AURUGA1_00001 PF00308 Bacterial dnaA protein AURUGA1_00001 PF08299 Bacterial dnaA protein helix-turn-helix AURUGA1_00002 PF00712 DNA polymerase III beta subunit, N-terminal domain AURUGA1_00002 PF02767 DNA polymerase III beta subunit, central domain AURUGA1_00002 PF02768 DNA polymerase III beta subunit, C-terminal domain AURUGA1_00003 PF02463 RecF/RecN/SMC N terminal domain AURUGA1_00004 PF05258 AURUGA1_00004 AURUGA1_00005 PF00204 DNA gyrase B AURUGA1_00005 PF00986 DNA gyrase B subunit, carboxyl terminus AURUGA1_00005 PF01751 Toprim domain AURUGA1_00005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURUGA1_00006 PF00521 DNA gyrase/topoisomerase IV, subunit A AURUGA1_00006 PF03989 DNA gyrase C-terminal domain, beta-propeller AURUGA1_00007 PF12089 AURUGA1_00007 AURUGA1_00011 PF02190 ATP-dependent protease La (LON) domain AURUGA1_00013 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AURUGA1_00014 PF01694 Rhomboid family AURUGA1_00015 PF06781 AURUGA1_00015 AURUGA1_00016 PF04203 Sortase family AURUGA1_00018 PF00117 Glutamine amidotransferase class-I AURUGA1_00019 PF00069 Protein kinase domain AURUGA1_00019 PF03793 PASTA domain AURUGA1_00020 PF00069 Protein kinase domain AURUGA1_00020 PF03793 PASTA domain AURUGA1_00021 PF00905 Penicillin binding protein transpeptidase domain AURUGA1_00022 PF01098 AURUGA1_00022 AURUGA1_00023 PF13672 Protein phosphatase 2C AURUGA1_00024 PF16697 AURUGA1_00024 AURUGA1_00025 PF12401 Protein of unknown function (DUF2662) AURUGA1_00025 PF16697 AURUGA1_00025 AURUGA1_00029 PF04657 AURUGA1_00029 AURUGA1_00030 PF13419 Haloacid dehalogenase-like hydrolase AURUGA1_00031 PF01939 Protein of unknown function DUF91 AURUGA1_00032 PF13419 Haloacid dehalogenase-like hydrolase AURUGA1_00033 PF13561 Enoyl-(Acyl carrier protein) reductase AURUGA1_00034 PF01431 Peptidase family M13 AURUGA1_00034 PF05649 Peptidase family M13 AURUGA1_00035 PF03129 Anticodon binding domain AURUGA1_00038 PF07332 AURUGA1_00038 AURUGA1_00039 PF12277 AURUGA1_00039 AURUGA1_00040 PF02602 Uroporphyrinogen-III synthase HemD AURUGA1_00041 PF00581 Rhodanese-like domain AURUGA1_00041 PF12368 AURUGA1_00041 AURUGA1_00042 PF01297 Periplasmic solute binding protein family AURUGA1_00043 PF00005 ABC transporter AURUGA1_00044 PF00950 AURUGA1_00044 AURUGA1_00045 PF00950 AURUGA1_00045 AURUGA1_00046 PF01475 Ferric uptake regulator family AURUGA1_00047 PF00830 Ribosomal L28 family AURUGA1_00048 PF00471 Ribosomal protein L33 AURUGA1_00049 PF00253 Ribosomal protein S14p/S29e AURUGA1_00050 PF00216 Bacterial DNA-binding protein AURUGA1_00051 PF05425 AURUGA1_00051 AURUGA1_00051 PF09678 AURUGA1_00051 AURUGA1_00053 PF05970 AURUGA1_00053 AURUGA1_00054 PF04134 AURUGA1_00054 AURUGA1_00055 PF00206 Lyase AURUGA1_00055 PF08328 Adenylosuccinate lyase C-terminal AURUGA1_00057 PF07819 PGAP1-like protein AURUGA1_00058 PF04020 AURUGA1_00058 AURUGA1_00059 PF00676 Dehydrogenase E1 component AURUGA1_00060 PF02779 Transketolase, pyrimidine binding domain AURUGA1_00060 PF02780 Transketolase, C-terminal domain AURUGA1_00061 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AURUGA1_00061 PF00364 Biotin-requiring enzyme AURUGA1_00061 PF02817 e3 binding domain AURUGA1_00062 PF01810 AURUGA1_00062 AURUGA1_00063 PF13450 NAD(P)-binding Rossmann-like domain AURUGA1_00064 PF01037 AsnC family AURUGA1_00064 PF13404 AsnC-type helix-turn-helix domain AURUGA1_00065 PF08245 Mur ligase middle domain AURUGA1_00065 PF08353 AURUGA1_00065 AURUGA1_00066 PF07685 CobB/CobQ-like glutamine amidotransferase domain AURUGA1_00067 PF00854 POT family AURUGA1_00068 PF12146 Putative lysophospholipase AURUGA1_00069 PF14542 GCN5-related N-acetyl-transferase AURUGA1_00070 PF01555 DNA methylase AURUGA1_00071 PF12900 Pyridoxamine 5'-phosphate oxidase AURUGA1_00072 PF07690 Major Facilitator Superfamily AURUGA1_00073 PF01638 HxlR-like helix-turn-helix AURUGA1_00074 PF02557 D-alanyl-D-alanine carboxypeptidase AURUGA1_00075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AURUGA1_00075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AURUGA1_00075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AURUGA1_00075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AURUGA1_00076 PF00800 Prephenate dehydratase AURUGA1_00076 PF01842 ACT domain AURUGA1_00077 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AURUGA1_00077 PF02403 Seryl-tRNA synthetase N-terminal domain AURUGA1_00078 PF08282 haloacid dehalogenase-like hydrolase AURUGA1_00080 PF03816 Cell envelope-related transcriptional attenuator domain AURUGA1_00083 PF00270 DEAD/DEAH box helicase AURUGA1_00083 PF00271 Helicase conserved C-terminal domain AURUGA1_00084 PF00892 EamA-like transporter family AURUGA1_00085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AURUGA1_00085 PF01756 Acyl-CoA oxidase AURUGA1_00085 PF02770 Acyl-CoA dehydrogenase, middle domain AURUGA1_00085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AURUGA1_00086 PF07690 Major Facilitator Superfamily AURUGA1_00087 PF01566 AURUGA1_00087 AURUGA1_00090 PF03976 Polyphosphate kinase 2 (PPK2) AURUGA1_00091 PF10009 AURUGA1_00091 AURUGA1_00092 PF01738 Dienelactone hydrolase family AURUGA1_00093 PF00809 Pterin binding enzyme AURUGA1_00093 PF02310 B12 binding domain AURUGA1_00093 PF02574 Homocysteine S-methyltransferase AURUGA1_00093 PF02607 B12 binding domain AURUGA1_00093 PF02965 Vitamin B12 dependent methionine synthase, activation domain AURUGA1_00095 PF12822 Protein of unknown function (DUF3816) AURUGA1_00096 PF00005 ABC transporter AURUGA1_00100 PF00654 Voltage gated chloride channel AURUGA1_00101 PF00440 Bacterial regulatory proteins, tetR family AURUGA1_00102 PF00202 Aminotransferase class-III AURUGA1_00103 PF00490 Delta-aminolevulinic acid dehydratase AURUGA1_00104 PF02602 Uroporphyrinogen-III synthase HemD AURUGA1_00105 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AURUGA1_00105 PF03900 Porphobilinogen deaminase, C-terminal domain AURUGA1_00106 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AURUGA1_00106 PF01488 Shikimate / quinate 5-dehydrogenase AURUGA1_00106 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AURUGA1_00107 PF01208 Uroporphyrinogen decarboxylase (URO-D) AURUGA1_00108 PF01593 Flavin containing amine oxidoreductase AURUGA1_00109 PF06778 Chlorite dismutase AURUGA1_00110 PF00762 Ferrochelatase AURUGA1_00114 PF01551 Peptidase family M23 AURUGA1_00115 PF00719 Inorganic pyrophosphatase AURUGA1_00116 PF01171 PP-loop family AURUGA1_00116 PF09179 TilS substrate binding domain AURUGA1_00117 PF00156 Phosphoribosyl transferase domain AURUGA1_00118 PF00004 ATPase family associated with various cellular activities (AAA) AURUGA1_00118 PF01434 Peptidase family M41 AURUGA1_00119 PF01227 GTP cyclohydrolase I AURUGA1_00120 PF00809 Pterin binding enzyme AURUGA1_00121 PF02152 Dihydroneopterin aldolase AURUGA1_00122 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AURUGA1_00123 PF11377 AURUGA1_00123 AURUGA1_00124 PF10727 Rossmann-like domain AURUGA1_00124 PF10728 Domain of unknown function (DUF2520) AURUGA1_00125 PF02569 Pantoate-beta-alanine ligase AURUGA1_00126 PF00152 tRNA synthetases class II (D, K and N) AURUGA1_00126 PF01336 OB-fold nucleic acid binding domain AURUGA1_00128 PF13091 PLD-like domain AURUGA1_00128 PF13396 AURUGA1_00128 AURUGA1_00129 PF00248 Aldo/keto reductase family AURUGA1_00130 PF04073 Aminoacyl-tRNA editing domain AURUGA1_00131 PF02627 Carboxymuconolactone decarboxylase family AURUGA1_00132 PF02678 Pirin AURUGA1_00132 PF05726 Pirin C-terminal cupin domain AURUGA1_00133 PF00004 ATPase family associated with various cellular activities (AAA) AURUGA1_00133 PF02151 UvrB/uvrC motif AURUGA1_00133 PF02861 Clp amino terminal domain AURUGA1_00133 PF07724 AAA domain (Cdc48 subfamily) AURUGA1_00133 PF10431 C-terminal, D2-small domain, of ClpB protein AURUGA1_00134 PF00583 Acetyltransferase (GNAT) family AURUGA1_00136 PF01590 GAF domain AURUGA1_00137 PF00171 Aldehyde dehydrogenase family AURUGA1_00138 PF05610 AURUGA1_00138 AURUGA1_00139 PF05362 Lon protease (S16) C-terminal proteolytic domain AURUGA1_00139 PF13481 AAA domain AURUGA1_00142 PF00072 Response regulator receiver domain AURUGA1_00142 PF00196 Bacterial regulatory proteins, luxR family AURUGA1_00145 PF05345 Putative Ig domain AURUGA1_00146 PF02517 CAAX protease self-immunity AURUGA1_00147 PF11196 AURUGA1_00147 AURUGA1_00148 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) AURUGA1_00148 PF13385 Concanavalin A-like lectin/glucanases superfamily AURUGA1_00150 PF16262 AURUGA1_00150 AURUGA1_00152 PF05103 DivIVA protein AURUGA1_00154 PF10263 AURUGA1_00154 AURUGA1_00155 PF01564 Spermine/spermidine synthase AURUGA1_00156 PF00562 RNA polymerase Rpb2, domain 6 AURUGA1_00156 PF04560 RNA polymerase Rpb2, domain 7 AURUGA1_00156 PF04561 RNA polymerase Rpb2, domain 2 AURUGA1_00156 PF04563 RNA polymerase beta subunit AURUGA1_00156 PF04565 RNA polymerase Rpb2, domain 3 AURUGA1_00156 PF10385 RNA polymerase beta subunit external 1 domain AURUGA1_00157 PF00623 RNA polymerase Rpb1, domain 2 AURUGA1_00157 PF04983 RNA polymerase Rpb1, domain 3 AURUGA1_00157 PF04997 RNA polymerase Rpb1, domain 1 AURUGA1_00157 PF04998 RNA polymerase Rpb1, domain 5 AURUGA1_00157 PF05000 RNA polymerase Rpb1, domain 4 AURUGA1_00159 PF00164 Ribosomal protein S12/S23 AURUGA1_00160 PF00177 Ribosomal protein S7p/S5e AURUGA1_00161 PF00009 Elongation factor Tu GTP binding domain AURUGA1_00161 PF00679 Elongation factor G C-terminus AURUGA1_00161 PF03144 Elongation factor Tu domain 2 AURUGA1_00161 PF03764 Elongation factor G, domain IV AURUGA1_00161 PF14492 Elongation Factor G, domain II AURUGA1_00162 PF00009 Elongation factor Tu GTP binding domain AURUGA1_00162 PF03143 Elongation factor Tu C-terminal domain AURUGA1_00162 PF03144 Elongation factor Tu domain 2 AURUGA1_00163 PF01292 Prokaryotic cytochrome b561 AURUGA1_00164 PF00916 AURUGA1_00164 AURUGA1_00164 PF01740 STAS domain AURUGA1_00165 PF00338 Ribosomal protein S10p/S20e AURUGA1_00166 PF00297 Ribosomal protein L3 AURUGA1_00167 PF00573 Ribosomal protein L4/L1 family AURUGA1_00168 PF00276 Ribosomal protein L23 AURUGA1_00169 PF00181 Ribosomal Proteins L2, RNA binding domain AURUGA1_00169 PF03947 Ribosomal Proteins L2, C-terminal domain AURUGA1_00170 PF00203 Ribosomal protein S19 AURUGA1_00171 PF00237 Ribosomal protein L22p/L17e AURUGA1_00172 PF00189 Ribosomal protein S3, C-terminal domain AURUGA1_00172 PF07650 KH domain AURUGA1_00173 PF00252 Ribosomal protein L16p/L10e AURUGA1_00174 PF00831 Ribosomal L29 protein AURUGA1_00175 PF00366 Ribosomal protein S17 AURUGA1_00176 PF00238 Ribosomal protein L14p/L23e AURUGA1_00177 PF17136 AURUGA1_00177 AURUGA1_00178 PF00281 Ribosomal protein L5 AURUGA1_00178 PF00673 ribosomal L5P family C-terminus AURUGA1_00179 PF00410 Ribosomal protein S8 AURUGA1_00180 PF00347 Ribosomal protein L6 AURUGA1_00181 PF00861 Ribosomal L18p/L5e family AURUGA1_00182 PF00333 Ribosomal protein S5, N-terminal domain AURUGA1_00182 PF03719 Ribosomal protein S5, C-terminal domain AURUGA1_00183 PF00327 Ribosomal protein L30p/L7e AURUGA1_00184 PF00828 Ribosomal protein L18e/L15 AURUGA1_00185 PF00344 SecY translocase AURUGA1_00186 PF00406 Adenylate kinase AURUGA1_00187 PF00557 Metallopeptidase family M24 AURUGA1_00188 PF00415 Regulator of chromosome condensation (RCC1) repeat AURUGA1_00189 PF01176 Translation initiation factor 1A / IF-1 AURUGA1_00190 PF00416 Ribosomal protein S13/S18 AURUGA1_00191 PF00411 Ribosomal protein S11 AURUGA1_00192 PF01000 RNA polymerase Rpb3/RpoA insert domain AURUGA1_00192 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AURUGA1_00192 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AURUGA1_00193 PF01196 Ribosomal protein L17 AURUGA1_00194 PF01416 tRNA pseudouridine synthase AURUGA1_00195 PF00572 Ribosomal protein L13 AURUGA1_00196 PF00380 Ribosomal protein S9/S16 AURUGA1_00197 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AURUGA1_00197 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AURUGA1_00197 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AURUGA1_00197 