locus-tag class description Q31a_00010 PF00308 Bacterial dnaA protein Q31a_00010 PF08299 Bacterial dnaA protein helix-turn-helix Q31a_00010 PF11638 DnaA N-terminal domain Q31a_00030 PF02767 DNA polymerase III beta subunit, central domain Q31a_00030 PF02768 DNA polymerase III beta subunit, C-terminal domain Q31a_00030 PF00712 DNA polymerase III beta subunit, N-terminal domain Q31a_00090 PF12704 MacB-like periplasmic core domain Q31a_00090 PF02687 FtsX-like permease family Q31a_00100 PF00005 ABC transporter Q31a_00140 PF04408 Helicase associated domain (HA2) Q31a_00140 PF11898 Domain of unknown function (DUF3418) Q31a_00140 PF00270 DEAD/DEAH box helicase Q31a_00140 PF00271 Helicase conserved C-terminal domain Q31a_00140 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Q31a_00200 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Q31a_00200 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Q31a_00220 PF00069 Protein kinase domain Q31a_00240 PF00069 Protein kinase domain Q31a_00260 PF00899 ThiF family Q31a_00270 PF13180 PDZ domain Q31a_00280 PF00072 Response regulator receiver domain Q31a_00280 PF00486 Transcriptional regulatory protein, C terminal Q31a_00290 PF00464 Serine hydroxymethyltransferase Q31a_00300 PF00924 Mechanosensitive ion channel Q31a_00300 PF05552 Conserved TM helix Q31a_00310 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Q31a_00320 PF02599 Global regulator protein family Q31a_00370 PF01208 Uroporphyrinogen decarboxylase (URO-D) Q31a_00400 PF03462 PCRF domain Q31a_00400 PF00472 RF-1 domain Q31a_00430 PF01648 4'-phosphopantetheinyl transferase superfamily Q31a_00440 PF01960 ArgJ family Q31a_00450 PF02774 Semialdehyde dehydrogenase, dimerisation domain Q31a_00450 PF01118 Semialdehyde dehydrogenase, NAD binding domain Q31a_00510 PF04542 Sigma-70 region 2 Q31a_00510 PF04545 Sigma-70, region 4 Q31a_00540 PF00069 Protein kinase domain Q31a_00540 PF03793 PASTA domain Q31a_00560 PF01501 Glycosyl transferase family 8 Q31a_00560 PF00535 Glycosyl transferase family 2 Q31a_00570 PF01494 FAD binding domain Q31a_00610 PF00403 Heavy-metal-associated domain Q31a_00640 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Q31a_00640 PF12801 4Fe-4S binding domain Q31a_00640 PF13746 4Fe-4S dicluster domain Q31a_00650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Q31a_00650 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Q31a_00670 PF00115 Cytochrome C and Quinol oxidase polypeptide I Q31a_00690 PF00884 Sulfatase Q31a_00690 PF16385 Domain of unknown function Q31a_00750 PF01145 SPFH domain / Band 7 family Q31a_00760 PF01145 SPFH domain / Band 7 family Q31a_00790 PF02565 Recombination protein O C terminal Q31a_00790 PF11967 Recombination protein O N terminal Q31a_00800 PF00486 Transcriptional regulatory protein, C terminal Q31a_00800 PF00072 Response regulator receiver domain Q31a_00810 PF00994 Probable molybdopterin binding domain Q31a_00820 PF00176 SNF2 family N-terminal domain Q31a_00820 PF12419 SNF2 Helicase protein Q31a_00820 PF00271 Helicase conserved C-terminal domain Q31a_00830 PF17757 UvrB interaction domain Q31a_00830 PF02559 CarD-like/TRCF domain Q31a_00830 PF00270 DEAD/DEAH box helicase Q31a_00830 PF00271 Helicase conserved C-terminal domain Q31a_00830 PF03461 TRCF domain Q31a_00850 PF00472 RF-1 domain Q31a_00920 PF00012 Hsp70 protein Q31a_00930 PF00012 Hsp70 protein Q31a_01000 PF01168 Alanine racemase, N-terminal domain Q31a_01030 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Q31a_01030 PF05221 S-adenosyl-L-homocysteine hydrolase Q31a_01040 PF13180 PDZ domain Q31a_01070 PF02321 Outer membrane efflux protein Q31a_01090 PF00873 AcrB/AcrD/AcrF family Q31a_01100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Q31a_01120 PF01625 Peptide methionine sulfoxide reductase Q31a_01140 PF00999 Sodium/hydrogen exchanger family Q31a_01150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Q31a_01150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Q31a_01170 PF02082 Transcriptional regulator Q31a_01190 PF17863 AAA lid domain Q31a_01190 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_01240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Q31a_01240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Q31a_01250 PF00085 Thioredoxin Q31a_01280 PF01138 3' exoribonuclease family, domain 1 Q31a_01280 PF03725 3' exoribonuclease family, domain 2 Q31a_01300 PF04298 Putative neutral zinc metallopeptidase Q31a_01310 PF04542 Sigma-70 region 2 Q31a_01310 PF08281 Sigma-70, region 4 Q31a_01330 PF00069 Protein kinase domain Q31a_01330 PF03793 PASTA domain Q31a_01390 PF00300 Histidine phosphatase superfamily (branch 1) Q31a_01410 PF02447 GntP family permease Q31a_01430 PF00206 Lyase Q31a_01430 PF10415 Fumarase C C-terminus Q31a_01440 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Q31a_01490 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Q31a_01490 PF16347 Domain of unknown function (DUF4976) Q31a_01490 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain Q31a_01490 PF00884 Sulfatase Q31a_01490 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain Q31a_01510 PF00069 Protein kinase domain Q31a_01510 PF03793 PASTA domain Q31a_01520 PF04542 Sigma-70 region 2 Q31a_01520 PF04545 Sigma-70, region 4 Q31a_01530 PF01557 Fumarylacetoacetate (FAA) hydrolase family Q31a_01540 PF04055 Radical SAM superfamily Q31a_01540 PF06968 Biotin and Thiamin Synthesis associated domain Q31a_01580 PF17191 RecG wedge domain Q31a_01580 PF00271 Helicase conserved C-terminal domain Q31a_01580 PF00270 DEAD/DEAH box helicase Q31a_01590 PF00893 Small Multidrug Resistance protein Q31a_01630 PF01699 Sodium/calcium exchanger protein Q31a_01660 PF00884 Sulfatase Q31a_01700 PF00535 Glycosyl transferase family 2 Q31a_01710 PF02080 TrkA-C domain Q31a_01710 PF00999 Sodium/hydrogen exchanger family Q31a_01710 PF03471 Transporter associated domain Q31a_01790 PF13545 Crp-like helix-turn-helix domain Q31a_01790 PF00027 Cyclic nucleotide-binding domain Q31a_01820 PF13472 GDSL-like Lipase/Acylhydrolase family Q31a_01840 PF16347 Domain of unknown function (DUF4976) Q31a_01840 PF00884 Sulfatase Q31a_01850 PF00884 Sulfatase Q31a_01850 PF16385 Domain of unknown function Q31a_01920 PF13472 GDSL-like Lipase/Acylhydrolase family Q31a_01920 PF07859 alpha/beta hydrolase fold Q31a_02010 PF00873 AcrB/AcrD/AcrF family Q31a_02060 PF00072 Response regulator receiver domain Q31a_02060 PF02954 Bacterial regulatory protein, Fis family Q31a_02060 PF00158 Sigma-54 interaction domain Q31a_02070 PF00075 RNase H Q31a_02080 PF01053 Cys/Met metabolism PLP-dependent enzyme Q31a_02090 PF01053 Cys/Met metabolism PLP-dependent enzyme Q31a_02190 PF01704 UTP--glucose-1-phosphate uridylyltransferase Q31a_02210 PF03449 Transcription elongation factor, N-terminal Q31a_02210 PF01272 Transcription elongation factor, GreA/GreB, C-term Q31a_02230 PF16697 Inner membrane component of T3SS, cytoplasmic domain Q31a_02240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_02250 PF01329 Pterin 4 alpha carbinolamine dehydratase Q31a_02260 PF01593 Flavin containing amine oxidoreductase Q31a_02280 PF04107 Glutamate-cysteine ligase family 2(GCS2) Q31a_02290 PF08443 RimK-like ATP-grasp domain Q31a_02290 PF18030 RimK PreATP-grasp domain Q31a_02290 PF02080 TrkA-C domain Q31a_02340 PF10396 GTP-binding protein TrmE N-terminus Q31a_02340 PF12631 MnmE helical domain Q31a_02340 PF01926 50S ribosome-binding GTPase Q31a_02370 PF02773 S-adenosylmethionine synthetase, C-terminal domain Q31a_02370 PF02772 S-adenosylmethionine synthetase, central domain Q31a_02370 PF00438 S-adenosylmethionine synthetase, N-terminal domain Q31a_02380 PF01297 Zinc-uptake complex component A periplasmic Q31a_02390 PF00005 ABC transporter Q31a_02400 PF00950 ABC 3 transport family Q31a_02410 PF00282 Pyridoxal-dependent decarboxylase conserved domain Q31a_02450 PF00152 tRNA synthetases class II (D, K and N) Q31a_02500 PF13538 UvrD-like helicase C-terminal domain Q31a_02530 PF01554 MatE Q31a_02540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Q31a_02550 PF00069 Protein kinase domain Q31a_02550 PF03793 PASTA domain Q31a_02570 PF00535 Glycosyl transferase family 2 Q31a_02590 PF00056 lactate/malate dehydrogenase, NAD binding domain Q31a_02590 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Q31a_02640 PF00171 Aldehyde dehydrogenase family Q31a_02650 PF03319 Ethanolamine utilisation protein EutN/carboxysome Q31a_02660 PF00871 Acetokinase family Q31a_02670 PF00936 BMC domain Q31a_02680 PF00936 BMC domain Q31a_02690 PF06130 Phosphate propanoyltransferase Q31a_02700 PF00455 DeoR C terminal sensor domain Q31a_02700 PF08220 DeoR-like helix-turn-helix domain Q31a_02730 PF00884 Sulfatase Q31a_02730 PF16385 Domain of unknown function Q31a_02780 PF11798 IMS family HHH motif Q31a_02780 PF11799 impB/mucB/samB family C-terminal domain Q31a_02780 PF00817 impB/mucB/samB family Q31a_02790 PF00140 Sigma-70 factor, region 1.2 Q31a_02790 PF03979 Sigma-70 factor, region 1.1 Q31a_02790 PF04545 Sigma-70, region 4 Q31a_02790 PF04539 Sigma-70 region 3 Q31a_02790 PF04542 Sigma-70 region 2 Q31a_02870 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_02870 PF17863 AAA lid domain Q31a_02890 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family Q31a_02910 PF01435 Peptidase family M48 Q31a_02920 PF04011 LemA family Q31a_02930 PF13472 GDSL-like Lipase/Acylhydrolase family Q31a_02940 PF00884 Sulfatase Q31a_02970 PF02569 Pantoate-beta-alanine ligase Q31a_03030 PF01545 Cation efflux family Q31a_03030 PF16916 Dimerisation domain of Zinc Transporter Q31a_03040 PF00990 Diguanylate cyclase, GGDEF domain Q31a_03040 PF17151 Periplasmic sensor domain Q31a_03050 PF00072 Response regulator receiver domain Q31a_03060 PF01627 Hpt domain Q31a_03060 PF00072 Response regulator receiver domain Q31a_03060 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Q31a_03060 PF00672 HAMP domain Q31a_03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_03060 PF00512 His Kinase A (phospho-acceptor) domain Q31a_03080 PF00593 TonB dependent receptor Q31a_03080 PF07715 TonB-dependent Receptor Plug Domain Q31a_03100 PF02911 Formyl transferase, C-terminal domain Q31a_03100 PF00551 Formyl transferase Q31a_03110 PF00133 tRNA synthetases class I (I, L, M and V) Q31a_03110 PF08264 Anticodon-binding domain of tRNA Q31a_03200 PF00535 Glycosyl transferase family 2 Q31a_03210 PF01841 Transglutaminase-like superfamily Q31a_03250 PF01565 FAD binding domain Q31a_03330 PF01470 Pyroglutamyl peptidase Q31a_03350 PF02896 PEP-utilising enzyme, TIM barrel domain Q31a_03350 PF00391 PEP-utilising enzyme, mobile domain Q31a_03350 PF05524 PEP-utilising enzyme, N-terminal Q31a_03370 PF00884 Sulfatase Q31a_03380 PF03989 DNA gyrase C-terminal domain, beta-propeller Q31a_03380 PF00521 DNA gyrase/topoisomerase IV, subunit A Q31a_03440 PF02254 TrkA-N domain Q31a_03440 PF02080 TrkA-C domain Q31a_03450 PF02386 Cation transport protein Q31a_03530 PF08241 Methyltransferase domain Q31a_03640 PF10459 Peptidase S46 Q31a_03650 PF00291 Pyridoxal-phosphate dependent enzyme Q31a_03670 PF01053 Cys/Met metabolism PLP-dependent enzyme Q31a_03680 PF07021 Methionine biosynthesis protein MetW Q31a_03680 PF00561 alpha/beta hydrolase fold Q31a_03750 PF00795 Carbon-nitrogen hydrolase Q31a_03760 PF00005 ABC transporter Q31a_03760 PF12704 MacB-like periplasmic core domain Q31a_03760 PF02687 FtsX-like permease family Q31a_03770 PF00005 ABC transporter Q31a_03870 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Q31a_03880 PF03129 Anticodon binding domain Q31a_03880 PF02824 TGS domain Q31a_03880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Q31a_03880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Q31a_03890 PF01207 Dihydrouridine synthase (Dus) Q31a_03900 PF00884 Sulfatase Q31a_03910 PF00586 AIR synthase related protein, N-terminal domain Q31a_03910 PF02769 AIR synthase related protein, C-terminal domain Q31a_03920 PF06969 HemN C-terminal domain Q31a_03920 PF04055 Radical SAM superfamily Q31a_03930 PF01152 Bacterial-like globin Q31a_03940 PF00909 Ammonium Transporter Family Q31a_03950 PF08713 DNA alkylation repair enzyme Q31a_03980 PF14870 Photosynthesis system II assembly factor YCF48 Q31a_03990 PF18030 RimK PreATP-grasp domain Q31a_03990 PF02080 TrkA-C domain Q31a_03990 PF08443 RimK-like ATP-grasp domain Q31a_04010 PF14403 Circularly permuted ATP-grasp type 2 Q31a_04020 PF14403 Circularly permuted ATP-grasp type 2 Q31a_04020 PF04168 A predicted alpha-helical domain with a conserved ER motif. Q31a_04050 PF04168 A predicted alpha-helical domain with a conserved ER motif. Q31a_04050 PF14403 Circularly permuted ATP-grasp type 2 Q31a_04060 PF08379 Bacterial transglutaminase-like N-terminal region Q31a_04060 PF01841 Transglutaminase-like superfamily Q31a_04090 PF01368 DHH family Q31a_04090 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Q31a_04090 PF17768 RecJ OB domain Q31a_04090 PF02272 DHHA1 domain Q31a_04130 PF03793 PASTA domain Q31a_04130 PF00069 Protein kinase domain Q31a_04170 PF00571 CBS domain Q31a_04170 PF01380 SIS domain Q31a_04220 PF00437 Type II/IV secretion system protein Q31a_04240 PF01979 Amidohydrolase family Q31a_04290 PF01761 3-dehydroquinate synthase Q31a_04310 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Q31a_04310 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Q31a_04320 PF05175 Methyltransferase small domain Q31a_04320 PF17827 PrmC N-terminal domain Q31a_04340 PF02481 DNA recombination-mediator protein A Q31a_04340 PF17782 DprA winged helix domain Q31a_04350 PF06733 DEAD_2 Q31a_04350 PF13307 Helicase C-terminal domain Q31a_04360 PF03352 Methyladenine glycosylase Q31a_04370 PF03793 PASTA domain Q31a_04370 PF00069 Protein kinase domain Q31a_04390 PF07859 alpha/beta hydrolase fold Q31a_04390 PF13472 GDSL-like Lipase/Acylhydrolase family Q31a_04420 PF01040 UbiA prenyltransferase family Q31a_04430 PF00986 DNA gyrase B subunit, carboxyl terminus Q31a_04430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_04430 PF01751 Toprim domain Q31a_04430 PF00204 DNA gyrase B Q31a_04440 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region Q31a_04440 PF00326 Prolyl oligopeptidase family Q31a_04490 PF07969 Amidohydrolase family Q31a_04500 PF02741 FTR, proximal lobe Q31a_04500 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase Q31a_04540 PF01209 ubiE/COQ5 methyltransferase family Q31a_04580 PF16177 Acetyl-coenzyme A synthetase N-terminus Q31a_04580 PF13193 AMP-binding enzyme C-terminal domain Q31a_04580 PF00501 AMP-binding enzyme Q31a_04590 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Q31a_04620 PF00425 chorismate binding enzyme Q31a_04620 PF04715 Anthranilate synthase component I, N terminal region Q31a_04640 PF03793 PASTA domain Q31a_04640 PF00069 Protein kinase domain Q31a_04700 PF03793 PASTA domain Q31a_04700 PF00069 Protein kinase domain Q31a_04710 PF01327 Polypeptide deformylase Q31a_04720 PF00762 Ferrochelatase Q31a_04750 PF04371 Porphyromonas-type peptidyl-arginine deiminase Q31a_04800 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus Q31a_04800 PF01048 Phosphorylase superfamily Q31a_04810 PF00005 ABC transporter Q31a_04830 PF01894 Uncharacterised protein family UPF0047 Q31a_04840 PF04055 Radical SAM superfamily Q31a_05110 PF13180 PDZ domain Q31a_05330 PF00578 AhpC/TSA family Q31a_05410 PF04986 Putative transposase Q31a_05410 PF14319 Transposase zinc-binding domain Q31a_05480 PF01548 Transposase Q31a_05480 PF02371 Transposase IS116/IS110/IS902 family Q31a_05510 PF13495 Phage integrase, N-terminal SAM-like domain Q31a_05510 PF00589 Phage integrase family Q31a_05520 PF13495 Phage integrase, N-terminal SAM-like domain Q31a_05520 PF00589 Phage integrase family Q31a_05540 PF00289 Biotin carboxylase, N-terminal domain Q31a_05540 PF02785 Biotin carboxylase C-terminal domain Q31a_05540 PF00364 Biotin-requiring enzyme Q31a_05540 PF02436 Conserved carboxylase domain Q31a_05540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Q31a_05540 PF00682 HMGL-like Q31a_05550 PF00009 Elongation factor Tu GTP binding domain Q31a_05560 PF01507 Phosphoadenosine phosphosulfate reductase family Q31a_05570 PF02527 rRNA small subunit methyltransferase G Q31a_05600 PF02683 Cytochrome C biogenesis protein transmembrane region Q31a_05600 PF11412 Disulphide bond corrector protein DsbC Q31a_05610 PF05175 Methyltransferase small domain Q31a_05640 PF07992 Pyridine nucleotide-disulphide oxidoreductase Q31a_05640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Q31a_05660 PF02801 Beta-ketoacyl synthase, C-terminal domain Q31a_05660 PF00109 Beta-ketoacyl synthase, N-terminal domain Q31a_05710 PF13537 Glutamine amidotransferase domain Q31a_05710 PF00733 Asparagine synthase Q31a_05720 PF00483 Nucleotidyl transferase Q31a_05730 PF00990 Diguanylate cyclase, GGDEF domain Q31a_05770 PF03572 Peptidase family S41 Q31a_05770 PF13180 PDZ domain Q31a_05790 PF00291 Pyridoxal-phosphate dependent enzyme Q31a_05790 PF00585 C-terminal regulatory domain of Threonine dehydratase Q31a_05830 PF00510 Cytochrome c oxidase subunit III Q31a_05840 PF00510 Cytochrome c oxidase subunit III Q31a_05840 PF00115 Cytochrome C and Quinol oxidase polypeptide I Q31a_05850 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Q31a_05910 PF00037 4Fe-4S binding domain Q31a_05910 PF13247 4Fe-4S dicluster domain Q31a_05930 PF01966 HD domain Q31a_05930 PF11871 Domain of unknown function (DUF3391) Q31a_05970 PF01261 Xylose isomerase-like TIM barrel Q31a_05980 PF16124 RecQ zinc-binding Q31a_05980 PF09382 RQC domain Q31a_05980 PF00270 DEAD/DEAH box helicase Q31a_05980 PF00570 HRDC domain Q31a_05980 PF00271 Helicase conserved C-terminal domain Q31a_06030 PF04264 YceI-like domain Q31a_06060 PF00437 Type II/IV secretion system protein Q31a_06140 PF00437 Type II/IV secretion system protein Q31a_06150 PF00069 Protein kinase domain Q31a_06190 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Q31a_06190 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain Q31a_06190 PF00884 Sulfatase Q31a_06190 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain Q31a_06190 PF16347 Domain of unknown function (DUF4976) Q31a_06230 PF00884 Sulfatase Q31a_06240 PF05116 Sucrose-6F-phosphate phosphohydrolase Q31a_06240 PF05166 YcgL domain Q31a_06280 PF07859 alpha/beta hydrolase fold Q31a_06290 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Q31a_06290 PF00925 GTP cyclohydrolase II Q31a_06350 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_06350 PF17863 AAA lid domain Q31a_06370 PF16326 ABC transporter C-terminal domain Q31a_06370 PF00005 ABC transporter Q31a_06370 PF12848 ABC transporter Q31a_06430 PF00581 Rhodanese-like domain Q31a_06470 PF17284 Spermidine synthase tetramerisation domain Q31a_06480 PF00873 AcrB/AcrD/AcrF family Q31a_06500 PF02321 Outer membrane efflux protein Q31a_06550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Q31a_06550 PF14579 Helix-hairpin-helix motif Q31a_06550 PF07733 Bacterial DNA polymerase III alpha NTPase domain Q31a_06550 PF02811 PHP domain Q31a_06590 PF00873 AcrB/AcrD/AcrF family Q31a_06600 PF13533 Biotin-lipoyl like Q31a_06640 PF13180 PDZ domain Q31a_06680 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Q31a_06690 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Q31a_06690 PF00132 Bacterial transferase hexapeptide (six repeats) Q31a_06700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_06700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_06740 PF16864 Dimerisation domain Q31a_06740 PF00891 O-methyltransferase domain Q31a_06780 PF00999 Sodium/hydrogen exchanger family Q31a_06780 PF02254 TrkA-N domain Q31a_06790 PF00884 Sulfatase Q31a_06890 PF00884 Sulfatase Q31a_06930 PF13614 AAA domain Q31a_06960 PF00132 Bacterial transferase hexapeptide (six repeats) Q31a_06990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Q31a_07000 PF00873 AcrB/AcrD/AcrF family Q31a_07030 PF14489 QueF-like protein Q31a_07040 PF04055 Radical SAM superfamily Q31a_07100 PF00694 Aconitase C-terminal domain Q31a_07110 PF00330 Aconitase family (aconitate hydratase) Q31a_07130 PF00009 Elongation factor Tu GTP binding domain Q31a_07130 PF03144 Elongation factor Tu domain 2 Q31a_07130 PF16658 Class II release factor RF3, C-terminal domain Q31a_07140 PF00873 AcrB/AcrD/AcrF family Q31a_07200 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_07200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_07220 PF17863 AAA lid domain Q31a_07220 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_07250 PF00248 Aldo/keto reductase family Q31a_07280 PF00578 AhpC/TSA family Q31a_07290 PF01202 Shikimate kinase Q31a_07370 PF02687 FtsX-like permease family Q31a_07370 PF00005 ABC transporter Q31a_07370 PF12704 MacB-like periplasmic core domain Q31a_07380 PF00005 ABC transporter Q31a_07430 PF00166 Chaperonin 10 Kd subunit Q31a_07440 PF00118 TCP-1/cpn60 chaperonin family Q31a_07450 PF03793 PASTA domain Q31a_07450 PF00069 Protein kinase domain Q31a_07470 PF13087 AAA domain Q31a_07470 PF13086 AAA domain Q31a_07470 PF13195 Protein of unknown function (DUF4011) Q31a_07610 PF00795 Carbon-nitrogen hydrolase Q31a_07620 PF00586 AIR synthase related protein, N-terminal domain Q31a_07620 PF02769 AIR synthase related protein, C-terminal domain Q31a_07620 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Q31a_07630 PF02153 Prephenate dehydrogenase Q31a_07680 PF00795 Carbon-nitrogen hydrolase Q31a_07780 PF09861 Lactate racemase N-terminal domain Q31a_07790 PF02652 L-lactate permease Q31a_07800 PF16385 Domain of unknown function Q31a_07800 PF00884 Sulfatase Q31a_07810 PF00884 Sulfatase Q31a_07810 PF16385 Domain of unknown function Q31a_07850 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_07850 PF17863 AAA lid domain Q31a_08040 PF00356 Bacterial regulatory proteins, lacI family Q31a_08040 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Q31a_08070 PF03793 PASTA domain Q31a_08070 PF00069 Protein kinase domain Q31a_08130 PF00884 Sulfatase Q31a_08140 PF00884 Sulfatase Q31a_08180 PF00884 Sulfatase Q31a_08180 PF16385 Domain of unknown function Q31a_08410 PF00144 Beta-lactamase Q31a_08440 PF00884 Sulfatase Q31a_08450 PF16347 Domain of unknown function (DUF4976) Q31a_08450 PF00884 Sulfatase Q31a_08480 PF03033 Glycosyltransferase family 28 N-terminal domain Q31a_08480 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase Q31a_08580 PF03073 TspO/MBR family Q31a_08660 PF00069 Protein kinase domain Q31a_08660 PF03793 PASTA domain Q31a_08670 PF04542 