 PF13193 AMP-binding enzyme C-terminal domain AURMO_01305 PF00391 PEP-utilising enzyme, mobile domain AURMO_01305 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AURMO_01305 PF02896 PEP-utilising enzyme, TIM barrel domain AURMO_01306 PF00067 Cytochrome P450 AURMO_01307 PF01614 Bacterial transcriptional regulator AURMO_01307 PF09339 IclR helix-turn-helix domain AURMO_01311 PF03328 HpcH/HpaI aldolase/citrate lyase family AURMO_01312 PF00561 alpha/beta hydrolase fold AURMO_01314 PF13638 PIN domain AURMO_01314 PF02562 PhoH-like protein AURMO_01315 PF01255 Putative undecaprenyl diphosphate synthase AURMO_01316 PF02661 Fic/DOC family AURMO_01316 PF12728 Helix-turn-helix domain AURMO_01317 PF03006 Haemolysin-III related AURMO_01321 PF01272 Transcription elongation factor, GreA/GreB, C-term AURMO_01321 PF03449 Transcription elongation factor, N-terminal AURMO_01322 PF00291 Pyridoxal-phosphate dependent enzyme AURMO_01322 PF13291 ACT domain AURMO_01323 PF01435 Peptidase family M48 AURMO_01324 PF04011 LemA family AURMO_01326 PF00128 Alpha amylase, catalytic domain AURMO_01327 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AURMO_01328 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AURMO_01331 PF00082 Subtilase family AURMO_01334 PF00113 Enolase, C-terminal TIM barrel domain AURMO_01334 PF03952 Enolase, N-terminal domain AURMO_01335 PF13393 Histidyl-tRNA synthetase AURMO_01336 PF03819 MazG nucleotide pyrophosphohydrolase domain AURMO_01338 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AURMO_01338 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AURMO_01340 PF06965 Na+/H+ antiporter 1 AURMO_01341 PF00271 Helicase conserved C-terminal domain AURMO_01341 PF17757 UvrB interaction domain AURMO_01341 PF02559 CarD-like/TRCF domain AURMO_01341 PF00270 DEAD/DEAH box helicase AURMO_01341 PF03461 TRCF domain AURMO_01343 PF01195 Peptidyl-tRNA hydrolase AURMO_01344 PF14693 Ribosomal protein TL5, C-terminal domain AURMO_01344 PF01386 Ribosomal L25p family AURMO_01345 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AURMO_01345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AURMO_01346 PF00294 pfkB family carbohydrate kinase AURMO_01348 PF01850 PIN domain AURMO_01350 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AURMO_01350 PF14572 Phosphoribosyl synthetase-associated domain AURMO_01351 PF00132 Bacterial transferase hexapeptide (six repeats) AURMO_01351 PF12804 MobA-like NTP transferase domain AURMO_01359 PF00005 ABC transporter AURMO_01359 PF12848 ABC transporter AURMO_01359 PF16326 ABC transporter C-terminal domain AURMO_01360 PF00288 GHMP kinases N terminal domain AURMO_01360 PF08544 GHMP kinases C terminal AURMO_01361 PF00398 Ribosomal RNA adenine dimethylase AURMO_01362 PF01026 TatD related DNase AURMO_01363 PF08264 Anticodon-binding domain of tRNA AURMO_01363 PF09334 tRNA synthetases class I (M) AURMO_01366 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AURMO_01367 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AURMO_01367 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase AURMO_01368 PF03313 Serine dehydratase alpha chain AURMO_01368 PF03315 Serine dehydratase beta chain AURMO_01374 PF02583 Metal-sensitive transcriptional repressor AURMO_01376 PF14759 Reductase C-terminal AURMO_01376 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURMO_01378 PF07690 Major Facilitator Superfamily AURMO_01379 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AURMO_01379 