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AURUGA1_00198 PF00485 Phosphoribulokinase / Uridine kinase family AURUGA1_00199 PF01380 SIS domain AURUGA1_00199 PF13522 Glutamine amidotransferase domain AURUGA1_00200 PF01648 4'-phosphopantetheinyl transferase superfamily AURUGA1_00201 PF00842 Alanine racemase, C-terminal domain AURUGA1_00201 PF01168 Alanine racemase, N-terminal domain AURUGA1_00202 PF02367 Uncharacterised P-loop hydrolase UPF0079 AURUGA1_00203 PF00814 Glycoprotease family AURUGA1_00204 PF00583 Acetyltransferase (GNAT) family AURUGA1_00205 PF00814 Glycoprotease family AURUGA1_00206 PF13828 AURUGA1_00206 AURUGA1_00209 PF00166 Chaperonin 10 Kd subunit AURUGA1_00210 PF00892 EamA-like transporter family AURUGA1_00211 PF13458 Periplasmic binding protein AURUGA1_00212 PF13458 Periplasmic binding protein AURUGA1_00213 PF13458 Periplasmic binding protein AURUGA1_00214 PF01381 Helix-turn-helix AURUGA1_00216 PF02661 Fic/DOC family AURUGA1_00217 PF00117 Glutamine amidotransferase class-I AURUGA1_00217 PF00958 GMP synthase C terminal domain AURUGA1_00217 PF02540 NAD synthase AURUGA1_00218 PF12823 AURUGA1_00218 AURUGA1_00219 PF02104 AURUGA1_00219 AURUGA1_00220 PF01266 FAD dependent oxidoreductase AURUGA1_00220 PF16901 AURUGA1_00220 AURUGA1_00221 PF00478 IMP dehydrogenase / GMP reductase domain AURUGA1_00222 PF00478 IMP dehydrogenase / GMP reductase domain AURUGA1_00222 PF00571 CBS domain AURUGA1_00223 PF02653 AURUGA1_00223 AURUGA1_00224 PF02653 AURUGA1_00224 AURUGA1_00225 PF00005 ABC transporter AURUGA1_00225 PF12399 Branched-chain amino acid ATP-binding cassette transporter AURUGA1_00226 PF00005 ABC transporter AURUGA1_00227 PF12643 AURUGA1_00227 AURUGA1_00228 PF09848 Uncharacterized conserved protein (DUF2075) AURUGA1_00229 PF00145 C-5 cytosine-specific DNA methylase AURUGA1_00230 PF10593 AURUGA1_00230 AURUGA1_00231 PF14390 AURUGA1_00231 AURUGA1_00235 PF01936 NYN domain AURUGA1_00239 PF03382 AURUGA1_00239 AURUGA1_00248 PF14436 AURUGA1_00248 AURUGA1_00251 PF14436 AURUGA1_00251 AURUGA1_00253 PF01425 Amidase AURUGA1_00254 PF00005 ABC transporter AURUGA1_00254 PF00664 ABC transporter transmembrane region AURUGA1_00255 PF00005 ABC transporter AURUGA1_00255 PF00664 ABC transporter transmembrane region AURUGA1_00256 PF01276 Orn/Lys/Arg decarboxylase, major domain AURUGA1_00256 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AURUGA1_00257 PF00282 Pyridoxal-dependent decarboxylase conserved domain AURUGA1_00258 PF00107 Zinc-binding dehydrogenase AURUGA1_00258 PF08240 Alcohol dehydrogenase GroES-like domain AURUGA1_00259 PF05681 AURUGA1_00259 AURUGA1_00259 PF05683 Fumarase C-terminus AURUGA1_00260 PF00122 E1-E2 ATPase AURUGA1_00260 PF00702 haloacid dehalogenase-like hydrolase AURUGA1_00261 PF02424 ApbE family AURUGA1_00263 PF01794 AURUGA1_00263 AURUGA1_00264 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AURUGA1_00265 PF04264 YceI-like domain AURUGA1_00266 PF00551 Formyl transferase AURUGA1_00266 PF01842 ACT domain AURUGA1_00267 PF00464 Serine hydroxymethyltransferase AURUGA1_00268 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AURUGA1_00268 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AURUGA1_00269 PF00132 Bacterial transferase hexapeptide (six repeats) AURUGA1_00270 PF00534 Glycosyl transferases group 1 AURUGA1_00272 PF02678 Pirin AURUGA1_00272 PF05726 Pirin C-terminal cupin domain AURUGA1_00275 PF02600 Disulfide bond formation protein DsbB AURUGA1_00278 PF00293 NUDIX domain AURUGA1_00278 PF00300 Histidine phosphatase superfamily (branch 1) AURUGA1_00279 PF02503 Polyphosphate kinase middle domain AURUGA1_00279 PF13089 Polyphosphate kinase N-terminal domain AURUGA1_00279 PF13090 Polyphosphate kinase C-terminal domain AURUGA1_00280 PF00486 Transcriptional regulatory protein, C terminal AURUGA1_00282 PF01571 Aminomethyltransferase folate-binding domain AURUGA1_00282 PF08669 Glycine cleavage T-protein C-terminal barrel domain AURUGA1_00284 PF00300 Histidine phosphatase superfamily (branch 1) AURUGA1_00287 PF02559 CarD-like/TRCF domain AURUGA1_00288 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AURUGA1_00288 PF02542 YgbB family AURUGA1_00289 PF01406 tRNA synthetases class I (C) catalytic domain AURUGA1_00289 PF09190 DALR domain AURUGA1_00290 PF00588 SpoU rRNA Methylase family AURUGA1_00290 PF08032 RNA 2'-O ribose methyltransferase substrate binding AURUGA1_00291 PF13462 Thioredoxin AURUGA1_00293 PF11662 AURUGA1_00293 AURUGA1_00294 PF13399 LytR cell envelope-related transcriptional attenuator AURUGA1_00295 PF00313 'Cold-shock' DNA-binding domain AURUGA1_00296 PF11258 Protein of unknown function (DUF3048) AURUGA1_00296 PF17479 AURUGA1_00296 AURUGA1_00297 PF00118 TCP-1/cpn60 chaperonin family AURUGA1_00298 PF06013 Proteins of 100 residues with WXG AURUGA1_00299 PF00512 His Kinase A (phospho-acceptor) domain AURUGA1_00299 PF00672 HAMP domain AURUGA1_00299 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURUGA1_00300 PF00072 Response regulator receiver domain AURUGA1_00300 PF00486 Transcriptional regulatory protein, C terminal AURUGA1_00301 PF04851 Type III restriction enzyme, res subunit AURUGA1_00301 PF13625 AURUGA1_00301 AURUGA1_00301 PF16203 AURUGA1_00301 AURUGA1_00302 PF13625 AURUGA1_00302 AURUGA1_00304 PF00313 'Cold-shock' DNA-binding domain AURUGA1_00305 PF11228 AURUGA1_00305 AURUGA1_00306 PF00266 Aminotransferase class-V AURUGA1_00307 PF01325 Iron dependent repressor, N-terminal DNA binding domain AURUGA1_00307 PF02742 Iron dependent repressor, metal binding and dimerisation domain AURUGA1_00308 PF00877 NlpC/P60 family AURUGA1_00309 PF14279 AURUGA1_00309 AURUGA1_00313 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AURUGA1_00313 PF03466 LysR substrate binding domain AURUGA1_00314 PF01276 Orn/Lys/Arg decarboxylase, major domain AURUGA1_00314 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AURUGA1_00316 PF04055 Radical SAM superfamily AURUGA1_00319 PF01812 5-formyltetrahydrofolate cyclo-ligase family AURUGA1_00320 PF13302 Acetyltransferase (GNAT) domain AURUGA1_00322 PF00106 short chain dehydrogenase AURUGA1_00323 PF01243 Pyridoxamine 5'-phosphate oxidase AURUGA1_00323 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AURUGA1_00324 PF00155 Aminotransferase class I and II AURUGA1_00325 PF07690 Major Facilitator Superfamily AURUGA1_00326 PF00317 Ribonucleotide reductase, all-alpha domain AURUGA1_00326 PF02867 Ribonucleotide reductase, barrel domain AURUGA1_00326 PF03477 ATP cone domain AURUGA1_00327 PF00268 Ribonucleotide reductase, small chain AURUGA1_00328 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) AURUGA1_00329 PF00270 DEAD/DEAH box helicase AURUGA1_00329 PF00271 Helicase conserved C-terminal domain AURUGA1_00329 PF04408 Helicase associated domain (HA2) AURUGA1_00329 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AURUGA1_00329 PF11898 AURUGA1_00329 AURUGA1_00330 PF07690 Major Facilitator Superfamily AURUGA1_00331 PF02574 Homocysteine S-methyltransferase AURUGA1_00332 PF03313 AURUGA1_00332 AURUGA1_00332 PF03315 Serine dehydratase beta chain AURUGA1_00333 PF02366 AURUGA1_00333 AURUGA1_00333 PF16192 AURUGA1_00333 AURUGA1_00334 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AURUGA1_00335 PF13343 Bacterial extracellular solute-binding protein AURUGA1_00336 PF00528 Binding-protein-dependent transport system inner membrane component AURUGA1_00337 PF00005 ABC transporter AURUGA1_00338 PF08264 Anticodon-binding domain of tRNA AURUGA1_00338 PF09334 tRNA synthetases class I (M) AURUGA1_00339 PF01026 TatD related DNase AURUGA1_00340 PF00398 Ribosomal RNA adenine dimethylase AURUGA1_00341 PF00288 GHMP kinases N terminal domain AURUGA1_00341 PF08544 GHMP kinases C terminal AURUGA1_00342 PF00005 ABC transporter AURUGA1_00342 PF16326 AURUGA1_00342 AURUGA1_00343 PF12802 MarR family AURUGA1_00345 PF00132 Bacterial transferase hexapeptide (six repeats) AURUGA1_00345 PF12804 MobA-like NTP transferase domain AURUGA1_00346 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AURUGA1_00346 PF14572 Phosphoribosyl synthetase-associated domain AURUGA1_00348 PF01850 PIN domain AURUGA1_00350 PF00294 pfkB family carbohydrate kinase AURUGA1_00351 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AURUGA1_00351 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AURUGA1_00352 PF01386 Ribosomal L25p family AURUGA1_00352 PF14693 Ribosomal protein TL5, C-terminal domain AURUGA1_00353 PF01195 Peptidyl-tRNA hydrolase AURUGA1_00355 PF00270 DEAD/DEAH box helicase AURUGA1_00355 PF00271 Helicase conserved C-terminal domain AURUGA1_00355 PF02559 CarD-like/TRCF domain AURUGA1_00355 PF03461 TRCF domain AURUGA1_00356 PF06965 Na+/H+ antiporter 1 AURUGA1_00357 PF12844 Helix-turn-helix domain AURUGA1_00358 PF00821 Phosphoenolpyruvate carboxykinase AURUGA1_00358 PF17297 AURUGA1_00358 AURUGA1_00360 PF03819 MazG nucleotide pyrophosphohydrolase domain AURUGA1_00361 PF13393 Histidyl-tRNA synthetase AURUGA1_00362 PF00113 Enolase, C-terminal TIM barrel domain AURUGA1_00362 PF03952 Enolase, N-terminal domain AURUGA1_00363 PF04977 Septum formation initiator AURUGA1_00364 PF04417 AURUGA1_00364 AURUGA1_00365 PF00082 Subtilase family AURUGA1_00366 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURUGA1_00368 PF00589 Phage integrase family AURUGA1_00369 PF01381 Helix-turn-helix AURUGA1_00373 PF13730 AURUGA1_00373 AURUGA1_00384 PF00128 Alpha amylase, catalytic domain AURUGA1_00385 PF07690 Major Facilitator Superfamily AURUGA1_00386 PF04011 LemA family AURUGA1_00387 PF01435 Peptidase family M48 AURUGA1_00388 PF00291 Pyridoxal-phosphate dependent enzyme AURUGA1_00388 PF01842 ACT domain AURUGA1_00389 PF01272 Transcription elongation factor, GreA/GreB, C-term AURUGA1_00389 PF03449 Transcription elongation factor, N-terminal AURUGA1_00390 PF14155 AURUGA1_00390 AURUGA1_00392 PF07739 TipAS antibiotic-recognition domain AURUGA1_00393 PF03006 AURUGA1_00393 AURUGA1_00394 PF01255 Putative undecaprenyl diphosphate synthase AURUGA1_00395 PF02562 PhoH-like protein AURUGA1_00395 PF13638 PIN domain AURUGA1_00396 PF01478 Type IV leader peptidase family AURUGA1_00397 PF00561 alpha/beta hydrolase fold AURUGA1_00398 PF03328 HpcH/HpaI aldolase/citrate lyase family AURUGA1_00401 PF01614 Bacterial transcriptional regulator AURUGA1_00401 PF09339 IclR helix-turn-helix domain AURUGA1_00402 PF00067 Cytochrome P450 AURUGA1_00403 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AURUGA1_00404 PF00391 PEP-utilising enzyme, mobile domain AURUGA1_00405 PF01966 HD domain AURUGA1_00406 PF13561 Enoyl-(Acyl carrier protein) reductase AURUGA1_00407 PF00111 2Fe-2S iron-sulfur cluster binding domain AURUGA1_00408 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURUGA1_00408 PF14759 Reductase C-terminal AURUGA1_00409 PF01966 HD domain AURUGA1_00410 PF00171 Aldehyde dehydrogenase family AURUGA1_00411 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) AURUGA1_00412 PF01494 FAD binding domain AURUGA1_00413 PF01614 Bacterial transcriptional regulator AURUGA1_00413 PF09339 IclR helix-turn-helix domain AURUGA1_00414 PF01614 Bacterial transcriptional regulator AURUGA1_00414 PF09339 IclR helix-turn-helix domain AURUGA1_00415 PF03737 Demethylmenaquinone methyltransferase AURUGA1_00416 PF04303 PrpF protein AURUGA1_00417 PF04909 Amidohydrolase AURUGA1_00418 PF04909 Amidohydrolase AURUGA1_00419 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AURUGA1_00420 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AURUGA1_00421 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AURUGA1_00422 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AURUGA1_00423 PF00248 Aldo/keto reductase family AURUGA1_00424 PF00206 Lyase AURUGA1_00424 PF10415 Fumarase C C-terminus AURUGA1_00425 PF00484 Carbonic anhydrase AURUGA1_00426 PF14030 AURUGA1_00426 AURUGA1_00427 PF02609 Exonuclease VII small subunit AURUGA1_00428 PF00107 Zinc-binding dehydrogenase AURUGA1_00428 PF08240 Alcohol dehydrogenase GroES-like domain AURUGA1_00429 PF02601 AURUGA1_00429 