locus-tag class description CEW87_00010 PF00266 Aminotransferase class-V CEW87_00030 PF02754 Cysteine-rich domain CEW87_00035 PF02589 LUD domain CEW87_00035 PF11870 Domain of unknown function (DUF3390) CEW87_00035 PF13183 4Fe-4S dicluster domain CEW87_00040 PF02589 LUD domain CEW87_00050 PF01810 LysE type translocator CEW87_00055 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_00060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_00095 PF05231 MASE1 CEW87_00095 PF07730 Histidine kinase CEW87_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_00100 PF00196 Bacterial regulatory proteins, luxR family CEW87_00100 PF00072 Response regulator receiver domain CEW87_00105 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_00115 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_00120 PF02798 Glutathione S-transferase, N-terminal domain CEW87_00120 PF00043 Glutathione S-transferase, C-terminal domain CEW87_00125 PF01645 Conserved region in glutamate synthase CEW87_00130 PF00465 Iron-containing alcohol dehydrogenase CEW87_00145 PF03971 Monomeric isocitrate dehydrogenase CEW87_00150 PF00593 TonB dependent receptor CEW87_00150 PF07715 TonB-dependent Receptor Plug Domain CEW87_00165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_00175 PF00171 Aldehyde dehydrogenase family CEW87_00180 PF01965 DJ-1/PfpI family CEW87_00195 PF09339 IclR helix-turn-helix domain CEW87_00200 PF00378 Enoyl-CoA hydratase/isomerase CEW87_00210 PF07690 Major Facilitator Superfamily CEW87_00215 PF00005 ABC transporter CEW87_00220 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW87_00220 PF00005 ABC transporter CEW87_00240 PF00501 AMP-binding enzyme CEW87_00240 PF13193 AMP-binding enzyme C-terminal domain CEW87_00245 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW87_00245 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CEW87_00245 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW87_00250 PF02803 Thiolase, C-terminal domain CEW87_00250 PF00108 Thiolase, N-terminal domain CEW87_00260 PF00378 Enoyl-CoA hydratase/isomerase CEW87_00265 PF02770 Acyl-CoA dehydrogenase, middle domain CEW87_00265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW87_00265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW87_00270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW87_00270 PF02770 Acyl-CoA dehydrogenase, middle domain CEW87_00270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW87_00275 PF02685 Glucokinase CEW87_00280 PF00342 Phosphoglucose isomerase CEW87_00285 PF08241 Methyltransferase domain CEW87_00295 PF00348 Polyprenyl synthetase CEW87_00300 PF03009 Glycerophosphoryl diester phosphodiesterase family CEW87_00305 PF13416 Bacterial extracellular solute-binding protein CEW87_00315 PF00248 Aldo/keto reductase family CEW87_00320 PF18125 RlmM ferredoxin-like domain CEW87_00320 PF01728 FtsJ-like methyltransferase CEW87_00325 PF00271 Helicase conserved C-terminal domain CEW87_00325 PF00270 DEAD/DEAH box helicase CEW87_00330 PF03707 Bacterial signalling protein N terminal repeat CEW87_00330 PF00990 Diguanylate cyclase, GGDEF domain CEW87_00330 PF00563 EAL domain CEW87_00335 PF01712 Deoxynucleoside kinase CEW87_00340 PF02548 Ketopantoate hydroxymethyltransferase CEW87_00345 PF02569 Pantoate-beta-alanine ligase CEW87_00350 PF00478 IMP dehydrogenase / GMP reductase domain CEW87_00350 PF00571 CBS domain CEW87_00355 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CEW87_00355 PF11940 Domain of unknown function (DUF3458) Ig-like fold CEW87_00355 PF01433 Peptidase family M1 domain CEW87_00365 PF00689 Cation transporting ATPase, C-terminus CEW87_00365 PF00690 Cation transporter/ATPase, N-terminus CEW87_00370 PF03144 Elongation factor Tu domain 2 CEW87_00370 PF03764 Elongation factor G, domain IV CEW87_00370 PF00009 Elongation factor Tu GTP binding domain CEW87_00370 PF00679 Elongation factor G C-terminus CEW87_00370 PF14492 Elongation Factor G, domain II CEW87_00385 PF00474 Sodium:solute symporter family CEW87_00395 PF00582 Universal stress protein family CEW87_00400 PF00180 Isocitrate/isopropylmalate dehydrogenase CEW87_00405 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CEW87_00435 PF00034 Cytochrome c CEW87_00440 PF00174 Oxidoreductase molybdopterin binding domain CEW87_00445 PF01022 Bacterial regulatory protein, arsR family CEW87_00455 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_00455 PF10518 TAT (twin-arginine translocation) pathway signal sequence CEW87_00455 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding CEW87_00460 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEW87_00465 PF13344 Haloacid dehalogenase-like hydrolase CEW87_00465 PF00293 NUDIX domain CEW87_00470 PF00692 dUTPase CEW87_00475 PF02441 Flavoprotein CEW87_00475 PF04127 DNA / pantothenate metabolism flavoprotein CEW87_00480 PF04002 RadC-like JAB domain CEW87_00485 PF00830 Ribosomal L28 family CEW87_00490 PF00471 Ribosomal protein L33 CEW87_00495 PF00313 'Cold-shock' DNA-binding domain CEW87_00500 PF02617 ATP-dependent Clp protease adaptor protein ClpS CEW87_00505 PF10431 C-terminal, D2-small domain, of ClpB protein CEW87_00505 PF02861 Clp amino terminal domain, pathogenicity island component CEW87_00505 PF17871 AAA lid domain CEW87_00505 PF07724 AAA domain (Cdc48 subfamily) CEW87_00505 PF00004 ATPase family associated with various