PF11898 Domain of unknown function (DUF3418) AURMO_01379 PF00270 DEAD/DEAH box helicase AURMO_01379 PF04408 Helicase associated domain (HA2) AURMO_01379 PF00271 Helicase conserved C-terminal domain AURMO_01381 PF00268 Ribonucleotide reductase, small chain AURMO_01383 PF00317 Ribonucleotide reductase, all-alpha domain AURMO_01383 PF03477 ATP cone domain AURMO_01383 PF02867 Ribonucleotide reductase, barrel domain AURMO_01385 PF00155 Aminotransferase class I and II AURMO_01386 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AURMO_01386 PF01243 Pyridoxamine 5'-phosphate oxidase AURMO_01387 PF00106 short chain dehydrogenase AURMO_01388 PF00005 ABC transporter AURMO_01397 PF12849 PBP superfamily domain AURMO_01398 PF00528 Binding-protein-dependent transport system inner membrane component AURMO_01399 PF00528 Binding-protein-dependent transport system inner membrane component AURMO_01400 PF00069 Protein kinase domain AURMO_01400 PF03793 PASTA domain AURMO_01406 PF04055 Radical SAM superfamily AURMO_01409 PF01545 Cation efflux family AURMO_01411 PF01022 Bacterial regulatory protein, arsR family AURMO_01418 PF18357 Diphteria toxin repressor SH3 domain AURMO_01418 PF02742 Iron dependent repressor, metal binding and dimerisation domain AURMO_01418 PF01325 Iron dependent repressor, N-terminal DNA binding domain AURMO_01419 PF00266 Aminotransferase class-V AURMO_01421 PF00313 'Cold-shock' DNA-binding domain AURMO_01425 PF00486 Transcriptional regulatory protein, C terminal AURMO_01425 PF00072 Response regulator receiver domain AURMO_01426 PF00989 PAS fold AURMO_01426 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURMO_01426 PF16736 Single Cache-like AURMO_01426 PF00512 His Kinase A (phospho-acceptor) domain AURMO_01428 PF00118 TCP-1/cpn60 chaperonin family AURMO_01429 PF17479 Protein of unknown function (DUF3048) C-terminal domain AURMO_01429 PF11258 Protein of unknown function (DUF3048) N-terminal domain AURMO_01430 PF00313 'Cold-shock' DNA-binding domain AURMO_01435 PF00588 SpoU rRNA Methylase family AURMO_01435 PF08032 RNA 2'-O ribose methyltransferase substrate binding AURMO_01436 PF01406 tRNA synthetases class I (C) catalytic domain AURMO_01436 PF09190 DALR domain AURMO_01437 PF02542 YgbB family AURMO_01437 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AURMO_01438 PF02559 CarD-like/TRCF domain AURMO_01440 PF00300 Histidine phosphatase superfamily (branch 1) AURMO_01442 PF01571 Aminomethyltransferase folate-binding domain AURMO_01444 PF00486 Transcriptional regulatory protein, C terminal AURMO_01445 PF13089 Polyphosphate kinase N-terminal domain AURMO_01445 PF02503 Polyphosphate kinase middle domain AURMO_01445 PF13090 Polyphosphate kinase C-terminal domain 2 AURMO_01445 PF17941 Polyphosphate kinase C-terminal domain 1 AURMO_01446 PF00300 Histidine phosphatase superfamily (branch 1) AURMO_01446 PF00293 NUDIX domain AURMO_01449 PF02600 Disulfide bond formation protein DsbB AURMO_01452 PF00196 Bacterial regulatory proteins, luxR family AURMO_01452 PF00072 Response regulator receiver domain AURMO_01457 PF02678 Pirin AURMO_01457 PF05726 Pirin C-terminal cupin domain AURMO_01459 PF09587 Bacterial capsule synthesis protein PGA_cap AURMO_01461 PF00132 Bacterial transferase hexapeptide (six repeats) AURMO_01462 PF00665 Integrase core domain AURMO_01463 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AURMO_01463 