AURUGA1_00429 PF13742 AURUGA1_00429 AURUGA1_00430 PF02401 LytB protein AURUGA1_00432 PF01116 Fructose-bisphosphate aldolase class-II AURUGA1_00433 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AURUGA1_00434 PF07690 Major Facilitator Superfamily AURUGA1_00435 PF02646 AURUGA1_00435 AURUGA1_00436 PF00294 pfkB family carbohydrate kinase AURUGA1_00438 PF00171 Aldehyde dehydrogenase family AURUGA1_00439 PF04962 KduI/IolB family AURUGA1_00440 PF00205 Thiamine pyrophosphate enzyme, central domain AURUGA1_00440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AURUGA1_00440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AURUGA1_00441 PF01261 Xylose isomerase-like TIM barrel AURUGA1_00442 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AURUGA1_00443 PF01261 Xylose isomerase-like TIM barrel AURUGA1_00444 PF13407 Periplasmic binding protein domain AURUGA1_00445 PF02653 AURUGA1_00445 AURUGA1_00446 PF00005 ABC transporter AURUGA1_00449 PF00392 Bacterial regulatory proteins, gntR family AURUGA1_00449 PF07702 UTRA domain AURUGA1_00450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AURUGA1_00451 PF01261 Xylose isomerase-like TIM barrel AURUGA1_00452 PF03061 Thioesterase superfamily AURUGA1_00453 PF01926 50S ribosome-binding GTPase AURUGA1_00453 PF06071 Protein of unknown function (DUF933) AURUGA1_00454 PF01872 RibD C-terminal domain AURUGA1_00455 PF02586 Uncharacterised ACR, COG2135 AURUGA1_00457 PF06738 AURUGA1_00457 AURUGA1_00458 PF00106 short chain dehydrogenase AURUGA1_00459 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AURUGA1_00460 PF00106 short chain dehydrogenase AURUGA1_00461 PF08570 AURUGA1_00461 AURUGA1_00462 PF11127 Protein of unknown function (DUF2892) AURUGA1_00463 PF14117 AURUGA1_00463 AURUGA1_00464 PF08818 Domain of unknown function (DU1801) AURUGA1_00465 PF04832 SOUL heme-binding protein AURUGA1_00466 PF00266 Aminotransferase class-V AURUGA1_00467 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AURUGA1_00467 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AURUGA1_00468 PF00890 FAD binding domain AURUGA1_00468 PF02910 Fumarate reductase flavoprotein C-term AURUGA1_00469 PF02445 Quinolinate synthetase A protein AURUGA1_00470 PF00293 NUDIX domain AURUGA1_00471 PF01571 Aminomethyltransferase folate-binding domain AURUGA1_00471 PF08669 Glycine cleavage T-protein C-terminal barrel domain AURUGA1_00472 PF01597 Glycine cleavage H-protein AURUGA1_00473 PF02347 Glycine cleavage system P-protein AURUGA1_00474 PF01036 Bacteriorhodopsin-like protein AURUGA1_00475 PF00857 Isochorismatase family AURUGA1_00476 PF00440 Bacterial regulatory proteins, tetR family AURUGA1_00478 PF02517 CAAX protease self-immunity AURUGA1_00479 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AURUGA1_00480 PF00528 Binding-protein-dependent transport system inner membrane component AURUGA1_00481 PF00528 Binding-protein-dependent transport system inner membrane component AURUGA1_00481 PF12911 AURUGA1_00481 AURUGA1_00482 PF00005 ABC transporter AURUGA1_00482 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AURUGA1_00483 PF00009 Elongation factor Tu GTP binding domain AURUGA1_00483 PF00679 Elongation factor G C-terminus AURUGA1_00483 PF03144 Elongation factor Tu domain 2 AURUGA1_00484 PF03239 AURUGA1_00484 AURUGA1_00486 PF00037 4Fe-4S binding domain AURUGA1_00487 PF00155 Aminotransferase class I and II AURUGA1_00488 PF00285 Citrate synthase AURUGA1_00489 PF00107 Zinc-binding dehydrogenase AURUGA1_00489 PF08240 Alcohol dehydrogenase GroES-like domain AURUGA1_00490 PF14602 Hexapeptide repeat of succinyl-transferase AURUGA1_00490 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AURUGA1_00491 PF01546 Peptidase family M20/M25/M40 AURUGA1_00491 PF07687 Peptidase dimerisation domain AURUGA1_00493 PF11314 AURUGA1_00493 AURUGA1_00494 PF01596 O-methyltransferase AURUGA1_00495 PF02416 mttA/Hcf106 family AURUGA1_00496 PF03352 Methyladenine glycosylase AURUGA1_00497 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AURUGA1_00497 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AURUGA1_00498 PF00202 Aminotransferase class-III AURUGA1_00499 PF01037 AsnC family AURUGA1_00499 PF13404 AsnC-type helix-turn-helix domain AURUGA1_00500 PF00171 Aldehyde dehydrogenase family AURUGA1_00501 PF01883 Domain of unknown function DUF59 AURUGA1_00501 PF10609 ParA/MinD ATPase like AURUGA1_00502 PF06210 AURUGA1_00502 AURUGA1_00503 PF00571 CBS domain AURUGA1_00503 PF03448 MgtE intracellular N domain AURUGA1_00504 PF00171 Aldehyde dehydrogenase family AURUGA1_00504 PF01619 Proline dehydrogenase AURUGA1_00505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AURUGA1_00505 PF03466 LysR substrate binding domain AURUGA1_00507 PF00557 Metallopeptidase family M24 AURUGA1_00507 PF05195 Aminopeptidase P, N-terminal domain AURUGA1_00508 PF02811 PHP domain AURUGA1_00510 PF00892 EamA-like transporter family AURUGA1_00511 PF11139 AURUGA1_00511 AURUGA1_00512 PF00270 DEAD/DEAH box helicase AURUGA1_00512 PF00271 Helicase conserved C-terminal domain AURUGA1_00513 PF13794 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like AURUGA1_00514 PF11305 AURUGA1_00514 AURUGA1_00515 PF02515 CoA-transferase family III AURUGA1_00516 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AURUGA1_00516 PF02770 Acyl-CoA dehydrogenase, middle domain AURUGA1_00516 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AURUGA1_00517 PF00005 ABC transporter AURUGA1_00518 PF01061 AURUGA1_00518 AURUGA1_00519 PF12804 MobA-like NTP transferase domain AURUGA1_00520 PF11238 AURUGA1_00520 AURUGA1_00521 PF01177 Asp/Glu/Hydantoin racemase AURUGA1_00522 PF01138 3' exoribonuclease family, domain 1 AURUGA1_00522 PF03725 3' exoribonuclease family, domain 2 AURUGA1_00523 PF01725 Ham1 family AURUGA1_00524 PF00106 short chain dehydrogenase AURUGA1_00525 PF06089 AURUGA1_00525 AURUGA1_00526 PF00202 Aminotransferase class-III AURUGA1_00527 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AURUGA1_00527 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AURUGA1_00527 PF13288 DXP reductoisomerase C-terminal domain AURUGA1_00528 PF02163 Peptidase family M50 AURUGA1_00528 PF13180 PDZ domain AURUGA1_00529 PF04551 GcpE protein AURUGA1_00530 PF07690 Major Facilitator Superfamily AURUGA1_00531 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AURUGA1_00531 PF03129 Anticodon binding domain AURUGA1_00531 PF04073 Aminoacyl-tRNA editing domain AURUGA1_00532 PF00575 S1 RNA binding domain AURUGA1_00532 PF08529 NusA N-terminal domain AURUGA1_00532 PF13184 NusA-like KH domain AURUGA1_00533 PF04296 Protein of unknown function (DUF448) AURUGA1_00534 PF00009 Elongation factor Tu GTP binding domain AURUGA1_00534 PF04760 Translation initiation factor IF-2, N-terminal region AURUGA1_00534 PF11987 Translation-initiation factor 2 AURUGA1_00535 PF02033 Ribosome-binding factor A AURUGA1_00536 PF13239 AURUGA1_00536 AURUGA1_00537 PF00633 Helix-hairpin-helix motif AURUGA1_00537 PF00730 HhH-GPD superfamily base excision DNA repair protein AURUGA1_00537 PF10576 Iron-sulfur binding domain of endonuclease III AURUGA1_00538 PF04240 AURUGA1_00538 AURUGA1_00539 PF01509 TruB family pseudouridylate synthase (N terminal domain) AURUGA1_00539 PF09142 tRNA Pseudouridine synthase II, C terminal AURUGA1_00539 PF16198 AURUGA1_00539 AURUGA1_00542 PF01687 Riboflavin kinase AURUGA1_00542 PF06574 FAD synthetase AURUGA1_00543 PF00795 Carbon-nitrogen hydrolase AURUGA1_00544 PF00171 Aldehyde dehydrogenase family AURUGA1_00545 PF00206 Lyase AURUGA1_00545 PF10415 Fumarase C C-terminus AURUGA1_00546 PF00156 Phosphoribosyl transferase domain AURUGA1_00547 PF00248 Aldo/keto reductase family AURUGA1_00548 PF07969 Amidohydrolase family AURUGA1_00549 PF13520 Amino acid permease AURUGA1_00550 PF00392 Bacterial regulatory proteins, gntR family AURUGA1_00550 PF07729 FCD domain AURUGA1_00551 PF13561 Enoyl-(Acyl carrier protein) reductase AURUGA1_00552 PF00171 Aldehyde dehydrogenase family AURUGA1_00553 PF07722 Peptidase C26 AURUGA1_00554 PF00120 Glutamine synthetase, catalytic domain AURUGA1_00555 PF00324 Amino acid permease AURUGA1_00556 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AURUGA1_00557 PF02230 Phospholipase/Carboxylesterase AURUGA1_00558 PF02594 Uncharacterised ACR, YggU family COG1872 AURUGA1_00559 PF05656 AURUGA1_00559 AURUGA1_00560 PF05656 AURUGA1_00560 AURUGA1_00561 PF00312 Ribosomal protein S15 AURUGA1_00562 PF00013 KH domain AURUGA1_00562 PF00575 S1 RNA binding domain AURUGA1_00562 PF01138 3' exoribonuclease family, domain 1 AURUGA1_00562 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AURUGA1_00563 PF00248 Aldo/keto reductase family AURUGA1_00564 PF00675 Insulinase (Peptidase family M16) AURUGA1_00564 PF05193 Peptidase M16 inactive domain AURUGA1_00565 PF00300 Histidine phosphatase superfamily (branch 1) AURUGA1_00566 PF01113 Dihydrodipicolinate reductase, N-terminus AURUGA1_00566 PF05173 Dihydrodipicolinate reductase, C-terminus AURUGA1_00568 PF01551 Peptidase family M23 AURUGA1_00569 PF07690 Major Facilitator Superfamily AURUGA1_00570 PF00318 Ribosomal protein S2 AURUGA1_00571 PF00889 Elongation factor TS AURUGA1_00572 PF00696 Amino acid kinase family AURUGA1_00573 PF01765 Ribosome recycling factor AURUGA1_00574 PF01148 Cytidylyltransferase family AURUGA1_00578 PF12697 Alpha/beta hydrolase family AURUGA1_00579 PF01594 AURUGA1_00579 AURUGA1_00580 PF05103 DivIVA protein AURUGA1_00582 PF00085 Thioredoxin AURUGA1_00582 PF14561 Tetratricopeptide repeat AURUGA1_00583 PF00128 Alpha amylase, catalytic domain AURUGA1_00583 PF02806 Alpha amylase, C-terminal all-beta domain AURUGA1_00583 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AURUGA1_00584 PF11896 Domain of unknown function (DUF3416) AURUGA1_00585 PF00128 Alpha amylase, catalytic domain AURUGA1_00586 PF00266 Aminotransferase class-V AURUGA1_00587 PF03054 tRNA methyl transferase AURUGA1_00588 PF00533 BRCA1 C Terminus (BRCT) domain AURUGA1_00588 PF01653 NAD-dependent DNA ligase adenylation domain AURUGA1_00588 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AURUGA1_00588 PF03120 NAD-dependent DNA ligase OB-fold domain AURUGA1_00588 PF12826 Helix-hairpin-helix motif AURUGA1_00589 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) AURUGA1_00590 PF00440 Bacterial regulatory proteins, tetR family AURUGA1_00591 PF02686 Glu-tRNAGln amidotransferase C subunit AURUGA1_00592 PF01425 Amidase AURUGA1_00593 PF02637 GatB domain AURUGA1_00593 PF02934 GatB/GatE catalytic domain AURUGA1_00595 PF00817 impB/mucB/samB family AURUGA1_00595 PF11798 IMS family HHH motif AURUGA1_00595 PF11799 impB/mucB/samB family C-terminal domain AURUGA1_00596 PF09819 AURUGA1_00596 AURUGA1_00597 PF00005 ABC transporter AURUGA1_00598 PF02361 Cobalt transport protein AURUGA1_00599 PF13238 AAA domain AURUGA1_00603 PF00929 Exonuclease AURUGA1_00604 PF00171 Aldehyde dehydrogenase family AURUGA1_00606 PF00892 EamA-like transporter family AURUGA1_00607 PF01625 Peptide methionine sulfoxide reductase AURUGA1_00608 PF00436 Single-strand binding protein family AURUGA1_00610 PF00005 ABC transporter AURUGA1_00610 PF12848 ABC transporter AURUGA1_00611 PF13279 Thioesterase-like superfamily AURUGA1_00612 PF00355 Rieske [2Fe-2S] domain AURUGA1_00613 PF13622 Thioesterase-like superfamily AURUGA1_00615 PF01152 Bacterial-like globin AURUGA1_00616 PF00924 Mechanosensitive ion channel AURUGA1_00617 PF01433 Peptidase family M1 AURUGA1_00617 PF11838 ERAP1-like C-terminal domain AURUGA1_00618 PF02502 Ribose/Galactose Isomerase AURUGA1_00619 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AURUGA1_00619 PF06827 Zinc finger found in FPG and IleRS AURUGA1_00619 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AURUGA1_00620 PF07969 Amidohydrolase family AURUGA1_00622 PF00817 impB/mucB/samB family AURUGA1_00622 PF11799 impB/mucB/samB family C-terminal domain AURUGA1_00622 PF13438 AURUGA1_00622 AURUGA1_00623 PF00717 Peptidase S24-like AURUGA1_00626 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AURUGA1_00626 PF05697 