locus-tag class description N8E86_00005 PF00308 Bacterial dnaA protein N8E86_00005 PF08299 Bacterial dnaA protein helix-turn-helix N8E86_00005 PF11638 DnaA N-terminal domain N8E86_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain N8E86_00010 PF02767 DNA polymerase III beta subunit, central domain N8E86_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain N8E86_00015 PF02463 RecF/RecN/SMC N terminal domain N8E86_00020 PF02592 Putative vitamin uptake transporter N8E86_00025 PF02565 Recombination protein O C terminal N8E86_00025 PF11967 Recombination protein O N terminal N8E86_00030 PF01938 TRAM domain N8E86_00030 PF05958 tRNA (Uracil-5-)-methyltransferase N8E86_00035 PF02824 TGS domain N8E86_00035 PF13291 ACT domain N8E86_00035 PF04607 Region found in RelA / SpoT proteins N8E86_00040 PF01219 Prokaryotic diacylglycerol kinase N8E86_00045 PF00710 Asparaginase, N-terminal N8E86_00045 PF17763 Glutaminase/Asparaginase C-terminal domain N8E86_00055 PF02152 Dihydroneopterin aldolase N8E86_00060 PF02660 Glycerol-3-phosphate acyltransferase N8E86_00065 PF01327 Polypeptide deformylase N8E86_00070 PF17358 Family of unknown function (DUF5384) N8E86_00075 PF05433 Glycine zipper 2TM domain N8E86_00080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N8E86_00080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N8E86_00080 PF00205 Thiamine pyrophosphate enzyme, central domain N8E86_00085 PF01261 Xylose isomerase-like TIM barrel N8E86_00090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N8E86_00090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N8E86_00095 PF02678 Pirin N8E86_00095 PF05726 Pirin C-terminal cupin domain N8E86_00100 PF03358 NADPH-dependent FMN reductase N8E86_00105 PF02769 AIR synthase related protein, C-terminal domain N8E86_00105 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal N8E86_00105 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain N8E86_00110 PF01472 PUA domain N8E86_00110 PF00696 Amino acid kinase family N8E86_00115 PF00535 Glycosyl transferase family 2 N8E86_00120 PF04932 O-Antigen ligase N8E86_00125 PF09976 Tetratricopeptide repeat-like domain N8E86_00130 PF03129 Anticodon binding domain N8E86_00130 PF13393 Histidyl-tRNA synthetase N8E86_00135 PF04551 GcpE protein N8E86_00140 PF13464 Domain of unknown function (DUF4115) N8E86_00145 PF03600 Citrate transporter N8E86_00145 PF02080 TrkA-C domain N8E86_00150 PF01066 CDP-alcohol phosphatidyltransferase N8E86_00165 PF00994 Probable molybdopterin binding domain N8E86_00170 PF00543 Nitrogen regulatory protein P-II N8E86_00175 PF01594 AI-2E family transporter N8E86_00180 PF04055 Radical SAM superfamily N8E86_00190 PF17782 DprA winged helix domain N8E86_00190 PF02481 DNA recombination-mediator protein A N8E86_00200 PF02881 SRP54-type protein, helical bundle domain N8E86_00200 PF00448 SRP54-type protein, GTPase domain N8E86_00205 PF03009 Glycerophosphoryl diester phosphodiesterase family N8E86_00210 PF07690 Major Facilitator Superfamily N8E86_00215 PF01266 FAD dependent oxidoreductase N8E86_00215 PF04324 BFD-like [2Fe-2S] binding domain N8E86_00220 PF00890 FAD binding domain N8E86_00225 PF02754 Cysteine-rich domain N8E86_00225 PF13183 4Fe-4S dicluster domain N8E86_00230 PF00455 DeoR C terminal sensor domain N8E86_00230 PF08220 DeoR-like helix-turn-helix domain N8E86_00235 PF01694 Rhomboid family N8E86_00240 PF17364 Family of unknown function (DUF5389) N8E86_00245 PF01370 NAD dependent epimerase/dehydratase family N8E86_00245 PF02222 ATP-grasp domain N8E86_00250 PF00579 tRNA synthetases class I (W and Y) N8E86_00255 PF13419 Haloacid dehalogenase-like hydrolase N8E86_00260 PF00834 Ribulose-phosphate 3 epimerase family N8E86_00265 PF01810 LysE type translocator N8E86_00270 PF01042 Endoribonuclease L-PSP N8E86_00290 PF05106 Phage holin family (Lysis protein S) N8E86_00335 PF04233 Phage Mu protein F like protein N8E86_00340 PF13291 ACT domain N8E86_00340 PF04607 Region found in RelA / SpoT proteins N8E86_00340 PF02824 TGS domain N8E86_00415 PF03616 Sodium/glutamate symporter N8E86_00435 PF00440 Bacterial regulatory proteins, tetR family N8E86_00435 PF02909 Tetracyclin repressor-like, C-terminal domain N8E86_00440 PF07690 Major Facilitator Superfamily N8E86_00450 PF12833 Helix-turn-helix domain N8E86_00460 PF01131 DNA topoisomerase N8E86_00460 PF01751 Toprim domain N8E86_00480 PF00436 Single-strand binding protein family N8E86_00515 PF00772 DnaB-like helicase N terminal domain N8E86_00515 PF03796 DnaB-like helicase C terminal domain N8E86_00535 PF01464 Transglycosylase SLT domain N8E86_00535 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain N8E86_00540 PF04362 Bacterial Fe(2+) trafficking N8E86_00545 PF14815 NUDIX domain N8E86_00545 PF00730 HhH-GPD superfamily base excision DNA repair protein N8E86_00550 PF13407 Periplasmic binding protein domain N8E86_00555 PF00005 ABC transporter N8E86_00560 PF02653 Branched-chain amino acid transport system / permease component N8E86_00565 PF03652 Holliday junction resolvase N8E86_00570 PF02622 Uncharacterized ACR, COG1678 N8E86_00575 PF04452 RNA methyltransferase N8E86_00580 PF00999 Sodium/hydrogen exchanger family N8E86_00580 PF02254 TrkA-N domain N8E86_00585 PF03608 PTS system enzyme II sorbitol-specific factor N8E86_00590 PF03612 Sorbitol phosphotransferase enzyme II N-terminus N8E86_00590 PF07663 Sorbitol phosphotransferase enzyme II C-terminus N8E86_00595 PF03829 PTS system glucitol/sorbitol-specific IIA component N8E86_00600 PF00106 short chain dehydrogenase N8E86_00605 PF06923 Glucitol operon activator protein (GutM) N8E86_00610 PF00455 DeoR C terminal sensor domain N8E86_00610 PF08220 DeoR-like helix-turn-helix domain N8E86_00620 PF04356 Protein of unknown function (DUF489) N8E86_00625 PF08328 Adenylosuccinate lyase C-terminal N8E86_00625 PF00206 Lyase N8E86_00635 PF03553 Na+/H+ antiporter family N8E86_00640 PF00155 Aminotransferase class I and II N8E86_00650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N8E86_00650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N8E86_00655 PF12833 Helix-turn-helix domain N8E86_00660 PF01926 50S ribosome-binding GTPase N8E86_00665 PF00117 Glutamine amidotransferase class-I N8E86_00665 PF06418 CTP synthase N-terminus N8E86_00695 PF09383 NIL domain N8E86_00695 PF00005 ABC transporter N8E86_00700 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_00705 PF03180 NLPA lipoprotein N8E86_00710 PF01914 MarC family integral membrane protein N8E86_00715 PF00588 SpoU rRNA Methylase family N8E86_00720 PF05525 Branched-chain amino acid transport protein N8E86_00725 PF00483 Nucleotidyl transferase N8E86_00730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N8E86_00730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N8E86_00730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N8E86_00730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N8E86_00735 PF02599 Global regulator protein family N8E86_00740 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N8E86_00740 PF01411 tRNA synthetases class II (A) N8E86_00740 PF02272 DHHA1 domain N8E86_00745 PF00582 Universal stress protein family N8E86_00750 PF03819 MazG nucleotide pyrophosphohydrolase domain N8E86_00755 PF00892 EamA-like transporter family N8E86_00760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E86_00760 PF03466 LysR substrate binding domain N8E86_00765 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain N8E86_00765 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain N8E86_00770 PF00884 Sulfatase N8E86_00770 PF16347 Domain of unknown function (DUF4976) N8E86_00780 PF00474 Sodium:solute symporter family N8E86_00785 PF12848 ABC transporter N8E86_00785 PF00005 ABC transporter N8E86_00790 PF04277 Oxaloacetate decarboxylase, gamma chain N8E86_00795 PF02436 Conserved carboxylase domain N8E86_00795 PF00682 HMGL-like N8E86_00795 PF00364 Biotin-requiring enzyme N8E86_00800 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit N8E86_00815 PF02540 NAD synthase N8E86_00835 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N8E86_00835 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N8E86_00840 PF13627 Prokaryotic lipoprotein-attachment site N8E86_00845 PF01491 Frataxin-like domain N8E86_00850 PF00271 Helicase conserved C-terminal domain N8E86_00850 PF00570 HRDC domain N8E86_00850 PF16124 RecQ zinc-binding N8E86_00850 PF09382 RQC domain N8E86_00850 PF00270 DEAD/DEAH box helicase N8E86_00855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N8E86_00855 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N8E86_00855 PF02142 MGS-like domain N8E86_00870 PF00156 Phosphoribosyl transferase domain N8E86_00875 PF01546 Peptidase family M20/M25/M40 N8E86_00875 PF07687 Peptidase dimerisation domain N8E86_00880 PF13508 Acetyltransferase (GNAT) domain N8E86_00890 PF01545 Cation efflux family N8E86_00890 PF16916 Dimerisation domain of Zinc Transporter N8E86_00895 PF00376 MerR family regulatory protein N8E86_00895 PF09278 MerR, DNA binding N8E86_00930 PF12008 Type I restriction and modification enzyme - subunit R C terminal N8E86_00930 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N8E86_00930 PF18766 SWI2/SNF2 ATPase N8E86_00940 PF02384 N-6 DNA Methylase N8E86_00940 PF12161 HsdM N-terminal domain N8E86_00955 PF07690 Major Facilitator Superfamily N8E86_00960 PF00459 Inositol monophosphatase family N8E86_00965 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain N8E86_00970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N8E86_00970 PF02874 ATP synthase alpha/beta family, beta-barrel domain N8E86_00975 PF00231 ATP synthase N8E86_00980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N8E86_00980 PF00306 ATP synthase alpha/beta chain, C terminal domain N8E86_00980 PF02874 ATP synthase alpha/beta family, beta-barrel domain N8E86_00985 PF00213 ATP synthase delta (OSCP) subunit N8E86_00990 PF00430 ATP synthase B/B' CF(0) N8E86_00995 PF00137 ATP synthase subunit C N8E86_01000 PF00119 ATP synthase A chain N8E86_01010 PF02527 rRNA small subunit methyltransferase G N8E86_01015 PF01134 Glucose inhibited division protein A N8E86_01015 PF13932 GidA associated domain N8E86_01020 PF00258 Flavodoxin N8E86_01025 PF06005 Cell division protein ZapB N8E86_01030 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded N8E86_01035 PF00986 DNA gyrase B subunit, carboxyl terminus N8E86_01035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E86_01035 PF01751 Toprim domain N8E86_01035 PF18053 DNA gyrase B subunit insert domain N8E86_01035 PF00204 DNA gyrase B N8E86_01045 PF00593 TonB dependent receptor N8E86_01045 PF04886 PT repeat N8E86_01045 PF07715 TonB-dependent Receptor Plug Domain N8E86_01050 PF00664 ABC transporter transmembrane region N8E86_01050 PF00005 ABC transporter N8E86_01055 PF00005 ABC transporter N8E86_01055 PF00664 ABC transporter transmembrane region N8E86_01060 PF03150 Di-haem cytochrome c peroxidase N8E86_01060 PF14376 Haem-binding domain N8E86_01060 PF00034 Cytochrome c N8E86_01070 PF00209 Sodium:neurotransmitter symporter family N8E86_01075 PF18317 Shikimate 5'-dehydrogenase C-terminal domain N8E86_01075 PF08501 Shikimate dehydrogenase substrate binding domain N8E86_01075 PF01488 Shikimate / quinate 5-dehydrogenase N8E86_01080 PF01300 Telomere recombination N8E86_01085 PF01396 Topoisomerase DNA binding C4 zinc finger N8E86_01090 PF02545 Maf-like protein N8E86_01095 PF02646 RmuC family N8E86_01100 PF03350 Uncharacterized protein family, UPF0114 N8E86_01105 PF04993 TfoX N-terminal domain N8E86_01105 PF04994 TfoX C-terminal domain N8E86_01130 PF00238 Ribosomal protein L14p/L23e N8E86_01135 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 N8E86_01135 PF00467 KOW motif N8E86_01140 PF00673 ribosomal L5P family C-terminus N8E86_01140 PF00281 Ribosomal protein L5 N8E86_01145 PF00253 Ribosomal protein S14p/S29e N8E86_01150 PF00410 Ribosomal protein S8 N8E86_01155 PF00347 Ribosomal protein L6 N8E86_01160 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast N8E86_01165 PF03719 Ribosomal protein S5, C-terminal domain N8E86_01165 PF00333 Ribosomal protein S5, N-terminal domain N8E86_01170 PF00327 Ribosomal protein L30p/L7e N8E86_01175 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A N8E86_01180 PF00344 SecY translocase N8E86_01185 PF00444 Ribosomal protein L36 N8E86_01190 PF00416 Ribosomal protein S13/S18 N8E86_01195 PF00411 Ribosomal protein S11 N8E86_01200 PF01479 S4 domain N8E86_01200 PF00163 Ribosomal protein S4/S9 N-terminal domain N8E86_01205 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain N8E86_01205 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain N8E86_01205 PF01000 RNA polymerase Rpb3/RpoA insert domain N8E86_01210 PF01196 Ribosomal protein L17 N8E86_01215 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N8E86_01220 PF04380 Membrane fusogenic activity N8E86_01225 PF01467 Cytidylyltransferase-like N8E86_01225 PF13521 AAA domain N8E86_01230 PF00149 Calcineurin-like phosphoesterase N8E86_01240 PF13356 Arm DNA-binding domain N8E86_01240 PF00589 Phage integrase family N8E86_01310 PF18766 SWI2/SNF2 ATPase N8E86_01310 PF11867 Domain of unknown function (DUF3387) N8E86_01310 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N8E86_01320 PF01420 Type I restriction modification DNA specificity domain N8E86_01335 PF03923 Uncharacterized lipoprotein N8E86_01340 PF01722 BolA-like protein N8E86_01345 PF11973 NQRA C-terminal domain N8E86_01345 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) N8E86_01350 PF03116 NQR2, RnfD, RnfE family N8E86_01355 PF04205 FMN-binding domain N8E86_01360 PF02508 Rnf-Nqr subunit, membrane protein N8E86_01365 PF02508 Rnf-Nqr subunit, membrane protein N8E86_01370 PF00175 Oxidoreductase NAD-binding domain N8E86_01370 PF00970 Oxidoreductase FAD-binding domain N8E86_01370 PF00111 2Fe-2S iron-sulfur cluster binding domain N8E86_01380 PF02424 ApbE family N8E86_01385 PF04400 (Na+)-NQR maturation NqrM N8E86_01395 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) N8E86_01395 PF00534 Glycosyl transferases group 1 N8E86_01400 PF01467 Cytidylyltransferase-like N8E86_01405 PF03616 Sodium/glutamate symporter N8E86_01410 PF00485 Phosphoribulokinase / Uridine kinase family N8E86_01435 PF03143 Elongation factor Tu C-terminal domain N8E86_01435 PF03144 Elongation factor Tu domain 2 N8E86_01435 PF00009 Elongation factor Tu GTP binding domain N8E86_01440 PF09297 NADH pyrophosphatase zinc ribbon domain N8E86_01440 PF00293 NUDIX domain N8E86_01445 PF01208 Uroporphyrinogen decarboxylase (URO-D) N8E86_01450 PF04222 Protein of unknown function (DUF416) N8E86_01455 PF00216 Bacterial DNA-binding protein N8E86_01460 PF00455 DeoR C terminal sensor domain N8E86_01460 PF08220 DeoR-like helix-turn-helix domain N8E86_01465 PF01380 SIS domain N8E86_01475 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region N8E86_01475 PF01243 Pyridoxamine 5'-phosphate oxidase N8E86_01480 PF07690 Major Facilitator Superfamily N8E86_01485 PF03205 Molybdopterin guanine dinucleotide synthesis protein B N8E86_01495 PF17188 MucB/RseB C-terminal domain N8E86_01495 PF03888 MucB/RseB N-terminal domain N8E86_01500 PF03872 Anti sigma-E protein RseA, N-terminal domain N8E86_01500 PF03873 Anti sigma-E protein RseA, C-terminal domain N8E86_01505 PF08281 Sigma-70, region 4 N8E86_01505 PF04542 Sigma-70 region 2 N8E86_01510 PF03937 Flavinator of succinate dehydrogenase N8E86_01520 PF13649 Methyltransferase domain N8E86_01535 PF07669 Eco57I restriction-modification methylase N8E86_01540 PF04851 Type III restriction enzyme, res subunit N8E86_01545 PF04055 Radical SAM superfamily N8E86_01545 PF18693 TRAM domain N8E86_01545 PF00919 Uncharacterized protein family UPF0004 N8E86_01550 PF01451 Low molecular weight phosphotyrosine protein phosphatase N8E86_01555 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N8E86_01555 PF07992 Pyridine nucleotide-disulphide oxidoreductase N8E86_01560 PF01493 GXGXG motif N8E86_01560 PF01645 Conserved region in glutamate synthase N8E86_01560 PF04898 Glutamate synthase