locus-tag class description N8E87_00005 PF00308 Bacterial dnaA protein N8E87_00005 PF08299 Bacterial dnaA protein helix-turn-helix N8E87_00005 PF11638 DnaA N-terminal domain N8E87_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain N8E87_00010 PF02767 DNA polymerase III beta subunit, central domain N8E87_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain N8E87_00015 PF02463 RecF/RecN/SMC N terminal domain N8E87_00020 PF02592 Putative vitamin uptake transporter N8E87_00025 PF02565 Recombination protein O C terminal N8E87_00025 PF11967 Recombination protein O N terminal N8E87_00030 PF01938 TRAM domain N8E87_00030 PF05958 tRNA (Uracil-5-)-methyltransferase N8E87_00035 PF02824 TGS domain N8E87_00035 PF04607 Region found in RelA / SpoT proteins N8E87_00035 PF13291 ACT domain N8E87_00040 PF01219 Prokaryotic diacylglycerol kinase N8E87_00045 PF00710 Asparaginase, N-terminal N8E87_00045 PF17763 Glutaminase/Asparaginase C-terminal domain N8E87_00055 PF02152 Dihydroneopterin aldolase N8E87_00060 PF02660 Glycerol-3-phosphate acyltransferase N8E87_00065 PF01327 Polypeptide deformylase N8E87_00070 PF17358 Family of unknown function (DUF5384) N8E87_00075 PF05433 Glycine zipper 2TM domain N8E87_00080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N8E87_00080 PF00205 Thiamine pyrophosphate enzyme, central domain N8E87_00080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N8E87_00085 PF01261 Xylose isomerase-like TIM barrel N8E87_00090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N8E87_00090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N8E87_00095 PF02678 Pirin N8E87_00095 PF05726 Pirin C-terminal cupin domain N8E87_00100 PF03358 NADPH-dependent FMN reductase N8E87_00105 PF02769 AIR synthase related protein, C-terminal domain N8E87_00105 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain N8E87_00105 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal N8E87_00110 PF00696 Amino acid kinase family N8E87_00110 PF01472 PUA domain N8E87_00115 PF00535 Glycosyl transferase family 2 N8E87_00120 PF04932 O-Antigen ligase N8E87_00125 PF09976 Tetratricopeptide repeat-like domain N8E87_00130 PF03129 Anticodon binding domain N8E87_00130 PF13393 Histidyl-tRNA synthetase N8E87_00135 PF04551 GcpE protein N8E87_00140 PF13464 Domain of unknown function (DUF4115) N8E87_00145 PF03600 Citrate transporter N8E87_00145 PF02080 TrkA-C domain N8E87_00150 PF01066 CDP-alcohol phosphatidyltransferase N8E87_00165 PF00994 Probable molybdopterin binding domain N8E87_00170 PF00543 Nitrogen regulatory protein P-II N8E87_00175 PF01594 AI-2E family transporter N8E87_00180 PF04055 Radical SAM superfamily N8E87_00190 PF02481 DNA recombination-mediator protein A N8E87_00190 PF17782 DprA winged helix domain N8E87_00200 PF02881 SRP54-type protein, helical bundle domain N8E87_00200 PF00448 SRP54-type protein, GTPase domain N8E87_00205 PF03009 Glycerophosphoryl diester phosphodiesterase family N8E87_00210 PF07690 Major Facilitator Superfamily N8E87_00215 PF01266 FAD dependent oxidoreductase N8E87_00215 PF04324 BFD-like [2Fe-2S] binding domain N8E87_00220 PF00890 FAD binding domain N8E87_00225 PF13183 4Fe-4S dicluster domain N8E87_00225 PF02754 Cysteine-rich domain N8E87_00230 PF00455 DeoR C terminal sensor domain N8E87_00230 PF08220 DeoR-like helix-turn-helix domain N8E87_00235 PF01694 Rhomboid family N8E87_00240 PF17364 Family of unknown function (DUF5389) N8E87_00245 PF02222 ATP-grasp domain N8E87_00245 PF01370 NAD dependent epimerase/dehydratase family N8E87_00250 PF00579 tRNA synthetases class I (W and Y) N8E87_00255 PF13419 Haloacid dehalogenase-like hydrolase N8E87_00260 PF00834 Ribulose-phosphate 3 epimerase family N8E87_00265 PF01810 LysE type translocator N8E87_00270 PF01042 Endoribonuclease L-PSP N8E87_00290 PF12762 ISXO2-like transposase domain N8E87_00295 PF01063 Amino-transferase class IV N8E87_00300 PF00425 chorismate binding enzyme N8E87_00305 PF00117 Glutamine amidotransferase class-I N8E87_00310 PF00210 Ferritin-like domain N8E87_00320 PF10396 GTP-binding protein TrmE N-terminus N8E87_00320 PF12631 MnmE helical domain N8E87_00320 PF01926 50S ribosome-binding GTPase N8E87_00325 PF01687 Riboflavin kinase N8E87_00325 PF06574 FAD synthetase N8E87_00330 PF08264 Anticodon-binding domain of tRNA N8E87_00330 PF00133 tRNA synthetases class I (I, L, M and V) N8E87_00335 PF01252 Signal peptidase (SPase) II N8E87_00340 PF02401 LytB protein N8E87_00350 PF00486 Transcriptional regulatory protein, C terminal N8E87_00350 PF00072 Response regulator receiver domain N8E87_00355 PF08521 Two-component sensor kinase N-terminal N8E87_00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E87_00355 PF00512 His Kinase A (phospho-acceptor) domain N8E87_00370 PF00206 Lyase N8E87_00370 PF14698 Argininosuccinate lyase C-terminal N8E87_00375 PF00696 Amino acid kinase family N8E87_00380 PF01118 Semialdehyde dehydrogenase, NAD binding domain N8E87_00380 PF02774 Semialdehyde dehydrogenase, dimerisation domain N8E87_00385 PF07687 Peptidase dimerisation domain N8E87_00385 PF01546 Peptidase family M20/M25/M40 N8E87_00395 PF00749 tRNA synthetases class I (E and Q), catalytic domain N8E87_00415 PF02091 Glycyl-tRNA synthetase alpha subunit N8E87_00425 PF13417 Glutathione S-transferase, N-terminal domain N8E87_00430 PF06250 YhcG PDDEXK nuclease domain N8E87_00430 PF17761 DUF1016 N-terminal domain N8E87_00440 PF05746 DALR anticodon binding domain N8E87_00440 PF02092 Glycyl-tRNA synthetase beta subunit N8E87_00445 PF06002 Alpha-2,3-sialyltransferase (CST-I) N8E87_00455 PF00905 Penicillin binding protein transpeptidase domain N8E87_00455 PF00912 Transglycosylase N8E87_00455 PF17092 Penicillin-binding protein OB-like domain N8E87_00460 PF11104 Type IV pilus assembly protein PilM; N8E87_00475 PF03958 Bacterial type II/III secretion system short domain N8E87_00475 PF00263 Bacterial type II and III secretion system protein N8E87_00480 PF01202 Shikimate kinase N8E87_00485 PF01761 3-dehydroquinate synthase N8E87_00490 PF02086 D12 class N6 adenine-specific DNA methyltransferase N8E87_00495 PF05258 Dna[CI] antecedent, DciA N8E87_00500 PF10818 Protein of unknown function (DUF2547) N8E87_00505 PF02810 SEC-C motif N8E87_00505 PF07517 SecA DEAD-like domain N8E87_00505 PF01043 SecA preprotein cross-linking domain N8E87_00505 PF07516 SecA Wing and Scaffold domain N8E87_00510 PF00293 NUDIX domain N8E87_00515 PF00270 DEAD/DEAH box helicase N8E87_00515 PF02559 CarD-like/TRCF domain N8E87_00515 PF17757 UvrB interaction domain N8E87_00515 PF03461 TRCF domain N8E87_00515 PF00271 Helicase conserved C-terminal domain N8E87_00525 PF13580 SIS domain N8E87_00530 PF01464 Transglycosylase SLT domain N8E87_00530 PF00497 Bacterial extracellular solute-binding proteins, family 3 N8E87_00540 PF13356 Arm DNA-binding domain N8E87_00540 PF00589 Phage integrase family N8E87_00565 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N8E87_00605 PF00589 Phage integrase family N8E87_00610 PF13356 Arm DNA-binding domain N8E87_00610 PF00589 Phage integrase family N8E87_00620 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N8E87_00625 PF00166 Chaperonin 10 Kd subunit N8E87_00630 PF00118 TCP-1/cpn60 chaperonin family N8E87_00635 PF00291 Pyridoxal-phosphate dependent enzyme N8E87_00645 PF04354 ZipA, C-terminal FtsZ-binding domain N8E87_00650 PF00533 BRCA1 C Terminus (BRCT) domain N8E87_00650 PF01653 NAD-dependent DNA ligase adenylation domain N8E87_00650 PF03120 NAD-dependent DNA ligase OB-fold domain N8E87_00650 PF12826 Helix-hairpin-helix motif N8E87_00650 PF03119 NAD-dependent DNA ligase C4 zinc finger domain N8E87_00655 PF03477 ATP cone domain N8E87_00655 PF13597 Anaerobic ribonucleoside-triphosphate reductase N8E87_00665 PF01026 TatD related DNase N8E87_00670 PF00490 Delta-aminolevulinic acid dehydratase N8E87_00675 PF00902 Sec-independent protein translocase protein (TatC) N8E87_00685 PF02416 mttA/Hcf106 family N8E87_00690 PF03109 ABC1 family N8E87_00695 PF02036 SCP-2 sterol transfer family N8E87_00700 PF01209 ubiE/COQ5 methyltransferase family N8E87_00705 PF00939 Sodium:sulfate symporter transmembrane region N8E87_00710 PF03737 Aldolase/RraA N8E87_00715 PF01040 UbiA prenyltransferase family N8E87_00720 PF18389 TrmO C-terminal domain N8E87_00720 PF01980 tRNA-methyltransferase O N8E87_00725 PF00230 Major intrinsic protein N8E87_00730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N8E87_00730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N8E87_00735 PF00589 Phage integrase family N8E87_00735 PF02899 Phage integrase, N-terminal SAM-like domain N8E87_00740 PF01812 5-formyltetrahydrofolate cyclo-ligase family N8E87_00750 PF05164 Cell division protein ZapA N8E87_00755 PF03695 Uncharacterised protein family (UPF0149) N8E87_00760 PF00557 Metallopeptidase family M24 N8E87_00760 PF05195 Aminopeptidase P, N-terminal domain N8E87_00765 PF01494 FAD binding domain N8E87_00770 PF01494 FAD binding domain N8E87_00775 PF13407 Periplasmic binding protein domain N8E87_00780 PF13407 Periplasmic binding protein domain N8E87_00785 PF00005 ABC transporter N8E87_00790 PF02653 Branched-chain amino acid transport system / permease component N8E87_00795 PF00027 Cyclic nucleotide-binding domain N8E87_00795 PF13545 Crp-like helix-turn-helix domain N8E87_00800 PF06794 Uncharacterised protein family (UPF0270) N8E87_00805 PF00440 Bacterial regulatory proteins, tetR family N8E87_00810 PF00692 dUTPase N8E87_00815 PF04127 DNA / pantothenate metabolism flavoprotein N8E87_00815 PF02441 Flavoprotein N8E87_00820 PF04002 RadC-like JAB domain N8E87_00825 PF00830 Ribosomal L28 family N8E87_00830 PF00471 Ribosomal protein L33 N8E87_00835 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain N8E87_00835 PF06827 Zinc finger found in FPG and IleRS N8E87_00835 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain N8E87_00840 PF00701 Dihydrodipicolinate synthetase family N8E87_00845 PF01380 SIS domain N8E87_00845 PF01418 Helix-turn-helix domain, rpiR family N8E87_00850 PF04074 YhcH/YjgK/YiaL N8E87_00855 PF00480 ROK family N8E87_00860 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase N8E87_00865 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N8E87_00865 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N8E87_00870 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N8E87_00875 PF09190 DALR domain N8E87_00875 PF01406 tRNA synthetases class I (C) catalytic domain N8E87_00880 PF05860 haemagglutination activity domain N8E87_00885 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB N8E87_00885 PF08479 POTRA domain, ShlB-type N8E87_00890 PF07715 TonB-dependent Receptor Plug Domain N8E87_00890 PF00593 TonB dependent receptor N8E87_00895 PF06228 Haem utilisation ChuX/HutX N8E87_00900 PF01243 Pyridoxamine 5'-phosphate oxidase N8E87_00905 PF04093 rod shape-determining protein MreD N8E87_00910 PF04085 rod shape-determining protein MreC N8E87_00920 PF17760 UvrA interaction domain N8E87_00920 PF17755 UvrA DNA-binding domain N8E87_00925 PF00436 Single-strand binding protein family N8E87_00935 PF02129 X-Pro dipeptidyl-peptidase (S15 family) N8E87_00950 PF12762 ISXO2-like transposase domain N8E87_00985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E87_00985 PF03466 LysR substrate binding domain N8E87_00990 PF03605 Anaerobic c4-dicarboxylate membrane transporter N8E87_00995 PF00550 Phosphopantetheine attachment site N8E87_01005 PF00698 Acyl transferase domain N8E87_01010 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N8E87_01010 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N8E87_01015 PF02504 Fatty acid synthesis protein N8E87_01020 PF01783 Ribosomal L32p protein family N8E87_01025 PF02620 Large ribosomal RNA subunit accumulation protein YceD N8E87_01035 PF08241 Methyltransferase domain N8E87_01040 PF04301 Protein of unknown function (DUF452) N8E87_01045 PF00155 Aminotransferase class I and II N8E87_01050 PF00202 Aminotransferase class-III N8E87_01060 PF02666 Phosphatidylserine decarboxylase N8E87_01065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N8E87_01065 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N8E87_01070 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N8E87_01070 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N8E87_01075 PF00625 Guanylate kinase N8E87_01080 PF01192 RNA polymerase Rpb6 N8E87_01085 PF02824 TGS domain N8E87_01085 PF04607 Region found in RelA / SpoT proteins N8E87_01085 PF13291 ACT domain N8E87_01090 PF17191 RecG wedge domain N8E87_01090 PF00271 Helicase conserved C-terminal domain N8E87_01090 PF00270 DEAD/DEAH box helicase N8E87_01095 PF01177 Asp/Glu/Hydantoin racemase N8E87_01135 PF08218 Citrate lyase ligase C-terminal domain N8E87_01140 PF06857 Malonate decarboxylase delta subunit (MdcD) N8E87_01145 PF03328 HpcH/HpaI aldolase/citrate lyase family N8E87_01150 PF04223 Citrate lyase, alpha subunit (CitF) N8E87_01155 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase N8E87_01155 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase N8E87_01160 PF00939 Sodium:sulfate symporter transmembrane region N8E87_01165 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase N8E87_01170 PF04977 Septum formation initiator N8E87_01175 PF01344 Kelch motif N8E87_01180 PF03480 Bacterial extracellular solute-binding protein, family 7 N8E87_01185 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N8E87_01190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N8E87_01195 PF03611 PTS system sugar-specific permease component N8E87_01205 PF08220 DeoR-like helix-turn-helix domain N8E87_01205 PF00455 DeoR C terminal sensor domain N8E87_01210 PF01261 Xylose isomerase-like TIM barrel N8E87_01215 PF00596 Class II Aldolase and Adducin N-terminal domain N8E87_01225 PF17946 RecC C-terminal domain N8E87_01245 PF07963 Prokaryotic N-terminal methylation motif N8E87_01265 PF00691 OmpA family N8E87_01270 PF04052 TolB amino-terminal domain N8E87_01270 PF07676 WD40-like Beta Propeller Repeat N8E87_01275 PF06519 TolA C-terminal N8E87_01280 PF02472 Biopolymer transport protein ExbD/TolR N8E87_01285 PF01618 MotA/TolQ/ExbB proton channel family N8E87_01290 PF03061 Thioesterase superfamily N8E87_01295 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) N8E87_01305 PF02322 Cytochrome bd terminal oxidase subunit II N8E87_01310 PF01654 Cytochrome bd terminal oxidase subunit I N8E87_01315 PF17274 Family of unknown function (DUF5339) N8E87_01320 PF00156 Phosphoribosyl transferase domain N8E87_01325 PF01523 Putative modulator of DNA gyrase N8E87_01330 PF04751 Protein of unknown function (DUF615) N8E87_01335 PF00483 Nucleotidyl transferase N8E87_01335 PF01050 Mannose-6-phosphate isomerase N8E87_01340 PF16363 GDP-mannose 4,6 dehydratase N8E87_01345 PF01370 NAD dependent epimerase/dehydratase family N8E87_01365 PF00535 Glycosyl transferase family 2 N8E87_01370 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) N8E87_01375 PF00005 ABC transporter N8E87_01380 PF01061 ABC-2 type transporter N8E87_01385 PF03144 Elongation factor Tu domain 2 N8E87_01385 PF00009 Elongation factor Tu GTP binding domain N8E87_01385 PF00679 Elongation factor G C-terminus N8E87_01390 PF00120 Glutamine synthetase, catalytic domain N8E87_01390 PF03951 Glutamine synthetase, beta-Grasp domain N8E87_01400 PF02772 S-adenosylmethionine synthetase, central domain N8E87_01400 PF00438 S-adenosylmethionine synthetase, N-terminal domain N8E87_01400 PF02773 S-adenosylmethionine synthetase, C-terminal domain N8E87_01405 PF00795 Carbon-nitrogen hydrolase N8E87_01410 PF03471 Transporter associated domain N8E87_01410 PF00571 CBS domain N8E87_01415 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_01420 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_01425 PF00497 Bacterial extracellular solute-binding proteins, family 3 N8E87_01430 PF00005 ABC transporter N8E87_01435 PF01594 AI-2E family transporter N8E87_01440 PF03960 ArsC family N8E87_01445 PF03889 Alternative ribosome-rescue factor A N8E87_01450 PF17347 Family of unknown function (DUF5377) N8E87_01455 PF00448 SRP54-type protein, GTPase domain N8E87_01455 PF02881 SRP54-type protein, helical bundle domain N8E87_01455 PF02978 Signal peptide binding domain N8E87_01460 PF01578 Cytochrome C assembly protein N8E87_01465 PF03471 Transporter associated domain N8E87_01465 PF01595 Cyclin M transmembrane N-terminal domain N8E87_01465 PF00571 CBS domain N8E87_01470 PF01618 MotA/TolQ/ExbB proton channel family N8E87_01475 PF02472 Biopolymer transport protein ExbD/TolR N8E87_01480 PF03544 Gram-negative bacterial TonB protein C-terminal