Bacterial trigger factor protein (TF) AURUGA1_00626 PF05698 Bacterial trigger factor protein (TF) C-terminus AURUGA1_00627 PF01810 AURUGA1_00627 AURUGA1_00628 PF13453 AURUGA1_00628 AURUGA1_00629 PF00574 Clp protease AURUGA1_00630 PF00574 Clp protease AURUGA1_00631 PF06689 ClpX C4-type zinc finger AURUGA1_00631 PF07724 AAA domain (Cdc48 subfamily) AURUGA1_00631 PF10431 C-terminal, D2-small domain, of ClpB protein AURUGA1_00632 PF02219 Methylenetetrahydrofolate reductase AURUGA1_00633 PF00717 Peptidase S24-like AURUGA1_00633 PF01726 LexA DNA binding domain AURUGA1_00635 PF00155 Aminotransferase class I and II AURUGA1_00636 PF00475 Imidazoleglycerol-phosphate dehydratase AURUGA1_00637 PF00117 Glutamine amidotransferase class-I AURUGA1_00638 PF00977 Histidine biosynthesis protein AURUGA1_00639 PF07179 AURUGA1_00639 AURUGA1_00640 PF12698 ABC-2 family transporter protein AURUGA1_00641 PF03176 MMPL family AURUGA1_00642 PF00440 Bacterial regulatory proteins, tetR family AURUGA1_00644 PF00707 Translation initiation factor IF-3, C-terminal domain AURUGA1_00644 PF05198 Translation initiation factor IF-3, N-terminal domain AURUGA1_00645 PF01632 Ribosomal protein L35 AURUGA1_00646 PF00453 Ribosomal protein L20 AURUGA1_00647 PF00588 SpoU rRNA Methylase family AURUGA1_00647 PF08032 RNA 2'-O ribose methyltransferase substrate binding AURUGA1_00648 PF01409 tRNA synthetases class II core domain (F) AURUGA1_00648 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AURUGA1_00649 PF01588 Putative tRNA binding domain AURUGA1_00649 PF03147 Ferredoxin-fold anticodon binding domain AURUGA1_00649 PF03483 B3/4 domain AURUGA1_00649 PF03484 tRNA synthetase B5 domain AURUGA1_00651 PF01118 Semialdehyde dehydrogenase, NAD binding domain AURUGA1_00651 PF02774 Semialdehyde dehydrogenase, dimerisation domain AURUGA1_00652 PF01960 ArgJ family AURUGA1_00653 PF00696 Amino acid kinase family AURUGA1_00654 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AURUGA1_00654 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AURUGA1_00656 PF00206 Lyase AURUGA1_00656 PF14698 Argininosuccinate lyase C-terminal AURUGA1_00657 PF00579 tRNA synthetases class I (W and Y) AURUGA1_00658 PF00733 Asparagine synthase AURUGA1_00658 PF13537 Glutamine amidotransferase domain AURUGA1_00660 PF01177 Asp/Glu/Hydantoin racemase AURUGA1_00666 PF13242 HAD-hyrolase-like AURUGA1_00666 PF13344 Haloacid dehalogenase-like hydrolase AURUGA1_00667 PF00474 Sodium:solute symporter family AURUGA1_00668 PF04341 AURUGA1_00668 AURUGA1_00669 PF00501 AMP-binding enzyme AURUGA1_00669 PF13193 AMP-binding enzyme C-terminal domain AURUGA1_00669 PF16177 AURUGA1_00669 AURUGA1_00670 PF00392 Bacterial regulatory proteins, gntR family AURUGA1_00670 PF07729 FCD domain AURUGA1_00671 PF03972 MmgE/PrpD family AURUGA1_00672 PF13714 Phosphoenolpyruvate phosphomutase AURUGA1_00673 PF00285 Citrate synthase AURUGA1_00675 PF01479 S4 domain AURUGA1_00675 PF01728 FtsJ-like methyltransferase AURUGA1_00676 PF01513 ATP-NAD kinase AURUGA1_00677 PF02463 RecF/RecN/SMC N terminal domain AURUGA1_00678 PF00117 Glutamine amidotransferase class-I AURUGA1_00678 PF06418 CTP synthase N-terminus AURUGA1_00679 PF00293 NUDIX domain AURUGA1_00680 PF00589 Phage integrase family AURUGA1_00680 PF02899 Phage integrase, N-terminal SAM-like domain AURUGA1_00681 PF13614 AAA domain AURUGA1_00682 PF02616 ScpA/B protein AURUGA1_00683 PF04079 Putative transcriptional regulators (Ypuh-like) AURUGA1_00684 PF00849 RNA pseudouridylate synthase AURUGA1_00684 PF01479 S4 domain AURUGA1_00685 PF02153 Prephenate dehydrogenase AURUGA1_00686 PF02224 Cytidylate kinase AURUGA1_00687 PF01926 50S ribosome-binding GTPase AURUGA1_00687 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AURUGA1_00688 PF00293 NUDIX domain AURUGA1_00689 PF06736 AURUGA1_00689 AURUGA1_00692 PF01040 UbiA prenyltransferase family AURUGA1_00693 PF13450 NAD(P)-binding Rossmann-like domain AURUGA1_00694 PF05977 Transmembrane secretion effector AURUGA1_00695 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AURUGA1_00696 PF09966 Uncharacterized protein conserved in bacteria (DUF2200) AURUGA1_00697 PF07969 Amidohydrolase family AURUGA1_00698 PF00484 Carbonic anhydrase AURUGA1_00699 PF01042 Endoribonuclease L-PSP AURUGA1_00700 PF03928 Domain of unknown function (DUF336) AURUGA1_00701 PF01810 AURUGA1_00701 AURUGA1_00702 PF00892 EamA-like transporter family AURUGA1_00703 PF00356 Bacterial regulatory proteins, lacI family AURUGA1_00703 PF13377 Periplasmic binding protein-like domain AURUGA1_00704 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AURUGA1_00704 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AURUGA1_00705 PF00892 EamA-like transporter family AURUGA1_00706 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AURUGA1_00707 PF00270 DEAD/DEAH box helicase AURUGA1_00707 PF00271 Helicase conserved C-terminal domain AURUGA1_00708 PF00498 FHA domain AURUGA1_00709 PF00376 MerR family regulatory protein AURUGA1_00710 PF13411 MerR HTH family regulatory protein AURUGA1_00711 PF13614 AAA domain AURUGA1_00712 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AURUGA1_00712 PF00364 Biotin-requiring enzyme AURUGA1_00712 PF00682 HMGL-like AURUGA1_00712 PF02436 Conserved carboxylase domain AURUGA1_00712 PF02785 Biotin carboxylase C-terminal domain AURUGA1_00712 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AURUGA1_00713 PF17210 AURUGA1_00713 AURUGA1_00714 PF13614 AAA domain AURUGA1_00715 PF01327 Polypeptide deformylase AURUGA1_00716 PF00501 AMP-binding enzyme AURUGA1_00717 PF00480 ROK family AURUGA1_00718 PF01553 Acyltransferase AURUGA1_00719 PF01474 Class-II DAHP synthetase family AURUGA1_00720 PF13520 Amino acid permease AURUGA1_00721 PF09968 Uncharacterized protein domain (DUF2202) AURUGA1_00722 PF14340 AURUGA1_00722 AURUGA1_00723 PF04191 Phospholipid methyltransferase AURUGA1_00724 PF00085 Thioredoxin AURUGA1_00725 PF01345 AURUGA1_00725 AURUGA1_00727 PF00133 tRNA synthetases class I (I, L, M and V) AURUGA1_00727 PF08264 Anticodon-binding domain of tRNA AURUGA1_00728 PF00133 tRNA synthetases class I (I, L, M and V) AURUGA1_00728 PF08264 Anticodon-binding domain of tRNA AURUGA1_00729 PF02875 Mur ligase family, glutamate ligase domain AURUGA1_00729 PF08245 Mur ligase middle domain AURUGA1_00730 PF14017 AURUGA1_00730 AURUGA1_00731 PF00334 Nucleoside diphosphate kinase AURUGA1_00732 PF07690 Major Facilitator Superfamily AURUGA1_00733 PF07884 Vitamin K epoxide reductase family AURUGA1_00738 PF01016 Ribosomal L27 protein AURUGA1_00742 PF00696 Amino acid kinase family AURUGA1_00743 PF00696 Amino acid kinase family AURUGA1_00745 PF00171 Aldehyde dehydrogenase family AURUGA1_00747 PF01467 Cytidylyltransferase AURUGA1_00749 PF02410 Oligomerisation domain AURUGA1_00751 PF03831 PhnA protein AURUGA1_00751 PF08274 PhnA Zinc-Ribbon AURUGA1_00752 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family AURUGA1_00752 PF13224 AURUGA1_00752 AURUGA1_00753 PF00005 ABC transporter AURUGA1_00753 PF08402 TOBE domain AURUGA1_00754 PF00296 Luciferase-like monooxygenase AURUGA1_00755 PF00581 Rhodanese-like domain AURUGA1_00755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AURUGA1_00755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURUGA1_00756 PF02583 Metal-sensitive transcriptional repressor AURUGA1_00757 PF00933 Glycosyl hydrolase family 3 N terminal domain AURUGA1_00758 PF06081 AURUGA1_00758 AURUGA1_00759 PF10531 SLBB domain AURUGA1_00759 PF12836 Helix-hairpin-helix motif AURUGA1_00760 PF00753 Metallo-beta-lactamase superfamily AURUGA1_00760 PF03772 AURUGA1_00760 AURUGA1_00761 PF06144 DNA polymerase III, delta subunit AURUGA1_00762 PF01649 Ribosomal protein S20 AURUGA1_00763 PF00009 Elongation factor Tu GTP binding domain AURUGA1_00763 PF00679 Elongation factor G C-terminus AURUGA1_00763 PF06421 GTP-binding protein LepA C-terminus AURUGA1_00764 PF09348 AURUGA1_00764 AURUGA1_00765 PF04055 Radical SAM superfamily AURUGA1_00766 PF01628 HrcA protein C terminal domain AURUGA1_00767 PF00226 DnaJ domain AURUGA1_00767 PF00684 DnaJ central domain AURUGA1_00767 PF01556 DnaJ C terminal domain AURUGA1_00768 PF04452 RNA methyltransferase AURUGA1_00769 PF11969 Scavenger mRNA decapping enzyme C-term binding AURUGA1_00770 PF02562 PhoH-like protein AURUGA1_00771 PF02130 Uncharacterized protein family UPF0054 AURUGA1_00772 PF00571 CBS domain AURUGA1_00772 PF01595 AURUGA1_00772 AURUGA1_00772 PF03471 Transporter associated domain AURUGA1_00773 PF01926 50S ribosome-binding GTPase AURUGA1_00773 PF07650 KH domain AURUGA1_00774 PF00682 HMGL-like AURUGA1_00774 PF08502 LeuA allosteric (dimerisation) domain AURUGA1_00775 PF02104 AURUGA1_00775 AURUGA1_00776 PF11298 AURUGA1_00776 AURUGA1_00777 PF13561 Enoyl-(Acyl carrier protein) reductase AURUGA1_00778 PF12710 haloacid dehalogenase-like hydrolase AURUGA1_00779 PF00483 Nucleotidyl transferase AURUGA1_00780 PF00534 Glycosyl transferases group 1 AURUGA1_00780 PF13439 Glycosyltransferase Family 4 AURUGA1_00781 PF00005 ABC transporter AURUGA1_00782 PF01197 Ribosomal protein L31 AURUGA1_00783 PF00929 Exonuclease AURUGA1_00784 PF12697 Alpha/beta hydrolase family AURUGA1_00785 PF00534 Glycosyl transferases group 1 AURUGA1_00785 PF13439 Glycosyltransferase Family 4 AURUGA1_00786 PF02146 Sir2 family AURUGA1_00787 PF00588 SpoU rRNA Methylase family AURUGA1_00788 PF04851 Type III restriction enzyme, res subunit AURUGA1_00791 PF02673 AURUGA1_00791 AURUGA1_00792 PF09754 PAC2 family AURUGA1_00793 PF13419 Haloacid dehalogenase-like hydrolase AURUGA1_00794 PF08704 tRNA methyltransferase complex GCD14 subunit AURUGA1_00794 PF14801 tRNA methyltransferase complex GCD14 subunit N-term AURUGA1_00795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AURUGA1_00796 PF13280 AURUGA1_00796 AURUGA1_00797 PF13280 AURUGA1_00797 AURUGA1_00798 PF02416 mttA/Hcf106 family AURUGA1_00799 PF00902 Sec-independent protein translocase protein (TatC) AURUGA1_00800 PF00270 DEAD/DEAH box helicase AURUGA1_00800 PF00271 Helicase conserved C-terminal domain AURUGA1_00800 PF08148 DSHCT (NUC185) domain AURUGA1_00800 PF13234 rRNA-processing arch domain AURUGA1_00801 PF00795 Carbon-nitrogen hydrolase AURUGA1_00802 PF02811 PHP domain AURUGA1_00802 PF07733 Bacterial DNA polymerase III alpha subunit AURUGA1_00802 PF14579 Helix-hairpin-helix motif AURUGA1_00803 PF00815 Histidinol dehydrogenase AURUGA1_00804 PF03477 ATP cone domain AURUGA1_00805 PF01180 Dihydroorotate dehydrogenase AURUGA1_00806 PF11241 AURUGA1_00806 AURUGA1_00807 PF01546 Peptidase family M20/M25/M40 AURUGA1_00807 PF07687 Peptidase dimerisation domain AURUGA1_00808 PF01521 Iron-sulphur cluster biosynthesis AURUGA1_00809 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AURUGA1_00810 PF00115 Cytochrome C and Quinol oxidase polypeptide I AURUGA1_00811 PF12270 AURUGA1_00811 AURUGA1_00812 PF13631 Cytochrome b(N-terminal)/b6/petB AURUGA1_00813 PF00355 Rieske [2Fe-2S] domain AURUGA1_00814 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AURUGA1_00815 PF00510 Cytochrome c oxidase subunit III AURUGA1_00816 PF00591 Glycosyl transferase family, a/b domain AURUGA1_00816 PF02885 Glycosyl transferase family, helical bundle domain AURUGA1_00817 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AURUGA1_00817 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AURUGA1_00818 PF07690 Major Facilitator Superfamily AURUGA1_00819 PF07690 Major Facilitator Superfamily AURUGA1_00820 PF03729 AURUGA1_00820 AURUGA1_00821 PF00293 NUDIX domain AURUGA1_00822 PF00106 short chain dehydrogenase AURUGA1_00823 PF03009 Glycerophosphoryl diester phosphodiesterase family AURUGA1_00824 PF01541 GIY-YIG catalytic domain AURUGA1_00824 PF02151 UvrB/uvrC motif AURUGA1_00824 PF08459 UvrC Helix-hairpin-helix N-terminal AURUGA1_00824 PF14520 Helix-hairpin-helix domain AURUGA1_00825 PF00005 ABC transporter AURUGA1_00826 PF00271 Helicase conserved C-terminal domain AURUGA1_00826 PF02151 UvrB/uvrC motif AURUGA1_00826 PF04851 Type III restriction enzyme, res subunit AURUGA1_00826 PF12344 Ultra-violet