central domain N8E86_01560 PF00310 Glutamine amidotransferases class-II N8E86_01570 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N8E86_01575 PF00005 ABC transporter N8E86_01575 PF00664 ABC transporter transmembrane region N8E86_01580 PF05190 MutS family domain IV N8E86_01580 PF05192 MutS domain III N8E86_01580 PF00488 MutS domain V N8E86_01580 PF01624 MutS domain I N8E86_01580 PF05188 MutS domain II N8E86_01585 PF00696 Amino acid kinase family N8E86_01595 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin N8E86_01605 PF06545 Protein of unknown function (DUF1116) N8E86_01610 PF02629 CoA binding domain N8E86_01610 PF00549 CoA-ligase N8E86_01615 PF00857 Isochorismatase family N8E86_01620 PF03466 LysR substrate binding domain N8E86_01620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E86_01630 PF06545 Protein of unknown function (DUF1116) N8E86_01635 PF02629 CoA binding domain N8E86_01635 PF00549 CoA-ligase N8E86_01640 PF12796 Ankyrin repeats (3 copies) N8E86_01645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E86_01645 PF03466 LysR substrate binding domain N8E86_01650 PF00154 recA bacterial DNA recombination protein N8E86_01655 PF02631 RecX family N8E86_01660 PF03129 Anticodon binding domain N8E86_01660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N8E86_01660 PF04073 Aminoacyl-tRNA editing domain N8E86_01670 PF00585 C-terminal regulatory domain of Threonine dehydratase N8E86_01670 PF00291 Pyridoxal-phosphate dependent enzyme N8E86_01680 PF00920 Dehydratase family N8E86_01690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N8E86_01690 PF00205 Thiamine pyrophosphate enzyme, central domain N8E86_01690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N8E86_01700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) N8E86_01705 PF12146 Serine aminopeptidase, S33 N8E86_01710 PF00440 Bacterial regulatory proteins, tetR family N8E86_01715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E86_01715 PF03466 LysR substrate binding domain N8E86_01720 PF08534 Redoxin N8E86_01720 PF00462 Glutaredoxin N8E86_01725 PF04102 SlyX N8E86_01730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N8E86_01730 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N8E86_01735 PF13309 HTH domain N8E86_01735 PF08348 YheO-like PAS domain N8E86_01740 PF02635 DsrE/DsrF-like family N8E86_01745 PF02635 DsrE/DsrF-like family N8E86_01755 PF00164 Ribosomal protein S12/S23 N8E86_01760 PF00177 Ribosomal protein S7p/S5e N8E86_01765 PF00009 Elongation factor Tu GTP binding domain N8E86_01765 PF03144 Elongation factor Tu domain 2 N8E86_01765 PF14492 Elongation Factor G, domain II N8E86_01765 PF00679 Elongation factor G C-terminus N8E86_01765 PF03764 Elongation factor G, domain IV N8E86_01770 PF03144 Elongation factor Tu domain 2 N8E86_01770 PF00009 Elongation factor Tu GTP binding domain N8E86_01770 PF03143 Elongation factor Tu C-terminal domain N8E86_01775 PF00584 SecE/Sec61-gamma subunits of protein translocation complex N8E86_01780 PF02357 Transcription termination factor nusG N8E86_01780 PF00467 KOW motif N8E86_01800 PF03946 Ribosomal protein L11, N-terminal domain N8E86_01800 PF00298 Ribosomal protein L11, RNA binding domain N8E86_01805 PF00687 Ribosomal protein L1p/L10e family N8E86_01810 PF00466 Ribosomal protein L10 N8E86_01815 PF16320 Ribosomal protein L7/L12 dimerisation domain N8E86_01815 PF00542 Ribosomal protein L7/L12 C-terminal domain N8E86_01820 PF00562 RNA polymerase Rpb2, domain 6 N8E86_01820 PF10385 RNA polymerase beta subunit external 1 domain N8E86_01820 PF04565 RNA polymerase Rpb2, domain 3 N8E86_01820 PF04561 RNA polymerase Rpb2, domain 2 N8E86_01820 PF04563 RNA polymerase beta subunit N8E86_01820 PF04560 RNA polymerase Rpb2, domain 7 N8E86_01825 PF04983 RNA polymerase Rpb1, domain 3 N8E86_01825 PF00623 RNA polymerase Rpb1, domain 2 N8E86_01825 PF04998 RNA polymerase Rpb1, domain 5 N8E86_01825 PF04997 RNA polymerase Rpb1, domain 1 N8E86_01825 PF05000 RNA polymerase Rpb1, domain 4 N8E86_01830 PF01184 GPR1/FUN34/yaaH family N8E86_01835 PF00072 Response regulator receiver domain N8E86_01835 PF00486 Transcriptional regulatory protein, C terminal N8E86_01840 PF04355 SmpA / OmlA family N8E86_01845 PF04245 37-kD nucleoid-associated bacterial protein N8E86_01850 PF07208 Protein of unknown function (DUF1414) N8E86_01855 PF00884 Sulfatase N8E86_01855 PF11893 Domain of unknown function (DUF3413) N8E86_01865 PF01207 Dihydrouridine synthase (Dus) N8E86_01870 PF00226 DnaJ domain N8E86_01870 PF05099 Tellurite resistance protein TerB N8E86_01875 PF00156 Phosphoribosyl transferase domain N8E86_01880 PF01138 3' exoribonuclease family, domain 1 N8E86_01880 PF03725 3' exoribonuclease family, domain 2 N8E86_01885 PF08340 Domain of unknown function (DUF1732) N8E86_01885 PF03755 YicC-like family, N-terminal region N8E86_01890 PF01571 Aminomethyltransferase folate-binding domain N8E86_01895 PF12804 MobA-like NTP transferase domain N8E86_01900 PF06288 Protein of unknown function (DUF1040) N8E86_01905 PF01323 DSBA-like thioredoxin domain N8E86_01910 PF04219 Protein of unknown function, DUF N8E86_01915 PF05958 tRNA (Uracil-5-)-methyltransferase N8E86_01920 PF04445 Putative SAM-dependent methyltransferase N8E86_01925 PF04461 Protein of unknown function (DUF520) N8E86_01930 PF18429 Domain of unknown function (DUF5609) N8E86_01935 PF10144 Bacterial virulence factor haemolysin N8E86_01940 PF01649 Ribosomal protein S20 N8E86_01945 PF03023 Lipid II flippase MurJ N8E86_01950 PF01103 Surface antigen N8E86_01950 PF17243 POTRA domain TamA domain 1 N8E86_01955 PF04357 TamB, inner membrane protein subunit of TAM complex N8E86_01960 PF02541 Ppx/GppA phosphatase family N8E86_01965 PF00924 Mechanosensitive ion channel N8E86_01965 PF05552 Conserved TM helix N8E86_01970 PF00132 Bacterial transferase hexapeptide (six repeats) N8E86_01970 PF12804 MobA-like NTP transferase domain N8E86_01975 PF02668 Taurine catabolism dioxygenase TauD, TfdA family N8E86_01980 PF01925 Sulfite exporter TauE/SafE N8E86_01985 PF03702 Anhydro-N-acetylmuramic acid kinase N8E86_01990 PF02578 Multi-copper polyphenol oxidoreductase laccase N8E86_01995 PF00849 RNA pseudouridylate synthase N8E86_01995 PF01479 S4 domain N8E86_02000 PF13525 Outer membrane lipoprotein N8E86_02005 PF05872 Bacterial protein of unknown function (DUF853) N8E86_02010 PF04393 Protein of unknown function (DUF535) N8E86_02015 PF00909 Ammonium Transporter Family N8E86_02020 PF00909 Ammonium Transporter Family N8E86_02025 PF00909 Ammonium Transporter Family N8E86_02030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N8E86_02030 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N8E86_02030 PF02142 MGS-like domain N8E86_02035 PF02567 Phenazine biosynthesis-like protein N8E86_02040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain N8E86_02040 PF00117 Glutamine amidotransferase class-I N8E86_02045 PF04333 MlaA lipoprotein N8E86_02050 PF03887 YfbU domain N8E86_02055 PF01118 Semialdehyde dehydrogenase, NAD binding domain N8E86_02055 PF02774 Semialdehyde dehydrogenase, dimerisation domain N8E86_02060 PF00270 DEAD/DEAH box helicase N8E86_02060 PF00271 Helicase conserved C-terminal domain N8E86_02065 PF05175 Methyltransferase small domain N8E86_02070 PF04261 Dyp-type peroxidase family N8E86_02075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N8E86_02080 PF00459 Inositol monophosphatase family N8E86_02085 PF00588 SpoU rRNA Methylase family N8E86_02090 PF02082 Transcriptional regulator N8E86_02095 PF00266 Aminotransferase class-V N8E86_02100 PF01592 NifU-like N terminal domain N8E86_02105 PF01521 Iron-sulphur cluster biosynthesis N8E86_02110 PF07743 HSCB C-terminal oligomerisation domain N8E86_02115 PF00012 Hsp70 protein N8E86_02120 PF00111 2Fe-2S iron-sulfur cluster binding domain N8E86_02125 PF04262 Glutamate-cysteine ligase N8E86_02125 PF18419 ATP-grasp-like domain N8E86_02125 PF02655 ATP-grasp domain N8E86_02135 PF03613 PTS system mannose/fructose/sorbose family IID component N8E86_02140 PF03609 PTS system sorbose-specific iic component N8E86_02145 PF03830 PTS system sorbose subfamily IIB component N8E86_02145 PF03610 PTS system fructose IIA component N8E86_02155 PF00535 Glycosyl transferase family 2 N8E86_02160 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N8E86_02165 PF00886 Ribosomal protein S16 N8E86_02170 PF01782 RimM N-terminal domain N8E86_02170 PF05239 PRC-barrel domain N8E86_02175 PF01746 tRNA (Guanine-1)-methyltransferase N8E86_02180 PF01245 Ribosomal protein L19 N8E86_02185 PF00884 Sulfatase N8E86_02190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N8E86_02190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N8E86_02195 PF00390 Malic enzyme, N-terminal domain N8E86_02195 PF03949 Malic enzyme, NAD binding domain N8E86_02195 PF01515 Phosphate acetyl/butaryl transferase N8E86_02200 PF00849 RNA pseudouridylate synthase N8E86_02200 PF01479 S4 domain N8E86_02205 PF07690 Major Facilitator Superfamily N8E86_02210 PF09278 MerR, DNA binding N8E86_02210 PF00376 MerR family regulatory protein N8E86_02215 PF08019 Phosphoethanolamine transferase EptA/EptB N8E86_02215 PF00884 Sulfatase N8E86_02225 PF00132 Bacterial transferase hexapeptide (six repeats) N8E86_02225 PF06426 Serine acetyltransferase, N-terminal N8E86_02230 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus N8E86_02230 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus N8E86_02235 PF02556 Preprotein translocase subunit SecB N8E86_02240 PF00581 Rhodanese-like domain N8E86_02245 PF03605 Anaerobic c4-dicarboxylate membrane transporter N8E86_02250 PF00881 Nitroreductase family N8E86_02260 PF13091 PLD-like domain N8E86_02265 PF08032 RNA 2'-O ribose methyltransferase substrate binding N8E86_02265 PF00588 SpoU rRNA Methylase family N8E86_02270 PF00037 4Fe-4S binding domain N8E86_02275 PF00445 Ribonuclease T2 family N8E86_02280 PF00162 Phosphoglycerate kinase N8E86_02285 PF01116 Fructose-bisphosphate aldolase class-II N8E86_02295 PF00294 pfkB family carbohydrate kinase N8E86_02300 PF07992 Pyridine nucleotide-disulphide oxidoreductase N8E86_02305 PF02661 Fic/DOC family N8E86_02305 PF13784 Fic/DOC family N-terminal N8E86_02310 PF02911 Formyl transferase, C-terminal domain N8E86_02310 PF00551 Formyl transferase N8E86_02315 PF01189 16S rRNA methyltransferase RsmB/F N8E86_02315 PF01029 NusB family N8E86_02320 PF02254 TrkA-N domain N8E86_02320 PF02080 TrkA-C domain N8E86_02325 PF06877 Regulator of ribonuclease activity B N8E86_02355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N8E86_02360 PF00271 Helicase conserved C-terminal domain N8E86_02360 PF00270 DEAD/DEAH box helicase N8E86_02360 PF03880 DbpA RNA binding domain N8E86_02370 PF03725 3' exoribonuclease family, domain 2 N8E86_02370 PF01138 3' exoribonuclease family, domain 1 N8E86_02370 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain N8E86_02370 PF00013 KH domain N8E86_02370 PF00575 S1 RNA binding domain N8E86_02375 PF03264 NapC/NirT cytochrome c family, N-terminal region N8E86_02380 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) N8E86_02385 PF12801 4Fe-4S binding domain N8E86_02385 PF12837 4Fe-4S binding domain N8E86_02395 PF00384 Molybdopterin oxidoreductase N8E86_02395 PF01568 Molydopterin dinucleotide binding domain N8E86_02395 PF10518 TAT (twin-arginine translocation) pathway signal sequence N8E86_02395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N8E86_02400 PF03927 NapD protein N8E86_02405 PF00672 HAMP domain N8E86_02405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E86_02405 PF07730 Histidine kinase N8E86_02405 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term N8E86_02410 PF01565 FAD binding domain N8E86_02410 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N8E86_02420 PF04542 Sigma-70 region 2 N8E86_02420 PF04545 Sigma-70, region 4 N8E86_02420 PF00140 Sigma-70 factor, region 1.2 N8E86_02425 PF01521 Iron-sulphur cluster biosynthesis N8E86_02425 PF01106 NifU-like domain N8E86_02430 PF00156 Phosphoribosyl transferase domain N8E86_02435 PF04748 Divergent polysaccharide deacetylase N8E86_02440 PF01551 Peptidase family M23 N8E86_02445 PF00300 Histidine phosphatase superfamily (branch 1) N8E86_02450 PF01206 Sulfurtransferase TusA N8E86_02455 PF09186 Domain of unknown function (DUF1949) N8E86_02455 PF01205 Uncharacterized protein family UPF0029 N8E86_02460 PF02386 Cation transport protein N8E86_02465 PF12724 Flavodoxin domain N8E86_02515 PF08218 Citrate lyase ligase C-terminal domain N8E86_02520 PF06857 Malonate decarboxylase delta subunit (MdcD) N8E86_02525 PF03328 HpcH/HpaI aldolase/citrate lyase family N8E86_02530 PF04223 Citrate lyase, alpha subunit (CitF) N8E86_02535 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase N8E86_02535 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase N8E86_02540 PF00939 Sodium:sulfate symporter transmembrane region N8E86_02545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase N8E86_02550 PF04977 Septum formation initiator N8E86_02555 PF01344 Kelch motif N8E86_02560 PF03480 Bacterial extracellular solute-binding protein, family 7 N8E86_02565 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N8E86_02570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N8E86_02575 PF03611 PTS system sugar-specific permease component N8E86_02585 PF00455 DeoR C terminal sensor domain N8E86_02585 PF08220 DeoR-like helix-turn-helix domain N8E86_02590 PF01261 Xylose isomerase-like TIM barrel N8E86_02595 PF00596 Class II Aldolase and Adducin N-terminal domain N8E86_02605 PF17946 RecC C-terminal domain N8E86_02625 PF07963 Prokaryotic N-terminal methylation motif N8E86_02645 PF00691 OmpA family N8E86_02650 PF07676 WD40-like Beta Propeller Repeat N8E86_02650 PF04052 TolB amino-terminal domain N8E86_02655 PF06519 TolA C-terminal N8E86_02660 PF02472 Biopolymer transport protein ExbD/TolR N8E86_02665 PF01618 MotA/TolQ/ExbB proton channel family N8E86_02670 PF03061 Thioesterase superfamily N8E86_02675 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) N8E86_02685 PF02322 Cytochrome bd terminal oxidase subunit II N8E86_02690 PF01654 Cytochrome bd terminal oxidase subunit I N8E86_02695 PF17274 Family of unknown function (DUF5339) N8E86_02700 PF00156 Phosphoribosyl transferase domain N8E86_02705 PF01523 Putative modulator of DNA gyrase N8E86_02710 PF04751 Protein of unknown function (DUF615) N8E86_02715 PF01050 Mannose-6-phosphate isomerase N8E86_02715 PF00483 Nucleotidyl transferase N8E86_02720 PF16363 GDP-mannose 4,6 dehydratase N8E86_02725 PF01370 NAD dependent epimerase/dehydratase family N8E86_02735 PF00535 Glycosyl transferase family 2 N8E86_02740 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) N8E86_02745 PF00005 ABC transporter N8E86_02750 PF01061 ABC-2 type transporter N8E86_02755 PF00679 Elongation factor G C-terminus N8E86_02755 PF00009 Elongation factor Tu GTP binding domain N8E86_02755 PF03144 Elongation factor Tu domain 2 N8E86_02760 PF00120 Glutamine synthetase, catalytic domain N8E86_02760 PF03951 Glutamine synthetase, beta-Grasp domain N8E86_02770 PF02773 S-adenosylmethionine synthetase, C-terminal domain N8E86_02770 PF02772 S-adenosylmethionine synthetase, central domain N8E86_02770 PF00438 S-adenosylmethionine synthetase, N-terminal domain N8E86_02775 PF00795 Carbon-nitrogen hydrolase N8E86_02780 PF03471 Transporter associated domain N8E86_02780 PF00571 CBS domain N8E86_02785 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_02790 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_02795 PF00497 Bacterial extracellular solute-binding proteins, family 3 N8E86_02800 PF00005 ABC transporter N8E86_02805 PF01594 AI-2E family transporter N8E86_02810 PF03960 ArsC family N8E86_02815 PF03889 Alternative ribosome-rescue factor A N8E86_02820 PF17347 Family of unknown function (DUF5377) N8E86_02825 PF00448 SRP54-type protein, GTPase domain N8E86_02825 PF02881 SRP54-type protein, helical bundle domain N8E86_02825 PF02978 Signal peptide binding domain N8E86_02830 PF01578 Cytochrome C assembly protein N8E86_02835 