cellular activities (AAA) CEW87_00510 PF03737 Aldolase/RraA CEW87_00515 PF00463 Isocitrate lyase family CEW87_00525 PF00072 Response regulator receiver domain CEW87_00525 PF00486 Transcriptional regulatory protein, C terminal CEW87_00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_00530 PF00672 HAMP domain CEW87_00530 PF16527 Two-component sensor protein CpxA, periplasmic domain CEW87_00530 PF00512 His Kinase A (phospho-acceptor) domain CEW87_00535 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CEW87_00535 PF01266 FAD dependent oxidoreductase CEW87_00540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEW87_00540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEW87_00555 PF00581 Rhodanese-like domain CEW87_00560 PF01177 Asp/Glu/Hydantoin racemase CEW87_00565 PF01479 S4 domain CEW87_00565 PF00579 tRNA synthetases class I (W and Y) CEW87_00570 PF01476 LysM domain CEW87_00570 PF01551 Peptidase family M23 CEW87_00570 PF08525 Opacity-associated protein A N-terminal motif CEW87_00575 PF01521 Iron-sulphur cluster biosynthesis CEW87_00580 PF00380 Ribosomal protein S9/S16 CEW87_00585 PF00572 Ribosomal protein L13 CEW87_00595 PF03232 Ubiquinone biosynthesis protein COQ7 CEW87_00605 PF00293 NUDIX domain CEW87_00610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEW87_00610 PF03129 Anticodon binding domain CEW87_00610 PF04073 Aminoacyl-tRNA editing domain CEW87_00615 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CEW87_00615 PF01464 Transglycosylase SLT domain CEW87_00630 PF01523 Putative modulator of DNA gyrase CEW87_00635 PF00795 Carbon-nitrogen hydrolase CEW87_00645 PF08335 GlnD PII-uridylyltransferase CEW87_00645 PF03710 Glutamate-ammonia ligase adenylyltransferase CEW87_00650 PF05235 CHAD domain CEW87_00650 PF01928 CYTH domain CEW87_00680 PF00293 NUDIX domain CEW87_00685 PF01063 Amino-transferase class IV CEW87_00700 PF00561 alpha/beta hydrolase fold CEW87_00705 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEW87_00705 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEW87_00705 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEW87_00705 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEW87_00710 PF02272 DHHA1 domain CEW87_00710 PF01411 tRNA synthetases class II (A) CEW87_00710 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEW87_00715 PF01923 Cobalamin adenosyltransferase CEW87_00720 PF00817 impB/mucB/samB family CEW87_00720 PF11799 impB/mucB/samB family C-terminal domain CEW87_00730 PF00793 DAHP synthetase I family CEW87_00735 PF00174 Oxidoreductase molybdopterin binding domain CEW87_00740 PF01794 Ferric reductase like transmembrane component CEW87_00745 PF00994 Probable molybdopterin binding domain CEW87_00750 PF04751 Protein of unknown function (DUF615) CEW87_00755 PF01523 Putative modulator of DNA gyrase CEW87_00760 PF00563 EAL domain CEW87_00760 PF00990 Diguanylate cyclase, GGDEF domain CEW87_00760 PF03707 Bacterial signalling protein N terminal repeat CEW87_00765 PF13406 Transglycosylase SLT domain CEW87_00780 PF04172 LrgB-like family CEW87_00790 PF00672 HAMP domain CEW87_00790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_00790 PF13426 PAS domain CEW87_00790 PF00512 His Kinase A (phospho-acceptor) domain CEW87_00795 PF00486 Transcriptional regulatory protein, C terminal CEW87_00795 PF00072 Response regulator receiver domain CEW87_00800 PF00072 Response regulator receiver domain CEW87_00800 PF00563 EAL domain CEW87_00800 PF00990 Diguanylate cyclase, GGDEF domain CEW87_00805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_00805 PF00512 His Kinase A (phospho-acceptor) domain CEW87_00805 PF08446 PAS fold CEW87_00805 PF01590 GAF domain CEW87_00805 PF00360 Phytochrome region CEW87_00815 PF00873 AcrB/AcrD/AcrF family CEW87_00825 PF02769 AIR synthase related protein, C-terminal domain CEW87_00825 PF00586 AIR synthase related protein, N-terminal domain CEW87_00830 PF01594 AI-2E family transporter CEW87_00835 PF00308 Bacterial dnaA protein CEW87_00835 PF08299 Bacterial dnaA protein helix-turn-helix CEW87_00835 PF11638 DnaA N-terminal domain CEW87_00845 PF00149 Calcineurin-like phosphoesterase CEW87_00855 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_00860 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_00865 PF17912 MalK OB fold domain CEW87_00865 PF00005 ABC transporter CEW87_00870 PF08220 DeoR-like helix-turn-helix domain CEW87_00870 PF00455 DeoR C terminal sensor domain CEW87_00875 PF12626 Polymerase A arginine-rich C-terminus CEW87_00875 PF12627 Probable RNA and SrmB- binding site of polymerase A CEW87_00875 PF01743 Poly A polymerase head domain CEW87_00880 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CEW87_00895 PF02233 NAD(P) transhydrogenase beta subunit CEW87_00900 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CEW87_00905 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CEW87_00905 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CEW87_00915 PF02754 Cysteine-rich domain CEW87_00915 PF13183 4Fe-4S dicluster domain CEW87_00920 PF01565 FAD binding domain CEW87_00925 PF01565 FAD binding domain CEW87_00925 PF02913 FAD linked oxidases, C-terminal domain CEW87_00930 PF07840 FadR C-terminal domain CEW87_00930 PF00392 Bacterial regulatory proteins, gntR family CEW87_00935 PF00916 Sulfate permease family CEW87_00935 PF01740 STAS domain