resistance protein B AURUGA1_00827 PF01121 Dephospho-CoA kinase AURUGA1_00828 PF00575 S1 RNA binding domain AURUGA1_00829 PF00476 DNA polymerase family A AURUGA1_00829 PF01367 5'-3' exonuclease, C-terminal SAM fold AURUGA1_00829 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AURUGA1_00830 PF03061 Thioesterase superfamily AURUGA1_00831 PF00072 Response regulator receiver domain AURUGA1_00831 PF03861 ANTAR domain AURUGA1_00833 PF00224 Pyruvate kinase, barrel domain AURUGA1_00833 PF02887 Pyruvate kinase, alpha/beta domain AURUGA1_00834 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURUGA1_00834 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AURUGA1_00835 PF00310 Glutamine amidotransferases class-II AURUGA1_00835 PF01493 GXGXG motif AURUGA1_00835 PF01645 Conserved region in glutamate synthase AURUGA1_00835 PF04898 Glutamate synthase central domain AURUGA1_00836 PF01790 AURUGA1_00836 AURUGA1_00837 PF00290 Tryptophan synthase alpha chain AURUGA1_00838 PF00291 Pyridoxal-phosphate dependent enzyme AURUGA1_00839 PF00218 Indole-3-glycerol phosphate synthase AURUGA1_00841 PF09534 AURUGA1_00841 AURUGA1_00842 PF00425 chorismate binding enzyme AURUGA1_00842 PF04715 Anthranilate synthase component I, N terminal region AURUGA1_00843 PF01502 Phosphoribosyl-AMP cyclohydrolase AURUGA1_00844 PF00977 Histidine biosynthesis protein AURUGA1_00845 PF01634 ATP phosphoribosyltransferase AURUGA1_00845 PF08029 HisG, C-terminal domain AURUGA1_00846 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AURUGA1_00847 PF00834 Ribulose-phosphate 3 epimerase family AURUGA1_00848 PF01029 NusB family AURUGA1_00848 PF01189 NOL1/NOP2/sun family AURUGA1_00849 PF00551 Formyl transferase AURUGA1_00849 PF02911 Formyl transferase, C-terminal domain AURUGA1_00851 PF00438 S-adenosylmethionine synthetase, N-terminal domain AURUGA1_00851 PF02772 S-adenosylmethionine synthetase, central domain AURUGA1_00851 PF02773 S-adenosylmethionine synthetase, C-terminal domain AURUGA1_00852 PF02441 Flavoprotein AURUGA1_00852 PF04127 DNA / pantothenate metabolism flavoprotein AURUGA1_00853 PF01192 RNA polymerase Rpb6 AURUGA1_00854 PF00625 Guanylate kinase AURUGA1_00855 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AURUGA1_00856 PF02142 MGS-like domain AURUGA1_00856 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AURUGA1_00856 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AURUGA1_00857 PF00117 Glutamine amidotransferase class-I AURUGA1_00857 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AURUGA1_00859 PF01979 Amidohydrolase family AURUGA1_00860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AURUGA1_00860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AURUGA1_00861 PF00156 Phosphoribosyl transferase domain AURUGA1_00862 PF01029 NusB family AURUGA1_00863 PF01132 Elongation factor P (EF-P) OB domain AURUGA1_00863 PF08207 Elongation factor P (EF-P) KOW-like domain AURUGA1_00863 PF09285 Elongation factor P, C-terminal AURUGA1_00864 PF01220 Dehydroquinase class II AURUGA1_00865 PF01761 3-dehydroquinate synthase AURUGA1_00866 PF01202 Shikimate kinase AURUGA1_00867 PF01264 Chorismate synthase AURUGA1_00868 PF08501 Shikimate dehydrogenase substrate binding domain AURUGA1_00869 PF02618 YceG-like family AURUGA1_00870 PF03652 Uncharacterised protein family (UPF0081) AURUGA1_00871 PF01411 tRNA synthetases class II (A) AURUGA1_00871 PF02272 DHHA1 domain AURUGA1_00871 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AURUGA1_00873 PF00163 Ribosomal protein S4/S9 N-terminal domain AURUGA1_00873 PF01479 S4 domain AURUGA1_00874 PF00004 ATPase family associated with various cellular activities (AAA) AURUGA1_00874 PF12002 MgsA AAA+ ATPase C terminal AURUGA1_00874 PF16193 AURUGA1_00874 AURUGA1_00875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AURUGA1_00876 PF03993 AURUGA1_00876 AURUGA1_00878 PF02824 TGS domain AURUGA1_00878 PF04607 Region found in RelA / SpoT proteins AURUGA1_00878 PF13291 ACT domain AURUGA1_00878 PF13328 HD domain AURUGA1_00879 PF02355 Protein export membrane protein AURUGA1_00879 PF07549 SecD/SecF GG Motif AURUGA1_00880 PF02355 Protein export membrane protein AURUGA1_00881 PF02699 Preprotein translocase subunit AURUGA1_00882 PF05491 Holliday junction DNA helicase ruvB C-terminus AURUGA1_00882 PF05496 Holliday junction DNA helicase ruvB N-terminus AURUGA1_00883 PF01330 RuvA N terminal domain AURUGA1_00883 PF07499 RuvA, C-terminal domain AURUGA1_00883 PF14520 Helix-hairpin-helix domain AURUGA1_00884 PF02075 Crossover junction endodeoxyribonuclease RuvC AURUGA1_00885 PF01709 Transcriptional regulator AURUGA1_00886 PF01174 SNO glutamine amidotransferase family AURUGA1_00887 PF01680 SOR/SNZ family AURUGA1_00888 PF01230 HIT domain AURUGA1_00889 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AURUGA1_00889 PF03129 Anticodon binding domain AURUGA1_00889 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AURUGA1_00893 PF00909 Ammonium Transporter Family AURUGA1_00894 PF00909 Ammonium Transporter Family AURUGA1_00895 PF03969 AFG1-like ATPase AURUGA1_00896 PF00581 Rhodanese-like domain AURUGA1_00897 PF02657 Fe-S metabolism associated domain AURUGA1_00898 PF01872 RibD C-terminal domain AURUGA1_00899 PF11452 AURUGA1_00899 AURUGA1_00900 PF00570 HRDC domain AURUGA1_00900 PF01612 3'-5' exonuclease AURUGA1_00901 PF00108 Thiolase, N-terminal domain AURUGA1_00901 PF02803 Thiolase, C-terminal domain AURUGA1_00902 PF00378 Enoyl-CoA hydratase/isomerase family AURUGA1_00902 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AURUGA1_00902 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AURUGA1_00903 PF02779 Transketolase, pyrimidine binding domain AURUGA1_00903 PF02780 Transketolase, C-terminal domain AURUGA1_00903 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AURUGA1_00904 PF00330 Aconitase family (aconitate hydratase) AURUGA1_00904 PF00694 Aconitase C-terminal domain AURUGA1_00905 PF11361 AURUGA1_00905 AURUGA1_00906 PF12502 AURUGA1_00906 AURUGA1_00907 PF00692 dUTPase AURUGA1_00908 PF11292 AURUGA1_00908 AURUGA1_00909 PF13834 AURUGA1_00909 AURUGA1_00910 PF11268 AURUGA1_00910 AURUGA1_00911 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AURUGA1_00912 PF00521 DNA gyrase/topoisomerase IV, subunit A AURUGA1_00912 PF03989 DNA gyrase C-terminal domain, beta-propeller AURUGA1_00913 PF00204 DNA gyrase B AURUGA1_00913 PF00986 DNA gyrase B subunit, carboxyl terminus AURUGA1_00913 PF01751 Toprim domain AURUGA1_00913 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURUGA1_00915 PF00140 Sigma-70 factor, region 1 AURUGA1_00915 PF04539 Sigma-70 region 3 AURUGA1_00915 PF04542 Sigma-70 region 2 AURUGA1_00915 PF04545 Sigma-70, region 4 AURUGA1_00916 PF09754 PAC2 family AURUGA1_00917 PF00883 Cytosol aminopeptidase family, catalytic domain AURUGA1_00917 PF02789 Cytosol aminopeptidase family, N-terminal domain AURUGA1_00918 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AURUGA1_00918 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURUGA1_00919 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AURUGA1_00919 PF00364 Biotin-requiring enzyme AURUGA1_00919 PF02817 e3 binding domain AURUGA1_00921 PF03099 Biotin/lipoate A/B protein ligase family AURUGA1_00922 PF04055 Radical SAM superfamily AURUGA1_00923 PF13829 AURUGA1_00923 AURUGA1_00924 PF06271 AURUGA1_00924 AURUGA1_00925 PF00120 Glutamine synthetase, catalytic domain AURUGA1_00925 PF03951 Glutamine synthetase, beta-Grasp domain AURUGA1_00926 PF03710 Glutamate-ammonia ligase adenylyltransferase AURUGA1_00926 PF08335 GlnD PII-uridylyltransferase AURUGA1_00927 PF00120 Glutamine synthetase, catalytic domain AURUGA1_00927 PF03951 Glutamine synthetase, beta-Grasp domain AURUGA1_00928 PF00795 Carbon-nitrogen hydrolase AURUGA1_00928 PF02540 NAD synthase AURUGA1_00929 PF02548 Ketopantoate hydroxymethyltransferase AURUGA1_00931 PF00557 Metallopeptidase family M24 AURUGA1_00932 PF00480 ROK family AURUGA1_00933 PF13456 Reverse transcriptase-like AURUGA1_00935 PF01784 NIF3 (NGG1p interacting factor 3) AURUGA1_00938 PF00578 AhpC/TSA family AURUGA1_00939 PF00456 Transketolase, thiamine diphosphate binding domain AURUGA1_00940 PF13556 PucR C-terminal helix-turn-helix domain AURUGA1_00941 PF00698 Acyl transferase domain AURUGA1_00942 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AURUGA1_00942 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AURUGA1_00943 PF00550 Phosphopantetheine attachment site AURUGA1_00944 PF00109 Beta-ketoacyl synthase, N-terminal domain AURUGA1_00944 PF02801 Beta-ketoacyl synthase, C-terminal domain AURUGA1_00945 PF11343 AURUGA1_00945 AURUGA1_00946 PF03551 Transcriptional regulator PadR-like family AURUGA1_00947 PF07920 Protein of unknown function (DUF1684) AURUGA1_00949 PF00072 Response regulator receiver domain AURUGA1_00949 PF00196 Bacterial regulatory proteins, luxR family AURUGA1_00950 PF00440 Bacterial regulatory proteins, tetR family AURUGA1_00951 PF00141 Peroxidase AURUGA1_00953 PF00534 Glycosyl transferases group 1 AURUGA1_00953 PF13439 Glycosyltransferase Family 4 AURUGA1_00954 PF05653 AURUGA1_00954 AURUGA1_00955 PF01327 Polypeptide deformylase AURUGA1_00956 PF05437 AURUGA1_00956 AURUGA1_00957 PF03591 AURUGA1_00957 AURUGA1_00959 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AURUGA1_00960 PF01807 CHC2 zinc finger AURUGA1_00960 PF08275 DNA primase catalytic core, N-terminal domain AURUGA1_00960 PF08278 DNA primase DnaG DnaB-binding AURUGA1_00960 PF10410 DnaB-helicase binding domain of primase AURUGA1_00960 PF13662 Toprim domain AURUGA1_00961 PF01966 HD domain AURUGA1_00961 PF13286 Phosphohydrolase-associated domain AURUGA1_00962 PF01207 Dihydrouridine synthase (Dus) AURUGA1_00963 PF01323 DSBA-like thioredoxin domain AURUGA1_00965 PF01255 Putative undecaprenyl diphosphate synthase AURUGA1_00966 PF02565 Recombination protein O C terminal AURUGA1_00966 PF11967 Recombination protein O N terminal AURUGA1_00967 PF03458 AURUGA1_00967 AURUGA1_00969 PF00005 ABC transporter AURUGA1_00970 PF02632 BioY family AURUGA1_00971 PF01053 Cys/Met metabolism PLP-dependent enzyme AURUGA1_00972 PF01883 Domain of unknown function DUF59 AURUGA1_00973 PF00005 ABC transporter AURUGA1_00974 PF00355 Rieske [2Fe-2S] domain AURUGA1_00975 PF01458 Uncharacterized protein family (UPF0051) AURUGA1_00976 PF01458 Uncharacterized protein family (UPF0051) AURUGA1_00977 PF02628 AURUGA1_00977 AURUGA1_00978 PF01040 UbiA prenyltransferase family AURUGA1_009782 PF00342 Phosphoglucose isomerase AURUGA1_00980 PF00456 Transketolase, thiamine diphosphate binding domain AURUGA1_00980 PF02779 Transketolase, pyrimidine binding domain AURUGA1_00980 PF02780 Transketolase, C-terminal domain AURUGA1_00981 PF00923 Transaldolase AURUGA1_00983 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AURUGA1_00983 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AURUGA1_00984 PF10128 AURUGA1_00984 AURUGA1_00985 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AURUGA1_00986 PF13397 Domain of unknown function (DUF4109) AURUGA1_00987 PF03840 Preprotein translocase SecG subunit AURUGA1_00988 PF00121 Triosephosphate isomerase AURUGA1_00989 PF00162 Phosphoglycerate kinase AURUGA1_00990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AURUGA1_00990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AURUGA1_00991 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AURUGA1_00991 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AURUGA1_00992 PF02650 WhiA C-terminal HTH domain AURUGA1_00992 PF10298 WhiA N-terminal LAGLIDADG-like domain AURUGA1_00992 PF14527 WhiA LAGLIDADG-like domain AURUGA1_00993 PF03668 AURUGA1_00993 AURUGA1_00994 PF00849 RNA pseudouridylate synthase AURUGA1_00995 PF01252 AURUGA1_00995 AURUGA1_00996 PF05103 DivIVA protein AURUGA1_00997 PF02325 AURUGA1_00997 AURUGA1_00998 PF04472 Protein of unknown function (DUF552) AURUGA1_00999 PF01168 Alanine racemase, N-terminal domain AURUGA1_01000 PF00091 Tubulin/FtsZ family, GTPase domain AURUGA1_01000 PF12327 FtsZ family, C-terminal domain