PF01595 Cyclin M transmembrane N-terminal domain N8E86_02835 PF00571 CBS domain N8E86_02835 PF03471 Transporter associated domain N8E86_02840 PF01618 MotA/TolQ/ExbB proton channel family N8E86_02845 PF02472 Biopolymer transport protein ExbD/TolR N8E86_02850 PF03544 Gram-negative bacterial TonB protein C-terminal N8E86_02855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N8E86_02855 PF02378 Phosphotransferase system, EIIC N8E86_02855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N8E86_02860 PF01232 Mannitol dehydrogenase Rossmann domain N8E86_02860 PF08125 Mannitol dehydrogenase C-terminal domain N8E86_02865 PF05068 Mannitol repressor N8E86_02870 PF04488 Glycosyltransferase sugar-binding region containing DXD motif N8E86_02875 PF00476 DNA polymerase family A N8E86_02875 PF01612 3'-5' exonuclease N8E86_02875 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N8E86_02875 PF01367 5'-3' exonuclease, C-terminal SAM fold N8E86_02885 PF02028 BCCT, betaine/carnitine/choline family transporter N8E86_02905 PF05697 Bacterial trigger factor protein (TF) N8E86_02905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N8E86_02905 PF05698 Bacterial trigger factor protein (TF) C-terminus N8E86_02910 PF00574 Clp protease N8E86_02915 PF07724 AAA domain (Cdc48 subfamily) N8E86_02915 PF10431 C-terminal, D2-small domain, of ClpB protein N8E86_02915 PF06689 ClpX C4-type zinc finger N8E86_02920 PF10415 Fumarase C C-terminus N8E86_02920 PF00206 Lyase N8E86_02925 PF00501 AMP-binding enzyme N8E86_02930 PF00583 Acetyltransferase (GNAT) family N8E86_02935 PF03603 DNA polymerase III psi subunit N8E86_02940 PF10431 C-terminal, D2-small domain, of ClpB protein N8E86_02940 PF00004 ATPase family associated with various cellular activities (AAA) N8E86_02940 PF07724 AAA domain (Cdc48 subfamily) N8E86_02945 PF00227 Proteasome subunit N8E86_02950 PF01040 UbiA prenyltransferase family N8E86_02955 PF00581 Rhodanese-like domain N8E86_02960 PF05525 Branched-chain amino acid transport protein N8E86_02965 PF17674 HHH domain N8E86_02965 PF00575 S1 RNA binding domain N8E86_02965 PF09371 Tex-like protein N-terminal domain N8E86_02965 PF16921 Tex protein YqgF-like domain N8E86_02980 PF03449 Transcription elongation factor, N-terminal N8E86_02980 PF01272 Transcription elongation factor, GreA/GreB, C-term N8E86_02985 PF00440 Bacterial regulatory proteins, tetR family N8E86_02990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N8E86_02995 PF00873 AcrB/AcrD/AcrF family N8E86_03000 PF03932 CutC family N8E86_03005 PF02378 Phosphotransferase system, EIIC N8E86_03010 PF01112 Asparaginase N8E86_03015 PF00883 Cytosol aminopeptidase family, catalytic domain N8E86_03015 PF02789 Cytosol aminopeptidase family, N-terminal domain N8E86_03020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N8E86_03025 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit N8E86_03035 PF00113 Enolase, C-terminal TIM barrel domain N8E86_03035 PF03952 Enolase, N-terminal domain N8E86_03040 PF07119 Protein of unknown function (DUF1375) N8E86_03045 PF13361 UvrD-like helicase C-terminal domain N8E86_03045 PF00580 UvrD/REP helicase N-terminal domain N8E86_03065 PF00186 Dihydrofolate reductase N8E86_03070 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain N8E86_03070 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain N8E86_03085 PF01207 Dihydrouridine synthase (Dus) N8E86_03090 PF00654 Voltage gated chloride channel N8E86_03095 PF01048 Phosphorylase superfamily N8E86_03100 PF01676 Metalloenzyme superfamily N8E86_03105 PF07670 Nucleoside recognition N8E86_03105 PF07662 Na+ dependent nucleoside transporter C-terminus N8E86_03105 PF01773 Na+ dependent nucleoside transporter N-terminus N8E86_03110 PF10263 SprT-like family N8E86_03110 PF17283 SprT-like zinc ribbon domain N8E86_03120 PF00183 Hsp90 protein N8E86_03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E86_03130 PF01648 4'-phosphopantetheinyl transferase superfamily N8E86_03140 PF01145 SPFH domain / Band 7 family N8E86_03150 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) N8E86_03155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N8E86_03155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N8E86_03160 PF00271 Helicase conserved C-terminal domain N8E86_03160 PF04851 Type III restriction enzyme, res subunit N8E86_03160 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) N8E86_03160 PF08463 EcoEI R protein C-terminal N8E86_03170 PF02618 YceG-like family N8E86_03175 PF02223 Thymidylate kinase N8E86_03180 PF09115 DNA polymerase III, delta subunit, C terminal N8E86_03185 PF01026 TatD related DNase N8E86_03190 PF07509 Protein of unknown function (DUF1523) N8E86_03195 PF01595 Cyclin M transmembrane N-terminal domain N8E86_03195 PF00571 CBS domain N8E86_03195 PF03471 Transporter associated domain N8E86_03200 PF01197 Ribosomal protein L31 N8E86_03205 PF00271 Helicase conserved C-terminal domain N8E86_03205 PF00270 DEAD/DEAH box helicase N8E86_03205 PF17764 3′ DNA-binding domain (3′BD) N8E86_03205 PF18074 Primosomal protein N C-terminal domain N8E86_03205 PF18319 PriA DNA helicase Cys-rich region (CRR) domain N8E86_03210 PF05036 Sporulation related domain N8E86_03215 PF00174 Oxidoreductase molybdopterin binding domain N8E86_03220 PF01794 Ferric reductase like transmembrane component N8E86_03225 PF05958 tRNA (Uracil-5-)-methyltransferase N8E86_03230 PF00933 Glycosyl hydrolase family 3 N terminal domain N8E86_03240 PF01230 HIT domain N8E86_03245 PF01226 Formate/nitrite transporter N8E86_03250 PF01228 Glycine radical N8E86_03250 PF02901 Pyruvate formate lyase-like N8E86_03255 PF04055 Radical SAM superfamily N8E86_03260 PF01263 Aldose 1-epimerase N8E86_03265 PF10509 Galactokinase galactose-binding signature N8E86_03265 PF08544 GHMP kinases C terminal N8E86_03265 PF00288 GHMP kinases N terminal domain N8E86_03270 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain N8E86_03270 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain N8E86_03275 PF13407 Periplasmic binding protein domain N8E86_03280 PF00005 ABC transporter N8E86_03285 PF02653 Branched-chain amino acid transport system / permease component N8E86_03290 PF03918 Cytochrome C biogenesis protein N8E86_03295 PF03918 Cytochrome C biogenesis protein N8E86_03300 PF08534 Redoxin N8E86_03305 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal N8E86_03305 PF01578 Cytochrome C assembly protein N8E86_03310 PF03100 CcmE N8E86_03315 PF04995 Heme exporter protein D (CcmD) N8E86_03320 PF01578 Cytochrome C assembly protein N8E86_03325 PF03379 CcmB protein N8E86_03330 PF00005 ABC transporter N8E86_03335 PF00682 HMGL-like N8E86_03335 PF08502 LeuA allosteric (dimerisation) domain N8E86_03340 PF00180 Isocitrate/isopropylmalate dehydrogenase N8E86_03345 PF00330 Aconitase family (aconitate hydratase) N8E86_03350 PF00694 Aconitase C-terminal domain N8E86_03355 PF00308 Bacterial dnaA protein N8E86_03360 PF00860 Permease family N8E86_03370 PF04345 Chorismate lyase N8E86_03375 PF01502 Phosphoribosyl-AMP cyclohydrolase N8E86_03375 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase N8E86_03385 PF00977 Histidine biosynthesis protein N8E86_03390 PF00977 Histidine biosynthesis protein N8E86_03395 PF00578 AhpC/TSA family N8E86_03400 PF00117 Glutamine amidotransferase class-I N8E86_03405 PF06250 YhcG PDDEXK nuclease domain N8E86_03405 PF17761 DUF1016 N-terminal domain N8E86_03410 PF00475 Imidazoleglycerol-phosphate dehydratase N8E86_03420 PF00155 Aminotransferase class I and II N8E86_03430 PF00815 Histidinol dehydrogenase N8E86_03435 PF01634 ATP phosphoribosyltransferase N8E86_03435 PF08029 HisG, C-terminal domain N8E86_03440 PF08241 Methyltransferase domain N8E86_03445 PF03222 Tryptophan/tyrosine permease family N8E86_03450 PF00719 Inorganic pyrophosphatase N8E86_03455 PF01435 Peptidase family M48 N8E86_03455 PF07720 Tetratricopeptide repeat N8E86_03465 PF01476 LysM domain N8E86_03465 PF01551 Peptidase family M23 N8E86_03475 PF09335 SNARE associated Golgi protein N8E86_03480 PF01975 Survival protein SurE N8E86_03485 PF01142 tRNA pseudouridine synthase D (TruD) N8E86_03490 PF02542 YgbB family N8E86_03500 PF13419 Haloacid dehalogenase-like hydrolase N8E86_03505 PF14602 Hexapeptide repeat of succinyl-transferase N8E86_03505 PF12464 Maltose acetyltransferase N8E86_03515 PF02664 S-Ribosylhomocysteinase (LuxS) N8E86_03520 PF06969 HemN C-terminal domain N8E86_03520 PF04055 Radical SAM superfamily N8E86_03525 PF01725 Ham1 family N8E86_03535 PF00860 Permease family N8E86_03540 PF01370 NAD dependent epimerase/dehydratase family N8E86_03545 PF07690 Major Facilitator Superfamily N8E86_03550 PF01758 Sodium Bile acid symporter family N8E86_03555 PF18415 Histidine kinase receptor ArcB trans-membrane domain N8E86_03555 PF00989 PAS fold N8E86_03555 PF00072 Response regulator receiver domain N8E86_03555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E86_03555 PF01627 Hpt domain N8E86_03555 PF00512 His Kinase A (phospho-acceptor) domain N8E86_03560 PF01176 Translation initiation factor 1A / IF-1 N8E86_03570 PF12404 Peptidase N8E86_03570 PF00883 Cytosol aminopeptidase family, catalytic domain N8E86_03575 PF00334 Nucleoside diphosphate kinase N8E86_03580 PF00365 Phosphofructokinase N8E86_03585 PF16916 Dimerisation domain of Zinc Transporter N8E86_03585 PF01545 Cation efflux family N8E86_03595 PF03883 Peroxide stress protein YaaA N8E86_03600 PF03167 Uracil DNA glycosylase superfamily N8E86_03605 PF01228 Glycine radical N8E86_03610 PF00679 Elongation factor G C-terminus N8E86_03610 PF00009 Elongation factor Tu GTP binding domain N8E86_03610 PF03144 Elongation factor Tu domain 2 N8E86_03610 PF06421 GTP-binding protein LepA C-terminus N8E86_03615 PF10502 Signal peptidase, peptidase S26 N8E86_03620 PF00035 Double-stranded RNA binding motif N8E86_03620 PF14622 Ribonuclease-III-like N8E86_03625 PF07650 KH domain N8E86_03625 PF01926 50S ribosome-binding GTPase N8E86_03635 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal N8E86_03635 PF01926 50S ribosome-binding GTPase N8E86_03640 PF08461 Ribonuclease R winged-helix domain N8E86_03640 PF17876 Cold shock domain N8E86_03640 PF08206 Ribonuclease B OB domain N8E86_03640 PF00773 RNB domain N8E86_03640 PF00575 S1 RNA binding domain N8E86_03645 PF00588 SpoU rRNA Methylase family N8E86_03645 PF08032 RNA 2'-O ribose methyltransferase substrate binding N8E86_03650 PF07690 Major Facilitator Superfamily N8E86_03655 PF00529 HlyD membrane-fusion protein of T1SS N8E86_03655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N8E86_03660 PF01047 MarR family N8E86_03665 PF03601 Conserved hypothetical protein 698 N8E86_03670 PF08479 POTRA domain, ShlB-type N8E86_03670 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB N8E86_03670 PF17287 POTRA domain N8E86_03690 PF13018 Extended Signal Peptide of Type V secretion system N8E86_03690 PF13332 Hemagglutinin repeat N8E86_03690 PF05860 haemagglutination activity domain N8E86_03690 PF04829 Pre-toxin domain with VENN motif N8E86_03720 PF13332 Hemagglutinin repeat N8E86_03720 PF05860 haemagglutination activity domain N8E86_03720 PF15605 Bacterial toxin 28 N8E86_03720 PF04829 Pre-toxin domain with VENN motif N8E86_03735 PF14040 Deoxyribonuclease NucA/NucB N8E86_03750 PF01018 GTP1/OBG N8E86_03750 PF01926 50S ribosome-binding GTPase N8E86_03755 PF00892 EamA-like transporter family N8E86_03760 PF01016 Ribosomal L27 protein N8E86_03765 PF00829 Ribosomal prokaryotic L21 protein N8E86_03770 PF00348 Polyprenyl synthetase N8E86_03775 PF02677 Epoxyqueuosine reductase QueH N8E86_03780 PF00085 Thioredoxin N8E86_03785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N8E86_03785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N8E86_03790 PF01053 Cys/Met metabolism PLP-dependent enzyme N8E86_03810 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N8E86_03815 PF06508 Queuosine biosynthesis protein QueC N8E86_03820 PF01242 6-pyruvoyl tetrahydropterin synthase N8E86_03825 PF04055 Radical SAM superfamily N8E86_03830 PF01068 ATP dependent DNA ligase domain N8E86_03830 PF14743 DNA ligase OB-like domain N8E86_03835 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N8E86_03840 PF01979 Amidohydrolase family N8E86_03845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N8E86_03850 PF00303 Thymidylate synthase N8E86_03855 PF01790 Prolipoprotein diacylglyceryl transferase N8E86_03860 PF01925 Sulfite exporter TauE/SafE N8E86_03865 PF00293 NUDIX domain N8E86_03875 PF01510 N-acetylmuramoyl-L-alanine amidase N8E86_03880 PF07963 Prokaryotic N-terminal methylation motif N8E86_03885 PF00437 Type II/IV secretion system protein N8E86_03885 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N8E86_03890 PF00696 Amino acid kinase family N8E86_03895 PF01765 Ribosome recycling factor N8E86_03900 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain N8E86_03900 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase N8E86_03900 PF13288 DXP reductoisomerase C-terminal domain N8E86_03905 PF01255 Putative undecaprenyl diphosphate synthase N8E86_03915 PF02163 Peptidase family M50 N8E86_03920 PF07244 Surface antigen variable number repeat N8E86_03920 PF01103 Surface antigen N8E86_03925 PF03938 Outer membrane protein (OmpH-like) N8E86_03930 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD N8E86_03930 PF00132 Bacterial transferase hexapeptide (six repeats) N8E86_03935 PF07977 FabA-like domain N8E86_03940 PF00132 Bacterial transferase hexapeptide (six repeats) N8E86_03940 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 N8E86_03945 PF02684 Lipid-A-disaccharide synthetase N8E86_03950 PF01351 Ribonuclease HII N8E86_03960 PF14840 Processivity clamp loader gamma complex DNA pol III C-term N8E86_03960 PF06144 DNA polymerase III, delta subunit N8E86_03965 PF04390 Lipopolysaccharide-assembly N8E86_03970 PF00133 tRNA synthetases class I (I, L, M and V) N8E86_03970 PF13603 Leucyl-tRNA synthetase, Domain 2 N8E86_03970 PF08264 Anticodon-binding domain of tRNA N8E86_03975 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) N8E86_03980 PF00149 Calcineurin-like phosphoesterase N8E86_03985 PF00398 Ribosomal RNA adenine dimethylase N8E86_03990 PF00639 PPIC-type PPIASE domain N8E86_03990 PF09312 SurA N-terminal domain N8E86_03995 PF00156 Phosphoribosyl transferase domain N8E86_04000 PF00551 Formyl transferase N8E86_04005 PF00586 AIR synthase related protein, N-terminal domain N8E86_04005 PF02769 AIR synthase related protein, C-terminal domain N8E86_04025 PF00929 Exonuclease N8E86_04030 PF00075 RNase H N8E86_04035 PF01238 Phosphomannose isomerase type I N8E86_04040 PF06173 Protein of unknown function (DUF986) N8E86_04045 PF03613 PTS system mannose/fructose/sorbose family IID component N8E86_04050 PF03609 PTS system sorbose-specific iic component N8E86_04055 PF03610 PTS system fructose IIA component N8E86_04055 PF03830 PTS system sorbose subfamily IIB component N8E86_04060 PF00482 Type II secretion system (T2SS), protein F N8E86_04070 PF01121 Dephospho-CoA kinase N8E86_04075 PF03884 DNA gyrase inhibitor YacG N8E86_04085 PF01235 Sodium:alanine symporter family N8E86_04090 PF02627 Carboxymuconolactone decarboxylase family N8E86_04095 PF02311 AraC-like ligand binding domain N8E86_04095 PF12833 Helix-turn-helix domain N8E86_04100 PF10063 Uncharacterized integral membrane protein (DUF2301) N8E86_04105 PF05175 Methyltransferase small domain N8E86_04105 PF08468 Methyltransferase small domain N-terminal N8E86_04110 PF06472 ABC transporter transmembrane region 2 N8E86_04110 PF00005 ABC transporter N8E86_04115 PF06826 Predicted Permease Membrane Region N8E86_04115 PF02080 TrkA-C domain N8E86_04120 PF02462 Opacity family porin protein N8E86_04125 PF01553 Acyltransferase N8E86_04130 PF00717 Peptidase S24-like N8E86_04130 PF01726 LexA DNA binding domain N8E86_04135 PF00171 Aldehyde dehydrogenase family N8E86_04135 PF00465 Iron-containing alcohol dehydrogenase N8E86_04140 PF00578 AhpC/TSA family N8E86_04145 PF00701 Dihydrodipicolinate synthetase family N8E86_04150 PF06804 NlpB/DapX lipoprotein