N8E87_01485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N8E87_01485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N8E87_01485 PF02378 Phosphotransferase system, EIIC N8E87_01490 PF01232 Mannitol dehydrogenase Rossmann domain N8E87_01490 PF08125 Mannitol dehydrogenase C-terminal domain N8E87_01495 PF05068 Mannitol repressor N8E87_01500 PF04488 Glycosyltransferase sugar-binding region containing DXD motif N8E87_01505 PF01367 5'-3' exonuclease, C-terminal SAM fold N8E87_01505 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N8E87_01505 PF00476 DNA polymerase family A N8E87_01505 PF01612 3'-5' exonuclease N8E87_01510 PF03471 Transporter associated domain N8E87_01510 PF00999 Sodium/hydrogen exchanger family N8E87_01510 PF02080 TrkA-C domain N8E87_01515 PF02028 BCCT, betaine/carnitine/choline family transporter N8E87_01520 PF05697 Bacterial trigger factor protein (TF) N8E87_01520 PF05698 Bacterial trigger factor protein (TF) C-terminus N8E87_01520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N8E87_01525 PF00574 Clp protease N8E87_01530 PF07724 AAA domain (Cdc48 subfamily) N8E87_01530 PF06689 ClpX C4-type zinc finger N8E87_01530 PF10431 C-terminal, D2-small domain, of ClpB protein N8E87_01535 PF00206 Lyase N8E87_01535 PF10415 Fumarase C C-terminus N8E87_01540 PF00501 AMP-binding enzyme N8E87_01545 PF00583 Acetyltransferase (GNAT) family N8E87_01550 PF03603 DNA polymerase III psi subunit N8E87_01555 PF10431 C-terminal, D2-small domain, of ClpB protein N8E87_01555 PF00004 ATPase family associated with various cellular activities (AAA) N8E87_01555 PF07724 AAA domain (Cdc48 subfamily) N8E87_01560 PF00227 Proteasome subunit N8E87_01565 PF01040 UbiA prenyltransferase family N8E87_01570 PF00581 Rhodanese-like domain N8E87_01575 PF05525 Branched-chain amino acid transport protein N8E87_01580 PF16921 Tex protein YqgF-like domain N8E87_01580 PF09371 Tex-like protein N-terminal domain N8E87_01580 PF00575 S1 RNA binding domain N8E87_01580 PF17674 HHH domain N8E87_01595 PF03449 Transcription elongation factor, N-terminal N8E87_01595 PF01272 Transcription elongation factor, GreA/GreB, C-term N8E87_01600 PF00440 Bacterial regulatory proteins, tetR family N8E87_01605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N8E87_01610 PF00873 AcrB/AcrD/AcrF family N8E87_01615 PF03932 CutC family N8E87_01620 PF02378 Phosphotransferase system, EIIC N8E87_01625 PF01112 Asparaginase N8E87_01635 PF02789 Cytosol aminopeptidase family, N-terminal domain N8E87_01635 PF00883 Cytosol aminopeptidase family, catalytic domain N8E87_01640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N8E87_01645 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit N8E87_01655 PF03952 Enolase, N-terminal domain N8E87_01655 PF00113 Enolase, C-terminal TIM barrel domain N8E87_01660 PF07119 Protein of unknown function (DUF1375) N8E87_01665 PF13361 UvrD-like helicase C-terminal domain N8E87_01665 PF00580 UvrD/REP helicase N-terminal domain N8E87_01685 PF00186 Dihydrofolate reductase N8E87_01690 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain N8E87_01690 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain N8E87_01705 PF01207 Dihydrouridine synthase (Dus) N8E87_01710 PF00654 Voltage gated chloride channel N8E87_01715 PF01048 Phosphorylase superfamily N8E87_01720 PF01676 Metalloenzyme superfamily N8E87_01725 PF07662 Na+ dependent nucleoside transporter C-terminus N8E87_01725 PF01773 Na+ dependent nucleoside transporter N-terminus N8E87_01725 PF07670 Nucleoside recognition N8E87_01730 PF17283 SprT-like zinc ribbon domain N8E87_01730 PF10263 SprT-like family N8E87_01735 PF02462 Opacity family porin protein N8E87_01740 PF00183 Hsp90 protein N8E87_01740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E87_01750 PF01648 4'-phosphopantetheinyl transferase superfamily N8E87_01760 PF01145 SPFH domain / Band 7 family N8E87_01770 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) N8E87_01775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N8E87_01775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N8E87_01780 PF04851 Type III restriction enzyme, res subunit N8E87_01780 PF08463 EcoEI R protein C-terminal N8E87_01780 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) N8E87_01780 PF00271 Helicase conserved C-terminal domain N8E87_01785 PF02618 YceG-like family N8E87_01790 PF02223 Thymidylate kinase N8E87_01795 PF09115 DNA polymerase III, delta subunit, C terminal N8E87_01800 PF01026 TatD related DNase N8E87_01805 PF07509 Protein of unknown function (DUF1523) N8E87_01810 PF01595 Cyclin M transmembrane N-terminal domain N8E87_01810 PF00571 CBS domain N8E87_01810 PF03471 Transporter associated domain N8E87_01815 PF01197 Ribosomal protein L31 N8E87_01820 PF00270 DEAD/DEAH box helicase N8E87_01820 PF17764 3′ DNA-binding domain (3′BD) N8E87_01820 PF18074 Primosomal protein N C-terminal domain N8E87_01820 PF18319 PriA DNA helicase Cys-rich region (CRR) domain N8E87_01820 PF00271 Helicase conserved C-terminal domain N8E87_01825 PF05036 Sporulation related domain N8E87_01830 PF00174 Oxidoreductase molybdopterin binding domain N8E87_01835 PF01794 Ferric reductase like transmembrane component N8E87_01840 PF05958 tRNA (Uracil-5-)-methyltransferase N8E87_01845 PF00933 Glycosyl hydrolase family 3 N terminal domain N8E87_01855 PF01230 HIT domain N8E87_01860 PF01226 Formate/nitrite transporter N8E87_01865 PF01228 Glycine radical N8E87_01865 PF02901 Pyruvate formate lyase-like N8E87_01870 PF04055 Radical SAM superfamily N8E87_01880 PF01263 Aldose 1-epimerase N8E87_01885 PF00288 GHMP kinases N terminal domain N8E87_01885 PF10509 Galactokinase galactose-binding signature N8E87_01885 PF08544 GHMP kinases C terminal N8E87_01890 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain N8E87_01890 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain N8E87_01895 PF13407 Periplasmic binding protein domain N8E87_01905 PF02653 Branched-chain amino acid transport system / permease component N8E87_01910 PF03918 Cytochrome C biogenesis protein N8E87_01915 PF03918 Cytochrome C biogenesis protein N8E87_01920 PF08534 Redoxin N8E87_01925 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal N8E87_01925 PF01578 Cytochrome C assembly protein N8E87_01930 PF03100 CcmE N8E87_01935 PF04995 Heme exporter protein D (CcmD) N8E87_01940 PF01578 Cytochrome C assembly protein N8E87_01945 PF03379 CcmB protein N8E87_01950 PF00005 ABC transporter N8E87_01955 PF08502 LeuA allosteric (dimerisation) domain N8E87_01955 PF00682 HMGL-like N8E87_01960 PF00180 Isocitrate/isopropylmalate dehydrogenase N8E87_01965 PF00330 Aconitase family (aconitate hydratase) N8E87_01970 PF00694 Aconitase C-terminal domain N8E87_01975 PF00308 Bacterial dnaA protein N8E87_01980 PF00860 Permease family N8E87_01990 PF04345 Chorismate lyase N8E87_01995 PF01502 Phosphoribosyl-AMP cyclohydrolase N8E87_01995 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase N8E87_02005 PF00977 Histidine biosynthesis protein N8E87_02015 PF00977 Histidine biosynthesis protein N8E87_02020 PF00578 AhpC/TSA family N8E87_02025 PF00117 Glutamine amidotransferase class-I N8E87_02030 PF17761 DUF1016 N-terminal domain N8E87_02030 PF06250 YhcG PDDEXK nuclease domain N8E87_02035 PF00475 Imidazoleglycerol-phosphate dehydratase N8E87_02045 PF00155 Aminotransferase class I and II N8E87_02055 PF00815 Histidinol dehydrogenase N8E87_02060 PF01634 ATP phosphoribosyltransferase N8E87_02060 PF08029 HisG, C-terminal domain N8E87_02065 PF08241 Methyltransferase domain N8E87_02070 PF03222 Tryptophan/tyrosine permease family N8E87_02075 PF00719 Inorganic pyrophosphatase N8E87_02080 PF01435 Peptidase family M48 N8E87_02080 PF07720 Tetratricopeptide repeat N8E87_02090 PF01476 LysM domain N8E87_02090 PF01551 Peptidase family M23 N8E87_02100 PF09335 SNARE associated Golgi protein N8E87_02105 PF01975 Survival protein SurE N8E87_02110 PF01142 tRNA pseudouridine synthase D (TruD) N8E87_02115 PF02542 YgbB family N8E87_02125 PF13419 Haloacid dehalogenase-like hydrolase N8E87_02130 PF14602 Hexapeptide repeat of succinyl-transferase N8E87_02130 PF12464 Maltose acetyltransferase N8E87_02140 PF02664 S-Ribosylhomocysteinase (LuxS) N8E87_02145 PF06969 HemN C-terminal domain N8E87_02145 PF04055 Radical SAM superfamily N8E87_02150 PF01725 Ham1 family N8E87_02160 PF00860 Permease family N8E87_02170 PF01370 NAD dependent epimerase/dehydratase family N8E87_02175 PF07690 Major Facilitator Superfamily N8E87_02180 PF01758 Sodium Bile acid symporter family N8E87_02185 PF00512 His Kinase A (phospho-acceptor) domain N8E87_02185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E87_02185 PF00989 PAS fold N8E87_02185 PF00072 Response regulator receiver domain N8E87_02185 PF01627 Hpt domain N8E87_02185 PF18415 Histidine kinase receptor ArcB trans-membrane domain N8E87_02190 PF01176 Translation initiation factor 1A / IF-1 N8E87_02200 PF12404 Peptidase N8E87_02200 PF00883 Cytosol aminopeptidase family, catalytic domain N8E87_02205 PF00334 Nucleoside diphosphate kinase N8E87_02210 PF00365 Phosphofructokinase N8E87_02215 PF16916 Dimerisation domain of Zinc Transporter N8E87_02215 PF01545 Cation efflux family N8E87_02225 PF03883 Peroxide stress protein YaaA N8E87_02230 PF03167 Uracil DNA glycosylase superfamily N8E87_02235 PF01228 Glycine radical N8E87_02240 PF06421 GTP-binding protein LepA C-terminus N8E87_02240 PF03144 Elongation factor Tu domain 2 N8E87_02240 PF00009 Elongation factor Tu GTP binding domain N8E87_02240 PF00679 Elongation factor G C-terminus N8E87_02245 PF10502 Signal peptidase, peptidase S26 N8E87_02250 PF14622 Ribonuclease-III-like N8E87_02250 PF00035 Double-stranded RNA binding motif N8E87_02255 PF07650 KH domain N8E87_02255 PF01926 50S ribosome-binding GTPase N8E87_02260 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal N8E87_02260 PF01926 50S ribosome-binding GTPase N8E87_02265 PF08461 Ribonuclease R winged-helix domain N8E87_02265 PF00575 S1 RNA binding domain N8E87_02265 PF00773 RNB domain N8E87_02265 PF08206 Ribonuclease B OB domain N8E87_02265 PF17876 Cold shock domain N8E87_02270 PF08032 RNA 2'-O ribose methyltransferase substrate binding N8E87_02270 PF00588 SpoU rRNA Methylase family N8E87_02275 PF07690 Major Facilitator Superfamily N8E87_02280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N8E87_02280 PF00529 HlyD membrane-fusion protein of T1SS N8E87_02285 PF01047 MarR family N8E87_02290 PF03601 Conserved hypothetical protein 698 N8E87_02295 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB N8E87_02295 PF17287 POTRA domain N8E87_02295 PF08479 POTRA domain, ShlB-type N8E87_02300 PF13018 Extended Signal Peptide of Type V secretion system N8E87_02300 PF13332 Hemagglutinin repeat N8E87_02300 PF05860 haemagglutination activity domain N8E87_02300 PF13018 Extended Signal Peptide of Type V secretion system N8E87_02300 PF04829 Pre-toxin domain with VENN motif N8E87_02300 PF05860 haemagglutination activity domain N8E87_02300 PF13332 Hemagglutinin repeat N8E87_02300 PF04829 Pre-toxin domain with VENN motif N8E87_02310 PF04829 Pre-toxin domain with VENN motif N8E87_02310 PF15605 Bacterial toxin 28 N8E87_02310 PF05860 haemagglutination activity domain N8E87_02310 PF13332 Hemagglutinin repeat N8E87_02330 PF04829 Pre-toxin domain with VENN motif N8E87_02330 PF05860 haemagglutination activity domain N8E87_02330 PF13332 Hemagglutinin repeat N8E87_02330 PF14436 Bacterial EndoU nuclease N8E87_02330 PF05594 Haemagluttinin repeat N8E87_02355 PF01926 50S ribosome-binding GTPase N8E87_02355 PF01018 GTP1/OBG N8E87_02360 PF00892 EamA-like transporter family N8E87_02365 PF01016 Ribosomal L27 protein N8E87_02370 PF00829 Ribosomal prokaryotic L21 protein N8E87_02375 PF00348 Polyprenyl synthetase N8E87_02380 PF02677 Epoxyqueuosine reductase QueH N8E87_02385 PF00085 Thioredoxin N8E87_02390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N8E87_02390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N8E87_02395 PF01053 Cys/Met metabolism PLP-dependent enzyme N8E87_02415 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N8E87_02420 PF06508 Queuosine biosynthesis protein QueC N8E87_02425 PF01242 6-pyruvoyl tetrahydropterin synthase N8E87_02430 PF04055 Radical SAM superfamily N8E87_02435 PF14743 DNA ligase OB-like domain N8E87_02435 PF01068 ATP dependent DNA ligase domain N8E87_02440 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N8E87_02445 PF01979 Amidohydrolase family N8E87_02450 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N8E87_02455 PF00303 Thymidylate synthase N8E87_02460 PF01790 Prolipoprotein diacylglyceryl transferase N8E87_02465 PF01925 Sulfite exporter TauE/SafE N8E87_02470 PF00293 NUDIX domain N8E87_02475 PF01510 N-acetylmuramoyl-L-alanine amidase N8E87_02480 PF07963 Prokaryotic N-terminal methylation motif N8E87_02485 PF00437 Type II/IV secretion system protein N8E87_02485 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N8E87_02490 PF00696 Amino acid kinase family N8E87_02495 PF01765 Ribosome recycling factor N8E87_02500 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain N8E87_02500 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase N8E87_02500 PF13288 DXP reductoisomerase C-terminal domain N8E87_02505 PF01255 Putative undecaprenyl diphosphate synthase N8E87_02515 PF02163 Peptidase family M50 N8E87_02520 PF01103 Surface antigen N8E87_02520 PF07244 Surface antigen variable number repeat N8E87_02525 PF03938 Outer membrane protein (OmpH-like) N8E87_02530 PF00132 Bacterial transferase hexapeptide (six repeats) N8E87_02530 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD N8E87_02535 PF07977 FabA-like domain N8E87_02540 PF00132 Bacterial transferase hexapeptide (six repeats) N8E87_02540 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 N8E87_02545 PF02684 Lipid-A-disaccharide synthetase N8E87_02550 PF01351 Ribonuclease HII N8E87_02560 PF06144 DNA polymerase III, delta subunit N8E87_02560 PF14840 Processivity clamp loader gamma complex DNA pol III C-term N8E87_02565 PF04390 Lipopolysaccharide-assembly N8E87_02570 PF00133 tRNA synthetases class I (I, L, M and V) N8E87_02570 PF13603 Leucyl-tRNA synthetase, Domain 2 N8E87_02570 PF08264 Anticodon-binding domain of tRNA N8E87_02575 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) N8E87_02580 PF00149 Calcineurin-like phosphoesterase N8E87_02585 PF00398 Ribosomal RNA adenine dimethylase N8E87_02590 PF00639 PPIC-type PPIASE domain N8E87_02590 PF09312 SurA N-terminal domain N8E87_02595 PF00156 Phosphoribosyl transferase domain N8E87_02600 PF00551 Formyl transferase N8E87_02605 PF02769 AIR synthase related protein, C-terminal domain N8E87_02605 PF00586 AIR synthase related protein, N-terminal domain N8E87_02625 PF00929 Exonuclease N8E87_02630 PF00075 RNase H N8E87_02635 PF01238 Phosphomannose isomerase type I N8E87_02640 PF06173 Protein of unknown function (DUF986) N8E87_02645 PF03613 PTS system mannose/fructose/sorbose family IID component N8E87_02650 PF03609 PTS system sorbose-specific iic component N8E87_02655 PF03830 PTS system sorbose subfamily IIB component N8E87_02655 PF03610 PTS system fructose IIA component N8E87_02660 PF00482 Type II secretion system (T2SS), protein F N8E87_02675 PF03884 DNA gyrase inhibitor YacG N8E87_02685 PF01235 Sodium:alanine symporter family N8E87_02690 PF02627 Carboxymuconolactone decarboxylase family N8E87_02695 PF02311 AraC-like ligand binding domain N8E87_02695 PF12833 Helix-turn-helix domain N8E87_02700 PF10063 Uncharacterized integral membrane protein (DUF2301) N8E87_02705 PF05175 Methyltransferase small domain N8E87_02705 PF08468 Methyltransferase small domain N-terminal N8E87_02710 PF00005 ABC transporter N8E87_02710 PF06472 ABC transporter transmembrane region 2 N8E87_02715 PF06826 Predicted Permease Membrane Region N8E87_02715 PF02080 TrkA-C domain N8E87_02725 PF01553 Acyltransferase N8E87_02730 PF01726 LexA DNA binding domain N8E87_02730 PF00717 Peptidase S24-like N8E87_02735 PF00465 Iron-containing alcohol dehydrogenase N8E87_02735 PF00171 Aldehyde dehydrogenase family N8E87_02740 PF00578 AhpC/TSA family N8E87_02745 PF00701 Dihydrodipicolinate synthetase family N8E87_02750 PF12762 ISXO2-like transposase domain N8E87_02755 PF06804 NlpB/DapX lipoprotein N8E87_02760 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ N8E87_02765 PF07992 Pyridine nucleotide-disulphide oxidoreductase N8E87_02765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N8E87_02770 PF02190 ATP-dependent protease La (LON) substrate-binding domain N8E87_02770 PF00004 ATPase family associated with