locus-tag class description HHJ61_00005 PF08299 Bacterial dnaA protein helix-turn-helix HHJ61_00005 PF00308 Bacterial dnaA protein HHJ61_00005 PF11638 DnaA N-terminal domain HHJ61_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HHJ61_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HHJ61_00010 PF02767 DNA polymerase III beta subunit, central domain HHJ61_00015 PF02463 RecF/RecN/SMC N terminal domain HHJ61_00020 PF02592 Putative vitamin uptake transporter HHJ61_00025 PF11967 Recombination protein O N terminal HHJ61_00025 PF02565 Recombination protein O C terminal HHJ61_00030 PF05958 tRNA (Uracil-5-)-methyltransferase HHJ61_00030 PF01938 TRAM domain HHJ61_00035 PF02824 TGS domain HHJ61_00035 PF04607 Region found in RelA / SpoT proteins HHJ61_00035 PF13291 ACT domain HHJ61_00040 PF01219 Prokaryotic diacylglycerol kinase HHJ61_00045 PF17763 Glutaminase/Asparaginase C-terminal domain HHJ61_00045 PF00710 Asparaginase, N-terminal HHJ61_00055 PF02152 Dihydroneopterin aldolase HHJ61_00060 PF02660 Glycerol-3-phosphate acyltransferase HHJ61_00065 PF01327 Polypeptide deformylase HHJ61_00070 PF17358 Family of unknown function (DUF5384) HHJ61_00075 PF05433 Glycine zipper 2TM domain HHJ61_00080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HHJ61_00080 PF00205 Thiamine pyrophosphate enzyme, central domain HHJ61_00080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HHJ61_00085 PF01261 Xylose isomerase-like TIM barrel HHJ61_00090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HHJ61_00090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HHJ61_00095 PF05726 Pirin C-terminal cupin domain HHJ61_00095 PF02678 Pirin HHJ61_00100 PF03358 NADPH-dependent FMN reductase HHJ61_00105 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HHJ61_00105 PF02769 AIR synthase related protein, C-terminal domain HHJ61_00105 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HHJ61_00110 PF00696 Amino acid kinase family HHJ61_00110 PF01472 PUA domain HHJ61_00120 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) HHJ61_00125 PF00005 ABC transporter HHJ61_00130 PF01061 ABC-2 type transporter HHJ61_00140 PF03951 Glutamine synthetase, beta-Grasp domain HHJ61_00140 PF00120 Glutamine synthetase, catalytic domain HHJ61_00150 PF00438 S-adenosylmethionine synthetase, N-terminal domain HHJ61_00150 PF02773 S-adenosylmethionine synthetase, C-terminal domain HHJ61_00150 PF02772 S-adenosylmethionine synthetase, central domain HHJ61_00155 PF00795 Carbon-nitrogen hydrolase HHJ61_00160 PF03471 Transporter associated domain HHJ61_00160 PF00571 CBS domain HHJ61_00165 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_00170 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_00175 PF00497 Bacterial extracellular solute-binding proteins, family 3 HHJ61_00180 PF00005 ABC transporter HHJ61_00185 PF01594 AI-2E family transporter HHJ61_00190 PF03960 ArsC family HHJ61_00195 PF03889 Alternative ribosome-rescue factor A HHJ61_00200 PF17347 Family of unknown function (DUF5377) HHJ61_00205 PF02881 SRP54-type protein, helical bundle domain HHJ61_00205 PF00448 SRP54-type protein, GTPase domain HHJ61_00205 PF02978 Signal peptide binding domain HHJ61_00210 PF01578 Cytochrome C assembly protein HHJ61_00215 PF01595 Cyclin M transmembrane N-terminal domain HHJ61_00215 PF03471 Transporter associated domain HHJ61_00215 PF00571 CBS domain HHJ61_00220 PF01618 MotA/TolQ/ExbB proton channel family HHJ61_00225 PF02472 Biopolymer transport protein ExbD/TolR HHJ61_00230 PF03544 Gram-negative bacterial TonB protein C-terminal HHJ61_00235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ61_00235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ61_00235 PF02378 Phosphotransferase system, EIIC HHJ61_00240 PF01232 Mannitol dehydrogenase Rossmann domain HHJ61_00240 PF08125 Mannitol dehydrogenase C-terminal domain HHJ61_00245 PF05068 Mannitol repressor HHJ61_00250 PF04488 Glycosyltransferase sugar-binding region containing DXD motif HHJ61_00255 PF01612 3'-5' exonuclease HHJ61_00255 PF01367 5'-3' exonuclease, C-terminal SAM fold HHJ61_00255 PF00476 DNA polymerase family A HHJ61_00255 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HHJ61_00260 PF02080 TrkA-C domain HHJ61_00260 PF00999 Sodium/hydrogen exchanger family HHJ61_00260 PF03471 Transporter associated domain HHJ61_00265 PF02028 BCCT, betaine/carnitine/choline family transporter HHJ61_00285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HHJ61_00285 PF05697 Bacterial trigger factor protein (TF) HHJ61_00285 PF05698 Bacterial trigger factor protein (TF) C-terminus HHJ61_00290 PF00574 Clp protease HHJ61_00295 PF06689 ClpX C4-type zinc finger HHJ61_00295 PF10431 C-terminal, D2-small domain, of ClpB protein HHJ61_00295 PF07724 AAA domain (Cdc48 subfamily) HHJ61_00300 PF00206 Lyase HHJ61_00300 PF10415 Fumarase C C-terminus HHJ61_00305 PF00501 AMP-binding enzyme HHJ61_00310 PF00583 Acetyltransferase (GNAT) family HHJ61_00315 PF03603 DNA polymerase III psi subunit HHJ61_00320 PF10431 C-terminal, D2-small domain, of ClpB protein HHJ61_00320 PF00004 ATPase family associated with various cellular activities (AAA) HHJ61_00320 PF07724 AAA domain (Cdc48 subfamily) HHJ61_00325 PF00227 Proteasome subunit HHJ61_00330 PF01040 UbiA prenyltransferase family HHJ61_00335 PF00581 Rhodanese-like domain HHJ61_00340 PF05525 Branched-chain amino acid transport protein HHJ61_00345 PF09371 Tex-like protein N-terminal domain HHJ61_00345 PF16921 Tex protein YqgF-like domain HHJ61_00345 PF00575 S1 RNA binding domain HHJ61_00345 PF17674 HHH domain HHJ61_00360 PF01272 Transcription elongation factor, GreA/GreB, C-term HHJ61_00360 PF03449 Transcription elongation factor, N-terminal HHJ61_00370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ61_00375 PF00873 AcrB/AcrD/AcrF family HHJ61_00380 PF03932 CutC family HHJ61_00385 PF02378 Phosphotransferase system, EIIC HHJ61_00390 PF01112 Asparaginase HHJ61_00395 PF00883 Cytosol aminopeptidase family, catalytic domain HHJ61_00395 PF02789 Cytosol aminopeptidase family, N-terminal domain HHJ61_00400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HHJ61_00405 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HHJ61_00415 PF03952 Enolase, N-terminal domain HHJ61_00415 PF00113 Enolase, C-terminal TIM barrel domain HHJ61_00420 PF07119 Protein of unknown function (DUF1375) HHJ61_00425 PF00580 UvrD/REP helicase N-terminal domain HHJ61_00425 PF13361 UvrD-like helicase C-terminal domain HHJ61_00445 PF00186 Dihydrofolate reductase HHJ61_00450 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HHJ61_00450 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HHJ61_00465 PF01207 Dihydrouridine synthase (Dus) HHJ61_00475 PF01048 Phosphorylase superfamily HHJ61_00480 PF01676 Metalloenzyme superfamily HHJ61_00485 PF07670 Nucleoside recognition HHJ61_00485 PF07662 Na+ dependent nucleoside transporter C-terminus HHJ61_00485 PF01773 Na+ dependent nucleoside transporter N-terminus HHJ61_00490 PF17283 SprT-like zinc ribbon domain HHJ61_00490 PF10263 SprT-like family HHJ61_00495 PF02462 Opacity family porin protein HHJ61_00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ61_00500 PF00183 Hsp90 protein HHJ61_00510 PF01648 4'-phosphopantetheinyl transferase superfamily HHJ61_00515 PF01145 SPFH domain / Band 7 family HHJ61_00520 PF01145 SPFH domain / Band 7 family HHJ61_00530 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HHJ61_00535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HHJ61_00535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HHJ61_00540 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HHJ61_00540 PF00271 Helicase conserved C-terminal domain HHJ61_00540 PF08463 EcoEI R protein C-terminal HHJ61_00540 PF04851 Type III restriction enzyme, res subunit HHJ61_00545 PF02618 YceG-like family HHJ61_00550 PF02223 Thymidylate kinase HHJ61_00555 PF09115 DNA polymerase III, delta subunit, C terminal HHJ61_00560 PF01026 TatD related DNase HHJ61_00565 PF07509 Protein of unknown function (DUF1523) HHJ61_00570 PF01595 Cyclin M transmembrane N-terminal domain HHJ61_00570 PF03471 Transporter associated domain HHJ61_00570 PF00571 CBS domain HHJ61_00575 PF01197 Ribosomal protein L31 HHJ61_00580 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HHJ61_00580 PF00270 DEAD/DEAH box helicase HHJ61_00580 PF00271 Helicase conserved C-terminal domain HHJ61_00580 PF18074 Primosomal protein N C-terminal domain HHJ61_00580 PF17764 3′ DNA-binding domain (3′BD) HHJ61_00585 PF05036 Sporulation related domain HHJ61_00590 PF00174 Oxidoreductase molybdopterin binding domain HHJ61_00595 PF01794 Ferric reductase like transmembrane component HHJ61_00600 PF05958 tRNA (Uracil-5-)-methyltransferase HHJ61_00605 PF00933 Glycosyl hydrolase family 3 N terminal domain HHJ61_00615 PF01230 HIT domain HHJ61_00620 PF01226 Formate/nitrite transporter HHJ61_00625 PF02901 Pyruvate formate lyase-like HHJ61_00625 PF01228 Glycine radical HHJ61_00630 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HHJ61_00635 PF04055 Radical SAM superfamily HHJ61_00645 PF01263 Aldose 1-epimerase HHJ61_00650 PF10509 Galactokinase galactose-binding signature HHJ61_00650 PF08544 GHMP kinases C terminal HHJ61_00650 PF00288 GHMP kinases N terminal domain HHJ61_00655 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HHJ61_00655 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HHJ61_00660 PF13407 Periplasmic binding protein domain HHJ61_00665 PF00005 ABC transporter HHJ61_00670 PF02653 Branched-chain amino acid transport system / permease component HHJ61_00675 PF03918 Cytochrome C biogenesis protein HHJ61_00680 PF03918 Cytochrome C biogenesis protein HHJ61_00685 PF08534 Redoxin HHJ61_00690 PF01578 Cytochrome C assembly protein HHJ61_00690 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HHJ61_00695 PF03100 CcmE HHJ61_00700 PF04995 Heme exporter protein D (CcmD) HHJ61_00705 PF01578 Cytochrome C assembly protein HHJ61_00710 PF03379 CcmB protein HHJ61_00715 PF00005 ABC transporter HHJ61_00720 PF00682 HMGL-like HHJ61_00720 PF08502 LeuA allosteric (dimerisation) domain HHJ61_00725 PF00180 Isocitrate/isopropylmalate dehydrogenase HHJ61_00730 PF00330 Aconitase family (aconitate hydratase) HHJ61_00735 PF00694 Aconitase C-terminal domain HHJ61_00740 PF00308 Bacterial dnaA protein HHJ61_00745 PF00860 Permease family HHJ61_00755 PF04345 Chorismate lyase HHJ61_00760 PF01502 Phosphoribosyl-AMP cyclohydrolase HHJ61_00760 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HHJ61_00770 PF00977 Histidine biosynthesis protein HHJ61_00775 PF00977 Histidine biosynthesis protein HHJ61_00780 PF00578 AhpC/TSA family HHJ61_00785 PF00117 Glutamine amidotransferase class-I HHJ61_00790 PF17761 DUF1016 N-terminal domain HHJ61_00790 PF06250 YhcG PDDEXK nuclease domain HHJ61_00795 PF00475 Imidazoleglycerol-phosphate dehydratase HHJ61_00800 PF00155 Aminotransferase class I and II HHJ61_00810 PF00815 Histidinol dehydrogenase HHJ61_00815 PF01634 ATP phosphoribosyltransferase HHJ61_00815 PF08029 HisG, C-terminal domain HHJ61_00820 PF08241 Methyltransferase domain HHJ61_00825 PF03222 Tryptophan/tyrosine permease family HHJ61_00830 PF00719 Inorganic pyrophosphatase HHJ61_00835 PF01435 Peptidase family M48 HHJ61_00835 PF07720 Tetratricopeptide repeat HHJ61_00845 PF01551 Peptidase family M23 HHJ61_00845 PF01476 LysM domain HHJ61_00855 PF09335 SNARE associated Golgi protein HHJ61_00860 PF01975 Survival protein SurE HHJ61_00865 PF01142 tRNA pseudouridine synthase D (TruD) HHJ61_00870 PF02542 YgbB family HHJ61_00880 PF13419 Haloacid dehalogenase-like hydrolase HHJ61_00885 PF12464 Maltose acetyltransferase HHJ61_00885 PF14602 Hexapeptide repeat of succinyl-transferase HHJ61_00895 PF02664 S-Ribosylhomocysteinase (LuxS) HHJ61_00900 PF06969 HemN C-terminal domain HHJ61_00900 PF04055 Radical SAM superfamily HHJ61_00905 PF01725 Ham1 family HHJ61_00915 PF00860 Permease family HHJ61_00925 PF01370 NAD dependent epimerase/dehydratase family HHJ61_00930 PF07690 Major Facilitator Superfamily HHJ61_00935 PF01758 Sodium Bile acid symporter family HHJ61_00940 PF00512 His Kinase A (phospho-acceptor) domain HHJ61_00940 PF01627 Hpt domain HHJ61_00940 PF18415 Histidine kinase receptor ArcB trans-membrane domain HHJ61_00940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ61_00940 PF00989 PAS fold HHJ61_00940 PF00072 Response regulator receiver domain HHJ61_00945 PF01176 Translation initiation factor 1A / IF-1 HHJ61_00955 PF12404 Peptidase HHJ61_00955 PF00883 Cytosol aminopeptidase family, catalytic domain HHJ61_00960 PF00334 Nucleoside diphosphate kinase HHJ61_00965 PF00365 Phosphofructokinase HHJ61_00970 PF16916 Dimerisation domain of Zinc Transporter HHJ61_00970 PF01545 Cation efflux family HHJ61_00980 PF03883 Peroxide stress protein YaaA HHJ61_00985 PF03167 Uracil DNA glycosylase superfamily HHJ61_00990 PF01228 Glycine radical HHJ61_00995 PF03144 Elongation factor Tu domain 2 HHJ61_00995 PF06421 GTP-binding protein LepA C-terminus HHJ61_00995 PF00679 Elongation factor G C-terminus HHJ61_00995 PF00009 Elongation factor Tu GTP binding domain HHJ61_01000 PF10502 Signal peptidase, peptidase S26 HHJ61_01005 PF14622 Ribonuclease-III-like HHJ61_01005 PF00035 Double-stranded RNA binding motif HHJ61_01010 PF07650 KH domain HHJ61_01010 PF01926 50S ribosome-binding GTPase HHJ61_01015 PF01926 50S ribosome-binding GTPase HHJ61_01015 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HHJ61_01020 PF08206 Ribonuclease B OB domain HHJ61_01020 PF08461 Ribonuclease R winged-helix domain HHJ61_01020 PF00575 S1 RNA binding domain HHJ61_01020 PF17876 Cold shock domain HHJ61_01020 PF00773 RNB domain HHJ61_01025 PF08032 RNA 2'-O ribose methyltransferase substrate binding HHJ61_01025 PF00588 SpoU rRNA Methylase family HHJ61_01030 PF07690 Major Facilitator Superfamily HHJ61_01035 PF00529 HlyD membrane-fusion protein of T1SS HHJ61_01035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ61_01040 PF01047 MarR family HHJ61_01050 PF05658 Head domain of trimeric autotransporter adhesin HHJ61_01050 PF03895 YadA-like membrane anchor domain HHJ61_01050 PF05662 Coiled stalk of trimeric autotransporter adhesin HHJ61_01055 PF01047 MarR family HHJ61_01060 PF03601 Conserved hypothetical protein 698 HHJ61_01065 PF17287 POTRA domain HHJ61_01065 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HHJ61_01065 PF08479 POTRA domain, ShlB-type HHJ61_01070 PF04829 Pre-toxin domain with VENN motif HHJ61_01070 PF13018 Extended Signal Peptide of Type V secretion system HHJ61_01070 PF13332 Hemagglutinin repeat HHJ61_01070 PF13018 Extended Signal Peptide of Type V secretion system HHJ61_01070 PF04829 Pre-toxin domain with VENN motif HHJ61_01070 PF05860 haemagglutination activity domain HHJ61_01070 PF05860 haemagglutination activity domain HHJ61_01070 PF13332 Hemagglutinin repeat HHJ61_01080 PF00545 ribonuclease HHJ61_01105 PF00545 ribonuclease HHJ61_01170 PF01926 50S ribosome-binding GTPase HHJ61_01170 PF01018 GTP1/OBG HHJ61_01175 PF00892 EamA-like transporter family HHJ61_01180 PF01016 Ribosomal L27 protein HHJ61_01185 PF00829 Ribosomal prokaryotic L21 protein HHJ61_01190 PF00348 Polyprenyl synthetase HHJ61_01195 PF02677 Epoxyqueuosine reductase QueH HHJ61_01200 PF00085 Thioredoxin HHJ61_01205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HHJ61_01205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HHJ61_01210 PF01053 Cys/Met metabolism PLP-dependent enzyme HHJ61_01230 PF00589 Phage integrase family HHJ61_01275 PF04381 Putative exonuclease, RdgC HHJ61_01290 PF00436 Single-strand binding protein family HHJ61_01340 PF07411 Domain of unknown function (DUF1508) HHJ61_01345 PF05973 Phage derived protein Gp49-like (DUF891) HHJ61_01350 PF01381 Helix-turn-helix HHJ61_01365 PF01726 LexA DNA binding domain HHJ61_01365 PF00717 Peptidase S24-like HHJ61_01405 PF07102 Protein of unknown function (DUF1364) HHJ61_01430 PF07411 Domain