N8E86_04155 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ N8E86_04160 PF07992 Pyridine nucleotide-disulphide oxidoreductase N8E86_04160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N8E86_04165 PF00004 ATPase family associated with various cellular activities (AAA) N8E86_04165 PF05362 Lon protease (S16) C-terminal proteolytic domain N8E86_04165 PF02190 ATP-dependent protease La (LON) substrate-binding domain N8E86_04170 PF13145 PPIC-type PPIASE domain N8E86_04175 PF00318 Ribosomal protein S2 N8E86_04180 PF00889 Elongation factor TS N8E86_04185 PF00009 Elongation factor Tu GTP binding domain N8E86_04185 PF03144 Elongation factor Tu domain 2 N8E86_04185 PF16658 Class II release factor RF3, C-terminal domain N8E86_04190 PF01259 SAICAR synthetase N8E86_04205 PF01370 NAD dependent epimerase/dehydratase family N8E86_04210 PF00764 Arginosuccinate synthase N8E86_04215 PF04393 Protein of unknown function (DUF535) N8E86_04220 PF00675 Insulinase (Peptidase family M16) N8E86_04220 PF05193 Peptidase M16 inactive domain N8E86_04225 PF07715 TonB-dependent Receptor Plug Domain N8E86_04230 PF02224 Cytidylate kinase N8E86_04235 PF00575 S1 RNA binding domain N8E86_04240 PF00216 Bacterial DNA-binding protein N8E86_04245 PF06305 Lipopolysaccharide assembly protein A domain N8E86_04250 PF18073 Rubredoxin metal binding domain N8E86_04255 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N8E86_04260 PF01253 Translation initiation factor SUI1 N8E86_04265 PF14572 Phosphoribosyl synthetase-associated domain N8E86_04265 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N8E86_04270 PF08544 GHMP kinases C terminal N8E86_04270 PF00288 GHMP kinases N terminal domain N8E86_04275 PF03550 Outer membrane lipoprotein LolB N8E86_04280 PF00072 Response regulator receiver domain N8E86_04280 PF00486 Transcriptional regulatory protein, C terminal N8E86_04285 PF00464 Serine hydroxymethyltransferase N8E86_04290 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain N8E86_04290 PF02843 Phosphoribosylglycinamide synthetase, C domain N8E86_04290 PF02844 Phosphoribosylglycinamide synthetase, N domain N8E86_04300 PF01808 AICARFT/IMPCHase bienzyme N8E86_04300 PF02142 MGS-like domain N8E86_04305 PF07681 DoxX N8E86_04315 PF02683 Cytochrome C biogenesis protein transmembrane region N8E86_04315 PF00085 Thioredoxin N8E86_04315 PF11412 Disulphide bond corrector protein DsbC N8E86_04320 PF01197 Ribosomal protein L31 N8E86_04325 PF00444 Ribosomal protein L36 N8E86_04330 PF00005 ABC transporter N8E86_04335 PF00005 ABC transporter N8E86_04335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N8E86_04340 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_04340 PF12911 N-terminal TM domain of oligopeptide transport permease C N8E86_04345 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_04350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N8E86_04355 PF04317 YcjX-like family, DUF463 N8E86_04360 PF05128 Domain of unknown function (DUF697) N8E86_04365 PF18024 Helix-turn-helix domain N8E86_04365 PF00158 Sigma-54 interaction domain N8E86_04370 PF13520 Amino acid permease N8E86_04380 PF06071 Protein of unknown function (DUF933) N8E86_04380 PF01926 50S ribosome-binding GTPase N8E86_04385 PF01195 Peptidyl-tRNA hydrolase N8E86_04390 PF03364 Polyketide cyclase / dehydrase and lipid transport N8E86_04395 PF03658 RnfH family Ubiquitin N8E86_04400 PF08007 Cupin superfamily protein N8E86_04405 PF02601 Exonuclease VII, large subunit N8E86_04405 PF13742 OB-fold nucleic acid binding domain N8E86_04410 PF01668 SmpB protein N8E86_04415 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase N8E86_04420 PF01551 Peptidase family M23 N8E86_04420 PF04225 Opacity-associated protein A LysM-like domain N8E86_04425 PF00005 ABC transporter N8E86_04430 PF00950 ABC 3 transport family N8E86_04455 PF11867 Domain of unknown function (DUF3387) N8E86_04455 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N8E86_04455 PF18766 SWI2/SNF2 ATPase N8E86_04465 PF01420 Type I restriction modification DNA specificity domain N8E86_04480 PF00012 Hsp70 protein N8E86_04485 PF00684 DnaJ central domain N8E86_04485 PF00226 DnaJ domain N8E86_04485 PF01556 DnaJ C terminal domain N8E86_04490 PF07670 Nucleoside recognition N8E86_04505 PF05198 Translation initiation factor IF-3, N-terminal domain N8E86_04505 PF00707 Translation initiation factor IF-3, C-terminal domain N8E86_04510 PF01632 Ribosomal protein L35 N8E86_04515 PF00453 Ribosomal protein L20 N8E86_04525 PF11898 Domain of unknown function (DUF3418) N8E86_04525 PF04408 Helicase associated domain (HA2) N8E86_04525 PF00271 Helicase conserved C-terminal domain N8E86_04525 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N8E86_04525 PF00270 DEAD/DEAH box helicase N8E86_04530 PF13276 HTH-like domain N8E86_04530 PF00665 Integrase core domain N8E86_04530 PF13333 Integrase core domain N8E86_04540 PF13693 Winged helix-turn-helix DNA-binding N8E86_04545 PF09039 Mu DNA binding, I gamma subdomain N8E86_04545 PF09299 Mu transposase, C-terminal N8E86_04545 PF02914 Bacteriophage Mu transposase N8E86_04545 PF02316 Mu DNA-binding domain N8E86_04550 PF09077 Mu B transposition protein, C terminal N8E86_04550 PF13401 AAA domain N8E86_04570 PF07352 Bacteriophage Mu Gam like protein N8E86_04600 PF06252 Protein of unknown function (DUF1018) N8E86_04605 PF08765 Mor transcription activator family N8E86_04615 PF01510 N-acetylmuramoyl-L-alanine amidase N8E86_04620 PF10841 Protein of unknown function (DUF2644) N8E86_04630 PF10805 Protein of unknown function (DUF2730) N8E86_04635 PF08461 Ribonuclease R winged-helix domain N8E86_04640 PF11985 Protein of unknown function (DUF3486) N8E86_04645 PF03237 Terminase-like family N8E86_04650 PF06074 Protein of unknown function (DUF935) N8E86_04655 PF04233 Phage Mu protein F like protein N8E86_04670 PF10123 Mu-like prophage I protein N8E86_04675 PF10124 Mu-like prophage major head subunit gpT N8E86_04680 PF17891 Mu-like prophage FluMu N-terminal domain N8E86_04680 PF12949 HeH/LEM domain N8E86_04685 PF07030 Protein of unknown function (DUF1320) N8E86_04690 PF08873 Domain of unknown function (DUF1834) N8E86_04695 PF10948 Protein of unknown function (DUF2635) N8E86_04700 PF17482 Phage tail sheath C-terminal domain N8E86_04700 PF04984 Phage tail sheath protein subtilisin-like domain N8E86_04705 PF10618 Phage tail tube protein N8E86_04710 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 N8E86_04720 PF07157 DNA circularisation protein N-terminus N8E86_04735 PF06890 Bacteriophage Mu Gp45 protein N8E86_04740 PF07409 Phage protein GP46 N8E86_04745 PF04865 Baseplate J-like protein N8E86_04750 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) N8E86_04815 PF00939 Sodium:sulfate symporter transmembrane region N8E86_04820 PF01717 Cobalamin-independent synthase, Catalytic domain N8E86_04820 PF08267 Cobalamin-independent synthase, N-terminal domain N8E86_04825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E86_04825 PF03466 LysR substrate binding domain N8E86_04830 PF03591 AzlC protein N8E86_04835 PF05437 Branched-chain amino acid transport protein (AzlD) N8E86_04840 PF00593 TonB dependent receptor N8E86_04840 PF07715 TonB-dependent Receptor Plug Domain N8E86_04850 PF04216 Protein involved in formate dehydrogenase formation N8E86_04855 PF01292 Prokaryotic cytochrome b561 N8E86_04860 PF13247 4Fe-4S dicluster domain N8E86_04860 PF09163 Formate dehydrogenase N, transmembrane N8E86_04870 PF02634 FdhD/NarQ family N8E86_04880 PF00403 Heavy-metal-associated domain N8E86_04885 PF04284 Protein of unknown function (DUF441) N8E86_04890 PF13520 Amino acid permease N8E86_04895 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain N8E86_04895 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain N8E86_04895 PF01276 Orn/Lys/Arg decarboxylase, major domain N8E86_04900 PF10940 Protein of unknown function (DUF2618) N8E86_04925 PF06594 Haemolysin-type calcium binding protein related domain N8E86_04925 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) N8E86_04930 PF00664 ABC transporter transmembrane region N8E86_04930 PF00005 ABC transporter N8E86_04930 PF03412 Peptidase C39 family N8E86_04940 PF00999 Sodium/hydrogen exchanger family N8E86_04945 PF03372 Endonuclease/Exonuclease/phosphatase family N8E86_04950 PF01042 Endoribonuclease L-PSP N8E86_04955 PF14256 YwiC-like protein N8E86_04960 PF02540 NAD synthase N8E86_04960 PF00958 GMP synthase C terminal domain N8E86_04960 PF00117 Glutamine amidotransferase class-I N8E86_04975 PF00478 IMP dehydrogenase / GMP reductase domain N8E86_04975 PF00571 CBS domain N8E86_04980 PF02237 Biotin protein ligase C terminal domain N8E86_04980 PF03099 Biotin/lipoate A/B protein ligase family N8E86_05030 PF00290 Tryptophan synthase alpha chain N8E86_05035 PF00291 Pyridoxal-phosphate dependent enzyme N8E86_05040 PF00218 Indole-3-glycerol phosphate synthase N8E86_05040 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase N8E86_05045 PF02885 Glycosyl transferase family, helical bundle domain N8E86_05045 PF00591 Glycosyl transferase family, a/b domain N8E86_05050 PF14552 Tautomerase enzyme N8E86_05055 PF00117 Glutamine amidotransferase class-I N8E86_05060 PF00425 chorismate binding enzyme N8E86_05060 PF04715 Anthranilate synthase component I, N terminal region N8E86_05065 PF10415 Fumarase C C-terminus N8E86_05065 PF00206 Lyase N8E86_05070 PF04364 DNA polymerase III chi subunit, HolC N8E86_05075 PF13673 Acetyltransferase (GNAT) domain N8E86_05100 PF08264 Anticodon-binding domain of tRNA N8E86_05100 PF00133 tRNA synthetases class I (I, L, M and V) N8E86_05100 PF10458 Valyl tRNA synthetase tRNA binding arm N8E86_05105 PF01066 CDP-alcohol phosphatidyltransferase N8E86_05125 PF07690 Major Facilitator Superfamily N8E86_05140 PF01965 DJ-1/PfpI family N8E86_05145 PF00106 short chain dehydrogenase N8E86_05150 PF00893 Small Multidrug Resistance protein N8E86_05160 PF04247 Invasion gene expression up-regulator, SirB N8E86_05165 PF00521 DNA gyrase/topoisomerase IV, subunit A N8E86_05165 PF03989 DNA gyrase C-terminal domain, beta-propeller N8E86_05175 PF01475 Ferric uptake regulator family N8E86_05180 PF00258 Flavodoxin N8E86_05185 PF01402 Ribbon-helix-helix protein, copG family N8E86_05190 PF00561 alpha/beta hydrolase fold N8E86_05195 PF03925 SeqA protein C-terminal domain N8E86_05195 PF17206 SeqA protein N-terminal domain N8E86_05200 PF00501 AMP-binding enzyme N8E86_05205 PF00924 Mechanosensitive ion channel N8E86_05205 PF12795 Mechanosensitive ion channel porin domain N8E86_05205 PF12794 Mechanosensitive ion channel inner membrane domain 1 N8E86_05210 PF01264 Chorismate synthase N8E86_05215 PF03411 Penicillin-insensitive murein endopeptidase N8E86_05220 PF01925 Sulfite exporter TauE/SafE N8E86_05225 PF03279 Bacterial lipid A biosynthesis acyltransferase N8E86_05230 PF00156 Phosphoribosyl transferase domain N8E86_05235 PF12169 DNA polymerase III subunits gamma and tau domain III N8E86_05235 PF12170 DNA polymerase III tau subunit V interacting with alpha N8E86_05240 PF02554 Carbon starvation protein CstA N8E86_05245 PF13416 Bacterial extracellular solute-binding protein N8E86_05250 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_05255 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_05260 PF08402 TOBE domain N8E86_05260 PF00005 ABC transporter N8E86_05265 PF07687 Peptidase dimerisation domain N8E86_05265 PF01546 Peptidase family M20/M25/M40 N8E86_05270 PF08335 GlnD PII-uridylyltransferase N8E86_05270 PF03710 Glutamate-ammonia ligase adenylyltransferase N8E86_05280 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_05285 PF00005 ABC transporter N8E86_05290 PF04055 Radical SAM superfamily N8E86_05290 PF06968 Biotin and Thiamin Synthesis associated domain N8E86_05295 PF00027 Cyclic nucleotide-binding domain N8E86_05300 PF01925 Sulfite exporter TauE/SafE N8E86_05310 PF09093 Lyase, catalytic N8E86_05310 PF09092 Lyase, N terminal N8E86_05310 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain N8E86_05310 PF02278 Polysaccharide lyase family 8, super-sandwich domain N8E86_05315 PF03616 Sodium/glutamate symporter N8E86_05320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E86_05320 PF03459 TOBE domain N8E86_05330 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_05340 PF00750 tRNA synthetases class I (R) N8E86_05340 PF05746 DALR anticodon binding domain N8E86_05340 PF03485 Arginyl tRNA synthetase N terminal domain N8E86_05345 PF06185 YecM protein N8E86_05350 PF00419 Fimbrial protein N8E86_05355 PF02753 Pili assembly chaperone PapD, C-terminal domain N8E86_05355 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain N8E86_05360 PF13953 PapC C-terminal domain N8E86_05360 PF00577 Outer membrane usher protein N8E86_05360 PF13954 PapC N-terminal domain N8E86_05370 PF00772 DnaB-like helicase N terminal domain N8E86_05370 PF03796 DnaB-like helicase C terminal domain N8E86_05375 PF01168 Alanine racemase, N-terminal domain N8E86_05375 PF00842 Alanine racemase, C-terminal domain N8E86_05380 PF00342 Phosphoglucose isomerase N8E86_05390 PF00717 Peptidase S24-like N8E86_05395 PF00375 Sodium:dicarboxylate symporter family N8E86_05400 PF13609 Gram-negative porin N8E86_05405 PF13609 Gram-negative porin N8E86_05410 PF13609 Gram-negative porin N8E86_05415 PF13649 Methyltransferase domain N8E86_05420 PF02938 GAD domain N8E86_05420 PF00152 tRNA synthetases class II (D, K and N) N8E86_05420 PF01336 OB-fold nucleic acid binding domain N8E86_05425 PF00293 NUDIX domain N8E86_05430 PF01709 Transcriptional regulator N8E86_05435 PF02075 Crossover junction endodeoxyribonuclease RuvC N8E86_05440 PF07499 RuvA, C-terminal domain N8E86_05440 PF01330 RuvA N terminal domain N8E86_05445 PF05491 RuvB C-terminal winged helix domain N8E86_05445 PF05496 Holliday junction DNA helicase RuvB P-loop domain N8E86_05445 PF17864 RuvB AAA lid domain N8E86_05450 PF02595 Glycerate kinase family N8E86_05455 PF02447 GntP family permease N8E86_05460 PF17853 GGDEF-like domain N8E86_05460 PF05651 Putative sugar diacid recognition N8E86_05460 PF13556 PucR C-terminal helix-turn-helix domain N8E86_05465 PF00312 Ribosomal protein S15 N8E86_05470 PF00155 Aminotransferase class I and II N8E86_05475 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain N8E86_05475 PF02222 ATP-grasp domain N8E86_05480 PF00484 Carbonic anhydrase N8E86_05485 PF01384 Phosphate transporter family N8E86_05490 PF01865 Protein of unknown function DUF47 N8E86_05495 PF01928 CYTH domain N8E86_05500 PF18073 Rubredoxin metal binding domain N8E86_05505 PF03797 Autotransporter beta-domain N8E86_05505 PF02395 Immunoglobulin A1 protease N8E86_05505 PF03212 Pertactin N8E86_05515 PF02581 Thiamine monophosphate synthase N8E86_05520 PF08543 Phosphomethylpyrimidine kinase N8E86_05525 PF02110 Hydroxyethylthiazole kinase family N8E86_05530 PF00753 Metallo-beta-lactamase superfamily N8E86_05530 PF13567 Domain of unknown function (DUF4131) N8E86_05530 PF03772 Competence protein N8E86_05535 PF00005 ABC transporter N8E86_05535 PF00664 ABC transporter transmembrane region N8E86_05540 PF02606 Tetraacyldisaccharide-1-P 4'-kinase N8E86_05545 PF03966 Trm112p-like protein N8E86_05550 PF02348 Cytidylyltransferase N8E86_05555 PF09084 NMT1/THI5 like N8E86_05560 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_05565 PF00005 ABC transporter N8E86_05570 PF02151 UvrB/uvrC motif N8E86_05570 PF08459 UvrC Helix-hairpin-helix N-terminal N8E86_05570 PF01541 GIY-YIG catalytic domain N8E86_05575 PF09335 SNARE associated Golgi protein N8E86_05580 PF01386 Ribosomal L25p family N8E86_05590 PF02753 Pili assembly chaperone PapD, C-terminal domain N8E86_05590 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain N8E86_05595 PF00577 Outer membrane usher protein N8E86_05595 PF13954 PapC N-terminal domain N8E86_05595 PF13953 PapC C-terminal domain N8E86_05610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N8E86_05610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N8E86_05615 PF01554 MatE N8E86_05620 PF00677 Lumazine binding domain