various cellular activities (AAA) N8E87_02770 PF05362 Lon protease (S16) C-terminal proteolytic domain N8E87_02775 PF13145 PPIC-type PPIASE domain N8E87_02780 PF00318 Ribosomal protein S2 N8E87_02785 PF00889 Elongation factor TS N8E87_02790 PF00009 Elongation factor Tu GTP binding domain N8E87_02790 PF03144 Elongation factor Tu domain 2 N8E87_02790 PF16658 Class II release factor RF3, C-terminal domain N8E87_02795 PF01259 SAICAR synthetase N8E87_02810 PF01370 NAD dependent epimerase/dehydratase family N8E87_02815 PF00764 Arginosuccinate synthase N8E87_02820 PF04393 Protein of unknown function (DUF535) N8E87_02825 PF00675 Insulinase (Peptidase family M16) N8E87_02825 PF05193 Peptidase M16 inactive domain N8E87_02830 PF07715 TonB-dependent Receptor Plug Domain N8E87_02835 PF02224 Cytidylate kinase N8E87_02840 PF00575 S1 RNA binding domain N8E87_02845 PF00216 Bacterial DNA-binding protein N8E87_02850 PF06305 Lipopolysaccharide assembly protein A domain N8E87_02855 PF18073 Rubredoxin metal binding domain N8E87_02860 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N8E87_02865 PF01253 Translation initiation factor SUI1 N8E87_02870 PF14572 Phosphoribosyl synthetase-associated domain N8E87_02870 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N8E87_02875 PF08544 GHMP kinases C terminal N8E87_02875 PF00288 GHMP kinases N terminal domain N8E87_02880 PF03550 Outer membrane lipoprotein LolB N8E87_02885 PF00072 Response regulator receiver domain N8E87_02885 PF00486 Transcriptional regulatory protein, C terminal N8E87_02890 PF00464 Serine hydroxymethyltransferase N8E87_02895 PF02843 Phosphoribosylglycinamide synthetase, C domain N8E87_02895 PF02844 Phosphoribosylglycinamide synthetase, N domain N8E87_02895 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain N8E87_02905 PF01808 AICARFT/IMPCHase bienzyme N8E87_02905 PF02142 MGS-like domain N8E87_02920 PF11412 Disulphide bond corrector protein DsbC N8E87_02920 PF02683 Cytochrome C biogenesis protein transmembrane region N8E87_02920 PF00085 Thioredoxin N8E87_02925 PF01197 Ribosomal protein L31 N8E87_02930 PF00444 Ribosomal protein L36 N8E87_02935 PF00005 ABC transporter N8E87_02940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N8E87_02940 PF00005 ABC transporter N8E87_02945 PF12911 N-terminal TM domain of oligopeptide transport permease C N8E87_02945 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_02950 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_02960 PF04317 YcjX-like family, DUF463 N8E87_02965 PF05128 Domain of unknown function (DUF697) N8E87_02970 PF00158 Sigma-54 interaction domain N8E87_02970 PF18024 Helix-turn-helix domain N8E87_02975 PF13520 Amino acid permease N8E87_02985 PF01926 50S ribosome-binding GTPase N8E87_02985 PF06071 Protein of unknown function (DUF933) N8E87_02990 PF01195 Peptidyl-tRNA hydrolase N8E87_02995 PF03364 Polyketide cyclase / dehydrase and lipid transport N8E87_03000 PF03658 RnfH family Ubiquitin N8E87_03005 PF08007 Cupin superfamily protein N8E87_03010 PF02601 Exonuclease VII, large subunit N8E87_03010 PF13742 OB-fold nucleic acid binding domain N8E87_03015 PF01668 SmpB protein N8E87_03020 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase N8E87_03025 PF04225 Opacity-associated protein A LysM-like domain N8E87_03025 PF01551 Peptidase family M23 N8E87_03030 PF00005 ABC transporter N8E87_03035 PF00950 ABC 3 transport family N8E87_03040 PF11867 Domain of unknown function (DUF3387) N8E87_03040 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N8E87_03040 PF18766 SWI2/SNF2 ATPase N8E87_03060 PF11867 Domain of unknown function (DUF3387) N8E87_03060 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N8E87_03060 PF18766 SWI2/SNF2 ATPase N8E87_03070 PF01420 Type I restriction modification DNA specificity domain N8E87_03075 PF02384 N-6 DNA Methylase N8E87_03080 PF00012 Hsp70 protein N8E87_03085 PF00226 DnaJ domain N8E87_03085 PF00684 DnaJ central domain N8E87_03085 PF01556 DnaJ C terminal domain N8E87_03090 PF07670 Nucleoside recognition N8E87_03105 PF00707 Translation initiation factor IF-3, C-terminal domain N8E87_03105 PF05198 Translation initiation factor IF-3, N-terminal domain N8E87_03110 PF01632 Ribosomal protein L35 N8E87_03115 PF00453 Ribosomal protein L20 N8E87_03120 PF00270 DEAD/DEAH box helicase N8E87_03120 PF11898 Domain of unknown function (DUF3418) N8E87_03120 PF04408 Helicase associated domain (HA2) N8E87_03120 PF00271 Helicase conserved C-terminal domain N8E87_03120 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N8E87_03125 PF03992 Antibiotic biosynthesis monooxygenase N8E87_03130 PF01791 DeoC/LacD family aldolase N8E87_03135 PF13407 Periplasmic binding protein domain N8E87_03140 PF02653 Branched-chain amino acid transport system / permease component N8E87_03145 PF02653 Branched-chain amino acid transport system / permease component N8E87_03150 PF00005 ABC transporter N8E87_03155 PF04198 Putative sugar-binding domain N8E87_03155 PF00325 Bacterial regulatory proteins, crp family N8E87_03160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N8E87_03160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N8E87_03165 PF00939 Sodium:sulfate symporter transmembrane region N8E87_03170 PF08267 Cobalamin-independent synthase, N-terminal domain N8E87_03170 PF01717 Cobalamin-independent synthase, Catalytic domain N8E87_03175 PF00884 Sulfatase N8E87_03175 PF08019 Phosphoethanolamine transferase EptA/EptB N8E87_03185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E87_03185 PF03466 LysR substrate binding domain N8E87_03190 PF03591 AzlC protein N8E87_03195 PF05437 Branched-chain amino acid transport protein (AzlD) N8E87_03200 PF07715 TonB-dependent Receptor Plug Domain N8E87_03200 PF00593 TonB dependent receptor N8E87_03210 PF04216 Protein involved in formate dehydrogenase formation N8E87_03215 PF01292 Prokaryotic cytochrome b561 N8E87_03220 PF09163 Formate dehydrogenase N, transmembrane N8E87_03220 PF13247 4Fe-4S dicluster domain N8E87_03230 PF02634 FdhD/NarQ family N8E87_03240 PF00403 Heavy-metal-associated domain N8E87_03245 PF04284 Protein of unknown function (DUF441) N8E87_03250 PF13520 Amino acid permease N8E87_03255 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain N8E87_03255 PF01276 Orn/Lys/Arg decarboxylase, major domain N8E87_03255 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain N8E87_03260 PF10940 Protein of unknown function (DUF2618) N8E87_03290 PF00999 Sodium/hydrogen exchanger family N8E87_03295 PF03372 Endonuclease/Exonuclease/phosphatase family N8E87_03300 PF01042 Endoribonuclease L-PSP N8E87_03305 PF14256 YwiC-like protein N8E87_03320 PF02498 BRO family, N-terminal domain N8E87_03320 PF10548 P22AR C-terminal domain N8E87_03340 PF00436 Single-strand binding protein family N8E87_03390 PF08346 AntA/AntB antirepressor N8E87_03390 PF10548 P22AR C-terminal domain N8E87_03415 PF01726 LexA DNA binding domain N8E87_03415 PF00717 Peptidase S24-like N8E87_03485 PF07927 HicA toxin of bacterial toxin-antitoxin, N8E87_03520 PF05106 Phage holin family (Lysis protein S) N8E87_03545 PF03592 Terminase small subunit N8E87_03555 PF06381 Protein of unknown function (DUF1073) N8E87_03560 PF04233 Phage Mu protein F like protein N8E87_03570 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) N8E87_03615 PF10876 Phage tail assemb.y chaperone protein, TAC N8E87_03670 PF03406 Phage tail fibre repeat N8E87_03685 PF14659 Phage integrase, N-terminal SAM-like domain N8E87_03685 PF00589 Phage integrase family N8E87_03685 PF13356 Arm DNA-binding domain N8E87_03690 PF00117 Glutamine amidotransferase class-I N8E87_03690 PF00958 GMP synthase C terminal domain N8E87_03690 PF02540 NAD synthase N8E87_03705 PF00478 IMP dehydrogenase / GMP reductase domain N8E87_03705 PF00571 CBS domain N8E87_03710 PF02237 Biotin protein ligase C terminal domain N8E87_03710 PF03099 Biotin/lipoate A/B protein ligase family N8E87_03755 PF00290 Tryptophan synthase alpha chain N8E87_03760 PF00291 Pyridoxal-phosphate dependent enzyme N8E87_03765 PF00218 Indole-3-glycerol phosphate synthase N8E87_03765 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase N8E87_03770 PF02885 Glycosyl transferase family, helical bundle domain N8E87_03770 PF00591 Glycosyl transferase family, a/b domain N8E87_03775 PF14552 Tautomerase enzyme N8E87_03780 PF00117 Glutamine amidotransferase class-I N8E87_03785 PF04715 Anthranilate synthase component I, N terminal region N8E87_03785 PF00425 chorismate binding enzyme N8E87_03790 PF00206 Lyase N8E87_03790 PF10415 Fumarase C C-terminus N8E87_03795 PF04364 DNA polymerase III chi subunit, HolC N8E87_03815 PF08264 Anticodon-binding domain of tRNA N8E87_03815 PF00133 tRNA synthetases class I (I, L, M and V) N8E87_03815 PF10458 Valyl tRNA synthetase tRNA binding arm N8E87_03820 PF01066 CDP-alcohol phosphatidyltransferase N8E87_03825 PF02525 Flavodoxin-like fold N8E87_03830 PF12762 ISXO2-like transposase domain N8E87_03850 PF07690 Major Facilitator Superfamily N8E87_03870 PF01965 DJ-1/PfpI family N8E87_03880 PF00106 short chain dehydrogenase N8E87_03885 PF00893 Small Multidrug Resistance protein N8E87_03895 PF04247 Invasion gene expression up-regulator, SirB N8E87_03900 PF03989 DNA gyrase C-terminal domain, beta-propeller N8E87_03900 PF00521 DNA gyrase/topoisomerase IV, subunit A N8E87_03910 PF01475 Ferric uptake regulator family N8E87_03915 PF00258 Flavodoxin N8E87_03920 PF01402 Ribbon-helix-helix protein, copG family N8E87_03925 PF00561 alpha/beta hydrolase fold N8E87_03930 PF17206 SeqA protein N-terminal domain N8E87_03930 PF03925 SeqA protein C-terminal domain N8E87_03935 PF00501 AMP-binding enzyme N8E87_03940 PF12795 Mechanosensitive ion channel porin domain N8E87_03940 PF12794 Mechanosensitive ion channel inner membrane domain 1 N8E87_03940 PF00924 Mechanosensitive ion channel N8E87_03945 PF01264 Chorismate synthase N8E87_03950 PF03411 Penicillin-insensitive murein endopeptidase N8E87_03955 PF01925 Sulfite exporter TauE/SafE N8E87_03960 PF03279 Bacterial lipid A biosynthesis acyltransferase N8E87_03965 PF00156 Phosphoribosyl transferase domain N8E87_03970 PF12169 DNA polymerase III subunits gamma and tau domain III N8E87_03970 PF12170 DNA polymerase III tau subunit V interacting with alpha N8E87_03975 PF02554 Carbon starvation protein CstA N8E87_03980 PF13416 Bacterial extracellular solute-binding protein N8E87_03985 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_03990 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_03995 PF08402 TOBE domain N8E87_03995 PF00005 ABC transporter N8E87_04000 PF07687 Peptidase dimerisation domain N8E87_04000 PF01546 Peptidase family M20/M25/M40 N8E87_04005 PF08335 GlnD PII-uridylyltransferase N8E87_04005 PF03710 Glutamate-ammonia ligase adenylyltransferase N8E87_04015 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_04020 PF00005 ABC transporter N8E87_04025 PF06968 Biotin and Thiamin Synthesis associated domain N8E87_04025 PF04055 Radical SAM superfamily N8E87_04030 PF00027 Cyclic nucleotide-binding domain N8E87_04035 PF01925 Sulfite exporter TauE/SafE N8E87_04045 PF02278 Polysaccharide lyase family 8, super-sandwich domain N8E87_04045 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain N8E87_04045 PF09092 Lyase, N terminal N8E87_04045 PF09093 Lyase, catalytic N8E87_04050 PF03616 Sodium/glutamate symporter N8E87_04055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E87_04055 PF03459 TOBE domain N8E87_04065 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_04075 PF00750 tRNA synthetases class I (R) N8E87_04075 PF03485 Arginyl tRNA synthetase N terminal domain N8E87_04075 PF05746 DALR anticodon binding domain N8E87_04080 PF06185 YecM protein N8E87_04085 PF03796 DnaB-like helicase C terminal domain N8E87_04085 PF00772 DnaB-like helicase N terminal domain N8E87_04090 PF00842 Alanine racemase, C-terminal domain N8E87_04090 PF01168 Alanine racemase, N-terminal domain N8E87_04095 PF00342 Phosphoglucose isomerase N8E87_04105 PF00717 Peptidase S24-like N8E87_04110 PF00375 Sodium:dicarboxylate symporter family N8E87_04115 PF13609 Gram-negative porin N8E87_04120 PF13609 Gram-negative porin N8E87_04125 PF13609 Gram-negative porin N8E87_04130 PF13649 Methyltransferase domain N8E87_04135 PF04221 RelB antitoxin N8E87_04140 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ N8E87_04145 PF00152 tRNA synthetases class II (D, K and N) N8E87_04145 PF01336 OB-fold nucleic acid binding domain N8E87_04145 PF02938 GAD domain N8E87_04170 PF00293 NUDIX domain N8E87_04175 PF01709 Transcriptional regulator N8E87_04180 PF02075 Crossover junction endodeoxyribonuclease RuvC N8E87_04185 PF07499 RuvA, C-terminal domain N8E87_04185 PF01330 RuvA N terminal domain N8E87_04190 PF05491 RuvB C-terminal winged helix domain N8E87_04190 PF05496 Holliday junction DNA helicase RuvB P-loop domain N8E87_04190 PF17864 RuvB AAA lid domain N8E87_04195 PF02595 Glycerate kinase family N8E87_04200 PF02447 GntP family permease N8E87_04205 PF05651 Putative sugar diacid recognition N8E87_04205 PF17853 GGDEF-like domain N8E87_04205 PF13556 PucR C-terminal helix-turn-helix domain N8E87_04210 PF00312 Ribosomal protein S15 N8E87_04215 PF00155 Aminotransferase class I and II N8E87_04220 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain N8E87_04220 PF02222 ATP-grasp domain N8E87_04225 PF00484 Carbonic anhydrase N8E87_04230 PF01384 Phosphate transporter family N8E87_04235 PF01865 Protein of unknown function DUF47 N8E87_04240 PF01928 CYTH domain N8E87_04245 PF18073 Rubredoxin metal binding domain N8E87_04250 PF02395 Immunoglobulin A1 protease N8E87_04250 PF03797 Autotransporter beta-domain N8E87_04250 PF03212 Pertactin N8E87_04260 PF02581 Thiamine monophosphate synthase N8E87_04265 PF08543 Phosphomethylpyrimidine kinase N8E87_04270 PF02110 Hydroxyethylthiazole kinase family N8E87_04275 PF03772 Competence protein N8E87_04275 PF13567 Domain of unknown function (DUF4131) N8E87_04275 PF00753 Metallo-beta-lactamase superfamily N8E87_04280 PF00664 ABC transporter transmembrane region N8E87_04280 PF00005 ABC transporter N8E87_04285 PF02606 Tetraacyldisaccharide-1-P 4'-kinase N8E87_04290 PF03966 Trm112p-like protein N8E87_04295 PF02348 Cytidylyltransferase N8E87_04300 PF09084 NMT1/THI5 like N8E87_04305 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_04310 PF00005 ABC transporter N8E87_04315 PF01541 GIY-YIG catalytic domain N8E87_04315 PF02151 UvrB/uvrC motif N8E87_04315 PF08459 UvrC Helix-hairpin-helix N-terminal N8E87_04335 PF09335 SNARE associated Golgi protein N8E87_04340 PF01386 Ribosomal L25p family N8E87_04345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N8E87_04345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N8E87_04350 PF01554 MatE N8E87_04355 PF00677 Lumazine binding domain N8E87_04365 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit N8E87_04370 PF12762 ISXO2-like transposase domain N8E87_04380 PF00925 GTP cyclohydrolase II N8E87_04385 PF01569 PAP2 superfamily N8E87_04390 PF00480 ROK family N8E87_04400 PF01235 Sodium:alanine symporter family N8E87_04415 PF02576 RimP N-terminal domain N8E87_04415 PF17384 RimP C-terminal SH3 domain N8E87_04420 PF00575 S1 RNA binding domain N8E87_04420 PF13184 NusA-like KH domain N8E87_04420 PF08529 NusA N-terminal domain N8E87_04425 PF00009 Elongation factor Tu GTP binding domain N8E87_04425 PF11987 Translation-initiation factor 2 N8E87_04425 PF04760 Translation initiation factor IF-2, N-terminal region N8E87_04430 PF02033 Ribosome-binding factor A N8E87_04435 PF01509 TruB family pseudouridylate synthase (N terminal domain) N8E87_04435 PF16198 tRNA pseudouridylate synthase B C-terminal domain N8E87_04435 PF09157 Pseudouridine synthase II TruB, C-terminal N8E87_04440 PF00330 Aconitase family (aconitate hydratase) N8E87_04440 PF06434 Aconitate hydratase 2 N-terminus N8E87_04440 PF11791 Aconitate B N-terminal domain N8E87_04445 PF03795 YCII-related domain N8E87_04450 PF03061 Thioesterase superfamily N8E87_04455 PF04279 Intracellular septation protein A N8E87_04465 PF03922 OmpW family N8E87_04470 PF00762 Ferrochelatase N8E87_04475 PF03061 Thioesterase superfamily N8E87_04480 PF02913 FAD linked oxidases, C-terminal domain N8E87_04480 PF01565 FAD binding domain N8E87_04480 PF13183 4Fe-4S dicluster domain N8E87_04485 PF00691 OmpA family N8E87_04485 PF01389 OmpA-like transmembrane domain N8E87_04490 PF04011 LemA family N8E87_04505 PF00462 Glutaredoxin N8E87_04535 PF08239 Bacterial SH3 domain N8E87_04540 PF12627 Probable RNA and SrmB- binding site of polymerase A N8E87_04540 PF01966 HD domain N8E87_04540 