of unknown function (DUF1508) HHJ61_01535 PF00436 Single-strand binding protein family HHJ61_01560 PF02498 BRO family, N-terminal domain HHJ61_01560 PF10548 P22AR C-terminal domain HHJ61_01570 PF00589 Phage integrase family HHJ61_01580 PF00749 tRNA synthetases class I (E and Q), catalytic domain HHJ61_01590 PF02091 Glycyl-tRNA synthetase alpha subunit HHJ61_01605 PF17761 DUF1016 N-terminal domain HHJ61_01605 PF06250 YhcG PDDEXK nuclease domain HHJ61_01610 PF04480 Protein of unknown function (DUF559) HHJ61_01620 PF05746 DALR anticodon binding domain HHJ61_01620 PF02092 Glycyl-tRNA synthetase beta subunit HHJ61_01625 PF02082 Transcriptional regulator HHJ61_01630 PF00042 Globin HHJ61_01630 PF00970 Oxidoreductase FAD-binding domain HHJ61_01630 PF00175 Oxidoreductase NAD-binding domain HHJ61_01635 PF12762 ISXO2-like transposase domain HHJ61_01640 PF00912 Transglycosylase HHJ61_01640 PF00905 Penicillin binding protein transpeptidase domain HHJ61_01640 PF17092 Penicillin-binding protein OB-like domain HHJ61_01645 PF11104 Type IV pilus assembly protein PilM; HHJ61_01665 PF00263 Bacterial type II and III secretion system protein HHJ61_01665 PF03958 Bacterial type II/III secretion system short domain HHJ61_01670 PF01202 Shikimate kinase HHJ61_01675 PF01761 3-dehydroquinate synthase HHJ61_01680 PF02086 D12 class N6 adenine-specific DNA methyltransferase HHJ61_01685 PF05258 Dna[CI] antecedent, DciA HHJ61_01690 PF10818 Protein of unknown function (DUF2547) HHJ61_01695 PF01043 SecA preprotein cross-linking domain HHJ61_01695 PF02810 SEC-C motif HHJ61_01695 PF07517 SecA DEAD-like domain HHJ61_01695 PF07516 SecA Wing and Scaffold domain HHJ61_01700 PF00293 NUDIX domain HHJ61_01705 PF00270 DEAD/DEAH box helicase HHJ61_01705 PF00271 Helicase conserved C-terminal domain HHJ61_01705 PF03461 TRCF domain HHJ61_01705 PF02559 CarD-like/TRCF domain HHJ61_01705 PF17757 UvrB interaction domain HHJ61_01715 PF13580 SIS domain HHJ61_01720 PF01464 Transglycosylase SLT domain HHJ61_01720 PF00497 Bacterial extracellular solute-binding proteins, family 3 HHJ61_01730 PF00589 Phage integrase family HHJ61_01730 PF13356 Arm DNA-binding domain HHJ61_01760 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HHJ61_01810 PF00166 Chaperonin 10 Kd subunit HHJ61_01815 PF00118 TCP-1/cpn60 chaperonin family HHJ61_01820 PF00291 Pyridoxal-phosphate dependent enzyme HHJ61_01830 PF04354 ZipA, C-terminal FtsZ-binding domain HHJ61_01835 PF01653 NAD-dependent DNA ligase adenylation domain HHJ61_01835 PF03120 NAD-dependent DNA ligase OB-fold domain HHJ61_01835 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HHJ61_01835 PF00533 BRCA1 C Terminus (BRCT) domain HHJ61_01835 PF12826 Helix-hairpin-helix motif HHJ61_01840 PF03477 ATP cone domain HHJ61_01840 PF13597 Anaerobic ribonucleoside-triphosphate reductase HHJ61_01850 PF01026 TatD related DNase HHJ61_01855 PF00490 Delta-aminolevulinic acid dehydratase HHJ61_01860 PF00902 Sec-independent protein translocase protein (TatC) HHJ61_01870 PF02416 mttA/Hcf106 family HHJ61_01875 PF03109 ABC1 family HHJ61_01880 PF02036 SCP-2 sterol transfer family HHJ61_01885 PF01209 ubiE/COQ5 methyltransferase family HHJ61_01890 PF00939 Sodium:sulfate symporter transmembrane region HHJ61_01895 PF03737 Aldolase/RraA HHJ61_01900 PF01040 UbiA prenyltransferase family HHJ61_01905 PF01980 tRNA-methyltransferase O HHJ61_01905 PF18389 TrmO C-terminal domain HHJ61_01910 PF00230 Major intrinsic protein HHJ61_01915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HHJ61_01915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HHJ61_01920 PF00589 Phage integrase family HHJ61_01920 PF02899 Phage integrase, N-terminal SAM-like domain HHJ61_01925 PF01812 5-formyltetrahydrofolate cyclo-ligase family HHJ61_01935 PF05164 Cell division protein ZapA HHJ61_01940 PF03695 Uncharacterised protein family (UPF0149) HHJ61_01945 PF05195 Aminopeptidase P, N-terminal domain HHJ61_01945 PF00557 Metallopeptidase family M24 HHJ61_01950 PF01494 FAD binding domain HHJ61_01955 PF01494 FAD binding domain HHJ61_01960 PF13407 Periplasmic binding protein domain HHJ61_01965 PF13407 Periplasmic binding protein domain HHJ61_01970 PF00005 ABC transporter HHJ61_01975 PF02653 Branched-chain amino acid transport system / permease component HHJ61_01980 PF00027 Cyclic nucleotide-binding domain HHJ61_01980 PF13545 Crp-like helix-turn-helix domain HHJ61_01985 PF06794 Uncharacterised protein family (UPF0270) HHJ61_01990 PF00440 Bacterial regulatory proteins, tetR family HHJ61_01995 PF00692 dUTPase HHJ61_02000 PF04127 DNA / pantothenate metabolism flavoprotein HHJ61_02000 PF02441 Flavoprotein HHJ61_02005 PF04002 RadC-like JAB domain HHJ61_02010 PF00830 Ribosomal L28 family HHJ61_02015 PF00471 Ribosomal protein L33 HHJ61_02020 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HHJ61_02020 PF06827 Zinc finger found in FPG and IleRS HHJ61_02020 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HHJ61_02025 PF00701 Dihydrodipicolinate synthetase family HHJ61_02030 PF01380 SIS domain HHJ61_02030 PF01418 Helix-turn-helix domain, rpiR family HHJ61_02035 PF04074 YhcH/YjgK/YiaL HHJ61_02040 PF00480 ROK family HHJ61_02045 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HHJ61_02050 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HHJ61_02050 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HHJ61_02055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HHJ61_02060 PF09190 DALR domain HHJ61_02060 PF01406 tRNA synthetases class I (C) catalytic domain HHJ61_02065 PF05860 haemagglutination activity domain HHJ61_02070 PF08479 POTRA domain, ShlB-type HHJ61_02070 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HHJ61_02075 PF07715 TonB-dependent Receptor Plug Domain HHJ61_02075 PF00593 TonB dependent receptor HHJ61_02080 PF06228 Haem utilisation ChuX/HutX HHJ61_02085 PF01243 Pyridoxamine 5'-phosphate oxidase HHJ61_02090 PF04093 rod shape-determining protein MreD HHJ61_02095 PF04085 rod shape-determining protein MreC HHJ61_02105 PF17760 UvrA interaction domain HHJ61_02105 PF17755 UvrA DNA-binding domain HHJ61_02110 PF00436 Single-strand binding protein family HHJ61_02135 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HHJ61_02170 PF00248 Aldo/keto reductase family HHJ61_02175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ61_02175 PF03466 LysR substrate binding domain HHJ61_02180 PF03605 Anaerobic c4-dicarboxylate membrane transporter HHJ61_02190 PF00550 Phosphopantetheine attachment site HHJ61_02200 PF00698 Acyl transferase domain HHJ61_02205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HHJ61_02205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HHJ61_02210 PF02504 Fatty acid synthesis protein HHJ61_02215 PF01783 Ribosomal L32p protein family HHJ61_02220 PF02620 Large ribosomal RNA subunit accumulation protein YceD HHJ61_02230 PF08241 Methyltransferase domain HHJ61_02235 PF04301 Protein of unknown function (DUF452) HHJ61_02240 PF00155 Aminotransferase class I and II HHJ61_02245 PF00202 Aminotransferase class-III HHJ61_02260 PF02666 Phosphatidylserine decarboxylase HHJ61_02265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HHJ61_02265 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HHJ61_02270 PF12762 ISXO2-like transposase domain HHJ61_02275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HHJ61_02275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HHJ61_02280 PF00625 Guanylate kinase HHJ61_02285 PF01192 RNA polymerase Rpb6 HHJ61_02290 PF13291 ACT domain HHJ61_02290 PF04607 Region found in RelA / SpoT proteins HHJ61_02290 PF02824 TGS domain HHJ61_02295 PF17191 RecG wedge domain HHJ61_02295 PF00271 Helicase conserved C-terminal domain HHJ61_02295 PF00270 DEAD/DEAH box helicase HHJ61_02300 PF01177 Asp/Glu/Hydantoin racemase HHJ61_02330 PF08239 Bacterial SH3 domain HHJ61_02335 PF01743 Poly A polymerase head domain HHJ61_02335 PF01966 HD domain HHJ61_02335 PF12627 Probable RNA and SrmB- binding site of polymerase A HHJ61_02340 PF08942 Domain of unknown function (DUF1919) HHJ61_02345 PF02682 Carboxyltransferase domain, subdomain C and D HHJ61_02350 PF02626 Carboxyltransferase domain, subdomain A and B HHJ61_02355 PF03746 LamB/YcsF family HHJ61_02360 PF01566 Natural resistance-associated macrophage protein HHJ61_02370 PF13419 Haloacid dehalogenase-like hydrolase HHJ61_02375 PF02219 Methylenetetrahydrofolate reductase HHJ61_02385 PF03372 Endonuclease/Exonuclease/phosphatase family HHJ61_02390 PF00072 Response regulator receiver domain HHJ61_02390 PF00196 Bacterial regulatory proteins, luxR family HHJ61_02395 PF02525 Flavodoxin-like fold HHJ61_02400 PF01343 Peptidase family S49 HHJ61_02400 PF08496 Peptidase family S49 N-terminal HHJ61_02410 PF00149 Calcineurin-like phosphoesterase HHJ61_02415 PF03477 ATP cone domain HHJ61_02415 PF00317 Ribonucleotide reductase, all-alpha domain HHJ61_02415 PF02867 Ribonucleotide reductase, barrel domain HHJ61_02420 PF06965 Na+/H+ antiporter 1 HHJ61_02425 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HHJ61_02430 PF00578 AhpC/TSA family HHJ61_02435 PF06733 DEAD_2 HHJ61_02435 PF13307 Helicase C-terminal domain HHJ61_02440 PF00814 Glycoprotease family HHJ61_02445 PF13193 AMP-binding enzyme C-terminal domain HHJ61_02445 PF00501 AMP-binding enzyme HHJ61_02450 PF00570 HRDC domain HHJ61_02450 PF01612 3'-5' exonuclease HHJ61_02465 PF00005 ABC transporter HHJ61_02465 PF00664 ABC transporter transmembrane region HHJ61_02470 PF00664 ABC transporter transmembrane region HHJ61_02470 PF00005 ABC transporter HHJ61_02475 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ61_02485 PF02447 GntP family permease HHJ61_02490 PF01202 Shikimate kinase HHJ61_02500 PF00209 Sodium:neurotransmitter symporter family HHJ61_02505 PF00633 Helix-hairpin-helix motif HHJ61_02505 PF10576 Iron-sulfur binding domain of endonuclease III HHJ61_02505 PF00730 HhH-GPD superfamily base excision DNA repair protein HHJ61_02510 PF02508 Rnf-Nqr subunit, membrane protein HHJ61_02515 PF04205 FMN-binding domain HHJ61_02520 PF03116 NQR2, RnfD, RnfE family HHJ61_02525 PF13237 4Fe-4S dicluster domain HHJ61_02525 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HHJ61_02525 PF13375 RnfC Barrel sandwich hybrid domain HHJ61_02530 PF04060 Putative Fe-S cluster HHJ61_02535 PF02508 Rnf-Nqr subunit, membrane protein HHJ61_02540 PF08338 Domain of unknown function (DUF1731) HHJ61_02540 PF01370 NAD dependent epimerase/dehydratase family HHJ61_02545 PF02863 Arginine repressor, C-terminal domain HHJ61_02545 PF01316 Arginine repressor, DNA binding domain HHJ61_02550 PF00056 lactate/malate dehydrogenase, NAD binding domain HHJ61_02550 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HHJ61_02565 PF01380 SIS domain HHJ61_02565 PF00571 CBS domain HHJ61_02575 PF05175 Methyltransferase small domain HHJ61_02580 PF01713 Smr domain HHJ61_02585 PF01416 tRNA pseudouridine synthase HHJ61_02590 PF17848 Acetyl-coA carboxylase zinc finger domain HHJ61_02590 PF01039 Carboxyl transferase domain HHJ61_02595 PF08245 Mur ligase middle domain HHJ61_02600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HHJ61_02600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HHJ61_02605 PF03701 Uncharacterised protein family (UPF0181) HHJ61_02610 PF00313 'Cold-shock' DNA-binding domain HHJ61_02625 PF00356 Bacterial regulatory proteins, lacI family HHJ61_02625 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HHJ61_02630 PF02769 AIR synthase related protein, C-terminal domain HHJ61_02630 PF00586 AIR synthase related protein, N-terminal domain HHJ61_02635 PF17414 MatP C-terminal ribbon-helix-helix domain HHJ61_02635 PF06303 MatP N-terminal domain HHJ61_02640 PF05362 Lon protease (S16) C-terminal proteolytic domain HHJ61_02640 PF13654 AAA domain HHJ61_02645 PF07977 FabA-like domain HHJ61_02650 PF04073 Aminoacyl-tRNA editing domain HHJ61_02660 PF00860 Permease family HHJ61_02665 PF02635 DsrE/DsrF-like family HHJ61_02670 PF00580 UvrD/REP helicase N-terminal domain HHJ61_02670 PF13361 UvrD-like helicase C-terminal domain HHJ61_02670 PF12705 PD-(D/E)XK nuclease superfamily HHJ61_02675 PF13538 UvrD-like helicase C-terminal domain HHJ61_02680 PF13018 Extended Signal Peptide of Type V secretion system HHJ61_02680 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin HHJ61_02680 PF03895 YadA-like membrane anchor domain HHJ61_02680 PF05662 Coiled stalk of trimeric autotransporter adhesin HHJ61_02685 PF00152 tRNA synthetases class II (D, K and N) HHJ61_02685 PF01336 OB-fold nucleic acid binding domain HHJ61_02690 PF01047 MarR family HHJ61_02690 PF00480 ROK family HHJ61_02700 PF01842 ACT domain HHJ61_02700 PF00551 Formyl transferase HHJ61_02705 PF00300 Histidine phosphatase superfamily (branch 1) HHJ61_02710 PF13396 Phospholipase_D-nuclease N-terminal HHJ61_02710 PF13091 PLD-like domain HHJ61_02715 PF00849 RNA pseudouridylate synthase HHJ61_02720 PF01409 tRNA synthetases class II core domain (F) HHJ61_02720 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HHJ61_02725 PF03147 Ferredoxin-fold anticodon binding domain HHJ61_02725 PF03483 B3/4 domain HHJ61_02725 PF01588 Putative tRNA binding domain HHJ61_02725 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HHJ61_02725 PF03484 tRNA synthetase B5 domain HHJ61_02730 PF00216 Bacterial DNA-binding protein HHJ61_02735 PF00877 NlpC/P60 family HHJ61_02740 PF03797 Autotransporter beta-domain HHJ61_02745 PF01171 PP-loop family HHJ61_02750 PF17192 MukF middle domain HHJ61_02750 PF17193 MukF C-terminal domain HHJ61_02750 PF03882 MukF winged-helix domain HHJ61_02755 PF04288 MukE-like family HHJ61_02760 PF04310 MukB N-terminal HHJ61_02760 PF16330 MukB hinge domain HHJ61_02770 PF00929 Exonuclease HHJ61_02770 PF08411 Exonuclease C-terminal HHJ61_02785 PF12762 ISXO2-like transposase domain HHJ61_02790 PF04386 Stringent starvation protein B HHJ61_02795 PF00043 Glutathione S-transferase, C-terminal domain HHJ61_02795 PF13417 Glutathione S-transferase, N-terminal domain HHJ61_02800 PF00380 Ribosomal protein S9/S16 HHJ61_02805 PF00572 Ribosomal protein L13 HHJ61_02810 PF00849 RNA pseudouridylate synthase HHJ61_02815 PF04287 tRNA pseudouridine synthase C HHJ61_02820 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) HHJ61_02830 PF14489 QueF-like protein HHJ61_02830 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HHJ61_02835 PF11892 Domain of unknown function (DUF3412) HHJ61_02835 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HHJ61_02835 PF03641 Possible lysine decarboxylase HHJ61_02840 PF08681 Protein of unknown function (DUF1778) HHJ61_02850 PF00535 Glycosyl transferase family 2 HHJ61_02855 PF01061 ABC-2 type transporter HHJ61_02860 PF00005 ABC transporter HHJ61_02865 PF04315 Elongation factor P hydroxylase HHJ61_02870 PF01435 Peptidase family M48 HHJ61_02875 PF11798 IMS family HHH motif HHJ61_02875 PF00817 impB/mucB/samB family HHJ61_02880 PF00343 Carbohydrate phosphorylase HHJ61_02885 PF08323 Starch synthase catalytic domain HHJ61_02885 PF00534 Glycosyl transferases group 1 HHJ61_02890 PF00483 Nucleotidyl transferase HHJ61_02895 PF00128 Alpha amylase, catalytic domain HHJ61_02895 PF18390 Glycogen debranching enzyme C-terminal domain HHJ61_02895 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HHJ61_02900 PF00128 Alpha amylase, catalytic domain HHJ61_02900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HHJ61_02900 PF02806 Alpha amylase, C-terminal all-beta domain HHJ61_02905 PF02446 4-alpha-glucanotransferase HHJ61_02910 PF05656 Protein of unknown function (DUF805) HHJ61_02920 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HHJ61_02920 PF00749 tRNA synthetases class I (E and Q), catalytic domain HHJ61_02925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ61_02930 PF12704 MacB-like periplasmic core domain HHJ61_02930 PF02687 FtsX-like permease family HHJ61_02930 PF00005 ABC transporter HHJ61_02935 PF02321 Outer membrane efflux protein