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AURMO_01464 PF00464 Serine hydroxymethyltransferase AURMO_01465 PF00551 Formyl transferase AURMO_01466 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AURMO_01469 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AURMO_01469 PF00175 Oxidoreductase NAD-binding domain AURMO_01473 PF00687 Ribosomal protein L1p/L10e family AURMO_01474 PF03946 Ribosomal protein L11, N-terminal domain AURMO_01474 PF00298 Ribosomal protein L11, RNA binding domain AURMO_01475 PF02357 Transcription termination factor nusG AURMO_01476 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AURMO_01478 PF00155 Aminotransferase class I and II AURMO_01480 PF01565 FAD binding domain AURMO_01480 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AURMO_01482 PF13452 N-terminal half of MaoC dehydratase AURMO_01483 PF00282 Pyridoxal-dependent decarboxylase conserved domain AURMO_01484 PF04371 Porphyromonas-type peptidyl-arginine deiminase AURMO_01490 PF00005 ABC transporter AURMO_01493 PF00111 2Fe-2S iron-sulfur cluster binding domain AURMO_01494 PF08240 Alcohol dehydrogenase GroES-like domain AURMO_01494 PF00107 Zinc-binding dehydrogenase AURMO_01495 PF14759 Reductase C-terminal AURMO_01495 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURMO_01497 PF01557 Fumarylacetoacetate (FAA) hydrolase family AURMO_01498 PF01871 AMMECR1 AURMO_01498 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AURMO_01499 PF00171 Aldehyde dehydrogenase family AURMO_01500 PF07722 Peptidase C26 AURMO_01501 PF01047 MarR family AURMO_01502 PF00067 Cytochrome P450 AURMO_01505 PF00120 Glutamine synthetase, catalytic domain AURMO_01505 PF03951 Glutamine synthetase, beta-Grasp domain AURMO_01508 PF02142 MGS-like domain AURMO_01508 PF01808 AICARFT/IMPCHase bienzyme AURMO_01510 PF00551 Formyl transferase AURMO_01515 PF00549 CoA-ligase AURMO_01515 PF02629 CoA binding domain AURMO_01516 PF00549 CoA-ligase AURMO_01516 PF08442 ATP-grasp domain AURMO_01518 PF13361 UvrD-like helicase C-terminal domain AURMO_01518 PF00580 UvrD/REP helicase N-terminal domain AURMO_01519 PF03009 Glycerophosphoryl diester phosphodiesterase family AURMO_01524 PF00171 Aldehyde dehydrogenase family AURMO_01525 PF00171 Aldehyde dehydrogenase family AURMO_01526 PF01791 DeoC/LacD family aldolase AURMO_01527 PF01048 Phosphorylase superfamily AURMO_01528 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AURMO_01528 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AURMO_01528 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AURMO_01528 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AURMO_01529 PF02885 Glycosyl transferase family, helical bundle domain AURMO_01529 PF00591 Glycosyl transferase family, a/b domain AURMO_01529 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AURMO_01530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AURMO_01534 PF13276 HTH-like domain AURMO_01534 PF13333 Integrase core domain AURMO_01534 PF00665 Integrase core domain AURMO_01537 PF00764 Arginosuccinate synthase AURMO_01538 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AURMO_01538 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AURMO_01539 PF01325 Iron dependent repressor, N-terminal DNA binding domain AURMO_01539 PF00480 ROK family AURMO_01540 PF01261 Xylose isomerase-like TIM barrel AURMO_01541 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AURMO_01541 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AURMO_01542 