CEW87_00940 PF00829 Ribosomal prokaryotic L21 protein CEW87_00945 PF01016 Ribosomal L27 protein CEW87_00950 PF01018 GTP1/OBG CEW87_00950 PF01926 50S ribosome-binding GTPase CEW87_00955 PF01472 PUA domain CEW87_00955 PF00696 Amino acid kinase family CEW87_00965 PF00501 AMP-binding enzyme CEW87_00980 PF02913 FAD linked oxidases, C-terminal domain CEW87_00980 PF01565 FAD binding domain CEW87_00985 PF12704 MacB-like periplasmic core domain CEW87_00985 PF02687 FtsX-like permease family CEW87_01000 PF13193 AMP-binding enzyme C-terminal domain CEW87_01000 PF00501 AMP-binding enzyme CEW87_01000 PF16177 Acetyl-coenzyme A synthetase N-terminus CEW87_01005 PF00486 Transcriptional regulatory protein, C terminal CEW87_01005 PF00072 Response regulator receiver domain CEW87_01010 PF00107 Zinc-binding dehydrogenase CEW87_01010 PF08240 Alcohol dehydrogenase GroES-like domain CEW87_01020 PF04011 LemA family CEW87_01050 PF01464 Transglycosylase SLT domain CEW87_01050 PF01551 Peptidase family M23 CEW87_01050 PF10145 Phage-related minor tail protein CEW87_01055 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEW87_01055 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEW87_01055 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEW87_01070 PF02954 Bacterial regulatory protein, Fis family CEW87_01070 PF00072 Response regulator receiver domain CEW87_01070 PF00158 Sigma-54 interaction domain CEW87_01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_01075 PF00512 His Kinase A (phospho-acceptor) domain CEW87_01075 PF02743 Cache domain CEW87_01080 PF02397 Bacterial sugar transferase CEW87_01085 PF01575 MaoC like domain CEW87_01095 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal CEW87_01095 PF02579 Dinitrogenase iron-molybdenum cofactor CEW87_01100 PF00037 4Fe-4S binding domain CEW87_01110 PF00148 Nitrogenase component 1 type Oxidoreductase CEW87_01110 PF11844 Domain of unknown function (DUF3364) CEW87_01115 PF00148 Nitrogenase component 1 type Oxidoreductase CEW87_01120 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CEW87_01125 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) CEW87_01140 PF03747 ADP-ribosylglycohydrolase CEW87_01145 PF04891 NifQ CEW87_01150 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_01155 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_01160 PF00753 Metallo-beta-lactamase superfamily CEW87_01160 PF00258 Flavodoxin CEW87_01170 PF00037 4Fe-4S binding domain CEW87_01175 PF04055 Radical SAM superfamily CEW87_01175 PF02579 Dinitrogenase iron-molybdenum cofactor CEW87_01180 PF00034 Cytochrome c CEW87_01180 PF03150 Di-haem cytochrome c peroxidase CEW87_01185 PF00158 Sigma-54 interaction domain CEW87_01185 PF13185 GAF domain CEW87_01185 PF02954 Bacterial regulatory protein, Fis family CEW87_01190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_01190 PF00989 PAS fold CEW87_01195 PF02508 Rnf-Nqr subunit, membrane protein CEW87_01200 PF04060 Putative Fe-S cluster CEW87_01205 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEW87_01205 PF13375 RnfC Barrel sandwich hybrid domain CEW87_01205 PF13237 4Fe-4S dicluster domain CEW87_01205 PF10531 SLBB domain CEW87_01210 PF03116 NQR2, RnfD, RnfE family CEW87_01215 PF04205 FMN-binding domain CEW87_01220 PF02508 Rnf-Nqr subunit, membrane protein CEW87_01225 PF03658 RnfH family Ubiquitin CEW87_01230 PF00072 Response regulator receiver domain CEW87_01235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEW87_01255 PF00448 SRP54-type protein, GTPase domain CEW87_01255 PF02978 Signal peptide binding domain CEW87_01255 PF02881 SRP54-type protein, helical bundle domain CEW87_01265 PF00571 CBS domain CEW87_01265 PF03471 Transporter associated domain CEW87_01265 PF01595 Cyclin M transmembrane N-terminal domain CEW87_01270 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CEW87_01270 PF00437 Type II/IV secretion system protein CEW87_01275 PF00482 Type II secretion system (T2SS), protein F CEW87_01280 PF01478 Type IV leader peptidase family CEW87_01280 PF06750 Bacterial Peptidase A24 N-terminal domain CEW87_01295 PF01336 OB-fold nucleic acid binding domain CEW87_01295 PF02938 GAD domain CEW87_01295 PF00152 tRNA synthetases class II (D, K and N) CEW87_01300 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CEW87_01300 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CEW87_01310 PF00209 Sodium:neurotransmitter symporter family CEW87_01315 PF01037 Lrp/AsnC ligand binding domain CEW87_01320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEW87_01325 PF01625 Peptide methionine sulfoxide reductase CEW87_01335 PF00218 Indole-3-glycerol phosphate synthase CEW87_01340 PF02885 Glycosyl transferase family, helical bundle domain CEW87_01340 PF00591 Glycosyl transferase family, a/b domain CEW87_01345 PF00117 Glutamine amidotransferase class-I CEW87_01360 PF13614 AAA domain CEW87_01395 PF00436 Single-strand binding protein family CEW87_01400 PF01131 DNA topoisomerase CEW87_01400 PF01751 Toprim domain CEW87_01455 PF06067 Domain of unknown function (DUF932) CEW87_01510 PF13361 UvrD-like helicase C-terminal domain CEW87_01510 PF00580 UvrD/REP helicase N-terminal domain CEW87_01580 PF17758 Proteasomal ATPase OB N-terminal domain CEW87_01580 PF00004 ATPase family associated with various cellular activities (AAA) CEW87_01580 PF16450 Proteasomal ATPase OB