HHJ61_02945 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ61_02945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HHJ61_02950 PF00364 Biotin-requiring enzyme HHJ61_02950 PF02817 e3 binding domain HHJ61_02950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HHJ61_02955 PF00456 Transketolase, thiamine diphosphate binding domain HHJ61_02955 PF17831 Pyruvate dehydrogenase E1 component middle domain HHJ61_02960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HHJ61_02965 PF05524 PEP-utilising enzyme, N-terminal HHJ61_02965 PF00391 PEP-utilising enzyme, mobile domain HHJ61_02965 PF02896 PEP-utilising enzyme, TIM barrel domain HHJ61_02970 PF00381 PTS HPr component phosphorylation site HHJ61_02975 PF03193 RsgA GTPase HHJ61_02980 PF00929 Exonuclease HHJ61_02995 PF03462 PCRF domain HHJ61_02995 PF00472 RF-1 domain HHJ61_03000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HHJ61_03000 PF02403 Seryl-tRNA synthetase N-terminal domain HHJ61_03005 PF12002 MgsA AAA+ ATPase C terminal HHJ61_03005 PF16193 AAA C-terminal domain HHJ61_03005 PF00004 ATPase family associated with various cellular activities (AAA) HHJ61_03020 PF03548 Outer membrane lipoprotein carrier protein LolA HHJ61_03025 PF09397 Ftsk gamma domain HHJ61_03025 PF01580 FtsK/SpoIIIE family HHJ61_03025 PF17854 FtsK alpha domain HHJ61_03025 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HHJ61_03030 PF01037 Lrp/AsnC ligand binding domain HHJ61_03035 PF13286 Phosphohydrolase-associated domain HHJ61_03035 PF01966 HD domain HHJ61_03040 PF04172 LrgB-like family HHJ61_03045 PF03788 LrgA family HHJ61_03050 PF00565 Staphylococcal nuclease homologue HHJ61_03055 PF00266 Aminotransferase class-V HHJ61_03060 PF02657 Fe-S metabolism associated domain HHJ61_03065 PF16036 Chalcone isomerase-like HHJ61_03070 PF05728 Uncharacterised protein family (UPF0227) HHJ61_03075 PF08443 RimK-like ATP-grasp domain HHJ61_03075 PF18030 RimK PreATP-grasp domain HHJ61_03080 PF00462 Glutaredoxin HHJ61_03085 PF00583 Acetyltransferase (GNAT) family HHJ61_03085 PF00696 Amino acid kinase family HHJ61_03090 PF00171 Aldehyde dehydrogenase family HHJ61_03095 PF01258 Prokaryotic dksA/traR C4-type zinc finger HHJ61_03100 PF12627 Probable RNA and SrmB- binding site of polymerase A HHJ61_03100 PF01743 Poly A polymerase head domain HHJ61_03100 PF12626 Polymerase A arginine-rich C-terminus HHJ61_03105 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HHJ61_03110 PF02926 THUMP domain HHJ61_03110 PF02568 Thiamine biosynthesis protein (ThiI) HHJ61_03120 PF00348 Polyprenyl synthetase HHJ61_03125 PF02780 Transketolase, C-terminal domain HHJ61_03125 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HHJ61_03125 PF02779 Transketolase, pyrimidine binding domain HHJ61_03130 PF01985 CRS1 / YhbY (CRM) domain HHJ61_03135 PF01272 Transcription elongation factor, GreA/GreB, C-term HHJ61_03135 PF03449 Transcription elongation factor, N-terminal HHJ61_03140 PF00111 2Fe-2S iron-sulfur cluster binding domain HHJ61_03140 PF03473 MOSC domain HHJ61_03140 PF03476 MOSC N-terminal beta barrel domain HHJ61_03150 PF02153 Prephenate dehydrogenase HHJ61_03150 PF01817 Chorismate mutase type II HHJ61_03155 PF00793 DAHP synthetase I family HHJ61_03160 PF02811 PHP domain HHJ61_03165 PF01180 Dihydroorotate dehydrogenase HHJ61_03170 PF01433 Peptidase family M1 domain HHJ61_03170 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HHJ61_03170 PF11940 Domain of unknown function (DUF3458) Ig-like fold HHJ61_03175 PF00731 AIR carboxylase HHJ61_03220 PF02441 Flavoprotein HHJ61_03225 PF00156 Phosphoribosyl transferase domain HHJ61_03230 PF02674 Colicin V production protein HHJ61_03235 PF04217 Protein of unknown function, DUF412 HHJ61_03240 PF00871 Acetokinase family HHJ61_03245 PF07085 DRTGG domain HHJ61_03245 PF01515 Phosphate acetyl/butaryl transferase HHJ61_03255 PF13954 PapC N-terminal domain HHJ61_03255 PF13953 PapC C-terminal domain HHJ61_03255 PF00577 Outer membrane usher protein HHJ61_03260 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ61_03260 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ61_03265 PF16970 Type-1 fimbrial protein, A HHJ61_03270 PF05552 Conserved TM helix HHJ61_03270 PF00924 Mechanosensitive ion channel HHJ61_03275 PF03739 Lipopolysaccharide export system permease LptF/LptG HHJ61_03280 PF03739 Lipopolysaccharide export system permease LptF/LptG HHJ61_03285 PF02789 Cytosol aminopeptidase family, N-terminal domain HHJ61_03285 PF00883 Cytosol aminopeptidase family, catalytic domain HHJ61_03300 PF01488 Shikimate / quinate 5-dehydrogenase HHJ61_03300 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HHJ61_03300 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HHJ61_03305 PF16123 Hydroxyacylglutathione hydrolase C-terminus HHJ61_03305 PF00753 Metallo-beta-lactamase superfamily HHJ61_03310 PF08241 Methyltransferase domain HHJ61_03315 PF18381 YcaO cyclodehydratase C-terminal domain HHJ61_03315 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HHJ61_03320 PF06295 Protein of unknown function (DUF1043) HHJ61_03325 PF00268 Ribonucleotide reductase, small chain HHJ61_03340 PF00111 2Fe-2S iron-sulfur cluster binding domain HHJ61_03345 PF05173 Dihydrodipicolinate reductase, C-terminus HHJ61_03345 PF01113 Dihydrodipicolinate reductase, N-terminus HHJ61_03350 PF01810 LysE type translocator HHJ61_03355 PF04608 Phosphatidylglycerophosphatase A HHJ61_03360 PF00586 AIR synthase related protein, N-terminal domain HHJ61_03360 PF02769 AIR synthase related protein, C-terminal domain HHJ61_03365 PF01029 NusB family HHJ61_03370 PF00885 6,7-dimethyl-8-ribityllumazine synthase HHJ61_03375 PF03222 Tryptophan/tyrosine permease family HHJ61_03385 PF00300 Histidine phosphatase superfamily (branch 1) HHJ61_03390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HHJ61_03390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HHJ61_03390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HHJ61_03390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HHJ61_03395 PF00809 Pterin binding enzyme HHJ61_03405 PF13180 PDZ domain HHJ61_03410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HHJ61_03410 PF01872 RibD C-terminal domain HHJ61_03415 PF03477 ATP cone domain HHJ61_03420 PF09313 Domain of unknown function (DUF1971) HHJ61_03420 PF03848 Tellurite resistance protein TehB HHJ61_03450 PF03129 Anticodon binding domain HHJ61_03450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HHJ61_03450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HHJ61_03450 PF02824 TGS domain HHJ61_03455 PF04399 Glutaredoxin 2, C terminal domain HHJ61_03455 PF13417 Glutathione S-transferase, N-terminal domain HHJ61_03495 PF00589 Phage integrase family HHJ61_03495 PF13356 Arm DNA-binding domain HHJ61_03505 PF03881 Fructosamine kinase HHJ61_03515 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) HHJ61_03520 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) HHJ61_03525 PF04851 Type III restriction enzyme, res subunit HHJ61_03525 PF00271 Helicase conserved C-terminal domain HHJ61_03525 PF02151 UvrB/uvrC motif HHJ61_03525 PF12344 Ultra-violet resistance protein B HHJ61_03525 PF17757 UvrB interaction domain HHJ61_03535 PF01699 Sodium/calcium exchanger protein HHJ61_03540 PF03824 High-affinity nickel-transport protein HHJ61_03545 PF06226 Protein of unknown function (DUF1007) HHJ61_03550 PF00005 ABC transporter HHJ61_03550 PF12848 ABC transporter HHJ61_03555 PF01546 Peptidase family M20/M25/M40 HHJ61_03555 PF07687 Peptidase dimerisation domain HHJ61_03565 PF00356 Bacterial regulatory proteins, lacI family HHJ61_03570 PF00294 pfkB family carbohydrate kinase HHJ61_03575 PF01773 Na+ dependent nucleoside transporter N-terminus HHJ61_03575 PF07670 Nucleoside recognition HHJ61_03575 PF07662 Na+ dependent nucleoside transporter C-terminus HHJ61_03580 PF01156 Inosine-uridine preferring nucleoside hydrolase HHJ61_03585 PF00595 PDZ domain HHJ61_03590 PF01027 Inhibitor of apoptosis-promoting Bax1 HHJ61_03595 PF04358 DsrC like protein HHJ61_03600 PF01297 Zinc-uptake complex component A periplasmic HHJ61_03605 PF00005 ABC transporter HHJ61_03610 PF00950 ABC 3 transport family HHJ61_03615 PF00950 ABC 3 transport family HHJ61_03620 PF00561 alpha/beta hydrolase fold HHJ61_03625 PF02698 DUF218 domain HHJ61_03630 PF00356 Bacterial regulatory proteins, lacI family HHJ61_03630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HHJ61_03635 PF00793 DAHP synthetase I family HHJ61_03640 PF12704 MacB-like periplasmic core domain HHJ61_03640 PF02687 FtsX-like permease family HHJ61_03645 PF00005 ABC transporter HHJ61_03650 PF12704 MacB-like periplasmic core domain HHJ61_03650 PF02687 FtsX-like permease family HHJ61_03655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HHJ61_03655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HHJ61_03660 PF00793 DAHP synthetase I family HHJ61_03665 PF13369 Transglutaminase-like superfamily HHJ61_03670 PF13847 Methyltransferase domain HHJ61_03670 PF17827 PrmC N-terminal domain HHJ61_03675 PF06480 FtsH Extracellular HHJ61_03675 PF00004 ATPase family associated with various cellular activities (AAA) HHJ61_03675 PF17862 AAA+ lid domain HHJ61_03675 PF01434 Peptidase family M41 HHJ61_03680 PF01728 FtsJ-like methyltransferase HHJ61_03685 PF12805 FUSC-like inner membrane protein yccS HHJ61_03690 PF02142 MGS-like domain HHJ61_03695 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HHJ61_03700 PF02391 MoaE protein HHJ61_03705 PF02597 ThiS family HHJ61_03710 PF01967 MoaC family HHJ61_03715 PF04055 Radical SAM superfamily HHJ61_03715 PF06463 Molybdenum Cofactor Synthesis C HHJ61_03730 PF13954 PapC N-terminal domain HHJ61_03730 PF00577 Outer membrane usher protein HHJ61_03730 PF13953 PapC C-terminal domain HHJ61_03735 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HHJ61_03735 PF02753 Pili assembly chaperone PapD, C-terminal domain HHJ61_03755 PF03062 MBOAT, membrane-bound O-acyltransferase family HHJ61_03760 PF01227 GTP cyclohydrolase I HHJ61_03765 PF00994 Probable molybdopterin binding domain HHJ61_03765 PF03453 MoeA N-terminal region (domain I and II) HHJ61_03765 PF03454 MoeA C-terminal region (domain IV) HHJ61_03770 PF00899 ThiF family HHJ61_03775 PF03956 Lysine exporter LysO HHJ61_03780 PF00210 Ferritin-like domain HHJ61_03785 PF00210 Ferritin-like domain HHJ61_03795 PF13545 Crp-like helix-turn-helix domain HHJ61_03795 PF00027 Cyclic nucleotide-binding domain HHJ61_03800 PF00582 Universal stress protein family HHJ61_03810 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ61_03810 PF14602 Hexapeptide repeat of succinyl-transferase HHJ61_03810 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HHJ61_03815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ61_03815 PF03466 LysR substrate binding domain HHJ61_03820 PF01479 S4 domain HHJ61_03820 PF00849 RNA pseudouridylate synthase HHJ61_03825 PF01300 Telomere recombination HHJ61_03830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HHJ61_03835 PF04348 LppC putative lipoprotein HHJ61_03840 PF02021 Uncharacterised protein family UPF0102 HHJ61_03845 PF13580 SIS domain HHJ61_03850 PF04972 BON domain HHJ61_03855 PF13361 UvrD-like helicase C-terminal domain HHJ61_03855 PF00580 UvrD/REP helicase N-terminal domain HHJ61_03870 PF01728 FtsJ-like methyltransferase HHJ61_03870 PF18125 RlmM ferredoxin-like domain HHJ61_03875 PF03466 LysR substrate binding domain HHJ61_03875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ61_03880 PF01063 Amino-transferase class IV HHJ61_03885 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin HHJ61_03885 PF03895 YadA-like membrane anchor domain HHJ61_03885 PF05662 Coiled stalk of trimeric autotransporter adhesin HHJ61_03885 PF13018 Extended Signal Peptide of Type V secretion system HHJ61_03895 PF03840 Preprotein translocase SecG subunit HHJ61_03900 PF01131 DNA topoisomerase HHJ61_03900 PF01751 Toprim domain HHJ61_03905 PF02575 YbaB/EbfC DNA-binding family HHJ61_03910 PF13662 Toprim domain HHJ61_03910 PF02132 RecR protein HHJ61_03915 PF01053 Cys/Met metabolism PLP-dependent enzyme HHJ61_03920 PF00578 AhpC/TSA family HHJ61_03920 PF10417 C-terminal domain of 1-Cys peroxiredoxin HHJ61_03925 PF05166 YcgL domain HHJ61_03930 PF01467 Cytidylyltransferase-like HHJ61_03930 PF00294 pfkB family carbohydrate kinase HHJ61_03935 PF03279 Bacterial lipid A biosynthesis acyltransferase HHJ61_03940 PF00753 Metallo-beta-lactamase superfamily HHJ61_03945 PF05951 Bacterial protein of unknown function (DUF882) HHJ61_03950 PF03734 L,D-transpeptidase catalytic domain HHJ61_03955 PF03572 Peptidase family S41 HHJ61_03955 PF00595 PDZ domain HHJ61_03955 PF11818 C-terminal domain of tail specific protease (DUF3340) HHJ61_03955 PF17804 Tail specific protease N-terminal domain HHJ61_03960 PF04352 ProQ/FINO family HHJ61_03960 PF17516 ProQ C-terminal domain HHJ61_03965 PF04403 Paraquat-inducible protein A HHJ61_03970 PF02470 MlaD protein HHJ61_03975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ61_03975 PF00986 DNA gyrase B subunit, carboxyl terminus HHJ61_03975 PF01751 Toprim domain HHJ61_03975 PF00204 DNA gyrase B HHJ61_03980 PF07732 Multicopper oxidase HHJ61_03985 PF00521 DNA gyrase/topoisomerase IV, subunit A HHJ61_03985 PF03989 DNA gyrase C-terminal domain, beta-propeller HHJ61_03990 PF11230 Protein of unknown function (DUF3029) HHJ61_03995 PF04055 Radical SAM superfamily HHJ61_04000 PF03783 Curli production assembly/transport component CsgG HHJ61_04010 PF05643 Putative bacterial lipoprotein (DUF799) HHJ61_04015 PF08272 Topoisomerase I zinc-ribbon-like HHJ61_04015 PF01751 Toprim domain HHJ61_04015 PF01131 DNA topoisomerase HHJ61_04015 PF01396 Topoisomerase DNA binding C4 zinc finger HHJ61_04020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ61_04020 PF03466 LysR substrate binding domain HHJ61_04025 PF01343 Peptidase family S49 HHJ61_04030 PF00881 Nitroreductase family HHJ61_04035 PF02678 Pirin HHJ61_04035 PF05726 Pirin C-terminal cupin domain HHJ61_04045 PF03466 LysR substrate binding domain HHJ61_04045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ61_04050 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HHJ61_04050 PF00056 lactate/malate dehydrogenase, NAD binding domain HHJ61_04055 PF10369 Small subunit of acetolactate synthase HHJ61_04060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HHJ61_04060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HHJ61_04060 PF00205 Thiamine pyrophosphate enzyme, central domain HHJ61_04065 PF03553 Na+/H+ antiporter family HHJ61_04070 PF00816 H-NS histone family HHJ61_04075 PF00575 S1 RNA binding domain HHJ61_04075 PF08206 Ribonuclease B OB domain HHJ61_04075 PF00773 RNB domain HHJ61_04085 PF01784 NIF3 (NGG1p interacting factor 3) HHJ61_04090 PF00356 Bacterial regulatory proteins, lacI family HHJ61_04095 PF00311 Phosphoenolpyruvate carboxylase HHJ61_04100 PF04055 Radical SAM superfamily HHJ61_04100 PF00919 Uncharacterized protein family UPF0004 HHJ61_04100 PF01938 TRAM domain HHJ61_04105 PF01494 FAD binding domain HHJ61_04130 PF00149 Calcineurin-like phosphoesterase HHJ61_04135 PF00293 NUDIX domain HHJ61_04140 PF06146 Phosphate-starvation-inducible E HHJ61_04145 PF02557 D-alanyl-D-alanine carboxypeptidase HHJ61_04150 PF07687 Peptidase dimerisation domain HHJ61_04150 PF01546 Peptidase family M20/M25/M40 HHJ61_04155 PF03960 ArsC family HHJ61_04160 PF02086 D12 class N6 adenine-specific DNA methyltransferase HHJ61_04165 PF05315 ICEA Protein HHJ61_04170 PF01555 DNA methylase HHJ61_04175 PF00291 Pyridoxal-phosphate dependent enzyme HHJ61_04175 PF14821 Threonine synthase N terminus HHJ61_04180 PF08544 GHMP kinases C terminal HHJ61_04180 PF00288 GHMP kinases N terminal domain HHJ61_04185 PF00696 Amino acid kinase family HHJ61_04185 PF03447 Homoserine dehydrogenase, NAD binding domain HHJ61_04185 PF00742 Homoserine dehydrogenase HHJ61_04185 PF13840 ACT domain HHJ61_04185 PF01842 ACT domain