Sigma-70 region 2 Q31a_08670 PF08281 Sigma-70, region 4 Q31a_08730 PF03309 Type III pantothenate kinase Q31a_08740 PF01018 GTP1/OBG Q31a_08740 PF01926 50S ribosome-binding GTPase Q31a_08750 PF01016 Ribosomal L27 protein Q31a_08770 PF00950 ABC 3 transport family Q31a_08820 PF00920 Dehydratase family Q31a_08850 PF02441 Flavoprotein Q31a_08860 PF01209 ubiE/COQ5 methyltransferase family Q31a_08870 PF02589 LUD domain Q31a_08880 PF01595 Cyclin M transmembrane N-terminal domain Q31a_08880 PF03471 Transporter associated domain Q31a_08880 PF00571 CBS domain Q31a_08890 PF00145 C-5 cytosine-specific DNA methylase Q31a_08910 PF07687 Peptidase dimerisation domain Q31a_08910 PF01546 Peptidase family M20/M25/M40 Q31a_08920 PF00483 Nucleotidyl transferase Q31a_08930 PF02687 FtsX-like permease family Q31a_08930 PF00005 ABC transporter Q31a_08930 PF12704 MacB-like periplasmic core domain Q31a_08970 PF00679 Elongation factor G C-terminus Q31a_08970 PF03144 Elongation factor Tu domain 2 Q31a_08970 PF00009 Elongation factor Tu GTP binding domain Q31a_08970 PF03764 Elongation factor G, domain IV Q31a_08970 PF14492 Elongation Factor G, domain II Q31a_08980 PF03808 Glycosyl transferase WecB/TagA/CpsF family Q31a_09010 PF17760 UvrA interaction domain Q31a_09010 PF17755 UvrA DNA-binding domain Q31a_09040 PF10017 Histidine-specific methyltransferase, SAM-dependent Q31a_09070 PF00471 Ribosomal protein L33 Q31a_09080 PF01196 Ribosomal protein L17 Q31a_09090 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Q31a_09090 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Q31a_09090 PF01000 RNA polymerase Rpb3/RpoA insert domain Q31a_09100 PF00411 Ribosomal protein S11 Q31a_09110 PF00416 Ribosomal protein S13/S18 Q31a_09130 PF00344 SecY translocase Q31a_09140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Q31a_09150 PF00333 Ribosomal protein S5, N-terminal domain Q31a_09150 PF03719 Ribosomal protein S5, C-terminal domain Q31a_09170 PF00347 Ribosomal protein L6 Q31a_09180 PF00410 Ribosomal protein S8 Q31a_09190 PF00281 Ribosomal protein L5 Q31a_09190 PF00673 ribosomal L5P family C-terminus Q31a_09200 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Q31a_09200 PF00467 KOW motif Q31a_09210 PF00238 Ribosomal protein L14p/L23e Q31a_09220 PF00366 Ribosomal protein S17 Q31a_09230 PF00831 Ribosomal L29 protein Q31a_09240 PF00252 Ribosomal protein L16p/L10e Q31a_09250 PF07650 KH domain Q31a_09250 PF00189 Ribosomal protein S3, C-terminal domain Q31a_09260 PF00237 Ribosomal protein L22p/L17e Q31a_09270 PF00203 Ribosomal protein S19 Q31a_09280 PF00181 Ribosomal Proteins L2, RNA binding domain Q31a_09280 PF03947 Ribosomal Proteins L2, C-terminal domain Q31a_09290 PF00276 Ribosomal protein L23 Q31a_09300 PF00573 Ribosomal protein L4/L1 family Q31a_09310 PF00297 Ribosomal protein L3 Q31a_09320 PF00338 Ribosomal protein S10p/S20e Q31a_09340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Q31a_09340 PF07992 Pyridine nucleotide-disulphide oxidoreductase Q31a_09360 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Q31a_09380 PF00437 Type II/IV secretion system protein Q31a_09380 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Q31a_09390 PF00437 Type II/IV secretion system protein Q31a_09400 PF00977 Histidine biosynthesis protein Q31a_09420 PF00691 OmpA family Q31a_09450 PF02472 Biopolymer transport protein ExbD/TolR Q31a_09460 PF01618 MotA/TolQ/ExbB proton channel family Q31a_09480 PF00579 tRNA synthetases class I (W and Y) Q31a_09490 PF01180 Dihydroorotate dehydrogenase Q31a_09500 PF02441 Flavoprotein Q31a_09500 PF04127 DNA / pantothenate metabolism flavoprotein Q31a_09530 PF04127 DNA / pantothenate metabolism flavoprotein Q31a_09530 PF02441 Flavoprotein Q31a_09540 PF01192 RNA polymerase Rpb6 Q31a_09550 PF00625 Guanylate kinase Q31a_09560 PF08340 Domain of unknown function (DUF1732) Q31a_09560 PF03755 YicC-like family, N-terminal region Q31a_09570 PF03840 Preprotein translocase SecG subunit Q31a_09580 PF00121 Triosephosphate isomerase Q31a_09610 PF05050 Methyltransferase FkbM domain Q31a_09620 PF16347 Domain of unknown function (DUF4976) Q31a_09620 PF00884 Sulfatase Q31a_09630 PF02470 MlaD protein Q31a_09640 PF04403 Paraquat-inducible protein A Q31a_09660 PF00588 SpoU rRNA Methylase family Q31a_09680 PF00291 Pyridoxal-phosphate dependent enzyme Q31a_09690 PF00155 Aminotransferase class I and II Q31a_09710 PF07549 SecD/SecF GG Motif Q31a_09710 PF02355 Protein export membrane protein Q31a_09840 PF07993 Male sterility protein Q31a_09840 PF00550 Phosphopantetheine attachment site Q31a_09860 PF12794 Mechanosensitive ion channel inner membrane domain 1 Q31a_09860 PF00924 Mechanosensitive ion channel Q31a_09860 PF12795 Mechanosensitive ion channel porin domain Q31a_09940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Q31a_09940 PF03466 LysR substrate binding domain Q31a_09950 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region Q31a_09950 PF00326 Prolyl oligopeptidase family Q31a_09990 PF04816 tRNA (adenine(22)-N(1))-methyltransferase Q31a_10030 PF01553 Acyltransferase Q31a_10030 PF00501 AMP-binding enzyme Q31a_10030 PF13193 AMP-binding enzyme C-terminal domain Q31a_10040 PF00884 Sulfatase Q31a_10070 PF03884 DNA gyrase inhibitor YacG Q31a_10090 PF01478 Type IV leader peptidase family Q31a_10090 PF06750 Bacterial Peptidase A24 N-terminal domain Q31a_10100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Q31a_10110 PF12704 MacB-like periplasmic core domain Q31a_10110 PF02687 FtsX-like permease family Q31a_10110 PF00005 ABC transporter Q31a_10120 PF00977 Histidine biosynthesis protein Q31a_10230 PF00884 Sulfatase Q31a_10230 PF16347 Domain of unknown function (DUF4976) Q31a_10250 PF03853 YjeF-related protein N-terminus Q31a_10270 PF02594 Uncharacterised ACR, YggU family COG1872 Q31a_10280 PF01168 Alanine racemase, N-terminal domain Q31a_10320 PF07995 Glucose / Sorbosone dehydrogenase Q31a_10330 PF00158 Sigma-54 interaction domain Q31a_10330 PF06956 Regulator of RNA terminal phosphate cyclase Q31a_10350 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain Q31a_10350 PF01137 RNA 3'-terminal phosphate cyclase Q31a_10390 PF00557 Metallopeptidase family M24 Q31a_10400 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Q31a_10420 PF00270 DEAD/DEAH box helicase Q31a_10420 PF00271 Helicase conserved C-terminal domain Q31a_10430 PF00313 'Cold-shock' DNA-binding domain Q31a_10490 PF00009 Elongation factor Tu GTP binding domain Q31a_10490 PF03144 Elongation factor Tu domain 2 Q31a_10490 PF03143 Elongation factor Tu C-terminal domain Q31a_10530 PF00467 KOW motif Q31a_10530 PF02357 Transcription termination factor nusG Q31a_10540 PF03946 Ribosomal protein L11, N-terminal domain Q31a_10540 PF00298 Ribosomal protein L11, RNA binding domain Q31a_10550 PF00687 Ribosomal protein L1p/L10e family Q31a_10560 PF00466 Ribosomal protein L10 Q31a_10570 PF00542 Ribosomal protein L7/L12 C-terminal domain Q31a_10570 PF16320 Ribosomal protein L7/L12 dimerisation domain Q31a_10580 PF02541 Ppx/GppA phosphatase family Q31a_10620 PF01084 Ribosomal protein S18 Q31a_10640 PF01207 Dihydrouridine synthase (Dus) Q31a_10670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_10670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_10730 PF07977 FabA-like domain Q31a_10750 PF00781 Diacylglycerol kinase catalytic domain Q31a_10760 PF00793 DAHP synthetase I family Q31a_10780 PF01741 Large-conductance mechanosensitive channel, MscL Q31a_10790 PF00885 6,7-dimethyl-8-ribityllumazine synthase Q31a_10800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Q31a_10800 PF07497 Rho termination factor, RNA-binding domain Q31a_10860 PF00117 Glutamine amidotransferase class-I Q31a_10890 PF02151 UvrB/uvrC motif Q31a_10890 PF04851 Type III restriction enzyme, res subunit Q31a_10890 PF00271 Helicase conserved C-terminal domain Q31a_10890 PF12344 Ultra-violet resistance protein B Q31a_10890 PF17757 UvrB interaction domain Q31a_10900 PF00069 Protein kinase domain Q31a_10900 PF03793 PASTA domain Q31a_10920 PF00849 RNA pseudouridylate synthase Q31a_10920 PF01479 S4 domain Q31a_10940 PF00459 Inositol monophosphatase family Q31a_11040 PF00156 Phosphoribosyl transferase domain Q31a_11050 PF01472 PUA domain Q31a_11050 PF00696 Amino acid kinase family Q31a_11070 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Q31a_11090 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Q31a_11090 PF03900 Porphobilinogen deaminase, C-terminal domain Q31a_11150 PF01230 HIT domain Q31a_11210 PF00849 RNA pseudouridylate synthase Q31a_11220 PF02554 Carbon starvation protein CstA Q31a_11220 PF13722 5TM C-terminal transporter carbon starvation CstA Q31a_11230 PF00375 Sodium:dicarboxylate symporter family Q31a_11240 PF03600 Citrate transporter Q31a_11260 PF03958 Bacterial type II/III secretion system short domain Q31a_11260 PF00263 Bacterial type II and III secretion system protein Q31a_11310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_11310 PF01627 Hpt domain Q31a_11310 PF00072 Response regulator receiver domain Q31a_11310 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Q31a_11310 PF00672 HAMP domain Q31a_11310 PF00512 His Kinase A (phospho-acceptor) domain Q31a_11370 PF00884 Sulfatase Q31a_11380 PF00171 Aldehyde dehydrogenase family Q31a_11430 PF00557 Metallopeptidase family M24 Q31a_11440 PF00958 GMP synthase C terminal domain Q31a_11440 PF02540 NAD synthase Q31a_11440 PF00117 Glutamine amidotransferase class-I Q31a_11450 PF00176 SNF2 family N-terminal domain Q31a_11450 PF00271 Helicase conserved C-terminal domain Q31a_11450 PF04434 SWIM zinc finger Q31a_11510 PF14535 AMP-binding enzyme C-terminal domain Q31a_11510 PF00501 AMP-binding enzyme Q31a_11530 PF04377 Arginine-tRNA-protein transferase, C terminus Q31a_11530 PF04376 Arginine-tRNA-protein transferase, N terminus Q31a_11550 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Q31a_11550 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Q31a_11560 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Q31a_11560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Q31a_11630 PF02599 Global regulator protein family Q31a_11840 PF01548 Transposase Q31a_11840 PF02371 Transposase IS116/IS110/IS902 family Q31a_11920 PF13495 Phage integrase, N-terminal SAM-like domain Q31a_11920 PF00589 Phage integrase family Q31a_12280 PF07729 FCD domain Q31a_12280 PF00392 Bacterial regulatory proteins, gntR family Q31a_12290 PF00106 short chain dehydrogenase Q31a_12320 PF03309 Type III pantothenate kinase Q31a_12320 PF02237 Biotin protein ligase C terminal domain Q31a_12320 PF03099 Biotin/lipoate A/B protein ligase family Q31a_12330 PF14032 PknH-like extracellular domain Q31a_12330 PF00069 Protein kinase domain Q31a_12350 PF07516 SecA Wing and Scaffold domain Q31a_12350 PF01043 SecA preprotein cross-linking domain Q31a_12350 PF02810 SEC-C motif Q31a_12350 PF07517 SecA DEAD-like domain Q31a_12360 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Q31a_12360 PF00534 Glycosyl transferases group 1 Q31a_12380 PF04983 RNA polymerase Rpb1, domain 3 Q31a_12380 PF00623 RNA polymerase Rpb1, domain 2 Q31a_12380 PF05000 RNA polymerase Rpb1, domain 4 Q31a_12380 PF04997 RNA polymerase Rpb1, domain 1 Q31a_12380 PF04998 RNA polymerase Rpb1, domain 5 Q31a_12390 PF04561 RNA polymerase Rpb2, domain 2 Q31a_12390 PF10385 RNA polymerase beta subunit external 1 domain Q31a_12390 PF04560 RNA polymerase Rpb2, domain 7 Q31a_12390 PF04563 RNA polymerase beta subunit Q31a_12390 PF04565 RNA polymerase Rpb2, domain 3 Q31a_12390 PF00562 RNA polymerase Rpb2, domain 6 Q31a_12400 PF00437 Type II/IV secretion system protein Q31a_12400 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Q31a_12410 PF00437 Type II/IV secretion system protein Q31a_12420 PF00437 Type II/IV secretion system protein Q31a_12420 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Q31a_12430 PF00482 Type II secretion system (T2SS), protein F Q31a_12440 PF08334 Type II secretion system (T2SS), protein G Q31a_12440 PF07963 Prokaryotic N-terminal methylation motif Q31a_12510 PF00135 Carboxylesterase family Q31a_12520 PF00365 Phosphofructokinase Q31a_12530 PF00289 Biotin carboxylase, N-terminal domain Q31a_12530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Q31a_12530 PF02785 Biotin carboxylase C-terminal domain Q31a_12540 PF00364 Biotin-requiring enzyme Q31a_12550 PF00557 Metallopeptidase family M24 Q31a_12550 PF01321 Creatinase/Prolidase N-terminal domain Q31a_12570 PF00710 Asparaginase, N-terminal Q31a_12570 PF17763 Glutaminase/Asparaginase C-terminal domain Q31a_12590 PF05199 GMC oxidoreductase Q31a_12610 PF13368 Topoisomerase C-terminal repeat Q31a_12610 PF01131 DNA topoisomerase Q31a_12610 PF01751 Toprim domain Q31a_12660 PF00534 Glycosyl transferases group 1 Q31a_12660 PF08323 Starch synthase catalytic domain Q31a_12690 PF00990 Diguanylate cyclase, GGDEF domain Q31a_12760 PF12019 Type II transport protein GspH Q31a_12780 PF00482 Type II secretion system (T2SS), protein F Q31a_12790 PF00437 Type II/IV secretion system protein Q31a_12790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Q31a_12890 PF00884 Sulfatase Q31a_12900 PF16347 Domain of unknown function (DUF4976) Q31a_12900 PF00884 Sulfatase Q31a_12980 PF00005 ABC transporter Q31a_12980 PF12848 ABC transporter Q31a_13020 PF17991 Thioredoxin like C-terminal domain Q31a_13020 PF02683 Cytochrome C biogenesis protein transmembrane region Q31a_13020 PF00578 AhpC/TSA family Q31a_13030 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Q31a_13030 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Q31a_13040 PF00248 Aldo/keto reductase family Q31a_13050 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Q31a_13050 PF00753 Metallo-beta-lactamase superfamily Q31a_13050 PF10996 Beta-Casp domain Q31a_13070 PF09285 Elongation factor P, C-terminal Q31a_13070 PF01132 Elongation factor P (EF-P) OB domain Q31a_13070 PF08207 Elongation factor P (EF-P) KOW-like domain Q31a_13100 PF00106 short chain dehydrogenase Q31a_13110 PF00270 DEAD/DEAH box helicase Q31a_13110 PF00271 Helicase conserved C-terminal domain Q31a_13110 PF03880 DbpA RNA binding domain Q31a_13180 PF00005 ABC transporter Q31a_13180 PF16326 ABC transporter C-terminal domain Q31a_13180 PF12848 ABC transporter Q31a_13340 PF02754 Cysteine-rich domain Q31a_13360 PF03764 Elongation factor G, domain IV Q31a_13360 PF00009 Elongation factor Tu GTP binding domain Q31a_13360 PF03144 Elongation factor Tu domain 2 Q31a_13360 PF14492 Elongation Factor G, domain II Q31a_13360 PF00679 Elongation factor G C-terminus Q31a_13370 PF00177 Ribosomal protein S7p/S5e Q31a_13380 PF00164 Ribosomal protein S12/S23 Q31a_13400 PF02219 Methylenetetrahydrofolate reductase Q31a_13420 PF01641 SelR domain Q31a_13430 PF04542 Sigma-70 region 2 Q31a_13430 PF00140 Sigma-70 factor, region 1.2 Q31a_13430 PF04539 Sigma-70 region 3 Q31a_13430 PF04545 Sigma-70, region 4 Q31a_13430 PF03979 Sigma-70 factor, region 1.1 Q31a_13440 PF08275 DNA primase catalytic core, N-terminal domain Q31a_13440 PF10410 DnaB-helicase binding domain of primase Q31a_13440 PF01807 CHC2 zinc finger Q31a_13460 PF02833 DHHA2 domain Q31a_13460 PF00571 CBS domain Q31a_13460 PF07085 DRTGG domain Q31a_13460 PF01368 DHH family Q31a_13470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Q31a_13470 PF02154 Flagellar motor switch protein FliM Q31a_13480 PF00171 Aldehyde dehydrogenase family Q31a_13490 PF16363 GDP-mannose 4,6 dehydratase Q31a_13600 PF03458 UPF0126 domain Q31a_13610 PF06628 Catalase-related immune-responsive Q31a_13610 PF00199 Catalase Q31a_13650 PF08244 Glycosyl hydrolases family 32 C terminal Q31a_13650 PF00251 Glycosyl hydrolases family 32 N-terminal domain Q31a_13660 PF00582 Universal stress protein family Q31a_13670 PF00582 Universal stress protein family Q31a_13680 PF01272 Transcription elongation factor, GreA/GreB, C-term Q31a_13680 PF14760 Rnk N-terminus Q31a_13720 PF03600 Citrate transporter Q31a_13720 PF02080 TrkA-C domain Q31a_13740 PF00589 Phage integrase family Q31a_13740 PF13495 Phage integrase, N-terminal SAM-like domain Q31a_13960 PF00665 Integrase core domain Q31a_13990 PF00550 Phosphopantetheine attachment site Q31a_14050 PF00474 Sodium:solute symporter family Q31a_14090 PF00923 Transaldolase/Fructose-6-phosphate aldolase Q31a_14100 PF00196 Bacterial regulatory proteins, luxR family Q31a_14100 PF00072 Response regulator receiver domain Q31a_14130 PF00884 Sulfatase Q31a_14130 PF16385 Domain of unknown function Q31a_14180 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Q31a_14180 PF01926 50S ribosome-binding GTPase Q31a_14210 PF02082 Transcriptional regulator Q31a_14280 PF00312 Ribosomal protein S15 Q31a_14290 PF00013 KH domain Q31a_14290 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Q31a_14290 PF01138 3' exoribonuclease family, domain 1 Q31a_14290 PF03725 3' exoribonuclease family, domain 2 Q31a_14290 PF00575 S1 RNA binding domain Q31a_14330 PF01926 50S ribosome-binding GTPase Q31a_14330 PF10396 GTP-binding protein TrmE N-terminus Q31a_14330 PF12631 MnmE helical domain Q31a_14340 PF03793 PASTA domain Q31a_14340 PF00069 Protein kinase domain Q31a_14360 PF13361 UvrD-like helicase C-terminal domain Q31a_14360 PF00580 UvrD/REP helicase N-terminal domain Q31a_14370 PF00072 Response regulator receiver domain Q31a_14390 PF02308 MgtC family Q31a_14410 PF05532 CsbD-like Q31a_14430 PF00128 Alpha amylase, catalytic domain Q31a_14430 PF02806 Alpha amylase, C-terminal all-beta domain Q31a_14430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Q31a_14440 PF03065 Glycosyl hydrolase family 57 Q31a_14440 PF09094 Domain of unknown function (DUF1925) Q31a_14440 PF09095 Domain of unknown function (DUF1926) Q31a_14460 PF01011 PQQ enzyme repeat Q31a_14510 PF00082 Subtilase family Q31a_14520 PF00072 Response regulator receiver domain Q31a_14520 PF00512 His Kinase A (phospho-acceptor) domain Q31a_14520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Q31a_14520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_14520 PF00672 HAMP domain Q31a_14520 PF01627 Hpt domain Q31a_14550 PF16347 Domain of unknown function (DUF4976) Q31a_14550 PF00884 Sulfatase Q31a_14570 PF01474 Class-II DAHP synthetase family Q31a_14580 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region Q31a_14580 PF07676 WD40-like Beta Propeller Repeat Q31a_14580 PF00326 Prolyl oligopeptidase family Q31a_14590 PF02558 Ketopantoate reductase PanE/ApbA Q31a_14590 PF08546 Ketopantoate reductase PanE/ApbA C terminal Q31a_14610 PF07963 Prokaryotic N-terminal methylation motif Q31a_14610 PF08334 Type II secretion system (T2SS), protein G Q31a_14700 PF03793 PASTA domain Q31a_14700 PF00069 Protein kinase domain Q31a_14780 PF00069 Protein kinase domain Q31a_14780 PF03793 PASTA domain Q31a_14900 PF00171 Aldehyde dehydrogenase family Q31a_14910 PF05199 GMC oxidoreductase Q31a_14970 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_14970 PF17863 AAA lid domain Q31a_15020 PF02514 CobN/Magnesium Chelatase Q31a_15140 PF00069 Protein kinase domain Q31a_15140 PF03793 PASTA domain Q31a_15180 PF03793 PASTA domain Q31a_15180 PF00069 Protein kinase domain Q31a_15220 PF00884 Sulfatase Q31a_15250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Q31a_15260 PF00873 AcrB/AcrD/AcrF family Q31a_15270 PF02954 Bacterial regulatory protein, Fis family Q31a_15270 PF00072 Response regulator receiver domain Q31a_15270 PF00158 Sigma-54 interaction domain Q31a_15280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_15280 PF00989 PAS fold Q31a_15280 PF00512 His Kinase A (phospho-acceptor) domain Q31a_15290 PF03009 Glycerophosphoryl diester phosphodiesterase family Q31a_15320 PF05552 Conserved TM helix Q31a_15320 PF00924 Mechanosensitive ion channel Q31a_15340 PF00107 Zinc-binding dehydrogenase Q31a_15340 PF08240 Alcohol dehydrogenase GroES-like domain Q31a_15350 PF05368 NmrA-like family Q31a_15370 PF00884 Sulfatase Q31a_15390 PF02469 Fasciclin domain Q31a_15400 PF00140 Sigma-70 factor, region 1.2 Q31a_15400 PF04545 Sigma-70, region 4 Q31a_15400 PF04542 Sigma-70 region 2 Q31a_15400 PF04539 Sigma-70 region 3 Q31a_15500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Q31a_15500 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Q31a_15500 PF02142 MGS-like domain Q31a_15510 PF00293 NUDIX domain Q31a_15520 PF00884 Sulfatase Q31a_15550 PF07238 PilZ domain Q31a_15550 PF00535 Glycosyl transferase family 2 Q31a_15550 PF03170 Bacterial cellulose synthase subunit Q31a_15580 PF00884 Sulfatase Q31a_15600 PF00743 Flavin-binding monooxygenase-like Q31a_15630 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Q31a_15640 PF00392 Bacterial regulatory proteins, gntR family Q31a_15650 PF00005 ABC transporter Q31a_15680 PF00155 Aminotransferase class I and II Q31a_15680 PF00392 Bacterial regulatory proteins, gntR family Q31a_15690 PF04468 PSP1 C-terminal conserved region Q31a_15720 PF00490 Delta-aminolevulinic acid dehydratase Q31a_15730 PF03825 Nucleoside H+ symporter Q31a_15770 PF00403 Heavy-metal-associated domain Q31a_15780 PF00331 Glycosyl hydrolase family 10 Q31a_15780 PF07859 alpha/beta hydrolase fold Q31a_15810 PF01029 NusB family Q31a_15820 PF04079 Segregation and condensation complex subunit ScpB Q31a_15830 PF00109 Beta-ketoacyl synthase, N-terminal domain Q31a_15830 PF00107 Zinc-binding dehydrogenase Q31a_15830 PF08240 Alcohol dehydrogenase GroES-like domain Q31a_15830 PF00698 Acyl transferase domain Q31a_15830 PF16197 Ketoacyl-synthetase C-terminal extension Q31a_15830 PF14765 Polyketide synthase dehydratase Q31a_15830 PF02801 Beta-ketoacyl synthase, C-terminal domain Q31a_15830 PF08659 KR domain Q31a_15830 PF00550 Phosphopantetheine attachment site Q31a_15870 PF00920 Dehydratase family Q31a_15940 PF00156 Phosphoribosyl transferase domain Q31a_15950 PF08459 UvrC Helix-hairpin-helix N-terminal Q31a_15950 PF02151 UvrB/uvrC motif Q31a_15950 PF01541 GIY-YIG catalytic domain Q31a_16010 PF00437 Type II/IV secretion system protein Q31a_16040 PF10282 Lactonase, 7-bladed beta-propeller Q31a_16050 PF03793 PASTA domain Q31a_16050 PF00069 Protein kinase domain Q31a_16060 PF00884 Sulfatase Q31a_16070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Q31a_16080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Q31a_16110 PF00171 Aldehyde dehydrogenase family Q31a_16120 PF00512 His Kinase A (phospho-acceptor) domain Q31a_16120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_16120 PF08448 PAS fold Q31a_16120 PF13188 PAS domain Q31a_16120 PF00072 