PF01743 Poly A polymerase head domain N8E87_04545 PF08942 Domain of unknown function (DUF1919) N8E87_04550 PF02682 Carboxyltransferase domain, subdomain C and D N8E87_04555 PF02626 Carboxyltransferase domain, subdomain A and B N8E87_04560 PF03746 LamB/YcsF family N8E87_04565 PF01566 Natural resistance-associated macrophage protein N8E87_04570 PF16325 Peptidase family U32 C-terminal domain N8E87_04570 PF01136 Peptidase family U32 N8E87_04575 PF13419 Haloacid dehalogenase-like hydrolase N8E87_04580 PF02219 Methylenetetrahydrofolate reductase N8E87_04590 PF03372 Endonuclease/Exonuclease/phosphatase family N8E87_04595 PF00072 Response regulator receiver domain N8E87_04595 PF00196 Bacterial regulatory proteins, luxR family N8E87_04605 PF01343 Peptidase family S49 N8E87_04605 PF08496 Peptidase family S49 N-terminal N8E87_04615 PF00149 Calcineurin-like phosphoesterase N8E87_04620 PF03477 ATP cone domain N8E87_04620 PF02867 Ribonucleotide reductase, barrel domain N8E87_04620 PF00317 Ribonucleotide reductase, all-alpha domain N8E87_04625 PF06965 Na+/H+ antiporter 1 N8E87_04630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N8E87_04635 PF00578 AhpC/TSA family N8E87_04640 PF13307 Helicase C-terminal domain N8E87_04640 PF06733 DEAD_2 N8E87_04645 PF00814 Glycoprotease family N8E87_04650 PF00501 AMP-binding enzyme N8E87_04650 PF13193 AMP-binding enzyme C-terminal domain N8E87_04655 PF01612 3'-5' exonuclease N8E87_04655 PF00570 HRDC domain N8E87_04670 PF00664 ABC transporter transmembrane region N8E87_04670 PF00005 ABC transporter N8E87_04675 PF00664 ABC transporter transmembrane region N8E87_04675 PF00005 ABC transporter N8E87_04680 PF07992 Pyridine nucleotide-disulphide oxidoreductase N8E87_04690 PF02447 GntP family permease N8E87_04695 PF01202 Shikimate kinase N8E87_04700 PF00005 ABC transporter N8E87_04700 PF12848 ABC transporter N8E87_04700 PF16326 ABC transporter C-terminal domain N8E87_04705 PF00209 Sodium:neurotransmitter symporter family N8E87_04710 PF00633 Helix-hairpin-helix motif N8E87_04710 PF00730 HhH-GPD superfamily base excision DNA repair protein N8E87_04710 PF10576 Iron-sulfur binding domain of endonuclease III N8E87_04715 PF02508 Rnf-Nqr subunit, membrane protein N8E87_04720 PF04205 FMN-binding domain N8E87_04725 PF03116 NQR2, RnfD, RnfE family N8E87_04730 PF13375 RnfC Barrel sandwich hybrid domain N8E87_04730 PF13237 4Fe-4S dicluster domain N8E87_04730 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit N8E87_04735 PF04060 Putative Fe-S cluster N8E87_04740 PF02508 Rnf-Nqr subunit, membrane protein N8E87_04745 PF01370 NAD dependent epimerase/dehydratase family N8E87_04745 PF08338 Domain of unknown function (DUF1731) N8E87_04750 PF02863 Arginine repressor, C-terminal domain N8E87_04750 PF01316 Arginine repressor, DNA binding domain N8E87_04755 PF00056 lactate/malate dehydrogenase, NAD binding domain N8E87_04755 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N8E87_04905 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system N8E87_04910 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin N8E87_05020 PF05840 Bacteriophage replication gene A protein (GPA) N8E87_05070 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) N8E87_05075 PF04865 Baseplate J-like protein N8E87_05080 PF07409 Phage protein GP46 N8E87_05100 PF07157 DNA circularisation protein N-terminus N8E87_05120 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 N8E87_05125 PF10618 Phage tail tube protein N8E87_05130 PF17482 Phage tail sheath C-terminal domain N8E87_05130 PF04984 Phage tail sheath protein subtilisin-like domain N8E87_05135 PF17482 Phage tail sheath C-terminal domain N8E87_05135 PF04984 Phage tail sheath protein subtilisin-like domain N8E87_05140 PF10948 Protein of unknown function (DUF2635) N8E87_05145 PF08873 Domain of unknown function (DUF1834) N8E87_05150 PF07030 Protein of unknown function (DUF1320) N8E87_05155 PF12949 HeH/LEM domain N8E87_05155 PF17891 Mu-like prophage FluMu N-terminal domain N8E87_05165 PF10123 Mu-like prophage I protein N8E87_05175 PF04233 Phage Mu protein F like protein N8E87_05180 PF06074 Protein of unknown function (DUF935) N8E87_05185 PF03237 Terminase-like family N8E87_05190 PF11985 Protein of unknown function (DUF3486) N8E87_05195 PF08461 Ribonuclease R winged-helix domain N8E87_05200 PF10805 Protein of unknown function (DUF2730) N8E87_05215 PF10841 Protein of unknown function (DUF2644) N8E87_05230 PF06252 Protein of unknown function (DUF1018) N8E87_05290 PF09039 Mu DNA binding, I gamma subdomain N8E87_05290 PF02316 Mu DNA-binding domain N8E87_05290 PF02914 Bacteriophage Mu transposase N8E87_05290 PF09299 Mu transposase, C-terminal N8E87_05295 PF13693 Winged helix-turn-helix DNA-binding N8E87_05305 PF12762 ISXO2-like transposase domain N8E87_05310 PF09313 Domain of unknown function (DUF1971) N8E87_05310 PF03848 Tellurite resistance protein TehB N8E87_05315 PF03477 ATP cone domain N8E87_05320 PF01872 RibD C-terminal domain N8E87_05320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N8E87_05325 PF13180 PDZ domain N8E87_05335 PF00809 Pterin binding enzyme N8E87_05340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N8E87_05340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N8E87_05340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N8E87_05340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N8E87_05345 PF00300 Histidine phosphatase superfamily (branch 1) N8E87_05355 PF03222 Tryptophan/tyrosine permease family N8E87_05360 PF00885 6,7-dimethyl-8-ribityllumazine synthase N8E87_05365 PF01029 NusB family N8E87_05370 PF02769 AIR synthase related protein, C-terminal domain N8E87_05370 PF00586 AIR synthase related protein, N-terminal domain N8E87_05375 PF04608 Phosphatidylglycerophosphatase A N8E87_05380 PF01810 LysE type translocator N8E87_05385 PF05173 Dihydrodipicolinate reductase, C-terminus N8E87_05385 PF01113 Dihydrodipicolinate reductase, N-terminus N8E87_05390 PF00111 2Fe-2S iron-sulfur cluster binding domain N8E87_05405 PF00268 Ribonucleotide reductase, small chain N8E87_05410 PF06295 Protein of unknown function (DUF1043) N8E87_05415 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding N8E87_05415 PF18381 YcaO cyclodehydratase C-terminal domain N8E87_05420 PF08241 Methyltransferase domain N8E87_05425 PF00753 Metallo-beta-lactamase superfamily N8E87_05425 PF16123 Hydroxyacylglutathione hydrolase C-terminus N8E87_05430 PF01488 Shikimate / quinate 5-dehydrogenase N8E87_05430 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain N8E87_05430 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain N8E87_05445 PF00883 Cytosol aminopeptidase family, catalytic domain N8E87_05445 PF02789 Cytosol aminopeptidase family, N-terminal domain N8E87_05450 PF03739 Lipopolysaccharide export system permease LptF/LptG N8E87_05455 PF03739 Lipopolysaccharide export system permease LptF/LptG N8E87_05460 PF05552 Conserved TM helix N8E87_05460 PF00924 Mechanosensitive ion channel N8E87_05465 PF07085 DRTGG domain N8E87_05465 PF01515 Phosphate acetyl/butaryl transferase N8E87_05470 PF00871 Acetokinase family N8E87_05475 PF04217 Protein of unknown function, DUF412 N8E87_05480 PF02674 Colicin V production protein N8E87_05485 PF00156 Phosphoribosyl transferase domain N8E87_05490 PF02441 Flavoprotein N8E87_05500 PF00731 AIR carboxylase N8E87_05505 PF11940 Domain of unknown function (DUF3458) Ig-like fold N8E87_05505 PF17432 Domain of unknown function (DUF3458_C) ARM repeats N8E87_05505 PF01433 Peptidase family M1 domain N8E87_05510 PF01180 Dihydroorotate dehydrogenase N8E87_05515 PF02811 PHP domain N8E87_05520 PF00793 DAHP synthetase I family N8E87_05525 PF01817 Chorismate mutase type II N8E87_05525 PF02153 Prephenate dehydrogenase N8E87_05535 PF04299 Putative FMN-binding domain N8E87_05540 PF03473 MOSC domain N8E87_05540 PF00111 2Fe-2S iron-sulfur cluster binding domain N8E87_05540 PF03476 MOSC N-terminal beta barrel domain N8E87_05545 PF03449 Transcription elongation factor, N-terminal N8E87_05545 PF01272 Transcription elongation factor, GreA/GreB, C-term N8E87_05550 PF01985 CRS1 / YhbY (CRM) domain N8E87_05555 PF13292 1-deoxy-D-xylulose-5-phosphate synthase N8E87_05555 PF02779 Transketolase, pyrimidine binding domain N8E87_05555 PF02780 Transketolase, C-terminal domain N8E87_05560 PF00348 Polyprenyl synthetase N8E87_05570 PF12762 ISXO2-like transposase domain N8E87_05575 PF02568 Thiamine biosynthesis protein (ThiI) N8E87_05575 PF02926 THUMP domain N8E87_05580 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N8E87_05585 PF12627 Probable RNA and SrmB- binding site of polymerase A N8E87_05585 PF01743 Poly A polymerase head domain N8E87_05585 PF12626 Polymerase A arginine-rich C-terminus N8E87_05590 PF01258 Prokaryotic dksA/traR C4-type zinc finger N8E87_05595 PF00171 Aldehyde dehydrogenase family N8E87_05600 PF00583 Acetyltransferase (GNAT) family N8E87_05600 PF00696 Amino acid kinase family N8E87_05605 PF00462 Glutaredoxin N8E87_05610 PF08443 RimK-like ATP-grasp domain N8E87_05610 PF18030 RimK PreATP-grasp domain N8E87_05615 PF05728 Uncharacterised protein family (UPF0227) N8E87_05620 PF16036 Chalcone isomerase-like N8E87_05625 PF02657 Fe-S metabolism associated domain N8E87_05630 PF00266 Aminotransferase class-V N8E87_05635 PF00565 Staphylococcal nuclease homologue N8E87_05640 PF03788 LrgA family N8E87_05645 PF04172 LrgB-like family N8E87_05650 PF13286 Phosphohydrolase-associated domain N8E87_05650 PF01966 HD domain N8E87_05655 PF01037 Lrp/AsnC ligand binding domain N8E87_05660 PF13491 4TM region of DNA translocase FtsK/SpoIIIE N8E87_05660 PF17854 FtsK alpha domain N8E87_05660 PF09397 Ftsk gamma domain N8E87_05660 PF01580 FtsK/SpoIIIE family N8E87_05665 PF03548 Outer membrane lipoprotein carrier protein LolA N8E87_05670 PF01381 Helix-turn-helix N8E87_05675 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB N8E87_05680 PF16193 AAA C-terminal domain N8E87_05680 PF12002 MgsA AAA+ ATPase C terminal N8E87_05680 PF00004 ATPase family associated with various cellular activities (AAA) N8E87_05685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N8E87_05685 PF02403 Seryl-tRNA synthetase N-terminal domain N8E87_05690 PF03462 PCRF domain N8E87_05690 PF00472 RF-1 domain N8E87_05705 PF00929 Exonuclease N8E87_05710 PF03193 RsgA GTPase N8E87_05715 PF00381 PTS HPr component phosphorylation site N8E87_05720 PF05524 PEP-utilising enzyme, N-terminal N8E87_05720 PF00391 PEP-utilising enzyme, mobile domain N8E87_05720 PF02896 PEP-utilising enzyme, TIM barrel domain N8E87_05725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N8E87_05730 PF00456 Transketolase, thiamine diphosphate binding domain N8E87_05730 PF17831 Pyruvate dehydrogenase E1 component middle domain N8E87_05735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N8E87_05735 PF00364 Biotin-requiring enzyme N8E87_05735 PF02817 e3 binding domain N8E87_05740 PF07992 Pyridine nucleotide-disulphide oxidoreductase N8E87_05740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N8E87_05750 PF02321 Outer membrane efflux protein N8E87_05755 PF00005 ABC transporter N8E87_05755 PF12704 MacB-like periplasmic core domain N8E87_05755 PF02687 FtsX-like permease family N8E87_05760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N8E87_05765 PF00749 tRNA synthetases class I (E and Q), catalytic domain N8E87_05765 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain N8E87_05775 PF05656 Protein of unknown function (DUF805) N8E87_05780 PF02446 4-alpha-glucanotransferase N8E87_05785 PF00128 Alpha amylase, catalytic domain N8E87_05785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N8E87_05785 PF02806 Alpha amylase, C-terminal all-beta domain N8E87_05790 PF00128 Alpha amylase, catalytic domain N8E87_05790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N8E87_05790 PF18390 Glycogen debranching enzyme C-terminal domain N8E87_05795 PF00483 Nucleotidyl transferase N8E87_05800 PF08323 Starch synthase catalytic domain N8E87_05800 PF00534 Glycosyl transferases group 1 N8E87_05805 PF00343 Carbohydrate phosphorylase N8E87_05810 PF00817 impB/mucB/samB family N8E87_05810 PF11798 IMS family HHH motif N8E87_05815 PF01435 Peptidase family M48 N8E87_05825 PF04315 Elongation factor P hydroxylase N8E87_05830 PF00005 ABC transporter N8E87_05835 PF01061 ABC-2 type transporter N8E87_05840 PF00535 Glycosyl transferase family 2 N8E87_05850 PF08681 Protein of unknown function (DUF1778) N8E87_05855 PF11892 Domain of unknown function (DUF3412) N8E87_05855 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases N8E87_05855 PF03641 Possible lysine decarboxylase N8E87_05860 PF14489 QueF-like protein N8E87_05860 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term N8E87_05865 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) N8E87_05870 PF04287 tRNA pseudouridine synthase C N8E87_05875 PF00849 RNA pseudouridylate synthase N8E87_05880 PF00572 Ribosomal protein L13 N8E87_05885 PF00380 Ribosomal protein S9/S16 N8E87_05890 PF00043 Glutathione S-transferase, C-terminal domain N8E87_05890 PF13417 Glutathione S-transferase, N-terminal domain N8E87_05895 PF04386 Stringent starvation protein B N8E87_05905 PF00263 Bacterial type II and III secretion system protein N8E87_05905 PF03958 Bacterial type II/III secretion system short domain N8E87_05985 PF08411 Exonuclease C-terminal N8E87_05985 PF00929 Exonuclease N8E87_05995 PF04310 MukB N-terminal N8E87_05995 PF16330 MukB hinge domain N8E87_06000 PF04288 MukE-like family N8E87_06005 PF17192 MukF middle domain N8E87_06005 PF17193 MukF C-terminal domain N8E87_06005 PF03882 MukF winged-helix domain N8E87_06010 PF01171 PP-loop family N8E87_06015 PF09556 HaeIII restriction endonuclease N8E87_06020 PF00145 C-5 cytosine-specific DNA methylase N8E87_06025 PF00877 NlpC/P60 family N8E87_06030 PF00216 Bacterial DNA-binding protein N8E87_06035 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain N8E87_06035 PF01588 Putative tRNA binding domain N8E87_06035 PF03147 Ferredoxin-fold anticodon binding domain N8E87_06035 PF03484 tRNA synthetase B5 domain N8E87_06035 PF03483 B3/4 domain N8E87_06040 PF01409 tRNA synthetases class II core domain (F) N8E87_06040 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain N8E87_06045 PF00849 RNA pseudouridylate synthase N8E87_06050 PF13091 PLD-like domain N8E87_06050 PF13396 Phospholipase_D-nuclease N-terminal N8E87_06055 PF00106 short chain dehydrogenase N8E87_06055 PF00300 Histidine phosphatase superfamily (branch 1) N8E87_06060 PF01842 ACT domain N8E87_06060 PF00551 Formyl transferase N8E87_06070 PF01047 MarR family N8E87_06070 PF00480 ROK family N8E87_06075 PF00152 tRNA synthetases class II (D, K and N) N8E87_06075 PF01336 OB-fold nucleic acid binding domain N8E87_06080 PF05662 Coiled stalk of trimeric autotransporter adhesin N8E87_06080 PF03895 YadA-like membrane anchor domain N8E87_06080 PF13018 Extended Signal Peptide of Type V secretion system N8E87_06080 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin N8E87_06085 PF13538 UvrD-like helicase C-terminal domain N8E87_06090 PF12705 PD-(D/E)XK nuclease superfamily N8E87_06090 PF00580 UvrD/REP helicase N-terminal domain N8E87_06090 PF13361 UvrD-like helicase C-terminal domain N8E87_06095 PF02635 DsrE/DsrF-like family N8E87_06100 PF00860 Permease family N8E87_06110 PF04073 Aminoacyl-tRNA editing domain N8E87_06115 PF07977 FabA-like domain N8E87_06120 PF05362 Lon protease (S16) C-terminal proteolytic domain N8E87_06120 PF13654 AAA domain N8E87_06130 PF06303 MatP N-terminal domain N8E87_06130 PF17414 MatP C-terminal ribbon-helix-helix domain N8E87_06135 PF00586 AIR synthase related protein, N-terminal domain N8E87_06135 PF02769 AIR synthase related protein, C-terminal domain N8E87_06140 PF00356 Bacterial regulatory proteins, lacI family N8E87_06140 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N8E87_06155 PF00313 'Cold-shock' DNA-binding domain N8E87_06160 PF03701 Uncharacterised protein family (UPF0181) N8E87_06165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N8E87_06165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N8E87_06170 PF08245 Mur ligase middle domain N8E87_06175 PF01039 Carboxyl transferase domain N8E87_06175 PF17848 Acetyl-coA carboxylase zinc finger domain N8E87_06180 PF01416 tRNA pseudouridine synthase N8E87_06190 PF01713 Smr domain N8E87_06195 PF05175 Methyltransferase small domain N8E87_06205 PF00571 CBS domain N8E87_06205 PF01380 SIS domain N8E87_06220 PF00589 Phage integrase family N8E87_06255 PF09039 Mu DNA binding, I gamma subdomain N8E87_06255 PF09299 