PF13407 Periplasmic binding protein domain AURMO_01543 PF00005 ABC transporter AURMO_01544 PF02653 Branched-chain amino acid transport system / permease component AURMO_01545 PF01263 Aldose 1-epimerase AURMO_01547 PF03358 NADPH-dependent FMN reductase AURMO_01547 PF01566 Natural resistance-associated macrophage protein AURMO_01548 PF16320 Ribosomal protein L7/L12 dimerisation domain AURMO_01548 PF00542 Ribosomal protein L7/L12 C-terminal domain AURMO_01549 PF00466 Ribosomal protein L10 AURMO_01550 PF00294 pfkB family carbohydrate kinase AURMO_01551 PF00512 His Kinase A (phospho-acceptor) domain AURMO_01551 PF00672 HAMP domain AURMO_01551 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURMO_01552 PF00486 Transcriptional regulatory protein, C terminal AURMO_01552 PF00072 Response regulator receiver domain AURMO_01555 PF00155 Aminotransferase class I and II AURMO_01558 PF05683 Fumarase C-terminus AURMO_01558 PF05681 Fumarate hydratase (Fumerase) AURMO_01559 PF00107 Zinc-binding dehydrogenase AURMO_01559 PF08240 Alcohol dehydrogenase GroES-like domain AURMO_01560 PF00282 Pyridoxal-dependent decarboxylase conserved domain AURMO_01561 PF00664 ABC transporter transmembrane region AURMO_01561 PF00005 ABC transporter AURMO_01562 PF00005 ABC transporter AURMO_01562 PF00664 ABC transporter transmembrane region AURMO_01563 PF01425 Amidase AURMO_01566 PF03741 Integral membrane protein TerC family AURMO_01570 PF00128 Alpha amylase, catalytic domain AURMO_01571 PF04225 Opacity-associated protein A LysM-like domain AURMO_01571 PF01551 Peptidase family M23 AURMO_01572 PF00459 Inositol monophosphatase family AURMO_01575 PF01979 Amidohydrolase family AURMO_01577 PF03971 Monomeric isocitrate dehydrogenase AURMO_01582 PF04461 Protein of unknown function (DUF520) AURMO_01584 PF01037 Lrp/AsnC ligand binding domain AURMO_01585 PF00135 Carboxylesterase family AURMO_01589 PF00202 Aminotransferase class-III AURMO_01591 PF13936 Helix-turn-helix domain AURMO_01591 PF00665 Integrase core domain AURMO_01592 PF00005 ABC transporter AURMO_01593 PF00528 Binding-protein-dependent transport system inner membrane component AURMO_01594 PF00528 Binding-protein-dependent transport system inner membrane component AURMO_01595 PF12849 PBP superfamily domain AURMO_01596 PF01895 PhoU domain AURMO_01597 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURMO_01597 PF00512 His Kinase A (phospho-acceptor) domain AURMO_01598 PF00072 Response regulator receiver domain AURMO_01598 PF00486 Transcriptional regulatory protein, C terminal AURMO_01599 PF01022 Bacterial regulatory protein, arsR family AURMO_01600 PF00230 Major intrinsic protein AURMO_01601 PF01451 Low molecular weight phosphotyrosine protein phosphatase AURMO_01602 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURMO_01603 PF02844 Phosphoribosylglycinamide synthetase, N domain AURMO_01603 PF02843 Phosphoribosylglycinamide synthetase, C domain AURMO_01603 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AURMO_01604 PF01259 SAICAR synthetase AURMO_01609 PF07731 Multicopper oxidase AURMO_01609 PF07732 Multicopper oxidase AURMO_01609 PF00394 Multicopper oxidase AURMO_01612 PF13439 Glycosyltransferase Family 4 AURMO_01612 PF00534 Glycosyl transferases group 1 AURMO_01613 PF09335 SNARE associated Golgi protein AURMO_01614 PF00483 Nucleotidyl transferase AURMO_01616 PF00501 AMP-binding enzyme AURMO_01616 PF13193 AMP-binding enzyme C-terminal