Response regulator receiver domain Q31a_16150 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Q31a_16150 PF00117 Glutamine amidotransferase class-I Q31a_16160 PF02910 Fumarate reductase flavoprotein C-term Q31a_16160 PF00890 FAD binding domain Q31a_16170 PF00884 Sulfatase Q31a_16170 PF16385 Domain of unknown function Q31a_16190 PF02390 Putative methyltransferase Q31a_16250 PF02563 Polysaccharide biosynthesis/export protein Q31a_16250 PF10531 SLBB domain Q31a_16270 PF17820 PDZ domain Q31a_16270 PF02163 Peptidase family M50 Q31a_16280 PF13288 DXP reductoisomerase C-terminal domain Q31a_16280 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Q31a_16280 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Q31a_16290 PF17862 AAA+ lid domain Q31a_16290 PF00004 ATPase family associated with various cellular activities (AAA) Q31a_16290 PF01434 Peptidase family M41 Q31a_16310 PF00069 Protein kinase domain Q31a_16310 PF03793 PASTA domain Q31a_16320 PF08281 Sigma-70, region 4 Q31a_16320 PF04542 Sigma-70 region 2 Q31a_16340 PF00413 Matrixin Q31a_16410 PF04945 YHS domain Q31a_16420 PF02583 Metal-sensitive transcriptional repressor Q31a_16450 PF00873 AcrB/AcrD/AcrF family Q31a_16460 PF04945 YHS domain Q31a_16490 PF04542 Sigma-70 region 2 Q31a_16490 PF08281 Sigma-70, region 4 Q31a_16520 PF12833 Helix-turn-helix domain Q31a_16520 PF02311 AraC-like ligand binding domain Q31a_16560 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Q31a_16560 PF00476 DNA polymerase family A Q31a_16560 PF09281 Taq polymerase, exonuclease Q31a_16560 PF01367 5'-3' exonuclease, C-terminal SAM fold Q31a_16620 PF06134 L-rhamnose isomerase (RhaA) Q31a_16630 PF17755 UvrA DNA-binding domain Q31a_16710 PF13180 PDZ domain Q31a_16800 PF13847 Methyltransferase domain Q31a_16810 PF02374 Anion-transporting ATPase Q31a_16860 PF00085 Thioredoxin Q31a_16910 PF00672 HAMP domain Q31a_16910 PF01966 HD domain Q31a_16940 PF00403 Heavy-metal-associated domain Q31a_16940 PF07992 Pyridine nucleotide-disulphide oxidoreductase Q31a_16940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Q31a_17000 PF00535 Glycosyl transferase family 2 Q31a_17020 PF13847 Methyltransferase domain Q31a_17050 PF01384 Phosphate transporter family Q31a_17060 PF00535 Glycosyl transferase family 2 Q31a_17080 PF08281 Sigma-70, region 4 Q31a_17080 PF04542 Sigma-70 region 2 Q31a_17140 PF03795 YCII-related domain Q31a_17160 PF03795 YCII-related domain Q31a_17540 PF01367 5'-3' exonuclease, C-terminal SAM fold Q31a_17540 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Q31a_17540 PF09281 Taq polymerase, exonuclease Q31a_17540 PF00476 DNA polymerase family A Q31a_17590 PF02599 Global regulator protein family Q31a_17610 PF00520 Ion transport protein Q31a_17610 PF00027 Cyclic nucleotide-binding domain Q31a_17630 PF00565 Staphylococcal nuclease homologue Q31a_17650 PF17820 PDZ domain Q31a_17650 PF13180 PDZ domain Q31a_17660 PF00117 Glutamine amidotransferase class-I Q31a_17670 PF01488 Shikimate / quinate 5-dehydrogenase Q31a_17670 PF08501 Shikimate dehydrogenase substrate binding domain Q31a_17670 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Q31a_17710 PF04542 Sigma-70 region 2 Q31a_17710 PF04545 Sigma-70, region 4 Q31a_17760 PF08240 Alcohol dehydrogenase GroES-like domain Q31a_17760 PF00107 Zinc-binding dehydrogenase Q31a_17770 PF01261 Xylose isomerase-like TIM barrel Q31a_17790 PF00005 ABC transporter Q31a_17790 PF00664 ABC transporter transmembrane region Q31a_17810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Q31a_17890 PF05401 Nodulation protein S (NodS) Q31a_17930 PF00294 pfkB family carbohydrate kinase Q31a_17940 PF00534 Glycosyl transferases group 1 Q31a_17940 PF00862 Sucrose synthase Q31a_17950 PF00128 Alpha amylase, catalytic domain Q31a_17990 PF00248 Aldo/keto reductase family Q31a_18000 PF03176 MMPL family Q31a_18020 PF00543 Nitrogen regulatory protein P-II Q31a_18100 PF03150 Di-haem cytochrome c peroxidase Q31a_18120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Q31a_18120 PF01872 RibD C-terminal domain Q31a_18170 PF00884 Sulfatase Q31a_18170 PF16347 Domain of unknown function (DUF4976) Q31a_18220 PF00884 Sulfatase Q31a_18280 PF00884 Sulfatase Q31a_18280 PF16347 Domain of unknown function (DUF4976) Q31a_18350 PF00535 Glycosyl transferase family 2 Q31a_18440 PF01625 Peptide methionine sulfoxide reductase Q31a_18440 PF01641 SelR domain Q31a_18450 PF03932 CutC family Q31a_18460 PF01380 SIS domain Q31a_18480 PF04228 Putative neutral zinc metallopeptidase Q31a_18500 PF00266 Aminotransferase class-V Q31a_18510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Q31a_18510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Q31a_18560 PF02599 Global regulator protein family Q31a_18580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Q31a_18580 PF01367 5'-3' exonuclease, C-terminal SAM fold Q31a_18580 PF09281 Taq polymerase, exonuclease Q31a_18580 PF00476 DNA polymerase family A Q31a_18610 PF04545 Sigma-70, region 4 Q31a_18610 PF04539 Sigma-70 region 3 Q31a_18610 PF04542 Sigma-70 region 2 Q31a_18780 PF01555 DNA methylase Q31a_18960 PF04986 Putative transposase Q31a_18960 PF14319 Transposase zinc-binding domain Q31a_18980 PF04986 Putative transposase Q31a_18980 PF14319 Transposase zinc-binding domain Q31a_19040 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Q31a_19040 PF01348 Type II intron maturase Q31a_19130 PF00069 Protein kinase domain Q31a_19150 PF02245 Methylpurine-DNA glycosylase (MPG) Q31a_19190 PF03167 Uracil DNA glycosylase superfamily Q31a_19200 PF00291 Pyridoxal-phosphate dependent enzyme Q31a_19300 PF05114 Protein of unknown function (DUF692) Q31a_19370 PF00850 Histone deacetylase domain Q31a_19380 PF13380 CoA binding domain Q31a_19380 PF13607 Succinyl-CoA ligase like flavodoxin domain Q31a_19380 PF00583 Acetyltransferase (GNAT) family Q31a_19390 PF00085 Thioredoxin Q31a_19410 PF00107 Zinc-binding dehydrogenase Q31a_19410 PF08240 Alcohol dehydrogenase GroES-like domain Q31a_19420 PF00300 Histidine phosphatase superfamily (branch 1) Q31a_19450 PF04052 TolB amino-terminal domain Q31a_19450 PF07676 WD40-like Beta Propeller Repeat Q31a_19500 PF16355 Domain of unknown function (DUF4982) Q31a_19500 PF00703 Glycosyl hydrolases family 2 Q31a_19500 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Q31a_19500 PF02837 Glycosyl hydrolases family 2, sugar binding domain Q31a_19520 PF00072 Response regulator receiver domain Q31a_19520 PF00158 Sigma-54 interaction domain Q31a_19520 PF02954 Bacterial regulatory protein, Fis family Q31a_19530 PF00512 His Kinase A (phospho-acceptor) domain Q31a_19530 PF13188 PAS domain Q31a_19530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_19530 PF08448 PAS fold Q31a_19530 PF00072 Response regulator receiver domain Q31a_19550 PF17820 PDZ domain Q31a_19550 PF13180 PDZ domain Q31a_19570 PF08241 Methyltransferase domain Q31a_19660 PF10518 TAT (twin-arginine translocation) pathway signal sequence Q31a_19660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_19710 PF00107 Zinc-binding dehydrogenase Q31a_19710 PF08240 Alcohol dehydrogenase GroES-like domain Q31a_19750 PF01546 Peptidase family M20/M25/M40 Q31a_19750 PF07687 Peptidase dimerisation domain Q31a_19780 PF01790 Prolipoprotein diacylglyceryl transferase Q31a_19810 PF00696 Amino acid kinase family Q31a_19820 PF01765 Ribosome recycling factor Q31a_19850 PF02163 Peptidase family M50 Q31a_19850 PF00571 CBS domain Q31a_19860 PF07196 Flagellin hook IN motif Q31a_19860 PF02465 Flagellar hook-associated protein 2 N-terminus Q31a_19860 PF07195 Flagellar hook-associated protein 2 C-terminus Q31a_19870 PF00669 Bacterial flagellin N-terminal helical region Q31a_19870 PF00700 Bacterial flagellin C-terminal helical region Q31a_19870 PF00669 Bacterial flagellin N-terminal helical region Q31a_19870 PF07196 Flagellin hook IN motif Q31a_19870 PF00700 Bacterial flagellin C-terminal helical region Q31a_19870 PF07196 Flagellin hook IN motif Q31a_19880 PF02599 Global regulator protein family Q31a_19890 PF02623 FliW protein Q31a_19900 PF02954 Bacterial regulatory protein, Fis family Q31a_19900 PF00158 Sigma-54 interaction domain Q31a_19900 PF00072 Response regulator receiver domain Q31a_19910 PF00155 Aminotransferase class I and II Q31a_19920 PF10502 Signal peptidase, peptidase S26 Q31a_19930 PF00005 ABC transporter Q31a_19940 PF00069 Protein kinase domain Q31a_19940 PF03793 PASTA domain Q31a_19950 PF00004 ATPase family associated with various cellular activities (AAA) Q31a_19950 PF17758 Proteasomal ATPase OB N-terminal domain Q31a_19950 PF16450 Proteasomal ATPase OB C-terminal domain Q31a_19960 PF00563 EAL domain Q31a_19960 PF00196 Bacterial regulatory proteins, luxR family Q31a_19990 PF00920 Dehydratase family Q31a_20000 PF02447 GntP family permease Q31a_20060 PF05947 Type VI secretion system, TssF Q31a_20090 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Q31a_20100 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 Q31a_20160 PF06715 Gp5 C-terminal repeat (3 copies) Q31a_20160 PF04717 Type VI secretion system, phage-baseplate injector Q31a_20250 PF00990 Diguanylate cyclase, GGDEF domain Q31a_20250 PF00563 EAL domain Q31a_20250 PF03707 Bacterial signalling protein N terminal repeat Q31a_20270 PF00884 Sulfatase Q31a_20270 PF16385 Domain of unknown function Q31a_20290 PF02424 ApbE family Q31a_20390 PF01975 Survival protein SurE Q31a_20410 PF12392 Collagenase Q31a_20410 PF01136 Peptidase family U32 Q31a_20480 PF02597 ThiS family Q31a_20480 PF05690 Thiazole biosynthesis protein ThiG Q31a_20490 PF05690 Thiazole biosynthesis protein ThiG Q31a_20540 PF00270 DEAD/DEAH box helicase Q31a_20540 PF04408 Helicase associated domain (HA2) Q31a_20540 PF00271 Helicase conserved C-terminal domain Q31a_20540 PF08482 ATP-dependent helicase C-terminal Q31a_20560 PF12706 Beta-lactamase superfamily domain Q31a_20560 PF03099 Biotin/lipoate A/B protein ligase family Q31a_20580 PF00571 CBS domain Q31a_20580 PF01743 Poly A polymerase head domain Q31a_20610 PF09423 PhoD-like phosphatase Q31a_20610 PF16655 PhoD-like phosphatase, N-terminal domain Q31a_20620 PF03652 Holliday junction resolvase Q31a_20690 PF07687 Peptidase dimerisation domain Q31a_20690 PF01546 Peptidase family M20/M25/M40 Q31a_20700 PF00857 Isochorismatase family Q31a_20720 PF04321 RmlD substrate binding domain Q31a_20730 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase Q31a_20730 PF00756 Putative esterase Q31a_20770 PF00156 Phosphoribosyl transferase domain Q31a_20790 PF01263 Aldose 1-epimerase Q31a_20800 PF00581 Rhodanese-like domain Q31a_20910 PF01266 FAD dependent oxidoreductase Q31a_20910 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Q31a_20920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Q31a_20920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Q31a_20970 PF00575 S1 RNA binding domain Q31a_21030 PF00809 Pterin binding enzyme Q31a_21040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Q31a_21040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Q31a_21110 PF13180 PDZ domain Q31a_21110 PF17820 PDZ domain Q31a_21160 PF13086 AAA domain Q31a_21160 PF13195 Protein of unknown function (DUF4011) Q31a_21160 PF13087 AAA domain Q31a_21180 PF09285 Elongation factor P, C-terminal Q31a_21180 PF08207 Elongation factor P (EF-P) KOW-like domain Q31a_21180 PF01132 Elongation factor P (EF-P) OB domain Q31a_21190 PF04055 Radical SAM superfamily Q31a_21200 PF08245 Mur ligase middle domain Q31a_21200 PF02875 Mur ligase family, glutamate ligase domain Q31a_21220 PF00005 ABC transporter Q31a_21280 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Q31a_21280 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Q31a_21300 PF13188 PAS domain Q31a_21300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_21300 PF08448 PAS fold Q31a_21300 PF00072 Response regulator receiver domain Q31a_21300 PF00512 His Kinase A (phospho-acceptor) domain Q31a_21360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_21360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_21380 PF00180 Isocitrate/isopropylmalate dehydrogenase Q31a_21760 PF00872 Transposase, Mutator family Q31a_21770 PF01757 Acyltransferase family Q31a_21860 PF04055 Radical SAM superfamily Q31a_21870 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Q31a_21890 PF03710 Glutamate-ammonia ligase adenylyltransferase Q31a_21890 PF08335 GlnD PII-uridylyltransferase Q31a_21920 PF00218 Indole-3-glycerol phosphate synthase Q31a_21930 PF01808 AICARFT/IMPCHase bienzyme Q31a_21930 PF02142 MGS-like domain Q31a_21940 PF00829 Ribosomal prokaryotic L21 protein Q31a_21960 PF00005 ABC transporter Q31a_21960 PF13732 Domain of unknown function (DUF4162) Q31a_21970 PF01050 Mannose-6-phosphate isomerase Q31a_21970 PF00483 Nucleotidyl transferase Q31a_22030 PF00348 Polyprenyl synthetase Q31a_22070 PF00884 Sulfatase Q31a_22070 PF16347 Domain of unknown function (DUF4976) Q31a_22080 PF13378 Enolase C-terminal domain-like Q31a_22080 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Q31a_22200 PF17863 AAA lid domain Q31a_22200 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_22210 PF01219 Prokaryotic diacylglycerol kinase Q31a_22220 PF00152 tRNA synthetases class II (D, K and N) Q31a_22220 PF01336 OB-fold nucleic acid binding domain Q31a_22230 PF07992 Pyridine nucleotide-disulphide oxidoreductase Q31a_22240 PF00939 Sodium:sulfate symporter transmembrane region Q31a_22280 PF01593 Flavin containing amine oxidoreductase Q31a_22300 PF01039 Carboxyl transferase domain Q31a_22300 PF17848 Acetyl-coA carboxylase zinc finger domain Q31a_22320 PF00834 Ribulose-phosphate 3 epimerase family Q31a_22390 PF01103 Surface antigen Q31a_22390 PF07244 Surface antigen variable number repeat Q31a_22440 PF06971 Putative DNA-binding protein N-terminus Q31a_22440 PF02629 CoA binding domain Q31a_22480 PF01026 TatD related DNase Q31a_22490 PF00579 tRNA synthetases class I (W and Y) Q31a_22490 PF01479 S4 domain Q31a_22500 PF00155 Aminotransferase class I and II Q31a_22510 PF00551 Formyl transferase Q31a_22510 PF02911 Formyl transferase, C-terminal domain Q31a_22510 PF01370 NAD dependent epimerase/dehydratase family Q31a_22560 PF00171 Aldehyde dehydrogenase family Q31a_22570 PF09179 TilS substrate binding domain Q31a_22570 PF01171 PP-loop family Q31a_22580 PF01370 NAD dependent epimerase/dehydratase family Q31a_22590 PF01702 Queuine tRNA-ribosyltransferase Q31a_22600 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Q31a_22600 PF01000 RNA polymerase Rpb3/RpoA insert domain Q31a_22600 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Q31a_22620 PF01502 Phosphoribosyl-AMP cyclohydrolase Q31a_22700 PF02599 Global regulator protein family Q31a_22720 PF02754 Cysteine-rich domain Q31a_22720 PF13183 4Fe-4S dicluster domain Q31a_22750 PF03358 NADPH-dependent FMN reductase Q31a_22760 PF00109 Beta-ketoacyl synthase, N-terminal domain Q31a_22760 PF02801 Beta-ketoacyl synthase, C-terminal domain Q31a_22780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Q31a_22780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Q31a_22820 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Q31a_22890 PF08443 RimK-like ATP-grasp domain Q31a_22890 PF18030 RimK PreATP-grasp domain Q31a_22900 PF04551 GcpE protein Q31a_22920 PF01925 Sulfite exporter TauE/SafE Q31a_22930 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Q31a_22930 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Q31a_22940 PF02622 Uncharacterized ACR, COG1678 Q31a_22950 PF00149 Calcineurin-like phosphoesterase Q31a_22960 PF00501 AMP-binding enzyme Q31a_22970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_22970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_22980 PF02424 ApbE family Q31a_22990 PF07722 Peptidase C26 Q31a_23000 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Q31a_23000 PF00108 Thiolase, N-terminal domain Q31a_23020 PF01176 Translation initiation factor 1A / IF-1 Q31a_23050 PF02616 Segregation and condensation protein ScpA Q31a_23060 PF02445 Quinolinate synthetase A protein Q31a_23090 PF00072 Response regulator receiver domain Q31a_23100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_23100 PF01627 Hpt domain Q31a_23100 PF00072 Response regulator receiver domain Q31a_23100 PF02895 Signal transducing histidine kinase, homodimeric domain Q31a_23100 PF01584 CheW-like domain Q31a_23110 PF01584 CheW-like domain Q31a_23120 PF00072 Response regulator receiver domain Q31a_23120 PF01339 CheB methylesterase Q31a_23130 PF01739 CheR methyltransferase, SAM binding domain Q31a_23130 PF03705 CheR methyltransferase, all-alpha domain Q31a_23140 PF17762 HTH domain found in ParB protein Q31a_23140 PF02195 ParB-like nuclease domain Q31a_23150 PF13614 AAA domain Q31a_23170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Q31a_23170 PF00672 HAMP domain Q31a_23200 PF00216 Bacterial DNA-binding protein Q31a_23220 PF00005 ABC transporter Q31a_23220 PF16326 ABC transporter C-terminal domain Q31a_23220 PF12848 ABC transporter Q31a_23280 PF08459 UvrC Helix-hairpin-helix N-terminal Q31a_23280 PF01541 GIY-YIG catalytic domain Q31a_23280 PF02151 UvrB/uvrC motif Q31a_23300 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Q31a_23330 PF00114 Pilin (bacterial filament) Q31a_23330 PF07963 Prokaryotic N-terminal methylation motif Q31a_23350 PF13533 Biotin-lipoyl like Q31a_23360 PF00873 AcrB/AcrD/AcrF family Q31a_23370 PF01509 TruB family pseudouridylate synthase (N terminal domain) Q31a_23380 PF00528 Binding-protein-dependent transport system inner membrane component Q31a_23400 PF00128 Alpha amylase, catalytic domain Q31a_23400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Q31a_23410 PF02589 LUD domain Q31a_23410 PF13183 4Fe-4S dicluster domain Q31a_23410 PF11870 Domain of unknown function (DUF3390) Q31a_23420 PF05746 DALR anticodon binding domain Q31a_23420 PF00750 tRNA synthetases class I (R) Q31a_23420 PF03485 Arginyl tRNA synthetase N terminal domain Q31a_23440 PF00578 AhpC/TSA family Q31a_23460 PF00156 Phosphoribosyl transferase domain Q31a_23560 PF01969 Protein of unknown function DUF111 Q31a_23580 PF00149 Calcineurin-like phosphoesterase Q31a_23650 PF00069 Protein kinase domain Q31a_23650 PF03793 PASTA domain Q31a_23670 PF00282 Pyridoxal-dependent decarboxylase conserved domain Q31a_23680 PF01968 Hydantoinase/oxoprolinase Q31a_23680 PF05378 Hydantoinase/oxoprolinase N-terminal region Q31a_23700 PF13472 GDSL-like Lipase/Acylhydrolase family Q31a_23700 PF07859 alpha/beta hydrolase fold Q31a_23720 PF02464 Competence-damaged protein Q31a_23720 PF00994 Probable molybdopterin binding domain Q31a_23720 PF18146 Damage-inducible protein CinA KH domain Q31a_23750 PF02687 FtsX-like permease family Q31a_23750 PF12704 MacB-like periplasmic core domain Q31a_23750 PF00005 ABC transporter Q31a_23760 PF12704 MacB-like periplasmic core domain Q31a_23760 PF02687 FtsX-like permease family Q31a_23810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Q31a_23810 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Q31a_23830 PF08281 Sigma-70, region 4 Q31a_23830 PF04542 Sigma-70 region 2 Q31a_23900 PF02817 e3 binding domain Q31a_23900 PF00364 Biotin-requiring enzyme Q31a_23900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Q31a_23910 PF16078 2-oxoglutarate dehydrogenase N-terminus Q31a_23910 PF02779 Transketolase, pyrimidine binding domain Q31a_23910 PF00676 Dehydrogenase E1 component Q31a_23910 PF16870 2-oxoglutarate dehydrogenase C-terminal Q31a_23920 PF01370 NAD dependent epimerase/dehydratase family Q31a_23930 PF12111 Polyribonucleotide phosphorylase C terminal Q31a_23930 PF00575 S1 RNA binding domain Q31a_23930 PF10150 Ribonuclease E/G family Q31a_23940 PF05524 PEP-utilising enzyme, N-terminal Q31a_23940 PF00391 PEP-utilising enzyme, mobile domain Q31a_23940 PF02896 PEP-utilising enzyme, TIM barrel domain Q31a_23950 PF00381 PTS HPr component phosphorylation site Q31a_23960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Q31a_23990 PF01938 TRAM domain Q31a_23990 PF04055 Radical SAM superfamily Q31a_23990 PF00919 Uncharacterized protein family UPF0004 Q31a_24060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Q31a_24060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Q31a_24070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_24070 PF00512 His Kinase A (phospho-acceptor) domain Q31a_24090 PF12127 SigmaW regulon antibacterial Q31a_24110 PF03976 Polyphosphate kinase 2 (PPK2) Q31a_24140 PF01367 5'-3' exonuclease, C-terminal SAM fold Q31a_24140 PF00476 DNA polymerase family A Q31a_24140 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Q31a_24160 PF00005 ABC transporter Q31a_24180 PF01625 Peptide methionine sulfoxide reductase Q31a_24200 PF13180 PDZ domain Q31a_24240 PF01522 Polysaccharide deacetylase Q31a_24240 PF00963 Cohesin domain Q31a_24280 PF10518 TAT (twin-arginine translocation) pathway signal sequence Q31a_24280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_24290 PF00175 Oxidoreductase NAD-binding domain Q31a_24290 PF00970 Oxidoreductase FAD-binding domain Q31a_24330 PF13277 YmdB-like protein Q31a_24340 PF00013 KH domain Q31a_24340 PF12072 Domain of unknown function (DUF3552) Q31a_24340 PF01966 HD domain Q31a_24380 PF00990 Diguanylate cyclase, GGDEF domain Q31a_24380 PF00563 EAL domain Q31a_24380 PF03707 Bacterial signalling protein N terminal repeat Q31a_24400 PF12794 Mechanosensitive ion channel inner membrane domain 1 Q31a_24400 PF12795 Mechanosensitive ion channel porin domain Q31a_24400 PF00924 Mechanosensitive ion channel Q31a_24410 PF01544 CorA-like Mg2+ transporter protein Q31a_24460 PF00884 Sulfatase Q31a_24480 PF01590 GAF domain Q31a_24480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_24480 PF00512 His Kinase A (phospho-acceptor) domain Q31a_24480 PF08446 PAS fold Q31a_24480 PF00360 Phytochrome region Q31a_24490 PF00072 Response regulator receiver domain Q31a_24500 PF00571 CBS domain Q31a_24500 PF00478 IMP dehydrogenase / GMP reductase domain Q31a_24570 PF00380 Ribosomal protein S9/S16 Q31a_24580 PF00572 Ribosomal protein L13 Q31a_24600 PF00005 ABC transporter Q31a_24600 PF13732 Domain of unknown function (DUF4162) Q31a_24640 PF07977 FabA-like domain Q31a_24650 PF01494 FAD binding domain Q31a_24680 PF07977 FabA-like domain Q31a_24690 PF00550 Phosphopantetheine attachment site Q31a_24700 PF07977 FabA-like domain Q31a_24710 PF02416 mttA/Hcf106 family Q31a_24720 PF02416 mttA/Hcf106 family Q31a_24730 PF00459 Inositol monophosphatase family Q31a_24740 PF00248 