HHJ61_04190 PF01168 Alanine racemase, N-terminal domain HHJ61_04195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HHJ61_04200 PF00929 Exonuclease HHJ61_04205 PF03553 Na+/H+ antiporter family HHJ61_04205 PF13726 Na+-H+ antiporter family HHJ61_04210 PF00171 Aldehyde dehydrogenase family HHJ61_04210 PF01619 Proline dehydrogenase HHJ61_04210 PF14850 DNA-binding domain of Proline dehydrogenase HHJ61_04210 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HHJ61_04215 PF00474 Sodium:solute symporter family HHJ61_04220 PF02547 Queuosine biosynthesis protein HHJ61_04225 PF01702 Queuine tRNA-ribosyltransferase HHJ61_04230 PF01814 Hemerythrin HHE cation binding domain HHJ61_04235 PF02699 Preprotein translocase subunit HHJ61_04240 PF02355 Protein export membrane protein HHJ61_04240 PF07549 SecD/SecF GG Motif HHJ61_04240 PF13721 SecD export protein N-terminal TM region HHJ61_04245 PF07549 SecD/SecF GG Motif HHJ61_04245 PF02355 Protein export membrane protein HHJ61_04250 PF14718 Soluble lytic murein transglycosylase L domain HHJ61_04250 PF01464 Transglycosylase SLT domain HHJ61_04255 PF01371 Trp repressor protein HHJ61_04260 PF00912 Transglycosylase HHJ61_04265 PF00106 short chain dehydrogenase HHJ61_04270 PF12832 MFS_1 like family HHJ61_04295 PF13018 Extended Signal Peptide of Type V secretion system HHJ61_04295 PF13332 Hemagglutinin repeat HHJ61_04295 PF05860 haemagglutination activity domain HHJ61_04295 PF04829 Pre-toxin domain with VENN motif HHJ61_04320 PF01555 DNA methylase HHJ61_04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ61_04330 PF03466 LysR substrate binding domain HHJ61_04335 PF08521 Two-component sensor kinase N-terminal HHJ61_04335 PF00512 His Kinase A (phospho-acceptor) domain HHJ61_04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ61_04340 PF00072 Response regulator receiver domain HHJ61_04340 PF00486 Transcriptional regulatory protein, C terminal HHJ61_04345 PF03070 TENA/THI-4/PQQC family HHJ61_04360 PF01757 Acyltransferase family HHJ61_04370 PF02233 NAD(P) transhydrogenase beta subunit HHJ61_04375 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HHJ61_04375 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HHJ61_04375 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HHJ61_04380 PF03749 Sugar fermentation stimulation protein RE domain HHJ61_04380 PF17746 SfsA N-terminal OB domain HHJ61_04390 PF00884 Sulfatase HHJ61_04390 PF16347 Domain of unknown function (DUF4976) HHJ61_04400 PF03102 NeuB family HHJ61_04400 PF08666 SAF domain HHJ61_04405 PF13472 GDSL-like Lipase/Acylhydrolase family HHJ61_04405 PF02348 Cytidylyltransferase HHJ61_04410 PF02350 UDP-N-acetylglucosamine 2-epimerase HHJ61_04415 PF00579 tRNA synthetases class I (W and Y) HHJ61_04415 PF01479 S4 domain HHJ61_04420 PF00294 pfkB family carbohydrate kinase HHJ61_04425 PF08244 Glycosyl hydrolases family 32 C terminal HHJ61_04425 PF00251 Glycosyl hydrolases family 32 N-terminal domain HHJ61_04440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HHJ61_04445 PF01520 N-acetylmuramoyl-L-alanine amidase HHJ61_04445 PF01476 LysM domain HHJ61_04450 PF01119 DNA mismatch repair protein, C-terminal domain HHJ61_04450 PF08676 MutL C terminal dimerisation domain HHJ61_04460 PF17209 Hfq protein HHJ61_04465 PF01926 50S ribosome-binding GTPase HHJ61_04465 PF16360 GTP-binding GTPase Middle Region HHJ61_04465 PF13167 GTP-binding GTPase N-terminal HHJ61_04470 PF00860 Permease family HHJ61_04475 PF04269 Protein of unknown function, DUF440 HHJ61_04490 PF01926 50S ribosome-binding GTPase HHJ61_04490 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HHJ61_04500 PF03981 Ubiquinol-cytochrome C chaperone HHJ61_04500 PF13099 Domain of unknown function (DUF3944) HHJ61_04535 PF13280 WYL domain HHJ61_04535 PF08279 HTH domain HHJ61_04545 PF07445 Primosomal replication protein priC HHJ61_04550 PF02678 Pirin HHJ61_04550 PF17954 Quercetinase C-terminal cupin domain HHJ61_04555 PF13406 Transglycosylase SLT domain HHJ61_04560 PF00535 Glycosyl transferase family 2 HHJ61_04565 PF00535 Glycosyl transferase family 2 HHJ61_04575 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) HHJ61_04585 PF04230 Polysaccharide pyruvyl transferase HHJ61_04590 PF02698 DUF218 domain HHJ61_04595 PF00109 Beta-ketoacyl synthase, N-terminal domain HHJ61_04595 PF02801 Beta-ketoacyl synthase, C-terminal domain HHJ61_04600 PF01266 FAD dependent oxidoreductase HHJ61_04600 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HHJ61_04605 PF01588 Putative tRNA binding domain HHJ61_04605 PF09334 tRNA synthetases class I (M) HHJ61_04610 PF10609 NUBPL iron-transfer P-loop NTPase HHJ61_04615 PF03239 Iron permease FTR1 family HHJ61_04620 PF10634 Fe2+ transport protein HHJ61_04630 PF00005 ABC transporter HHJ61_04630 PF02687 FtsX-like permease family HHJ61_04630 PF12704 MacB-like periplasmic core domain HHJ61_04640 PF00005 ABC transporter HHJ61_04645 PF01263 Aldose 1-epimerase HHJ61_04655 PF01336 OB-fold nucleic acid binding domain HHJ61_04655 PF00152 tRNA synthetases class II (D, K and N) HHJ61_04660 PF02661 Fic/DOC family HHJ61_04660 PF12728 Helix-turn-helix domain HHJ61_04670 PF10411 Disulfide bond isomerase protein N-terminus HHJ61_04670 PF13098 Thioredoxin-like domain HHJ61_04675 PF01368 DHH family HHJ61_04675 PF17768 RecJ OB domain HHJ61_04675 PF02272 DHHA1 domain HHJ61_04680 PF01048 Phosphorylase superfamily HHJ61_04685 PF00691 OmpA family HHJ61_04685 PF01389 OmpA-like transmembrane domain HHJ61_04690 PF08274 PhnA Zinc-Ribbon HHJ61_04690 PF03831 PhnA domain HHJ61_04695 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HHJ61_04700 PF00005 ABC transporter HHJ61_04710 PF01032 FecCD transport family HHJ61_04720 PF10670 Domain of unknown function (DUF4198) HHJ61_04725 PF00593 TonB dependent receptor HHJ61_04725 PF07715 TonB-dependent Receptor Plug Domain HHJ61_04730 PF00593 TonB dependent receptor HHJ61_04730 PF07715 TonB-dependent Receptor Plug Domain HHJ61_04735 PF03313 Serine dehydratase alpha chain HHJ61_04745 PF08348 YheO-like PAS domain HHJ61_04745 PF13309 HTH domain HHJ61_04755 PF00224 Pyruvate kinase, barrel domain HHJ61_04755 PF02887 Pyruvate kinase, alpha/beta domain HHJ61_04760 PF00881 Nitroreductase family HHJ61_04765 PF08543 Phosphomethylpyrimidine kinase HHJ61_04770 PF09179 TilS substrate binding domain HHJ61_04770 PF01171 PP-loop family HHJ61_04770 PF11734 TilS substrate C-terminal domain HHJ61_04775 PF00549 CoA-ligase HHJ61_04775 PF02629 CoA binding domain HHJ61_04780 PF00549 CoA-ligase HHJ61_04780 PF08442 ATP-grasp domain HHJ61_04785 PF00364 Biotin-requiring enzyme HHJ61_04785 PF02817 e3 binding domain HHJ61_04785 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HHJ61_04790 PF00676 Dehydrogenase E1 component HHJ61_04790 PF16870 2-oxoglutarate dehydrogenase C-terminal HHJ61_04790 PF02779 Transketolase, pyrimidine binding domain HHJ61_04790 PF16078 2-oxoglutarate dehydrogenase N-terminus HHJ61_04795 PF00285 Citrate synthase, C-terminal domain HHJ61_04805 PF02525 Flavodoxin-like fold HHJ61_04815 PF16200 C-terminal region of band_7 HHJ61_04815 PF01145 SPFH domain / Band 7 family HHJ61_04840 PF01047 MarR family HHJ61_04840 PF00480 ROK family HHJ61_04845 PF01025 GrpE HHJ61_04850 PF01513 ATP-NAD kinase HHJ61_04855 PF02463 RecF/RecN/SMC N terminal domain HHJ61_04860 PF01250 Ribosomal protein S6 HHJ61_04865 PF00436 Single-strand binding protein family HHJ61_04870 PF01084 Ribosomal protein S18 HHJ61_04875 PF03948 Ribosomal protein L9, C-terminal domain HHJ61_04875 PF01281 Ribosomal protein L9, N-terminal domain HHJ61_04880 PF00202 Aminotransferase class-III HHJ61_04885 PF01523 Putative modulator of DNA gyrase HHJ61_04890 PF00575 S1 RNA binding domain HHJ61_04890 PF10150 Ribonuclease E/G family HHJ61_04895 PF08003 Protein of unknown function (DUF1698) HHJ61_04945 PF00953 Glycosyl transferase family 4 HHJ61_04950 PF00202 Aminotransferase class-III HHJ61_04955 PF08335 GlnD PII-uridylyltransferase HHJ61_04955 PF01966 HD domain HHJ61_04960 PF00557 Metallopeptidase family M24 HHJ61_04965 PF01521 Iron-sulphur cluster biosynthesis HHJ61_04970 PF06062 Uncharacterised protein family (UPF0231) HHJ61_04975 PF14814 Bifunctional transglycosylase second domain HHJ61_04975 PF00912 Transglycosylase HHJ61_04975 PF00905 Penicillin binding protein transpeptidase domain HHJ61_04985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HHJ61_04990 PF04304 Protein of unknown function (DUF454) HHJ61_04995 PF01432 Peptidase family M3 HHJ61_05000 PF00152 tRNA synthetases class II (D, K and N) HHJ61_05005 PF02910 Fumarate reductase flavoprotein C-term HHJ61_05005 PF00890 FAD binding domain HHJ61_05010 PF13085 2Fe-2S iron-sulfur cluster binding domain HHJ61_05010 PF13183 4Fe-4S dicluster domain HHJ61_05015 PF02300 Fumarate reductase subunit C HHJ61_05020 PF02313 Fumarate reductase subunit D HHJ61_05025 PF01170 Putative RNA methylase family UPF0020 HHJ61_05025 PF02926 THUMP domain HHJ61_05025 PF10672 S-adenosylmethionine-dependent methyltransferase HHJ61_05030 PF01297 Zinc-uptake complex component A periplasmic HHJ61_05035 PF00899 ThiF family HHJ61_05040 PF06725 3D domain HHJ61_05040 PF03562 MltA specific insert domain HHJ61_05055 PF00313 'Cold-shock' DNA-binding domain HHJ61_05060 PF01225 Mur ligase family, catalytic domain HHJ61_05060 PF08245 Mur ligase middle domain HHJ61_05060 PF02875 Mur ligase family, glutamate ligase domain HHJ61_05065 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HHJ61_05070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HHJ61_05075 PF01722 BolA-like protein HHJ61_05080 PF13466 STAS domain HHJ61_05085 PF05494 MlaC protein HHJ61_05090 PF02470 MlaD protein HHJ61_05095 PF02405 Permease MlaE HHJ61_05100 PF00005 ABC transporter HHJ61_05110 PF06835 Lipopolysaccharide-assembly, LptC-related HHJ61_05115 PF03968 OstA-like protein HHJ61_05120 PF12399 Branched-chain amino acid ATP-binding cassette transporter HHJ61_05120 PF00005 ABC transporter HHJ61_05125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ61_05135 PF03786 D-mannonate dehydratase (UxuA) HHJ61_05140 PF07729 FCD domain HHJ61_05140 PF00392 Bacterial regulatory proteins, gntR family HHJ61_05145 PF16338 Domain of unknown function (DUF4968) HHJ61_05145 PF01055 Glycosyl hydrolases family 31 HHJ61_05145 PF17137 Domain of unknown function (DUF5110) HHJ61_05145 PF13802 Galactose mutarotase-like HHJ61_05150 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HHJ61_05155 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HHJ61_05165 PF03480 Bacterial extracellular solute-binding protein, family 7 HHJ61_05170 PF00106 short chain dehydrogenase HHJ61_05175 PF02614 Glucuronate isomerase HHJ61_05185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HHJ61_05190 PF00155 Aminotransferase class I and II HHJ61_05195 PF00266 Aminotransferase class-V HHJ61_05200 PF04363 Protein of unknown function (DUF496) HHJ61_05205 PF13018 Extended Signal Peptide of Type V secretion system HHJ61_05205 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin HHJ61_05205 PF05662 Coiled stalk of trimeric autotransporter adhesin HHJ61_05205 PF03895 YadA-like membrane anchor domain HHJ61_05210 PF02378 Phosphotransferase system, EIIC HHJ61_05210 PF00367 phosphotransferase system, EIIB HHJ61_05215 PF05191 Adenylate kinase, active site lid HHJ61_05220 PF00561 alpha/beta hydrolase fold HHJ61_05225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HHJ61_05225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HHJ61_05225 PF16582 Middle domain of thiamine pyrophosphate HHJ61_05230 PF00425 chorismate binding enzyme HHJ61_05235 PF00155 Aminotransferase class I and II HHJ61_05240 PF07840 FadR C-terminal domain HHJ61_05240 PF00392 Bacterial regulatory proteins, gntR family HHJ61_05245 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HHJ61_05250 PF02600 Disulfide bond formation protein DsbB HHJ61_05255 PF03741 Integral membrane protein TerC family HHJ61_05260 PF02976 DNA mismatch repair enzyme MutH HHJ61_05265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HHJ61_05265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HHJ61_05270 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HHJ61_05280 PF03458 UPF0126 domain HHJ61_05285 PF00171 Aldehyde dehydrogenase family HHJ61_05290 PF01842 ACT domain HHJ61_05290 PF00696 Amino acid kinase family HHJ61_05295 PF00581 Rhodanese-like domain HHJ61_05300 PF04143 Sulphur transport HHJ61_05305 PF00709 Adenylosuccinate synthetase HHJ61_05320 PF01791 DeoC/LacD family aldolase HHJ61_05325 PF01979 Amidohydrolase family HHJ61_05330 PF08220 DeoR-like helix-turn-helix domain HHJ61_05330 PF00455 DeoR C terminal sensor domain HHJ61_05340 PF00884 Sulfatase HHJ61_05345 PF04055 Radical SAM superfamily HHJ61_05345 PF13186 Iron-sulfur cluster-binding domain HHJ61_05355 PF07470 Glycosyl Hydrolase Family 88 HHJ61_05360 PF03830 PTS system sorbose subfamily IIB component HHJ61_05360 PF03610 PTS system fructose IIA component HHJ61_05365 PF03613 PTS system mannose/fructose/sorbose family IID component HHJ61_05370 PF03609 PTS system sorbose-specific iic component HHJ61_05375 PF03830 PTS system sorbose subfamily IIB component HHJ61_05380 PF01380 SIS domain HHJ61_05385 PF08013 Tagatose 6 phosphate kinase HHJ61_05390 PF00884 Sulfatase HHJ61_05405 PF01614 Bacterial transcriptional regulator HHJ61_05405 PF09339 IclR helix-turn-helix domain HHJ61_05410 PF00294 pfkB family carbohydrate kinase HHJ61_05415 PF01081 KDPG and KHG aldolase HHJ61_05420 PF03009 Glycerophosphoryl diester phosphodiesterase family HHJ61_05425 PF08402 TOBE domain HHJ61_05425 PF00005 ABC transporter HHJ61_05430 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_05435 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_05445 PF00328 Histidine phosphatase superfamily (branch 2) HHJ61_05455 PF08207 Elongation factor P (EF-P) KOW-like domain HHJ61_05455 PF01132 Elongation factor P (EF-P) OB domain HHJ61_05455 PF09285 Elongation factor P, C-terminal HHJ61_05460 PF04055 Radical SAM superfamily HHJ61_05465 PF04225 Opacity-associated protein A LysM-like domain HHJ61_05465 PF08525 Opacity-associated protein A N-terminal motif HHJ61_05470 PF04381 Putative exonuclease, RdgC HHJ61_05475 PF03807 NADP oxidoreductase coenzyme F420-dependent HHJ61_05475 PF14748 Pyrroline-5-carboxylate reductase dimerisation HHJ61_05480 PF12832 MFS_1 like family HHJ61_05485 PF00589 Phage integrase family HHJ61_05485 PF02899 Phage integrase, N-terminal SAM-like domain HHJ61_05490 PF01817 Chorismate mutase type II HHJ61_05490 PF00800 Prephenate dehydratase HHJ61_05495 PF08240 Alcohol dehydrogenase GroES-like domain HHJ61_05495 PF14765 Polyketide synthase dehydratase HHJ61_05495 PF00550 Phosphopantetheine attachment site HHJ61_05495 PF08659 KR domain HHJ61_05495 PF00698 Acyl transferase domain HHJ61_05495 PF16197 Ketoacyl-synthetase C-terminal extension HHJ61_05495 PF00109 Beta-ketoacyl synthase, N-terminal domain HHJ61_05495 PF02801 Beta-ketoacyl synthase, C-terminal domain HHJ61_05495 PF00107 Zinc-binding dehydrogenase HHJ61_05510 PF00106 short chain dehydrogenase HHJ61_05515 PF01965 DJ-1/PfpI family HHJ61_05525 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HHJ61_05530 PF00091 Tubulin/FtsZ family, GTPase domain HHJ61_05530 PF12327 FtsZ family, C-terminal domain HHJ61_05535 PF02491 SHS2 domain inserted in FTSA HHJ61_05540 PF03799 Cell division protein FtsQ HHJ61_05540 PF08478 POTRA domain, FtsQ-type HHJ61_05545 PF07478 D-ala D-ala ligase C-terminus HHJ61_05545 PF01820 D-ala D-ala ligase N-terminus HHJ61_05550 PF01225 Mur ligase family, catalytic domain HHJ61_05550 PF08245 Mur ligase middle domain HHJ61_05550 PF02875 Mur ligase family, glutamate ligase domain HHJ61_05555 PF03033 Glycosyltransferase family 28 N-terminal domain HHJ61_05555 PF04101 Glycosyltransferase family 28 C-terminal domain HHJ61_05560 PF01098 Cell cycle protein HHJ61_05565 PF08245 Mur ligase middle domain