C-terminal domain CEW87_01590 PF12728 Helix-turn-helix domain CEW87_01645 PF04002 RadC-like JAB domain CEW87_01725 PF02321 Outer membrane efflux protein CEW87_01730 PF13533 Biotin-lipoyl like CEW87_01735 PF00005 ABC transporter CEW87_01750 PF00106 short chain dehydrogenase CEW87_01755 PF11339 Protein of unknown function (DUF3141) CEW87_01760 PF01515 Phosphate acetyl/butaryl transferase CEW87_01770 PF00871 Acetokinase family CEW87_01775 PF03616 Sodium/glutamate symporter CEW87_01780 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CEW87_01780 PF00561 alpha/beta hydrolase fold CEW87_01785 PF00582 Universal stress protein family CEW87_01795 PF14572 Phosphoribosyl synthetase-associated domain CEW87_01795 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CEW87_01805 PF00753 Metallo-beta-lactamase superfamily CEW87_01805 PF10996 Beta-Casp domain CEW87_01805 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CEW87_01810 PF00591 Glycosyl transferase family, a/b domain CEW87_01810 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CEW87_01810 PF02885 Glycosyl transferase family, helical bundle domain CEW87_01815 PF03466 LysR substrate binding domain CEW87_01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_01820 PF01381 Helix-turn-helix CEW87_01830 PF13356 Arm DNA-binding domain CEW87_01830 PF00589 Phage integrase family CEW87_01835 PF04715 Anthranilate synthase component I, N terminal region CEW87_01835 PF00425 chorismate binding enzyme CEW87_01840 PF13419 Haloacid dehalogenase-like hydrolase CEW87_01850 PF00437 Type II/IV secretion system protein CEW87_01850 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CEW87_01855 PF02112 cAMP phosphodiesterases class-II CEW87_01860 PF00498 FHA domain CEW87_01870 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CEW87_01875 PF00549 CoA-ligase CEW87_01875 PF02629 CoA binding domain CEW87_01880 PF08442 ATP-grasp domain CEW87_01880 PF00549 CoA-ligase CEW87_01895 PF01784 NIF3 (NGG1p interacting factor 3) CEW87_01900 PF17820 PDZ domain CEW87_01900 PF13180 PDZ domain CEW87_01905 PF00902 Sec-independent protein translocase protein (TatC) CEW87_01910 PF02416 mttA/Hcf106 family CEW87_01915 PF02416 mttA/Hcf106 family CEW87_01925 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CEW87_01930 PF01502 Phosphoribosyl-AMP cyclohydrolase CEW87_01935 PF00977 Histidine biosynthesis protein CEW87_01940 PF00977 Histidine biosynthesis protein CEW87_01945 PF00117 Glutamine amidotransferase class-I CEW87_01950 PF00475 Imidazoleglycerol-phosphate dehydratase CEW87_01955 PF00155 Aminotransferase class I and II CEW87_01960 PF00815 Histidinol dehydrogenase CEW87_01965 PF01634 ATP phosphoribosyltransferase CEW87_01970 PF01272 Transcription elongation factor, GreA/GreB, C-term CEW87_01970 PF14760 Rnk N-terminus CEW87_01975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEW87_01985 PF01061 ABC-2 type transporter CEW87_01990 PF00005 ABC transporter CEW87_02010 PF02470 MlaD protein CEW87_02015 PF02405 Permease MlaE CEW87_02020 PF00005 ABC transporter CEW87_02030 PF00437 Type II/IV secretion system protein CEW87_02035 PF00482 Type II secretion system (T2SS), protein F CEW87_02070 PF02254 TrkA-N domain CEW87_02070 PF02080 TrkA-C domain CEW87_02070 PF00999 Sodium/hydrogen exchanger family CEW87_02075 PF00571 CBS domain CEW87_02075 PF01380 SIS domain CEW87_02085 PF03968 OstA-like protein CEW87_02090 PF00378 Enoyl-CoA hydratase/isomerase CEW87_02105 PF01553 Acyltransferase CEW87_02115 PF05746 DALR anticodon binding domain CEW87_02115 PF02092 Glycyl-tRNA synthetase beta subunit CEW87_02120 PF02091 Glycyl-tRNA synthetase alpha subunit CEW87_02125 PF00795 Carbon-nitrogen hydrolase CEW87_02130 PF00571 CBS domain CEW87_02130 PF03471 Transporter associated domain CEW87_02135 PF02130 Uncharacterized protein family UPF0054 CEW87_02140 PF02562 PhoH-like protein CEW87_02145 PF01938 TRAM domain CEW87_02145 PF00919 Uncharacterized protein family UPF0004 CEW87_02145 PF04055 Radical SAM superfamily CEW87_02160 PF00990 Diguanylate cyclase, GGDEF domain CEW87_02165 PF09186 Domain of unknown function (DUF1949) CEW87_02165 PF01205 Uncharacterized protein family UPF0029 CEW87_02175 PF00296 Luciferase-like monooxygenase CEW87_02180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_02180 PF03466 LysR substrate binding domain CEW87_02185 PF14403 Circularly permuted ATP-grasp type 2 CEW87_02185 PF04168 A predicted alpha-helical domain with a conserved ER motif. CEW87_02190 PF14403 Circularly permuted ATP-grasp type 2 CEW87_02200 PF00563 EAL domain CEW87_02200 PF03707 Bacterial signalling protein N terminal repeat CEW87_02200 PF00990 Diguanylate cyclase, GGDEF domain CEW87_02205 PF01039 Carboxyl transferase domain CEW87_02215 PF00364 Biotin-requiring enzyme CEW87_02220 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CEW87_02225 PF03061 Thioesterase superfamily CEW87_02230 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_02230 PF13192 Thioredoxin domain CEW87_02235 PF10417 C-terminal domain of 1-Cys peroxiredoxin CEW87_02235 PF00578 AhpC/TSA family CEW87_02245 PF18075 FtsX extracellular domain CEW87_02250 PF00005 ABC transporter CEW87_02255 PF02881 SRP54-type protein, helical bundle domain CEW87_02255 PF00448 SRP54-type protein, GTPase domain CEW87_02260 PF05193 Peptidase M16 inactive domain CEW87_02260 PF00675 Insulinase (Peptidase family M16) CEW87_02265 PF00675 Insulinase (Peptidase family M16) CEW87_02265 PF05193 Peptidase M16 inactive domain CEW87_02275 PF01467 Cytidylyltransferase-like CEW87_02280 PF00037 4Fe-4S binding domain CEW87_02285 PF00350 Dynamin family CEW87_02290 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CEW87_02290 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CEW87_02290 PF06827 Zinc finger found in FPG and IleRS CEW87_02300 PF03550 Outer membrane lipoprotein LolB CEW87_02305 PF08544 GHMP kinases C terminal CEW87_02305 PF00288 GHMP kinases N terminal domain CEW87_02315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CEW87_02315 PF14572 Phosphoribosyl synthetase-associated domain CEW87_02320 PF14693 Ribosomal protein TL5, C-terminal domain CEW87_02320 PF01386 Ribosomal L25p family CEW87_02325 PF01195 Peptidyl-tRNA hydrolase CEW87_02330 PF06071 Protein of unknown function (DUF933) CEW87_02330 PF01926 50S ribosome-binding GTPase CEW87_02335 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CEW87_02340 PF00361 Proton-conducting membrane transporter CEW87_02340 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CEW87_02340 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CEW87_02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_02345 PF03466 LysR substrate binding domain CEW87_02350 PF00730 HhH-GPD superfamily base excision DNA repair protein CEW87_02355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEW87_02355 PF12833 Helix-turn-helix domain CEW87_02355 PF02805 Metal binding domain of Ada CEW87_02355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CEW87_02360 PF02313 Fumarate reductase subunit D CEW87_02370 PF13085 2Fe-2S iron-sulfur cluster binding domain CEW87_02370 PF13183 4Fe-4S dicluster domain CEW87_02375 PF00890 FAD binding domain CEW87_02375 PF02910 Fumarate reductase flavoprotein C-term CEW87_02385 PF00072 Response regulator receiver domain CEW87_02390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_02390 PF00512 His Kinase A (phospho-acceptor) domain CEW87_02395 PF18793 Nitrous oxide reductase propeller repeat 2 CEW87_02395 PF18764 Nitrous oxide reductase propeller repeat CEW87_02395 PF13473 Cupredoxin-like domain CEW87_02400 PF12801 4Fe-4S binding domain CEW87_02400 PF04205 FMN-binding domain CEW87_02410 PF05048 Periplasmic copper-binding protein (NosD) CEW87_02415 PF00005 ABC transporter CEW87_02420 PF12679 ABC-2 family transporter protein CEW87_02445 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEW87_02470 PF03466 LysR substrate binding domain CEW87_02470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_02475 PF06779 Uncharacterised MFS-type transporter YbfB CEW87_02490 PF01266 FAD dependent oxidoreductase CEW87_02500 PF03707 Bacterial signalling protein N terminal repeat CEW87_02500 PF00990 Diguanylate cyclase, GGDEF domain CEW87_02500 PF00563 EAL domain CEW87_02505 PF00580 UvrD/REP helicase N-terminal domain CEW87_02505 PF13361 UvrD-like helicase C-terminal domain CEW87_02505 PF00570 HRDC domain CEW87_02510 PF03466 LysR substrate binding domain CEW87_02510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_02520 PF01970 Tripartite tricarboxylate transporter TctA family CEW87_02525 PF03401 Tripartite tricarboxylate transporter family receptor CEW87_02530 PF01042 Endoribonuclease L-PSP CEW87_02535 PF01266 FAD dependent oxidoreductase CEW87_02545 PF04545 Sigma-70, region 4 CEW87_02545 PF04542 Sigma-70 region 2 CEW87_02555 PF01544 CorA-like Mg2+ transporter protein CEW87_02590 PF10091 Putative glucoamylase CEW87_02590 PF06165 Glycosyltransferase family 36 CEW87_02590 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CEW87_02605 PF01451 Low molecular weight phosphotyrosine protein phosphatase CEW87_02610 PF01758 Sodium Bile acid symporter family CEW87_02615 PF06953 Arsenical resistance operon trans-acting repressor ArsD CEW87_02620 PF02374 Anion-transporting ATPase CEW87_02625 PF03466 LysR substrate binding domain CEW87_02625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_02630 PF02678 Pirin CEW87_02630 PF17954 Quercetinase C-terminal cupin domain CEW87_02640 PF03358 NADPH-dependent FMN reductase CEW87_02650 PF00149 Calcineurin-like phosphoesterase CEW87_02655 PF00005 ABC transporter CEW87_02655 PF08402 TOBE domain CEW87_02660 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_02665 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_02670 PF01547 Bacterial extracellular solute-binding protein CEW87_02675 PF00455 DeoR C terminal sensor domain CEW87_02675 PF08220 DeoR-like helix-turn-helix domain CEW87_02680 PF00561 alpha/beta hydrolase fold CEW87_02685 PF00892 EamA-like transporter family CEW87_02690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_02690 PF03466 LysR substrate binding domain CEW87_02700 PF05231 MASE1 CEW87_02700 PF00563 EAL domain CEW87_02700 PF00990 Diguanylate cyclase, GGDEF domain CEW87_02700 PF08448 PAS fold CEW87_02700 PF08447 PAS fold CEW87_02700 PF13426 PAS domain CEW87_02720 PF00535 Glycosyl transferase family 2 CEW87_02740 PF01370 NAD dependent epimerase/dehydratase family CEW87_02750 PF00158 Sigma-54 interaction domain CEW87_02750 PF02954 Bacterial regulatory protein, Fis family CEW87_02750 PF00072 Response regulator receiver domain CEW87_02755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_02755 PF00512 