N8E86_05630 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit N8E86_05640 PF00925 GTP cyclohydrolase II N8E86_05645 PF01569 PAP2 superfamily N8E86_05650 PF00480 ROK family N8E86_05695 PF01235 Sodium:alanine symporter family N8E86_05710 PF17384 RimP C-terminal SH3 domain N8E86_05710 PF02576 RimP N-terminal domain N8E86_05715 PF00575 S1 RNA binding domain N8E86_05715 PF13184 NusA-like KH domain N8E86_05715 PF08529 NusA N-terminal domain N8E86_05720 PF08364 Bacterial translation initiation factor IF-2 associated region N8E86_05720 PF11987 Translation-initiation factor 2 N8E86_05720 PF00009 Elongation factor Tu GTP binding domain N8E86_05720 PF04760 Translation initiation factor IF-2, N-terminal region N8E86_05725 PF02033 Ribosome-binding factor A N8E86_05730 PF16198 tRNA pseudouridylate synthase B C-terminal domain N8E86_05730 PF01509 TruB family pseudouridylate synthase (N terminal domain) N8E86_05730 PF09157 Pseudouridine synthase II TruB, C-terminal N8E86_05735 PF06434 Aconitate hydratase 2 N-terminus N8E86_05735 PF11791 Aconitate B N-terminal domain N8E86_05735 PF00330 Aconitase family (aconitate hydratase) N8E86_05740 PF03795 YCII-related domain N8E86_05745 PF03061 Thioesterase superfamily N8E86_05750 PF04279 Intracellular septation protein A N8E86_05760 PF03922 OmpW family N8E86_05765 PF00762 Ferrochelatase N8E86_05770 PF03061 Thioesterase superfamily N8E86_05775 PF01565 FAD binding domain N8E86_05775 PF13183 4Fe-4S dicluster domain N8E86_05775 PF02913 FAD linked oxidases, C-terminal domain N8E86_05780 PF01389 OmpA-like transmembrane domain N8E86_05780 PF00691 OmpA family N8E86_05785 PF04011 LemA family N8E86_05800 PF00462 Glutaredoxin N8E86_05830 PF08239 Bacterial SH3 domain N8E86_05835 PF12627 Probable RNA and SrmB- binding site of polymerase A N8E86_05835 PF01743 Poly A polymerase head domain N8E86_05835 PF01966 HD domain N8E86_05840 PF08942 Domain of unknown function (DUF1919) N8E86_05845 PF02682 Carboxyltransferase domain, subdomain C and D N8E86_05850 PF02626 Carboxyltransferase domain, subdomain A and B N8E86_05855 PF03746 LamB/YcsF family N8E86_05860 PF01566 Natural resistance-associated macrophage protein N8E86_05865 PF01136 Peptidase family U32 N8E86_05865 PF16325 Peptidase family U32 C-terminal domain N8E86_05870 PF13419 Haloacid dehalogenase-like hydrolase N8E86_05875 PF02219 Methylenetetrahydrofolate reductase N8E86_05885 PF03372 Endonuclease/Exonuclease/phosphatase family N8E86_05890 PF00196 Bacterial regulatory proteins, luxR family N8E86_05890 PF00072 Response regulator receiver domain N8E86_05895 PF01343 Peptidase family S49 N8E86_05895 PF08496 Peptidase family S49 N-terminal N8E86_05905 PF00149 Calcineurin-like phosphoesterase N8E86_05910 PF02867 Ribonucleotide reductase, barrel domain N8E86_05910 PF03477 ATP cone domain N8E86_05910 PF00317 Ribonucleotide reductase, all-alpha domain N8E86_05915 PF06965 Na+/H+ antiporter 1 N8E86_05920 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N8E86_05925 PF00578 AhpC/TSA family N8E86_05930 PF06733 DEAD_2 N8E86_05930 PF13307 Helicase C-terminal domain N8E86_05935 PF00814 Glycoprotease family N8E86_05940 PF13193 AMP-binding enzyme C-terminal domain N8E86_05940 PF00501 AMP-binding enzyme N8E86_05945 PF00570 HRDC domain N8E86_05945 PF01612 3'-5' exonuclease N8E86_05960 PF00005 ABC transporter N8E86_05960 PF00664 ABC transporter transmembrane region N8E86_05965 PF00664 ABC transporter transmembrane region N8E86_05965 PF00005 ABC transporter N8E86_05970 PF07992 Pyridine nucleotide-disulphide oxidoreductase N8E86_05980 PF02447 GntP family permease N8E86_05985 PF01202 Shikimate kinase N8E86_05990 PF00005 ABC transporter N8E86_05990 PF16326 ABC transporter C-terminal domain N8E86_05990 PF12848 ABC transporter N8E86_05995 PF00209 Sodium:neurotransmitter symporter family N8E86_06000 PF10576 Iron-sulfur binding domain of endonuclease III N8E86_06000 PF00633 Helix-hairpin-helix motif N8E86_06000 PF00730 HhH-GPD superfamily base excision DNA repair protein N8E86_06005 PF02508 Rnf-Nqr subunit, membrane protein N8E86_06010 PF04205 FMN-binding domain N8E86_06015 PF03116 NQR2, RnfD, RnfE family N8E86_06020 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit N8E86_06020 PF13375 RnfC Barrel sandwich hybrid domain N8E86_06020 PF13237 4Fe-4S dicluster domain N8E86_06025 PF04060 Putative Fe-S cluster N8E86_06030 PF02508 Rnf-Nqr subunit, membrane protein N8E86_06035 PF08338 Domain of unknown function (DUF1731) N8E86_06035 PF01370 NAD dependent epimerase/dehydratase family N8E86_06040 PF01316 Arginine repressor, DNA binding domain N8E86_06040 PF02863 Arginine repressor, C-terminal domain N8E86_06045 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N8E86_06045 PF00056 lactate/malate dehydrogenase, NAD binding domain N8E86_06060 PF00571 CBS domain N8E86_06060 PF01380 SIS domain N8E86_06070 PF05175 Methyltransferase small domain N8E86_06075 PF01713 Smr domain N8E86_06080 PF01416 tRNA pseudouridine synthase N8E86_06085 PF01039 Carboxyl transferase domain N8E86_06085 PF17848 Acetyl-coA carboxylase zinc finger domain N8E86_06090 PF08245 Mur ligase middle domain N8E86_06095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N8E86_06095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N8E86_06100 PF03701 Uncharacterised protein family (UPF0181) N8E86_06105 PF00313 'Cold-shock' DNA-binding domain N8E86_06120 PF00356 Bacterial regulatory proteins, lacI family N8E86_06120 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N8E86_06125 PF00586 AIR synthase related protein, N-terminal domain N8E86_06125 PF02769 AIR synthase related protein, C-terminal domain N8E86_06130 PF06303 MatP N-terminal domain N8E86_06130 PF17414 MatP C-terminal ribbon-helix-helix domain N8E86_06135 PF13654 AAA domain N8E86_06135 PF05362 Lon protease (S16) C-terminal proteolytic domain N8E86_06140 PF07977 FabA-like domain N8E86_06145 PF04073 Aminoacyl-tRNA editing domain N8E86_06155 PF00860 Permease family N8E86_06160 PF02635 DsrE/DsrF-like family N8E86_06165 PF12705 PD-(D/E)XK nuclease superfamily N8E86_06165 PF00580 UvrD/REP helicase N-terminal domain N8E86_06165 PF13361 UvrD-like helicase C-terminal domain N8E86_06170 PF13538 UvrD-like helicase C-terminal domain N8E86_06175 PF13018 Extended Signal Peptide of Type V secretion system N8E86_06175 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin N8E86_06175 PF03895 YadA-like membrane anchor domain N8E86_06175 PF05662 Coiled stalk of trimeric autotransporter adhesin N8E86_06180 PF01336 OB-fold nucleic acid binding domain N8E86_06180 PF00152 tRNA synthetases class II (D, K and N) N8E86_06185 PF01047 MarR family N8E86_06185 PF00480 ROK family N8E86_06195 PF01842 ACT domain N8E86_06195 PF00551 Formyl transferase N8E86_06200 PF00300 Histidine phosphatase superfamily (branch 1) N8E86_06205 PF13396 Phospholipase_D-nuclease N-terminal N8E86_06205 PF13091 PLD-like domain N8E86_06210 PF00849 RNA pseudouridylate synthase N8E86_06215 PF01409 tRNA synthetases class II core domain (F) N8E86_06215 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain N8E86_06220 PF03484 tRNA synthetase B5 domain N8E86_06220 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain N8E86_06220 PF01588 Putative tRNA binding domain N8E86_06220 PF03147 Ferredoxin-fold anticodon binding domain N8E86_06220 PF03483 B3/4 domain N8E86_06225 PF00216 Bacterial DNA-binding protein N8E86_06230 PF00877 NlpC/P60 family N8E86_06235 PF01171 PP-loop family N8E86_06240 PF03882 MukF winged-helix domain N8E86_06240 PF17193 MukF C-terminal domain N8E86_06240 PF17192 MukF middle domain N8E86_06245 PF04288 MukE-like family N8E86_06250 PF04310 MukB N-terminal N8E86_06250 PF16330 MukB hinge domain N8E86_06260 PF00929 Exonuclease N8E86_06260 PF08411 Exonuclease C-terminal N8E86_06275 PF04386 Stringent starvation protein B N8E86_06280 PF00043 Glutathione S-transferase, C-terminal domain N8E86_06280 PF13417 Glutathione S-transferase, N-terminal domain N8E86_06285 PF00380 Ribosomal protein S9/S16 N8E86_06290 PF00572 Ribosomal protein L13 N8E86_06295 PF00849 RNA pseudouridylate synthase N8E86_06300 PF04287 tRNA pseudouridine synthase C N8E86_06305 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) N8E86_06310 PF14489 QueF-like protein N8E86_06310 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term N8E86_06315 PF11892 Domain of unknown function (DUF3412) N8E86_06315 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases N8E86_06315 PF03641 Possible lysine decarboxylase N8E86_06320 PF00535 Glycosyl transferase family 2 N8E86_06325 PF01061 ABC-2 type transporter N8E86_06330 PF00005 ABC transporter N8E86_06335 PF04315 Elongation factor P hydroxylase N8E86_06340 PF01435 Peptidase family M48 N8E86_06345 PF00817 impB/mucB/samB family N8E86_06345 PF11798 IMS family HHH motif N8E86_06350 PF00343 Carbohydrate phosphorylase N8E86_06355 PF00534 Glycosyl transferases group 1 N8E86_06355 PF08323 Starch synthase catalytic domain N8E86_06360 PF00483 Nucleotidyl transferase N8E86_06365 PF00128 Alpha amylase, catalytic domain N8E86_06365 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N8E86_06365 PF18390 Glycogen debranching enzyme C-terminal domain N8E86_06370 PF00128 Alpha amylase, catalytic domain N8E86_06370 PF02806 Alpha amylase, C-terminal all-beta domain N8E86_06370 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N8E86_06375 PF02446 4-alpha-glucanotransferase N8E86_06380 PF05656 Protein of unknown function (DUF805) N8E86_06390 PF00749 tRNA synthetases class I (E and Q), catalytic domain N8E86_06390 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain N8E86_06395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N8E86_06400 PF00005 ABC transporter N8E86_06400 PF12704 MacB-like periplasmic core domain N8E86_06400 PF02687 FtsX-like permease family N8E86_06405 PF02321 Outer membrane efflux protein N8E86_06415 PF07992 Pyridine nucleotide-disulphide oxidoreductase N8E86_06415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N8E86_06420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N8E86_06420 PF00364 Biotin-requiring enzyme N8E86_06420 PF02817 e3 binding domain N8E86_06425 PF17831 Pyruvate dehydrogenase E1 component middle domain N8E86_06425 PF00456 Transketolase, thiamine diphosphate binding domain N8E86_06430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N8E86_06435 PF05524 PEP-utilising enzyme, N-terminal N8E86_06435 PF00391 PEP-utilising enzyme, mobile domain N8E86_06435 PF02896 PEP-utilising enzyme, TIM barrel domain N8E86_06440 PF00381 PTS HPr component phosphorylation site N8E86_06445 PF03193 RsgA GTPase N8E86_06450 PF00929 Exonuclease N8E86_06465 PF00472 RF-1 domain N8E86_06465 PF03462 PCRF domain N8E86_06470 PF02403 Seryl-tRNA synthetase N-terminal domain N8E86_06470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N8E86_06475 PF00004 ATPase family associated with various cellular activities (AAA) N8E86_06475 PF12002 MgsA AAA+ ATPase C terminal N8E86_06475 PF16193 AAA C-terminal domain N8E86_06480 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB N8E86_06485 PF01381 Helix-turn-helix N8E86_06490 PF03548 Outer membrane lipoprotein carrier protein LolA N8E86_06495 PF01580 FtsK/SpoIIIE family N8E86_06495 PF09397 Ftsk gamma domain N8E86_06495 PF17854 FtsK alpha domain N8E86_06495 PF13491 4TM region of DNA translocase FtsK/SpoIIIE N8E86_06500 PF01037 Lrp/AsnC ligand binding domain N8E86_06505 PF13286 Phosphohydrolase-associated domain N8E86_06505 PF01966 HD domain N8E86_06510 PF04172 LrgB-like family N8E86_06515 PF03788 LrgA family N8E86_06520 PF00565 Staphylococcal nuclease homologue N8E86_06525 PF00266 Aminotransferase class-V N8E86_06530 PF02657 Fe-S metabolism associated domain N8E86_06535 PF16036 Chalcone isomerase-like N8E86_06540 PF05728 Uncharacterised protein family (UPF0227) N8E86_06545 PF08443 RimK-like ATP-grasp domain N8E86_06545 PF18030 RimK PreATP-grasp domain N8E86_06550 PF00462 Glutaredoxin N8E86_06555 PF00696 Amino acid kinase family N8E86_06555 PF00583 Acetyltransferase (GNAT) family N8E86_06560 PF00171 Aldehyde dehydrogenase family N8E86_06565 PF01258 Prokaryotic dksA/traR C4-type zinc finger N8E86_06570 PF01743 Poly A polymerase head domain N8E86_06570 PF12627 Probable RNA and SrmB- binding site of polymerase A N8E86_06570 PF12626 Polymerase A arginine-rich C-terminus N8E86_06575 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N8E86_06580 PF02568 Thiamine biosynthesis protein (ThiI) N8E86_06580 PF02926 THUMP domain N8E86_06590 PF00348 Polyprenyl synthetase N8E86_06595 PF13292 1-deoxy-D-xylulose-5-phosphate synthase N8E86_06595 PF02779 Transketolase, pyrimidine binding domain N8E86_06595 PF02780 Transketolase, C-terminal domain N8E86_06600 PF01985 CRS1 / YhbY (CRM) domain N8E86_06605 PF01272 Transcription elongation factor, GreA/GreB, C-term N8E86_06605 PF03449 Transcription elongation factor, N-terminal N8E86_06610 PF00111 2Fe-2S iron-sulfur cluster binding domain N8E86_06610 PF03473 MOSC domain N8E86_06610 PF03476 MOSC N-terminal beta barrel domain N8E86_06615 PF04299 Putative FMN-binding domain N8E86_06625 PF02153 Prephenate dehydrogenase N8E86_06625 PF01817 Chorismate mutase type II N8E86_06630 PF00793 DAHP synthetase I family N8E86_06635 PF02811 PHP domain N8E86_06640 PF01180 Dihydroorotate dehydrogenase N8E86_06645 PF11940 Domain of unknown function (DUF3458) Ig-like fold N8E86_06645 PF01433 Peptidase family M1 domain N8E86_06645 PF17432 Domain of unknown function (DUF3458_C) ARM repeats N8E86_06650 PF00731 AIR carboxylase N8E86_06695 PF00156 Phosphoribosyl transferase domain N8E86_06700 PF02674 Colicin V production protein N8E86_06705 PF04217 Protein of unknown function, DUF412 N8E86_06710 PF00871 Acetokinase family N8E86_06715 PF07085 DRTGG domain N8E86_06715 PF01515 Phosphate acetyl/butaryl transferase N8E86_06720 PF00924 Mechanosensitive ion channel N8E86_06720 PF05552 Conserved TM helix N8E86_06725 PF03739 Lipopolysaccharide export system permease LptF/LptG N8E86_06730 PF03739 Lipopolysaccharide export system permease LptF/LptG N8E86_06735 PF00883 Cytosol aminopeptidase family, catalytic domain N8E86_06735 PF02789 Cytosol aminopeptidase family, N-terminal domain N8E86_06740 PF12323 Helix-turn-helix domain N8E86_06740 PF01385 Probable transposase N8E86_06740 PF07282 Putative transposase DNA-binding domain N8E86_06745 PF01797 Transposase IS200 like N8E86_06760 PF01488 Shikimate / quinate 5-dehydrogenase N8E86_06760 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain N8E86_06760 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain N8E86_06765 PF16123 Hydroxyacylglutathione hydrolase C-terminus N8E86_06765 PF00753 Metallo-beta-lactamase superfamily N8E86_06770 PF08241 Methyltransferase domain N8E86_06775 PF18381 YcaO cyclodehydratase C-terminal domain N8E86_06775 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding N8E86_06780 PF06295 Protein of unknown function (DUF1043) N8E86_06785 PF00268 Ribonucleotide reductase, small chain N8E86_06800 PF00111 2Fe-2S iron-sulfur cluster binding domain N8E86_06805 PF05173 Dihydrodipicolinate reductase, C-terminus N8E86_06805 PF01113 Dihydrodipicolinate reductase, N-terminus N8E86_06810 PF01810 LysE type translocator N8E86_06815 PF04608 Phosphatidylglycerophosphatase A N8E86_06820 PF00586 AIR synthase related protein, N-terminal domain N8E86_06820 PF02769 AIR synthase related protein, C-terminal domain N8E86_06825 PF01029 NusB family N8E86_06830 PF00885 6,7-dimethyl-8-ribityllumazine synthase N8E86_06835 PF03222 Tryptophan/tyrosine permease family N8E86_06845 PF00300 Histidine phosphatase superfamily (branch 1) N8E86_06850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N8E86_06850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N8E86_06850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N8E86_06850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N8E86_06855 PF00809 Pterin binding enzyme N8E86_06865 PF13180 PDZ domain N8E86_06870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N8E86_06870 PF01872 RibD