Mu transposase, C-terminal N8E87_06255 PF02914 Bacteriophage Mu transposase N8E87_06255 PF02316 Mu DNA-binding domain N8E87_06260 PF09077 Mu B transposition protein, C terminal N8E87_06260 PF13401 AAA domain N8E87_06320 PF06252 Protein of unknown function (DUF1018) N8E87_06325 PF08765 Mor transcription activator family N8E87_06330 PF01510 N-acetylmuramoyl-L-alanine amidase N8E87_06335 PF10841 Protein of unknown function (DUF2644) N8E87_06350 PF10805 Protein of unknown function (DUF2730) N8E87_06355 PF08461 Ribonuclease R winged-helix domain N8E87_06360 PF11985 Protein of unknown function (DUF3486) N8E87_06365 PF03237 Terminase-like family N8E87_06375 PF04233 Phage Mu protein F like protein N8E87_06390 PF10124 Mu-like prophage major head subunit gpT N8E87_06395 PF17891 Mu-like prophage FluMu N-terminal domain N8E87_06395 PF12949 HeH/LEM domain N8E87_06400 PF07030 Protein of unknown function (DUF1320) N8E87_06405 PF08873 Domain of unknown function (DUF1834) N8E87_06410 PF10948 Protein of unknown function (DUF2635) N8E87_06415 PF17482 Phage tail sheath C-terminal domain N8E87_06415 PF04984 Phage tail sheath protein subtilisin-like domain N8E87_06425 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 N8E87_06440 PF07157 DNA circularisation protein N-terminus N8E87_06455 PF06890 Bacteriophage Mu Gp45 protein N8E87_06460 PF07409 Phage protein GP46 N8E87_06470 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) N8E87_06515 PF12592 Protein of unknown function (DUF3763) N8E87_06515 PF17868 AAA lid domain N8E87_06515 PF07728 AAA domain (dynein-related subfamily) N8E87_06540 PF03129 Anticodon binding domain N8E87_06540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N8E87_06540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N8E87_06540 PF02824 TGS domain N8E87_06545 PF13417 Glutathione S-transferase, N-terminal domain N8E87_06545 PF04399 Glutaredoxin 2, C terminal domain N8E87_06550 PF03881 Fructosamine kinase N8E87_06560 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) N8E87_06565 PF00534 Glycosyl transferases group 1 N8E87_06565 PF13439 Glycosyltransferase Family 4 N8E87_06570 PF17757 UvrB interaction domain N8E87_06570 PF02151 UvrB/uvrC motif N8E87_06570 PF00271 Helicase conserved C-terminal domain N8E87_06570 PF12344 Ultra-violet resistance protein B N8E87_06570 PF04851 Type III restriction enzyme, res subunit N8E87_06580 PF01699 Sodium/calcium exchanger protein N8E87_06585 PF03824 High-affinity nickel-transport protein N8E87_06590 PF06226 Protein of unknown function (DUF1007) N8E87_06595 PF00005 ABC transporter N8E87_06595 PF12848 ABC transporter N8E87_06600 PF07687 Peptidase dimerisation domain N8E87_06600 PF01546 Peptidase family M20/M25/M40 N8E87_06610 PF00356 Bacterial regulatory proteins, lacI family N8E87_06615 PF00294 pfkB family carbohydrate kinase N8E87_06620 PF01773 Na+ dependent nucleoside transporter N-terminus N8E87_06620 PF07670 Nucleoside recognition N8E87_06620 PF07662 Na+ dependent nucleoside transporter C-terminus N8E87_06625 PF01156 Inosine-uridine preferring nucleoside hydrolase N8E87_06630 PF00595 PDZ domain N8E87_06635 PF01027 Inhibitor of apoptosis-promoting Bax1 N8E87_06640 PF04358 DsrC like protein N8E87_06650 PF00005 ABC transporter N8E87_06655 PF00950 ABC 3 transport family N8E87_06660 PF00950 ABC 3 transport family N8E87_06665 PF00561 alpha/beta hydrolase fold N8E87_06670 PF02698 DUF218 domain N8E87_06675 PF00356 Bacterial regulatory proteins, lacI family N8E87_06675 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N8E87_06680 PF00793 DAHP synthetase I family N8E87_06685 PF02687 FtsX-like permease family N8E87_06685 PF12704 MacB-like periplasmic core domain N8E87_06690 PF00005 ABC transporter N8E87_06695 PF02687 FtsX-like permease family N8E87_06695 PF12704 MacB-like periplasmic core domain N8E87_06700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N8E87_06700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N8E87_06705 PF00793 DAHP synthetase I family N8E87_06710 PF13369 Transglutaminase-like superfamily N8E87_06715 PF13847 Methyltransferase domain N8E87_06715 PF17827 PrmC N-terminal domain N8E87_06720 PF00004 ATPase family associated with various cellular activities (AAA) N8E87_06720 PF06480 FtsH Extracellular N8E87_06720 PF01434 Peptidase family M41 N8E87_06720 PF17862 AAA+ lid domain N8E87_06725 PF01728 FtsJ-like methyltransferase N8E87_06730 PF12805 FUSC-like inner membrane protein yccS N8E87_06735 PF02142 MGS-like domain N8E87_06740 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N8E87_06745 PF02391 MoaE protein N8E87_06750 PF02597 ThiS family N8E87_06755 PF01967 MoaC family N8E87_06760 PF06463 Molybdenum Cofactor Synthesis C N8E87_06760 PF04055 Radical SAM superfamily N8E87_06765 PF01933 Uncharacterised protein family UPF0052 N8E87_06775 PF13953 PapC C-terminal domain N8E87_06775 PF13954 PapC N-terminal domain N8E87_06775 PF00577 Outer membrane usher protein N8E87_06780 PF02753 Pili assembly chaperone PapD, C-terminal domain N8E87_06780 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain N8E87_06805 PF03062 MBOAT, membrane-bound O-acyltransferase family N8E87_06810 PF01227 GTP cyclohydrolase I N8E87_06815 PF00994 Probable molybdopterin binding domain N8E87_06815 PF03454 MoeA C-terminal region (domain IV) N8E87_06815 PF03453 MoeA N-terminal region (domain I and II) N8E87_06820 PF00899 ThiF family N8E87_06825 PF03956 Lysine exporter LysO N8E87_06830 PF00210 Ferritin-like domain N8E87_06835 PF00210 Ferritin-like domain N8E87_06845 PF00027 Cyclic nucleotide-binding domain N8E87_06845 PF13545 Crp-like helix-turn-helix domain N8E87_06850 PF00582 Universal stress protein family N8E87_06855 PF00691 OmpA family N8E87_06860 PF00132 Bacterial transferase hexapeptide (six repeats) N8E87_06860 PF14602 Hexapeptide repeat of succinyl-transferase N8E87_06860 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal N8E87_06865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E87_06865 PF03466 LysR substrate binding domain N8E87_06870 PF00849 RNA pseudouridylate synthase N8E87_06870 PF01479 S4 domain N8E87_06875 PF01300 Telomere recombination N8E87_06880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N8E87_06885 PF04348 LppC putative lipoprotein N8E87_06890 PF02021 Uncharacterised protein family UPF0102 N8E87_06895 PF13580 SIS domain N8E87_06900 PF04972 BON domain N8E87_06905 PF00580 UvrD/REP helicase N-terminal domain N8E87_06905 PF13361 UvrD-like helicase C-terminal domain N8E87_06920 PF01728 FtsJ-like methyltransferase N8E87_06920 PF18125 RlmM ferredoxin-like domain N8E87_06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E87_06925 PF03466 LysR substrate binding domain N8E87_06930 PF01063 Amino-transferase class IV N8E87_06935 PF05662 Coiled stalk of trimeric autotransporter adhesin N8E87_06935 PF13018 Extended Signal Peptide of Type V secretion system N8E87_06935 PF03895 YadA-like membrane anchor domain N8E87_06935 PF05658 Head domain of trimeric autotransporter adhesin N8E87_07030 PF03592 Terminase small subunit N8E87_07085 PF00589 Phage integrase family N8E87_07085 PF13356 Arm DNA-binding domain N8E87_07095 PF03840 Preprotein translocase SecG subunit N8E87_07100 PF01131 DNA topoisomerase N8E87_07100 PF01751 Toprim domain N8E87_07105 PF02575 YbaB/EbfC DNA-binding family N8E87_07110 PF02132 RecR protein N8E87_07110 PF13662 Toprim domain N8E87_07115 PF01053 Cys/Met metabolism PLP-dependent enzyme N8E87_07120 PF10417 C-terminal domain of 1-Cys peroxiredoxin N8E87_07120 PF00578 AhpC/TSA family N8E87_07125 PF05166 YcgL domain N8E87_07130 PF01467 Cytidylyltransferase-like N8E87_07130 PF00294 pfkB family carbohydrate kinase N8E87_07135 PF03279 Bacterial lipid A biosynthesis acyltransferase N8E87_07140 PF00753 Metallo-beta-lactamase superfamily N8E87_07145 PF05951 Bacterial protein of unknown function (DUF882) N8E87_07150 PF03734 L,D-transpeptidase catalytic domain N8E87_07155 PF17804 Tail specific protease N-terminal domain N8E87_07155 PF03572 Peptidase family S41 N8E87_07155 PF00595 PDZ domain N8E87_07155 PF11818 C-terminal domain of tail specific protease (DUF3340) N8E87_07160 PF04352 ProQ/FINO family N8E87_07160 PF17516 ProQ C-terminal domain N8E87_07165 PF04403 Paraquat-inducible protein A N8E87_07170 PF02470 MlaD protein N8E87_07175 PF00986 DNA gyrase B subunit, carboxyl terminus N8E87_07175 PF00204 DNA gyrase B N8E87_07175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E87_07175 PF01751 Toprim domain N8E87_07180 PF07732 Multicopper oxidase N8E87_07185 PF03989 DNA gyrase C-terminal domain, beta-propeller N8E87_07185 PF00521 DNA gyrase/topoisomerase IV, subunit A N8E87_07190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N8E87_07190 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region N8E87_07195 PF11230 Protein of unknown function (DUF3029) N8E87_07200 PF04055 Radical SAM superfamily N8E87_07205 PF03783 Curli production assembly/transport component CsgG N8E87_07215 PF05643 Putative bacterial lipoprotein (DUF799) N8E87_07220 PF01396 Topoisomerase DNA binding C4 zinc finger N8E87_07220 PF08272 Topoisomerase I zinc-ribbon-like N8E87_07220 PF01131 DNA topoisomerase N8E87_07220 PF01751 Toprim domain N8E87_07225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E87_07225 PF03466 LysR substrate binding domain N8E87_07230 PF01343 Peptidase family S49 N8E87_07235 PF00881 Nitroreductase family N8E87_07240 PF02678 Pirin N8E87_07240 PF05726 Pirin C-terminal cupin domain N8E87_07245 PF05979 Bacterial protein of unknown function (DUF896) N8E87_07250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E87_07250 PF03466 LysR substrate binding domain N8E87_07255 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N8E87_07255 PF00056 lactate/malate dehydrogenase, NAD binding domain N8E87_07260 PF10369 Small subunit of acetolactate synthase N8E87_07265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N8E87_07265 PF00205 Thiamine pyrophosphate enzyme, central domain N8E87_07265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N8E87_07270 PF03553 Na+/H+ antiporter family N8E87_07275 PF00816 H-NS histone family N8E87_07280 PF08206 Ribonuclease B OB domain N8E87_07280 PF00773 RNB domain N8E87_07280 PF00575 S1 RNA binding domain N8E87_07290 PF01784 NIF3 (NGG1p interacting factor 3) N8E87_07295 PF00356 Bacterial regulatory proteins, lacI family N8E87_07300 PF00311 Phosphoenolpyruvate carboxylase N8E87_07305 PF04055 Radical SAM superfamily N8E87_07305 PF01938 TRAM domain N8E87_07305 PF00919 Uncharacterized protein family UPF0004 N8E87_07310 PF01494 FAD binding domain N8E87_07315 PF00149 Calcineurin-like phosphoesterase N8E87_07320 PF00293 NUDIX domain N8E87_07325 PF06146 Phosphate-starvation-inducible E N8E87_07330 PF02557 D-alanyl-D-alanine carboxypeptidase N8E87_07335 PF01546 Peptidase family M20/M25/M40 N8E87_07335 PF07687 Peptidase dimerisation domain N8E87_07340 PF03960 ArsC family N8E87_07345 PF02086 D12 class N6 adenine-specific DNA methyltransferase N8E87_07350 PF05315 ICEA Protein N8E87_07355 PF01555 DNA methylase N8E87_07360 PF00291 Pyridoxal-phosphate dependent enzyme N8E87_07360 PF14821 Threonine synthase N terminus N8E87_07365 PF08544 GHMP kinases C terminal N8E87_07365 PF00288 GHMP kinases N terminal domain N8E87_07370 PF00696 Amino acid kinase family N8E87_07370 PF01842 ACT domain N8E87_07370 PF13840 ACT domain N8E87_07370 PF00742 Homoserine dehydrogenase N8E87_07370 PF03447 Homoserine dehydrogenase, NAD binding domain N8E87_07375 PF01168 Alanine racemase, N-terminal domain N8E87_07385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N8E87_07390 PF00929 Exonuclease N8E87_07395 PF13726 Na+-H+ antiporter family N8E87_07395 PF03553 Na+/H+ antiporter family N8E87_07400 PF01619 Proline dehydrogenase N8E87_07400 PF14850 DNA-binding domain of Proline dehydrogenase N8E87_07400 PF18327 Proline utilization A proline dehydrogenase N-terminal domain N8E87_07400 PF00171 Aldehyde dehydrogenase family N8E87_07405 PF00474 Sodium:solute symporter family N8E87_07410 PF02547 Queuosine biosynthesis protein N8E87_07415 PF01702 Queuine tRNA-ribosyltransferase N8E87_07420 PF01814 Hemerythrin HHE cation binding domain N8E87_07430 PF02699 Preprotein translocase subunit N8E87_07435 PF07549 SecD/SecF GG Motif N8E87_07435 PF13721 SecD export protein N-terminal TM region N8E87_07435 PF02355 Protein export membrane protein N8E87_07440 PF07549 SecD/SecF GG Motif N8E87_07440 PF02355 Protein export membrane protein N8E87_07445 PF14718 Soluble lytic murein transglycosylase L domain N8E87_07445 PF01464 Transglycosylase SLT domain N8E87_07450 PF01371 Trp repressor protein N8E87_07455 PF00912 Transglycosylase N8E87_07460 PF00106 short chain dehydrogenase N8E87_07465 PF12832 MFS_1 like family N8E87_07480 PF13332 Hemagglutinin repeat N8E87_07480 PF04829 Pre-toxin domain with VENN motif N8E87_07480 PF15526 Novel toxin 21 N8E87_07480 PF05860 haemagglutination activity domain N8E87_07480 PF05594 Haemagluttinin repeat N8E87_07490 PF13332 Hemagglutinin repeat N8E87_07490 PF05860 haemagglutination activity domain N8E87_07490 PF04829 Pre-toxin domain with VENN motif N8E87_07520 PF13018 Extended Signal Peptide of Type V secretion system N8E87_07520 PF13332 Hemagglutinin repeat N8E87_07520 PF05860 haemagglutination activity domain N8E87_07520 PF04829 Pre-toxin domain with VENN motif N8E87_07540 PF01555 DNA methylase N8E87_07540 PF18273 Type III R-M EcoP15I C-terminal domain N8E87_07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E87_07550 PF03466 LysR substrate binding domain N8E87_07555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E87_07555 PF08521 Two-component sensor kinase N-terminal N8E87_07555 PF00512 His Kinase A (phospho-acceptor) domain N8E87_07560 PF00486 Transcriptional regulatory protein, C terminal N8E87_07560 PF00072 Response regulator receiver domain N8E87_07565 PF03070 TENA/THI-4/PQQC family N8E87_07590 PF02233 NAD(P) transhydrogenase beta subunit N8E87_07595 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N8E87_07595 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N8E87_07595 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch N8E87_07600 PF17746 SfsA N-terminal OB domain N8E87_07600 PF03749 Sugar fermentation stimulation protein RE domain N8E87_07605 PF02311 AraC-like ligand binding domain N8E87_07605 PF12833 Helix-turn-helix domain N8E87_07610 PF12706 Beta-lactamase superfamily domain N8E87_07615 PF18649 EcpB C-terminal domain N8E87_07620 PF16449 Fimbrillin MatB N8E87_07625 PF07690 Major Facilitator Superfamily N8E87_07630 PF02909 Tetracyclin repressor-like, C-terminal domain N8E87_07630 PF00440 Bacterial regulatory proteins, tetR family N8E87_07655 PF16347 Domain of unknown function (DUF4976) N8E87_07655 PF00884 Sulfatase N8E87_07665 PF03102 NeuB family N8E87_07665 PF08666 SAF domain N8E87_07670 PF02348 Cytidylyltransferase N8E87_07670 PF13472 GDSL-like Lipase/Acylhydrolase family N8E87_07675 PF02350 UDP-N-acetylglucosamine 2-epimerase N8E87_07680 PF01479 S4 domain N8E87_07680 PF00579 tRNA synthetases class I (W and Y) N8E87_07685 PF00294 pfkB family carbohydrate kinase N8E87_07690 PF08244 Glycosyl hydrolases family 32 C terminal N8E87_07690 PF00251 Glycosyl hydrolases family 32 N-terminal domain N8E87_07705 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE N8E87_07710 PF01520 N-acetylmuramoyl-L-alanine amidase N8E87_07710 PF01476 LysM domain N8E87_07715 PF01119 DNA mismatch repair protein, C-terminal domain N8E87_07715 PF08676 MutL C terminal dimerisation domain N8E87_07725 PF17209 Hfq protein N8E87_07730 PF16360 GTP-binding GTPase Middle Region N8E87_07730 PF13167 GTP-binding GTPase N-terminal N8E87_07730 PF01926 50S ribosome-binding GTPase N8E87_07735 PF00860 Permease family N8E87_07740 PF04269 Protein of unknown function, DUF440 N8E87_07755 PF00657 GDSL-like Lipase/Acylhydrolase N8E87_07755 PF03797 Autotransporter beta-domain N8E87_07765 PF07445 Primosomal replication protein priC N8E87_07770 PF02678 Pirin N8E87_07770 PF17954 Quercetinase C-terminal cupin domain N8E87_07775 PF13406 Transglycosylase SLT domain N8E87_07780 PF00535 Glycosyl transferase family 2 N8E87_07785 PF00535 Glycosyl transferase family 2 N8E87_07795 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) N8E87_07805 PF04230 Polysaccharide pyruvyl transferase N8E87_07810 PF02698 DUF218 domain N8E87_07815 PF00109 Beta-ketoacyl synthase, N-terminal domain N8E87_07815 PF02801 Beta-ketoacyl synthase, C-terminal domain N8E87_07820 PF05430 S-adenosyl-L-methionine-dependent methyltransferase N8E87_07820 PF01266 FAD dependent