His Kinase A (phospho-acceptor) domain CEW87_02765 PF00155 Aminotransferase class I and II CEW87_02770 PF01008 Initiation factor 2 subunit family CEW87_02775 PF00596 Class II Aldolase and Adducin N-terminal domain CEW87_02775 PF01008 Initiation factor 2 subunit family CEW87_02780 PF00990 Diguanylate cyclase, GGDEF domain CEW87_02780 PF03707 Bacterial signalling protein N terminal repeat CEW87_02780 PF00563 EAL domain CEW87_02785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEW87_02785 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEW87_02790 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEW87_02790 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEW87_02795 PF02885 Glycosyl transferase family, helical bundle domain CEW87_02800 PF02678 Pirin CEW87_02800 PF05726 Pirin C-terminal cupin domain CEW87_02805 PF02525 Flavodoxin-like fold CEW87_02810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_02810 PF03466 LysR substrate binding domain CEW87_02815 PF02600 Disulfide bond formation protein DsbB CEW87_02830 PF00873 AcrB/AcrD/AcrF family CEW87_02845 PF00899 ThiF family CEW87_02855 PF00155 Aminotransferase class I and II CEW87_02860 PF00563 EAL domain CEW87_02860 PF00990 Diguanylate cyclase, GGDEF domain CEW87_02860 PF03707 Bacterial signalling protein N terminal repeat CEW87_02865 PF00072 Response regulator receiver domain CEW87_02870 PF01590 GAF domain CEW87_02870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_02870 PF00512 His Kinase A (phospho-acceptor) domain CEW87_02870 PF00360 Phytochrome region CEW87_02870 PF08446 PAS fold CEW87_02880 PF00436 Single-strand binding protein family CEW87_02885 PF07690 Major Facilitator Superfamily CEW87_02890 PF17755 UvrA DNA-binding domain CEW87_02890 PF17760 UvrA interaction domain CEW87_02900 PF16363 GDP-mannose 4,6 dehydratase CEW87_02905 PF01196 Ribosomal protein L17 CEW87_02910 PF01000 RNA polymerase Rpb3/RpoA insert domain CEW87_02910 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CEW87_02910 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CEW87_02915 PF01479 S4 domain CEW87_02915 PF00163 Ribosomal protein S4/S9 N-terminal domain CEW87_02920 PF00411 Ribosomal protein S11 CEW87_02925 PF00416 Ribosomal protein S13/S18 CEW87_02930 PF00444 Ribosomal protein L36 CEW87_02935 PF00344 SecY translocase CEW87_02940 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CEW87_02945 PF00327 Ribosomal protein L30p/L7e CEW87_02950 PF00333 Ribosomal protein S5, N-terminal domain CEW87_02950 PF03719 Ribosomal protein S5, C-terminal domain CEW87_02955 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CEW87_02960 PF00347 Ribosomal protein L6 CEW87_02965 PF00410 Ribosomal protein S8 CEW87_02970 PF00253 Ribosomal protein S14p/S29e CEW87_02975 PF00281 Ribosomal protein L5 CEW87_02975 PF00673 ribosomal L5P family C-terminus CEW87_02980 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CEW87_02985 PF00238 Ribosomal protein L14p/L23e CEW87_02990 PF00366 Ribosomal protein S17 CEW87_02995 PF00831 Ribosomal L29 protein CEW87_03000 PF00252 Ribosomal protein L16p/L10e CEW87_03005 PF07650 KH domain CEW87_03005 PF00189 Ribosomal protein S3, C-terminal domain CEW87_03010 PF00237 Ribosomal protein L22p/L17e CEW87_03015 PF00203 Ribosomal protein S19 CEW87_03020 PF03947 Ribosomal Proteins L2, C-terminal domain CEW87_03020 PF00181 Ribosomal Proteins L2, RNA binding domain CEW87_03025 PF00276 Ribosomal protein L23 CEW87_03030 PF00573 Ribosomal protein L4/L1 family CEW87_03035 PF00297 Ribosomal protein L3 CEW87_03040 PF00338 Ribosomal protein S10p/S20e CEW87_03045 PF00009 Elongation factor Tu GTP binding domain CEW87_03045 PF03144 Elongation factor Tu domain 2 CEW87_03045 PF03143 Elongation factor Tu C-terminal domain CEW87_03050 PF00009 Elongation factor Tu GTP binding domain CEW87_03050 PF03144 Elongation factor Tu domain 2 CEW87_03050 PF00679 Elongation factor G C-terminus CEW87_03050 PF03764 Elongation factor G, domain IV CEW87_03050 PF14492 Elongation Factor G, domain II CEW87_03055 PF00177 Ribosomal protein S7p/S5e CEW87_03060 PF00164 Ribosomal protein S12/S23 CEW87_03065 PF04997 RNA polymerase Rpb1, domain 1 CEW87_03065 PF04998 RNA polymerase Rpb1, domain 5 CEW87_03065 PF05000 RNA polymerase Rpb1, domain 4 CEW87_03065 PF04983 RNA polymerase Rpb1, domain 3 CEW87_03065 PF00623 RNA polymerase Rpb1, domain 2 CEW87_03070 PF04561 RNA polymerase Rpb2, domain 2 CEW87_03070 PF04563 RNA polymerase beta subunit CEW87_03070 PF10385 RNA polymerase beta subunit external 1 domain CEW87_03070 PF00562 RNA polymerase Rpb2, domain 6 CEW87_03070 PF04560 RNA polymerase Rpb2, domain 7 CEW87_03070 PF04565 RNA polymerase Rpb2, domain 3 CEW87_03075 PF16320 Ribosomal protein L7/L12 dimerisation domain CEW87_03075 PF00542 Ribosomal protein L7/L12 C-terminal domain CEW87_03080 PF00466 Ribosomal protein L10 CEW87_03085 PF00687 Ribosomal protein L1p/L10e family CEW87_03090 PF00298 Ribosomal protein L11, RNA binding domain CEW87_03090 PF03946 Ribosomal protein L11, N-terminal domain CEW87_03095 PF00467 KOW motif CEW87_03095 PF02357 Transcription termination factor nusG CEW87_03100 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CEW87_03110 PF03143 Elongation factor Tu C-terminal domain CEW87_03110 PF00009 Elongation factor Tu GTP binding domain CEW87_03110 PF03144 Elongation factor Tu domain 2 