C-terminal domain N8E86_06875 PF03477 ATP cone domain N8E86_06880 PF09313 Domain of unknown function (DUF1971) N8E86_06880 PF03848 Tellurite resistance protein TehB N8E86_06885 PF07728 AAA domain (dynein-related subfamily) N8E86_06885 PF17868 AAA lid domain N8E86_06885 PF12592 Protein of unknown function (DUF3763) N8E86_06910 PF03129 Anticodon binding domain N8E86_06910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N8E86_06910 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N8E86_06910 PF02824 TGS domain N8E86_06915 PF04399 Glutaredoxin 2, C terminal domain N8E86_06915 PF13417 Glutathione S-transferase, N-terminal domain N8E86_06920 PF03881 Fructosamine kinase N8E86_06930 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) N8E86_06935 PF00271 Helicase conserved C-terminal domain N8E86_06935 PF04851 Type III restriction enzyme, res subunit N8E86_06935 PF02151 UvrB/uvrC motif N8E86_06935 PF12344 Ultra-violet resistance protein B N8E86_06935 PF17757 UvrB interaction domain N8E86_06945 PF01699 Sodium/calcium exchanger protein N8E86_06950 PF03824 High-affinity nickel-transport protein N8E86_06955 PF06226 Protein of unknown function (DUF1007) N8E86_06960 PF12848 ABC transporter N8E86_06960 PF00005 ABC transporter N8E86_06975 PF00356 Bacterial regulatory proteins, lacI family N8E86_06980 PF00294 pfkB family carbohydrate kinase N8E86_06985 PF07670 Nucleoside recognition N8E86_06985 PF01773 Na+ dependent nucleoside transporter N-terminus N8E86_06985 PF07662 Na+ dependent nucleoside transporter C-terminus N8E86_06990 PF01156 Inosine-uridine preferring nucleoside hydrolase N8E86_06995 PF00595 PDZ domain N8E86_07000 PF01027 Inhibitor of apoptosis-promoting Bax1 N8E86_07005 PF04358 DsrC like protein N8E86_07010 PF01297 Zinc-uptake complex component A periplasmic N8E86_07015 PF00005 ABC transporter N8E86_07020 PF00950 ABC 3 transport family N8E86_07025 PF00950 ABC 3 transport family N8E86_07030 PF00561 alpha/beta hydrolase fold N8E86_07035 PF02698 DUF218 domain N8E86_07040 PF00356 Bacterial regulatory proteins, lacI family N8E86_07040 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N8E86_07045 PF00793 DAHP synthetase I family N8E86_07050 PF02687 FtsX-like permease family N8E86_07050 PF12704 MacB-like periplasmic core domain N8E86_07055 PF00005 ABC transporter N8E86_07060 PF02687 FtsX-like permease family N8E86_07060 PF12704 MacB-like periplasmic core domain N8E86_07065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N8E86_07065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N8E86_07070 PF00793 DAHP synthetase I family N8E86_07075 PF13369 Transglutaminase-like superfamily N8E86_07080 PF13847 Methyltransferase domain N8E86_07080 PF17827 PrmC N-terminal domain N8E86_07085 PF00004 ATPase family associated with various cellular activities (AAA) N8E86_07085 PF17862 AAA+ lid domain N8E86_07085 PF06480 FtsH Extracellular N8E86_07085 PF01434 Peptidase family M41 N8E86_07090 PF01728 FtsJ-like methyltransferase N8E86_07095 PF12805 FUSC-like inner membrane protein yccS N8E86_07100 PF02142 MGS-like domain N8E86_07105 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N8E86_07110 PF02391 MoaE protein N8E86_07115 PF02597 ThiS family N8E86_07120 PF01967 MoaC family N8E86_07125 PF06463 Molybdenum Cofactor Synthesis C N8E86_07125 PF04055 Radical SAM superfamily N8E86_07130 PF01933 Uncharacterised protein family UPF0052 N8E86_07140 PF13954 PapC N-terminal domain N8E86_07140 PF13953 PapC C-terminal domain N8E86_07140 PF00577 Outer membrane usher protein N8E86_07145 PF02753 Pili assembly chaperone PapD, C-terminal domain N8E86_07145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain N8E86_07165 PF03062 MBOAT, membrane-bound O-acyltransferase family N8E86_07170 PF01227 GTP cyclohydrolase I N8E86_07175 PF03454 MoeA C-terminal region (domain IV) N8E86_07175 PF00994 Probable molybdopterin binding domain N8E86_07175 PF03453 MoeA N-terminal region (domain I and II) N8E86_07180 PF00899 ThiF family N8E86_07185 PF03956 Lysine exporter LysO N8E86_07190 PF00210 Ferritin-like domain N8E86_07195 PF00210 Ferritin-like domain N8E86_07205 PF00027 Cyclic nucleotide-binding domain N8E86_07205 PF13545 Crp-like helix-turn-helix domain N8E86_07210 PF00582 Universal stress protein family N8E86_07215 PF00691 OmpA family N8E86_07220 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal N8E86_07220 PF00132 Bacterial transferase hexapeptide (six repeats) N8E86_07220 PF14602 Hexapeptide repeat of succinyl-transferase N8E86_07225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E86_07225 PF03466 LysR substrate binding domain N8E86_07230 PF00849 RNA pseudouridylate synthase N8E86_07230 PF01479 S4 domain N8E86_07235 PF01300 Telomere recombination N8E86_07240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N8E86_07245 PF04348 LppC putative lipoprotein N8E86_07250 PF02021 Uncharacterised protein family UPF0102 N8E86_07255 PF13580 SIS domain N8E86_07260 PF04972 BON domain N8E86_07265 PF00580 UvrD/REP helicase N-terminal domain N8E86_07265 PF13361 UvrD-like helicase C-terminal domain N8E86_07280 PF18125 RlmM ferredoxin-like domain N8E86_07280 PF01728 FtsJ-like methyltransferase N8E86_07285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E86_07285 PF03466 LysR substrate binding domain N8E86_07290 PF01063 Amino-transferase class IV N8E86_07295 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin N8E86_07295 PF13018 Extended Signal Peptide of Type V secretion system N8E86_07295 PF05662 Coiled stalk of trimeric autotransporter adhesin N8E86_07295 PF03895 YadA-like membrane anchor domain N8E86_07305 PF03840 Preprotein translocase SecG subunit N8E86_07310 PF01751 Toprim domain N8E86_07310 PF01131 DNA topoisomerase N8E86_07315 PF02575 YbaB/EbfC DNA-binding family N8E86_07320 PF02132 RecR protein N8E86_07320 PF13662 Toprim domain N8E86_07325 PF01053 Cys/Met metabolism PLP-dependent enzyme N8E86_07330 PF10417 C-terminal domain of 1-Cys peroxiredoxin N8E86_07330 PF00578 AhpC/TSA family N8E86_07335 PF05166 YcgL domain N8E86_07340 PF01467 Cytidylyltransferase-like N8E86_07340 PF00294 pfkB family carbohydrate kinase N8E86_07345 PF03279 Bacterial lipid A biosynthesis acyltransferase N8E86_07350 PF00753 Metallo-beta-lactamase superfamily N8E86_07355 PF05951 Bacterial protein of unknown function (DUF882) N8E86_07360 PF03734 L,D-transpeptidase catalytic domain N8E86_07365 PF03572 Peptidase family S41 N8E86_07365 PF17804 Tail specific protease N-terminal domain N8E86_07365 PF11818 C-terminal domain of tail specific protease (DUF3340) N8E86_07365 PF00595 PDZ domain N8E86_07370 PF04352 ProQ/FINO family N8E86_07370 PF17516 ProQ C-terminal domain N8E86_07375 PF04403 Paraquat-inducible protein A N8E86_07380 PF02470 MlaD protein N8E86_07385 PF00204 DNA gyrase B N8E86_07385 PF00986 DNA gyrase B subunit, carboxyl terminus N8E86_07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E86_07385 PF01751 Toprim domain N8E86_07390 PF07732 Multicopper oxidase N8E86_07395 PF00521 DNA gyrase/topoisomerase IV, subunit A N8E86_07395 PF03989 DNA gyrase C-terminal domain, beta-propeller N8E86_07400 PF11230 Protein of unknown function (DUF3029) N8E86_07405 PF04055 Radical SAM superfamily N8E86_07410 PF03783 Curli production assembly/transport component CsgG N8E86_07420 PF05643 Putative bacterial lipoprotein (DUF799) N8E86_07425 PF01131 DNA topoisomerase N8E86_07425 PF01751 Toprim domain N8E86_07425 PF01396 Topoisomerase DNA binding C4 zinc finger N8E86_07425 PF08272 Topoisomerase I zinc-ribbon-like N8E86_07430 PF03466 LysR substrate binding domain N8E86_07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E86_07435 PF01343 Peptidase family S49 N8E86_07440 PF00881 Nitroreductase family N8E86_07445 PF05726 Pirin C-terminal cupin domain N8E86_07445 PF02678 Pirin N8E86_07450 PF05979 Bacterial protein of unknown function (DUF896) N8E86_07455 PF03466 LysR substrate binding domain N8E86_07455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E86_07460 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N8E86_07460 PF00056 lactate/malate dehydrogenase, NAD binding domain N8E86_07465 PF10369 Small subunit of acetolactate synthase N8E86_07470 PF00205 Thiamine pyrophosphate enzyme, central domain N8E86_07470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N8E86_07470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N8E86_07475 PF03553 Na+/H+ antiporter family N8E86_07480 PF00816 H-NS histone family N8E86_07485 PF08206 Ribonuclease B OB domain N8E86_07485 PF00773 RNB domain N8E86_07485 PF00575 S1 RNA binding domain N8E86_07495 PF01784 NIF3 (NGG1p interacting factor 3) N8E86_07500 PF00356 Bacterial regulatory proteins, lacI family N8E86_07505 PF00311 Phosphoenolpyruvate carboxylase N8E86_07510 PF00919 Uncharacterized protein family UPF0004 N8E86_07510 PF01938 TRAM domain N8E86_07510 PF04055 Radical SAM superfamily N8E86_07515 PF01494 FAD binding domain N8E86_07520 PF00149 Calcineurin-like phosphoesterase N8E86_07525 PF00293 NUDIX domain N8E86_07530 PF06146 Phosphate-starvation-inducible E N8E86_07535 PF02557 D-alanyl-D-alanine carboxypeptidase N8E86_07540 PF07687 Peptidase dimerisation domain N8E86_07540 PF01546 Peptidase family M20/M25/M40 N8E86_07545 PF03960 ArsC family N8E86_07550 PF02086 D12 class N6 adenine-specific DNA methyltransferase N8E86_07555 PF05315 ICEA Protein N8E86_07560 PF01555 DNA methylase N8E86_07565 PF00291 Pyridoxal-phosphate dependent enzyme N8E86_07565 PF14821 Threonine synthase N terminus N8E86_07570 PF00288 GHMP kinases N terminal domain N8E86_07570 PF08544 GHMP kinases C terminal N8E86_07575 PF01842 ACT domain N8E86_07575 PF00696 Amino acid kinase family N8E86_07575 PF13840 ACT domain N8E86_07575 PF00742 Homoserine dehydrogenase N8E86_07575 PF03447 Homoserine dehydrogenase, NAD binding domain N8E86_07580 PF01168 Alanine racemase, N-terminal domain N8E86_07585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N8E86_07590 PF00929 Exonuclease N8E86_07595 PF03553 Na+/H+ antiporter family N8E86_07595 PF13726 Na+-H+ antiporter family N8E86_07600 PF18327 Proline utilization A proline dehydrogenase N-terminal domain N8E86_07600 PF14850 DNA-binding domain of Proline dehydrogenase N8E86_07600 PF01619 Proline dehydrogenase N8E86_07600 PF00171 Aldehyde dehydrogenase family N8E86_07605 PF00474 Sodium:solute symporter family N8E86_07610 PF02547 Queuosine biosynthesis protein N8E86_07615 PF01702 Queuine tRNA-ribosyltransferase N8E86_07620 PF01814 Hemerythrin HHE cation binding domain N8E86_07625 PF02699 Preprotein translocase subunit N8E86_07630 PF02355 Protein export membrane protein N8E86_07630 PF13721 SecD export protein N-terminal TM region N8E86_07630 PF07549 SecD/SecF GG Motif N8E86_07635 PF02355 Protein export membrane protein N8E86_07635 PF07549 SecD/SecF GG Motif N8E86_07640 PF14718 Soluble lytic murein transglycosylase L domain N8E86_07640 PF01464 Transglycosylase SLT domain N8E86_07645 PF01371 Trp repressor protein N8E86_07650 PF00912 Transglycosylase N8E86_07655 PF00106 short chain dehydrogenase N8E86_07660 PF12832 MFS_1 like family N8E86_07695 PF05860 haemagglutination activity domain N8E86_07695 PF13332 Hemagglutinin repeat N8E86_07695 PF13018 Extended Signal Peptide of Type V secretion system N8E86_07695 PF04829 Pre-toxin domain with VENN motif N8E86_07715 PF18273 Type III R-M EcoP15I C-terminal domain N8E86_07715 PF01555 DNA methylase N8E86_07725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E86_07725 PF03466 LysR substrate binding domain N8E86_07730 PF00512 His Kinase A (phospho-acceptor) domain N8E86_07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E86_07730 PF08521 Two-component sensor kinase N-terminal N8E86_07735 PF00486 Transcriptional regulatory protein, C terminal N8E86_07735 PF00072 Response regulator receiver domain N8E86_07740 PF03070 TENA/THI-4/PQQC family N8E86_07770 PF02233 NAD(P) transhydrogenase beta subunit N8E86_07775 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N8E86_07775 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N8E86_07775 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch N8E86_07795 PF03749 Sugar fermentation stimulation protein RE domain N8E86_07795 PF17746 SfsA N-terminal OB domain N8E86_07805 PF16347 Domain of unknown function (DUF4976) N8E86_07805 PF00884 Sulfatase N8E86_07815 PF03102 NeuB family N8E86_07815 PF08666 SAF domain N8E86_07820 PF13472 GDSL-like Lipase/Acylhydrolase family N8E86_07820 PF02348 Cytidylyltransferase N8E86_07825 PF02350 UDP-N-acetylglucosamine 2-epimerase N8E86_07830 PF01479 S4 domain N8E86_07830 PF00579 tRNA synthetases class I (W and Y) N8E86_07835 PF00294 pfkB family carbohydrate kinase N8E86_07840 PF08244 Glycosyl hydrolases family 32 C terminal N8E86_07840 PF00251 Glycosyl hydrolases family 32 N-terminal domain N8E86_07855 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE N8E86_07860 PF01520 N-acetylmuramoyl-L-alanine amidase N8E86_07860 PF01476 LysM domain N8E86_07865 PF01119 DNA mismatch repair protein, C-terminal domain N8E86_07865 PF08676 MutL C terminal dimerisation domain N8E86_07875 PF17209 Hfq protein N8E86_07880 PF16360 GTP-binding GTPase Middle Region N8E86_07880 PF01926 50S ribosome-binding GTPase N8E86_07880 PF13167 GTP-binding GTPase N-terminal N8E86_07885 PF00860 Permease family N8E86_07890 PF04269 Protein of unknown function, DUF440 N8E86_07900 PF01926 50S ribosome-binding GTPase N8E86_07935 PF08279 HTH domain N8E86_07935 PF13280 WYL domain N8E86_07945 PF07445 Primosomal replication protein priC N8E86_07950 PF02678 Pirin N8E86_07950 PF17954 Quercetinase C-terminal cupin domain N8E86_07955 PF13406 Transglycosylase SLT domain N8E86_07960 PF00535 Glycosyl transferase family 2 N8E86_07965 PF00535 Glycosyl transferase family 2 N8E86_07975 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) N8E86_07985 PF04230 Polysaccharide pyruvyl transferase N8E86_07990 PF02698 DUF218 domain N8E86_07995 PF02801 Beta-ketoacyl synthase, C-terminal domain N8E86_07995 PF00109 Beta-ketoacyl synthase, N-terminal domain N8E86_08000 PF05430 S-adenosyl-L-methionine-dependent methyltransferase N8E86_08000 PF01266 FAD dependent oxidoreductase N8E86_08005 PF09334 tRNA synthetases class I (M) N8E86_08005 PF01588 Putative tRNA binding domain N8E86_08015 PF10609 NUBPL iron-transfer P-loop NTPase N8E86_08020 PF03239 Iron permease FTR1 family N8E86_08025 PF10634 Fe2+ transport protein N8E86_08035 PF00005 ABC transporter N8E86_08035 PF02687 FtsX-like permease family N8E86_08035 PF12704 MacB-like periplasmic core domain N8E86_08045 PF00005 ABC transporter N8E86_08050 PF01263 Aldose 1-epimerase N8E86_08060 PF00152 tRNA synthetases class II (D, K and N) N8E86_08060 PF01336 OB-fold nucleic acid binding domain N8E86_08070 PF10411 Disulfide bond isomerase protein N-terminus N8E86_08070 PF13098 Thioredoxin-like domain N8E86_08075 PF01368 DHH family N8E86_08075 PF02272 DHHA1 domain N8E86_08075 PF17768 RecJ OB domain N8E86_08080 PF01048 Phosphorylase superfamily N8E86_08085 PF00691 OmpA family N8E86_08085 PF01389 OmpA-like transmembrane domain N8E86_08095 PF03831 PhnA domain N8E86_08095 PF08274 PhnA Zinc-Ribbon N8E86_08100 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) N8E86_08105 PF00005 ABC transporter N8E86_08115 PF01032 FecCD transport family N8E86_08120 PF10670 Domain of unknown function (DUF4198) N8E86_08125 PF00593 TonB dependent receptor N8E86_08125 PF07715 TonB-dependent Receptor Plug Domain N8E86_08130 PF07715 TonB-dependent Receptor Plug Domain N8E86_08130 PF00593 TonB dependent receptor N8E86_08135 PF03313 Serine dehydratase alpha chain N8E86_08145 PF08348 YheO-like PAS domain N8E86_08145 PF13309 HTH domain N8E86_08155 PF02887 Pyruvate kinase, alpha/beta domain N8E86_08155 PF00224 Pyruvate kinase, barrel domain N8E86_08160 PF00881 Nitroreductase family N8E86_08165 PF08543 Phosphomethylpyrimidine kinase N8E86_08170 PF01171 PP-loop family N8E86_08170 PF09179 TilS substrate binding domain N8E86_08170 PF11734 TilS substrate C-terminal domain N8E86_08175 PF02629 CoA binding domain N8E86_08175 PF00549 