HHJ61_05565 PF02875 Mur ligase family, glutamate ligase domain HHJ61_05570 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HHJ61_05570 PF00953 Glycosyl transferase family 4 HHJ61_05575 PF02875 Mur ligase family, glutamate ligase domain HHJ61_05575 PF01225 Mur ligase family, catalytic domain HHJ61_05575 PF08245 Mur ligase middle domain HHJ61_05580 PF08245 Mur ligase middle domain HHJ61_05580 PF02875 Mur ligase family, glutamate ligase domain HHJ61_05580 PF01225 Mur ligase family, catalytic domain HHJ61_05585 PF00905 Penicillin binding protein transpeptidase domain HHJ61_05585 PF03717 Penicillin-binding Protein dimerisation domain HHJ61_05590 PF04999 Cell division protein FtsL HHJ61_05595 PF01795 MraW methylase family HHJ61_05600 PF02381 MraZ protein, putative antitoxin-like HHJ61_05610 PF05127 Helicase HHJ61_05610 PF17176 tRNA-binding domain HHJ61_05610 PF13718 GNAT acetyltransferase 2 HHJ61_05615 PF02130 Uncharacterized protein family UPF0054 HHJ61_05620 PF02562 PhoH-like protein HHJ61_05625 PF00149 Calcineurin-like phosphoesterase HHJ61_05630 PF01553 Acyltransferase HHJ61_05635 PF07732 Multicopper oxidase HHJ61_05640 PF13230 Glutamine amidotransferases class-II HHJ61_05645 PF03222 Tryptophan/tyrosine permease family HHJ61_05650 PF03313 Serine dehydratase alpha chain HHJ61_05650 PF03315 Serine dehydratase beta chain HHJ61_05655 PF01578 Cytochrome C assembly protein HHJ61_05655 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HHJ61_05660 PF08534 Redoxin HHJ61_05665 PF03918 Cytochrome C biogenesis protein HHJ61_05670 PF03918 Cytochrome C biogenesis protein HHJ61_05680 PF07733 Bacterial DNA polymerase III alpha NTPase domain HHJ61_05680 PF01336 OB-fold nucleic acid binding domain HHJ61_05680 PF14579 Helix-hairpin-helix motif HHJ61_05680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HHJ61_05680 PF02811 PHP domain HHJ61_05685 PF03916 Polysulphide reductase, NrfD HHJ61_05690 PF13247 4Fe-4S dicluster domain HHJ61_05700 PF02335 Cytochrome c552 HHJ61_05705 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HHJ61_05705 PF04055 Radical SAM superfamily HHJ61_05710 PF03099 Biotin/lipoate A/B protein ligase family HHJ61_05715 PF04359 Protein of unknown function (DUF493) HHJ61_05720 PF00768 D-alanyl-D-alanine carboxypeptidase HHJ61_05720 PF07943 Penicillin-binding protein 5, C-terminal domain HHJ61_05725 PF05036 Sporulation related domain HHJ61_05725 PF03330 Lytic transglycolase HHJ61_05730 PF01098 Cell cycle protein HHJ61_05735 PF03717 Penicillin-binding Protein dimerisation domain HHJ61_05735 PF00905 Penicillin binding protein transpeptidase domain HHJ61_05740 PF02590 Predicted SPOUT methyltransferase HHJ61_05750 PF00270 DEAD/DEAH box helicase HHJ61_05750 PF00271 Helicase conserved C-terminal domain HHJ61_05755 PF07497 Rho termination factor, RNA-binding domain HHJ61_05755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HHJ61_05755 PF07498 Rho termination factor, N-terminal domain HHJ61_05760 PF07690 Major Facilitator Superfamily HHJ61_05770 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) HHJ61_05775 PF00485 Phosphoribulokinase / Uridine kinase family HHJ61_05780 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_05785 PF08402 TOBE domain HHJ61_05785 PF00005 ABC transporter HHJ61_05810 PF00462 Glutaredoxin HHJ61_05825 PF04011 LemA family HHJ61_05830 PF01389 OmpA-like transmembrane domain HHJ61_05830 PF00691 OmpA family HHJ61_05835 PF01565 FAD binding domain HHJ61_05835 PF02913 FAD linked oxidases, C-terminal domain HHJ61_05835 PF13183 4Fe-4S dicluster domain HHJ61_05840 PF03061 Thioesterase superfamily HHJ61_05845 PF00762 Ferrochelatase HHJ61_05850 PF03922 OmpW family HHJ61_05860 PF04279 Intracellular septation protein A HHJ61_05865 PF03061 Thioesterase superfamily HHJ61_05870 PF03795 YCII-related domain HHJ61_05875 PF06434 Aconitate hydratase 2 N-terminus HHJ61_05875 PF00330 Aconitase family (aconitate hydratase) HHJ61_05875 PF11791 Aconitate B N-terminal domain HHJ61_05880 PF09157 Pseudouridine synthase II TruB, C-terminal HHJ61_05880 PF16198 tRNA pseudouridylate synthase B C-terminal domain HHJ61_05880 PF01509 TruB family pseudouridylate synthase (N terminal domain) HHJ61_05885 PF02033 Ribosome-binding factor A HHJ61_05890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HHJ61_05890 PF00529 HlyD membrane-fusion protein of T1SS HHJ61_05895 PF11742 Protein of unknown function (DUF3302) HHJ61_05900 PF11987 Translation-initiation factor 2 HHJ61_05900 PF08364 Bacterial translation initiation factor IF-2 associated region HHJ61_05900 PF00009 Elongation factor Tu GTP binding domain HHJ61_05900 PF04760 Translation initiation factor IF-2, N-terminal region HHJ61_05905 PF00575 S1 RNA binding domain HHJ61_05905 PF08529 NusA N-terminal domain HHJ61_05905 PF13184 NusA-like KH domain HHJ61_05910 PF02576 RimP N-terminal domain HHJ61_05910 PF17384 RimP C-terminal SH3 domain HHJ61_05925 PF01235 Sodium:alanine symporter family HHJ61_05940 PF00480 ROK family HHJ61_05945 PF01569 PAP2 superfamily HHJ61_05950 PF00925 GTP cyclohydrolase II HHJ61_05965 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HHJ61_05975 PF00677 Lumazine binding domain HHJ61_05980 PF01554 MatE HHJ61_05985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HHJ61_05985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HHJ61_05990 PF01386 Ribosomal L25p family HHJ61_05995 PF09335 SNARE associated Golgi protein HHJ61_06000 PF08459 UvrC Helix-hairpin-helix N-terminal HHJ61_06000 PF02151 UvrB/uvrC motif HHJ61_06000 PF01541 GIY-YIG catalytic domain HHJ61_06005 PF00005 ABC transporter HHJ61_06010 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_06015 PF09084 NMT1/THI5 like HHJ61_06020 PF02348 Cytidylyltransferase HHJ61_06025 PF03966 Trm112p-like protein HHJ61_06030 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HHJ61_06035 PF00664 ABC transporter transmembrane region HHJ61_06035 PF00005 ABC transporter HHJ61_06040 PF03772 Competence protein HHJ61_06040 PF13567 Domain of unknown function (DUF4131) HHJ61_06040 PF00753 Metallo-beta-lactamase superfamily HHJ61_06045 PF02110 Hydroxyethylthiazole kinase family HHJ61_06050 PF08543 Phosphomethylpyrimidine kinase HHJ61_06055 PF02581 Thiamine monophosphate synthase HHJ61_06065 PF02395 Immunoglobulin A1 protease HHJ61_06065 PF03212 Pertactin HHJ61_06065 PF03797 Autotransporter beta-domain HHJ61_06070 PF18073 Rubredoxin metal binding domain HHJ61_06075 PF01928 CYTH domain HHJ61_06080 PF01865 Protein of unknown function DUF47 HHJ61_06085 PF01384 Phosphate transporter family HHJ61_06090 PF00484 Carbonic anhydrase HHJ61_06095 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HHJ61_06095 PF02222 ATP-grasp domain HHJ61_06100 PF00155 Aminotransferase class I and II HHJ61_06105 PF00312 Ribosomal protein S15 HHJ61_06110 PF05651 Putative sugar diacid recognition HHJ61_06110 PF17853 GGDEF-like domain HHJ61_06110 PF13556 PucR C-terminal helix-turn-helix domain HHJ61_06115 PF02447 GntP family permease HHJ61_06120 PF02595 Glycerate kinase family HHJ61_06125 PF17864 RuvB AAA lid domain HHJ61_06125 PF05496 Holliday junction DNA helicase RuvB P-loop domain HHJ61_06125 PF05491 RuvB C-terminal winged helix domain HHJ61_06130 PF07499 RuvA, C-terminal domain HHJ61_06130 PF01330 RuvA N terminal domain HHJ61_06135 PF02075 Crossover junction endodeoxyribonuclease RuvC HHJ61_06140 PF01709 Transcriptional regulator HHJ61_06145 PF00293 NUDIX domain HHJ61_06150 PF00152 tRNA synthetases class II (D, K and N) HHJ61_06150 PF02938 GAD domain HHJ61_06150 PF01336 OB-fold nucleic acid binding domain HHJ61_06155 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HHJ61_06160 PF04221 RelB antitoxin HHJ61_06165 PF13649 Methyltransferase domain HHJ61_06175 PF13609 Gram-negative porin HHJ61_06180 PF13609 Gram-negative porin HHJ61_06190 PF00375 Sodium:dicarboxylate symporter family HHJ61_06195 PF00717 Peptidase S24-like HHJ61_06205 PF00342 Phosphoglucose isomerase HHJ61_06210 PF00842 Alanine racemase, C-terminal domain HHJ61_06210 PF01168 Alanine racemase, N-terminal domain HHJ61_06215 PF00772 DnaB-like helicase N terminal domain HHJ61_06215 PF03796 DnaB-like helicase C terminal domain HHJ61_06220 PF06185 YecM protein HHJ61_06225 PF05746 DALR anticodon binding domain HHJ61_06225 PF03485 Arginyl tRNA synthetase N terminal domain HHJ61_06225 PF00750 tRNA synthetases class I (R) HHJ61_06230 PF00005 ABC transporter HHJ61_06230 PF03459 TOBE domain HHJ61_06235 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_06245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ61_06245 PF03459 TOBE domain HHJ61_06250 PF03616 Sodium/glutamate symporter HHJ61_06255 PF09093 Lyase, catalytic HHJ61_06255 PF02278 Polysaccharide lyase family 8, super-sandwich domain HHJ61_06255 PF09092 Lyase, N terminal HHJ61_06255 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain HHJ61_06265 PF01925 Sulfite exporter TauE/SafE HHJ61_06270 PF00027 Cyclic nucleotide-binding domain HHJ61_06275 PF06968 Biotin and Thiamin Synthesis associated domain HHJ61_06275 PF04055 Radical SAM superfamily HHJ61_06280 PF00005 ABC transporter HHJ61_06285 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_06295 PF03710 Glutamate-ammonia ligase adenylyltransferase HHJ61_06295 PF08335 GlnD PII-uridylyltransferase HHJ61_06300 PF01546 Peptidase family M20/M25/M40 HHJ61_06300 PF07687 Peptidase dimerisation domain HHJ61_06305 PF00005 ABC transporter HHJ61_06305 PF08402 TOBE domain HHJ61_06310 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_06315 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_06320 PF13416 Bacterial extracellular solute-binding protein HHJ61_06330 PF01638 HxlR-like helix-turn-helix HHJ61_06335 PF00390 Malic enzyme, N-terminal domain HHJ61_06335 PF03949 Malic enzyme, NAD binding domain HHJ61_06345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HHJ61_06345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HHJ61_06350 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_06355 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_06365 PF03459 TOBE domain HHJ61_06365 PF17912 MalK OB fold domain HHJ61_06365 PF00005 ABC transporter HHJ61_06370 PF07729 FCD domain HHJ61_06370 PF00392 Bacterial regulatory proteins, gntR family HHJ61_06375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HHJ61_06375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HHJ61_06380 PF02554 Carbon starvation protein CstA HHJ61_06385 PF12170 DNA polymerase III tau subunit V interacting with alpha HHJ61_06385 PF12169 DNA polymerase III subunits gamma and tau domain III HHJ61_06390 PF00156 Phosphoribosyl transferase domain HHJ61_06395 PF03279 Bacterial lipid A biosynthesis acyltransferase HHJ61_06400 PF01925 Sulfite exporter TauE/SafE HHJ61_06405 PF03411 Penicillin-insensitive murein endopeptidase HHJ61_06410 PF01264 Chorismate synthase HHJ61_06415 PF12794 Mechanosensitive ion channel inner membrane domain 1 HHJ61_06415 PF12795 Mechanosensitive ion channel porin domain HHJ61_06415 PF00924 Mechanosensitive ion channel HHJ61_06420 PF00501 AMP-binding enzyme HHJ61_06425 PF17206 SeqA protein N-terminal domain HHJ61_06425 PF03925 SeqA protein C-terminal domain HHJ61_06430 PF00561 alpha/beta hydrolase fold HHJ61_06435 PF01402 Ribbon-helix-helix protein, copG family HHJ61_06440 PF00258 Flavodoxin HHJ61_06445 PF01475 Ferric uptake regulator family HHJ61_06455 PF00521 DNA gyrase/topoisomerase IV, subunit A HHJ61_06455 PF03989 DNA gyrase C-terminal domain, beta-propeller HHJ61_06460 PF04247 Invasion gene expression up-regulator, SirB HHJ61_06470 PF00893 Small Multidrug Resistance protein HHJ61_06475 PF00106 short chain dehydrogenase HHJ61_06485 PF01965 DJ-1/PfpI family HHJ61_06500 PF07690 Major Facilitator Superfamily HHJ61_06515 PF02525 Flavodoxin-like fold HHJ61_06520 PF01066 CDP-alcohol phosphatidyltransferase HHJ61_06525 PF08264 Anticodon-binding domain of tRNA HHJ61_06525 PF10458 Valyl tRNA synthetase tRNA binding arm HHJ61_06525 PF00133 tRNA synthetases class I (I, L, M and V) HHJ61_06535 PF00145 C-5 cytosine-specific DNA methylase HHJ61_06540 PF06414 Zeta toxin HHJ61_06550 PF13673 Acetyltransferase (GNAT) domain HHJ61_06555 PF04364 DNA polymerase III chi subunit, HolC HHJ61_06560 PF10415 Fumarase C C-terminus HHJ61_06560 PF00206 Lyase HHJ61_06565 PF00425 chorismate binding enzyme HHJ61_06565 PF04715 Anthranilate synthase component I, N terminal region HHJ61_06570 PF00117 Glutamine amidotransferase class-I HHJ61_06575 PF14552 Tautomerase enzyme HHJ61_06580 PF00591 Glycosyl transferase family, a/b domain HHJ61_06580 PF02885 Glycosyl transferase family, helical bundle domain HHJ61_06585 PF00218 Indole-3-glycerol phosphate synthase HHJ61_06585 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HHJ61_06590 PF00291 Pyridoxal-phosphate dependent enzyme HHJ61_06595 PF00290 Tryptophan synthase alpha chain HHJ61_06600 PF07411 Domain of unknown function (DUF1508) HHJ61_06610 PF03099 Biotin/lipoate A/B protein ligase family HHJ61_06610 PF02237 Biotin protein ligase C terminal domain HHJ61_06615 PF00478 IMP dehydrogenase / GMP reductase domain HHJ61_06615 PF00571 CBS domain HHJ61_06630 PF00958 GMP synthase C terminal domain HHJ61_06630 PF00117 Glutamine amidotransferase class-I HHJ61_06630 PF02540 NAD synthase HHJ61_06635 PF13356 Arm DNA-binding domain HHJ61_06635 PF14659 Phage integrase, N-terminal SAM-like domain HHJ61_06635 PF00589 Phage integrase family HHJ61_06670 PF09669 Phage regulatory protein Rha (Phage_pRha) HHJ61_06670 PF10549 ORF11CD3 domain HHJ61_06695 PF00182 Chitinase class I HHJ61_06720 PF03099 Biotin/lipoate A/B protein ligase family HHJ61_06720 PF00293 NUDIX domain HHJ61_06880 PF01695 IstB-like ATP binding protein HHJ61_06905 PF01726 LexA DNA binding domain HHJ61_06905 PF00717 Peptidase S24-like HHJ61_06920 PF07411 Domain of unknown function (DUF1508) HHJ61_06970 PF00436 Single-strand binding protein family HHJ61_06985 PF04381 Putative exonuclease, RdgC HHJ61_07030 PF00145 C-5 cytosine-specific DNA methylase HHJ61_07050 PF14256 YwiC-like protein HHJ61_07055 PF01042 Endoribonuclease L-PSP HHJ61_07060 PF03372 Endonuclease/Exonuclease/phosphatase family HHJ61_07065 PF00999 Sodium/hydrogen exchanger family HHJ61_07075 PF03412 Peptidase C39 family HHJ61_07075 PF00005 ABC transporter HHJ61_07075 PF00664 ABC transporter transmembrane region HHJ61_07140 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HHJ61_07140 PF01276 Orn/Lys/Arg decarboxylase, major domain HHJ61_07140 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HHJ61_07145 PF13520 Amino acid permease HHJ61_07150 PF04284 Protein of unknown function (DUF441) HHJ61_07155 PF00403 Heavy-metal-associated domain HHJ61_07165 PF02634 FdhD/NarQ family HHJ61_07175 PF13247 4Fe-4S dicluster domain HHJ61_07175 PF09163 Formate dehydrogenase N, transmembrane HHJ61_07180 PF01292 Prokaryotic cytochrome b561 HHJ61_07185 PF04216 Protein involved in formate dehydrogenase formation HHJ61_07195 PF00593 TonB dependent receptor HHJ61_07195 PF07715 TonB-dependent Receptor Plug Domain HHJ61_07200 PF05437 Branched-chain amino acid transport protein (AzlD) HHJ61_07205 PF03591 AzlC protein HHJ61_07210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ61_07210 PF03466 LysR substrate binding domain HHJ61_07215 PF01717 Cobalamin-independent synthase, Catalytic domain HHJ61_07215 PF08267 Cobalamin-independent synthase, N-terminal domain HHJ61_07220 PF00939 Sodium:sulfate symporter transmembrane region HHJ61_07230 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HHJ61_07230 PF00271 Helicase conserved C-terminal domain HHJ61_07230 PF04408 Helicase associated domain (HA2) HHJ61_07230 PF11898 Domain of unknown function (DUF3418) HHJ61_07230 PF00270 DEAD/DEAH box helicase HHJ61_07235 PF00453 Ribosomal protein L20 HHJ61_07240 PF01632 Ribosomal protein L35 HHJ61_07245 PF05198 Translation initiation factor IF-3, N-terminal domain HHJ61_07245 