Aldo/keto reductase family Q31a_24920 PF00144 Beta-lactamase Q31a_24990 PF00884 Sulfatase Q31a_25000 PF00722 Glycosyl hydrolases family 16 Q31a_25000 PF02368 Bacterial Ig-like domain (group 2) Q31a_25050 PF02931 Neurotransmitter-gated ion-channel ligand binding domain Q31a_25090 PF16347 Domain of unknown function (DUF4976) Q31a_25090 PF00884 Sulfatase Q31a_25150 PF02599 Global regulator protein family Q31a_25170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Q31a_25170 PF00529 HlyD membrane-fusion protein of T1SS Q31a_25230 PF00196 Bacterial regulatory proteins, luxR family Q31a_25230 PF17874 MalT-like TPR region Q31a_25300 PF03793 PASTA domain Q31a_25300 PF00069 Protein kinase domain Q31a_25330 PF03793 PASTA domain Q31a_25330 PF00069 Protein kinase domain Q31a_25340 PF08281 Sigma-70, region 4 Q31a_25340 PF04542 Sigma-70 region 2 Q31a_25370 PF02627 Carboxymuconolactone decarboxylase family Q31a_25390 PF13533 Biotin-lipoyl like Q31a_25400 PF07690 Major Facilitator Superfamily Q31a_25410 PF16123 Hydroxyacylglutathione hydrolase C-terminus Q31a_25410 PF00753 Metallo-beta-lactamase superfamily Q31a_25430 PF00117 Glutamine amidotransferase class-I Q31a_25440 PF00425 chorismate binding enzyme Q31a_25440 PF04715 Anthranilate synthase component I, N terminal region Q31a_25460 PF13180 PDZ domain Q31a_25470 PF12849 PBP superfamily domain Q31a_25500 PF03190 Protein of unknown function, DUF255 Q31a_25510 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Q31a_25510 PF01565 FAD binding domain Q31a_25530 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Q31a_25530 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Q31a_25540 PF00158 Sigma-54 interaction domain Q31a_25540 PF01590 GAF domain Q31a_25540 PF02954 Bacterial regulatory protein, Fis family Q31a_25550 PF08281 Sigma-70, region 4 Q31a_25550 PF04542 Sigma-70 region 2 Q31a_25570 PF07678 A-macroglobulin TED domain Q31a_25570 PF07703 Alpha-2-macroglobulin bait region domain Q31a_25570 PF00207 Alpha-2-macroglobulin family Q31a_25570 PF01835 MG2 domain Q31a_25570 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain Q31a_25590 PF01116 Fructose-bisphosphate aldolase class-II Q31a_25630 PF13545 Crp-like helix-turn-helix domain Q31a_25630 PF00027 Cyclic nucleotide-binding domain Q31a_25640 PF01062 Bestrophin, RFP-TM, chloride channel Q31a_25690 PF04542 Sigma-70 region 2 Q31a_25690 PF00140 Sigma-70 factor, region 1.2 Q31a_25690 PF03979 Sigma-70 factor, region 1.1 Q31a_25690 PF04545 Sigma-70, region 4 Q31a_25690 PF04539 Sigma-70 region 3 Q31a_25700 PF00266 Aminotransferase class-V Q31a_25710 PF01594 AI-2E family transporter Q31a_25730 PF00884 Sulfatase Q31a_25740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Q31a_25740 PF00672 HAMP domain Q31a_25810 PF07859 alpha/beta hydrolase fold Q31a_25820 PF00889 Elongation factor TS Q31a_25830 PF00318 Ribosomal protein S2 Q31a_25840 PF00037 4Fe-4S binding domain Q31a_25840 PF11953 Domain of unknown function (DUF3470) Q31a_25900 PF07995 Glucose / Sorbosone dehydrogenase Q31a_25920 PF03481 Putative GTP-binding controlling metal-binding Q31a_25920 PF01300 Telomere recombination Q31a_25930 PF01121 Dephospho-CoA kinase Q31a_25960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Q31a_26020 PF00528 Binding-protein-dependent transport system inner membrane component Q31a_26030 PF00528 Binding-protein-dependent transport system inner membrane component Q31a_26040 PF00005 ABC transporter Q31a_26060 PF09397 Ftsk gamma domain Q31a_26060 PF17854 FtsK alpha domain Q31a_26060 PF01580 FtsK/SpoIIIE family Q31a_26100 PF00266 Aminotransferase class-V Q31a_26170 PF00069 Protein kinase domain Q31a_26220 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Q31a_26220 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Q31a_26250 PF13519 von Willebrand factor type A domain Q31a_26260 PF00092 von Willebrand factor type A domain Q31a_26260 PF07584 Aerotolerance regulator N-terminal Q31a_26280 PF01882 Protein of unknown function DUF58 Q31a_26290 PF17863 AAA lid domain Q31a_26290 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_26300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_26300 PF00512 His Kinase A (phospho-acceptor) domain Q31a_26300 PF08448 PAS fold Q31a_26300 PF13188 PAS domain Q31a_26300 PF00072 Response regulator receiver domain Q31a_26310 PF00326 Prolyl oligopeptidase family Q31a_26310 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Q31a_26340 PF00075 RNase H Q31a_26350 PF00128 Alpha amylase, catalytic domain Q31a_26350 PF02806 Alpha amylase, C-terminal all-beta domain Q31a_26350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Q31a_26370 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Q31a_26370 PF00756 Putative esterase Q31a_26380 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Q31a_26380 PF02770 Acyl-CoA dehydrogenase, middle domain Q31a_26380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Q31a_26390 PF09397 Ftsk gamma domain Q31a_26390 PF01580 FtsK/SpoIIIE family Q31a_26390 PF17854 FtsK alpha domain Q31a_26410 PF00575 S1 RNA binding domain Q31a_26410 PF17674 HHH domain Q31a_26410 PF09371 Tex-like protein N-terminal domain Q31a_26410 PF16921 Tex protein YqgF-like domain Q31a_26420 PF01434 Peptidase family M41 Q31a_26420 PF17862 AAA+ lid domain Q31a_26420 PF00004 ATPase family associated with various cellular activities (AAA) Q31a_26500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_26500 PF00512 His Kinase A (phospho-acceptor) domain Q31a_26500 PF08448 PAS fold Q31a_26500 PF13188 PAS domain Q31a_26500 PF00072 Response regulator receiver domain Q31a_26550 PF00202 Aminotransferase class-III Q31a_26560 PF13840 ACT domain Q31a_26560 PF01842 ACT domain Q31a_26560 PF00696 Amino acid kinase family Q31a_26570 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Q31a_26570 PF01676 Metalloenzyme superfamily Q31a_26580 PF03447 Homoserine dehydrogenase, NAD binding domain Q31a_26580 PF01842 ACT domain Q31a_26580 PF00742 Homoserine dehydrogenase Q31a_26650 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_26650 PF17863 AAA lid domain Q31a_26750 PF08264 Anticodon-binding domain of tRNA Q31a_26750 PF00133 tRNA synthetases class I (I, L, M and V) Q31a_26750 PF13603 Leucyl-tRNA synthetase, Domain 2 Q31a_26760 PF00535 Glycosyl transferase family 2 Q31a_26770 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Q31a_26780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Q31a_26780 PF00205 Thiamine pyrophosphate enzyme, central domain Q31a_26780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Q31a_26800 PF00293 NUDIX domain Q31a_26850 PF01791 DeoC/LacD family aldolase Q31a_26880 PF08244 Glycosyl hydrolases family 32 C terminal Q31a_26880 PF00251 Glycosyl hydrolases family 32 N-terminal domain Q31a_27010 PF01555 DNA methylase Q31a_27150 PF04860 Phage portal protein Q31a_27160 PF03354 Phage Terminase Q31a_27260 PF01367 5'-3' exonuclease, C-terminal SAM fold Q31a_27260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Q31a_27260 PF00476 DNA polymerase family A Q31a_27260 PF09281 Taq polymerase, exonuclease Q31a_27280 PF02899 Phage integrase, N-terminal SAM-like domain Q31a_27280 PF00589 Phage integrase family Q31a_27320 PF02599 Global regulator protein family Q31a_27390 PF02599 Global regulator protein family Q31a_27410 PF01590 GAF domain Q31a_27410 PF02954 Bacterial regulatory protein, Fis family Q31a_27410 PF00158 Sigma-54 interaction domain Q31a_27420 PF00474 Sodium:solute symporter family Q31a_27450 PF02224 Cytidylate kinase Q31a_27450 PF02569 Pantoate-beta-alanine ligase Q31a_27490 PF00196 Bacterial regulatory proteins, luxR family Q31a_27490 PF00072 Response regulator receiver domain Q31a_27510 PF00575 S1 RNA binding domain Q31a_27520 PF02502 Ribose/Galactose Isomerase Q31a_27530 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Q31a_27530 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Q31a_27540 PF00202 Aminotransferase class-III Q31a_27550 PF00696 Amino acid kinase family Q31a_27590 PF02548 Ketopantoate hydroxymethyltransferase Q31a_27620 PF01043 SecA preprotein cross-linking domain Q31a_27620 PF07517 SecA DEAD-like domain Q31a_27670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Q31a_27710 PF02080 TrkA-C domain Q31a_27710 PF03600 Citrate transporter Q31a_27720 PF01266 FAD dependent oxidoreductase Q31a_27730 PF07859 alpha/beta hydrolase fold Q31a_27740 PF02222 ATP-grasp domain Q31a_27740 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Q31a_27750 PF00731 AIR carboxylase Q31a_27760 PF01336 OB-fold nucleic acid binding domain Q31a_27760 PF00152 tRNA synthetases class II (D, K and N) Q31a_27770 PF06778 Chlorite dismutase Q31a_27790 PF02684 Lipid-A-disaccharide synthetase Q31a_27810 PF03009 Glycerophosphoryl diester phosphodiesterase family Q31a_27830 PF00186 Dihydrofolate reductase Q31a_27850 PF12833 Helix-turn-helix domain Q31a_27850 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term Q31a_27860 PF09382 RQC domain Q31a_27860 PF00271 Helicase conserved C-terminal domain Q31a_27860 PF16124 RecQ zinc-binding Q31a_27860 PF00270 DEAD/DEAH box helicase Q31a_27860 PF00570 HRDC domain Q31a_27870 PF03030 Inorganic H+ pyrophosphatase Q31a_27880 PF00916 Sulfate permease family Q31a_27880 PF01740 STAS domain Q31a_27900 PF07992 Pyridine nucleotide-disulphide oxidoreductase Q31a_27910 PF13180 PDZ domain Q31a_27920 PF00854 POT family Q31a_27930 PF01266 FAD dependent oxidoreductase Q31a_27940 PF05544 Proline racemase Q31a_27970 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Q31a_27970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_27970 PF01627 Hpt domain Q31a_27970 PF00512 His Kinase A (phospho-acceptor) domain Q31a_27970 PF00672 HAMP domain Q31a_27970 PF00072 Response regulator receiver domain Q31a_28030 PF17930 LpxI N-terminal domain Q31a_28030 PF06230 LpxI C-terminal domain Q31a_28040 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Q31a_28040 PF00132 Bacterial transferase hexapeptide (six repeats) Q31a_28050 PF02602 Uroporphyrinogen-III synthase HemD Q31a_28050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Q31a_28060 PF01649 Ribosomal protein S20 Q31a_28080 PF02223 Thymidylate kinase Q31a_28130 PF07995 Glucose / Sorbosone dehydrogenase Q31a_28140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Q31a_28160 PF16347 Domain of unknown function (DUF4976) Q31a_28160 PF00884 Sulfatase Q31a_28200 PF08281 Sigma-70, region 4 Q31a_28200 PF04542 Sigma-70 region 2 Q31a_28210 PF00135 Carboxylesterase family Q31a_28220 PF00072 Response regulator receiver domain Q31a_28220 PF02954 Bacterial regulatory protein, Fis family Q31a_28220 PF00158 Sigma-54 interaction domain Q31a_28230 PF00989 PAS fold Q31a_28230 PF00512 His Kinase A (phospho-acceptor) domain Q31a_28230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_28250 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) Q31a_28260 PF00361 Proton-conducting membrane transporter Q31a_28260 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Q31a_28270 PF00361 Proton-conducting membrane transporter Q31a_28280 PF00916 Sulfate permease family Q31a_28280 PF01740 STAS domain Q31a_28330 PF01544 CorA-like Mg2+ transporter protein Q31a_28380 PF00873 AcrB/AcrD/AcrF family Q31a_28390 PF01494 FAD binding domain Q31a_28610 PF00109 Beta-ketoacyl synthase, N-terminal domain Q31a_28610 PF02801 Beta-ketoacyl synthase, C-terminal domain Q31a_28610 PF08659 KR domain Q31a_28610 PF00550 Phosphopantetheine attachment site Q31a_28610 PF14765 Polyketide synthase dehydratase Q31a_28610 PF08240 Alcohol dehydrogenase GroES-like domain Q31a_28610 PF16197 Ketoacyl-synthetase C-terminal extension Q31a_28610 PF00698 Acyl transferase domain Q31a_28660 PF16385 Domain of unknown function Q31a_28660 PF00884 Sulfatase Q31a_28670 PF00072 Response regulator receiver domain Q31a_28670 PF00196 Bacterial regulatory proteins, luxR family Q31a_28680 PF00196 Bacterial regulatory proteins, luxR family Q31a_28680 PF00072 Response regulator receiver domain Q31a_28690 PF13493 Domain of unknown function (DUF4118) Q31a_28690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_28690 PF00512 His Kinase A (phospho-acceptor) domain Q31a_28690 PF13426 PAS domain Q31a_28690 PF00989 PAS fold Q31a_28690 PF08447 PAS fold Q31a_28710 PF01661 Macro domain Q31a_28730 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain Q31a_28730 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain Q31a_28730 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Q31a_28730 PF00884 Sulfatase Q31a_28730 PF16347 Domain of unknown function (DUF4976) Q31a_28820 PF17773 UPF0176 acylphosphatase like domain Q31a_28820 PF00581 Rhodanese-like domain Q31a_28830 PF01227 GTP cyclohydrolase I Q31a_28860 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Q31a_28860 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Q31a_28890 PF01593 Flavin containing amine oxidoreductase Q31a_28920 PF01869 BadF/BadG/BcrA/BcrD ATPase family Q31a_28930 PF13580 SIS domain Q31a_28950 PF07075 Protein of unknown function (DUF1343) Q31a_28960 PF07075 Protein of unknown function (DUF1343) Q31a_28970 PF07859 alpha/beta hydrolase fold Q31a_28980 PF16347 Domain of unknown function (DUF4976) Q31a_28980 PF00884 Sulfatase Q31a_29010 PF00589 Phage integrase family Q31a_29010 PF02899 Phage integrase, N-terminal SAM-like domain Q31a_29040 PF00583 Acetyltransferase (GNAT) family Q31a_29040 PF00795 Carbon-nitrogen hydrolase Q31a_29050 PF17810 Arginine decarboxylase helical bundle domain Q31a_29050 PF17944 Arginine decarboxylase C-terminal helical extension Q31a_29050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Q31a_29060 PF00884 Sulfatase Q31a_29060 PF16347 Domain of unknown function (DUF4976) Q31a_29080 PF00375 Sodium:dicarboxylate symporter family Q31a_29090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_29100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_29100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_29170 PF01593 Flavin containing amine oxidoreductase Q31a_29190 PF01557 Fumarylacetoacetate (FAA) hydrolase family Q31a_29200 PF01568 Molydopterin dinucleotide binding domain Q31a_29200 PF00384 Molybdopterin oxidoreductase Q31a_29210 PF02634 FdhD/NarQ family Q31a_29230 PF10005 zinc-ribbon domain Q31a_29230 PF15887 Putative zinc-binding metallo-peptidase Q31a_29240 PF06628 Catalase-related immune-responsive Q31a_29240 PF00199 Catalase Q31a_29240 PF18011 C-terminal domain found in long catalases Q31a_29250 PF05974 Domain of unknown function (DUF892) Q31a_29290 PF13183 4Fe-4S dicluster domain Q31a_29290 PF13085 2Fe-2S iron-sulfur cluster binding domain Q31a_29320 PF00067 Cytochrome P450 Q31a_29340 PF00970 Oxidoreductase FAD-binding domain Q31a_29340 PF00175 Oxidoreductase NAD-binding domain Q31a_29340 PF00042 Globin Q31a_29350 PF03595 Voltage-dependent anion channel Q31a_29370 PF00149 Calcineurin-like phosphoesterase Q31a_29390 PF13369 Transglutaminase-like superfamily Q31a_29430 PF00266 Aminotransferase class-V Q31a_29480 PF04542 Sigma-70 region 2 Q31a_29480 PF04539 Sigma-70 region 3 Q31a_29480 PF03979 Sigma-70 factor, region 1.1 Q31a_29480 PF00140 Sigma-70 factor, region 1.2 Q31a_29480 PF04545 Sigma-70, region 4 Q31a_29510 PF13476 AAA domain Q31a_29540 PF01695 IstB-like ATP binding protein Q31a_29600 PF00657 GDSL-like Lipase/Acylhydrolase Q31a_29660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_29670 PF02954 Bacterial regulatory protein, Fis family Q31a_29670 PF00072 Response regulator receiver domain Q31a_29670 PF00158 Sigma-54 interaction domain Q31a_29700 PF03965 Penicillinase repressor Q31a_29740 PF16347 Domain of unknown function (DUF4976) Q31a_29740 PF00884 Sulfatase Q31a_29790 PF04542 Sigma-70 region 2 Q31a_29790 PF08281 Sigma-70, region 4 Q31a_29830 PF04820 Tryptophan halogenase Q31a_29920 PF08241 Methyltransferase domain Q31a_29940 PF00575 S1 RNA binding domain Q31a_29940 PF17674 HHH domain Q31a_29940 PF16921 Tex protein YqgF-like domain Q31a_29940 PF09371 Tex-like protein N-terminal domain Q31a_29990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Q31a_29990 PF13360 PQQ-like domain Q31a_30020 PF03793 PASTA domain Q31a_30020 PF00069 Protein kinase domain Q31a_30050 PF07992 Pyridine nucleotide-disulphide oxidoreductase Q31a_30050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Q31a_30090 PF00543 Nitrogen regulatory protein P-II Q31a_30130 PF04055 Radical SAM superfamily Q31a_30130 PF16199 Radical_SAM C-terminal domain Q31a_30140 PF00498 FHA domain Q31a_30140 PF12773 Double zinc ribbon Q31a_30190 PF00285 Citrate synthase, C-terminal domain Q31a_30200 PF01053 Cys/Met metabolism PLP-dependent enzyme Q31a_30220 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Q31a_30240 PF04542 Sigma-70 region 2 Q31a_30240 PF08281 Sigma-70, region 4 Q31a_30260 PF00884 Sulfatase Q31a_30270 PF04539 Sigma-70 region 3 Q31a_30270 PF00140 Sigma-70 factor, region 1.2 Q31a_30270 PF03979 Sigma-70 factor, region 1.1 Q31a_30270 PF04542 Sigma-70 region 2 Q31a_30270 PF04545 Sigma-70, region 4 Q31a_30280 PF00534 Glycosyl transferases group 1 Q31a_30280 PF13439 Glycosyltransferase Family 4 Q31a_30300 PF00156 Phosphoribosyl transferase domain Q31a_30360 PF13439 Glycosyltransferase Family 4 Q31a_30400 PF02397 Bacterial sugar transferase Q31a_30440 PF00132 Bacterial transferase hexapeptide (six repeats) Q31a_30450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_30450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_30460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Q31a_30470 PF00535 Glycosyl transferase family 2 Q31a_30490 PF00884 Sulfatase Q31a_30500 PF16347 Domain of unknown function (DUF4976) Q31a_30500 PF00884 Sulfatase Q31a_30510 PF01588 Putative tRNA binding domain Q31a_30520 PF01966 HD domain Q31a_30530 PF16347 Domain of unknown function (DUF4976) Q31a_30530 PF00884 Sulfatase Q31a_30540 PF02867 Ribonucleotide reductase, barrel domain Q31a_30540 PF08471 Class II vitamin B12-dependent ribonucleotide reductase Q31a_30550 PF00271 Helicase conserved C-terminal domain Q31a_30550 PF00270 DEAD/DEAH box helicase Q31a_30590 PF01883 Iron-sulfur cluster assembly protein Q31a_30600 PF18073 Rubredoxin metal binding domain Q31a_30610 PF01048 Phosphorylase superfamily Q31a_30620 PF01048 Phosphorylase superfamily Q31a_30630 PF00248 Aldo/keto reductase family Q31a_30650 PF16363 GDP-mannose 4,6 dehydratase Q31a_30660 PF00107 Zinc-binding dehydrogenase Q31a_30660 PF08240 Alcohol dehydrogenase GroES-like domain Q31a_30690 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Q31a_30710 PF00158 Sigma-54 interaction domain Q31a_30710 PF00072 Response regulator receiver domain Q31a_30740 PF00072 Response regulator receiver domain Q31a_30750 PF08502 LeuA allosteric (dimerisation) domain Q31a_30750 PF00682 HMGL-like Q31a_30760 PF17760 UvrA interaction domain Q31a_30760 PF17755 UvrA DNA-binding domain Q31a_30760 PF00005 ABC transporter Q31a_30770 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase Q31a_30770 PF00756 Putative esterase Q31a_30830 PF00701 Dihydrodipicolinate synthetase family Q31a_30850 PF04389 Peptidase family M28 Q31a_30850 PF02225 PA domain Q31a_30870 PF00732 GMC oxidoreductase Q31a_30870 PF05199 GMC oxidoreductase Q31a_30880 PF01926 50S ribosome-binding GTPase Q31a_30880 PF06071 Protein of unknown function (DUF933) Q31a_30890 PF04055 Radical SAM superfamily Q31a_31060 PF00128 Alpha amylase, catalytic domain Q31a_31130 PF00005 ABC transporter Q31a_31140 PF13533 Biotin-lipoyl like Q31a_31150 PF01553 Acyltransferase Q31a_31150 PF13193 AMP-binding enzyme C-terminal domain Q31a_31150 PF00501 AMP-binding enzyme Q31a_31170 PF07859 alpha/beta hydrolase fold Q31a_31300 PF00311 Phosphoenolpyruvate carboxylase Q31a_31320 PF00664 ABC transporter transmembrane region Q31a_31320 PF00005 ABC transporter Q31a_31320 PF03412 Peptidase C39 family Q31a_31380 PF01553 Acyltransferase Q31a_31400 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Q31a_31410 PF01634 ATP phosphoribosyltransferase Q31a_31410 PF08029 HisG, C-terminal domain Q31a_31430 PF04026 SpoVG Q31a_31440 PF08544 GHMP kinases C terminal Q31a_31450 PF00334 Nucleoside diphosphate kinase Q31a_31470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Q31a_31480 PF12704 MacB-like periplasmic core domain Q31a_31480 PF00005 ABC transporter Q31a_31480 PF02687 FtsX-like permease family Q31a_31490 PF12704 MacB-like periplasmic core domain Q31a_31490 PF02687 FtsX-like permease family Q31a_31490 PF00005 ABC transporter Q31a_31580 PF00795 Carbon-nitrogen hydrolase Q31a_31680 PF03707 Bacterial signalling protein N terminal repeat Q31a_31680 PF00990 Diguanylate cyclase, GGDEF domain Q31a_31680 PF00563 EAL domain Q31a_31700 PF00171 Aldehyde dehydrogenase family Q31a_31800 PF00230 Major intrinsic protein Q31a_31810 PF01235 Sodium:alanine symporter family Q31a_31820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Q31a_31820 PF01261 Xylose isomerase-like TIM barrel Q31a_31830 PF14748 Pyrroline-5-carboxylate reductase dimerisation Q31a_31830 PF03807 NADP oxidoreductase coenzyme F420-dependent Q31a_31880 PF00085 Thioredoxin Q31a_31920 PF13378 Enolase C-terminal domain-like Q31a_31920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Q31a_31960 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Q31a_31960 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Q31a_31970 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Q31a_31980 PF02233 NAD(P) transhydrogenase beta subunit Q31a_32020 PF00884 Sulfatase Q31a_32070 PF00248 Aldo/keto reductase family Q31a_32120 PF01966 HD domain Q31a_32120 PF11871 Domain of unknown function (DUF3391) Q31a_32140 PF02397 Bacterial sugar transferase Q31a_32170 PF17863 AAA lid domain Q31a_32170 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_32250 PF08534 Redoxin Q31a_32270 PF00528 Binding-protein-dependent transport system inner membrane component Q31a_32280 PF00528 Binding-protein-dependent transport system inner membrane component Q31a_32290 PF00005 ABC transporter Q31a_32300 PF01209 ubiE/COQ5 methyltransferase family Q31a_32310 PF00303 Thymidylate synthase Q31a_32320 PF00186 Dihydrofolate reductase Q31a_32330 PF00749 tRNA synthetases class I (E and Q), catalytic domain Q31a_32350 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Q31a_32370 PF06421 GTP-binding protein LepA C-terminus Q31a_32370 PF03144 Elongation factor Tu domain 2 Q31a_32370 PF00679 Elongation factor G C-terminus Q31a_32370 PF00009 Elongation factor Tu GTP binding domain Q31a_32380 PF00480 ROK