oxidoreductase N8E87_07825 PF01588 Putative tRNA binding domain N8E87_07825 PF09334 tRNA synthetases class I (M) N8E87_07830 PF10609 NUBPL iron-transfer P-loop NTPase N8E87_07835 PF03239 Iron permease FTR1 family N8E87_07840 PF10634 Fe2+ transport protein N8E87_07850 PF12704 MacB-like periplasmic core domain N8E87_07850 PF02687 FtsX-like permease family N8E87_07850 PF00005 ABC transporter N8E87_07860 PF00005 ABC transporter N8E87_07865 PF01263 Aldose 1-epimerase N8E87_07875 PF01336 OB-fold nucleic acid binding domain N8E87_07875 PF00152 tRNA synthetases class II (D, K and N) N8E87_07880 PF02661 Fic/DOC family N8E87_07880 PF12728 Helix-turn-helix domain N8E87_07890 PF13098 Thioredoxin-like domain N8E87_07890 PF10411 Disulfide bond isomerase protein N-terminus N8E87_07895 PF01368 DHH family N8E87_07895 PF02272 DHHA1 domain N8E87_07895 PF17768 RecJ OB domain N8E87_07900 PF01048 Phosphorylase superfamily N8E87_07905 PF00691 OmpA family N8E87_07905 PF01389 OmpA-like transmembrane domain N8E87_07910 PF03831 PhnA domain N8E87_07910 PF08274 PhnA Zinc-Ribbon N8E87_07915 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) N8E87_07920 PF00005 ABC transporter N8E87_07930 PF01032 FecCD transport family N8E87_07935 PF10670 Domain of unknown function (DUF4198) N8E87_07940 PF07715 TonB-dependent Receptor Plug Domain N8E87_07940 PF00593 TonB dependent receptor N8E87_07945 PF07715 TonB-dependent Receptor Plug Domain N8E87_07945 PF00593 TonB dependent receptor N8E87_07950 PF03313 Serine dehydratase alpha chain N8E87_07960 PF13309 HTH domain N8E87_07960 PF08348 YheO-like PAS domain N8E87_07970 PF02887 Pyruvate kinase, alpha/beta domain N8E87_07970 PF00224 Pyruvate kinase, barrel domain N8E87_07975 PF00881 Nitroreductase family N8E87_07980 PF08543 Phosphomethylpyrimidine kinase N8E87_07985 PF01171 PP-loop family N8E87_07985 PF09179 TilS substrate binding domain N8E87_07985 PF11734 TilS substrate C-terminal domain N8E87_07990 PF00549 CoA-ligase N8E87_07990 PF02629 CoA binding domain N8E87_07995 PF00549 CoA-ligase N8E87_07995 PF08442 ATP-grasp domain N8E87_08000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N8E87_08000 PF00364 Biotin-requiring enzyme N8E87_08000 PF02817 e3 binding domain N8E87_08005 PF02779 Transketolase, pyrimidine binding domain N8E87_08005 PF16870 2-oxoglutarate dehydrogenase C-terminal N8E87_08005 PF00676 Dehydrogenase E1 component N8E87_08005 PF16078 2-oxoglutarate dehydrogenase N-terminus N8E87_08010 PF00285 Citrate synthase, C-terminal domain N8E87_08020 PF02525 Flavodoxin-like fold N8E87_08030 PF01145 SPFH domain / Band 7 family N8E87_08030 PF16200 C-terminal region of band_7 N8E87_08060 PF01047 MarR family N8E87_08060 PF00480 ROK family N8E87_08065 PF01025 GrpE N8E87_08070 PF01513 ATP-NAD kinase N8E87_08075 PF02463 RecF/RecN/SMC N terminal domain N8E87_08080 PF01250 Ribosomal protein S6 N8E87_08085 PF00436 Single-strand binding protein family N8E87_08090 PF01084 Ribosomal protein S18 N8E87_08095 PF03948 Ribosomal protein L9, C-terminal domain N8E87_08095 PF01281 Ribosomal protein L9, N-terminal domain N8E87_08100 PF00202 Aminotransferase class-III N8E87_08105 PF01523 Putative modulator of DNA gyrase N8E87_08110 PF10150 Ribonuclease E/G family N8E87_08110 PF00575 S1 RNA binding domain N8E87_08115 PF08003 Protein of unknown function (DUF1698) N8E87_08170 PF00953 Glycosyl transferase family 4 N8E87_08175 PF00202 Aminotransferase class-III N8E87_08180 PF01966 HD domain N8E87_08180 PF08335 GlnD PII-uridylyltransferase N8E87_08185 PF00557 Metallopeptidase family M24 N8E87_08190 PF01521 Iron-sulphur cluster biosynthesis N8E87_08195 PF06062 Uncharacterised protein family (UPF0231) N8E87_08200 PF00912 Transglycosylase N8E87_08200 PF00905 Penicillin binding protein transpeptidase domain N8E87_08200 PF14814 Bifunctional transglycosylase second domain N8E87_08210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N8E87_08215 PF04304 Protein of unknown function (DUF454) N8E87_08220 PF01432 Peptidase family M3 N8E87_08225 PF00152 tRNA synthetases class II (D, K and N) N8E87_08230 PF00890 FAD binding domain N8E87_08230 PF02910 Fumarate reductase flavoprotein C-term N8E87_08235 PF13085 2Fe-2S iron-sulfur cluster binding domain N8E87_08235 PF13183 4Fe-4S dicluster domain N8E87_08240 PF02300 Fumarate reductase subunit C N8E87_08245 PF02313 Fumarate reductase subunit D N8E87_08250 PF10672 S-adenosylmethionine-dependent methyltransferase N8E87_08250 PF02926 THUMP domain N8E87_08250 PF01170 Putative RNA methylase family UPF0020 N8E87_08255 PF01297 Zinc-uptake complex component A periplasmic N8E87_08260 PF00899 ThiF family N8E87_08265 PF06725 3D domain N8E87_08265 PF03562 MltA specific insert domain N8E87_08275 PF00313 'Cold-shock' DNA-binding domain N8E87_08280 PF02875 Mur ligase family, glutamate ligase domain N8E87_08280 PF08245 Mur ligase middle domain N8E87_08280 PF01225 Mur ligase family, catalytic domain N8E87_08285 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain N8E87_08290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N8E87_08295 PF01722 BolA-like protein N8E87_08300 PF13466 STAS domain N8E87_08305 PF05494 MlaC protein N8E87_08310 PF02470 MlaD protein N8E87_08315 PF02405 Permease MlaE N8E87_08330 PF06835 Lipopolysaccharide-assembly, LptC-related N8E87_08335 PF03968 OstA-like protein N8E87_08340 PF00005 ABC transporter N8E87_08340 PF12399 Branched-chain amino acid ATP-binding cassette transporter N8E87_08345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N8E87_08350 PF03668 P-loop ATPase protein family N8E87_08355 PF03786 D-mannonate dehydratase (UxuA) N8E87_08360 PF07729 FCD domain N8E87_08360 PF00392 Bacterial regulatory proteins, gntR family N8E87_08365 PF16338 Domain of unknown function (DUF4968) N8E87_08365 PF13802 Galactose mutarotase-like N8E87_08365 PF01055 Glycosyl hydrolases family 31 N8E87_08365 PF17137 Domain of unknown function (DUF5110) N8E87_08370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N8E87_08375 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N8E87_08385 PF03480 Bacterial extracellular solute-binding protein, family 7 N8E87_08390 PF00106 short chain dehydrogenase N8E87_08395 PF02614 Glucuronate isomerase N8E87_08405 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N8E87_08410 PF00155 Aminotransferase class I and II N8E87_08415 PF00266 Aminotransferase class-V N8E87_08420 PF04363 Protein of unknown function (DUF496) N8E87_08425 PF03895 YadA-like membrane anchor domain N8E87_08425 PF13018 Extended Signal Peptide of Type V secretion system N8E87_08425 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin N8E87_08425 PF05662 Coiled stalk of trimeric autotransporter adhesin N8E87_08435 PF00367 phosphotransferase system, EIIB N8E87_08435 PF02378 Phosphotransferase system, EIIC N8E87_08440 PF05191 Adenylate kinase, active site lid N8E87_08445 PF00561 alpha/beta hydrolase fold N8E87_08450 PF16582 Middle domain of thiamine pyrophosphate N8E87_08450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N8E87_08450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N8E87_08455 PF00425 chorismate binding enzyme N8E87_08460 PF00155 Aminotransferase class I and II N8E87_08465 PF07840 FadR C-terminal domain N8E87_08465 PF00392 Bacterial regulatory proteins, gntR family N8E87_08470 PF06450 Bacterial Na+/H+ antiporter B (NhaB) N8E87_08475 PF02600 Disulfide bond formation protein DsbB N8E87_08480 PF03741 Integral membrane protein TerC family N8E87_08485 PF02976 DNA mismatch repair enzyme MutH N8E87_08490 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N8E87_08490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N8E87_08495 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N8E87_08505 PF03458 UPF0126 domain N8E87_08510 PF00171 Aldehyde dehydrogenase family N8E87_08515 PF00696 Amino acid kinase family N8E87_08515 PF01842 ACT domain N8E87_08520 PF00581 Rhodanese-like domain N8E87_08525 PF04143 Sulphur transport N8E87_08530 PF00709 Adenylosuccinate synthetase N8E87_08545 PF01791 DeoC/LacD family aldolase N8E87_08550 PF01979 Amidohydrolase family N8E87_08555 PF08220 DeoR-like helix-turn-helix domain N8E87_08555 PF00455 DeoR C terminal sensor domain N8E87_08565 PF00884 Sulfatase N8E87_08570 PF04055 Radical SAM superfamily N8E87_08570 PF13186 Iron-sulfur cluster-binding domain N8E87_08580 PF07470 Glycosyl Hydrolase Family 88 N8E87_08585 PF03830 PTS system sorbose subfamily IIB component N8E87_08585 PF03610 PTS system fructose IIA component N8E87_08590 PF03613 PTS system mannose/fructose/sorbose family IID component N8E87_08595 PF03609 PTS system sorbose-specific iic component N8E87_08600 PF03830 PTS system sorbose subfamily IIB component N8E87_08605 PF01380 SIS domain N8E87_08610 PF08013 Tagatose 6 phosphate kinase N8E87_08615 PF00884 Sulfatase N8E87_08630 PF09339 IclR helix-turn-helix domain N8E87_08630 PF01614 Bacterial transcriptional regulator N8E87_08635 PF00294 pfkB family carbohydrate kinase N8E87_08640 PF01081 KDPG and KHG aldolase N8E87_08645 PF03009 Glycerophosphoryl diester phosphodiesterase family N8E87_08650 PF00005 ABC transporter N8E87_08650 PF08402 TOBE domain N8E87_08655 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_08660 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_08670 PF00328 Histidine phosphatase superfamily (branch 2) N8E87_08675 PF00480 ROK family N8E87_08680 PF08207 Elongation factor P (EF-P) KOW-like domain N8E87_08680 PF09285 Elongation factor P, C-terminal N8E87_08680 PF01132 Elongation factor P (EF-P) OB domain N8E87_08685 PF04055 Radical SAM superfamily N8E87_08690 PF04225 Opacity-associated protein A LysM-like domain N8E87_08690 PF08525 Opacity-associated protein A N-terminal motif N8E87_08700 PF04381 Putative exonuclease, RdgC N8E87_08705 PF03807 NADP oxidoreductase coenzyme F420-dependent N8E87_08705 PF14748 Pyrroline-5-carboxylate reductase dimerisation N8E87_08710 PF12832 MFS_1 like family N8E87_08715 PF02899 Phage integrase, N-terminal SAM-like domain N8E87_08715 PF00589 Phage integrase family N8E87_08720 PF01817 Chorismate mutase type II N8E87_08720 PF00800 Prephenate dehydratase N8E87_08725 PF00698 Acyl transferase domain N8E87_08725 PF08240 Alcohol dehydrogenase GroES-like domain N8E87_08725 PF00107 Zinc-binding dehydrogenase N8E87_08725 PF16197 Ketoacyl-synthetase C-terminal extension N8E87_08725 PF00109 Beta-ketoacyl synthase, N-terminal domain N8E87_08725 PF00550 Phosphopantetheine attachment site N8E87_08725 PF14765 Polyketide synthase dehydratase N8E87_08725 PF08659 KR domain N8E87_08725 PF02801 Beta-ketoacyl synthase, C-terminal domain N8E87_08730 PF00106 short chain dehydrogenase N8E87_08735 PF01965 DJ-1/PfpI family N8E87_08740 PF01965 DJ-1/PfpI family N8E87_08750 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase N8E87_08755 PF12327 FtsZ family, C-terminal domain N8E87_08755 PF00091 Tubulin/FtsZ family, GTPase domain N8E87_08760 PF02491 SHS2 domain inserted in FTSA N8E87_08765 PF03799 Cell division protein FtsQ N8E87_08765 PF08478 POTRA domain, FtsQ-type N8E87_08770 PF07478 D-ala D-ala ligase C-terminus N8E87_08770 PF01820 D-ala D-ala ligase N-terminus N8E87_08775 PF08245 Mur ligase middle domain N8E87_08775 PF02875 Mur ligase family, glutamate ligase domain N8E87_08775 PF01225 Mur ligase family, catalytic domain N8E87_08780 PF03033 Glycosyltransferase family 28 N-terminal domain N8E87_08780 PF04101 Glycosyltransferase family 28 C-terminal domain N8E87_08785 PF01098 Cell cycle protein N8E87_08790 PF08245 Mur ligase middle domain N8E87_08790 PF02875 Mur ligase family, glutamate ligase domain N8E87_08795 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 N8E87_08795 PF00953 Glycosyl transferase family 4 N8E87_08800 PF08245 Mur ligase middle domain N8E87_08800 PF02875 Mur ligase family, glutamate ligase domain N8E87_08800 PF01225 Mur ligase family, catalytic domain N8E87_08805 PF02875 Mur ligase family, glutamate ligase domain N8E87_08805 PF01225 Mur ligase family, catalytic domain N8E87_08805 PF08245 Mur ligase middle domain N8E87_08810 PF00905 Penicillin binding protein transpeptidase domain N8E87_08810 PF03717 Penicillin-binding Protein dimerisation domain N8E87_08815 PF04999 Cell division protein FtsL N8E87_08820 PF01795 MraW methylase family N8E87_08825 PF02381 MraZ protein, putative antitoxin-like N8E87_08835 PF17176 tRNA-binding domain N8E87_08835 PF05127 Helicase N8E87_08835 PF13718 GNAT acetyltransferase 2 N8E87_08840 PF02130 Uncharacterized protein family UPF0054 N8E87_08845 PF02562 PhoH-like protein N8E87_08850 PF00149 Calcineurin-like phosphoesterase N8E87_08855 PF01553 Acyltransferase N8E87_08860 PF07732 Multicopper oxidase N8E87_08865 PF13230 Glutamine amidotransferases class-II N8E87_08870 PF03222 Tryptophan/tyrosine permease family N8E87_08875 PF03313 Serine dehydratase alpha chain N8E87_08875 PF03315 Serine dehydratase beta chain N8E87_08880 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal N8E87_08880 PF01578 Cytochrome C assembly protein N8E87_08885 PF08534 Redoxin N8E87_08890 PF03918 Cytochrome C biogenesis protein N8E87_08895 PF03918 Cytochrome C biogenesis protein N8E87_08905 PF07733 Bacterial DNA polymerase III alpha NTPase domain N8E87_08905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N8E87_08905 PF14579 Helix-hairpin-helix motif N8E87_08905 PF02811 PHP domain N8E87_08905 PF01336 OB-fold nucleic acid binding domain N8E87_08910 PF03916 Polysulphide reductase, NrfD N8E87_08915 PF13247 4Fe-4S dicluster domain N8E87_08925 PF02335 Cytochrome c552 N8E87_08930 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family N8E87_08930 PF04055 Radical SAM superfamily N8E87_08935 PF03099 Biotin/lipoate A/B protein ligase family N8E87_08940 PF04359 Protein of unknown function (DUF493) N8E87_08945 PF07943 Penicillin-binding protein 5, C-terminal domain N8E87_08945 PF00768 D-alanyl-D-alanine carboxypeptidase N8E87_08950 PF03330 Lytic transglycolase N8E87_08950 PF05036 Sporulation related domain N8E87_08955 PF01098 Cell cycle protein N8E87_08960 PF00905 Penicillin binding protein transpeptidase domain N8E87_08960 PF03717 Penicillin-binding Protein dimerisation domain N8E87_08965 PF02590 Predicted SPOUT methyltransferase N8E87_08975 PF00271 Helicase conserved C-terminal domain N8E87_08975 PF00270 DEAD/DEAH box helicase N8E87_08980 PF07497 Rho termination factor, RNA-binding domain N8E87_08980 PF07498 Rho termination factor, N-terminal domain N8E87_08980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N8E87_08985 PF07690 Major Facilitator Superfamily N8E87_08995 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) N8E87_09000 PF00485 Phosphoribulokinase / Uridine kinase family N8E87_09005 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_09010 PF00005 ABC transporter N8E87_09010 PF08402 TOBE domain N8E87_09040 PF12724 Flavodoxin domain N8E87_09045 PF02386 Cation transport protein N8E87_09050 PF01205 Uncharacterized protein family UPF0029 N8E87_09050 PF09186 Domain of unknown function (DUF1949) N8E87_09055 PF01206 Sulfurtransferase TusA N8E87_09060 PF00300 Histidine phosphatase superfamily (branch 1) N8E87_09065 PF01551 Peptidase family M23 N8E87_09070 PF04748 Divergent polysaccharide deacetylase N8E87_09075 PF00156 Phosphoribosyl transferase domain N8E87_09080 PF01521 Iron-sulphur cluster biosynthesis N8E87_09080 PF01106 NifU-like domain N8E87_09085 PF00140 Sigma-70 factor, region 1.2 N8E87_09085 PF04545 Sigma-70, region 4 N8E87_09085 PF04542 Sigma-70 region 2 N8E87_09095 PF01565 FAD binding domain N8E87_09095 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N8E87_09100 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term N8E87_09100 PF00672 HAMP domain N8E87_09100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E87_09100 PF07730 Histidine kinase N8E87_09105 PF03927 NapD protein N8E87_09110 PF00384 Molybdopterin oxidoreductase N8E87_09110 PF01568 Molydopterin dinucleotide binding domain N8E87_09110 PF10518 TAT (twin-arginine translocation) pathway signal sequence N8E87_09110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N8E87_09120 PF12801 4Fe-4S binding domain N8E87_09120 PF12837 4Fe-4S binding domain N8E87_09125 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) N8E87_09130 PF03264 NapC/NirT cytochrome c family, N-terminal region N8E87_09135 PF00575 S1 RNA binding domain N8E87_09135 PF01138 3' exoribonuclease family, domain 1 N8E87_09135 PF00013 KH domain N8E87_09135 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain N8E87_09135 PF03725 3' exoribonuclease family, domain 2 N8E87_09145 PF03880 DbpA RNA