AURUGA1_01001 PF03799 Cell division protein FtsQ AURUGA1_01001 PF08478 POTRA domain, FtsQ-type AURUGA1_01002 PF01225 Mur ligase family, catalytic domain AURUGA1_01002 PF02875 Mur ligase family, glutamate ligase domain AURUGA1_01002 PF08245 Mur ligase middle domain AURUGA1_01003 PF03033 Glycosyltransferase family 28 N-terminal domain AURUGA1_01003 PF04101 Glycosyltransferase family 28 C-terminal domain AURUGA1_01004 PF01098 AURUGA1_01004 AURUGA1_01005 PF02875 Mur ligase family, glutamate ligase domain AURUGA1_01005 PF08245 Mur ligase middle domain AURUGA1_01006 PF00953 Glycosyl transferase family 4 AURUGA1_01006 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AURUGA1_01007 PF01225 Mur ligase family, catalytic domain AURUGA1_01007 PF02875 Mur ligase family, glutamate ligase domain AURUGA1_01007 PF08245 Mur ligase middle domain AURUGA1_01008 PF00905 Penicillin binding protein transpeptidase domain AURUGA1_01008 PF03717 Penicillin-binding Protein dimerisation domain AURUGA1_01010 PF01795 MraW methylase family AURUGA1_01011 PF02381 MraZ protein AURUGA1_01012 PF11239 AURUGA1_01012 AURUGA1_01013 PF00348 Polyprenyl synthetase AURUGA1_01015 PF01476 LysM domain AURUGA1_01016 PF00069 Protein kinase domain AURUGA1_01016 PF03793 PASTA domain AURUGA1_01017 PF00133 tRNA synthetases class I (I, L, M and V) AURUGA1_01017 PF08264 Anticodon-binding domain of tRNA AURUGA1_01017 PF09334 tRNA synthetases class I (M) AURUGA1_01017 PF13603 Leucyl-tRNA synthetase, Domain 2 AURUGA1_01018 PF00425 chorismate binding enzyme AURUGA1_01018 PF04715 Anthranilate synthase component I, N terminal region AURUGA1_01019 PF01063 Aminotransferase class IV AURUGA1_01020 PF09335 AURUGA1_01020 AURUGA1_01021 PF09949 AURUGA1_01021 AURUGA1_01022 PF01926 50S ribosome-binding GTPase AURUGA1_01022 PF13167 AURUGA1_01022 AURUGA1_01022 PF16360 AURUGA1_01022 AURUGA1_01025 PF05175 Methyltransferase small domain AURUGA1_01027 PF01678 Diaminopimelate epimerase AURUGA1_01028 PF01715 IPP transferase AURUGA1_01029 PF00919 Uncharacterized protein family UPF0004 AURUGA1_01029 PF04055 Radical SAM superfamily AURUGA1_01031 PF02631 RecX family AURUGA1_01032 PF00154 recA bacterial DNA recombination protein AURUGA1_01034 PF13560 Helix-turn-helix domain AURUGA1_01035 PF02464 Competence-damaged protein AURUGA1_01036 PF01066 CDP-alcohol phosphatidyltransferase AURUGA1_01037 PF01580 FtsK/SpoIIIE family AURUGA1_01037 PF09397 Ftsk gamma domain AURUGA1_01037 PF13491 AURUGA1_01037 AURUGA1_01038 PF00128 Alpha amylase, catalytic domain AURUGA1_01039 PF00251 Glycosyl hydrolases family 32 N-terminal domain AURUGA1_01040 PF00528 Binding-protein-dependent transport system inner membrane component AURUGA1_01041 PF00528 Binding-protein-dependent transport system inner membrane component AURUGA1_01043 PF00356 Bacterial regulatory proteins, lacI family AURUGA1_01043 PF13377 Periplasmic binding protein-like domain AURUGA1_01044 PF00753 Metallo-beta-lactamase superfamily AURUGA1_01044 PF07521 RNA-metabolising metallo-beta-lactamase AURUGA1_01045 PF00701 Dihydrodipicolinate synthetase family AURUGA1_01046 PF02511 Thymidylate synthase complementing protein AURUGA1_01047 PF00085 Thioredoxin AURUGA1_01048 PF14340 AURUGA1_01048 AURUGA1_01049 PF01370 NAD dependent epimerase/dehydratase family AURUGA1_01049 PF08338 Domain of unknown function (DUF1731) AURUGA1_01050 PF02080 TrkA-C domain AURUGA1_01051 PF00999 Sodium/hydrogen exchanger family AURUGA1_01052 PF00589 Phage integrase family AURUGA1_01052 PF02899 Phage integrase, N-terminal SAM-like domain AURUGA1_01053 PF02481 DNA recombination-mediator protein A AURUGA1_01054 PF10611 AURUGA1_01054 AURUGA1_01055 PF01351 Ribonuclease HII AURUGA1_01056 PF00717 Peptidase S24-like AURUGA1_01056 PF10502 Signal peptidase, peptidase S26 AURUGA1_01057 PF01245 Ribosomal protein L19 AURUGA1_01058 PF01746 tRNA (Guanine-1)-methyltransferase AURUGA1_01059 PF01782 RimM N-terminal domain AURUGA1_01060 PF13083 KH domain AURUGA1_01061 PF00886 Ribosomal protein S16 AURUGA1_01062 PF04107 Glutamate-cysteine ligase family 2(GCS2) AURUGA1_01063 PF13230 Glutamine amidotransferases class-II AURUGA1_01064 PF13380 CoA binding domain AURUGA1_01065 PF01053 Cys/Met metabolism PLP-dependent enzyme AURUGA1_01067 PF01641 SelR domain AURUGA1_01068 PF00528 Binding-protein-dependent transport system inner membrane component AURUGA1_01069 PF09084 NMT1/THI5 like AURUGA1_01070 PF00005 ABC transporter AURUGA1_01071 PF00448 SRP54-type protein, GTPase domain AURUGA1_01071 PF02881 SRP54-type protein, helical bundle domain AURUGA1_01071 PF02978 Signal peptide binding domain AURUGA1_01072 PF00448 SRP54-type protein, GTPase domain AURUGA1_01072 PF02881 SRP54-type protein, helical bundle domain AURUGA1_01073 PF01467 Cytidylyltransferase AURUGA1_01074 PF00270 DEAD/DEAH box helicase AURUGA1_01074 PF00271 Helicase conserved C-terminal domain AURUGA1_01074 PF17191 AURUGA1_01074 AURUGA1_01075 PF03602 Conserved hypothetical protein 95 AURUGA1_01076 PF00586 AIR synthase related protein, N-terminal domain AURUGA1_01077 PF12028 AURUGA1_01077 AURUGA1_01078 PF01820 D-ala D-ala ligase N-terminus AURUGA1_01078 PF07478 D-ala D-ala ligase C-terminus AURUGA1_01079 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AURUGA1_01079 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AURUGA1_01080 PF01553 Acyltransferase AURUGA1_01081 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AURUGA1_01082 PF00694 Aconitase C-terminal domain AURUGA1_01083 PF00330 Aconitase family (aconitate hydratase) AURUGA1_01084 PF03741 AURUGA1_01084 AURUGA1_01086 PF00781 Diacylglycerol kinase catalytic domain AURUGA1_01087 PF00230 Major intrinsic protein AURUGA1_01089 PF00749 tRNA synthetases class I (E and Q), catalytic domain AURUGA1_01090 PF01063 Aminotransferase class IV AURUGA1_01091 PF00180 Isocitrate/isopropylmalate dehydrogenase AURUGA1_01092 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AURUGA1_01092 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AURUGA1_01095 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AURUGA1_01095 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AURUGA1_01096 PF10369 Small subunit of acetolactate synthase AURUGA1_01096 PF13710 ACT domain AURUGA1_01097 PF00205 Thiamine pyrophosphate enzyme, central domain AURUGA1_01097 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AURUGA1_01097 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AURUGA1_01098 PF00920 Dehydratase family AURUGA1_01099 PF01261 Xylose isomerase-like TIM barrel AURUGA1_01100 PF01225 Mur ligase family, catalytic domain AURUGA1_01100 PF02875 Mur ligase family, glutamate ligase domain AURUGA1_01100 PF08245 Mur ligase middle domain AURUGA1_01101 PF00472 RF-1 domain AURUGA1_01101 PF03462 PCRF domain AURUGA1_01102 PF07690 Major Facilitator Superfamily AURUGA1_01103 PF03699 AURUGA1_01103 AURUGA1_01104 PF05362 Lon protease (S16) C-terminal proteolytic domain AURUGA1_01104 PF13180 PDZ domain AURUGA1_01105 PF10103 Uncharacterised conserved protein (DUF2342) AURUGA1_01107 PF13245 Part of AAA domain AURUGA1_01107 PF13361 UvrD-like helicase C-terminal domain AURUGA1_01108 PF00293 NUDIX domain AURUGA1_01108 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AURUGA1_01109 PF01636 Phosphotransferase enzyme family AURUGA1_01110 PF00580 UvrD/REP helicase N-terminal domain AURUGA1_01110 PF12705 PD-(D/E)XK nuclease superfamily AURUGA1_01110 PF13361 UvrD-like helicase C-terminal domain AURUGA1_01111 PF12705 PD-(D/E)XK nuclease superfamily AURUGA1_01111 PF13245 Part of AAA domain AURUGA1_01111 PF13361 UvrD-like helicase C-terminal domain AURUGA1_01113 PF00535 Glycosyl transferase family 2 AURUGA1_01114 PF01066 CDP-alcohol phosphatidyltransferase AURUGA1_01115 PF00535 Glycosyl transferase family 2 AURUGA1_01116 PF13180 PDZ domain AURUGA1_01116 PF13365 Trypsin-like peptidase domain AURUGA1_01117 PF08713 DNA alkylation repair enzyme AURUGA1_01120 PF00860 Permease family AURUGA1_01121 PF12146 Putative lysophospholipase AURUGA1_01123 PF00176 SNF2 family N-terminal domain AURUGA1_01123 PF00271 Helicase conserved C-terminal domain AURUGA1_01125 PF00487 AURUGA1_01125 AURUGA1_01126 PF00122 E1-E2 ATPase AURUGA1_01126 PF00403 Heavy-metal-associated domain AURUGA1_01126 PF00702 haloacid dehalogenase-like hydrolase AURUGA1_01128 PF11066 AURUGA1_01128 AURUGA1_01128 PF13460 NADH(P)-binding AURUGA1_01129 PF05901 AURUGA1_01129 AURUGA1_01129 PF07510 AURUGA1_01129 AURUGA1_01131 PF00893 Small Multidrug Resistance protein AURUGA1_01132 PF01614 Bacterial transcriptional regulator AURUGA1_01132 PF09339 IclR helix-turn-helix domain AURUGA1_01133 PF00221 Aromatic amino acid lyase AURUGA1_01134 PF01175 Urocanase AURUGA1_01134 PF17391 AURUGA1_01134 AURUGA1_01134 PF17392 AURUGA1_01134 AURUGA1_01135 PF01979 Amidohydrolase family AURUGA1_01136 PF00491 Arginase family AURUGA1_01137 PF13630 AURUGA1_01137 AURUGA1_01138 PF00753 Metallo-beta-lactamase superfamily AURUGA1_01138 PF07521 RNA-metabolising metallo-beta-lactamase AURUGA1_01138 PF10996 Beta-Casp domain AURUGA1_01140 PF00459 Inositol monophosphatase family AURUGA1_01141 PF09995 AURUGA1_01141 AURUGA1_01142 PF01613 Flavin reductase like domain AURUGA1_01143 PF00255 Glutathione peroxidase AURUGA1_01145 PF00535 Glycosyl transferase family 2 AURUGA1_01146 PF04138 AURUGA1_01146 AURUGA1_01147 PF13231 AURUGA1_01147 AURUGA1_01148 PF02588 AURUGA1_01148 AURUGA1_01149 PF13420 Acetyltransferase (GNAT) domain AURUGA1_01151 PF01668 SmpB protein AURUGA1_01152 PF02687 AURUGA1_01152 AURUGA1_01153 PF00005 ABC transporter AURUGA1_01155 PF01988 AURUGA1_01155 AURUGA1_01157 PF00775 Dioxygenase AURUGA1_01159 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AURUGA1_01159 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AURUGA1_01160 PF01580 FtsK/SpoIIIE family AURUGA1_01162 PF01841 Transglutaminase-like superfamily AURUGA1_01163 PF01882 AURUGA1_01163 AURUGA1_01164 PF07726 ATPase family associated with various cellular activities (AAA) AURUGA1_01166 PF00069 Protein kinase domain AURUGA1_01167 PF13672 Protein phosphatase 2C AURUGA1_01168 PF00498 FHA domain AURUGA1_01169 PF02463 RecF/RecN/SMC N terminal domain AURUGA1_01169 PF06470 SMC proteins Flexible Hinge Domain AURUGA1_01170 PF01614 Bacterial transcriptional regulator AURUGA1_01170 PF09339 IclR helix-turn-helix domain AURUGA1_01171 PF01168 Alanine racemase, N-terminal domain AURUGA1_01171 PF14031 Putative serine dehydratase domain AURUGA1_01172 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AURUGA1_01172 PF06827 Zinc finger found in FPG and IleRS AURUGA1_01172 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AURUGA1_01173 PF00035 Double-stranded RNA binding motif AURUGA1_01173 PF14622 Ribonuclease-III-like AURUGA1_01174 PF01783 Ribosomal L32p protein family AURUGA1_01175 PF02620 AURUGA1_01175 AURUGA1_01177 PF09335 AURUGA1_01177 AURUGA1_01178 PF09335 AURUGA1_01178 AURUGA1_01179 PF02567 Phenazine biosynthesis-like protein AURUGA1_01182 PF07811 AURUGA1_01182 AURUGA1_01184 PF00482 Type II secretion system (T2SS), protein F AURUGA1_01186 PF00437 Type II/IV secretion system protein AURUGA1_01187 PF03883 AURUGA1_01187 AURUGA1_01188 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AURUGA1_01189 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AURUGA1_01189 PF02874 ATP synthase alpha/beta family, beta-barrel domain AURUGA1_01190 PF00231 ATP synthase AURUGA1_01191 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AURUGA1_01191 PF00306 ATP synthase alpha/beta chain, C terminal domain AURUGA1_01191 PF02874 ATP synthase alpha/beta family, beta-barrel domain AURUGA1_01192 PF00213 ATP synthase delta (OSCP) subunit AURUGA1_01193 PF00430 ATP synthase B/B' CF(0) AURUGA1_01194 PF00137 ATP synthase subunit C AURUGA1_01195 PF00119 ATP synthase A chain AURUGA1_01197 PF00953 Glycosyl transferase family 4 AURUGA1_01198 PF01300 Telomere recombination AURUGA1_01199 PF00535 Glycosyl transferase family 2 AURUGA1_01200 PF05175 Methyltransferase small domain AURUGA1_01201 PF00291 Pyridoxal-phosphate dependent