family Q31a_32430 PF00005 ABC transporter Q31a_32430 PF12848 ABC transporter Q31a_32540 PF03793 PASTA domain Q31a_32540 PF00069 Protein kinase domain Q31a_32550 PF04041 beta-1,4-mannooligosaccharide phosphorylase Q31a_32570 PF04041 beta-1,4-mannooligosaccharide phosphorylase Q31a_32630 PF02797 Chalcone and stilbene synthases, C-terminal domain Q31a_32630 PF00195 Chalcone and stilbene synthases, N-terminal domain Q31a_32670 PF08827 Domain of unknown function (DUF1805) Q31a_32790 PF01078 Magnesium chelatase, subunit ChlI Q31a_32790 PF13335 Magnesium chelatase, subunit ChlI C-terminal Q31a_32820 PF00550 Phosphopantetheine attachment site Q31a_32840 PF01597 Glycine cleavage H-protein Q31a_32850 PF04055 Radical SAM superfamily Q31a_32870 PF00465 Iron-containing alcohol dehydrogenase Q31a_32980 PF00510 Cytochrome c oxidase subunit III Q31a_33000 PF03831 PhnA domain Q31a_33000 PF08274 PhnA Zinc-Ribbon Q31a_33060 PF01565 FAD binding domain Q31a_33060 PF02913 FAD linked oxidases, C-terminal domain Q31a_33070 PF03169 OPT oligopeptide transporter protein Q31a_33090 PF03176 MMPL family Q31a_33100 PF03951 Glutamine synthetase, beta-Grasp domain Q31a_33100 PF00120 Glutamine synthetase, catalytic domain Q31a_33110 PF13193 AMP-binding enzyme C-terminal domain Q31a_33110 PF00501 AMP-binding enzyme Q31a_33130 PF03793 PASTA domain Q31a_33130 PF00069 Protein kinase domain Q31a_33140 PF03150 Di-haem cytochrome c peroxidase Q31a_33140 PF00034 Cytochrome c Q31a_33200 PF01119 DNA mismatch repair protein, C-terminal domain Q31a_33200 PF08676 MutL C terminal dimerisation domain Q31a_33210 PF00158 Sigma-54 interaction domain Q31a_33210 PF00072 Response regulator receiver domain Q31a_33210 PF02954 Bacterial regulatory protein, Fis family Q31a_33220 PF07736 Chorismate mutase type I Q31a_33250 PF00144 Beta-lactamase Q31a_33330 PF12679 ABC-2 family transporter protein Q31a_33340 PF00005 ABC transporter Q31a_33400 PF00884 Sulfatase Q31a_33430 PF01471 Putative peptidoglycan binding domain Q31a_33430 PF03572 Peptidase family S41 Q31a_33430 PF17820 PDZ domain Q31a_33450 PF16347 Domain of unknown function (DUF4976) Q31a_33450 PF00884 Sulfatase Q31a_33480 PF00204 DNA gyrase B Q31a_33480 PF00986 DNA gyrase B subunit, carboxyl terminus Q31a_33480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_33480 PF01751 Toprim domain Q31a_33500 PF00487 Fatty acid desaturase Q31a_33520 PF01156 Inosine-uridine preferring nucleoside hydrolase Q31a_33530 PF00591 Glycosyl transferase family, a/b domain Q31a_33530 PF02885 Glycosyl transferase family, helical bundle domain Q31a_33540 PF08032 RNA 2'-O ribose methyltransferase substrate binding Q31a_33540 PF00588 SpoU rRNA Methylase family Q31a_33550 PF00884 Sulfatase Q31a_33560 PF00571 CBS domain Q31a_33560 PF03471 Transporter associated domain Q31a_33560 PF01595 Cyclin M transmembrane N-terminal domain Q31a_33570 PF02130 Uncharacterized protein family UPF0054 Q31a_33580 PF07698 7TM receptor with intracellular HD hydrolase Q31a_33580 PF07697 7TM-HD extracellular Q31a_33580 PF01966 HD domain Q31a_33590 PF02562 PhoH-like protein Q31a_33610 PF01255 Putative undecaprenyl diphosphate synthase Q31a_33620 PF00709 Adenylosuccinate synthetase Q31a_33660 PF00072 Response regulator receiver domain Q31a_33680 PF01627 Hpt domain Q31a_33680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_33680 PF00512 His Kinase A (phospho-acceptor) domain Q31a_33680 PF00672 HAMP domain Q31a_33680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Q31a_33680 PF00072 Response regulator receiver domain Q31a_33740 PF02119 Flagellar P-ring protein Q31a_33750 PF02107 Flagellar L-ring protein Q31a_33770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Q31a_33770 PF00460 Flagella basal body rod protein Q31a_33780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Q31a_33780 PF00460 Flagella basal body rod protein Q31a_33800 PF01066 CDP-alcohol phosphatidyltransferase Q31a_33810 PF00919 Uncharacterized protein family UPF0004 Q31a_33810 PF18693 TRAM domain Q31a_33810 PF04055 Radical SAM superfamily Q31a_33860 PF00149 Calcineurin-like phosphoesterase Q31a_33870 PF13361 UvrD-like helicase C-terminal domain Q31a_33870 PF00580 UvrD/REP helicase N-terminal domain Q31a_33870 PF12705 PD-(D/E)XK nuclease superfamily Q31a_33930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_33930 PF00512 His Kinase A (phospho-acceptor) domain Q31a_33930 PF00072 Response regulator receiver domain Q31a_33930 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Q31a_33930 PF01627 Hpt domain Q31a_33930 PF00672 HAMP domain Q31a_33960 PF16385 Domain of unknown function Q31a_33960 PF00884 Sulfatase Q31a_34040 PF05496 Holliday junction DNA helicase RuvB P-loop domain Q31a_34040 PF05491 RuvB C-terminal winged helix domain Q31a_34040 PF17864 RuvB AAA lid domain Q31a_34050 PF03949 Malic enzyme, NAD binding domain Q31a_34050 PF00390 Malic enzyme, N-terminal domain Q31a_34060 PF13439 Glycosyltransferase Family 4 Q31a_34100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Q31a_34100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Q31a_34110 PF01575 MaoC like domain Q31a_34160 PF07690 Major Facilitator Superfamily Q31a_34180 PF00005 ABC transporter Q31a_34250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_34260 PF04343 Protein of unknown function, DUF488 Q31a_34270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Q31a_34270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Q31a_34320 PF00884 Sulfatase Q31a_34340 PF01112 Asparaginase Q31a_34400 PF00144 Beta-lactamase Q31a_34430 PF00884 Sulfatase Q31a_34430 PF16385 Domain of unknown function Q31a_34440 PF00884 Sulfatase Q31a_34440 PF16385 Domain of unknown function Q31a_34450 PF00701 Dihydrodipicolinate synthetase family Q31a_34460 PF13396 Phospholipase_D-nuclease N-terminal Q31a_34460 PF13091 PLD-like domain Q31a_34530 PF00989 PAS fold Q31a_34530 PF00512 His Kinase A (phospho-acceptor) domain Q31a_34530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_34540 PF00072 Response regulator receiver domain Q31a_34540 PF13188 PAS domain Q31a_34540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_34540 PF00512 His Kinase A (phospho-acceptor) domain Q31a_34540 PF08448 PAS fold Q31a_34560 PF00144 Beta-lactamase Q31a_34710 PF00144 Beta-lactamase Q31a_34720 PF01842 ACT domain Q31a_34720 PF00551 Formyl transferase Q31a_34740 PF13393 Histidyl-tRNA synthetase Q31a_34740 PF03129 Anticodon binding domain Q31a_34760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Q31a_34760 PF07498 Rho termination factor, N-terminal domain Q31a_34760 PF07497 Rho termination factor, RNA-binding domain Q31a_34870 PF00227 Proteasome subunit Q31a_34880 PF00004 ATPase family associated with various cellular activities (AAA) Q31a_34880 PF07724 AAA domain (Cdc48 subfamily) Q31a_34900 PF00512 His Kinase A (phospho-acceptor) domain Q31a_34900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_34910 PF00990 Diguanylate cyclase, GGDEF domain Q31a_34910 PF00072 Response regulator receiver domain Q31a_35010 PF00561 alpha/beta hydrolase fold Q31a_35020 PF01679 Proteolipid membrane potential modulator Q31a_35040 PF00069 Protein kinase domain Q31a_35040 PF03793 PASTA domain Q31a_35090 PF00282 Pyridoxal-dependent decarboxylase conserved domain Q31a_35110 PF00107 Zinc-binding dehydrogenase Q31a_35120 PF00403 Heavy-metal-associated domain Q31a_35120 PF07992 Pyridine nucleotide-disulphide oxidoreductase Q31a_35120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Q31a_35150 PF00884 Sulfatase Q31a_35160 PF00884 Sulfatase Q31a_35160 PF16385 Domain of unknown function Q31a_35180 PF00072 Response regulator receiver domain Q31a_35180 PF00196 Bacterial regulatory proteins, luxR family Q31a_35270 PF02653 Branched-chain amino acid transport system / permease component Q31a_35280 PF00005 ABC transporter Q31a_35300 PF13407 Periplasmic binding protein domain Q31a_35310 PF05025 RbsD / FucU transport protein family Q31a_35320 PF08240 Alcohol dehydrogenase GroES-like domain Q31a_35320 PF00107 Zinc-binding dehydrogenase Q31a_35380 PF02311 AraC-like ligand binding domain Q31a_35380 PF12833 Helix-turn-helix domain Q31a_35410 PF14537 Cytochrome c3 Q31a_35410 PF00890 FAD binding domain Q31a_35480 PF00795 Carbon-nitrogen hydrolase Q31a_35490 PF02927 Cellulase N-terminal ig-like domain Q31a_35490 PF02018 Carbohydrate binding domain Q31a_35490 PF00759 Glycosyl hydrolase family 9 Q31a_35620 PF00069 Protein kinase domain Q31a_35620 PF03793 PASTA domain Q31a_35630 PF01757 Acyltransferase family Q31a_35710 PF13509 S1 domain Q31a_35710 PF17783 CvfB-like winged helix domain Q31a_35760 PF03793 PASTA domain Q31a_35760 PF00069 Protein kinase domain Q31a_35820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Q31a_35820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Q31a_35830 PF17042 Nucleotide-binding C-terminal domain Q31a_35830 PF07005 Sugar-binding N-terminal domain Q31a_35840 PF00596 Class II Aldolase and Adducin N-terminal domain Q31a_35850 PF01261 Xylose isomerase-like TIM barrel Q31a_35870 PF03793 PASTA domain Q31a_35870 PF00069 Protein kinase domain Q31a_35960 PF08125 Mannitol dehydrogenase C-terminal domain Q31a_35960 PF01232 Mannitol dehydrogenase Rossmann domain Q31a_36160 PF08275 DNA primase catalytic core, N-terminal domain Q31a_36160 PF01807 CHC2 zinc finger Q31a_36160 PF08278 DNA primase DnaG DnaB-binding Q31a_36160 PF10410 DnaB-helicase binding domain of primase Q31a_36200 PF00004 ATPase family associated with various cellular activities (AAA) Q31a_36200 PF17862 AAA+ lid domain Q31a_36200 PF01434 Peptidase family M41 Q31a_36200 PF06480 FtsH Extracellular Q31a_36240 PF00271 Helicase conserved C-terminal domain Q31a_36240 PF00176 SNF2 family N-terminal domain Q31a_36290 PF00176 SNF2 family N-terminal domain Q31a_36290 PF00271 Helicase conserved C-terminal domain Q31a_36350 PF00271 Helicase conserved C-terminal domain Q31a_36350 PF09369 Domain of unknown function (DUF1998) Q31a_36350 PF00270 DEAD/DEAH box helicase Q31a_36430 PF00665 Integrase core domain Q31a_36460 PF00176 SNF2 family N-terminal domain Q31a_36460 PF00271 Helicase conserved C-terminal domain Q31a_36620 PF01261 Xylose isomerase-like TIM barrel Q31a_36640 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase Q31a_36640 PF02741 FTR, proximal lobe Q31a_36650 PF01812 5-formyltetrahydrofolate cyclo-ligase family Q31a_36680 PF01479 S4 domain Q31a_36680 PF00849 RNA pseudouridylate synthase Q31a_36700 PF01966 HD domain Q31a_36700 PF13286 Phosphohydrolase-associated domain Q31a_36710 PF03600 Citrate transporter Q31a_36740 PF02954 Bacterial regulatory protein, Fis family Q31a_36740 PF00158 Sigma-54 interaction domain Q31a_36740 PF00072 Response regulator receiver domain Q31a_36750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_36750 PF13188 PAS domain Q31a_36750 PF00072 Response regulator receiver domain Q31a_36750 PF08448 PAS fold Q31a_36750 PF00512 His Kinase A (phospho-acceptor) domain Q31a_36770 PF00072 Response regulator receiver domain Q31a_36770 PF00196 Bacterial regulatory proteins, luxR family Q31a_36800 PF03601 Conserved hypothetical protein 698 Q31a_36840 PF01593 Flavin containing amine oxidoreductase Q31a_36850 PF00550 Phosphopantetheine attachment site Q31a_36870 PF02780 Transketolase, C-terminal domain Q31a_36870 PF02779 Transketolase, pyrimidine binding domain Q31a_36870 PF00456 Transketolase, thiamine diphosphate binding domain Q31a_36890 PF00884 Sulfatase Q31a_36900 PF00378 Enoyl-CoA hydratase/isomerase Q31a_36910 PF01757 Acyltransferase family Q31a_37020 PF00342 Phosphoglucose isomerase Q31a_37060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Q31a_37060 PF00529 HlyD membrane-fusion protein of T1SS Q31a_37090 PF03009 Glycerophosphoryl diester phosphodiesterase family Q31a_37140 PF07683 Cobalamin synthesis protein cobW C-terminal domain Q31a_37140 PF02492 CobW/HypB/UreG, nucleotide-binding domain Q31a_37150 PF00884 Sulfatase Q31a_37150 PF16385 Domain of unknown function Q31a_37160 PF00512 His Kinase A (phospho-acceptor) domain Q31a_37160 PF00672 HAMP domain Q31a_37160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_37170 PF00072 Response regulator receiver domain Q31a_37170 PF00486 Transcriptional regulatory protein, C terminal Q31a_37190 PF00308 Bacterial dnaA protein Q31a_37190 PF08299 Bacterial dnaA protein helix-turn-helix Q31a_37190 PF11638 DnaA N-terminal domain Q31a_37210 PF00005 ABC transporter Q31a_37220 PF00528 Binding-protein-dependent transport system inner membrane component Q31a_37260 PF07690 Major Facilitator Superfamily Q31a_37280 PF07676 WD40-like Beta Propeller Repeat Q31a_37280 PF12566 Protein of unknown function (DUF3748) Q31a_37320 PF00707 Translation initiation factor IF-3, C-terminal domain Q31a_37320 PF05198 Translation initiation factor IF-3, N-terminal domain Q31a_37370 PF00069 Protein kinase domain Q31a_37400 PF00391 PEP-utilising enzyme, mobile domain Q31a_37400 PF02896 PEP-utilising enzyme, TIM barrel domain Q31a_37400 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Q31a_37420 PF00595 PDZ domain Q31a_37420 PF17804 Tail specific protease N-terminal domain Q31a_37420 PF03572 Peptidase family S41 Q31a_37420 PF11818 C-terminal domain of tail specific protease (DUF3340) Q31a_37490 PF08264 Anticodon-binding domain of tRNA Q31a_37490 PF10458 Valyl tRNA synthetase tRNA binding arm Q31a_37490 PF00133 tRNA synthetases class I (I, L, M and V) Q31a_37520 PF02371 Transposase IS116/IS110/IS902 family Q31a_37520 PF01548 Transposase Q31a_37540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Q31a_37560 PF13183 4Fe-4S dicluster domain Q31a_37560 PF13085 2Fe-2S iron-sulfur cluster binding domain Q31a_37570 PF00890 FAD binding domain Q31a_37570 PF02910 Fumarate reductase flavoprotein C-term Q31a_37580 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Q31a_37590 PF02911 Formyl transferase, C-terminal domain Q31a_37590 PF00551 Formyl transferase Q31a_37650 PF00005 ABC transporter Q31a_37670 PF09905 DNA-binding protein VF530 Q31a_37680 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family Q31a_37700 PF10127 RNA repair pathway DNA polymerase beta family Q31a_37810 PF00857 Isochorismatase family Q31a_37820 PF05726 Pirin C-terminal cupin domain Q31a_37820 PF02678 Pirin Q31a_37830 PF13859 BNR repeat-like domain Q31a_37830 PF14873 N-terminal domain of BNR-repeat neuraminidase Q31a_37840 PF02567 Phenazine biosynthesis-like protein Q31a_37870 PF01979 Amidohydrolase family Q31a_37900 PF00884 Sulfatase Q31a_37920 PF08334 Type II secretion system (T2SS), protein G Q31a_37920 PF07963 Prokaryotic N-terminal methylation motif Q31a_37930 PF01325 Iron dependent repressor, N-terminal DNA binding domain Q31a_37930 PF02742 Iron dependent repressor, metal binding and dimerisation domain Q31a_37960 PF00005 ABC transporter Q31a_37990 PF03475 3-alpha domain Q31a_37990 PF03473 MOSC domain Q31a_38050 PF00884 Sulfatase Q31a_38080 PF00884 Sulfatase Q31a_38080 PF16347 Domain of unknown function (DUF4976) Q31a_38190 PF03009 Glycerophosphoryl diester phosphodiesterase family Q31a_38280 PF02463 RecF/RecN/SMC N terminal domain Q31a_38340 PF00528 Binding-protein-dependent transport system inner membrane component Q31a_38350 PF03459 TOBE domain Q31a_38350 PF00005 ABC transporter Q31a_38380 PF00180 Isocitrate/isopropylmalate dehydrogenase Q31a_38390 PF00596 Class II Aldolase and Adducin N-terminal domain Q31a_38400 PF17042 Nucleotide-binding C-terminal domain Q31a_38400 PF07005 Sugar-binding N-terminal domain Q31a_38410 PF04199 Putative cyclase Q31a_38420 PF07690 Major Facilitator Superfamily Q31a_38440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Q31a_38440 PF03466 LysR substrate binding domain Q31a_38450 PF10282 Lactonase, 7-bladed beta-propeller Q31a_38510 PF04542 Sigma-70 region 2 Q31a_38510 PF08281 Sigma-70, region 4 Q31a_38540 PF00144 Beta-lactamase Q31a_38550 PF08281 Sigma-70, region 4 Q31a_38550 PF04542 Sigma-70 region 2 Q31a_38610 PF00884 Sulfatase Q31a_38610 PF16347 Domain of unknown function (DUF4976) Q31a_38620 PF16257 tagaturonate epimerase Q31a_38640 PF00884 Sulfatase Q31a_38690 PF00884 Sulfatase Q31a_38690 PF16347 Domain of unknown function (DUF4976) Q31a_38710 PF04542 Sigma-70 region 2 Q31a_38710 PF04545 Sigma-70, region 4 Q31a_38720 PF00069 Protein kinase domain Q31a_38720 PF03793 PASTA domain Q31a_38730 PF00884 Sulfatase Q31a_38750 PF13180 PDZ domain Q31a_38830 PF00498 FHA domain Q31a_38910 PF04539 Sigma-70 region 3 Q31a_38910 PF04542 Sigma-70 region 2 Q31a_38910 PF04545 Sigma-70, region 4 Q31a_38940 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Q31a_38950 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Q31a_38980 PF05947 Type VI secretion system, TssF Q31a_39000 PF00004 ATPase family associated with various cellular activities (AAA) Q31a_39000 PF07724 AAA domain (Cdc48 subfamily) Q31a_39000 PF17871 AAA lid domain Q31a_39000 PF10431 C-terminal, D2-small domain, of ClpB protein Q31a_39020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_39020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_39100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_39100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_39200 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase Q31a_39260 PF02447 GntP family permease Q31a_39310 PF00474 Sodium:solute symporter family Q31a_39330 PF08543 Phosphomethylpyrimidine kinase Q31a_39340 PF00440 Bacterial regulatory proteins, tetR family Q31a_39350 PF00529 HlyD membrane-fusion protein of T1SS Q31a_39350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Q31a_39360 PF00873 AcrB/AcrD/AcrF family Q31a_39430 PF04717 Type VI secretion system, phage-baseplate injector Q31a_39430 PF06715 Gp5 C-terminal repeat (3 copies) Q31a_39450 PF00595 PDZ domain Q31a_39460 PF13180 PDZ domain Q31a_39500 PF00255 Glutathione peroxidase Q31a_39550 PF03483 B3/4 domain Q31a_39550 PF03484 tRNA synthetase B5 domain Q31a_39550 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Q31a_39550 PF03147 Ferredoxin-fold anticodon binding domain Q31a_39560 PF01409 tRNA synthetases class II core domain (F) Q31a_39560 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Q31a_39570 PF00453 Ribosomal protein L20 Q31a_39580 PF01632 Ribosomal protein L35 Q31a_39670 PF00884 Sulfatase Q31a_39680 PF00294 pfkB family carbohydrate kinase Q31a_39690 PF01081 KDPG and KHG aldolase Q31a_39700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_39700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_39770 PF00005 ABC transporter Q31a_39780 PF02687 FtsX-like permease family Q31a_39820 PF05025 RbsD / FucU transport protein family Q31a_39830 PF00248 Aldo/keto reductase family Q31a_39840 PF02446 4-alpha-glucanotransferase Q31a_39850 PF00343 Carbohydrate phosphorylase Q31a_39890 PF00591 Glycosyl transferase family, a/b domain Q31a_39890 PF02885 Glycosyl transferase family, helical bundle domain Q31a_39890 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Q31a_39980 PF17210 SdrD B-like domain Q31a_39980 PF00746 LPXTG cell wall anchor motif Q31a_39980 PF04650 YSIRK type signal peptide Q31a_39980 PF17961 Bacterial Ig domain Q31a_39990 PF01571 Aminomethyltransferase folate-binding domain Q31a_40030 PF07559 Flagellar basal body protein FlaE Q31a_40030 PF00460 Flagella basal body rod protein Q31a_40030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Q31a_40040 PF00669 Bacterial flagellin N-terminal helical region Q31a_40040 PF00700 Bacterial flagellin C-terminal helical region Q31a_40110 PF00535 Glycosyl transferase family 2 Q31a_40120 PF01784 NIF3 (NGG1p interacting factor 3) Q31a_40140 PF02502 Ribose/Galactose Isomerase Q31a_40150 PF01451 Low molecular weight phosphotyrosine protein phosphatase Q31a_40200 PF08714 Formaldehyde-activating enzyme (Fae) Q31a_40210 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal Q31a_40220 PF04389 Peptidase family M28 Q31a_40220 PF04151 Bacterial pre-peptidase C-terminal domain Q31a_40240 PF00884 Sulfatase Q31a_40250 PF00884 Sulfatase Q31a_40270 PF02599 Global regulator protein family Q31a_40290 PF01738 Dienelactone hydrolase family Q31a_40400 PF00884 Sulfatase Q31a_40400 PF16385 Domain of unknown function Q31a_40430 PF02599 Global regulator protein family Q31a_40480 PF16347 Domain of unknown function (DUF4976) Q31a_40480 PF00884 Sulfatase Q31a_40500 PF03793 PASTA domain Q31a_40500 PF00069 Protein kinase domain Q31a_40510 PF04542 Sigma-70 region 2 Q31a_40510 PF08281 Sigma-70, region 4 Q31a_40550 PF03795 YCII-related domain Q31a_40560 PF03795 YCII-related domain Q31a_40600 PF04542 Sigma-70 region 2 Q31a_40600 PF08281 Sigma-70, region 4 Q31a_40630 PF09844 Uncharacterized conserved protein (COG2071) Q31a_40640 PF01370 NAD dependent epimerase/dehydratase family Q31a_40640 PF08338 Domain of unknown function (DUF1731) Q31a_40650 PF02322 Cytochrome bd terminal oxidase subunit II Q31a_40660 PF01654 Cytochrome bd terminal oxidase subunit I Q31a_40820 PF02599 Global regulator protein family Q31a_40840 PF01979 Amidohydrolase family Q31a_40850 PF13419 Haloacid dehalogenase-like hydrolase Q31a_40880 PF00873 AcrB/AcrD/AcrF family Q31a_40890 PF00529 HlyD membrane-fusion protein of T1SS Q31a_40890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Q31a_40920 PF01593 Flavin containing amine oxidoreductase Q31a_40920 PF02027 RolB/RolC glucosidase family Q31a_40930 PF07087 Protein of unknown function (DUF1353) Q31a_40960 PF00069 Protein kinase domain Q31a_41100 PF10990 Protein of unknown function (DUF2809) Q31a_41150 PF03793 PASTA domain Q31a_41150 PF00069 Protein kinase domain Q31a_41230 PF02627 Carboxymuconolactone decarboxylase family Q31a_41300 PF00884 Sulfatase Q31a_41380 PF00295 Glycosyl hydrolases family 28 Q31a_41390 PF07859 alpha/beta hydrolase fold Q31a_41400 PF16385 Domain of unknown function Q31a_41400 PF00884 Sulfatase Q31a_41410 PF00884 Sulfatase Q31a_41430 PF00884 Sulfatase Q31a_41440 PF00884 Sulfatase Q31a_41440 PF16385 Domain of unknown function Q31a_41450 PF16385 Domain of unknown function Q31a_41450 PF00884 Sulfatase Q31a_41470 PF00665 Integrase core domain Q31a_41550 PF01965 DJ-1/PfpI family Q31a_41580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Q31a_41580 PF10414 Sirohaem synthase dimerisation region Q31a_41580 PF14824 Sirohaem biosynthesis protein central Q31a_41610 PF00072 Response regulator receiver domain Q31a_41610 PF00196 Bacterial regulatory proteins, luxR family Q31a_41730 PF09308 LuxQ, periplasmic Q31a_41730 PF00512 His Kinase A (phospho-acceptor) domain