CoA-ligase N8E86_08180 PF08442 ATP-grasp domain N8E86_08180 PF00549 CoA-ligase N8E86_08185 PF02817 e3 binding domain N8E86_08185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N8E86_08185 PF00364 Biotin-requiring enzyme N8E86_08190 PF16078 2-oxoglutarate dehydrogenase N-terminus N8E86_08190 PF00676 Dehydrogenase E1 component N8E86_08190 PF16870 2-oxoglutarate dehydrogenase C-terminal N8E86_08190 PF02779 Transketolase, pyrimidine binding domain N8E86_08195 PF00285 Citrate synthase, C-terminal domain N8E86_08205 PF02525 Flavodoxin-like fold N8E86_08215 PF01145 SPFH domain / Band 7 family N8E86_08215 PF16200 C-terminal region of band_7 N8E86_08245 PF00480 ROK family N8E86_08245 PF01047 MarR family N8E86_08250 PF01025 GrpE N8E86_08255 PF01513 ATP-NAD kinase N8E86_08260 PF02463 RecF/RecN/SMC N terminal domain N8E86_08265 PF01250 Ribosomal protein S6 N8E86_08270 PF00436 Single-strand binding protein family N8E86_08275 PF01084 Ribosomal protein S18 N8E86_08280 PF01281 Ribosomal protein L9, N-terminal domain N8E86_08280 PF03948 Ribosomal protein L9, C-terminal domain N8E86_08285 PF12762 ISXO2-like transposase domain N8E86_08290 PF00202 Aminotransferase class-III N8E86_08295 PF01523 Putative modulator of DNA gyrase N8E86_08300 PF10150 Ribonuclease E/G family N8E86_08300 PF00575 S1 RNA binding domain N8E86_08305 PF08003 Protein of unknown function (DUF1698) N8E86_08355 PF00953 Glycosyl transferase family 4 N8E86_08360 PF00202 Aminotransferase class-III N8E86_08365 PF08335 GlnD PII-uridylyltransferase N8E86_08365 PF01966 HD domain N8E86_08370 PF00557 Metallopeptidase family M24 N8E86_08375 PF01521 Iron-sulphur cluster biosynthesis N8E86_08380 PF06062 Uncharacterised protein family (UPF0231) N8E86_08385 PF00912 Transglycosylase N8E86_08385 PF00905 Penicillin binding protein transpeptidase domain N8E86_08385 PF14814 Bifunctional transglycosylase second domain N8E86_08395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N8E86_08400 PF04304 Protein of unknown function (DUF454) N8E86_08405 PF01432 Peptidase family M3 N8E86_08410 PF00152 tRNA synthetases class II (D, K and N) N8E86_08415 PF02910 Fumarate reductase flavoprotein C-term N8E86_08415 PF00890 FAD binding domain N8E86_08420 PF13183 4Fe-4S dicluster domain N8E86_08420 PF13085 2Fe-2S iron-sulfur cluster binding domain N8E86_08425 PF02300 Fumarate reductase subunit C N8E86_08430 PF02313 Fumarate reductase subunit D N8E86_08450 PF10672 S-adenosylmethionine-dependent methyltransferase N8E86_08450 PF02926 THUMP domain N8E86_08450 PF01170 Putative RNA methylase family UPF0020 N8E86_08455 PF01297 Zinc-uptake complex component A periplasmic N8E86_08460 PF00899 ThiF family N8E86_08465 PF03562 MltA specific insert domain N8E86_08465 PF06725 3D domain N8E86_08475 PF00313 'Cold-shock' DNA-binding domain N8E86_08480 PF08245 Mur ligase middle domain N8E86_08480 PF02875 Mur ligase family, glutamate ligase domain N8E86_08480 PF01225 Mur ligase family, catalytic domain N8E86_08485 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain N8E86_08490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N8E86_08495 PF01722 BolA-like protein N8E86_08500 PF13466 STAS domain N8E86_08505 PF05494 MlaC protein N8E86_08510 PF02470 MlaD protein N8E86_08515 PF02405 Permease MlaE N8E86_08520 PF00005 ABC transporter N8E86_08530 PF06835 Lipopolysaccharide-assembly, LptC-related N8E86_08535 PF03968 OstA-like protein N8E86_08540 PF12399 Branched-chain amino acid ATP-binding cassette transporter N8E86_08540 PF00005 ABC transporter N8E86_08545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N8E86_08550 PF03668 P-loop ATPase protein family N8E86_08555 PF03786 D-mannonate dehydratase (UxuA) N8E86_08560 PF07729 FCD domain N8E86_08560 PF00392 Bacterial regulatory proteins, gntR family N8E86_08565 PF16338 Domain of unknown function (DUF4968) N8E86_08565 PF17137 Domain of unknown function (DUF5110) N8E86_08565 PF01055 Glycosyl hydrolases family 31 N8E86_08565 PF13802 Galactose mutarotase-like N8E86_08570 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N8E86_08575 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N8E86_08585 PF03480 Bacterial extracellular solute-binding protein, family 7 N8E86_08590 PF00106 short chain dehydrogenase N8E86_08595 PF02614 Glucuronate isomerase N8E86_08605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N8E86_08610 PF00155 Aminotransferase class I and II N8E86_08615 PF00266 Aminotransferase class-V N8E86_08620 PF04363 Protein of unknown function (DUF496) N8E86_08625 PF12762 ISXO2-like transposase domain N8E86_08630 PF06628 Catalase-related immune-responsive N8E86_08630 PF00199 Catalase N8E86_08635 PF00687 Ribosomal protein L1p/L10e family N8E86_08640 PF03946 Ribosomal protein L11, N-terminal domain N8E86_08640 PF00298 Ribosomal protein L11, RNA binding domain N8E86_08655 PF00710 Asparaginase, N-terminal N8E86_08655 PF17763 Glutaminase/Asparaginase C-terminal domain N8E86_08660 PF12762 ISXO2-like transposase domain N8E86_08665 PF03895 YadA-like membrane anchor domain N8E86_08665 PF05662 Coiled stalk of trimeric autotransporter adhesin N8E86_08665 PF13018 Extended Signal Peptide of Type V secretion system N8E86_08665 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin N8E86_08670 PF02378 Phosphotransferase system, EIIC N8E86_08670 PF00367 phosphotransferase system, EIIB N8E86_08675 PF05191 Adenylate kinase, active site lid N8E86_08680 PF00561 alpha/beta hydrolase fold N8E86_08685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N8E86_08685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N8E86_08685 PF16582 Middle domain of thiamine pyrophosphate N8E86_08690 PF00425 chorismate binding enzyme N8E86_08695 PF00155 Aminotransferase class I and II N8E86_08700 PF07840 FadR C-terminal domain N8E86_08700 PF00392 Bacterial regulatory proteins, gntR family N8E86_08705 PF06450 Bacterial Na+/H+ antiporter B (NhaB) N8E86_08710 PF02600 Disulfide bond formation protein DsbB N8E86_08715 PF03741 Integral membrane protein TerC family N8E86_08720 PF02976 DNA mismatch repair enzyme MutH N8E86_08725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N8E86_08725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N8E86_08730 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N8E86_08740 PF03458 UPF0126 domain N8E86_08745 PF00171 Aldehyde dehydrogenase family N8E86_08750 PF00696 Amino acid kinase family N8E86_08750 PF01842 ACT domain N8E86_08755 PF00581 Rhodanese-like domain N8E86_08760 PF04143 Sulphur transport N8E86_08765 PF00709 Adenylosuccinate synthetase N8E86_08780 PF01791 DeoC/LacD family aldolase N8E86_08785 PF01979 Amidohydrolase family N8E86_08790 PF00455 DeoR C terminal sensor domain N8E86_08790 PF08220 DeoR-like helix-turn-helix domain N8E86_08800 PF00884 Sulfatase N8E86_08805 PF04055 Radical SAM superfamily N8E86_08805 PF13186 Iron-sulfur cluster-binding domain N8E86_08815 PF07470 Glycosyl Hydrolase Family 88 N8E86_08820 PF03830 PTS system sorbose subfamily IIB component N8E86_08820 PF03610 PTS system fructose IIA component N8E86_08825 PF03613 PTS system mannose/fructose/sorbose family IID component N8E86_08830 PF03609 PTS system sorbose-specific iic component N8E86_08835 PF03830 PTS system sorbose subfamily IIB component N8E86_08840 PF01380 SIS domain N8E86_08845 PF08013 Tagatose 6 phosphate kinase N8E86_08850 PF00884 Sulfatase N8E86_08865 PF01614 Bacterial transcriptional regulator N8E86_08865 PF09339 IclR helix-turn-helix domain N8E86_08870 PF00294 pfkB family carbohydrate kinase N8E86_08875 PF01081 KDPG and KHG aldolase N8E86_08880 PF03009 Glycerophosphoryl diester phosphodiesterase family N8E86_08885 PF08402 TOBE domain N8E86_08885 PF00005 ABC transporter N8E86_08890 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_08895 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_08905 PF00328 Histidine phosphatase superfamily (branch 2) N8E86_08915 PF04221 RelB antitoxin N8E86_08920 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N8E86_08925 PF01132 Elongation factor P (EF-P) OB domain N8E86_08925 PF09285 Elongation factor P, C-terminal N8E86_08925 PF08207 Elongation factor P (EF-P) KOW-like domain N8E86_08930 PF04055 Radical SAM superfamily N8E86_08935 PF04225 Opacity-associated protein A LysM-like domain N8E86_08935 PF08525 Opacity-associated protein A N-terminal motif N8E86_08945 PF04381 Putative exonuclease, RdgC N8E86_08950 PF03807 NADP oxidoreductase coenzyme F420-dependent N8E86_08950 PF14748 Pyrroline-5-carboxylate reductase dimerisation N8E86_08955 PF12832 MFS_1 like family N8E86_08960 PF02899 Phage integrase, N-terminal SAM-like domain N8E86_08960 PF00589 Phage integrase family N8E86_08965 PF01817 Chorismate mutase type II N8E86_08965 PF00800 Prephenate dehydratase N8E86_08970 PF14765 Polyketide synthase dehydratase N8E86_08970 PF08659 KR domain N8E86_08970 PF08240 Alcohol dehydrogenase GroES-like domain N8E86_08970 PF00107 Zinc-binding dehydrogenase N8E86_08970 PF16197 Ketoacyl-synthetase C-terminal extension N8E86_08970 PF00109 Beta-ketoacyl synthase, N-terminal domain N8E86_08970 PF02801 Beta-ketoacyl synthase, C-terminal domain N8E86_08970 PF00550 Phosphopantetheine attachment site N8E86_08970 PF00698 Acyl transferase domain N8E86_08975 PF00106 short chain dehydrogenase N8E86_08980 PF01965 DJ-1/PfpI family N8E86_08990 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase N8E86_08995 PF00091 Tubulin/FtsZ family, GTPase domain N8E86_08995 PF12327 FtsZ family, C-terminal domain N8E86_09000 PF02491 SHS2 domain inserted in FTSA N8E86_09005 PF03799 Cell division protein FtsQ N8E86_09005 PF08478 POTRA domain, FtsQ-type N8E86_09010 PF07478 D-ala D-ala ligase C-terminus N8E86_09010 PF01820 D-ala D-ala ligase N-terminus N8E86_09015 PF01225 Mur ligase family, catalytic domain N8E86_09015 PF02875 Mur ligase family, glutamate ligase domain N8E86_09015 PF08245 Mur ligase middle domain N8E86_09020 PF04101 Glycosyltransferase family 28 C-terminal domain N8E86_09020 PF03033 Glycosyltransferase family 28 N-terminal domain N8E86_09025 PF01098 Cell cycle protein N8E86_09030 PF02875 Mur ligase family, glutamate ligase domain N8E86_09030 PF08245 Mur ligase middle domain N8E86_09035 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 N8E86_09035 PF00953 Glycosyl transferase family 4 N8E86_09040 PF01225 Mur ligase family, catalytic domain N8E86_09040 PF08245 Mur ligase middle domain N8E86_09040 PF02875 Mur ligase family, glutamate ligase domain N8E86_09045 PF08245 Mur ligase middle domain N8E86_09045 PF02875 Mur ligase family, glutamate ligase domain N8E86_09045 PF01225 Mur ligase family, catalytic domain N8E86_09050 PF00905 Penicillin binding protein transpeptidase domain N8E86_09050 PF03717 Penicillin-binding Protein dimerisation domain N8E86_09055 PF04999 Cell division protein FtsL N8E86_09060 PF01795 MraW methylase family N8E86_09065 PF02381 MraZ protein, putative antitoxin-like N8E86_09075 PF17176 tRNA-binding domain N8E86_09075 PF05127 Helicase N8E86_09075 PF13718 GNAT acetyltransferase 2 N8E86_09080 PF02130 Uncharacterized protein family UPF0054 N8E86_09085 PF02562 PhoH-like protein N8E86_09090 PF00149 Calcineurin-like phosphoesterase N8E86_09095 PF01553 Acyltransferase N8E86_09100 PF07732 Multicopper oxidase N8E86_09105 PF13230 Glutamine amidotransferases class-II N8E86_09110 PF03222 Tryptophan/tyrosine permease family N8E86_09115 PF03315 Serine dehydratase beta chain N8E86_09115 PF03313 Serine dehydratase alpha chain N8E86_09120 PF01578 Cytochrome C assembly protein N8E86_09120 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal N8E86_09125 PF08534 Redoxin N8E86_09130 PF03918 Cytochrome C biogenesis protein N8E86_09135 PF03918 Cytochrome C biogenesis protein N8E86_09145 PF01336 OB-fold nucleic acid binding domain N8E86_09145 PF14579 Helix-hairpin-helix motif N8E86_09145 PF07733 Bacterial DNA polymerase III alpha NTPase domain N8E86_09145 PF02811 PHP domain N8E86_09145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N8E86_09150 PF03916 Polysulphide reductase, NrfD N8E86_09155 PF13247 4Fe-4S dicluster domain N8E86_09165 PF02335 Cytochrome c552 N8E86_09170 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family N8E86_09170 PF04055 Radical SAM superfamily N8E86_09175 PF03099 Biotin/lipoate A/B protein ligase family N8E86_09180 PF04359 Protein of unknown function (DUF493) N8E86_09185 PF00768 D-alanyl-D-alanine carboxypeptidase N8E86_09185 PF07943 Penicillin-binding protein 5, C-terminal domain N8E86_09190 PF05036 Sporulation related domain N8E86_09190 PF03330 Lytic transglycolase N8E86_09195 PF01098 Cell cycle protein N8E86_09200 PF00905 Penicillin binding protein transpeptidase domain N8E86_09200 PF03717 Penicillin-binding Protein dimerisation domain N8E86_09205 PF02590 Predicted SPOUT methyltransferase N8E86_09215 PF00271 Helicase conserved C-terminal domain N8E86_09215 PF00270 DEAD/DEAH box helicase N8E86_09220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N8E86_09220 PF07498 Rho termination factor, N-terminal domain N8E86_09220 PF07497 Rho termination factor, RNA-binding domain N8E86_09225 PF07690 Major Facilitator Superfamily N8E86_09235 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) N8E86_09240 PF00485 Phosphoribulokinase / Uridine kinase family N8E86_09245 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_09250 PF00005 ABC transporter N8E86_09250 PF08402 TOBE domain N8E86_09280 PF01177 Asp/Glu/Hydantoin racemase N8E86_09285 PF00270 DEAD/DEAH box helicase N8E86_09285 PF00271 Helicase conserved C-terminal domain N8E86_09285 PF17191 RecG wedge domain N8E86_09290 PF13291 ACT domain N8E86_09290 PF04607 Region found in RelA / SpoT proteins N8E86_09290 PF02824 TGS domain N8E86_09295 PF01192 RNA polymerase Rpb6 N8E86_09300 PF00625 Guanylate kinase N8E86_09305 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N8E86_09305 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N8E86_09310 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N8E86_09310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N8E86_09315 PF02666 Phosphatidylserine decarboxylase N8E86_09325 PF00202 Aminotransferase class-III N8E86_09330 PF00155 Aminotransferase class I and II N8E86_09335 PF04301 Protein of unknown function (DUF452) N8E86_09340 PF08241 Methyltransferase domain N8E86_09350 PF02620 Large ribosomal RNA subunit accumulation protein YceD N8E86_09355 PF01783 Ribosomal L32p protein family N8E86_09360 PF02504 Fatty acid synthesis protein N8E86_09365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N8E86_09365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N8E86_09370 PF00698 Acyl transferase domain N8E86_09380 PF00550 Phosphopantetheine attachment site N8E86_09385 PF03605 Anaerobic c4-dicarboxylate membrane transporter N8E86_09390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E86_09390 PF03466 LysR substrate binding domain N8E86_09395 PF00248 Aldo/keto reductase family N8E86_09405 PF13333 Integrase core domain N8E86_09405 PF00665 Integrase core domain N8E86_09405 PF13276 HTH-like domain N8E86_09410 PF13333 Integrase core domain N8E86_09410 PF00665 Integrase core domain N8E86_09430 PF00436 Single-strand binding protein family N8E86_09435 PF17760 UvrA interaction domain N8E86_09435 PF17755 UvrA DNA-binding domain N8E86_09445 PF04085 rod shape-determining protein MreC N8E86_09450 PF04093 rod shape-determining protein MreD N8E86_09455 PF01243 Pyridoxamine 5'-phosphate oxidase N8E86_09460 PF06228 Haem utilisation ChuX/HutX N8E86_09465 PF00593 TonB dependent receptor N8E86_09465 PF07715 TonB-dependent Receptor Plug Domain N8E86_09470 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB N8E86_09470 PF08479 POTRA domain, ShlB-type N8E86_09475 PF05860 haemagglutination activity domain N8E86_09480 PF09190 DALR domain N8E86_09480 PF01406 tRNA synthetases class I (C) catalytic domain N8E86_09485 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N8E86_09490 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N8E86_09490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N8E86_09495 