binding domain N8E87_09145 PF00270 DEAD/DEAH box helicase N8E87_09145 PF00271 Helicase conserved C-terminal domain N8E87_09150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N8E87_09160 PF06877 Regulator of ribonuclease activity B N8E87_09165 PF02080 TrkA-C domain N8E87_09165 PF02254 TrkA-N domain N8E87_09170 PF01189 16S rRNA methyltransferase RsmB/F N8E87_09170 PF01029 NusB family N8E87_09175 PF02911 Formyl transferase, C-terminal domain N8E87_09175 PF00551 Formyl transferase N8E87_09180 PF07992 Pyridine nucleotide-disulphide oxidoreductase N8E87_09185 PF00294 pfkB family carbohydrate kinase N8E87_09195 PF01116 Fructose-bisphosphate aldolase class-II N8E87_09200 PF00162 Phosphoglycerate kinase N8E87_09205 PF00445 Ribonuclease T2 family N8E87_09210 PF00037 4Fe-4S binding domain N8E87_09215 PF08032 RNA 2'-O ribose methyltransferase substrate binding N8E87_09215 PF00588 SpoU rRNA Methylase family N8E87_09220 PF13091 PLD-like domain N8E87_09230 PF00881 Nitroreductase family N8E87_09235 PF03605 Anaerobic c4-dicarboxylate membrane transporter N8E87_09240 PF00581 Rhodanese-like domain N8E87_09245 PF02556 Preprotein translocase subunit SecB N8E87_09250 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus N8E87_09250 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus N8E87_09255 PF06426 Serine acetyltransferase, N-terminal N8E87_09255 PF00132 Bacterial transferase hexapeptide (six repeats) N8E87_09265 PF08019 Phosphoethanolamine transferase EptA/EptB N8E87_09265 PF00884 Sulfatase N8E87_09270 PF00376 MerR family regulatory protein N8E87_09270 PF09278 MerR, DNA binding N8E87_09275 PF07690 Major Facilitator Superfamily N8E87_09280 PF00849 RNA pseudouridylate synthase N8E87_09280 PF01479 S4 domain N8E87_09285 PF00390 Malic enzyme, N-terminal domain N8E87_09285 PF03949 Malic enzyme, NAD binding domain N8E87_09285 PF01515 Phosphate acetyl/butaryl transferase N8E87_09290 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N8E87_09290 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N8E87_09295 PF00884 Sulfatase N8E87_09300 PF01245 Ribosomal protein L19 N8E87_09305 PF01746 tRNA (Guanine-1)-methyltransferase N8E87_09310 PF01782 RimM N-terminal domain N8E87_09310 PF05239 PRC-barrel domain N8E87_09315 PF00886 Ribosomal protein S16 N8E87_09320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N8E87_09325 PF00535 Glycosyl transferase family 2 N8E87_09335 PF03610 PTS system fructose IIA component N8E87_09335 PF03830 PTS system sorbose subfamily IIB component N8E87_09340 PF03609 PTS system sorbose-specific iic component N8E87_09345 PF03613 PTS system mannose/fructose/sorbose family IID component N8E87_09355 PF02655 ATP-grasp domain N8E87_09355 PF18419 ATP-grasp-like domain N8E87_09355 PF04262 Glutamate-cysteine ligase N8E87_09360 PF00111 2Fe-2S iron-sulfur cluster binding domain N8E87_09365 PF00012 Hsp70 protein N8E87_09370 PF07743 HSCB C-terminal oligomerisation domain N8E87_09375 PF07743 HSCB C-terminal oligomerisation domain N8E87_09380 PF01521 Iron-sulphur cluster biosynthesis N8E87_09385 PF01592 NifU-like N terminal domain N8E87_09390 PF00266 Aminotransferase class-V N8E87_09395 PF02082 Transcriptional regulator N8E87_09400 PF00588 SpoU rRNA Methylase family N8E87_09405 PF00459 Inositol monophosphatase family N8E87_09410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N8E87_09415 PF04261 Dyp-type peroxidase family N8E87_09420 PF05175 Methyltransferase small domain N8E87_09425 PF00271 Helicase conserved C-terminal domain N8E87_09425 PF00270 DEAD/DEAH box helicase N8E87_09430 PF01118 Semialdehyde dehydrogenase, NAD binding domain N8E87_09430 PF02774 Semialdehyde dehydrogenase, dimerisation domain N8E87_09435 PF03887 YfbU domain N8E87_09440 PF04333 MlaA lipoprotein N8E87_09445 PF00117 Glutamine amidotransferase class-I N8E87_09445 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain N8E87_09450 PF02142 MGS-like domain N8E87_09450 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N8E87_09450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N8E87_09455 PF00543 Nitrogen regulatory protein P-II N8E87_09460 PF00909 Ammonium Transporter Family N8E87_09465 PF00909 Ammonium Transporter Family N8E87_09470 PF04393 Protein of unknown function (DUF535) N8E87_09475 PF05872 Bacterial protein of unknown function (DUF853) N8E87_09480 PF13525 Outer membrane lipoprotein N8E87_09485 PF00849 RNA pseudouridylate synthase N8E87_09485 PF01479 S4 domain N8E87_09490 PF02578 Multi-copper polyphenol oxidoreductase laccase N8E87_09495 PF03702 Anhydro-N-acetylmuramic acid kinase N8E87_09500 PF01925 Sulfite exporter TauE/SafE N8E87_09510 PF00132 Bacterial transferase hexapeptide (six repeats) N8E87_09510 PF12804 MobA-like NTP transferase domain N8E87_09515 PF00924 Mechanosensitive ion channel N8E87_09515 PF05552 Conserved TM helix N8E87_09520 PF02541 Ppx/GppA phosphatase family N8E87_09525 PF04357 TamB, inner membrane protein subunit of TAM complex N8E87_09530 PF01103 Surface antigen N8E87_09530 PF17243 POTRA domain TamA domain 1 N8E87_09535 PF03023 Lipid II flippase MurJ N8E87_09540 PF01649 Ribosomal protein S20 N8E87_09545 PF10144 Bacterial virulence factor haemolysin N8E87_09550 PF18429 Domain of unknown function (DUF5609) N8E87_09555 PF04461 Protein of unknown function (DUF520) N8E87_09560 PF04445 Putative SAM-dependent methyltransferase N8E87_09565 PF05958 tRNA (Uracil-5-)-methyltransferase N8E87_09570 PF04219 Protein of unknown function, DUF N8E87_09575 PF01323 DSBA-like thioredoxin domain N8E87_09580 PF06288 Protein of unknown function (DUF1040) N8E87_09585 PF12804 MobA-like NTP transferase domain N8E87_09590 PF01571 Aminomethyltransferase folate-binding domain N8E87_09595 PF08340 Domain of unknown function (DUF1732) N8E87_09595 PF03755 YicC-like family, N-terminal region N8E87_09600 PF03725 3' exoribonuclease family, domain 2 N8E87_09600 PF01138 3' exoribonuclease family, domain 1 N8E87_09605 PF00156 Phosphoribosyl transferase domain N8E87_09610 PF00226 DnaJ domain N8E87_09610 PF05099 Tellurite resistance protein TerB N8E87_09615 PF01207 Dihydrouridine synthase (Dus) N8E87_09625 PF11893 Domain of unknown function (DUF3413) N8E87_09625 PF00884 Sulfatase N8E87_09630 PF07208 Protein of unknown function (DUF1414) N8E87_09635 PF04245 37-kD nucleoid-associated bacterial protein N8E87_09640 PF04355 SmpA / OmlA family N8E87_09645 PF00486 Transcriptional regulatory protein, C terminal N8E87_09645 PF00072 Response regulator receiver domain N8E87_09650 PF01184 GPR1/FUN34/yaaH family N8E87_09655 PF04998 RNA polymerase Rpb1, domain 5 N8E87_09655 PF05000 RNA polymerase Rpb1, domain 4 N8E87_09655 PF04983 RNA polymerase Rpb1, domain 3 N8E87_09655 PF00623 RNA polymerase Rpb1, domain 2 N8E87_09655 PF04997 RNA polymerase Rpb1, domain 1 N8E87_09660 PF04560 RNA polymerase Rpb2, domain 7 N8E87_09660 PF00562 RNA polymerase Rpb2, domain 6 N8E87_09660 PF10385 RNA polymerase beta subunit external 1 domain N8E87_09660 PF04565 RNA polymerase Rpb2, domain 3 N8E87_09660 PF04561 RNA polymerase Rpb2, domain 2 N8E87_09660 PF04563 RNA polymerase beta subunit N8E87_09665 PF16320 Ribosomal protein L7/L12 dimerisation domain N8E87_09665 PF00542 Ribosomal protein L7/L12 C-terminal domain N8E87_09670 PF00466 Ribosomal protein L10 N8E87_09675 PF00687 Ribosomal protein L1p/L10e family N8E87_09680 PF03946 Ribosomal protein L11, N-terminal domain N8E87_09680 PF00298 Ribosomal protein L11, RNA binding domain N8E87_09700 PF02357 Transcription termination factor nusG N8E87_09700 PF00467 KOW motif N8E87_09705 PF00584 SecE/Sec61-gamma subunits of protein translocation complex N8E87_09715 PF03144 Elongation factor Tu domain 2 N8E87_09715 PF00009 Elongation factor Tu GTP binding domain N8E87_09715 PF03764 Elongation factor G, domain IV N8E87_09715 PF14492 Elongation Factor G, domain II N8E87_09715 PF00679 Elongation factor G C-terminus N8E87_09720 PF00177 Ribosomal protein S7p/S5e N8E87_09725 PF00164 Ribosomal protein S12/S23 N8E87_09740 PF02635 DsrE/DsrF-like family N8E87_09745 PF02635 DsrE/DsrF-like family N8E87_09750 PF08348 YheO-like PAS domain N8E87_09750 PF13309 HTH domain N8E87_09755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N8E87_09755 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N8E87_09760 PF04102 SlyX N8E87_09765 PF00462 Glutaredoxin N8E87_09765 PF08534 Redoxin N8E87_09770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E87_09770 PF03466 LysR substrate binding domain N8E87_09775 PF00440 Bacterial regulatory proteins, tetR family N8E87_09780 PF12146 Serine aminopeptidase, S33 N8E87_09785 PF02537 CrcB-like protein, Camphor Resistance (CrcB) N8E87_09795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N8E87_09795 PF00205 Thiamine pyrophosphate enzyme, central domain N8E87_09795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N8E87_09805 PF00920 Dehydratase family N8E87_09815 PF00291 Pyridoxal-phosphate dependent enzyme N8E87_09815 PF00585 C-terminal regulatory domain of Threonine dehydratase N8E87_09835 PF03590 Aspartate-ammonia ligase N8E87_09840 PF13404 AsnC-type helix-turn-helix domain N8E87_09840 PF01037 Lrp/AsnC ligand binding domain N8E87_09845 PF03498 Cytolethal distending toxin A/C domain N8E87_09850 PF03372 Endonuclease/Exonuclease/phosphatase family N8E87_09855 PF03498 Cytolethal distending toxin A/C domain N8E87_09860 PF12762 ISXO2-like transposase domain N8E87_09865 PF03968 OstA-like protein N8E87_09865 PF04453 LPS transport system D N8E87_09870 PF03352 Methyladenine glycosylase N8E87_09875 PF00923 Transaldolase/Fructose-6-phosphate aldolase N8E87_09880 PF07274 Protein of unknown function (DUF1440) N8E87_09885 PF00293 NUDIX domain N8E87_09890 PF00849 RNA pseudouridylate synthase N8E87_09895 PF00180 Isocitrate/isopropylmalate dehydrogenase N8E87_09900 PF02954 Bacterial regulatory protein, Fis family N8E87_09905 PF01207 Dihydrouridine synthase (Dus) N8E87_09915 PF00474 Sodium:solute symporter family N8E87_09920 PF06196 Protein of unknown function (DUF997) N8E87_09975 PF02785 Biotin carboxylase C-terminal domain N8E87_09975 PF00289 Biotin carboxylase, N-terminal domain N8E87_09975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N8E87_09980 PF00364 Biotin-requiring enzyme N8E87_09985 PF01220 Dehydroquinase class II N8E87_09990 PF13378 Enolase C-terminal domain-like N8E87_10000 PF00378 Enoyl-CoA hydratase/isomerase N8E87_10005 PF07724 AAA domain (Cdc48 subfamily) N8E87_10005 PF17871 AAA lid domain N8E87_10005 PF02861 Clp amino terminal domain, pathogenicity island component N8E87_10005 PF10431 C-terminal, D2-small domain, of ClpB protein N8E87_10005 PF00004 ATPase family associated with various cellular activities (AAA) N8E87_10010 PF01678 Diaminopimelate epimerase N8E87_10020 PF10150 Ribonuclease E/G family N8E87_10020 PF12111 Polyribonucleotide phosphorylase C terminal N8E87_10020 PF00575 S1 RNA binding domain N8E87_10025 PF00849 RNA pseudouridylate synthase N8E87_10025 PF01479 S4 domain N8E87_10030 PF09107 Elongation factor SelB, winged helix N8E87_10030 PF09106 Elongation factor SelB, winged helix N8E87_10030 PF03144 Elongation factor Tu domain 2 N8E87_10030 PF00009 Elongation factor Tu GTP binding domain N8E87_10035 PF03841 L-seryl-tRNA selenium transferase N8E87_10035 PF12390 Selenocysteine synthase N terminal N8E87_10040 PF04320 Protein with unknown function (DUF469) N8E87_10045 PF02390 Putative methyltransferase N8E87_10050 PF01078 Magnesium chelatase, subunit ChlI N8E87_10050 PF13335 Magnesium chelatase, subunit ChlI C-terminal N8E87_10055 PF00282 Pyridoxal-dependent decarboxylase conserved domain N8E87_10060 PF00202 Aminotransferase class-III N8E87_10070 PF07219 HemY protein N-terminus N8E87_10075 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase N8E87_10080 PF02602 Uroporphyrinogen-III synthase HemD N8E87_10085 PF03900 Porphobilinogen deaminase, C-terminal domain N8E87_10085 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain N8E87_10090 PF01295 Adenylate cyclase, class-I N8E87_10090 PF12633 Adenylate cyclase NT domain N8E87_10095 PF00072 Response regulator receiver domain N8E87_10095 PF00196 Bacterial regulatory proteins, luxR family N8E87_10100 PF02580 D-Tyr-tRNA(Tyr) deacylase N8E87_10105 PF03631 Virulence factor BrkB N8E87_10110 PF02810 SEC-C motif N8E87_10115 PF01614 Bacterial transcriptional regulator N8E87_10115 PF09339 IclR helix-turn-helix domain N8E87_10120 PF02615 Malate/L-lactate dehydrogenase N8E87_10125 PF04074 YhcH/YjgK/YiaL N8E87_10130 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N8E87_10135 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N8E87_10140 PF03480 Bacterial extracellular solute-binding protein, family 7 N8E87_10145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N8E87_10145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N8E87_10150 PF01261 Xylose isomerase-like TIM barrel N8E87_10155 PF00596 Class II Aldolase and Adducin N-terminal domain N8E87_10160 PF02780 Transketolase, C-terminal domain N8E87_10160 PF00456 Transketolase, thiamine diphosphate binding domain N8E87_10160 PF02779 Transketolase, pyrimidine binding domain N8E87_10165 PF00005 ABC transporter N8E87_10170 PF18075 FtsX extracellular domain N8E87_10175 PF02594 Uncharacterised ACR, YggU family COG1872 N8E87_10180 PF02325 YGGT family N8E87_10185 PF01544 CorA-like Mg2+ transporter protein N8E87_10195 PF00589 Phage integrase family N8E87_10205 PF04717 Type VI secretion system, phage-baseplate injector N8E87_10240 PF04717 Type VI secretion system, phage-baseplate injector N8E87_10275 PF04717 Type VI secretion system, phage-baseplate injector N8E87_10325 PF04717 Type VI secretion system, phage-baseplate injector N8E87_10345 PF04717 Type VI secretion system, phage-baseplate injector N8E87_10370 PF10431 C-terminal, D2-small domain, of ClpB protein N8E87_10370 PF17871 AAA lid domain N8E87_10370 PF00004 ATPase family associated with various cellular activities (AAA) N8E87_10370 PF07724 AAA domain (Cdc48 subfamily) N8E87_10380 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE N8E87_10400 PF05947 Type VI secretion system, TssF N8E87_10410 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath N8E87_10420 PF05638 Type VI secretion system effector, Hcp N8E87_10430 PF05593 RHS Repeat N8E87_10430 PF05488 PAAR motif N8E87_10450 PF05593 RHS Repeat N8E87_10450 PF05488 PAAR motif N8E87_10510 PF01734 Patatin-like phospholipase N8E87_10520 PF02796 Helix-turn-helix domain of resolvase N8E87_10520 PF00239 Resolvase, N terminal domain N8E87_10530 PF08681 Protein of unknown function (DUF1778) N8E87_10545 PF08401 Domain of unknown function (DUF1738) N8E87_10545 PF18818 Metallopeptidase superfamily domain N8E87_10545 PF13362 Toprim domain N8E87_10755 PF01131 DNA topoisomerase N8E87_10755 PF01751 Toprim domain N8E87_10775 PF00436 Single-strand binding protein family N8E87_10810 PF03796 DnaB-like helicase C terminal domain N8E87_10810 PF00772 DnaB-like helicase N terminal domain N8E87_10830 PF01464 Transglycosylase SLT domain N8E87_10830 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain N8E87_10835 PF04362 Bacterial Fe(2+) trafficking N8E87_10840 PF14815 NUDIX domain N8E87_10840 PF00730 HhH-GPD superfamily base excision DNA repair protein N8E87_10845 PF13407 Periplasmic binding protein domain N8E87_10850 PF00005 ABC transporter N8E87_10855 PF02653 Branched-chain amino acid transport system / permease component N8E87_10860 PF03652 Holliday junction resolvase N8E87_10865 PF02622 Uncharacterized ACR, COG1678 N8E87_10870 PF04452 RNA methyltransferase N8E87_10875 PF02254 TrkA-N domain N8E87_10875 PF00999 Sodium/hydrogen exchanger family N8E87_10880 PF03608 PTS system enzyme II sorbitol-specific factor N8E87_10885 PF03612 Sorbitol phosphotransferase enzyme II N-terminus N8E87_10885 PF07663 Sorbitol phosphotransferase enzyme II C-terminus N8E87_10890 PF03829 PTS system glucitol/sorbitol-specific IIA component N8E87_10895 PF00106 short chain dehydrogenase N8E87_10900 PF06923 Glucitol operon activator protein (GutM) N8E87_10905 PF00455 DeoR C terminal sensor domain N8E87_10905 PF08220 DeoR-like helix-turn-helix domain N8E87_10915 PF04356 Protein of unknown function (DUF489) N8E87_10920 PF08328 Adenylosuccinate lyase C-terminal N8E87_10920 PF00206 Lyase N8E87_10925 PF03553 Na+/H+ antiporter family N8E87_10930 PF00155 Aminotransferase class I and II N8E87_10940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N8E87_10940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N8E87_10945 PF12833 Helix-turn-helix domain N8E87_10950 PF01926 50S ribosome-binding GTPase N8E87_10955 PF06418 