Q31a_41730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_41730 PF00072 Response regulator receiver domain Q31a_42140 PF02796 Helix-turn-helix domain of resolvase Q31a_42140 PF00239 Resolvase, N terminal domain Q31a_42220 PF00004 ATPase family associated with various cellular activities (AAA) Q31a_42360 PF03143 Elongation factor Tu C-terminal domain Q31a_42360 PF03144 Elongation factor Tu domain 2 Q31a_42360 PF00009 Elongation factor Tu GTP binding domain Q31a_42960 PF00578 AhpC/TSA family Q31a_42980 PF11954 Domain of unknown function (DUF3471) Q31a_42980 PF00144 Beta-lactamase Q31a_43000 PF00578 AhpC/TSA family Q31a_43030 PF01348 Type II intron maturase Q31a_43030 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Q31a_43200 PF18755 Restriction Enzyme Adenine Methylase Associated Q31a_43200 PF01555 DNA methylase Q31a_43310 PF00239 Resolvase, N terminal domain Q31a_43310 PF02796 Helix-turn-helix domain of resolvase Q31a_43410 PF00394 Multicopper oxidase Q31a_43410 PF07731 Multicopper oxidase Q31a_43410 PF10518 TAT (twin-arginine translocation) pathway signal sequence Q31a_43410 PF07732 Multicopper oxidase Q31a_43420 PF02583 Metal-sensitive transcriptional repressor Q31a_43470 PF00873 AcrB/AcrD/AcrF family Q31a_43490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Q31a_43520 PF04542 Sigma-70 region 2 Q31a_43520 PF08281 Sigma-70, region 4 Q31a_43560 PF00873 AcrB/AcrD/AcrF family Q31a_43610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Q31a_43620 PF00873 AcrB/AcrD/AcrF family Q31a_43640 PF00085 Thioredoxin Q31a_43650 PF00403 Heavy-metal-associated domain Q31a_43710 PF02321 Outer membrane efflux protein Q31a_43750 PF00873 AcrB/AcrD/AcrF family Q31a_43780 PF00403 Heavy-metal-associated domain Q31a_43810 PF00403 Heavy-metal-associated domain Q31a_43840 PF00376 MerR family regulatory protein Q31a_43840 PF09278 MerR, DNA binding Q31a_43890 PF00873 AcrB/AcrD/AcrF family Q31a_43900 PF04945 YHS domain Q31a_43950 PF00069 Protein kinase domain Q31a_43950 PF03793 PASTA domain Q31a_44030 PF00589 Phage integrase family Q31a_44030 PF02899 Phage integrase, N-terminal SAM-like domain Q31a_44100 PF13676 TIR domain Q31a_44120 PF02384 N-6 DNA Methylase Q31a_44120 PF12161 HsdM N-terminal domain Q31a_44140 PF06250 YhcG PDDEXK nuclease domain Q31a_44140 PF17761 DUF1016 N-terminal domain Q31a_44150 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Q31a_44150 PF18766 SWI2/SNF2 ATPase Q31a_44150 PF11867 Domain of unknown function (DUF3387) Q31a_44210 PF00248 Aldo/keto reductase family Q31a_44290 PF00004 ATPase family associated with various cellular activities (AAA) Q31a_44290 PF16450 Proteasomal ATPase OB C-terminal domain Q31a_44290 PF17758 Proteasomal ATPase OB N-terminal domain Q31a_44350 PF13614 AAA domain Q31a_44360 PF17762 HTH domain found in ParB protein Q31a_44360 PF02195 ParB-like nuclease domain Q31a_44380 PF00266 Aminotransferase class-V Q31a_44420 PF00069 Protein kinase domain Q31a_44420 PF03793 PASTA domain Q31a_44640 PF01432 Peptidase family M3 Q31a_44640 PF08439 Oligopeptidase F Q31a_44660 PF01738 Dienelactone hydrolase family Q31a_44670 PF02386 Cation transport protein Q31a_44710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_44770 PF01979 Amidohydrolase family Q31a_44780 PF04542 Sigma-70 region 2 Q31a_44780 PF08281 Sigma-70, region 4 Q31a_44790 PF03793 PASTA domain Q31a_44790 PF00069 Protein kinase domain Q31a_44800 PF02954 Bacterial regulatory protein, Fis family Q31a_44800 PF00072 Response regulator receiver domain Q31a_44800 PF00158 Sigma-54 interaction domain Q31a_44820 PF10369 Small subunit of acetolactate synthase Q31a_44830 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Q31a_44830 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Q31a_44840 PF17755 UvrA DNA-binding domain Q31a_44840 PF00005 ABC transporter Q31a_44840 PF17760 UvrA interaction domain Q31a_44890 PF01432 Peptidase family M3 Q31a_44940 PF02350 UDP-N-acetylglucosamine 2-epimerase Q31a_44950 PF13614 AAA domain Q31a_44960 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Q31a_44960 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Q31a_44960 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Q31a_44970 PF01370 NAD dependent epimerase/dehydratase family Q31a_44980 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Q31a_44990 PF00132 Bacterial transferase hexapeptide (six repeats) Q31a_45010 PF00132 Bacterial transferase hexapeptide (six repeats) Q31a_45010 PF12464 Maltose acetyltransferase Q31a_45020 PF02350 UDP-N-acetylglucosamine 2-epimerase Q31a_45080 PF00534 Glycosyl transferases group 1 Q31a_45080 PF13439 Glycosyltransferase Family 4 Q31a_45090 PF00550 Phosphopantetheine attachment site Q31a_45100 PF00501 AMP-binding enzyme Q31a_45100 PF13193 AMP-binding enzyme C-terminal domain Q31a_45130 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Q31a_45150 PF02719 Polysaccharide biosynthesis protein Q31a_45160 PF02397 Bacterial sugar transferase Q31a_45190 PF16363 GDP-mannose 4,6 dehydratase Q31a_45260 PF04542 Sigma-70 region 2 Q31a_45260 PF08281 Sigma-70, region 4 Q31a_45320 PF17863 AAA lid domain Q31a_45320 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_45360 PF00484 Carbonic anhydrase Q31a_45380 PF01728 FtsJ-like methyltransferase Q31a_45390 PF01063 Amino-transferase class IV Q31a_45420 PF03989 DNA gyrase C-terminal domain, beta-propeller Q31a_45420 PF00521 DNA gyrase/topoisomerase IV, subunit A Q31a_45430 PF00986 DNA gyrase B subunit, carboxyl terminus Q31a_45430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_45430 PF01751 Toprim domain Q31a_45430 PF00204 DNA gyrase B Q31a_45440 PF00196 Bacterial regulatory proteins, luxR family Q31a_45440 PF00072 Response regulator receiver domain Q31a_45470 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_45470 PF17863 AAA lid domain Q31a_45490 PF02585 GlcNAc-PI de-N-acetylase Q31a_45510 PF03006 Haemolysin-III related Q31a_45530 PF10672 S-adenosylmethionine-dependent methyltransferase Q31a_45530 PF17785 PUA-like domain Q31a_45560 PF00293 NUDIX domain Q31a_45570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Q31a_45570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Q31a_45590 PF01507 Phosphoadenosine phosphosulfate reductase family Q31a_45610 PF00586 AIR synthase related protein, N-terminal domain Q31a_45610 PF02769 AIR synthase related protein, C-terminal domain Q31a_45620 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Q31a_45630 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Q31a_45650 PF09382 RQC domain Q31a_45650 PF16124 RecQ zinc-binding Q31a_45650 PF00570 HRDC domain Q31a_45650 PF00271 Helicase conserved C-terminal domain Q31a_45650 PF00270 DEAD/DEAH box helicase Q31a_45660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Q31a_45670 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Q31a_45670 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Q31a_45670 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Q31a_45680 PF00162 Phosphoglycerate kinase Q31a_45690 PF00356 Bacterial regulatory proteins, lacI family Q31a_45710 PF00294 pfkB family carbohydrate kinase Q31a_45720 PF13407 Periplasmic binding protein domain Q31a_45730 PF00005 ABC transporter Q31a_45740 PF02653 Branched-chain amino acid transport system / permease component Q31a_45770 PF01568 Molydopterin dinucleotide binding domain Q31a_45770 PF00384 Molybdopterin oxidoreductase Q31a_45770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Q31a_45800 PF00037 4Fe-4S binding domain Q31a_45800 PF13247 4Fe-4S dicluster domain Q31a_45850 PF00884 Sulfatase Q31a_45860 PF00005 ABC transporter Q31a_45870 PF02653 Branched-chain amino acid transport system / permease component Q31a_45900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_45900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_45920 PF01612 3'-5' exonuclease Q31a_45920 PF00570 HRDC domain Q31a_46060 PF07687 Peptidase dimerisation domain Q31a_46060 PF01546 Peptidase family M20/M25/M40 Q31a_46100 PF01242 6-pyruvoyl tetrahydropterin synthase Q31a_46110 PF03819 MazG nucleotide pyrophosphohydrolase domain Q31a_46130 PF04545 Sigma-70, region 4 Q31a_46130 PF04539 Sigma-70 region 3 Q31a_46130 PF00140 Sigma-70 factor, region 1.2 Q31a_46130 PF04542 Sigma-70 region 2 Q31a_46140 PF08338 Domain of unknown function (DUF1731) Q31a_46140 PF01370 NAD dependent epimerase/dehydratase family Q31a_46150 PF00768 D-alanyl-D-alanine carboxypeptidase Q31a_46150 PF07943 Penicillin-binding protein 5, C-terminal domain Q31a_46170 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Q31a_46180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_46180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_46210 PF00730 HhH-GPD superfamily base excision DNA repair protein Q31a_46210 PF14815 NUDIX domain Q31a_46250 PF02261 Aspartate decarboxylase Q31a_46340 PF01979 Amidohydrolase family Q31a_46350 PF00884 Sulfatase Q31a_46380 PF00072 Response regulator receiver domain Q31a_46380 PF00158 Sigma-54 interaction domain Q31a_46380 PF02954 Bacterial regulatory protein, Fis family Q31a_46390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_46430 PF00085 Thioredoxin Q31a_46460 PF00675 Insulinase (Peptidase family M16) Q31a_46460 PF05193 Peptidase M16 inactive domain Q31a_46480 PF00069 Protein kinase domain Q31a_46480 PF03793 PASTA domain Q31a_46500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_46500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_46530 PF03971 Monomeric isocitrate dehydrogenase Q31a_46570 PF00355 Rieske [2Fe-2S] domain Q31a_46580 PF01458 Uncharacterized protein family (UPF0051) Q31a_46590 PF01458 Uncharacterized protein family (UPF0051) Q31a_46600 PF00005 ABC transporter Q31a_46660 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Q31a_46660 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Q31a_46670 PF01008 Initiation factor 2 subunit family Q31a_46690 PF00857 Isochorismatase family Q31a_46710 PF00884 Sulfatase Q31a_46710 PF16385 Domain of unknown function Q31a_46720 PF07995 Glucose / Sorbosone dehydrogenase Q31a_46760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Q31a_46760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Q31a_46770 PF13537 Glutamine amidotransferase domain Q31a_46770 PF00733 Asparagine synthase Q31a_46780 PF00884 Sulfatase Q31a_46780 PF16385 Domain of unknown function Q31a_46790 PF00106 short chain dehydrogenase Q31a_46800 PF01761 3-dehydroquinate synthase Q31a_46830 PF00814 Glycoprotease family Q31a_46920 PF14437 MafB19-like deaminase Q31a_46950 PF09115 DNA polymerase III, delta subunit, C terminal Q31a_46960 PF03279 Bacterial lipid A biosynthesis acyltransferase Q31a_46970 PF02585 GlcNAc-PI de-N-acetylase Q31a_46970 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Q31a_47010 PF01618 MotA/TolQ/ExbB proton channel family Q31a_47070 PF00005 ABC transporter Q31a_47080 PF03167 Uracil DNA glycosylase superfamily Q31a_47090 PF01926 50S ribosome-binding GTPase Q31a_47090 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Q31a_47100 PF01965 DJ-1/PfpI family Q31a_47120 PF00589 Phage integrase family Q31a_47120 PF02899 Phage integrase, N-terminal SAM-like domain Q31a_47440 PF00069 Protein kinase domain Q31a_47440 PF03793 PASTA domain Q31a_47490 PF01022 Bacterial regulatory protein, arsR family Q31a_47660 PF13419 Haloacid dehalogenase-like hydrolase Q31a_47670 PF03449 Transcription elongation factor, N-terminal Q31a_47670 PF01272 Transcription elongation factor, GreA/GreB, C-term Q31a_47690 PF01180 Dihydroorotate dehydrogenase Q31a_47710 PF04717 Type VI secretion system, phage-baseplate injector Q31a_47710 PF06715 Gp5 C-terminal repeat (3 copies) Q31a_47740 PF03527 RHS protein Q31a_47780 PF13847 Methyltransferase domain Q31a_47780 PF10119 Predicted methyltransferase regulatory domain Q31a_47920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_47920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_47970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_47970 PF13426 PAS domain Q31a_47970 PF00072 Response regulator receiver domain Q31a_48050 PF11066 Protein of unknown function (DUF2867) Q31a_48050 PF13460 NAD(P)H-binding Q31a_48060 PF01593 Flavin containing amine oxidoreductase Q31a_48060 PF02027 RolB/RolC glucosidase family Q31a_48090 PF00128 Alpha amylase, catalytic domain Q31a_48100 PF00534 Glycosyl transferases group 1 Q31a_48100 PF00862 Sucrose synthase Q31a_48110 PF00231 ATP synthase Q31a_48120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Q31a_48120 PF00306 ATP synthase alpha/beta chain, C terminal domain Q31a_48120 PF02874 ATP synthase alpha/beta family, beta-barrel domain Q31a_48130 PF00430 ATP synthase B/B' CF(0) Q31a_48130 PF11154 Protein of unknown function (DUF2934) Q31a_48140 PF00137 ATP synthase subunit C Q31a_48150 PF00119 ATP synthase A chain Q31a_48200 PF02874 ATP synthase alpha/beta family, beta-barrel domain Q31a_48200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Q31a_48220 PF01965 DJ-1/PfpI family Q31a_48260 PF00403 Heavy-metal-associated domain Q31a_48300 PF11897 Protein of unknown function (DUF3417) Q31a_48300 PF00343 Carbohydrate phosphorylase Q31a_48310 PF00871 Acetokinase family Q31a_48320 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Q31a_48320 PF09363 XFP C-terminal domain Q31a_48320 PF09364 XFP N-terminal domain Q31a_48330 PF00300 Histidine phosphatase superfamily (branch 1) Q31a_48340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Q31a_48350 PF00005 ABC transporter Q31a_48360 PF00128 Alpha amylase, catalytic domain Q31a_48360 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Q31a_48370 PF16884 N-terminal domain of oxidoreductase Q31a_48370 PF00107 Zinc-binding dehydrogenase Q31a_48380 PF01180 Dihydroorotate dehydrogenase Q31a_48400 PF00158 Sigma-54 interaction domain Q31a_48400 PF00072 Response regulator receiver domain Q31a_48400 PF02954 Bacterial regulatory protein, Fis family Q31a_48410 PF00989 PAS fold Q31a_48410 PF00512 His Kinase A (phospho-acceptor) domain Q31a_48410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_48420 PF00158 Sigma-54 interaction domain Q31a_48420 PF00072 Response regulator receiver domain Q31a_48420 PF02954 Bacterial regulatory protein, Fis family Q31a_48430 PF00989 PAS fold Q31a_48430 PF00512 His Kinase A (phospho-acceptor) domain Q31a_48430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_48440 PF00512 His Kinase A (phospho-acceptor) domain Q31a_48440 PF00989 PAS fold Q31a_48440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_48500 PF00581 Rhodanese-like domain Q31a_48500 PF11127 Protein of unknown function (DUF2892) Q31a_48510 PF01925 Sulfite exporter TauE/SafE Q31a_48520 PF16123 Hydroxyacylglutathione hydrolase C-terminus Q31a_48520 PF00753 Metallo-beta-lactamase superfamily Q31a_48540 PF00034 Cytochrome c Q31a_48540 PF03150 Di-haem cytochrome c peroxidase Q31a_48560 PF00210 Ferritin-like domain Q31a_48570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Q31a_48590 PF12704 MacB-like periplasmic core domain Q31a_48590 PF00005 ABC transporter Q31a_48590 PF02687 FtsX-like permease family Q31a_48650 PF18719 ArlS sensor domain Q31a_48650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_48650 PF00512 His Kinase A (phospho-acceptor) domain Q31a_48660 PF00486 Transcriptional regulatory protein, C terminal Q31a_48660 PF00072 Response regulator receiver domain Q31a_48690 PF00582 Universal stress protein family Q31a_48700 PF02690 Na+/Pi-cotransporter Q31a_48740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Q31a_48740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Q31a_48750 PF03705 CheR methyltransferase, all-alpha domain Q31a_48750 PF01739 CheR methyltransferase, SAM binding domain Q31a_48750 PF01339 CheB methylesterase Q31a_48750 PF08448 PAS fold Q31a_48760 PF01739 CheR methyltransferase, SAM binding domain Q31a_48760 PF08448 PAS fold Q31a_48760 PF03705 CheR methyltransferase, all-alpha domain Q31a_48760 PF01339 CheB methylesterase Q31a_48770 PF03631 Virulence factor BrkB Q31a_48780 PF00012 Hsp70 protein Q31a_48800 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Q31a_48800 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Q31a_48810 PF03793 PASTA domain Q31a_48810 PF00069 Protein kinase domain Q31a_48850 PF05191 Adenylate kinase, active site lid Q31a_48930 PF04143 Sulphur transport Q31a_48940 PF00581 Rhodanese-like domain Q31a_48940 PF00753 Metallo-beta-lactamase superfamily Q31a_48990 PF05974 Domain of unknown function (DUF892) Q31a_49000 PF00484 Carbonic anhydrase Q31a_49010 PF01062 Bestrophin, RFP-TM, chloride channel Q31a_49030 PF00171 Aldehyde dehydrogenase family Q31a_49040 PF00106 short chain dehydrogenase Q31a_49120 PF00884 Sulfatase Q31a_49180 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Q31a_49180 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Q31a_49230 PF16347 Domain of unknown function (DUF4976) Q31a_49230 PF00884 Sulfatase Q31a_49280 PF00583 Acetyltransferase (GNAT) family Q31a_49290 PF08032 RNA 2'-O ribose methyltransferase substrate binding Q31a_49290 PF00588 SpoU rRNA Methylase family Q31a_49320 PF00266 Aminotransferase class-V Q31a_49330 PF01467 Cytidylyltransferase-like Q31a_49340 PF00202 Aminotransferase class-III Q31a_49370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Q31a_49370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Q31a_49370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Q31a_49380 PF16363 GDP-mannose 4,6 dehydratase Q31a_49390 PF01370 NAD dependent epimerase/dehydratase family Q31a_49420 PF00953 Glycosyl transferase family 4 Q31a_49430 PF03009 Glycerophosphoryl diester phosphodiesterase family Q31a_49440 PF01645 Conserved region in glutamate synthase Q31a_49470 PF00106 short chain dehydrogenase Q31a_49500 PF10417 C-terminal domain of 1-Cys peroxiredoxin Q31a_49500 PF00578 AhpC/TSA family Q31a_49530 PF00027 Cyclic nucleotide-binding domain Q31a_49530 PF00520 Ion transport protein Q31a_49570 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase Q31a_49590 PF16360 GTP-binding GTPase Middle Region Q31a_49590 PF13167 GTP-binding GTPase N-terminal Q31a_49590 PF01926 50S ribosome-binding GTPase Q31a_49610 PF00488 MutS domain V Q31a_49610 PF05192 MutS domain III Q31a_49610 PF05188 MutS domain II Q31a_49610 PF01624 MutS domain I Q31a_49610 PF05190 MutS family domain IV Q31a_49640 PF00534 Glycosyl transferases group 1 Q31a_49650 PF00069 Protein kinase domain Q31a_49650 PF03793 PASTA domain Q31a_49660 PF00113 Enolase, C-terminal TIM barrel domain Q31a_49660 PF03952 Enolase, N-terminal domain Q31a_49670 PF00677 Lumazine binding domain Q31a_49680 PF00398 Ribosomal RNA adenine dimethylase Q31a_49690 PF03793 PASTA domain Q31a_49690 PF00069 Protein kinase domain Q31a_49700 PF00800 Prephenate dehydratase Q31a_49700 PF01817 Chorismate mutase type II Q31a_49700 PF01842 ACT domain Q31a_49710 PF00012 Hsp70 protein Q31a_49720 PF10431 C-terminal, D2-small domain, of ClpB protein Q31a_49720 PF17871 AAA lid domain Q31a_49720 PF00004 ATPase family associated with various cellular activities (AAA) Q31a_49720 PF07724 AAA domain (Cdc48 subfamily) Q31a_49720 PF02861 Clp amino terminal domain, pathogenicity island component Q31a_49740 PF01795 MraW methylase family Q31a_49750 PF02381 MraZ protein, putative antitoxin-like Q31a_49760 PF02119 Flagellar P-ring protein Q31a_49770 PF06470 SMC proteins Flexible Hinge Domain Q31a_49770 PF02463 RecF/RecN/SMC N terminal domain Q31a_49790 PF00266 Aminotransferase class-V Q31a_49800 PF06463 Molybdenum Cofactor Synthesis C Q31a_49800 PF04055 Radical SAM superfamily Q31a_49810 PF02391 MoaE protein Q31a_49830 PF02913 FAD linked oxidases, C-terminal domain Q31a_49830 PF01565 FAD binding domain Q31a_49850 PF00578 AhpC/TSA family Q31a_49920 PF01743 Poly A polymerase head domain Q31a_49920 PF12627 Probable RNA and SrmB- binding site of polymerase A Q31a_49920 PF13735 tRNA nucleotidyltransferase domain 2 putative Q31a_49950 PF03477 ATP cone domain Q31a_49960 PF00348 Polyprenyl synthetase Q31a_49970 PF01967 MoaC family Q31a_50020 PF00005 ABC transporter Q31a_50020 PF00664 ABC transporter transmembrane region Q31a_50040 PF13649 Methyltransferase domain Q31a_50050 PF00535 Glycosyl transferase family 2 Q31a_50090 PF00072 Response regulator receiver domain Q31a_50090 PF00196 Bacterial regulatory proteins, luxR family Q31a_50100 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Q31a_50100 PF00072 Response regulator receiver domain Q31a_50100 PF01627 Hpt domain Q31a_50100 PF00512 His Kinase A (phospho-acceptor) domain Q31a_50100 PF00672 HAMP domain Q31a_50100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_50110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Q31a_50110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Q31a_50110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Q31a_50110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Q31a_50120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Q31a_50120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Q31a_50120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Q31a_50120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Q31a_50250 PF00263 Bacterial type II and III secretion system protein Q31a_50250 PF03958 Bacterial type II/III secretion system short domain Q31a_50270 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Q31a_50300 PF01725 Ham1 family Q31a_50340 PF03477 ATP cone domain Q31a_50440 PF13180 PDZ domain Q31a_50440 PF17820 PDZ domain Q31a_50460 PF13180 PDZ domain Q31a_50460 PF17820 PDZ domain Q31a_50510 PF00158 Sigma-54 interaction domain Q31a_50510 PF02954 Bacterial regulatory protein, Fis family Q31a_50510 PF00072 Response regulator receiver domain Q31a_50520 PF00512 His Kinase A (phospho-acceptor) domain Q31a_50520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_50520 PF00989 PAS fold Q31a_50530 PF06965 Na+/H+ antiporter 1 Q31a_50540 PF14760 Rnk N-terminus Q31a_50540 PF01272 Transcription elongation factor, GreA/GreB, C-term Q31a_50570 PF00916 Sulfate permease family Q31a_50570 PF01740 STAS domain Q31a_50580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_50580 PF00512 His Kinase A (phospho-acceptor) domain Q31a_50590 PF00072 Response regulator receiver domain Q31a_50590 PF00158 Sigma-54 interaction domain Q31a_50590 PF02954 Bacterial regulatory protein, Fis family Q31a_50630 PF00484 Carbonic anhydrase Q31a_50670 PF07992 Pyridine nucleotide-disulphide oxidoreductase Q31a_50670 PF13247 4Fe-4S dicluster domain Q31a_50670 