CEW87_03135 PF00664 ABC transporter transmembrane region CEW87_03135 PF00005 ABC transporter CEW87_03150 PF02254 TrkA-N domain CEW87_03150 PF00999 Sodium/hydrogen exchanger family CEW87_03155 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW87_03160 PF17763 Glutaminase/Asparaginase C-terminal domain CEW87_03160 PF00710 Asparaginase, N-terminal CEW87_03165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_03165 PF03466 LysR substrate binding domain CEW87_03170 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEW87_03170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEW87_03180 PF01507 Phosphoadenosine phosphosulfate reductase family CEW87_03185 PF01507 Phosphoadenosine phosphosulfate reductase family CEW87_03190 PF00009 Elongation factor Tu GTP binding domain CEW87_03195 PF17113 Regulatory signalling modulator protein AmpE CEW87_03195 PF03186 CobD/Cbib protein CEW87_03200 PF00155 Aminotransferase class I and II CEW87_03205 PF01497 Periplasmic binding protein CEW87_03215 PF01435 Peptidase family M48 CEW87_03220 PF00271 Helicase conserved C-terminal domain CEW87_03220 PF00270 DEAD/DEAH box helicase CEW87_03225 PF00881 Nitroreductase family CEW87_03235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW87_03240 PF01903 CbiX CEW87_03245 PF02570 Precorrin-8X methylmutase CEW87_03250 PF01888 CbiD CEW87_03255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW87_03260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW87_03265 PF01890 Cobalamin synthesis G C-terminus CEW87_03265 PF11760 Cobalamin synthesis G N-terminal CEW87_03265 PF11761 Cobalamin biosynthesis central region CEW87_03275 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEW87_03275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW87_03285 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CEW87_03285 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CEW87_03295 PF00114 Pilin (bacterial filament) CEW87_03295 PF07963 Prokaryotic N-terminal methylation motif CEW87_03305 PF00194 Eukaryotic-type carbonic anhydrase CEW87_03310 PF00155 Aminotransferase class I and II CEW87_03310 PF00392 Bacterial regulatory proteins, gntR family CEW87_03320 PF00440 Bacterial regulatory proteins, tetR family CEW87_03330 PF00873 AcrB/AcrD/AcrF family CEW87_03340 PF00581 Rhodanese-like domain CEW87_03345 PF02321 Outer membrane efflux protein CEW87_03350 PF00486 Transcriptional regulatory protein, C terminal CEW87_03350 PF00072 Response regulator receiver domain CEW87_03355 PF00512 His Kinase A (phospho-acceptor) domain CEW87_03355 PF00672 HAMP domain CEW87_03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_03370 PF03352 Methyladenine glycosylase CEW87_03380 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CEW87_03380 PF00591 Glycosyl transferase family, a/b domain CEW87_03380 PF02885 Glycosyl transferase family, helical bundle domain CEW87_03385 PF00012 Hsp70 protein CEW87_03390 PF03060 Nitronate monooxygenase CEW87_03395 PF00990 Diguanylate cyclase, GGDEF domain CEW87_03395 PF00563 EAL domain CEW87_03395 PF03707 Bacterial signalling protein N terminal repeat CEW87_03420 PF00072 Response regulator receiver domain CEW87_03435 PF00989 PAS fold CEW87_03435 PF08447 PAS fold CEW87_03435 PF00512 His Kinase A (phospho-acceptor) domain CEW87_03435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_03440 PF02566 OsmC-like protein CEW87_03450 PF03737 Aldolase/RraA CEW87_03455 PF03401 Tripartite tricarboxylate transporter family receptor CEW87_03465 PF01970 Tripartite tricarboxylate transporter TctA family CEW87_03470 PF00171 Aldehyde dehydrogenase family CEW87_03480 PF07729 FCD domain CEW87_03480 PF00392 Bacterial regulatory proteins, gntR family CEW87_03485 PF00881 Nitroreductase family CEW87_03495 PF03466 LysR substrate binding domain CEW87_03495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_03510 PF00990 Diguanylate cyclase, GGDEF domain CEW87_03510 PF00072 Response regulator receiver domain CEW87_03520 PF01627 Hpt domain CEW87_03520 PF00512 His Kinase A (phospho-acceptor) domain CEW87_03520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_03520 PF00072 Response regulator receiver domain CEW87_03520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEW87_03520 PF00672 HAMP domain CEW87_03550 PF01380 SIS domain CEW87_03555 PF12804 MobA-like NTP transferase domain CEW87_03555 PF00132 Bacterial transferase hexapeptide (six repeats) CEW87_03560 PF01515 Phosphate acetyl/butaryl transferase CEW87_03565 PF00871 Acetokinase family CEW87_03575 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_03575 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEW87_03580 PF01645 Conserved region in glutamate synthase CEW87_03580 PF00310 Glutamine amidotransferases class-II CEW87_03580 PF01493 GXGXG motif CEW87_03580 PF04898 Glutamate synthase central domain CEW87_03585 PF13286 Phosphohydrolase-associated domain CEW87_03585 PF01966 HD domain CEW87_03590 PF01761 3-dehydroquinate synthase CEW87_03595 PF01202 Shikimate kinase CEW87_03600 PF00263 Bacterial type II and III secretion system protein CEW87_03600 PF11741 AMIN domain CEW87_03600 PF07660 Secretin and TonB N terminus short domain CEW87_03600 PF03958 Bacterial type II/III secretion system short domain CEW87_03625 PF00905 Penicillin binding protein transpeptidase domain CEW87_03625 PF00912 Transglycosylase