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase N8E86_09500 PF00480 ROK family N8E86_09505 PF04074 YhcH/YjgK/YiaL N8E86_09510 PF01380 SIS domain N8E86_09510 PF01418 Helix-turn-helix domain, rpiR family N8E86_09515 PF00701 Dihydrodipicolinate synthetase family N8E86_09520 PF06827 Zinc finger found in FPG and IleRS N8E86_09520 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain N8E86_09520 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain N8E86_09525 PF00471 Ribosomal protein L33 N8E86_09530 PF00830 Ribosomal L28 family N8E86_09535 PF04002 RadC-like JAB domain N8E86_09540 PF02441 Flavoprotein N8E86_09540 PF04127 DNA / pantothenate metabolism flavoprotein N8E86_09545 PF00692 dUTPase N8E86_09550 PF00440 Bacterial regulatory proteins, tetR family N8E86_09555 PF06794 Uncharacterised protein family (UPF0270) N8E86_09560 PF00027 Cyclic nucleotide-binding domain N8E86_09560 PF13545 Crp-like helix-turn-helix domain N8E86_09565 PF02653 Branched-chain amino acid transport system / permease component N8E86_09570 PF00005 ABC transporter N8E86_09575 PF13407 Periplasmic binding protein domain N8E86_09580 PF13407 Periplasmic binding protein domain N8E86_09585 PF01494 FAD binding domain N8E86_09590 PF01494 FAD binding domain N8E86_09595 PF05195 Aminopeptidase P, N-terminal domain N8E86_09595 PF00557 Metallopeptidase family M24 N8E86_09600 PF03695 Uncharacterised protein family (UPF0149) N8E86_09605 PF05164 Cell division protein ZapA N8E86_09615 PF01812 5-formyltetrahydrofolate cyclo-ligase family N8E86_09620 PF02899 Phage integrase, N-terminal SAM-like domain N8E86_09620 PF00589 Phage integrase family N8E86_09625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N8E86_09625 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N8E86_09630 PF00230 Major intrinsic protein N8E86_09635 PF01980 tRNA-methyltransferase O N8E86_09635 PF18389 TrmO C-terminal domain N8E86_09640 PF01040 UbiA prenyltransferase family N8E86_09645 PF03737 Aldolase/RraA N8E86_09650 PF00939 Sodium:sulfate symporter transmembrane region N8E86_09655 PF01209 ubiE/COQ5 methyltransferase family N8E86_09660 PF02036 SCP-2 sterol transfer family N8E86_09665 PF03109 ABC1 family N8E86_09670 PF02416 mttA/Hcf106 family N8E86_09680 PF00902 Sec-independent protein translocase protein (TatC) N8E86_09685 PF00490 Delta-aminolevulinic acid dehydratase N8E86_09690 PF01026 TatD related DNase N8E86_09700 PF03477 ATP cone domain N8E86_09700 PF13597 Anaerobic ribonucleoside-triphosphate reductase N8E86_09705 PF12826 Helix-hairpin-helix motif N8E86_09705 PF03119 NAD-dependent DNA ligase C4 zinc finger domain N8E86_09705 PF03120 NAD-dependent DNA ligase OB-fold domain N8E86_09705 PF01653 NAD-dependent DNA ligase adenylation domain N8E86_09705 PF00533 BRCA1 C Terminus (BRCT) domain N8E86_09710 PF04354 ZipA, C-terminal FtsZ-binding domain N8E86_09720 PF00291 Pyridoxal-phosphate dependent enzyme N8E86_09725 PF00118 TCP-1/cpn60 chaperonin family N8E86_09730 PF00166 Chaperonin 10 Kd subunit N8E86_09740 PF01464 Transglycosylase SLT domain N8E86_09740 PF00497 Bacterial extracellular solute-binding proteins, family 3 N8E86_09745 PF13580 SIS domain N8E86_09755 PF02559 CarD-like/TRCF domain N8E86_09755 PF17757 UvrB interaction domain N8E86_09755 PF00270 DEAD/DEAH box helicase N8E86_09755 PF03461 TRCF domain N8E86_09755 PF00271 Helicase conserved C-terminal domain N8E86_09760 PF00293 NUDIX domain N8E86_09765 PF07516 SecA Wing and Scaffold domain N8E86_09765 PF01043 SecA preprotein cross-linking domain N8E86_09765 PF07517 SecA DEAD-like domain N8E86_09765 PF02810 SEC-C motif N8E86_09770 PF10818 Protein of unknown function (DUF2547) N8E86_09775 PF05258 Dna[CI] antecedent, DciA N8E86_09780 PF02086 D12 class N6 adenine-specific DNA methyltransferase N8E86_09785 PF01761 3-dehydroquinate synthase N8E86_09790 PF01202 Shikimate kinase N8E86_09795 PF03958 Bacterial type II/III secretion system short domain N8E86_09795 PF00263 Bacterial type II and III secretion system protein N8E86_09815 PF11104 Type IV pilus assembly protein PilM; N8E86_09820 PF00905 Penicillin binding protein transpeptidase domain N8E86_09820 PF17092 Penicillin-binding protein OB-like domain N8E86_09820 PF00912 Transglycosylase N8E86_09825 PF06002 Alpha-2,3-sialyltransferase (CST-I) N8E86_09830 PF02092 Glycyl-tRNA synthetase beta subunit N8E86_09830 PF05746 DALR anticodon binding domain N8E86_09845 PF06250 YhcG PDDEXK nuclease domain N8E86_09845 PF17761 DUF1016 N-terminal domain N8E86_09855 PF02091 Glycyl-tRNA synthetase alpha subunit N8E86_09875 PF00749 tRNA synthetases class I (E and Q), catalytic domain N8E86_09885 PF00589 Phage integrase family N8E86_09910 PF10548 P22AR C-terminal domain N8E86_09910 PF02498 BRO family, N-terminal domain N8E86_09970 PF00436 Single-strand binding protein family N8E86_10075 PF12762 ISXO2-like transposase domain N8E86_10085 PF03796 DnaB-like helicase C terminal domain N8E86_10085 PF00772 DnaB-like helicase N terminal domain N8E86_10095 PF05772 NinB protein N8E86_10135 PF01048 Phosphorylase superfamily N8E86_10165 PF00665 Integrase core domain N8E86_10195 PF01063 Amino-transferase class IV N8E86_10200 PF00425 chorismate binding enzyme N8E86_10205 PF00117 Glutamine amidotransferase class-I N8E86_10210 PF00210 Ferritin-like domain N8E86_10220 PF10396 GTP-binding protein TrmE N-terminus N8E86_10220 PF12631 MnmE helical domain N8E86_10220 PF01926 50S ribosome-binding GTPase N8E86_10240 PF06574 FAD synthetase N8E86_10240 PF01687 Riboflavin kinase N8E86_10245 PF08264 Anticodon-binding domain of tRNA N8E86_10245 PF00133 tRNA synthetases class I (I, L, M and V) N8E86_10250 PF01252 Signal peptidase (SPase) II N8E86_10255 PF02401 LytB protein N8E86_10265 PF00486 Transcriptional regulatory protein, C terminal N8E86_10265 PF00072 Response regulator receiver domain N8E86_10270 PF00512 His Kinase A (phospho-acceptor) domain N8E86_10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E86_10270 PF08521 Two-component sensor kinase N-terminal N8E86_10280 PF00206 Lyase N8E86_10280 PF14698 Argininosuccinate lyase C-terminal N8E86_10285 PF00696 Amino acid kinase family N8E86_10290 PF02774 Semialdehyde dehydrogenase, dimerisation domain N8E86_10290 PF01118 Semialdehyde dehydrogenase, NAD binding domain N8E86_10295 PF01546 Peptidase family M20/M25/M40 N8E86_10295 PF07687 Peptidase dimerisation domain N8E86_10370 PF12833 Helix-turn-helix domain N8E86_10380 PF07690 Major Facilitator Superfamily N8E86_10385 PF02909 Tetracyclin repressor-like, C-terminal domain N8E86_10385 PF00440 Bacterial regulatory proteins, tetR family N8E86_10405 PF03616 Sodium/glutamate symporter N8E86_10415 PF01131 DNA topoisomerase N8E86_10415 PF01751 Toprim domain N8E86_10620 PF08401 Domain of unknown function (DUF1738) N8E86_10620 PF18818 Metallopeptidase superfamily domain N8E86_10620 PF13362 Toprim domain N8E86_10635 PF08681 Protein of unknown function (DUF1778) N8E86_10645 PF00239 Resolvase, N terminal domain N8E86_10645 PF02796 Helix-turn-helix domain of resolvase N8E86_10655 PF01734 Patatin-like phospholipase N8E86_10710 PF01544 CorA-like Mg2+ transporter protein N8E86_10715 PF02325 YGGT family N8E86_10720 PF02594 Uncharacterised ACR, YggU family COG1872 N8E86_10725 PF18075 FtsX extracellular domain N8E86_10730 PF00005 ABC transporter N8E86_10735 PF02779 Transketolase, pyrimidine binding domain N8E86_10735 PF00456 Transketolase, thiamine diphosphate binding domain N8E86_10735 PF02780 Transketolase, C-terminal domain N8E86_10740 PF00596 Class II Aldolase and Adducin N-terminal domain N8E86_10745 PF01261 Xylose isomerase-like TIM barrel N8E86_10750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N8E86_10750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N8E86_10755 PF03480 Bacterial extracellular solute-binding protein, family 7 N8E86_10760 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N8E86_10765 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N8E86_10770 PF04074 YhcH/YjgK/YiaL N8E86_10775 PF02615 Malate/L-lactate dehydrogenase N8E86_10780 PF09339 IclR helix-turn-helix domain N8E86_10780 PF01614 Bacterial transcriptional regulator N8E86_10785 PF02810 SEC-C motif N8E86_10790 PF03631 Virulence factor BrkB N8E86_10795 PF02580 D-Tyr-tRNA(Tyr) deacylase N8E86_10800 PF00072 Response regulator receiver domain N8E86_10800 PF00196 Bacterial regulatory proteins, luxR family N8E86_10805 PF01295 Adenylate cyclase, class-I N8E86_10805 PF12633 Adenylate cyclase NT domain N8E86_10810 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain N8E86_10810 PF03900 Porphobilinogen deaminase, C-terminal domain N8E86_10815 PF02602 Uroporphyrinogen-III synthase HemD N8E86_10820 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase N8E86_10825 PF07219 HemY protein N-terminus N8E86_10835 PF00202 Aminotransferase class-III N8E86_10840 PF00282 Pyridoxal-dependent decarboxylase conserved domain N8E86_10845 PF01078 Magnesium chelatase, subunit ChlI N8E86_10845 PF13335 Magnesium chelatase, subunit ChlI C-terminal N8E86_10850 PF02390 Putative methyltransferase N8E86_10855 PF04320 Protein with unknown function (DUF469) N8E86_10860 PF03841 L-seryl-tRNA selenium transferase N8E86_10860 PF12390 Selenocysteine synthase N terminal N8E86_10865 PF00009 Elongation factor Tu GTP binding domain N8E86_10865 PF03144 Elongation factor Tu domain 2 N8E86_10865 PF09106 Elongation factor SelB, winged helix N8E86_10865 PF09107 Elongation factor SelB, winged helix N8E86_10870 PF00849 RNA pseudouridylate synthase N8E86_10870 PF01479 S4 domain N8E86_10875 PF12111 Polyribonucleotide phosphorylase C terminal N8E86_10875 PF10150 Ribonuclease E/G family N8E86_10875 PF00575 S1 RNA binding domain N8E86_10885 PF01678 Diaminopimelate epimerase N8E86_10890 PF02861 Clp amino terminal domain, pathogenicity island component N8E86_10890 PF10431 C-terminal, D2-small domain, of ClpB protein N8E86_10890 PF00004 ATPase family associated with various cellular activities (AAA) N8E86_10890 PF07724 AAA domain (Cdc48 subfamily) N8E86_10890 PF17871 AAA lid domain N8E86_10895 PF00378 Enoyl-CoA hydratase/isomerase N8E86_10915 PF13378 Enolase C-terminal domain-like N8E86_10920 PF01220 Dehydroquinase class II N8E86_10925 PF00364 Biotin-requiring enzyme N8E86_10930 PF02785 Biotin carboxylase C-terminal domain N8E86_10930 PF00289 Biotin carboxylase, N-terminal domain N8E86_10930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N8E86_10935 PF06196 Protein of unknown function (DUF997) N8E86_10940 PF00474 Sodium:solute symporter family N8E86_10950 PF01207 Dihydrouridine synthase (Dus) N8E86_10955 PF02954 Bacterial regulatory protein, Fis family N8E86_10960 PF00180 Isocitrate/isopropylmalate dehydrogenase N8E86_10965 PF00849 RNA pseudouridylate synthase N8E86_10970 PF00293 NUDIX domain N8E86_10975 PF07274 Protein of unknown function (DUF1440) N8E86_10980 PF00923 Transaldolase/Fructose-6-phosphate aldolase N8E86_10985 PF03352 Methyladenine glycosylase N8E86_10990 PF03968 OstA-like protein N8E86_10990 PF04453 LPS transport system D N8E86_10995 PF03498 Cytolethal distending toxin A/C domain N8E86_11000 PF03372 Endonuclease/Exonuclease/phosphatase family N8E86_11005 PF03498 Cytolethal distending toxin A/C domain N8E86_11010 PF01037 Lrp/AsnC ligand binding domain N8E86_11010 PF13404 AsnC-type helix-turn-helix domain N8E86_11015 PF03590 Aspartate-ammonia ligase N8E86_11035 PF11008 Protein of unknown function (DUF2846) N8E86_11045 PF00005 ABC transporter N8E86_11050 PF00528 Binding-protein-dependent transport system inner membrane component N8E86_11055 PF00497 Bacterial extracellular solute-binding proteins, family 3 N8E86_11060 PF06969 HemN C-terminal domain N8E86_11060 PF04055 Radical SAM superfamily N8E86_11065 PF10675 Protein of unknown function (DUF2489) N8E86_11070 PF04220 Der GTPase activator (YihI) N8E86_11075 PF00849 RNA pseudouridylate synthase N8E86_11080 PF12137 RNA polymerase recycling family C-terminal N8E86_11080 PF00271 Helicase conserved C-terminal domain N8E86_11080 PF18339 RapA N-terminal Tudor like domain 1 N8E86_11080 PF18337 RapA N-terminal Tudor like domain N8E86_11080 PF00176 SNF2 family N-terminal domain N8E86_11085 PF04973 Nicotinamide mononucleotide transporter N8E86_11090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N8E86_11090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N8E86_11095 PF00171 Aldehyde dehydrogenase family N8E86_11100 PF04962 KduI/IolB family N8E86_11105 PF00480 ROK family N8E86_11110 PF00121 Triosephosphate isomerase N8E86_11130 PF02278 Polysaccharide lyase family 8, super-sandwich domain N8E86_11130 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain N8E86_11130 PF09093 Lyase, catalytic N8E86_11130 PF09092 Lyase, N terminal N8E86_11140 PF07690 Major Facilitator Superfamily N8E86_11145 PF00596 Class II Aldolase and Adducin N-terminal domain N8E86_11150 PF05025 RbsD / FucU transport protein family N8E86_11155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N8E86_11155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N8E86_11160 PF07881 L-fucose isomerase, first N-terminal domain N8E86_11160 PF07882 L-fucose isomerase, second N-terminal domain N8E86_11160 PF02952 L-fucose isomerase, C-terminal domain N8E86_11165 PF00455 DeoR C terminal sensor domain N8E86_11165 PF08220 DeoR-like helix-turn-helix domain N8E86_11170 PF01791 DeoC/LacD family aldolase N8E86_11175 PF01370 NAD dependent epimerase/dehydratase family N8E86_11180 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N8E86_11185 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N8E86_11190 PF13580 SIS domain N8E86_11195 PF00265 Thymidine kinase N8E86_11205 PF00814 Glycoprotease family N8E86_11210 PF01165 Ribosomal protein S21 N8E86_11215 PF10410 DnaB-helicase binding domain of primase N8E86_11215 PF08278 DNA primase DnaG DnaB-binding N8E86_11215 PF08275 DNA primase catalytic core, N-terminal domain N8E86_11215 PF01807 CHC2 zinc finger N8E86_11220 PF04539 Sigma-70 region 3 N8E86_11220 PF04542 Sigma-70 region 2 N8E86_11220 PF04545 Sigma-70, region 4 N8E86_11220 PF03979 Sigma-70 factor, region 1.1 N8E86_11220 PF04546 Sigma-70, non-essential region N8E86_11220 PF00140 Sigma-70 factor, region 1.2 N8E86_11235 PF04175 Protein of unknown function (DUF406) N8E86_11240 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain N8E86_11240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N8E86_11245 PF01909 Nucleotidyltransferase domain N8E86_11250 PF08780 Nucleotidyltransferase substrate binding protein like N8E86_11255 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N8E86_11260 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain N8E86_11260 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain N8E86_11265 PF00459 Inositol monophosphatase family N8E86_11270 PF03169 OPT oligopeptide transporter protein N8E86_11275 PF01479 S4 domain N8E86_11280 PF01430 Hsp33 protein N8E86_11285 PF01293 Phosphoenolpyruvate carboxykinase N8E86_11290 PF01340 Met Apo-repressor, MetJ N8E86_11295 PF00338 Ribosomal protein S10p/S20e N8E86_11300 PF00297 Ribosomal protein L3 N8E86_11305 PF00573 Ribosomal protein L4/L1 family N8E86_11310 PF00276 Ribosomal protein L23 N8E86_11315 PF00181 Ribosomal Proteins L2, RNA binding domain N8E86_11315 PF03947 Ribosomal Proteins L2, C-terminal domain N8E86_11320 PF00203 Ribosomal protein S19 N8E86_11325 PF00237 Ribosomal protein L22p/L17e N8E86_11330 PF07650 KH domain N8E86_11330 PF00189 Ribosomal protein S3, C-terminal domain N8E86_11335 PF00252 Ribosomal protein L16p/L10e N8E86_11340 PF00831 Ribosomal L29 protein N8E86_11345 PF00366 Ribosomal protein S17 N8E86_11355 PF13356 Arm DNA-binding domain N8E86_11355 PF14659 Phage integrase, N-terminal SAM-like domain N8E86_11355 PF00589 Phage integrase family N8E86_11425 PF03592 Terminase small subunit N8E86_11490 PF02096 60Kd inner membrane protein N8E86_11490 PF14849 YidC periplasmic domain N8E86_11495 PF01809 Putative membrane protein insertion efficiency factor N8E86_11500 PF00825 Ribonuclease P N8E86_11505 PF00468 Ribosomal protein L34