domain AURMO_01616 PF00668 Condensation domain AURMO_01616 PF07993 Male sterility protein AURMO_01616 PF00550 Phosphopantetheine attachment site AURMO_01617 PF11838 ERAP1-like C-terminal domain AURMO_01617 PF01433 Peptidase family M1 domain AURMO_01620 PF03301 Tryptophan 2,3-dioxygenase AURMO_01622 PF00266 Aminotransferase class-V AURMO_01623 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AURMO_01626 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AURMO_01626 PF00586 AIR synthase related protein, N-terminal domain AURMO_01626 PF02769 AIR synthase related protein, C-terminal domain AURMO_01629 PF02153 Prephenate dehydrogenase AURMO_01629 PF01817 Chorismate mutase type II AURMO_01630 PF00892 EamA-like transporter family AURMO_01631 PF00709 Adenylosuccinate synthetase AURMO_01632 PF03848 Tellurite resistance protein TehB AURMO_01633 PF00588 SpoU rRNA Methylase family AURMO_01633 PF08032 RNA 2'-O ribose methyltransferase substrate binding AURMO_01634 PF00156 Phosphoribosyl transferase domain AURMO_01636 PF00873 AcrB/AcrD/AcrF family AURMO_01637 PF13520 Amino acid permease AURMO_01638 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AURMO_01639 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AURMO_01641 PF01925 Sulfite exporter TauE/SafE AURMO_01642 PF02769 AIR synthase related protein, C-terminal domain AURMO_01642 PF00586 AIR synthase related protein, N-terminal domain AURMO_01643 PF00156 Phosphoribosyl transferase domain AURMO_01646 PF00348 Polyprenyl synthetase AURMO_01647 PF01209 ubiE/COQ5 methyltransferase family AURMO_01648 PF00425 chorismate binding enzyme AURMO_01649 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AURMO_01652 PF01040 UbiA prenyltransferase family AURMO_01653 PF13193 AMP-binding enzyme C-terminal domain AURMO_01653 PF00501 AMP-binding enzyme AURMO_01654 PF00378 Enoyl-CoA hydratase/isomerase AURMO_01655 PF18374 Enolase N-terminal domain-like AURMO_01655 PF13378 Enolase C-terminal domain-like AURMO_01656 PF01578 Cytochrome C assembly protein AURMO_01657 PF05140 ResB-like family AURMO_01658 PF02683 Cytochrome C biogenesis protein transmembrane region AURMO_01659 PF00578 AhpC/TSA family AURMO_01660 PF00300 Histidine phosphatase superfamily (branch 1) AURMO_01661 PF00152 tRNA synthetases class II (D, K and N) AURMO_01661 PF01336 OB-fold nucleic acid binding domain AURMO_01667 PF02386 Cation transport protein AURMO_01668 PF02080 TrkA-C domain AURMO_01668 PF02254 TrkA-N domain AURMO_01669 PF03807 NADP oxidoreductase coenzyme F420-dependent AURMO_01669 PF14748 Pyrroline-5-carboxylate reductase dimerisation AURMO_01671 PF14437 MafB19-like deaminase AURMO_01672 PF00486 Transcriptional regulatory protein, C terminal AURMO_01672 PF00072 Response regulator receiver domain AURMO_01673 PF00875 DNA photolyase AURMO_01673 PF03441 FAD binding domain of DNA photolyase AURMO_01675 PF08379 Bacterial transglutaminase-like N-terminal region AURMO_01675 PF01841 Transglutaminase-like superfamily AURMO_01677 PF04174 A circularly permuted ATPgrasp AURMO_01680 PF03109 ABC1 family AURMO_01683 PF00106 short chain dehydrogenase AURMO_01685 PF08379 Bacterial transglutaminase-like N-terminal region AURMO_01685 PF01841 Transglutaminase-like superfamily AURMO_01689 PF00106 short chain dehydrogenase AURMO_01691 PF01212 Beta-eliminating lyase AURMO_01695 PF13651 Adenine-specific methyltransferase EcoRI AURMO_01698 PF10431 C-terminal, D2-small domain, of ClpB protein