enzyme AURUGA1_01202 PF00132 Bacterial transferase hexapeptide (six repeats) AURUGA1_01203 PF00535 Glycosyl transferase family 2 AURUGA1_01205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AURUGA1_01206 PF00472 RF-1 domain AURUGA1_01206 PF03462 PCRF domain AURUGA1_01207 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AURUGA1_01207 PF07497 Rho termination factor, RNA-binding domain AURUGA1_01208 PF13641 Glycosyltransferase like family 2 AURUGA1_01209 PF00288 GHMP kinases N terminal domain AURUGA1_01209 PF08544 GHMP kinases C terminal AURUGA1_01210 PF00291 Pyridoxal-phosphate dependent enzyme AURUGA1_01211 PF00742 Homoserine dehydrogenase AURUGA1_01211 PF01842 ACT domain AURUGA1_01211 PF03447 Homoserine dehydrogenase, NAD binding domain AURUGA1_01212 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AURUGA1_01212 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AURUGA1_01213 PF01370 NAD dependent epimerase/dehydratase family AURUGA1_01214 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AURUGA1_01214 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AURUGA1_01215 PF05050 Methyltransferase FkbM domain AURUGA1_01216 PF00534 Glycosyl transferases group 1 AURUGA1_01217 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AURUGA1_01218 PF00483 Nucleotidyl transferase AURUGA1_01219 PF01757 AURUGA1_01219 AURUGA1_01220 PF01370 NAD dependent epimerase/dehydratase family AURUGA1_01221 PF00535 Glycosyl transferase family 2 AURUGA1_01222 PF00535 Glycosyl transferase family 2 AURUGA1_01224 PF00534 Glycosyl transferases group 1 AURUGA1_01226 PF10066 AURUGA1_01226 AURUGA1_01227 PF00535 Glycosyl transferase family 2 AURUGA1_01228 PF00535 Glycosyl transferase family 2 AURUGA1_01229 PF00534 Glycosyl transferases group 1 AURUGA1_01229 PF13439 Glycosyltransferase Family 4 AURUGA1_01230 PF00535 Glycosyl transferase family 2 AURUGA1_01231 PF09913 AURUGA1_01231 AURUGA1_01232 PF00005 ABC transporter AURUGA1_01233 PF01061 AURUGA1_01233 AURUGA1_01236 PF00750 tRNA synthetases class I (R) AURUGA1_01236 PF03485 Arginyl tRNA synthetase N terminal domain AURUGA1_01236 PF05746 DALR anticodon binding domain AURUGA1_01237 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AURUGA1_01237 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AURUGA1_01238 PF01370 NAD dependent epimerase/dehydratase family AURUGA1_01239 PF01370 NAD dependent epimerase/dehydratase family AURUGA1_01240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AURUGA1_01240 PF00676 Dehydrogenase E1 component AURUGA1_01240 PF02779 Transketolase, pyrimidine binding domain AURUGA1_01240 PF16870 AURUGA1_01240 AURUGA1_01241 PF13490 Putative zinc-finger AURUGA1_01242 PF04542 Sigma-70 region 2 AURUGA1_01242 PF08281 Sigma-70, region 4 AURUGA1_01243 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AURUGA1_01244 PF03193 Protein of unknown function, DUF258 AURUGA1_01245 PF16363 AURUGA1_01245 AURUGA1_01246 PF00578 AhpC/TSA family AURUGA1_01247 PF01381 Helix-turn-helix AURUGA1_01250 PF02467 AURUGA1_01250 AURUGA1_01251 PF13420 Acetyltransferase (GNAT) domain AURUGA1_01252 PF03167 Uracil DNA glycosylase superfamily AURUGA1_01253 PF07885 Ion channel AURUGA1_01254 PF01757 AURUGA1_01254 AURUGA1_01255 PF01053 Cys/Met metabolism PLP-dependent enzyme AURUGA1_01257 PF00378 Enoyl-CoA hydratase/isomerase family AURUGA1_01258 PF00561 alpha/beta hydrolase fold AURUGA1_01259 PF00483 Nucleotidyl transferase AURUGA1_01260 PF09594 AURUGA1_01260 AURUGA1_01261 PF01256 Carbohydrate kinase AURUGA1_01262 PF00571 CBS domain AURUGA1_01262 PF01595 AURUGA1_01262 AURUGA1_01263 PF00571 CBS domain AURUGA1_01263 PF01595 AURUGA1_01263 AURUGA1_01263 PF03471 Transporter associated domain AURUGA1_01264 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURUGA1_01264 PF07568 AURUGA1_01264 AURUGA1_01264 PF08448 PAS fold AURUGA1_01264 PF12282 Signal transduction histidine kinase AURUGA1_01265 PF07859 alpha/beta hydrolase fold AURUGA1_01266 PF01936 NYN domain AURUGA1_01267 PF13614 AAA domain AURUGA1_01268 PF13144 SAF-like AURUGA1_01269 PF12728 Helix-turn-helix domain AURUGA1_01273 PF01043 SecA preprotein cross-linking domain AURUGA1_01273 PF07516 SecA Wing and Scaffold domain AURUGA1_01273 PF07517 SecA DEAD-like domain AURUGA1_01274 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AURUGA1_01275 PF00156 Phosphoribosyl transferase domain AURUGA1_01276 PF10646 AURUGA1_01276 AURUGA1_01276 PF10647 AURUGA1_01276 AURUGA1_01277 PF00512 His Kinase A (phospho-acceptor) domain AURUGA1_01277 PF00672 HAMP domain AURUGA1_01277 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURUGA1_01278 PF00072 Response regulator receiver domain AURUGA1_01278 PF00486 Transcriptional regulatory protein, C terminal AURUGA1_01279 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AURUGA1_01279 PF05221 S-adenosyl-L-homocysteine hydrolase AURUGA1_01280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AURUGA1_01280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AURUGA1_01280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AURUGA1_01280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AURUGA1_01283 PF13641 Glycosyltransferase like family 2 AURUGA1_01284 PF02467 AURUGA1_01284 AURUGA1_01285 PF01238 Phosphomannose isomerase type I AURUGA1_01286 PF04932 AURUGA1_01286 AURUGA1_01288 PF03816 Cell envelope-related transcriptional attenuator domain AURUGA1_01289 PF00731 AIR carboxylase AURUGA1_01290 PF02222 ATP-grasp domain AURUGA1_01291 PF04138 AURUGA1_01291 AURUGA1_01292 PF00535 Glycosyl transferase family 2 AURUGA1_01293 PF03703 AURUGA1_01293 AURUGA1_01294 PF02237 Biotin protein ligase C terminal domain AURUGA1_01294 PF03099 Biotin/lipoate A/B protein ligase family AURUGA1_01295 PF01039 Carboxyl transferase domain AURUGA1_01298 PF05958 tRNA (Uracil-5-)-methyltransferase AURUGA1_01299 PF02545 Maf-like protein AURUGA1_01300 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AURUGA1_01300 PF00364 Biotin-requiring enzyme AURUGA1_01300 PF02785 Biotin carboxylase C-terminal domain AURUGA1_01300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AURUGA1_01301 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AURUGA1_01301 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURUGA1_01302 PF01048 Phosphorylase superfamily AURUGA1_01303 PF00962 Adenosine/AMP deaminase AURUGA1_01304 PF00483 Nucleotidyl transferase AURUGA1_01304 PF01050 Mannose-6-phosphate isomerase AURUGA1_01305 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AURUGA1_01306 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AURUGA1_01307 PF00890 FAD binding domain AURUGA1_01307 PF02910 Fumarate reductase flavoprotein C-term AURUGA1_01308 PF13085 2Fe-2S iron-sulfur cluster binding domain AURUGA1_01308 PF13183 4Fe-4S dicluster domain AURUGA1_01309 PF00391 PEP-utilising enzyme, mobile domain AURUGA1_01309 PF02896 PEP-utilising enzyme, TIM barrel domain AURUGA1_01309 PF05524 PEP-utilising enzyme, N-terminal AURUGA1_01310 PF00455 AURUGA1_01310 AURUGA1_01310 PF08220 DeoR-like helix-turn-helix domain AURUGA1_01311 PF00294 pfkB family carbohydrate kinase AURUGA1_01312 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AURUGA1_01313 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AURUGA1_01314 PF02378 Phosphotransferase system, EIIC AURUGA1_01315 PF00381 PTS HPr component phosphorylation site AURUGA1_01316 PF03631 AURUGA1_01316 AURUGA1_01317 PF03372 Endonuclease/Exonuclease/phosphatase family AURUGA1_01318 PF00579 tRNA synthetases class I (W and Y) AURUGA1_01319 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AURUGA1_01319 PF01872 RibD C-terminal domain AURUGA1_01320 PF00677 Lumazine binding domain AURUGA1_01321 PF00925 GTP cyclohydrolase II AURUGA1_01321 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AURUGA1_01322 PF00885 6,7-dimethyl-8-ribityllumazine synthase AURUGA1_01324 PF00005 ABC transporter AURUGA1_01324 PF00664 ABC transporter transmembrane region AURUGA1_01325 PF00171 Aldehyde dehydrogenase family AURUGA1_01327 PF04234 CopC domain AURUGA1_01328 PF04261 Dyp-type peroxidase family AURUGA1_01329 PF04314 Protein of unknown function (DUF461) AURUGA1_01330 PF03965 Penicillinase repressor AURUGA1_01331 PF01435 Peptidase family M48 AURUGA1_01332 PF00561 alpha/beta hydrolase fold AURUGA1_01333 PF13177 DNA polymerase III, delta subunit AURUGA1_01334 PF02223 Thymidylate kinase AURUGA1_01335 PF01131 DNA topoisomerase AURUGA1_01335 PF01751 Toprim domain AURUGA1_01335 PF13368 AURUGA1_01335 AURUGA1_01338 PF14029 AURUGA1_01338 AURUGA1_01340 PF00437 Type II/IV secretion system protein AURUGA1_01341 PF00501 AMP-binding enzyme AURUGA1_01341 PF13193 AMP-binding enzyme C-terminal domain AURUGA1_01341 PF16177 AURUGA1_01341 AURUGA1_01342 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease AURUGA1_01344 PF00905 Penicillin binding protein transpeptidase domain AURUGA1_01344 PF00912 Transglycosylase AURUGA1_01344 PF03793 PASTA domain AURUGA1_01345 PF00149 Calcineurin-like phosphoesterase AURUGA1_01346 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AURUGA1_01346 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AURUGA1_01346 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AURUGA1_01347 PF00265 Thymidine kinase AURUGA1_01351 PF06039 AURUGA1_01351 AURUGA1_01352 PF01118 Semialdehyde dehydrogenase, NAD binding domain AURUGA1_01352 PF02774 Semialdehyde dehydrogenase, dimerisation domain AURUGA1_01353 PF00696 Amino acid kinase family AURUGA1_01353 PF01842 ACT domain AURUGA1_01353 PF13840 ACT domain AURUGA1_01354 PF02132 RecR protein AURUGA1_01354 PF13662 Toprim domain AURUGA1_01355 PF12169 DNA polymerase III subunits gamma and tau domain III AURUGA1_01355 PF13177 DNA polymerase III, delta subunit AURUGA1_01359 PF07883 Cupin domain AURUGA1_01361 PF12900 Pyridoxamine 5'-phosphate oxidase AURUGA1_01362 PF13564 AURUGA1_01362 AURUGA1_01363 PF14681 Uracil phosphoribosyltransferase AURUGA1_01364 PF00171 Aldehyde dehydrogenase family AURUGA1_01365 PF00171 Aldehyde dehydrogenase family AURUGA1_01366 PF01791 DeoC/LacD family aldolase AURUGA1_01367 PF01048 Phosphorylase superfamily AURUGA1_01368 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AURUGA1_01368 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AURUGA1_01368 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AURUGA1_01368 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AURUGA1_01369 PF00591 Glycosyl transferase family, a/b domain AURUGA1_01369 PF02885 Glycosyl transferase family, helical bundle domain AURUGA1_01369 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AURUGA1_01370 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AURUGA1_01371 PF02653 AURUGA1_01371 AURUGA1_01372 PF02653 AURUGA1_01372 AURUGA1_01373 PF00005 ABC transporter AURUGA1_01374 PF02608 Basic membrane protein AURUGA1_01375 PF00764 Arginosuccinate synthase AURUGA1_01376 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AURUGA1_01377 PF00480 ROK family AURUGA1_01377 PF13412 Winged helix-turn-helix DNA-binding AURUGA1_01378 PF01261 Xylose isomerase-like TIM barrel AURUGA1_01379 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AURUGA1_01379 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AURUGA1_01380 PF13407 Periplasmic binding protein domain AURUGA1_01381 PF00005 ABC transporter AURUGA1_01382 PF02653 AURUGA1_01382 AURUGA1_01383 PF01263 Aldose 1-epimerase AURUGA1_01384 PF01566 AURUGA1_01384 AURUGA1_01385 PF00542 Ribosomal protein L7/L12 C-terminal domain AURUGA1_01385 PF16320 AURUGA1_01385 AURUGA1_01386 PF00466 Ribosomal protein L10 AURUGA1_01387 PF00294 pfkB family carbohydrate kinase AURUGA1_01388 PF00512 His Kinase A (phospho-acceptor) domain AURUGA1_01388 PF00672 HAMP domain AURUGA1_01388 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURUGA1_01389 PF00072 Response regulator receiver domain AURUGA1_01389 PF00486 Transcriptional regulatory protein, C terminal AURUGA1_01390 PF09588 YqaJ-like viral recombinase domain AURUGA1_01391 PF13302 Acetyltransferase (GNAT) domain AURUGA1_01392 PF00155 Aminotransferase