CTP synthase N-terminus N8E87_10955 PF00117 Glutamine amidotransferase class-I N8E87_10985 PF00005 ABC transporter N8E87_10985 PF09383 NIL domain N8E87_10990 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_10995 PF03180 NLPA lipoprotein N8E87_11000 PF01914 MarC family integral membrane protein N8E87_11005 PF00588 SpoU rRNA Methylase family N8E87_11010 PF05525 Branched-chain amino acid transport protein N8E87_11015 PF00483 Nucleotidyl transferase N8E87_11020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N8E87_11020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N8E87_11020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N8E87_11020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N8E87_11025 PF02599 Global regulator protein family N8E87_11030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N8E87_11030 PF01411 tRNA synthetases class II (A) N8E87_11030 PF02272 DHHA1 domain N8E87_11035 PF00582 Universal stress protein family N8E87_11040 PF03819 MazG nucleotide pyrophosphohydrolase domain N8E87_11045 PF00892 EamA-like transporter family N8E87_11050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E87_11050 PF03466 LysR substrate binding domain N8E87_11055 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain N8E87_11055 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain N8E87_11060 PF16347 Domain of unknown function (DUF4976) N8E87_11060 PF00884 Sulfatase N8E87_11070 PF00474 Sodium:solute symporter family N8E87_11075 PF12848 ABC transporter N8E87_11075 PF00005 ABC transporter N8E87_11080 PF04277 Oxaloacetate decarboxylase, gamma chain N8E87_11085 PF02436 Conserved carboxylase domain N8E87_11085 PF00682 HMGL-like N8E87_11085 PF00364 Biotin-requiring enzyme N8E87_11090 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit N8E87_11095 PF08220 DeoR-like helix-turn-helix domain N8E87_11095 PF00455 DeoR C terminal sensor domain N8E87_11100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N8E87_11100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N8E87_11105 PF17042 Nucleotide-binding C-terminal domain N8E87_11105 PF07005 Sugar-binding N-terminal domain N8E87_11110 PF00596 Class II Aldolase and Adducin N-terminal domain N8E87_11115 PF01261 Xylose isomerase-like TIM barrel N8E87_11120 PF04199 Putative cyclase N8E87_11125 PF00230 Major intrinsic protein N8E87_11130 PF01370 NAD dependent epimerase/dehydratase family N8E87_11135 PF02447 GntP family permease N8E87_11140 PF10503 Esterase PHB depolymerase N8E87_11145 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) N8E87_11150 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N8E87_11150 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N8E87_11155 PF13627 Prokaryotic lipoprotein-attachment site N8E87_11160 PF01491 Frataxin-like domain N8E87_11165 PF09382 RQC domain N8E87_11165 PF16124 RecQ zinc-binding N8E87_11165 PF00570 HRDC domain N8E87_11165 PF00271 Helicase conserved C-terminal domain N8E87_11165 PF00270 DEAD/DEAH box helicase N8E87_11170 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N8E87_11170 PF02142 MGS-like domain N8E87_11170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N8E87_11185 PF00156 Phosphoribosyl transferase domain N8E87_11190 PF01546 Peptidase family M20/M25/M40 N8E87_11190 PF07687 Peptidase dimerisation domain N8E87_11195 PF13508 Acetyltransferase (GNAT) domain N8E87_11205 PF16916 Dimerisation domain of Zinc Transporter N8E87_11205 PF01545 Cation efflux family N8E87_11210 PF09278 MerR, DNA binding N8E87_11210 PF00376 MerR family regulatory protein N8E87_11230 PF02384 N-6 DNA Methylase N8E87_11230 PF12161 HsdM N-terminal domain N8E87_11255 PF18766 SWI2/SNF2 ATPase N8E87_11255 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N8E87_11255 PF12008 Type I restriction and modification enzyme - subunit R C terminal N8E87_11260 PF01420 Type I restriction modification DNA specificity domain N8E87_11270 PF07690 Major Facilitator Superfamily N8E87_11275 PF00459 Inositol monophosphatase family N8E87_11280 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain N8E87_11285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N8E87_11285 PF02874 ATP synthase alpha/beta family, beta-barrel domain N8E87_11290 PF00231 ATP synthase N8E87_11295 PF00306 ATP synthase alpha/beta chain, C terminal domain N8E87_11295 PF02874 ATP synthase alpha/beta family, beta-barrel domain N8E87_11295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N8E87_11300 PF00213 ATP synthase delta (OSCP) subunit N8E87_11305 PF00430 ATP synthase B/B' CF(0) N8E87_11310 PF00137 ATP synthase subunit C N8E87_11315 PF00119 ATP synthase A chain N8E87_11325 PF02527 rRNA small subunit methyltransferase G N8E87_11330 PF13932 GidA associated domain N8E87_11330 PF01134 Glucose inhibited division protein A N8E87_11335 PF00258 Flavodoxin N8E87_11340 PF06005 Cell division protein ZapB N8E87_11345 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded N8E87_11350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N8E87_11350 PF18053 DNA gyrase B subunit insert domain N8E87_11350 PF00986 DNA gyrase B subunit, carboxyl terminus N8E87_11350 PF01751 Toprim domain N8E87_11350 PF00204 DNA gyrase B N8E87_11355 PF00593 TonB dependent receptor N8E87_11355 PF07715 TonB-dependent Receptor Plug Domain N8E87_11360 PF00005 ABC transporter N8E87_11360 PF00664 ABC transporter transmembrane region N8E87_11365 PF00664 ABC transporter transmembrane region N8E87_11365 PF00005 ABC transporter N8E87_11370 PF03150 Di-haem cytochrome c peroxidase N8E87_11370 PF00034 Cytochrome c N8E87_11370 PF14376 Haem-binding domain N8E87_11380 PF00209 Sodium:neurotransmitter symporter family N8E87_11385 PF18317 Shikimate 5'-dehydrogenase C-terminal domain N8E87_11385 PF08501 Shikimate dehydrogenase substrate binding domain N8E87_11385 PF01488 Shikimate / quinate 5-dehydrogenase N8E87_11390 PF01300 Telomere recombination N8E87_11395 PF01396 Topoisomerase DNA binding C4 zinc finger N8E87_11400 PF02545 Maf-like protein N8E87_11405 PF02646 RmuC family N8E87_11410 PF03350 Uncharacterized protein family, UPF0114 N8E87_11415 PF04993 TfoX N-terminal domain N8E87_11415 PF04994 TfoX C-terminal domain N8E87_11440 PF00238 Ribosomal protein L14p/L23e N8E87_11445 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 N8E87_11445 PF00467 KOW motif N8E87_11450 PF00281 Ribosomal protein L5 N8E87_11450 PF00673 ribosomal L5P family C-terminus N8E87_11455 PF00253 Ribosomal protein S14p/S29e N8E87_11460 PF00410 Ribosomal protein S8 N8E87_11465 PF00347 Ribosomal protein L6 N8E87_11470 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast N8E87_11475 PF03719 Ribosomal protein S5, C-terminal domain N8E87_11475 PF00333 Ribosomal protein S5, N-terminal domain N8E87_11480 PF00327 Ribosomal protein L30p/L7e N8E87_11485 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A N8E87_11490 PF00344 SecY translocase N8E87_11495 PF00444 Ribosomal protein L36 N8E87_11500 PF00416 Ribosomal protein S13/S18 N8E87_11505 PF00411 Ribosomal protein S11 N8E87_11510 PF00163 Ribosomal protein S4/S9 N-terminal domain N8E87_11510 PF01479 S4 domain N8E87_11515 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain N8E87_11515 PF01000 RNA polymerase Rpb3/RpoA insert domain N8E87_11515 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain N8E87_11520 PF01196 Ribosomal protein L17 N8E87_11525 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N8E87_11530 PF04380 Membrane fusogenic activity N8E87_11535 PF01467 Cytidylyltransferase-like N8E87_11535 PF13521 AAA domain N8E87_11540 PF00149 Calcineurin-like phosphoesterase N8E87_11550 PF18766 SWI2/SNF2 ATPase N8E87_11550 PF11867 Domain of unknown function (DUF3387) N8E87_11550 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N8E87_11560 PF01420 Type I restriction modification DNA specificity domain N8E87_11570 PF03923 Uncharacterized lipoprotein N8E87_11575 PF01722 BolA-like protein N8E87_11580 PF11973 NQRA C-terminal domain N8E87_11580 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) N8E87_11585 PF03116 NQR2, RnfD, RnfE family N8E87_11590 PF04205 FMN-binding domain N8E87_11595 PF02508 Rnf-Nqr subunit, membrane protein N8E87_11600 PF02508 Rnf-Nqr subunit, membrane protein N8E87_11605 PF00175 Oxidoreductase NAD-binding domain N8E87_11605 PF00970 Oxidoreductase FAD-binding domain N8E87_11605 PF00111 2Fe-2S iron-sulfur cluster binding domain N8E87_11610 PF02424 ApbE family N8E87_11615 PF04400 (Na+)-NQR maturation NqrM N8E87_11625 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) N8E87_11625 PF00534 Glycosyl transferases group 1 N8E87_11630 PF01467 Cytidylyltransferase-like N8E87_11635 PF03616 Sodium/glutamate symporter N8E87_11640 PF00485 Phosphoribulokinase / Uridine kinase family N8E87_11665 PF00009 Elongation factor Tu GTP binding domain N8E87_11665 PF03144 Elongation factor Tu domain 2 N8E87_11665 PF03143 Elongation factor Tu C-terminal domain N8E87_11670 PF00293 NUDIX domain N8E87_11670 PF09297 NADH pyrophosphatase zinc ribbon domain N8E87_11675 PF01208 Uroporphyrinogen decarboxylase (URO-D) N8E87_11680 PF04222 Protein of unknown function (DUF416) N8E87_11685 PF00216 Bacterial DNA-binding protein N8E87_11690 PF00455 DeoR C terminal sensor domain N8E87_11690 PF08220 DeoR-like helix-turn-helix domain N8E87_11695 PF01380 SIS domain N8E87_11705 PF01243 Pyridoxamine 5'-phosphate oxidase N8E87_11705 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region N8E87_11710 PF07690 Major Facilitator Superfamily N8E87_11715 PF03205 Molybdopterin guanine dinucleotide synthesis protein B N8E87_11725 PF03888 MucB/RseB N-terminal domain N8E87_11725 PF17188 MucB/RseB C-terminal domain N8E87_11730 PF03872 Anti sigma-E protein RseA, N-terminal domain N8E87_11730 PF03873 Anti sigma-E protein RseA, C-terminal domain N8E87_11735 PF04542 Sigma-70 region 2 N8E87_11735 PF08281 Sigma-70, region 4 N8E87_11740 PF03937 Flavinator of succinate dehydrogenase N8E87_11750 PF13649 Methyltransferase domain N8E87_11755 PF01797 Transposase IS200 like N8E87_11760 PF07282 Putative transposase DNA-binding domain N8E87_11760 PF01385 Probable transposase N8E87_11760 PF12323 Helix-turn-helix domain N8E87_11775 PF07669 Eco57I restriction-modification methylase N8E87_11785 PF04851 Type III restriction enzyme, res subunit N8E87_11790 PF18693 TRAM domain N8E87_11790 PF04055 Radical SAM superfamily N8E87_11790 PF00919 Uncharacterized protein family UPF0004 N8E87_11795 PF01451 Low molecular weight phosphotyrosine protein phosphatase N8E87_11800 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N8E87_11800 PF07992 Pyridine nucleotide-disulphide oxidoreductase N8E87_11805 PF00310 Glutamine amidotransferases class-II N8E87_11805 PF04898 Glutamate synthase central domain N8E87_11805 PF01645 Conserved region in glutamate synthase N8E87_11805 PF01493 GXGXG motif N8E87_11815 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N8E87_11820 PF00664 ABC transporter transmembrane region N8E87_11820 PF00005 ABC transporter N8E87_11825 PF05190 MutS family domain IV N8E87_11825 PF00488 MutS domain V N8E87_11825 PF05192 MutS domain III N8E87_11825 PF01624 MutS domain I N8E87_11825 PF05188 MutS domain II N8E87_11830 PF00696 Amino acid kinase family N8E87_11840 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin N8E87_11850 PF06545 Protein of unknown function (DUF1116) N8E87_11855 PF02629 CoA binding domain N8E87_11855 PF00549 CoA-ligase N8E87_11860 PF00857 Isochorismatase family N8E87_11865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E87_11865 PF03466 LysR substrate binding domain N8E87_11875 PF06545 Protein of unknown function (DUF1116) N8E87_11880 PF02629 CoA binding domain N8E87_11880 PF00549 CoA-ligase N8E87_11885 PF12796 Ankyrin repeats (3 copies) N8E87_11890 PF03466 LysR substrate binding domain N8E87_11890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N8E87_11895 PF00154 recA bacterial DNA recombination protein N8E87_11900 PF02631 RecX family N8E87_11905 PF03129 Anticodon binding domain N8E87_11905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N8E87_11905 PF04073 Aminoacyl-tRNA editing domain N8E87_11910 PF00005 ABC transporter N8E87_11915 PF00528 Binding-protein-dependent transport system inner membrane component N8E87_11920 PF00497 Bacterial extracellular solute-binding proteins, family 3 N8E87_11925 PF06969 HemN C-terminal domain N8E87_11925 PF04055 Radical SAM superfamily N8E87_11930 PF10675 Protein of unknown function (DUF2489) N8E87_11935 PF04220 Der GTPase activator (YihI) N8E87_11940 PF00849 RNA pseudouridylate synthase N8E87_11945 PF00176 SNF2 family N-terminal domain N8E87_11945 PF18337 RapA N-terminal Tudor like domain N8E87_11945 PF00271 Helicase conserved C-terminal domain N8E87_11945 PF12137 RNA polymerase recycling family C-terminal N8E87_11945 PF18339 RapA N-terminal Tudor like domain 1 N8E87_11950 PF04973 Nicotinamide mononucleotide transporter N8E87_11955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N8E87_11955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N8E87_11960 PF00171 Aldehyde dehydrogenase family N8E87_11965 PF04962 KduI/IolB family N8E87_11970 PF00480 ROK family N8E87_11975 PF00121 Triosephosphate isomerase N8E87_11995 PF09093 Lyase, catalytic N8E87_11995 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain N8E87_11995 PF09092 Lyase, N terminal N8E87_11995 PF02278 Polysaccharide lyase family 8, super-sandwich domain N8E87_12010 PF07690 Major Facilitator Superfamily N8E87_12015 PF00596 Class II Aldolase and Adducin N-terminal domain N8E87_12020 PF05025 RbsD / FucU transport protein family N8E87_12025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N8E87_12025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N8E87_12030 PF07882 L-fucose isomerase, second N-terminal domain N8E87_12030 PF02952 L-fucose isomerase, C-terminal domain N8E87_12030 PF07881 L-fucose isomerase, first N-terminal domain N8E87_12035 PF08220 DeoR-like helix-turn-helix domain N8E87_12035 PF00455 DeoR C terminal sensor domain N8E87_12040 PF01791 DeoC/LacD family aldolase N8E87_12045 PF01370 NAD dependent epimerase/dehydratase family N8E87_12050 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N8E87_12055 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N8E87_12060 PF13580 SIS domain N8E87_12065 PF00265 Thymidine kinase N8E87_12075 PF00814 Glycoprotease family N8E87_12080 PF01165 Ribosomal protein S21 N8E87_12085 PF01807 CHC2 zinc finger N8E87_12085 PF08275 DNA primase catalytic core, N-terminal domain N8E87_12085 PF10410 DnaB-helicase binding domain of primase N8E87_12085 PF08278 DNA primase DnaG DnaB-binding N8E87_12090 PF04546 Sigma-70, non-essential region N8E87_12090 PF03979 Sigma-70 factor, region 1.1 N8E87_12090 PF00140 Sigma-70 factor, region 1.2 N8E87_12090 PF04542 Sigma-70 region 2 N8E87_12090 PF04539 Sigma-70 region 3 N8E87_12090 PF04545 Sigma-70, region 4 N8E87_12105 PF04175 Protein of unknown function (DUF406) N8E87_12110 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain N8E87_12110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N8E87_12115 PF01909 Nucleotidyltransferase domain N8E87_12120 PF08780 Nucleotidyltransferase substrate binding protein like N8E87_12125 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N8E87_12130 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain N8E87_12130 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain N8E87_12135 PF00459 Inositol monophosphatase family N8E87_12140 PF03169 OPT oligopeptide transporter protein N8E87_12145 PF01479 S4 domain N8E87_12150 PF01430 Hsp33 protein N8E87_12155 PF01293 Phosphoenolpyruvate carboxykinase N8E87_12160 PF01340 Met Apo-repressor, MetJ N8E87_12165 PF00338 Ribosomal protein S10p/S20e N8E87_12170 PF00297 Ribosomal protein L3 N8E87_12175 PF00573 Ribosomal protein L4/L1 family N8E87_12180 PF00276 Ribosomal protein L23 N8E87_12185 PF00181 Ribosomal Proteins L2, RNA binding domain N8E87_12185 PF03947 Ribosomal Proteins L2, C-terminal domain N8E87_12190 PF00203 Ribosomal protein S19 N8E87_12195 PF00237 Ribosomal protein L22p/L17e N8E87_12200 PF07650 KH domain N8E87_12200 PF00189 Ribosomal protein S3, C-terminal domain N8E87_12205 PF00252 Ribosomal protein L16p/L10e N8E87_12210 PF00831 Ribosomal L29 protein N8E87_12215 PF00366 Ribosomal protein S17 N8E87_12305 PF03592 Terminase small subunit N8E87_12360 PF02096 60Kd inner membrane protein N8E87_12360 PF14849 YidC periplasmic domain N8E87_12365 PF01809 Putative membrane protein insertion efficiency factor N8E87_12370 PF00825 Ribonuclease P N8E87_12375 PF00468 Ribosomal protein L34