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Q31a_50720 PF00474 Sodium:solute symporter family Q31a_50740 PF00266 Aminotransferase class-V Q31a_50760 PF02547 Queuosine biosynthesis protein Q31a_50770 PF00534 Glycosyl transferases group 1 Q31a_50770 PF13439 Glycosyltransferase Family 4 Q31a_50780 PF00574 Clp protease Q31a_50790 PF00574 Clp protease Q31a_50800 PF05697 Bacterial trigger factor protein (TF) Q31a_50800 PF05698 Bacterial trigger factor protein (TF) C-terminus Q31a_50830 PF03796 DnaB-like helicase C terminal domain Q31a_50830 PF00772 DnaB-like helicase N terminal domain Q31a_50840 PF00132 Bacterial transferase hexapeptide (six repeats) Q31a_50840 PF00483 Nucleotidyl transferase Q31a_50850 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Q31a_50850 PF14572 Phosphoribosyl synthetase-associated domain Q31a_50870 PF14693 Ribosomal protein TL5, C-terminal domain Q31a_50870 PF01386 Ribosomal L25p family Q31a_50880 PF01195 Peptidyl-tRNA hydrolase Q31a_50890 PF01250 Ribosomal protein S6 Q31a_50900 PF00436 Single-strand binding protein family Q31a_50910 PF01281 Ribosomal protein L9, N-terminal domain Q31a_50910 PF03948 Ribosomal protein L9, C-terminal domain Q31a_50930 PF01381 Helix-turn-helix Q31a_50970 PF02599 Global regulator protein family Q31a_50990 PF13495 Phage integrase, N-terminal SAM-like domain Q31a_50990 PF00589 Phage integrase family Q31a_51010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Q31a_51010 PF00476 DNA polymerase family A Q31a_51010 PF09281 Taq polymerase, exonuclease Q31a_51010 PF01367 5'-3' exonuclease, C-terminal SAM fold Q31a_51100 PF03354 Phage Terminase Q31a_51240 PF01555 DNA methylase Q31a_51310 PF00589 Phage integrase family Q31a_51310 PF13495 Phage integrase, N-terminal SAM-like domain Q31a_51490 PF03965 Penicillinase repressor Q31a_51510 PF01738 Dienelactone hydrolase family Q31a_51550 PF01738 Dienelactone hydrolase family Q31a_51570 PF07969 Amidohydrolase family Q31a_51590 PF01566 Natural resistance-associated macrophage protein Q31a_51650 PF03793 PASTA domain Q31a_51650 PF00069 Protein kinase domain Q31a_51710 PF07969 Amidohydrolase family Q31a_51750 PF00474 Sodium:solute symporter family Q31a_51770 PF00679 Elongation factor G C-terminus Q31a_51770 PF00009 Elongation factor Tu GTP binding domain Q31a_51770 PF06421 GTP-binding protein LepA C-terminus Q31a_51800 PF05661 Protein of unknown function (DUF808) Q31a_51900 PF02397 Bacterial sugar transferase Q31a_51920 PF00733 Asparagine synthase Q31a_51920 PF13537 Glutamine amidotransferase domain Q31a_51960 PF00534 Glycosyl transferases group 1 Q31a_51970 PF16861 Carbamoyltransferase C-terminus Q31a_51970 PF02543 Carbamoyltransferase N-terminus Q31a_51980 PF03062 MBOAT, membrane-bound O-acyltransferase family Q31a_52000 PF00534 Glycosyl transferases group 1 Q31a_52000 PF13439 Glycosyltransferase Family 4 Q31a_52020 PF09587 Bacterial capsule synthesis protein PGA_cap Q31a_52070 PF00535 Glycosyl transferase family 2 Q31a_52090 PF02350 UDP-N-acetylglucosamine 2-epimerase Q31a_52210 PF00072 Response regulator receiver domain Q31a_52210 PF00196 Bacterial regulatory proteins, luxR family Q31a_52230 PF00899 ThiF family Q31a_52260 PF02687 FtsX-like permease family Q31a_52260 PF00005 ABC transporter Q31a_52260 PF12704 MacB-like periplasmic core domain Q31a_52420 PF01261 Xylose isomerase-like TIM barrel Q31a_52440 PF08450 SMP-30/Gluconolactonase/LRE-like region Q31a_52450 PF00884 Sulfatase Q31a_52460 PF01521 Iron-sulphur cluster biosynthesis Q31a_52470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Q31a_52480 PF02585 GlcNAc-PI de-N-acetylase Q31a_52490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_52490 PF00512 His Kinase A (phospho-acceptor) domain Q31a_52490 PF00989 PAS fold Q31a_52490 PF13188 PAS domain Q31a_52490 PF13426 PAS domain Q31a_52500 PF00072 Response regulator receiver domain Q31a_52550 PF02540 NAD synthase Q31a_52590 PF00119 ATP synthase A chain Q31a_52600 PF00137 ATP synthase subunit C Q31a_52610 PF00430 ATP synthase B/B' CF(0) Q31a_52620 PF00213 ATP synthase delta (OSCP) subunit Q31a_52630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Q31a_52630 PF02874 ATP synthase alpha/beta family, beta-barrel domain Q31a_52630 PF00306 ATP synthase alpha/beta chain, C terminal domain Q31a_52640 PF00231 ATP synthase Q31a_52650 PF02874 ATP synthase alpha/beta family, beta-barrel domain Q31a_52650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Q31a_52660 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Q31a_52680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_52680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_52690 PF01653 NAD-dependent DNA ligase adenylation domain Q31a_52690 PF00533 BRCA1 C Terminus (BRCT) domain Q31a_52690 PF03120 NAD-dependent DNA ligase OB-fold domain Q31a_52690 PF12826 Helix-hairpin-helix motif Q31a_52690 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Q31a_52720 PF00708 Acylphosphatase Q31a_52740 PF01336 OB-fold nucleic acid binding domain Q31a_52740 PF00152 tRNA synthetases class II (D, K and N) Q31a_52740 PF02938 GAD domain Q31a_52760 PF05161 MOFRL family Q31a_52760 PF13660 Domain of unknown function (DUF4147) Q31a_52790 PF03793 PASTA domain Q31a_52790 PF00069 Protein kinase domain Q31a_52850 PF02599 Global regulator protein family Q31a_52870 PF09281 Taq polymerase, exonuclease Q31a_52870 PF00476 DNA polymerase family A Q31a_52870 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Q31a_52870 PF01367 5'-3' exonuclease, C-terminal SAM fold Q31a_52900 PF04542 Sigma-70 region 2 Q31a_52900 PF04545 Sigma-70, region 4 Q31a_52900 PF04539 Sigma-70 region 3 Q31a_53070 PF01555 DNA methylase Q31a_53500 PF01548 Transposase Q31a_53500 PF02371 Transposase IS116/IS110/IS902 family Q31a_53630 PF00175 Oxidoreductase NAD-binding domain Q31a_53630 PF00042 Globin Q31a_53630 PF00970 Oxidoreductase FAD-binding domain Q31a_53640 PF14622 Ribonuclease-III-like Q31a_53640 PF00035 Double-stranded RNA binding motif Q31a_53650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_53660 PF00633 Helix-hairpin-helix motif Q31a_53660 PF00730 HhH-GPD superfamily base excision DNA repair protein Q31a_53670 PF00109 Beta-ketoacyl synthase, N-terminal domain Q31a_53670 PF02801 Beta-ketoacyl synthase, C-terminal domain Q31a_53710 PF01678 Diaminopimelate epimerase Q31a_53730 PF02601 Exonuclease VII, large subunit Q31a_53730 PF13742 OB-fold nucleic acid binding domain Q31a_53760 PF08331 Domain of unknown function (DUF1730) Q31a_53770 PF00309 Sigma-54 factor, Activator interacting domain (AID) Q31a_53770 PF04552 Sigma-54, DNA binding domain Q31a_53770 PF04963 Sigma-54 factor, core binding domain Q31a_53780 PF13662 Toprim domain Q31a_53780 PF02132 RecR protein Q31a_53790 PF02575 YbaB/EbfC DNA-binding family Q31a_53800 PF12169 DNA polymerase III subunits gamma and tau domain III Q31a_53850 PF00107 Zinc-binding dehydrogenase Q31a_53850 PF08240 Alcohol dehydrogenase GroES-like domain Q31a_53860 PF00155 Aminotransferase class I and II Q31a_53880 PF01451 Low molecular weight phosphotyrosine protein phosphatase Q31a_53920 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Q31a_53950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Q31a_53960 PF00994 Probable molybdopterin binding domain Q31a_53960 PF02464 Competence-damaged protein Q31a_53960 PF18146 Damage-inducible protein CinA KH domain Q31a_54010 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Q31a_54020 PF00701 Dihydrodipicolinate synthetase family Q31a_54040 PF00593 TonB dependent receptor Q31a_54040 PF07715 TonB-dependent Receptor Plug Domain Q31a_54050 PF00571 CBS domain Q31a_54050 PF03448 MgtE intracellular N domain Q31a_54050 PF01769 Divalent cation transporter Q31a_54100 PF00578 AhpC/TSA family Q31a_54110 PF08534 Redoxin Q31a_54130 PF01709 Transcriptional regulator Q31a_54210 PF00141 Peroxidase Q31a_54250 PF02875 Mur ligase family, glutamate ligase domain Q31a_54250 PF08245 Mur ligase middle domain Q31a_54250 PF01225 Mur ligase family, catalytic domain Q31a_54280 PF00814 Glycoprotease family Q31a_54330 PF01336 OB-fold nucleic acid binding domain Q31a_54330 PF14579 Helix-hairpin-helix motif Q31a_54330 PF02811 PHP domain Q31a_54330 PF07733 Bacterial DNA polymerase III alpha NTPase domain Q31a_54330 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Q31a_54350 PF00072 Response regulator receiver domain Q31a_54350 PF00196 Bacterial regulatory proteins, luxR family Q31a_54360 PF02954 Bacterial regulatory protein, Fis family Q31a_54360 PF00072 Response regulator receiver domain Q31a_54360 PF00158 Sigma-54 interaction domain Q31a_54370 PF08442 ATP-grasp domain Q31a_54370 PF00549 CoA-ligase Q31a_54380 PF00549 CoA-ligase Q31a_54380 PF02629 CoA binding domain Q31a_54390 PF07690 Major Facilitator Superfamily Q31a_54400 PF01259 SAICAR synthetase Q31a_54440 PF00675 Insulinase (Peptidase family M16) Q31a_54440 PF05193 Peptidase M16 inactive domain Q31a_54450 PF00675 Insulinase (Peptidase family M16) Q31a_54450 PF05193 Peptidase M16 inactive domain Q31a_54470 PF01025 GrpE Q31a_54480 PF00684 DnaJ central domain Q31a_54480 PF00226 DnaJ domain Q31a_54480 PF01556 DnaJ C terminal domain Q31a_54490 PF00118 TCP-1/cpn60 chaperonin family Q31a_54500 PF00166 Chaperonin 10 Kd subunit Q31a_54510 PF00118 TCP-1/cpn60 chaperonin family Q31a_54540 PF13180 PDZ domain Q31a_54540 PF14849 YidC periplasmic domain Q31a_54540 PF02096 60Kd inner membrane protein Q31a_54550 PF03315 Serine dehydratase beta chain Q31a_54550 PF03313 Serine dehydratase alpha chain Q31a_54670 PF08003 Protein of unknown function (DUF1698) Q31a_54680 PF13649 Methyltransferase domain Q31a_54700 PF00923 Transaldolase/Fructose-6-phosphate aldolase Q31a_54710 PF00881 Nitroreductase family Q31a_54720 PF00132 Bacterial transferase hexapeptide (six repeats) Q31a_54800 PF07478 D-ala D-ala ligase C-terminus Q31a_54820 PF00107 Zinc-binding dehydrogenase Q31a_54820 PF08240 Alcohol dehydrogenase GroES-like domain Q31a_54850 PF07687 Peptidase dimerisation domain Q31a_54850 PF01546 Peptidase family M20/M25/M40 Q31a_54860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Q31a_54860 PF02403 Seryl-tRNA synthetase N-terminal domain Q31a_54920 PF13932 GidA associated domain Q31a_54920 PF01134 Glucose inhibited division protein A Q31a_54930 PF00072 Response regulator receiver domain Q31a_54930 PF00486 Transcriptional regulatory protein, C terminal Q31a_54940 PF00512 His Kinase A (phospho-acceptor) domain Q31a_54940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_54940 PF00989 PAS fold Q31a_54950 PF03553 Na+/H+ antiporter family Q31a_54970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Q31a_54970 PF00460 Flagella basal body rod protein Q31a_54980 PF02049 Flagellar hook-basal body complex protein FliE Q31a_55010 PF00771 FHIPEP family Q31a_55020 PF00448 SRP54-type protein, GTPase domain Q31a_55050 PF04542 Sigma-70 region 2 Q31a_55050 PF04539 Sigma-70 region 3 Q31a_55050 PF04545 Sigma-70, region 4 Q31a_55070 PF02108 Flagellar assembly protein FliH Q31a_55080 PF18269 T3SS EscN ATPase C-terminal domain Q31a_55080 PF02874 ATP synthase alpha/beta family, beta-barrel domain Q31a_55080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Q31a_55120 PF03963 Flagellar hook capping protein - N-terminal region Q31a_55120 PF13860 FlgD Ig-like domain Q31a_55120 PF13861 FlgD Tudor-like domain Q31a_55130 PF07559 Flagellar basal body protein FlaE Q31a_55130 PF00460 Flagella basal body rod protein Q31a_55130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Q31a_55160 PF01966 HD domain Q31a_55180 PF08281 Sigma-70, region 4 Q31a_55180 PF04542 Sigma-70 region 2 Q31a_55190 PF00873 AcrB/AcrD/AcrF family Q31a_55200 PF13533 Biotin-lipoyl like Q31a_55250 PF00005 ABC transporter Q31a_55260 PF01668 SmpB protein Q31a_55270 PF04055 Radical SAM superfamily Q31a_55310 PF01264 Chorismate synthase Q31a_55380 PF07724 AAA domain (Cdc48 subfamily) Q31a_55380 PF00004 ATPase family associated with various cellular activities (AAA) Q31a_55380 PF10431 C-terminal, D2-small domain, of ClpB protein Q31a_55380 PF02861 Clp amino terminal domain, pathogenicity island component Q31a_55380 PF17871 AAA lid domain Q31a_55430 PF00902 Sec-independent protein translocase protein (TatC) Q31a_55440 PF01238 Phosphomannose isomerase type I Q31a_55470 PF01588 Putative tRNA binding domain Q31a_55470 PF08264 Anticodon-binding domain of tRNA Q31a_55470 PF09334 tRNA synthetases class I (M) Q31a_55480 PF01245 Ribosomal protein L19 Q31a_55490 PF02021 Uncharacterised protein family UPF0102 Q31a_55500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_55500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_55520 PF01165 Ribosomal protein S21 Q31a_55560 PF00474 Sodium:solute symporter family Q31a_55570 PF13361 UvrD-like helicase C-terminal domain Q31a_55570 PF00580 UvrD/REP helicase N-terminal domain Q31a_55600 PF03099 Biotin/lipoate A/B protein ligase family Q31a_55610 PF00266 Aminotransferase class-V Q31a_55620 PF02347 Glycine cleavage system P-protein Q31a_55630 PF01597 Glycine cleavage H-protein Q31a_55640 PF01571 Aminomethyltransferase folate-binding domain Q31a_55640 PF08669 Glycine cleavage T-protein C-terminal barrel domain Q31a_55670 PF01618 MotA/TolQ/ExbB proton channel family Q31a_55680 PF02472 Biopolymer transport protein ExbD/TolR Q31a_55710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Q31a_55710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Q31a_55710 PF06827 Zinc finger found in FPG and IleRS Q31a_55720 PF01594 AI-2E family transporter Q31a_55740 PF00535 Glycosyl transferase family 2 Q31a_55760 PF03793 PASTA domain Q31a_55760 PF00069 Protein kinase domain Q31a_55780 PF01513 ATP-NAD kinase Q31a_55790 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Q31a_55790 PF02779 Transketolase, pyrimidine binding domain Q31a_55790 PF02780 Transketolase, C-terminal domain Q31a_55800 PF00348 Polyprenyl synthetase Q31a_55810 PF02609 Exonuclease VII small subunit Q31a_55830 PF03109 ABC1 family Q31a_55840 PF06508 Queuosine biosynthesis protein QueC Q31a_55870 PF11842 Domain of unknown function (DUF3362) Q31a_55870 PF08497 Radical SAM N-terminal Q31a_55870 PF04055 Radical SAM superfamily Q31a_55880 PF00107 Zinc-binding dehydrogenase Q31a_55900 PF00672 HAMP domain Q31a_55900 PF00211 Adenylate and Guanylate cyclase catalytic domain Q31a_55970 PF01183 Glycosyl hydrolases family 25 Q31a_56000 PF01546 Peptidase family M20/M25/M40 Q31a_56000 PF07687 Peptidase dimerisation domain Q31a_56020 PF08241 Methyltransferase domain Q31a_56040 PF03793 PASTA domain Q31a_56040 PF00069 Protein kinase domain Q31a_56050 PF00149 Calcineurin-like phosphoesterase Q31a_56080 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_56080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_56110 PF03466 LysR substrate binding domain Q31a_56110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Q31a_56120 PF01493 GXGXG motif Q31a_56120 PF04898 Glutamate synthase central domain Q31a_56120 PF01645 Conserved region in glutamate synthase Q31a_56120 PF00310 Glutamine amidotransferases class-II Q31a_56130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Q31a_56130 PF07992 Pyridine nucleotide-disulphide oxidoreductase Q31a_56150 PF16363 GDP-mannose 4,6 dehydratase Q31a_56160 PF00589 Phage integrase family Q31a_56160 PF02899 Phage integrase, N-terminal SAM-like domain Q31a_56190 PF01618 MotA/TolQ/ExbB proton channel family Q31a_56230 PF00069 Protein kinase domain Q31a_56230 PF03793 PASTA domain Q31a_56240 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Q31a_56240 PF00056 lactate/malate dehydrogenase, NAD binding domain Q31a_56270 PF00085 Thioredoxin Q31a_56280 PF09190 DALR domain Q31a_56280 PF01406 tRNA synthetases class I (C) catalytic domain Q31a_56290 PF02075 Crossover junction endodeoxyribonuclease RuvC Q31a_56300 PF01330 RuvA N terminal domain Q31a_56320 PF00561 alpha/beta hydrolase fold Q31a_56340 PF01556 DnaJ C terminal domain Q31a_56340 PF00226 DnaJ domain Q31a_56350 PF00825 Ribonuclease P Q31a_56360 PF08281 Sigma-70, region 4 Q31a_56360 PF04542 Sigma-70 region 2 Q31a_56450 PF13180 PDZ domain Q31a_56470 PF03781 Sulfatase-modifying factor enzyme 1 Q31a_56490 PF02397 Bacterial sugar transferase Q31a_56540 PF01809 Putative membrane protein insertion efficiency factor Q31a_56580 PF02586 SOS response associated peptidase (SRAP) Q31a_56630 PF00849 RNA pseudouridylate synthase Q31a_56650 PF02421 Ferrous iron transport protein B Q31a_56650 PF07670 Nucleoside recognition Q31a_56650 PF07664 Ferrous iron transport protein B C terminus Q31a_56690 PF00571 CBS domain Q31a_56690 PF01769 Divalent cation transporter Q31a_56690 PF03448 MgtE intracellular N domain Q31a_56700 PF00731 AIR carboxylase Q31a_56710 PF00764 Arginosuccinate synthase Q31a_56730 PF02580 D-Tyr-tRNA(Tyr) deacylase Q31a_56770 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Q31a_56780 PF00069 Protein kinase domain Q31a_56780 PF03793 PASTA domain Q31a_56790 PF03033 Glycosyltransferase family 28 N-terminal domain Q31a_56790 PF04101 Glycosyltransferase family 28 C-terminal domain Q31a_56800 PF01416 tRNA pseudouridine synthase Q31a_56810 PF02774 Semialdehyde dehydrogenase, dimerisation domain Q31a_56810 PF01118 Semialdehyde dehydrogenase, NAD binding domain Q31a_56860 PF00483 Nucleotidyl transferase Q31a_56870 PF16363 GDP-mannose 4,6 dehydratase Q31a_56970 PF13614 AAA domain Q31a_57020 PF02709 N-terminal domain of galactosyltransferase Q31a_57020 PF00535 Glycosyl transferase family 2 Q31a_57030 PF00132 Bacterial transferase hexapeptide (six repeats) Q31a_57060 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Q31a_57060 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Q31a_57060 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Q31a_57120 PF14602 Hexapeptide repeat of succinyl-transferase Q31a_57120 PF12464 Maltose acetyltransferase Q31a_57120 PF00132 Bacterial transferase hexapeptide (six repeats) Q31a_57180 PF02397 Bacterial sugar transferase Q31a_57250 PF00884 Sulfatase Q31a_57340 PF01467 Cytidylyltransferase-like Q31a_57350 PF18074 Primosomal protein N C-terminal domain Q31a_57350 PF17764 3′ DNA-binding domain (3′BD) Q31a_57350 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Q31a_57350 PF00271 Helicase conserved C-terminal domain Q31a_57350 PF04851 Type III restriction enzyme, res subunit Q31a_57380 PF00474 Sodium:solute symporter family Q31a_57410 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Q31a_57410 PF01243 Pyridoxamine 5'-phosphate oxidase Q31a_57430 PF00313 'Cold-shock' DNA-binding domain Q31a_57470 PF02472 Biopolymer transport protein ExbD/TolR Q31a_57480 PF02472 Biopolymer transport protein ExbD/TolR Q31a_57490 PF01618 MotA/TolQ/ExbB proton channel family Q31a_57540 PF02899 Phage integrase, N-terminal SAM-like domain Q31a_57540 PF00589 Phage integrase family Q31a_57560 PF00931 NB-ARC domain Q31a_57560 PF13176 Tetratricopeptide repeat Q31a_57570 PF02384 N-6 DNA Methylase Q31a_57580 PF01420 Type I restriction modification DNA specificity domain Q31a_57610 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Q31a_57620 PF11867 Domain of unknown function (DUF3387) Q31a_57620 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Q31a_57620 PF18766 SWI2/SNF2 ATPase Q31a_57650 PF00239 Resolvase, N terminal domain Q31a_57650 PF02796 Helix-turn-helix domain of resolvase Q31a_57710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_57710 PF00989 PAS fold Q31a_57710 PF16736 Single Cache-like Q31a_57710 PF00512 His Kinase A (phospho-acceptor) domain Q31a_57720 PF01895 PhoU domain Q31a_57730 PF00072 Response regulator receiver domain Q31a_57730 PF00486 Transcriptional regulatory protein, C terminal Q31a_57740 PF13439 Glycosyltransferase Family 4 Q31a_57740 PF00534 Glycosyl transferases group 1 Q31a_57770 PF08534 Redoxin Q31a_57780 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Q31a_57790 PF02272 DHHA1 domain Q31a_57790 PF01411 tRNA synthetases class II (A) Q31a_57790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Q31a_57810 PF13180 PDZ domain Q31a_57810 PF17820 PDZ domain Q31a_57820 PF00154 recA bacterial DNA recombination protein Q31a_57830 PF00886 Ribosomal protein S16 Q31a_57840 PF00448 SRP54-type protein, GTPase domain Q31a_57840 PF02881 SRP54-type protein, helical bundle domain Q31a_57840 PF02978 Signal peptide binding domain Q31a_57860 PF00543 Nitrogen regulatory protein P-II Q31a_57870 PF00909 Ammonium Transporter Family Q31a_57890 PF02881 SRP54-type protein, helical bundle domain Q31a_57890 PF00448 SRP54-type protein, GTPase domain Q31a_57910 PF00596 Class II Aldolase and Adducin N-terminal domain Q31a_57950 PF14684 Tricorn protease C1 domain Q31a_57950 PF14685 Tricorn protease PDZ domain Q31a_57950 PF07676 WD40-like Beta Propeller Repeat Q31a_57950 PF03572 Peptidase family S41 Q31a_57960 PF03079 ARD/ARD' family Q31a_58040 PF04539 Sigma-70 region 3 Q31a_58040 PF04542 Sigma-70 region 2 Q31a_58040 PF00140 Sigma-70 factor, region 1.2 Q31a_58040 PF03979 Sigma-70 factor, region 1.1 Q31a_58040 PF04545 Sigma-70, region 4 Q31a_58090 PF07733 Bacterial DNA polymerase III alpha NTPase domain Q31a_58090 PF00929 Exonuclease Q31a_58090 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Q31a_58090 PF14579 Helix-hairpin-helix motif Q31a_58090 PF11490 DNA polymerase III polC-type N-terminus II Q31a_58090 PF02811 PHP domain Q31a_58090 PF01336 OB-fold nucleic acid binding domain Q31a_58090 PF14480 DNA polymerase III polC-type N-terminus I Q31a_58140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Q31a_58140 PF02817 e3 binding domain Q31a_58140 PF00364 Biotin-requiring enzyme Q31a_58150 PF00456 Transketolase, thiamine diphosphate binding domain Q31a_58150 PF17831 Pyruvate dehydrogenase E1 component middle domain Q31a_58160 PF08240 Alcohol dehydrogenase GroES-like domain Q31a_58160 PF00107 Zinc-binding dehydrogenase Q31a_58170 PF07992 Pyridine nucleotide-disulphide oxidoreductase Q31a_58170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Q31a_58180 PF00163 Ribosomal protein S4/S9 N-terminal domain Q31a_58180 PF01479 S4 domain Q31a_58200 PF00009 Elongation factor Tu GTP binding domain Q31a_58200 PF00679 Elongation factor G C-terminus Q31a_58200 PF03144 Elongation factor Tu domain 2 Q31a_58200 PF14492 Elongation Factor G, domain II Q31a_58240 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Q31a_58240 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Q31a_58250 PF00990 Diguanylate cyclase, GGDEF domain Q31a_58250 PF08448 PAS fold