class I and II AURUGA1_01393 PF00687 Ribosomal protein L1p/L10e family AURUGA1_01394 PF00298 Ribosomal protein L11, RNA binding domain AURUGA1_01394 PF03946 Ribosomal protein L11, N-terminal domain AURUGA1_01395 PF02357 Transcription termination factor nusG AURUGA1_01396 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AURUGA1_01398 PF00155 Aminotransferase class I and II AURUGA1_01399 PF08818 Domain of unknown function (DU1801) AURUGA1_01400 PF01565 FAD binding domain AURUGA1_01400 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AURUGA1_01401 PF01575 MaoC like domain AURUGA1_01402 PF13452 N-terminal half of MaoC dehydratase AURUGA1_01403 PF00282 Pyridoxal-dependent decarboxylase conserved domain AURUGA1_01404 PF04371 Porphyromonas-type peptidyl-arginine deiminase AURUGA1_01406 PF00107 Zinc-binding dehydrogenase AURUGA1_01406 PF08240 Alcohol dehydrogenase GroES-like domain AURUGA1_01407 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURUGA1_01408 PF13459 4Fe-4S single cluster domain AURUGA1_01409 PF01557 Fumarylacetoacetate (FAA) hydrolase family AURUGA1_01410 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AURUGA1_01411 PF00171 Aldehyde dehydrogenase family AURUGA1_01412 PF07722 Peptidase C26 AURUGA1_01413 PF01047 MarR family AURUGA1_01414 PF00067 Cytochrome P450 AURUGA1_01415 PF00117 Glutamine amidotransferase class-I AURUGA1_01416 PF00120 Glutamine synthetase, catalytic domain AURUGA1_01417 PF06314 Acetoacetate decarboxylase (ADC) AURUGA1_01418 PF13520 Amino acid permease AURUGA1_01419 PF00171 Aldehyde dehydrogenase family AURUGA1_01420 PF00107 Zinc-binding dehydrogenase AURUGA1_01420 PF08240 Alcohol dehydrogenase GroES-like domain AURUGA1_01421 PF00120 Glutamine synthetase, catalytic domain AURUGA1_01422 PF00117 Glutamine amidotransferase class-I AURUGA1_01423 PF00171 Aldehyde dehydrogenase family AURUGA1_01424 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AURUGA1_01424 PF02770 Acyl-CoA dehydrogenase, middle domain AURUGA1_01424 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AURUGA1_01425 PF00392 Bacterial regulatory proteins, gntR family AURUGA1_01425 PF07729 FCD domain AURUGA1_01426 PF01012 Electron transfer flavoprotein domain AURUGA1_01427 PF00766 Electron transfer flavoprotein FAD-binding domain AURUGA1_01427 PF01012 Electron transfer flavoprotein domain AURUGA1_01428 PF01292 Prokaryotic cytochrome b561 AURUGA1_01429 PF02515 CoA-transferase family III AURUGA1_01430 PF03328 HpcH/HpaI aldolase/citrate lyase family AURUGA1_01431 PF01575 MaoC like domain AURUGA1_01432 PF00583 Acetyltransferase (GNAT) family AURUGA1_01433 PF02274 Amidinotransferase AURUGA1_01434 PF01808 AICARFT/IMPCHase bienzyme AURUGA1_01434 PF02142 MGS-like domain AURUGA1_01435 PF00551 Formyl transferase AURUGA1_01438 PF00549 CoA-ligase AURUGA1_01438 PF02629 CoA binding domain AURUGA1_01439 PF00549 CoA-ligase AURUGA1_01439 PF08442 ATP-grasp domain AURUGA1_01440 PF01988 AURUGA1_01440 AURUGA1_01441 PF00580 UvrD/REP helicase N-terminal domain AURUGA1_01441 PF13361 UvrD-like helicase C-terminal domain AURUGA1_01442 PF03009 Glycerophosphoryl diester phosphodiesterase family AURUGA1_01443 PF12811 AURUGA1_01443 AURUGA1_01444 PF12802 MarR family AURUGA1_01445 PF03741 AURUGA1_01445 AURUGA1_01446 PF05982 AURUGA1_01446 AURUGA1_01447 PF01699 Sodium/calcium exchanger protein AURUGA1_01451 PF00128 Alpha amylase, catalytic domain AURUGA1_01452 PF01551 Peptidase family M23 AURUGA1_01453 PF00459 Inositol monophosphatase family AURUGA1_01454 PF01869 BadF/BadG/BcrA/BcrD ATPase family AURUGA1_01456 PF03971 Monomeric isocitrate dehydrogenase AURUGA1_01457 PF03176 MMPL family AURUGA1_01458 PF01047 MarR family AURUGA1_01461 PF04461 Protein of unknown function (DUF520) AURUGA1_01462 PF00135 Carboxylesterase family AURUGA1_01463 PF12146 Putative lysophospholipase AURUGA1_01464 PF00202 Aminotransferase class-III AURUGA1_01465 PF00202 Aminotransferase class-III AURUGA1_01466 PF00005 ABC transporter AURUGA1_01467 PF00528 Binding-protein-dependent transport system inner membrane component AURUGA1_01468 PF00528 Binding-protein-dependent transport system inner membrane component AURUGA1_01469 PF12849 PBP superfamily domain AURUGA1_01470 PF01895 PhoU domain AURUGA1_01471 PF00512 His Kinase A (phospho-acceptor) domain AURUGA1_01471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AURUGA1_01472 PF00072 Response regulator receiver domain AURUGA1_01472 PF00486 Transcriptional regulatory protein, C terminal AURUGA1_01473 PF01022 Bacterial regulatory protein, arsR family AURUGA1_01474 PF00230 Major intrinsic protein AURUGA1_01475 PF01451 Low molecular weight phosphotyrosine protein phosphatase AURUGA1_01476 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURUGA1_01477 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AURUGA1_01477 PF02843 Phosphoribosylglycinamide synthetase, C domain AURUGA1_01477 PF02844 Phosphoribosylglycinamide synthetase, N domain AURUGA1_01478 PF01259 SAICAR synthetase AURUGA1_01481 PF03713 Domain of unknown function (DUF305) AURUGA1_01482 PF00403 Heavy-metal-associated domain AURUGA1_01483 PF13472 GDSL-like Lipase/Acylhydrolase family AURUGA1_01484 PF00534 Glycosyl transferases group 1 AURUGA1_01484 PF13439 Glycosyltransferase Family 4 AURUGA1_01485 PF09335 AURUGA1_01485 AURUGA1_01486 PF00483 Nucleotidyl transferase AURUGA1_01488 PF00132 Bacterial transferase hexapeptide (six repeats) AURUGA1_01488 PF00501 AMP-binding enzyme AURUGA1_01488 PF00550 Phosphopantetheine attachment site AURUGA1_01489 PF01433 Peptidase family M1 AURUGA1_01491 PF00128 Alpha amylase, catalytic domain AURUGA1_01491 PF11941 Domain of unknown function (DUF3459) AURUGA1_01492 PF03301 Tryptophan 2,3-dioxygenase AURUGA1_01494 PF00266 Aminotransferase class-V AURUGA1_01495 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AURUGA1_01496 PF13507 CobB/CobQ-like glutamine amidotransferase domain AURUGA1_01497 PF12823 AURUGA1_01497 AURUGA1_01498 PF00586 AIR synthase related protein, N-terminal domain AURUGA1_01498 PF02769 AIR synthase related protein, C-terminal domain AURUGA1_01499 PF00248 Aldo/keto reductase family AURUGA1_01501 PF04213 AURUGA1_01501 AURUGA1_01502 PF01817 Chorismate mutase type II AURUGA1_01503 PF00892 EamA-like transporter family AURUGA1_01506 PF00709 Adenylosuccinate synthetase AURUGA1_01507 PF13649 Methyltransferase domain AURUGA1_01508 PF13520 Amino acid permease AURUGA1_01509 PF00588 SpoU rRNA Methylase family AURUGA1_01510 PF00156 Phosphoribosyl transferase domain AURUGA1_01511 PF00892 EamA-like transporter family AURUGA1_01512 PF00873 AcrB/AcrD/AcrF family AURUGA1_01513 PF13520 Amino acid permease AURUGA1_01514 PF02537 AURUGA1_01514 AURUGA1_01515 PF02537 AURUGA1_01515 AURUGA1_01516 PF11273 AURUGA1_01516 AURUGA1_01517 PF01925 AURUGA1_01517 AURUGA1_01518 PF00586 AIR synthase related protein, N-terminal domain AURUGA1_01518 PF02769 AIR synthase related protein, C-terminal domain AURUGA1_01519 PF00156 Phosphoribosyl transferase domain AURUGA1_01519 PF13522 Glutamine amidotransferase domain AURUGA1_01522 PF00348 Polyprenyl synthetase AURUGA1_01523 PF01209 ubiE/COQ5 methyltransferase family AURUGA1_01524 PF00425 chorismate binding enzyme AURUGA1_01525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AURUGA1_01525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AURUGA1_01526 PF13396 AURUGA1_01526 AURUGA1_01527 PF14012 AURUGA1_01527 AURUGA1_01528 PF01040 UbiA prenyltransferase family AURUGA1_01529 PF00501 AMP-binding enzyme AURUGA1_01529 PF13193 AMP-binding enzyme C-terminal domain AURUGA1_01530 PF00378 Enoyl-CoA hydratase/isomerase family AURUGA1_01531 PF13378 Enolase C-terminal domain-like AURUGA1_01532 PF01578 AURUGA1_01532 AURUGA1_01533 PF05140 AURUGA1_01533 AURUGA1_01534 PF02683 AURUGA1_01534 AURUGA1_01535 PF00578 AhpC/TSA family AURUGA1_01536 PF00300 Histidine phosphatase superfamily (branch 1) AURUGA1_01537 PF00152 tRNA synthetases class II (D, K and N) AURUGA1_01537 PF01336 OB-fold nucleic acid binding domain AURUGA1_01538 PF00462 Glutaredoxin AURUGA1_01539 PF09851 AURUGA1_01539 AURUGA1_01539 PF13396 AURUGA1_01539 AURUGA1_01540 PF07876 Stress responsive A/B Barrel Domain AURUGA1_01541 PF05768 Glutaredoxin-like domain (DUF836) AURUGA1_01542 PF01022 Bacterial regulatory protein, arsR family AURUGA1_01543 PF02386 Cation transport protein AURUGA1_01544 PF02080 TrkA-C domain AURUGA1_01544 PF02254 TrkA-N domain AURUGA1_01545 PF03807 NADP oxidoreductase coenzyme F420-dependent AURUGA1_01545 PF14748 Pyrroline-5-carboxylate reductase dimerisation AURUGA1_01546 PF01545 Cation efflux family AURUGA1_01547 PF14437 AURUGA1_01547 AURUGA1_01548 PF00486 Transcriptional regulatory protein, C terminal AURUGA1_01549 PF00875 DNA photolyase AURUGA1_01549 PF03441 FAD binding domain of DNA photolyase AURUGA1_01550 PF00581 Rhodanese-like domain AURUGA1_01551 PF01841 Transglutaminase-like superfamily AURUGA1_01551 PF08379 AURUGA1_01551 AURUGA1_01552 PF04168 AURUGA1_01552 AURUGA1_01553 PF14403 AURUGA1_01553 AURUGA1_01554 PF07081 Protein of unknown function (DUF1349) AURUGA1_01555 PF03583 Secretory lipase AURUGA1_01557 PF03551 Transcriptional regulator PadR-like family AURUGA1_01558 PF03109 AURUGA1_01558 AURUGA1_01559 PF04250 AURUGA1_01559 AURUGA1_01560 PF13520 Amino acid permease AURUGA1_01561 PF01593 Flavin containing amine oxidoreductase AURUGA1_01562 PF01300 Telomere recombination AURUGA1_01562 PF03481 Putative GTP-binding controlling metal-binding AURUGA1_01564 PF00144 Beta-lactamase AURUGA1_01566 PF03372 Endonuclease/Exonuclease/phosphatase family AURUGA1_01569 PF00106 short chain dehydrogenase AURUGA1_01571 PF01212 Beta-eliminating lyase AURUGA1_01573 PF00881 Nitroreductase family AURUGA1_01574 PF13561 Enoyl-(Acyl carrier protein) reductase AURUGA1_01575 PF00004 ATPase family associated with various cellular activities (AAA) AURUGA1_01575 PF07724 AAA domain (Cdc48 subfamily) AURUGA1_01575 PF10431 C-terminal, D2-small domain, of ClpB protein AURUGA1_01576 PF13620 Carboxypeptidase regulatory-like domain AURUGA1_01577 PF05175 Methyltransferase small domain AURUGA1_01578 PF12893 Putative lumazine-binding AURUGA1_01580 PF13411 MerR HTH family regulatory protein AURUGA1_01581 PF00226 DnaJ domain AURUGA1_01581 PF01556 DnaJ C terminal domain AURUGA1_01582 PF01025 GrpE AURUGA1_01583 PF00012 Hsp70 protein AURUGA1_01584 PF11700 AURUGA1_01584 AURUGA1_01585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AURUGA1_01586 PF01040 UbiA prenyltransferase family AURUGA1_01589 PF01593 Flavin containing amine oxidoreductase AURUGA1_01590 PF00494 Squalene/phytoene synthase AURUGA1_01591 PF00348 Polyprenyl synthetase AURUGA1_01592 PF00293 NUDIX domain AURUGA1_01593 PF00196 Bacterial regulatory proteins, luxR family AURUGA1_01594 PF00440 Bacterial regulatory proteins, tetR family AURUGA1_01595 PF00692 dUTPase AURUGA1_01598 PF00772 DnaB-like helicase N terminal domain AURUGA1_01598 PF03796 DnaB-like helicase C terminal domain AURUGA1_01599 PF01281 Ribosomal protein L9, N-terminal domain AURUGA1_01599 PF03948 Ribosomal protein L9, C-terminal domain AURUGA1_01600 PF01084 Ribosomal protein S18 AURUGA1_01601 PF00436 Single-strand binding protein family AURUGA1_01602 PF01250 Ribosomal protein S6 AURUGA1_01603 PF01743 Poly A polymerase head domain AURUGA1_01603 PF01966 HD domain AURUGA1_01603 PF12627 Probable RNA and SrmB- binding site of polymerase A AURUGA1_01605 PF03023 AURUGA1_01605 AURUGA1_01606 PF07992 Pyridine nucleotide-disulphide oxidoreductase AURUGA1_01607 PF00085 Thioredoxin AURUGA1_01608 PF00155 Aminotransferase class I and II AURUGA1_01609 PF01820 D-ala D-ala ligase N-terminus AURUGA1_01609 PF07478 D-ala D-ala ligase C-terminus AURUGA1_01610 PF02195 ParB-like nuclease domain AURUGA1_01611 PF13614 AAA domain AURUGA1_01612 PF02527 rRNA small subunit methyltransferase G AURUGA1_01613 PF01424 R3H domain AURUGA1_01614 PF02096 60Kd inner membrane protein AURUGA1_01615 PF01809 AURUGA1_01615 AURUGA1_01616 PF00825 Ribonuclease P AURUGA1_01617 PF00468 Ribosomal protein L34