PF00707 Translation initiation factor IF-3, C-terminal domain HHJ61_07250 PF01556 DnaJ C terminal domain HHJ61_07250 PF00684 DnaJ central domain HHJ61_07250 PF00226 DnaJ domain HHJ61_07255 PF00012 Hsp70 protein HHJ61_07260 PF00950 ABC 3 transport family HHJ61_07265 PF00005 ABC transporter HHJ61_07270 PF01551 Peptidase family M23 HHJ61_07270 PF04225 Opacity-associated protein A LysM-like domain HHJ61_07275 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HHJ61_07280 PF01668 SmpB protein HHJ61_07285 PF13742 OB-fold nucleic acid binding domain HHJ61_07285 PF02601 Exonuclease VII, large subunit HHJ61_07290 PF08007 Cupin superfamily protein HHJ61_07295 PF03658 RnfH family Ubiquitin HHJ61_07300 PF03364 Polyketide cyclase / dehydrase and lipid transport HHJ61_07305 PF01195 Peptidyl-tRNA hydrolase HHJ61_07310 PF06071 Protein of unknown function (DUF933) HHJ61_07310 PF01926 50S ribosome-binding GTPase HHJ61_07320 PF13520 Amino acid permease HHJ61_07325 PF00158 Sigma-54 interaction domain HHJ61_07325 PF18024 Helix-turn-helix domain HHJ61_07330 PF05128 Domain of unknown function (DUF697) HHJ61_07335 PF04317 YcjX-like family, DUF463 HHJ61_07340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HHJ61_07345 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_07350 PF12911 N-terminal TM domain of oligopeptide transport permease C HHJ61_07350 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_07355 PF00005 ABC transporter HHJ61_07355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HHJ61_07360 PF00005 ABC transporter HHJ61_07365 PF00444 Ribosomal protein L36 HHJ61_07370 PF01197 Ribosomal protein L31 HHJ61_07375 PF02683 Cytochrome C biogenesis protein transmembrane region HHJ61_07375 PF00085 Thioredoxin HHJ61_07375 PF11412 Disulphide bond corrector protein DsbC HHJ61_07385 PF07681 DoxX HHJ61_07390 PF01808 AICARFT/IMPCHase bienzyme HHJ61_07390 PF02142 MGS-like domain HHJ61_07400 PF02844 Phosphoribosylglycinamide synthetase, N domain HHJ61_07400 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HHJ61_07400 PF02843 Phosphoribosylglycinamide synthetase, C domain HHJ61_07405 PF00464 Serine hydroxymethyltransferase HHJ61_07410 PF00486 Transcriptional regulatory protein, C terminal HHJ61_07410 PF00072 Response regulator receiver domain HHJ61_07415 PF03550 Outer membrane lipoprotein LolB HHJ61_07420 PF00288 GHMP kinases N terminal domain HHJ61_07420 PF08544 GHMP kinases C terminal HHJ61_07425 PF14572 Phosphoribosyl synthetase-associated domain HHJ61_07425 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HHJ61_07430 PF01253 Translation initiation factor SUI1 HHJ61_07435 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HHJ61_07440 PF18073 Rubredoxin metal binding domain HHJ61_07445 PF06305 Lipopolysaccharide assembly protein A domain HHJ61_07450 PF00216 Bacterial DNA-binding protein HHJ61_07455 PF00575 S1 RNA binding domain HHJ61_07460 PF02224 Cytidylate kinase HHJ61_07470 PF00675 Insulinase (Peptidase family M16) HHJ61_07470 PF05193 Peptidase M16 inactive domain HHJ61_07475 PF04393 Protein of unknown function (DUF535) HHJ61_07480 PF00764 Arginosuccinate synthase HHJ61_07485 PF01370 NAD dependent epimerase/dehydratase family HHJ61_07500 PF01259 SAICAR synthetase HHJ61_07505 PF16658 Class II release factor RF3, C-terminal domain HHJ61_07505 PF03144 Elongation factor Tu domain 2 HHJ61_07505 PF00009 Elongation factor Tu GTP binding domain HHJ61_07510 PF00889 Elongation factor TS HHJ61_07515 PF00318 Ribosomal protein S2 HHJ61_07520 PF13145 PPIC-type PPIASE domain HHJ61_07525 PF05362 Lon protease (S16) C-terminal proteolytic domain HHJ61_07525 PF02190 ATP-dependent protease La (LON) substrate-binding domain HHJ61_07525 PF00004 ATPase family associated with various cellular activities (AAA) HHJ61_07530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HHJ61_07530 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ61_07535 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HHJ61_07540 PF06804 NlpB/DapX lipoprotein HHJ61_07545 PF00701 Dihydrodipicolinate synthetase family HHJ61_07550 PF00578 AhpC/TSA family HHJ61_07555 PF00465 Iron-containing alcohol dehydrogenase HHJ61_07555 PF00171 Aldehyde dehydrogenase family HHJ61_07560 PF00717 Peptidase S24-like HHJ61_07560 PF01726 LexA DNA binding domain HHJ61_07565 PF01553 Acyltransferase HHJ61_07570 PF02462 Opacity family porin protein HHJ61_07575 PF06826 Predicted Permease Membrane Region HHJ61_07575 PF02080 TrkA-C domain HHJ61_07580 PF00005 ABC transporter HHJ61_07580 PF06472 ABC transporter transmembrane region 2 HHJ61_07585 PF08468 Methyltransferase small domain N-terminal HHJ61_07585 PF05175 Methyltransferase small domain HHJ61_07590 PF10063 Uncharacterized integral membrane protein (DUF2301) HHJ61_07595 PF02311 AraC-like ligand binding domain HHJ61_07595 PF12833 Helix-turn-helix domain HHJ61_07600 PF02627 Carboxymuconolactone decarboxylase family HHJ61_07605 PF01235 Sodium:alanine symporter family HHJ61_07615 PF01121 Dephospho-CoA kinase HHJ61_07625 PF00482 Type II secretion system (T2SS), protein F HHJ61_07630 PF03830 PTS system sorbose subfamily IIB component HHJ61_07630 PF03610 PTS system fructose IIA component HHJ61_07635 PF03609 PTS system sorbose-specific iic component HHJ61_07640 PF03613 PTS system mannose/fructose/sorbose family IID component HHJ61_07645 PF06173 Protein of unknown function (DUF986) HHJ61_07650 PF01238 Phosphomannose isomerase type I HHJ61_07655 PF00075 RNase H HHJ61_07660 PF00929 Exonuclease HHJ61_07680 PF00586 AIR synthase related protein, N-terminal domain HHJ61_07680 PF02769 AIR synthase related protein, C-terminal domain HHJ61_07685 PF00551 Formyl transferase HHJ61_07690 PF00156 Phosphoribosyl transferase domain HHJ61_07695 PF00639 PPIC-type PPIASE domain HHJ61_07695 PF09312 SurA N-terminal domain HHJ61_07700 PF00398 Ribosomal RNA adenine dimethylase HHJ61_07705 PF00149 Calcineurin-like phosphoesterase HHJ61_07710 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) HHJ61_07715 PF13603 Leucyl-tRNA synthetase, Domain 2 HHJ61_07715 PF00133 tRNA synthetases class I (I, L, M and V) HHJ61_07715 PF08264 Anticodon-binding domain of tRNA HHJ61_07720 PF04390 Lipopolysaccharide-assembly HHJ61_07725 PF06144 DNA polymerase III, delta subunit HHJ61_07725 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HHJ61_07735 PF01351 Ribonuclease HII HHJ61_07740 PF02684 Lipid-A-disaccharide synthetase HHJ61_07745 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HHJ61_07745 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ61_07750 PF07977 FabA-like domain HHJ61_07755 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ61_07755 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HHJ61_07760 PF03938 Outer membrane protein (OmpH-like) HHJ61_07765 PF01103 Surface antigen HHJ61_07765 PF07244 Surface antigen variable number repeat HHJ61_07770 PF02163 Peptidase family M50 HHJ61_07780 PF01255 Putative undecaprenyl diphosphate synthase HHJ61_07785 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HHJ61_07785 PF13288 DXP reductoisomerase C-terminal domain HHJ61_07785 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HHJ61_07790 PF01765 Ribosome recycling factor HHJ61_07795 PF00696 Amino acid kinase family HHJ61_07800 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HHJ61_07800 PF00437 Type II/IV secretion system protein HHJ61_07805 PF07963 Prokaryotic N-terminal methylation motif HHJ61_07810 PF01510 N-acetylmuramoyl-L-alanine amidase HHJ61_07820 PF00293 NUDIX domain HHJ61_07825 PF01925 Sulfite exporter TauE/SafE HHJ61_07830 PF01790 Prolipoprotein diacylglyceryl transferase HHJ61_07835 PF00303 Thymidylate synthase HHJ61_07840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HHJ61_07845 PF01979 Amidohydrolase family HHJ61_07850 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HHJ61_07855 PF14743 DNA ligase OB-like domain HHJ61_07855 PF01068 ATP dependent DNA ligase domain HHJ61_07865 PF05159 Capsule polysaccharide biosynthesis protein HHJ61_07870 PF05159 Capsule polysaccharide biosynthesis protein HHJ61_07880 PF00535 Glycosyl transferase family 2 HHJ61_07890 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HHJ61_07890 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HHJ61_07890 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HHJ61_07895 PF00535 Glycosyl transferase family 2 HHJ61_07900 PF02563 Polysaccharide biosynthesis/export protein HHJ61_07910 PF01061 ABC-2 type transporter HHJ61_07915 PF00005 ABC transporter HHJ61_07925 PF04055 Radical SAM superfamily HHJ61_07930 PF01242 6-pyruvoyl tetrahydropterin synthase HHJ61_07935 PF06508 Queuosine biosynthesis protein QueC HHJ61_07940 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HHJ61_08090 PF04466 Phage terminase large subunit HHJ61_08090 PF17288 Terminase RNAseH like domain HHJ61_08095 PF03592 Terminase small subunit HHJ61_08120 PF05106 Phage holin family (Lysis protein S) HHJ61_08145 PF02498 BRO family, N-terminal domain HHJ61_08145 PF10548 P22AR C-terminal domain HHJ61_08150 PF05772 NinB protein HHJ61_08205 PF05106 Phage holin family (Lysis protein S) HHJ61_08230 PF03592 Terminase small subunit HHJ61_08235 PF17288 Terminase RNAseH like domain HHJ61_08235 PF04466 Phage terminase large subunit HHJ61_08240 PF06381 Protein of unknown function (DUF1073) HHJ61_08245 PF04233 Phage Mu protein F like protein HHJ61_08255 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) HHJ61_08300 PF10876 Phage tail assemb.y chaperone protein, TAC HHJ61_08330 PF01051 Initiator Replication protein HHJ61_08400 PF01546 Peptidase family M20/M25/M40 HHJ61_08400 PF07687 Peptidase dimerisation domain HHJ61_08405 PF01118 Semialdehyde dehydrogenase, NAD binding domain HHJ61_08405 PF02774 Semialdehyde dehydrogenase, dimerisation domain HHJ61_08410 PF00696 Amino acid kinase family HHJ61_08415 PF00206 Lyase HHJ61_08415 PF14698 Argininosuccinate lyase C-terminal HHJ61_08425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ61_08425 PF00512 His Kinase A (phospho-acceptor) domain HHJ61_08425 PF08521 Two-component sensor kinase N-terminal HHJ61_08430 PF00486 Transcriptional regulatory protein, C terminal HHJ61_08430 PF00072 Response regulator receiver domain HHJ61_08440 PF02401 LytB protein HHJ61_08445 PF01252 Signal peptidase (SPase) II HHJ61_08450 PF08264 Anticodon-binding domain of tRNA HHJ61_08450 PF00133 tRNA synthetases class I (I, L, M and V) HHJ61_08455 PF01687 Riboflavin kinase HHJ61_08455 PF06574 FAD synthetase HHJ61_08460 PF10396 GTP-binding protein TrmE N-terminus HHJ61_08460 PF01926 50S ribosome-binding GTPase HHJ61_08460 PF12631 MnmE helical domain HHJ61_08470 PF00210 Ferritin-like domain HHJ61_08475 PF00117 Glutamine amidotransferase class-I HHJ61_08480 PF00425 chorismate binding enzyme HHJ61_08485 PF01063 Amino-transferase class IV HHJ61_08505 PF01042 Endoribonuclease L-PSP HHJ61_08510 PF01810 LysE type translocator HHJ61_08515 PF00834 Ribulose-phosphate 3 epimerase family HHJ61_08520 PF13419 Haloacid dehalogenase-like hydrolase HHJ61_08525 PF00579 tRNA synthetases class I (W and Y) HHJ61_08530 PF02222 ATP-grasp domain HHJ61_08530 PF01370 NAD dependent epimerase/dehydratase family HHJ61_08535 PF17364 Family of unknown function (DUF5389) HHJ61_08540 PF01694 Rhomboid family HHJ61_08545 PF08220 DeoR-like helix-turn-helix domain HHJ61_08545 PF00455 DeoR C terminal sensor domain HHJ61_08550 PF02754 Cysteine-rich domain HHJ61_08550 PF13183 4Fe-4S dicluster domain HHJ61_08555 PF00890 FAD binding domain HHJ61_08560 PF04324 BFD-like [2Fe-2S] binding domain HHJ61_08560 PF01266 FAD dependent oxidoreductase HHJ61_08565 PF07690 Major Facilitator Superfamily HHJ61_08570 PF03009 Glycerophosphoryl diester phosphodiesterase family HHJ61_08575 PF00448 SRP54-type protein, GTPase domain HHJ61_08575 PF02881 SRP54-type protein, helical bundle domain HHJ61_08585 PF17782 DprA winged helix domain HHJ61_08585 PF02481 DNA recombination-mediator protein A HHJ61_08595 PF04055 Radical SAM superfamily HHJ61_08600 PF01594 AI-2E family transporter HHJ61_08605 PF00543 Nitrogen regulatory protein P-II HHJ61_08610 PF00994 Probable molybdopterin binding domain HHJ61_08625 PF01066 CDP-alcohol phosphatidyltransferase HHJ61_08630 PF02080 TrkA-C domain HHJ61_08630 PF03600 Citrate transporter HHJ61_08635 PF13464 Domain of unknown function (DUF4115) HHJ61_08640 PF04551 GcpE protein HHJ61_08645 PF03129 Anticodon binding domain HHJ61_08645 PF13393 Histidyl-tRNA synthetase HHJ61_08650 PF09976 Tetratricopeptide repeat-like domain HHJ61_08655 PF04932 O-Antigen ligase HHJ61_08670 PF01370 NAD dependent epimerase/dehydratase family HHJ61_08675 PF16363 GDP-mannose 4,6 dehydratase HHJ61_08680 PF01050 Mannose-6-phosphate isomerase HHJ61_08680 PF00483 Nucleotidyl transferase HHJ61_08685 PF04751 Protein of unknown function (DUF615) HHJ61_08690 PF01523 Putative modulator of DNA gyrase HHJ61_08695 PF00156 Phosphoribosyl transferase domain HHJ61_08700 PF17274 Family of unknown function (DUF5339) HHJ61_08705 PF01654 Cytochrome bd terminal oxidase subunit I HHJ61_08710 PF02322 Cytochrome bd terminal oxidase subunit II HHJ61_08720 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HHJ61_08730 PF03061 Thioesterase superfamily HHJ61_08735 PF01618 MotA/TolQ/ExbB proton channel family HHJ61_08740 PF02472 Biopolymer transport protein ExbD/TolR HHJ61_08745 PF06519 TolA C-terminal HHJ61_08750 PF07676 WD40-like Beta Propeller Repeat HHJ61_08750 PF04052 TolB amino-terminal domain HHJ61_08755 PF00691 OmpA family HHJ61_08765 PF07963 Prokaryotic N-terminal methylation motif HHJ61_08785 PF17946 RecC C-terminal domain HHJ61_08795 PF00596 Class II Aldolase and Adducin N-terminal domain HHJ61_08800 PF01261 Xylose isomerase-like TIM barrel HHJ61_08805 PF08220 DeoR-like helix-turn-helix domain HHJ61_08805 PF00455 DeoR C terminal sensor domain HHJ61_08815 PF03611 PTS system sugar-specific permease component HHJ61_08820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HHJ61_08825 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HHJ61_08830 PF03480 Bacterial extracellular solute-binding protein, family 7 HHJ61_08835 PF01344 Kelch motif HHJ61_08840 PF04977 Septum formation initiator HHJ61_08845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HHJ61_08900 PF09383 NIL domain HHJ61_08900 PF00005 ABC transporter HHJ61_08905 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_08910 PF03180 NLPA lipoprotein HHJ61_08915 PF01914 MarC family integral membrane protein HHJ61_08920 PF00588 SpoU rRNA Methylase family HHJ61_08925 PF05525 Branched-chain amino acid transport protein HHJ61_08930 PF00483 Nucleotidyl transferase HHJ61_08935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HHJ61_08935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HHJ61_08935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HHJ61_08935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HHJ61_08940 PF02599 Global regulator protein family HHJ61_08945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HHJ61_08945 PF02272 DHHA1 domain HHJ61_08945 PF01411 tRNA synthetases class II (A) HHJ61_08950 PF00582 Universal stress protein family HHJ61_08955 PF03819 MazG nucleotide pyrophosphohydrolase domain HHJ61_08960 PF00892 EamA-like transporter family HHJ61_08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ61_08965 PF03466 LysR substrate binding domain HHJ61_08970 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HHJ61_08970 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HHJ61_08975 PF16347 Domain of unknown function (DUF4976) HHJ61_08975 PF00884 Sulfatase HHJ61_08985 PF00474 Sodium:solute symporter family HHJ61_08995 PF04277 Oxaloacetate decarboxylase, gamma chain HHJ61_09000 PF00364 Biotin-requiring enzyme HHJ61_09000 PF00682 HMGL-like HHJ61_09000 PF02436 Conserved carboxylase domain HHJ61_09005 