AURMO_01698 PF02861 Clp amino terminal domain, pathogenicity island component AURMO_01698 PF07724 AAA domain (Cdc48 subfamily) AURMO_01698 PF17871 AAA lid domain AURMO_01698 PF00004 ATPase family associated with various cellular activities (AAA) AURMO_01699 PF05175 Methyltransferase small domain AURMO_01702 PF13411 MerR HTH family regulatory protein AURMO_01703 PF00226 DnaJ domain AURMO_01703 PF01556 DnaJ C terminal domain AURMO_01703 PF00684 DnaJ central domain AURMO_01704 PF01025 GrpE AURMO_01705 PF00012 Hsp70 protein AURMO_01707 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AURMO_01708 PF13744 Helix-turn-helix domain AURMO_01709 PF05973 Phage derived protein Gp49-like (DUF891) AURMO_01713 PF01593 Flavin containing amine oxidoreductase AURMO_01716 PF00293 NUDIX domain AURMO_01719 PF00692 dUTPase AURMO_01721 PF05970 PIF1-like helicase AURMO_01723 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AURMO_01723 PF05425 Copper resistance protein D AURMO_01724 PF00216 Bacterial DNA-binding protein AURMO_01725 PF00253 Ribosomal protein S14p/S29e AURMO_01726 PF00471 Ribosomal protein L33 AURMO_01727 PF00830 Ribosomal L28 family AURMO_01729 PF01475 Ferric uptake regulator family AURMO_01730 PF00950 ABC 3 transport family AURMO_01731 PF00950 ABC 3 transport family AURMO_01732 PF00005 ABC transporter AURMO_01733 PF01297 Zinc-uptake complex component A periplasmic AURMO_01733 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AURMO_01740 PF03129 Anticodon binding domain AURMO_01740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AURMO_01741 PF01431 Peptidase family M13 AURMO_01741 PF05649 Peptidase family M13 AURMO_01744 PF01939 Endonuclease NucS AURMO_01751 PF13651 Adenine-specific methyltransferase EcoRI AURMO_01756 PF00175 Oxidoreductase NAD-binding domain AURMO_01756 PF00111 2Fe-2S iron-sulfur cluster binding domain AURMO_01756 PF00970 Oxidoreductase FAD-binding domain AURMO_01760 PF00072 Response regulator receiver domain AURMO_01760 PF00486 Transcriptional regulatory protein, C terminal AURMO_01761 PF00672 HAMP domain AURMO_01761 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURMO_01761 PF00512 His Kinase A (phospho-acceptor) domain AURMO_01762 PF00498 FHA domain AURMO_01762 PF12401 Protein of unknown function (DUF2662) AURMO_01763 PF16697 Inner membrane component of T3SS, cytoplasmic domain AURMO_01765 PF01098 Cell cycle protein AURMO_01766 PF00905 Penicillin binding protein transpeptidase domain AURMO_01767 PF00069 Protein kinase domain AURMO_01768 PF00069 Protein kinase domain AURMO_01768 PF03793 PASTA domain AURMO_01769 PF00117 Glutamine amidotransferase class-I AURMO_01771 PF04203 Sortase domain AURMO_01772 PF06781 Cell division protein CrgA AURMO_01773 PF01694 Rhomboid family AURMO_01774 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AURMO_01788 PF00521 DNA gyrase/topoisomerase IV, subunit A AURMO_01788 PF03989 DNA gyrase C-terminal domain, beta-propeller AURMO_01789 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURMO_01789 PF00204 DNA gyrase B AURMO_01789 PF00986 DNA gyrase B subunit, carboxyl terminus AURMO_01789 PF01751 Toprim domain AURMO_01790 PF05258 Dna[CI] antecedent, DciA AURMO_01791 PF02463 RecF/RecN/SMC N terminal domain AURMO_01792 PF02767 DNA polymerase III beta subunit, central domain AURMO_01792 PF02768 DNA polymerase III beta subunit, C-terminal domain AURMO_01792 PF00712 DNA polymerase III beta subunit, N-terminal domain