Q31a_58270 PF00749 tRNA synthetases class I (E and Q), catalytic domain Q31a_58280 PF00072 Response regulator receiver domain Q31a_58280 PF00158 Sigma-54 interaction domain Q31a_58280 PF02954 Bacterial regulatory protein, Fis family Q31a_58300 PF01594 AI-2E family transporter Q31a_58330 PF00512 His Kinase A (phospho-acceptor) domain Q31a_58330 PF00072 Response regulator receiver domain Q31a_58330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_58330 PF09308 LuxQ, periplasmic Q31a_58350 PF00512 His Kinase A (phospho-acceptor) domain Q31a_58350 PF01627 Hpt domain Q31a_58350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_58350 PF00497 Bacterial extracellular solute-binding proteins, family 3 Q31a_58350 PF00072 Response regulator receiver domain Q31a_58350 PF00989 PAS fold Q31a_58360 PF07043 Protein of unknown function (DUF1328) Q31a_58410 PF05532 CsbD-like Q31a_58460 PF07724 AAA domain (Cdc48 subfamily) Q31a_58460 PF10431 C-terminal, D2-small domain, of ClpB protein Q31a_58460 PF06689 ClpX C4-type zinc finger Q31a_58520 PF00873 AcrB/AcrD/AcrF family Q31a_58530 PF00092 von Willebrand factor type A domain Q31a_58530 PF12034 Domain of unknown function (DUF3520) Q31a_58530 PF12450 von Willebrand factor Q31a_58560 PF00266 Aminotransferase class-V Q31a_58570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Q31a_58570 PF01842 ACT domain Q31a_58570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Q31a_58600 PF05496 Holliday junction DNA helicase RuvB P-loop domain Q31a_58600 PF05491 RuvB C-terminal winged helix domain Q31a_58600 PF17864 RuvB AAA lid domain Q31a_58670 PF01256 Carbohydrate kinase Q31a_58680 PF01687 Riboflavin kinase Q31a_58680 PF06574 FAD synthetase Q31a_58690 PF02272 DHHA1 domain Q31a_58690 PF01368 DHH family Q31a_58720 PF00392 Bacterial regulatory proteins, gntR family Q31a_58730 PF00005 ABC transporter Q31a_58730 PF13732 Domain of unknown function (DUF4162) Q31a_58780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Q31a_58780 PF03129 Anticodon binding domain Q31a_58790 PF17827 PrmC N-terminal domain Q31a_58790 PF05175 Methyltransferase small domain Q31a_58800 PF00472 RF-1 domain Q31a_58800 PF03462 PCRF domain Q31a_58810 PF01197 Ribosomal protein L31 Q31a_58820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Q31a_58890 PF00005 ABC transporter Q31a_58920 PF02545 Maf-like protein Q31a_58970 PF02310 B12 binding domain Q31a_58970 PF02607 B12 binding domain Q31a_58970 PF02965 Vitamin B12 dependent methionine synthase, activation domain Q31a_58970 PF00809 Pterin binding enzyme Q31a_58970 PF02574 Homocysteine S-methyltransferase Q31a_59020 PF08206 Ribonuclease B OB domain Q31a_59020 PF00773 RNB domain Q31a_59020 PF00575 S1 RNA binding domain Q31a_59020 PF17876 Cold shock domain Q31a_59040 PF00072 Response regulator receiver domain Q31a_59040 PF00486 Transcriptional regulatory protein, C terminal Q31a_59120 PF00698 Acyl transferase domain Q31a_59150 PF00550 Phosphopantetheine attachment site Q31a_59160 PF02801 Beta-ketoacyl synthase, C-terminal domain Q31a_59160 PF00109 Beta-ketoacyl synthase, N-terminal domain Q31a_59190 PF00069 Protein kinase domain Q31a_59190 PF14032 PknH-like extracellular domain Q31a_59210 PF00294 pfkB family carbohydrate kinase Q31a_59220 PF01263 Aldose 1-epimerase Q31a_59260 PF00155 Aminotransferase class I and II Q31a_59310 PF07690 Major Facilitator Superfamily Q31a_59320 PF01546 Peptidase family M20/M25/M40 Q31a_59320 PF07687 Peptidase dimerisation domain Q31a_59340 PF00291 Pyridoxal-phosphate dependent enzyme Q31a_59470 PF00571 CBS domain Q31a_59470 PF01595 Cyclin M transmembrane N-terminal domain Q31a_59470 PF03471 Transporter associated domain Q31a_59480 PF03471 Transporter associated domain Q31a_59480 PF00571 CBS domain Q31a_59480 PF01595 Cyclin M transmembrane N-terminal domain Q31a_59520 PF00011 Hsp20/alpha crystallin family Q31a_59550 PF02581 Thiamine monophosphate synthase Q31a_59550 PF17792 ThiD2 family Q31a_59610 PF14319 Transposase zinc-binding domain Q31a_59610 PF04986 Putative transposase Q31a_59620 PF02899 Phage integrase, N-terminal SAM-like domain Q31a_59620 PF00589 Phage integrase family Q31a_59730 PF03551 Transcriptional regulator PadR-like family Q31a_59750 PF01494 FAD binding domain Q31a_59760 PF00365 Phosphofructokinase Q31a_59770 PF00535 Glycosyl transferase family 2 Q31a_59790 PF13732 Domain of unknown function (DUF4162) Q31a_59790 PF00005 ABC transporter Q31a_59800 PF00717 Peptidase S24-like Q31a_59800 PF01726 LexA DNA binding domain Q31a_59810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Q31a_59820 PF00580 UvrD/REP helicase N-terminal domain Q31a_59820 PF13361 UvrD-like helicase C-terminal domain Q31a_59830 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Q31a_59830 PF01000 RNA polymerase Rpb3/RpoA insert domain Q31a_59830 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Q31a_59850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_59850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_59950 PF00749 tRNA synthetases class I (E and Q), catalytic domain Q31a_59950 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Q31a_59970 PF01112 Asparaginase Q31a_59980 PF00994 Probable molybdopterin binding domain Q31a_59980 PF03454 MoeA C-terminal region (domain IV) Q31a_59980 PF03453 MoeA N-terminal region (domain I and II) Q31a_60000 PF12804 MobA-like NTP transferase domain Q31a_60020 PF00989 PAS fold Q31a_60020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_60020 PF00512 His Kinase A (phospho-acceptor) domain Q31a_60020 PF16736 Single Cache-like Q31a_60030 PF00072 Response regulator receiver domain Q31a_60030 PF00486 Transcriptional regulatory protein, C terminal Q31a_60050 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Q31a_60060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_60060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_60070 PF03781 Sulfatase-modifying factor enzyme 1 Q31a_60130 PF01479 S4 domain Q31a_60130 PF00849 RNA pseudouridylate synthase Q31a_60140 PF00970 Oxidoreductase FAD-binding domain Q31a_60140 PF00111 2Fe-2S iron-sulfur cluster binding domain Q31a_60140 PF00175 Oxidoreductase NAD-binding domain Q31a_60160 PF00460 Flagella basal body rod protein Q31a_60190 PF01746 tRNA (Guanine-1)-methyltransferase Q31a_60200 PF02405 Permease MlaE Q31a_60210 PF00005 ABC transporter Q31a_60240 PF03951 Glutamine synthetase, beta-Grasp domain Q31a_60240 PF00120 Glutamine synthetase, catalytic domain Q31a_60260 PF02424 ApbE family Q31a_60270 PF00111 2Fe-2S iron-sulfur cluster binding domain Q31a_60270 PF00970 Oxidoreductase FAD-binding domain Q31a_60270 PF00175 Oxidoreductase NAD-binding domain Q31a_60280 PF02508 Rnf-Nqr subunit, membrane protein Q31a_60290 PF02508 Rnf-Nqr subunit, membrane protein Q31a_60300 PF04205 FMN-binding domain Q31a_60310 PF03116 NQR2, RnfD, RnfE family Q31a_60320 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) Q31a_60320 PF11973 NQRA C-terminal domain Q31a_60340 PF00884 Sulfatase Q31a_60340 PF16385 Domain of unknown function Q31a_60350 PF00270 DEAD/DEAH box helicase Q31a_60350 PF08148 DSHCT (NUC185) domain Q31a_60350 PF00271 Helicase conserved C-terminal domain Q31a_60390 PF00005 ABC transporter Q31a_60420 PF12704 MacB-like periplasmic core domain Q31a_60420 PF00005 ABC transporter Q31a_60420 PF02687 FtsX-like permease family Q31a_60460 PF02080 TrkA-C domain Q31a_60460 PF00999 Sodium/hydrogen exchanger family Q31a_60460 PF03471 Transporter associated domain Q31a_60480 PF00990 Diguanylate cyclase, GGDEF domain Q31a_60510 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Q31a_60520 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Q31a_60520 PF08666 SAF domain Q31a_60550 PF00005 ABC transporter Q31a_60550 PF17912 MalK OB fold domain Q31a_60670 PF17785 PUA-like domain Q31a_60670 PF10672 S-adenosylmethionine-dependent methyltransferase Q31a_60700 PF14841 FliG middle domain Q31a_60700 PF14842 FliG N-terminal domain Q31a_60700 PF01706 FliG C-terminal domain Q31a_60710 PF00488 MutS domain V Q31a_60710 PF05190 MutS family domain IV Q31a_60710 PF05192 MutS domain III Q31a_60710 PF05188 MutS domain II Q31a_60710 PF01624 MutS domain I Q31a_60740 PF00694 Aconitase C-terminal domain Q31a_60740 PF00330 Aconitase family (aconitate hydratase) Q31a_60820 PF13419 Haloacid dehalogenase-like hydrolase Q31a_60940 PF00459 Inositol monophosphatase family Q31a_60950 PF01252 Signal peptidase (SPase) II Q31a_60970 PF00291 Pyridoxal-phosphate dependent enzyme Q31a_61020 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family Q31a_61030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_61030 PF00512 His Kinase A (phospho-acceptor) domain Q31a_61040 PF00072 Response regulator receiver domain Q31a_61040 PF02954 Bacterial regulatory protein, Fis family Q31a_61040 PF00158 Sigma-54 interaction domain Q31a_61090 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_61090 PF17863 AAA lid domain Q31a_61130 PF00005 ABC transporter Q31a_61130 PF00664 ABC transporter transmembrane region Q31a_61140 PF04002 RadC-like JAB domain Q31a_61150 PF01113 Dihydrodipicolinate reductase, N-terminus Q31a_61150 PF05173 Dihydrodipicolinate reductase, C-terminus Q31a_61190 PF02542 YgbB family Q31a_61200 PF00005 ABC transporter Q31a_61230 PF01312 FlhB HrpN YscU SpaS Family Q31a_61240 PF01311 Bacterial export proteins, family 1 Q31a_61260 PF00813 FliP family Q31a_61280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Q31a_61300 PF13677 Membrane MotB of proton-channel complex MotA/MotB Q31a_61300 PF00691 OmpA family Q31a_61310 PF01618 MotA/TolQ/ExbB proton channel family Q31a_61320 PF06289 Flagellar and Swarming motility proteins Q31a_61340 PF03193 RsgA GTPase Q31a_61350 PF01434 Peptidase family M41 Q31a_61350 PF00004 ATPase family associated with various cellular activities (AAA) Q31a_61350 PF17862 AAA+ lid domain Q31a_61360 PF00270 DEAD/DEAH box helicase Q31a_61360 PF00271 Helicase conserved C-terminal domain Q31a_61360 PF09382 RQC domain Q31a_61360 PF00570 HRDC domain Q31a_61360 PF16124 RecQ zinc-binding Q31a_61370 PF04029 2-phosphosulpholactate phosphatase Q31a_61380 PF00290 Tryptophan synthase alpha chain Q31a_61390 PF00291 Pyridoxal-phosphate dependent enzyme Q31a_61410 PF02543 Carbamoyltransferase N-terminus Q31a_61410 PF16861 Carbamoyltransferase C-terminus Q31a_61420 PF01679 Proteolipid membrane potential modulator Q31a_61470 PF00701 Dihydrodipicolinate synthetase family Q31a_61610 PF00109 Beta-ketoacyl synthase, N-terminal domain Q31a_61610 PF02801 Beta-ketoacyl synthase, C-terminal domain Q31a_61620 PF13184 NusA-like KH domain Q31a_61620 PF08529 NusA N-terminal domain Q31a_61630 PF11987 Translation-initiation factor 2 Q31a_61630 PF04760 Translation initiation factor IF-2, N-terminal region Q31a_61630 PF00009 Elongation factor Tu GTP binding domain Q31a_61640 PF02033 Ribosome-binding factor A Q31a_61660 PF01709 Transcriptional regulator Q31a_61690 PF08502 LeuA allosteric (dimerisation) domain Q31a_61690 PF00682 HMGL-like Q31a_61710 PF02887 Pyruvate kinase, alpha/beta domain Q31a_61710 PF00224 Pyruvate kinase, barrel domain Q31a_61710 PF00391 PEP-utilising enzyme, mobile domain Q31a_61720 PF00106 short chain dehydrogenase Q31a_61730 PF16385 Domain of unknown function Q31a_61730 PF00884 Sulfatase Q31a_61740 PF01261 Xylose isomerase-like TIM barrel Q31a_61800 PF00667 FAD binding domain Q31a_61800 PF00175 Oxidoreductase NAD-binding domain Q31a_61800 PF00258 Flavodoxin Q31a_61810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Q31a_61810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Q31a_61820 PF00384 Molybdopterin oxidoreductase Q31a_61820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Q31a_61820 PF01568 Molydopterin dinucleotide binding domain Q31a_61830 PF13247 4Fe-4S dicluster domain Q31a_61840 PF00005 ABC transporter Q31a_61850 PF00005 ABC transporter Q31a_61860 PF00528 Binding-protein-dependent transport system inner membrane component Q31a_61870 PF00005 ABC transporter Q31a_61940 PF13419 Haloacid dehalogenase-like hydrolase Q31a_61960 PF01966 HD domain Q31a_61970 PF08240 Alcohol dehydrogenase GroES-like domain Q31a_61970 PF00107 Zinc-binding dehydrogenase Q31a_62050 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Q31a_62050 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Q31a_62050 PF01276 Orn/Lys/Arg decarboxylase, major domain Q31a_62090 PF13344 Haloacid dehalogenase-like hydrolase Q31a_62100 PF00884 Sulfatase Q31a_62120 PF00069 Protein kinase domain Q31a_62120 PF03793 PASTA domain Q31a_62170 PF01925 Sulfite exporter TauE/SafE Q31a_62180 PF00884 Sulfatase Q31a_62200 PF02621 Menaquinone biosynthesis Q31a_62210 PF13439 Glycosyltransferase Family 4 Q31a_62210 PF00534 Glycosyl transferases group 1 Q31a_62230 PF01475 Ferric uptake regulator family Q31a_62280 PF01923 Cobalamin adenosyltransferase Q31a_62300 PF00543 Nitrogen regulatory protein P-II Q31a_62310 PF01909 Nucleotidyltransferase domain Q31a_62310 PF08335 GlnD PII-uridylyltransferase Q31a_62310 PF01966 HD domain Q31a_62330 PF10672 S-adenosylmethionine-dependent methyltransferase Q31a_62330 PF17785 PUA-like domain Q31a_62390 PF00480 ROK family Q31a_62420 PF02503 Polyphosphate kinase middle domain Q31a_62420 PF13090 Polyphosphate kinase C-terminal domain 2 Q31a_62420 PF17941 Polyphosphate kinase C-terminal domain 1 Q31a_62420 PF13089 Polyphosphate kinase N-terminal domain Q31a_62470 PF01964 Radical SAM ThiC family Q31a_62540 PF00486 Transcriptional regulatory protein, C terminal Q31a_62540 PF00072 Response regulator receiver domain Q31a_62560 PF12002 MgsA AAA+ ATPase C terminal Q31a_62560 PF16193 AAA C-terminal domain Q31a_62560 PF00004 ATPase family associated with various cellular activities (AAA) Q31a_62570 PF00501 AMP-binding enzyme Q31a_62580 PF08443 RimK-like ATP-grasp domain Q31a_62590 PF02289 Cyclohydrolase (MCH) Q31a_62600 PF01979 Amidohydrolase family Q31a_62610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Q31a_62610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Q31a_62620 PF02401 LytB protein Q31a_62650 PF01593 Flavin containing amine oxidoreductase Q31a_62700 PF01578 Cytochrome C assembly protein Q31a_62790 PF00155 Aminotransferase class I and II Q31a_62800 PF03328 HpcH/HpaI aldolase/citrate lyase family Q31a_62820 PF00005 ABC transporter Q31a_62860 PF00069 Protein kinase domain Q31a_62860 PF03793 PASTA domain Q31a_62870 PF03781 Sulfatase-modifying factor enzyme 1 Q31a_62900 PF00884 Sulfatase Q31a_62900 PF16385 Domain of unknown function Q31a_62980 PF00355 Rieske [2Fe-2S] domain Q31a_62990 PF00342 Phosphoglucose isomerase Q31a_63030 PF01676 Metalloenzyme superfamily Q31a_63030 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Q31a_63100 PF00202 Aminotransferase class-III Q31a_63140 PF02934 GatB/GatE catalytic domain Q31a_63140 PF02637 GatB domain Q31a_63150 PF01425 Amidase Q31a_63160 PF02686 Glu-tRNAGln amidotransferase C subunit Q31a_63170 PF00830 Ribosomal L28 family Q31a_63250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_63250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_63270 PF04238 Protein of unknown function (DUF420) Q31a_63300 PF13732 Domain of unknown function (DUF4162) Q31a_63300 PF00005 ABC transporter Q31a_63330 PF01040 UbiA prenyltransferase family Q31a_63350 PF00115 Cytochrome C and Quinol oxidase polypeptide I Q31a_63380 PF12419 SNF2 Helicase protein Q31a_63380 PF00271 Helicase conserved C-terminal domain Q31a_63380 PF00176 SNF2 family N-terminal domain Q31a_63420 PF14791 DNA polymerase beta thumb Q31a_63420 PF14716 Helix-hairpin-helix domain Q31a_63420 PF02811 PHP domain Q31a_63430 PF09269 Domain of unknown function (DUF1967) Q31a_63430 PF01018 GTP1/OBG Q31a_63430 PF01926 50S ribosome-binding GTPase Q31a_63440 PF00069 Protein kinase domain Q31a_63500 PF04055 Radical SAM superfamily Q31a_63510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Q31a_63510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Q31a_63510 PF00205 Thiamine pyrophosphate enzyme, central domain Q31a_63560 PF00206 Lyase Q31a_63560 PF14698 Argininosuccinate lyase C-terminal Q31a_63580 PF02954 Bacterial regulatory protein, Fis family Q31a_63580 PF00072 Response regulator receiver domain Q31a_63580 PF00158 Sigma-54 interaction domain Q31a_63600 PF04337 Protein of unknown function, DUF480 Q31a_63630 PF00072 Response regulator receiver domain Q31a_63660 PF01189 16S rRNA methyltransferase RsmB/F Q31a_63660 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF Q31a_63660 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF Q31a_63670 PF12795 Mechanosensitive ion channel porin domain Q31a_63670 PF12794 Mechanosensitive ion channel inner membrane domain 1 Q31a_63670 PF00924 Mechanosensitive ion channel Q31a_63680 PF07992 Pyridine nucleotide-disulphide oxidoreductase Q31a_63680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Q31a_63710 PF02254 TrkA-N domain Q31a_63710 PF00999 Sodium/hydrogen exchanger family Q31a_63720 PF00795 Carbon-nitrogen hydrolase Q31a_63720 PF02540 NAD synthase Q31a_63760 PF00528 Binding-protein-dependent transport system inner membrane component Q31a_63900 PF00069 Protein kinase domain Q31a_63930 PF00005 ABC transporter Q31a_63940 PF02653 Branched-chain amino acid transport system / permease component Q31a_63970 PF01266 FAD dependent oxidoreductase Q31a_63980 PF00069 Protein kinase domain Q31a_63980 PF03793 PASTA domain Q31a_64000 PF00892 EamA-like transporter family Q31a_64020 PF00027 Cyclic nucleotide-binding domain Q31a_64020 PF00520 Ion transport protein Q31a_64040 PF01431 Peptidase family M13 Q31a_64040 PF05649 Peptidase family M13 Q31a_64060 PF02548 Ketopantoate hydroxymethyltransferase Q31a_64070 PF00884 Sulfatase Q31a_64090 PF09180 Prolyl-tRNA synthetase, C-terminal Q31a_64090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Q31a_64090 PF03129 Anticodon binding domain Q31a_64100 PF18152 DAHP synthase ferredoxin-like domain Q31a_64100 PF00793 DAHP synthetase I family Q31a_64110 PF01555 DNA methylase Q31a_64120 PF01966 HD domain Q31a_64130 PF01553 Acyltransferase Q31a_64130 PF00501 AMP-binding enzyme Q31a_64140 PF00571 CBS domain Q31a_64140 PF00005 ABC transporter Q31a_64150 PF00815 Histidinol dehydrogenase Q31a_64160 PF00155 Aminotransferase class I and II Q31a_64170 PF00475 Imidazoleglycerol-phosphate dehydratase Q31a_64190 PF00953 Glycosyl transferase family 4 Q31a_64230 PF02709 N-terminal domain of galactosyltransferase Q31a_64230 PF00535 Glycosyl transferase family 2 Q31a_64240 PF00483 Nucleotidyl transferase Q31a_64250 PF16363 GDP-mannose 4,6 dehydratase Q31a_64280 PF02844 Phosphoribosylglycinamide synthetase, N domain Q31a_64280 PF02843 Phosphoribosylglycinamide synthetase, C domain Q31a_64280 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Q31a_64290 PF03190 Protein of unknown function, DUF255 Q31a_64330 PF02673 Bacitracin resistance protein BacA Q31a_64340 PF01875 Memo-like protein Q31a_64370 PF00849 RNA pseudouridylate synthase Q31a_64370 PF01479 S4 domain Q31a_64400 PF12127 SigmaW regulon antibacterial Q31a_64420 PF00171 Aldehyde dehydrogenase family Q31a_64420 PF14850 DNA-binding domain of Proline dehydrogenase Q31a_64420 PF18327 Proline utilization A proline dehydrogenase N-terminal domain Q31a_64420 PF01619 Proline dehydrogenase Q31a_64440 PF00936 BMC domain Q31a_64450 PF10459 Peptidase S46 Q31a_64510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Q31a_64510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Q31a_64530 PF00271 Helicase conserved C-terminal domain Q31a_64530 PF00176 SNF2 family N-terminal domain Q31a_64530 PF12419 SNF2 Helicase protein Q31a_64540 PF01261 Xylose isomerase-like TIM barrel Q31a_64550 PF05721 Phytanoyl-CoA dioxygenase (PhyH) Q31a_64580 PF00384 Molybdopterin oxidoreductase Q31a_64580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Q31a_64580 PF01568 Molydopterin dinucleotide binding domain Q31a_64600 PF02348 Cytidylyltransferase Q31a_64610 PF00512 His Kinase A (phospho-acceptor) domain Q31a_64610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_64610 PF00989 PAS fold Q31a_64610 PF13188 PAS domain Q31a_64610 PF13426 PAS domain Q31a_64640 PF06418 CTP synthase N-terminus Q31a_64640 PF00117 Glutamine amidotransferase class-I Q31a_64660 PF13180 PDZ domain Q31a_64700 PF00665 Integrase core domain Q31a_64740 PF04055 Radical SAM superfamily Q31a_64740 PF06463 Molybdenum Cofactor Synthesis C Q31a_64750 PF01790 Prolipoprotein diacylglyceryl transferase Q31a_64790 PF07726 ATPase family associated with various cellular activities (AAA) Q31a_64790 PF17863 AAA lid domain Q31a_64820 PF01531 Glycosyl transferase family 11 Q31a_64830 PF00535 Glycosyl transferase family 2 Q31a_64840 PF04996 Succinylarginine dihydrolase Q31a_64850 PF04996 Succinylarginine dihydrolase Q31a_64880 PF00171 Aldehyde dehydrogenase family Q31a_64890 PF00171 Aldehyde dehydrogenase family Q31a_64900 PF00171 Aldehyde dehydrogenase family Q31a_64940 PF01263 Aldose 1-epimerase Q31a_64970 PF13180 PDZ domain Q31a_64980 PF03631 Virulence factor BrkB Q31a_65020 PF00437 Type II/IV secretion system protein Q31a_65030 PF13291 ACT domain Q31a_65030 PF02824 TGS domain Q31a_65030 PF04607 Region found in RelA / SpoT proteins Q31a_65120 PF02683 Cytochrome C biogenesis protein transmembrane region Q31a_65120 PF17991 Thioredoxin like C-terminal domain Q31a_65120 PF00578 AhpC/TSA family Q31a_65130 PF02599 Global regulator protein family Q31a_65150 PF10609 NUBPL iron-transfer P-loop NTPase Q31a_65150 PF01883 Iron-sulfur cluster assembly protein Q31a_65180 PF03958 Bacterial type II/III secretion system short domain Q31a_65180 PF00263 Bacterial type II and III secretion system protein Q31a_65230 PF00482 Type II secretion system (T2SS), protein F Q31a_65240 PF00437 Type II/IV secretion system protein Q31a_65240 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Q31a_65260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Q31a_65260 PF00512 His Kinase A (phospho-acceptor) domain Q31a_65260 PF00989 PAS fold Q31a_65260 PF16736 Single Cache-like Q31a_65270 PF00072 Response regulator receiver domain Q31a_65270 PF00486 Transcriptional regulatory protein, C terminal Q31a_65290 PF00072 Response regulator receiver domain Q31a_65300 PF01488 Shikimate / quinate 5-dehydrogenase Q31a_65300 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Q31a_65300 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Q31a_65320 PF04079 Segregation and condensation complex subunit ScpB Q31a_65340 PF00266 Aminotransferase class-V