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HHJ61_09020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HHJ61_09020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HHJ61_09025 PF01491 Frataxin-like domain HHJ61_09030 PF09382 RQC domain HHJ61_09030 PF00570 HRDC domain HHJ61_09030 PF00271 Helicase conserved C-terminal domain HHJ61_09030 PF16124 RecQ zinc-binding HHJ61_09030 PF00270 DEAD/DEAH box helicase HHJ61_09035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HHJ61_09035 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HHJ61_09035 PF02142 MGS-like domain HHJ61_09050 PF00156 Phosphoribosyl transferase domain HHJ61_09055 PF01546 Peptidase family M20/M25/M40 HHJ61_09055 PF07687 Peptidase dimerisation domain HHJ61_09060 PF04851 Type III restriction enzyme, res subunit HHJ61_09060 PF08774 VRR-NUC domain HHJ61_09065 PF18273 Type III R-M EcoP15I C-terminal domain HHJ61_09065 PF01555 DNA methylase HHJ61_09075 PF13508 Acetyltransferase (GNAT) domain HHJ61_09090 PF01545 Cation efflux family HHJ61_09090 PF16916 Dimerisation domain of Zinc Transporter HHJ61_09095 PF00376 MerR family regulatory protein HHJ61_09095 PF09278 MerR, DNA binding HHJ61_09110 PF02384 N-6 DNA Methylase HHJ61_09110 PF12161 HsdM N-terminal domain HHJ61_09125 PF07690 Major Facilitator Superfamily HHJ61_09130 PF00459 Inositol monophosphatase family HHJ61_09135 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HHJ61_09140 PF02874 ATP synthase alpha/beta family, beta-barrel domain HHJ61_09140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HHJ61_09145 PF00231 ATP synthase HHJ61_09150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HHJ61_09150 PF00306 ATP synthase alpha/beta chain, C terminal domain HHJ61_09150 PF02874 ATP synthase alpha/beta family, beta-barrel domain HHJ61_09155 PF00213 ATP synthase delta (OSCP) subunit HHJ61_09160 PF00430 ATP synthase B/B' CF(0) HHJ61_09165 PF00137 ATP synthase subunit C HHJ61_09170 PF00119 ATP synthase A chain HHJ61_09180 PF02527 rRNA small subunit methyltransferase G HHJ61_09185 PF13932 GidA associated domain HHJ61_09185 PF01134 Glucose inhibited division protein A HHJ61_09190 PF00258 Flavodoxin HHJ61_09195 PF06005 Cell division protein ZapB HHJ61_09200 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HHJ61_09205 PF00986 DNA gyrase B subunit, carboxyl terminus HHJ61_09205 PF00204 DNA gyrase B HHJ61_09205 PF01751 Toprim domain HHJ61_09205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ61_09205 PF18053 DNA gyrase B subunit insert domain HHJ61_09210 PF07715 TonB-dependent Receptor Plug Domain HHJ61_09210 PF00593 TonB dependent receptor HHJ61_09215 PF00005 ABC transporter HHJ61_09215 PF00664 ABC transporter transmembrane region HHJ61_09220 PF00664 ABC transporter transmembrane region HHJ61_09220 PF00005 ABC transporter HHJ61_09225 PF00034 Cytochrome c HHJ61_09225 PF03150 Di-haem cytochrome c peroxidase HHJ61_09225 PF14376 Haem-binding domain HHJ61_09235 PF00209 Sodium:neurotransmitter symporter family HHJ61_09240 PF01488 Shikimate / quinate 5-dehydrogenase HHJ61_09240 PF08501 Shikimate dehydrogenase substrate binding domain HHJ61_09240 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HHJ61_09245 PF01300 Telomere recombination HHJ61_09250 PF01396 Topoisomerase DNA binding C4 zinc finger HHJ61_09255 PF02545 Maf-like protein HHJ61_09260 PF02646 RmuC family HHJ61_09265 PF03350 Uncharacterized protein family, UPF0114 HHJ61_09270 PF04994 TfoX C-terminal domain HHJ61_09270 PF04993 TfoX N-terminal domain HHJ61_09300 PF06418 CTP synthase N-terminus HHJ61_09300 PF00117 Glutamine amidotransferase class-I HHJ61_09305 PF01926 50S ribosome-binding GTPase HHJ61_09310 PF12833 Helix-turn-helix domain HHJ61_09315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HHJ61_09315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HHJ61_09325 PF00155 Aminotransferase class I and II HHJ61_09330 PF03553 Na+/H+ antiporter family HHJ61_09335 PF00206 Lyase HHJ61_09335 PF08328 Adenylosuccinate lyase C-terminal HHJ61_09340 PF04356 Protein of unknown function (DUF489) HHJ61_09350 PF00455 DeoR C terminal sensor domain HHJ61_09350 PF08220 DeoR-like helix-turn-helix domain HHJ61_09355 PF06923 Glucitol operon activator protein (GutM) HHJ61_09360 PF00106 short chain dehydrogenase HHJ61_09365 PF03829 PTS system glucitol/sorbitol-specific IIA component HHJ61_09370 PF03612 Sorbitol phosphotransferase enzyme II N-terminus HHJ61_09370 PF07663 Sorbitol phosphotransferase enzyme II C-terminus HHJ61_09375 PF03608 PTS system enzyme II sorbitol-specific factor HHJ61_09380 PF02254 TrkA-N domain HHJ61_09380 PF00999 Sodium/hydrogen exchanger family HHJ61_09385 PF04452 RNA methyltransferase HHJ61_09390 PF02622 Uncharacterized ACR, COG1678 HHJ61_09395 PF03652 Holliday junction resolvase HHJ61_09400 PF02653 Branched-chain amino acid transport system / permease component HHJ61_09405 PF00005 ABC transporter HHJ61_09410 PF13407 Periplasmic binding protein domain HHJ61_09415 PF14815 NUDIX domain HHJ61_09415 PF00730 HhH-GPD superfamily base excision DNA repair protein HHJ61_09420 PF04362 Bacterial Fe(2+) trafficking HHJ61_09425 PF01464 Transglycosylase SLT domain HHJ61_09425 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HHJ61_09440 PF01544 CorA-like Mg2+ transporter protein HHJ61_09445 PF02325 YGGT family HHJ61_09450 PF02594 Uncharacterised ACR, YggU family COG1872 HHJ61_09455 PF18075 FtsX extracellular domain HHJ61_09460 PF00005 ABC transporter HHJ61_09465 PF00456 Transketolase, thiamine diphosphate binding domain HHJ61_09465 PF02780 Transketolase, C-terminal domain HHJ61_09465 PF02779 Transketolase, pyrimidine binding domain HHJ61_09470 PF00596 Class II Aldolase and Adducin N-terminal domain HHJ61_09475 PF01261 Xylose isomerase-like TIM barrel HHJ61_09480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HHJ61_09480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HHJ61_09485 PF03480 Bacterial extracellular solute-binding protein, family 7 HHJ61_09490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HHJ61_09495 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HHJ61_09500 PF04074 YhcH/YjgK/YiaL HHJ61_09505 PF02615 Malate/L-lactate dehydrogenase HHJ61_09510 PF01614 Bacterial transcriptional regulator HHJ61_09510 PF09339 IclR helix-turn-helix domain HHJ61_09515 PF02810 SEC-C motif HHJ61_09520 PF03631 Virulence factor BrkB HHJ61_09525 PF02580 D-Tyr-tRNA(Tyr) deacylase HHJ61_09530 PF00196 Bacterial regulatory proteins, luxR family HHJ61_09530 PF00072 Response regulator receiver domain HHJ61_09535 PF01295 Adenylate cyclase, class-I HHJ61_09535 PF12633 Adenylate cyclase NT domain HHJ61_09540 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HHJ61_09540 PF03900 Porphobilinogen deaminase, C-terminal domain HHJ61_09545 PF02602 Uroporphyrinogen-III synthase HemD HHJ61_09550 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HHJ61_09555 PF07219 HemY protein N-terminus HHJ61_09565 PF00202 Aminotransferase class-III HHJ61_09570 PF00282 Pyridoxal-dependent decarboxylase conserved domain HHJ61_09575 PF13335 Magnesium chelatase, subunit ChlI C-terminal HHJ61_09575 PF01078 Magnesium chelatase, subunit ChlI HHJ61_09580 PF02390 Putative methyltransferase HHJ61_09585 PF04320 Protein with unknown function (DUF469) HHJ61_09590 PF03841 L-seryl-tRNA selenium transferase HHJ61_09590 PF12390 Selenocysteine synthase N terminal HHJ61_09595 PF03144 Elongation factor Tu domain 2 HHJ61_09595 PF09106 Elongation factor SelB, winged helix HHJ61_09595 PF00009 Elongation factor Tu GTP binding domain HHJ61_09595 PF09107 Elongation factor SelB, winged helix HHJ61_09600 PF00849 RNA pseudouridylate synthase HHJ61_09600 PF01479 S4 domain HHJ61_09605 PF10150 Ribonuclease E/G family HHJ61_09605 PF12111 Polyribonucleotide phosphorylase C terminal HHJ61_09605 PF00575 S1 RNA binding domain HHJ61_09615 PF01678 Diaminopimelate epimerase HHJ61_09620 PF07724 AAA domain (Cdc48 subfamily) HHJ61_09620 PF00004 ATPase family associated with various cellular activities (AAA) HHJ61_09620 PF10431 C-terminal, D2-small domain, of ClpB protein HHJ61_09620 PF17871 AAA lid domain HHJ61_09620 PF02861 Clp amino terminal domain, pathogenicity island component HHJ61_09625 PF00378 Enoyl-CoA hydratase/isomerase HHJ61_09635 PF13378 Enolase C-terminal domain-like HHJ61_09640 PF01220 Dehydroquinase class II HHJ61_09645 PF00364 Biotin-requiring enzyme HHJ61_09650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HHJ61_09650 PF00289 Biotin carboxylase, N-terminal domain HHJ61_09650 PF02785 Biotin carboxylase C-terminal domain HHJ61_09655 PF06196 Protein of unknown function (DUF997) HHJ61_09660 PF00474 Sodium:solute symporter family HHJ61_09670 PF01207 Dihydrouridine synthase (Dus) HHJ61_09675 PF02954 Bacterial regulatory protein, Fis family HHJ61_09680 PF00180 Isocitrate/isopropylmalate dehydrogenase HHJ61_09685 PF00849 RNA pseudouridylate synthase HHJ61_09690 PF00293 NUDIX domain HHJ61_09695 PF07274 Protein of unknown function (DUF1440) HHJ61_09700 PF00923 Transaldolase/Fructose-6-phosphate aldolase HHJ61_09705 PF03352 Methyladenine glycosylase HHJ61_09710 PF03968 OstA-like protein HHJ61_09710 PF04453 LPS transport system D HHJ61_09715 PF03498 Cytolethal distending toxin A/C domain HHJ61_09720 PF03372 Endonuclease/Exonuclease/phosphatase family HHJ61_09725 PF03498 Cytolethal distending toxin A/C domain HHJ61_09730 PF01037 Lrp/AsnC ligand binding domain HHJ61_09730 PF13404 AsnC-type helix-turn-helix domain HHJ61_09735 PF03590 Aspartate-ammonia ligase HHJ61_09755 PF00291 Pyridoxal-phosphate dependent enzyme HHJ61_09755 PF00585 C-terminal regulatory domain of Threonine dehydratase HHJ61_09765 PF00920 Dehydratase family HHJ61_09775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HHJ61_09775 PF00205 Thiamine pyrophosphate enzyme, central domain HHJ61_09775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HHJ61_09785 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HHJ61_09790 PF12146 Serine aminopeptidase, S33 HHJ61_09795 PF00440 Bacterial regulatory proteins, tetR family HHJ61_09800 PF03466 LysR substrate binding domain HHJ61_09800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ61_09805 PF00462 Glutaredoxin HHJ61_09805 PF08534 Redoxin HHJ61_09810 PF04102 SlyX HHJ61_09815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HHJ61_09815 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HHJ61_09820 PF13309 HTH domain HHJ61_09820 PF08348 YheO-like PAS domain HHJ61_09825 PF02635 DsrE/DsrF-like family HHJ61_09830 PF02635 DsrE/DsrF-like family HHJ61_09845 PF00164 Ribosomal protein S12/S23 HHJ61_09850 PF00177 Ribosomal protein S7p/S5e HHJ61_09855 PF03764 Elongation factor G, domain IV HHJ61_09855 PF00009 Elongation factor Tu GTP binding domain HHJ61_09855 PF03144 Elongation factor Tu domain 2 HHJ61_09855 PF00679 Elongation factor G C-terminus HHJ61_09855 PF14492 Elongation Factor G, domain II HHJ61_09860 PF00009 Elongation factor Tu GTP binding domain HHJ61_09860 PF03144 Elongation factor Tu domain 2 HHJ61_09860 PF03143 Elongation factor Tu C-terminal domain HHJ61_09865 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HHJ61_09870 PF00467 KOW motif HHJ61_09870 PF02357 Transcription termination factor nusG HHJ61_09890 PF03946 Ribosomal protein L11, N-terminal domain HHJ61_09890 PF00298 Ribosomal protein L11, RNA binding domain HHJ61_09895 PF00687 Ribosomal protein L1p/L10e family HHJ61_09900 PF00466 Ribosomal protein L10 HHJ61_09905 PF00542 Ribosomal protein L7/L12 C-terminal domain HHJ61_09905 PF16320 Ribosomal protein L7/L12 dimerisation domain HHJ61_09910 PF10385 RNA polymerase beta subunit external 1 domain HHJ61_09910 PF04565 RNA polymerase Rpb2, domain 3 HHJ61_09910 PF04561 RNA polymerase Rpb2, domain 2 HHJ61_09910 PF04560 RNA polymerase Rpb2, domain 7 HHJ61_09910 PF04563 RNA polymerase beta subunit HHJ61_09910 PF00562 RNA polymerase Rpb2, domain 6 HHJ61_09915 PF04998 RNA polymerase Rpb1, domain 5 HHJ61_09915 PF04997 RNA polymerase Rpb1, domain 1 HHJ61_09915 PF05000 RNA polymerase Rpb1, domain 4 HHJ61_09915 PF04983 RNA polymerase Rpb1, domain 3 HHJ61_09915 PF00623 RNA polymerase Rpb1, domain 2 HHJ61_09920 PF01184 GPR1/FUN34/yaaH family HHJ61_09925 PF00072 Response regulator receiver domain HHJ61_09925 PF00486 Transcriptional regulatory protein, C terminal HHJ61_09930 PF04355 SmpA / OmlA family HHJ61_09935 PF04245 37-kD nucleoid-associated bacterial protein HHJ61_09940 PF07208 Protein of unknown function (DUF1414) HHJ61_09945 PF11893 Domain of unknown function (DUF3413) HHJ61_09945 PF00884 Sulfatase HHJ61_09955 PF01207 Dihydrouridine synthase (Dus) HHJ61_09960 PF05099 Tellurite resistance protein TerB HHJ61_09960 PF00226 DnaJ domain HHJ61_09965 PF00156 Phosphoribosyl transferase domain HHJ61_09970 PF03725 3' exoribonuclease family, domain 2 HHJ61_09970 PF01138 3' exoribonuclease family, domain 1 HHJ61_09975 PF08340 Domain of unknown function (DUF1732) HHJ61_09975 PF03755 YicC-like family, N-terminal region HHJ61_09980 PF01571 Aminomethyltransferase folate-binding domain HHJ61_09985 PF12804 MobA-like NTP transferase domain HHJ61_09990 PF06288 Protein of unknown function (DUF1040) HHJ61_09995 PF01323 DSBA-like thioredoxin domain HHJ61_10000 PF04219 Protein of unknown function, DUF HHJ61_10005 PF05958 tRNA (Uracil-5-)-methyltransferase HHJ61_10010 PF04445 Putative SAM-dependent methyltransferase HHJ61_10015 PF04461 Protein of unknown function (DUF520) HHJ61_10020 PF18429 Domain of unknown function (DUF5609) HHJ61_10025 PF10144 Bacterial virulence factor haemolysin HHJ61_10030 PF01649 Ribosomal protein S20 HHJ61_10035 PF03023 Lipid II flippase MurJ HHJ61_10040 PF17243 POTRA domain TamA domain 1 HHJ61_10040 PF01103 Surface antigen HHJ61_10045 PF04357 TamB, inner membrane protein subunit of TAM complex HHJ61_10050 PF02541 Ppx/GppA phosphatase family HHJ61_10055 PF00924 Mechanosensitive ion channel HHJ61_10055 PF05552 Conserved TM helix HHJ61_10060 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ61_10060 PF12804 MobA-like NTP transferase domain HHJ61_10070 PF01925 Sulfite exporter TauE/SafE HHJ61_10075 PF03702 Anhydro-N-acetylmuramic acid kinase HHJ61_10085 PF01479 S4 domain HHJ61_10085 PF00849 RNA pseudouridylate synthase HHJ61_10090 PF13525 Outer membrane lipoprotein HHJ61_10095 PF05872 Bacterial protein of unknown function (DUF853) HHJ61_10100 PF04393 Protein of unknown function (DUF535) HHJ61_10105 PF12762 ISXO2-like transposase domain HHJ61_10110 PF00909 Ammonium Transporter Family HHJ61_10110 PF00909 Ammonium Transporter Family HHJ61_10115 PF00543 Nitrogen regulatory protein P-II HHJ61_10120 PF02142 MGS-like domain HHJ61_10120 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HHJ61_10120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HHJ61_10125 PF02567 Phenazine biosynthesis-like protein HHJ61_10130 PF00117 Glutamine amidotransferase class-I HHJ61_10130 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HHJ61_10135 PF04333 MlaA lipoprotein HHJ61_10140 PF03887 YfbU domain HHJ61_10145 PF01118 Semialdehyde dehydrogenase, NAD binding domain HHJ61_10145 PF02774 Semialdehyde dehydrogenase, dimerisation domain HHJ61_10150 PF00271 Helicase conserved C-terminal domain HHJ61_10150 PF00270 DEAD/DEAH box helicase HHJ61_10155 PF05175 Methyltransferase small domain HHJ61_10160 PF04261 Dyp-type peroxidase family HHJ61_10165 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HHJ61_10170 PF00459 Inositol monophosphatase family HHJ61_10175 PF00588 SpoU rRNA Methylase family HHJ61_10180 PF02082 Transcriptional regulator HHJ61_10185 PF00266 Aminotransferase class-V HHJ61_10190 PF01592 NifU-like N terminal domain HHJ61_10195 PF01521 Iron-sulphur cluster biosynthesis HHJ61_10200 PF07743 HSCB C-terminal oligomerisation domain HHJ61_10205 PF07743 HSCB C-terminal oligomerisation domain HHJ61_10210 PF00012 Hsp70 protein HHJ61_10215 PF00111 2Fe-2S iron-sulfur cluster binding domain HHJ61_10220 PF04262 Glutamate-cysteine ligase HHJ61_10220 PF18419 ATP-grasp-like domain HHJ61_10220 PF02655 ATP-grasp domain HHJ61_10230 PF03613 PTS system mannose/fructose/sorbose family IID component HHJ61_10235 PF03609 PTS system sorbose-specific iic component HHJ61_10240 PF03830 PTS system sorbose subfamily IIB component HHJ61_10240 PF03610 PTS system fructose IIA component HHJ61_10250 PF00535 Glycosyl transferase family 2 HHJ61_10255 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HHJ61_10260 PF00886 Ribosomal protein S16 HHJ61_10265 PF01782 RimM N-terminal domain HHJ61_10265 PF05239 PRC-barrel domain HHJ61_10270 PF01746 tRNA (Guanine-1)-methyltransferase HHJ61_10275 PF01245 Ribosomal protein L19 HHJ61_10280 PF00884 Sulfatase HHJ61_10285 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HHJ61_10285 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HHJ61_10290 PF00390 Malic enzyme, N-terminal domain HHJ61_10290 PF03949 Malic enzyme, NAD binding domain HHJ61_10290 PF01515 Phosphate acetyl/butaryl transferase HHJ61_10295 PF00849 RNA pseudouridylate synthase HHJ61_10295 PF01479 S4 domain HHJ61_10300 PF07690 Major Facilitator Superfamily HHJ61_10305 PF00376 MerR family regulatory protein HHJ61_10305 PF09278 MerR, DNA binding HHJ61_10310 PF08019 Phosphoethanolamine transferase EptA/EptB HHJ61_10310 PF00884 Sulfatase HHJ61_10315 PF08501 Shikimate dehydrogenase substrate binding domain HHJ61_10320 PF00132 Bacterial transferase hexapeptide (six repeats) HHJ61_10320 PF06426 Serine acetyltransferase, N-terminal HHJ61_10325 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HHJ61_10325 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HHJ61_10330 PF02556 Preprotein translocase subunit SecB HHJ61_10335 PF00581 Rhodanese-like domain HHJ61_10340 PF03605 Anaerobic c4-dicarboxylate membrane transporter HHJ61_10345 PF00881 Nitroreductase family HHJ61_10355 PF13091 PLD-like domain HHJ61_10360 PF08032 RNA 2'-O ribose methyltransferase substrate binding HHJ61_10360 PF00588 SpoU rRNA Methylase family HHJ61_10365 PF00037 4Fe-4S binding domain HHJ61_10370 PF00445 Ribonuclease T2 family HHJ61_10375 PF00162 Phosphoglycerate kinase HHJ61_10380 PF01116 Fructose-bisphosphate aldolase class-II HHJ61_10390 PF00294 pfkB family carbohydrate kinase HHJ61_10395 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ61_10400 PF13784 Fic/DOC family N-terminal HHJ61_10400 PF02661 Fic/DOC family HHJ61_10405 PF02911 Formyl transferase, C-terminal domain HHJ61_10405 PF00551 Formyl transferase HHJ61_10410 PF01189 16S rRNA methyltransferase RsmB/F HHJ61_10410 PF01029 NusB family HHJ61_10415 PF02080 TrkA-C domain HHJ61_10415 PF02254 TrkA-N domain HHJ61_10420 PF06877 Regulator of ribonuclease activity B HHJ61_10430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HHJ61_10435 PF00271 Helicase conserved C-terminal domain HHJ61_10435 PF00270 DEAD/DEAH box helicase HHJ61_10435 PF03880 DbpA RNA binding domain HHJ61_10445 PF00013 KH domain HHJ61_10445 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HHJ61_10445 PF01138 3' exoribonuclease family, domain 1 HHJ61_10445 PF03725 3' exoribonuclease family, domain 2 HHJ61_10445 PF00575 S1 RNA binding domain HHJ61_10450 PF03264 NapC/NirT cytochrome c family, N-terminal region HHJ61_10455 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HHJ61_10460 PF12801 4Fe-4S binding domain HHJ61_10460 PF12837 4Fe-4S binding domain HHJ61_10465 PF12800 4Fe-4S binding domain HHJ61_10465 PF12838 4Fe-4S dicluster domain HHJ61_10470 PF01568 Molydopterin dinucleotide binding domain HHJ61_10470 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HHJ61_10470 PF10518 TAT (twin-arginine translocation) pathway signal sequence HHJ61_10470 PF00384 Molybdopterin oxidoreductase HHJ61_10475 PF03927 NapD protein HHJ61_10480 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HHJ61_10480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HHJ61_10480 PF07730 Histidine kinase HHJ61_10480 PF00672 HAMP domain HHJ61_10485 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HHJ61_10485 PF01565 FAD binding domain HHJ61_10495 PF04542 Sigma-70 region 2 HHJ61_10495 PF04545 Sigma-70, region 4 HHJ61_10495 PF00140 Sigma-70 factor, region 1.2 HHJ61_10500 PF01106 NifU-like domain HHJ61_10500 PF01521 Iron-sulphur cluster biosynthesis HHJ61_10505 PF00156 Phosphoribosyl transferase domain HHJ61_10510 PF04748 Divergent polysaccharide deacetylase HHJ61_10515 PF01551 Peptidase family M23 HHJ61_10520 PF00300 Histidine phosphatase superfamily (branch 1) HHJ61_10525 PF01206 Sulfurtransferase TusA HHJ61_10530 PF09186 Domain of unknown function (DUF1949) HHJ61_10530 PF01205 Uncharacterized protein family UPF0029 HHJ61_10535 PF02386 Cation transport protein HHJ61_10540 PF12724 Flavodoxin domain HHJ61_10565 PF00238 Ribosomal protein L14p/L23e HHJ61_10570 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HHJ61_10570 PF00467 KOW motif HHJ61_10575 PF00673 ribosomal L5P family C-terminus HHJ61_10575 PF00281 Ribosomal protein L5 HHJ61_10580 PF00253 Ribosomal protein S14p/S29e HHJ61_10585 PF00410 Ribosomal protein S8 HHJ61_10590 PF00347 Ribosomal protein L6 HHJ61_10595 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HHJ61_10600 PF00333 Ribosomal protein S5, N-terminal domain HHJ61_10600 PF03719 Ribosomal protein S5, C-terminal domain HHJ61_10605 PF00327 Ribosomal protein L30p/L7e HHJ61_10610 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HHJ61_10615 PF00344 SecY translocase HHJ61_10620 PF00444 Ribosomal protein L36 HHJ61_10625 PF00416 Ribosomal protein S13/S18 HHJ61_10630 PF00411 Ribosomal protein S11 HHJ61_10635 PF01479 S4 domain HHJ61_10635 PF00163 Ribosomal protein S4/S9 N-terminal domain HHJ61_10640 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HHJ61_10640 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HHJ61_10640 PF01000 RNA polymerase Rpb3/RpoA insert domain HHJ61_10645 PF01196 Ribosomal protein L17 HHJ61_10650 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HHJ61_10655 PF04380 Membrane fusogenic activity HHJ61_10660 PF13521 AAA domain HHJ61_10660 PF01467 Cytidylyltransferase-like HHJ61_10665 PF00149 Calcineurin-like phosphoesterase HHJ61_10675 PF00589 Phage integrase family HHJ61_10675 PF13356 Arm DNA-binding domain HHJ61_10750 PF18766 SWI2/SNF2 ATPase HHJ61_10750 PF11867 Domain of unknown function (DUF3387) HHJ61_10750 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HHJ61_10765 PF01420 Type I restriction modification DNA specificity domain HHJ61_10770 PF02384 N-6 DNA Methylase HHJ61_10780 PF03923 Uncharacterized lipoprotein HHJ61_10785 PF01722 BolA-like protein HHJ61_10790 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HHJ61_10790 PF11973 NQRA C-terminal domain HHJ61_10795 PF03116 NQR2, RnfD, RnfE family HHJ61_10800 PF04205 FMN-binding domain HHJ61_10805 PF02508 Rnf-Nqr subunit, membrane protein HHJ61_10810 PF02508 Rnf-Nqr subunit, membrane protein HHJ61_10815 PF00111 2Fe-2S iron-sulfur cluster binding domain HHJ61_10815 PF00175 Oxidoreductase NAD-binding domain HHJ61_10815 PF00970 Oxidoreductase FAD-binding domain HHJ61_10820 PF02424 ApbE family HHJ61_10825 PF04400 (Na+)-NQR maturation NqrM HHJ61_10835 PF00534 Glycosyl transferases group 1 HHJ61_10835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HHJ61_10840 PF01467 Cytidylyltransferase-like HHJ61_10845 PF03616 Sodium/glutamate symporter HHJ61_10850 PF00485 Phosphoribulokinase / Uridine kinase family HHJ61_10875 PF03143 Elongation factor Tu C-terminal domain HHJ61_10875 PF00009 Elongation factor Tu GTP binding domain HHJ61_10875 PF03144 Elongation factor Tu domain 2 HHJ61_10880 PF09297 NADH pyrophosphatase zinc ribbon domain HHJ61_10880 PF00293 NUDIX domain HHJ61_10885 PF01208 Uroporphyrinogen decarboxylase (URO-D) HHJ61_10890 PF04222 Protein of unknown function (DUF416) HHJ61_10895 PF00216 Bacterial DNA-binding protein HHJ61_10900 PF00455 DeoR C terminal sensor domain HHJ61_10900 PF08220 DeoR-like helix-turn-helix domain HHJ61_10905 PF01380 SIS domain HHJ61_10915 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HHJ61_10915 PF01243 Pyridoxamine 5'-phosphate oxidase HHJ61_10920 PF07690 Major Facilitator Superfamily HHJ61_10925 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HHJ61_10935 PF17188 MucB/RseB C-terminal domain HHJ61_10935 PF03888 MucB/RseB N-terminal domain HHJ61_10940 PF03872 Anti sigma-E protein RseA, N-terminal domain HHJ61_10940 PF03873 Anti sigma-E protein RseA, C-terminal domain HHJ61_10945 PF08281 Sigma-70, region 4 HHJ61_10945 PF04542 Sigma-70 region 2 HHJ61_10950 PF03937 Flavinator of succinate dehydrogenase HHJ61_10960 PF13649 Methyltransferase domain HHJ61_10975 PF07669 Eco57I restriction-modification methylase HHJ61_10980 PF04851 Type III restriction enzyme, res subunit HHJ61_10985 PF04055 Radical SAM superfamily HHJ61_10985 PF00919 Uncharacterized protein family UPF0004 HHJ61_10985 PF18693 TRAM domain HHJ61_10990 PF01451 Low molecular weight phosphotyrosine protein phosphatase HHJ61_10995 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HHJ61_10995 PF07992 Pyridine nucleotide-disulphide oxidoreductase HHJ61_11000 PF00310 Glutamine amidotransferases class-II HHJ61_11000 PF04898 Glutamate synthase central domain HHJ61_11000 PF01645 Conserved region in glutamate synthase HHJ61_11000 PF01493 GXGXG motif HHJ61_11010 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HHJ61_11015 PF00664 ABC transporter transmembrane region HHJ61_11015 PF00005 ABC transporter HHJ61_11020 PF05192 MutS domain III HHJ61_11020 PF05188 MutS domain II HHJ61_11020 PF01624 MutS domain I HHJ61_11020 PF00488 MutS domain V HHJ61_11020 PF05190 MutS family domain IV HHJ61_11025 PF00696 Amino acid kinase family HHJ61_11035 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HHJ61_11045 PF06545 Protein of unknown function (DUF1116) HHJ61_11050 PF00549 CoA-ligase HHJ61_11050 PF02629 CoA binding domain HHJ61_11055 PF00857 Isochorismatase family HHJ61_11060 PF03466 LysR substrate binding domain HHJ61_11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ61_11070 PF06545 Protein of unknown function (DUF1116) HHJ61_11075 PF02629 CoA binding domain HHJ61_11075 PF00549 CoA-ligase HHJ61_11080 PF12796 Ankyrin repeats (3 copies) HHJ61_11085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HHJ61_11085 PF03466 LysR substrate binding domain HHJ61_11090 PF00154 recA bacterial DNA recombination protein HHJ61_11095 PF02631 RecX family HHJ61_11100 PF01797 Transposase IS200 like HHJ61_11105 PF01385 Probable transposase HHJ61_11105 PF12323 Helix-turn-helix domain HHJ61_11105 PF07282 Putative transposase DNA-binding domain HHJ61_11110 PF03129 Anticodon binding domain HHJ61_11110 PF04073 Aminoacyl-tRNA editing domain HHJ61_11110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HHJ61_11115 PF00005 ABC transporter HHJ61_11120 PF00528 Binding-protein-dependent transport system inner membrane component HHJ61_11125 PF00497 Bacterial extracellular solute-binding proteins, family 3 HHJ61_11130 PF06969 HemN C-terminal domain HHJ61_11130 PF04055 Radical SAM superfamily HHJ61_11135 PF10675 Protein of unknown function (DUF2489) HHJ61_11140 PF04220 Der GTPase activator (YihI) HHJ61_11145 PF00849 RNA pseudouridylate synthase HHJ61_11150 PF18337 RapA N-terminal Tudor like domain HHJ61_11150 PF18339 RapA N-terminal Tudor like domain 1 HHJ61_11150 PF00176 SNF2 family N-terminal domain HHJ61_11150 PF00271 Helicase conserved C-terminal domain HHJ61_11150 PF12137 RNA polymerase recycling family C-terminal HHJ61_11155 PF04973 Nicotinamide mononucleotide transporter HHJ61_11160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HHJ61_11160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HHJ61_11165 PF12762 ISXO2-like transposase domain HHJ61_11170 PF00171 Aldehyde dehydrogenase family HHJ61_11175 PF04962 KduI/IolB family HHJ61_11180 PF01047 MarR family HHJ61_11180 PF00480 ROK family HHJ61_11185 PF00121 Triosephosphate isomerase HHJ61_11205 PF02278 Polysaccharide lyase family 8, super-sandwich domain HHJ61_11205 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain HHJ61_11205 PF09093 Lyase, catalytic HHJ61_11205 PF09092 Lyase, N terminal HHJ61_11220 PF07690 Major Facilitator Superfamily HHJ61_11225 PF00596 Class II Aldolase and Adducin N-terminal domain HHJ61_11230 PF05025 RbsD / FucU transport protein family HHJ61_11235 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HHJ61_11235 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HHJ61_11240 PF07882 L-fucose isomerase, second N-terminal domain HHJ61_11240 PF07881 L-fucose isomerase, first N-terminal domain HHJ61_11240 PF02952 L-fucose isomerase, C-terminal domain HHJ61_11245 PF08220 DeoR-like helix-turn-helix domain HHJ61_11245 PF00455 DeoR C terminal sensor domain HHJ61_11250 PF01791 DeoC/LacD family aldolase HHJ61_11255 PF01370 NAD dependent epimerase/dehydratase family HHJ61_11270 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HHJ61_11275 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HHJ61_11280 PF13580 SIS domain HHJ61_11285 PF00265 Thymidine kinase HHJ61_11295 PF00814 Glycoprotease family HHJ61_11300 PF01165 Ribosomal protein S21 HHJ61_11305 PF01807 CHC2 zinc finger HHJ61_11305 PF08278 DNA primase DnaG DnaB-binding HHJ61_11305 PF08275 DNA primase catalytic core, N-terminal domain HHJ61_11305 PF10410 DnaB-helicase binding domain of primase HHJ61_11310 PF03979 Sigma-70 factor, region 1.1 HHJ61_11310 PF04542 Sigma-70 region 2 HHJ61_11310 PF04539 Sigma-70 region 3 HHJ61_11310 PF04545 Sigma-70, region 4 HHJ61_11310 PF00140 Sigma-70 factor, region 1.2 HHJ61_11310 PF04546 Sigma-70, non-essential region HHJ61_11325 PF04175 Protein of unknown function (DUF406) HHJ61_11330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HHJ61_11330 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HHJ61_11335 PF01909 Nucleotidyltransferase domain HHJ61_11340 PF08780 Nucleotidyltransferase substrate binding protein like HHJ61_11345 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HHJ61_11350 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HHJ61_11350 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HHJ61_11355 PF00459 Inositol monophosphatase family HHJ61_11360 PF03169 OPT oligopeptide transporter protein HHJ61_11365 PF01479 S4 domain HHJ61_11370 PF01430 Hsp33 protein HHJ61_11375 PF00356 Bacterial regulatory proteins, lacI family HHJ61_11385 PF08240 Alcohol dehydrogenase GroES-like domain HHJ61_11385 PF00107 Zinc-binding dehydrogenase HHJ61_11390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HHJ61_11390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HHJ61_11395 PF00005 ABC transporter HHJ61_11400 PF02653 Branched-chain amino acid transport system / permease component HHJ61_11405 PF13407 Periplasmic binding protein domain HHJ61_11410 PF01293 Phosphoenolpyruvate carboxykinase HHJ61_11415 PF01340 Met Apo-repressor, MetJ HHJ61_11420 PF00338 Ribosomal protein S10p/S20e HHJ61_11425 PF00297 Ribosomal protein L3 HHJ61_11430 PF00573 Ribosomal protein L4/L1 family HHJ61_11435 PF00276 Ribosomal protein L23 HHJ61_11440 PF00181 Ribosomal Proteins L2, RNA binding domain HHJ61_11440 PF03947 Ribosomal Proteins L2, C-terminal domain HHJ61_11445 PF00203 Ribosomal protein S19 HHJ61_11450 PF00237 Ribosomal protein L22p/L17e HHJ61_11455 PF07650 KH domain HHJ61_11455 PF00189 Ribosomal protein S3, C-terminal domain HHJ61_11460 PF00252 Ribosomal protein L16p/L10e HHJ61_11465 PF00831 Ribosomal L29 protein HHJ61_11470 PF00366 Ribosomal protein S17 HHJ61_11480 PF13356 Arm DNA-binding domain HHJ61_11480 PF14659 Phage integrase, N-terminal SAM-like domain HHJ61_11480 PF00589 Phage integrase family HHJ61_11570 PF03592 Terminase small subunit HHJ61_11640 PF02096 60Kd inner membrane protein HHJ61_11640 PF14849 YidC periplasmic domain HHJ61_11645 PF01809 Putative membrane protein insertion efficiency factor HHJ61_11650 PF00825 Ribonuclease P HHJ61_11655 PF00468 Ribosomal protein L34