CEW87_03625 PF17092 Penicillin-binding protein OB-like domain CEW87_03630 PF01491 Frataxin-like domain CEW87_03640 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CEW87_03640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CEW87_03650 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CEW87_03660 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CEW87_03665 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CEW87_03670 PF01040 UbiA prenyltransferase family CEW87_03675 PF00270 DEAD/DEAH box helicase CEW87_03675 PF00271 Helicase conserved C-terminal domain CEW87_03675 PF17191 RecG wedge domain CEW87_03680 PF01042 Endoribonuclease L-PSP CEW87_03685 PF02623 FliW protein CEW87_03705 PF00378 Enoyl-CoA hydratase/isomerase CEW87_03710 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_03710 PF00970 Oxidoreductase FAD-binding domain CEW87_03710 PF00175 Oxidoreductase NAD-binding domain CEW87_03715 PF02508 Rnf-Nqr subunit, membrane protein CEW87_03720 PF02508 Rnf-Nqr subunit, membrane protein CEW87_03725 PF04205 FMN-binding domain CEW87_03730 PF03116 NQR2, RnfD, RnfE family CEW87_03735 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CEW87_03735 PF11973 NQRA C-terminal domain CEW87_03740 PF02803 Thiolase, C-terminal domain CEW87_03740 PF00108 Thiolase, N-terminal domain CEW87_03745 PF00378 Enoyl-CoA hydratase/isomerase CEW87_03745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW87_03745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW87_03750 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CEW87_03760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW87_03760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW87_03760 PF00378 Enoyl-CoA hydratase/isomerase CEW87_03765 PF02803 Thiolase, C-terminal domain CEW87_03765 PF00108 Thiolase, N-terminal domain CEW87_03770 PF09317 Domain of unknown function (DUF1974) CEW87_03770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW87_03770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW87_03775 PF08361 MAATS-type transcriptional repressor, C-terminal region CEW87_03775 PF00440 Bacterial regulatory proteins, tetR family CEW87_03795 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEW87_03795 PF07683 Cobalamin synthesis protein cobW C-terminal domain CEW87_03800 PF02913 FAD linked oxidases, C-terminal domain CEW87_03800 PF01565 FAD binding domain CEW87_03820 PF00196 Bacterial regulatory proteins, luxR family CEW87_03820 PF00072 Response regulator receiver domain CEW87_03825 PF00593 TonB dependent receptor CEW87_03825 PF07715 TonB-dependent Receptor Plug Domain CEW87_03835 PF00672 HAMP domain CEW87_03835 PF00072 Response regulator receiver domain CEW87_03835 PF01627 Hpt domain CEW87_03835 PF00512 His Kinase A (phospho-acceptor) domain CEW87_03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_03845 PF02515 CoA-transferase family III CEW87_03855 PF00005 ABC transporter CEW87_03870 PF02653 Branched-chain amino acid transport system / permease component CEW87_03875 PF00005 ABC transporter CEW87_03875 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW87_03880 PF00501 AMP-binding enzyme CEW87_03985 PF03237 Terminase-like family CEW87_04030 PF01510 N-acetylmuramoyl-L-alanine amidase CEW87_04070 PF13401 AAA domain CEW87_04070 PF01471 Putative peptidoglycan binding domain CEW87_04090 PF07352 Bacteriophage Mu Gam like protein CEW87_04120 PF01642 Methylmalonyl-CoA mutase CEW87_04120 PF02310 B12 binding domain CEW87_04125 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CEW87_04125 PF12833 Helix-turn-helix domain CEW87_04130 PF00072 Response regulator receiver domain CEW87_04130 PF13188 PAS domain CEW87_04130 PF08448 PAS fold CEW87_04130 PF00512 His Kinase A (phospho-acceptor) domain CEW87_04130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_04135 PF00072 Response regulator receiver domain CEW87_04135 PF00486 Transcriptional regulatory protein, C terminal CEW87_04145 PF04228 Putative neutral zinc metallopeptidase CEW87_04150 PF04055 Radical SAM superfamily CEW87_04150 PF12544 Lysine-2,3-aminomutase CEW87_04155 PF00563 EAL domain CEW87_04155 PF03707 Bacterial signalling protein N terminal repeat CEW87_04155 PF00990 Diguanylate cyclase, GGDEF domain CEW87_04160 PF00289 Biotin carboxylase, N-terminal domain CEW87_04160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEW87_04160 PF02785 Biotin carboxylase C-terminal domain CEW87_04165 PF01039 Carboxyl transferase domain CEW87_04175 PF01642 Methylmalonyl-CoA mutase CEW87_04175 PF02310 B12 binding domain CEW87_04180 PF00392 Bacterial regulatory proteins, gntR family CEW87_04180 PF07729 FCD domain CEW87_04185 PF00571 CBS domain CEW87_04185 PF03471 Transporter associated domain CEW87_04185 PF01595 Cyclin M transmembrane N-terminal domain CEW87_04190 PF00206 Lyase CEW87_04190 PF10415 Fumarase C C-terminus CEW87_04195 PF00474 Sodium:solute symporter family CEW87_04200 PF04341 Protein of unknown function, DUF485 CEW87_04205 PF00378 Enoyl-CoA hydratase/isomerase CEW87_04210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEW87_04210 PF07685 CobB/CobQ-like glutamine amidotransferase domain CEW87_04215 PF00140 Sigma-70 factor, region 1.2 CEW87_04215 PF04542 Sigma-70 region 2 CEW87_04215 PF04545 Sigma-70, region 4 CEW87_04220 PF02630 SCO1/SenC CEW87_04225 PF01040 UbiA prenyltransferase family CEW87_04250 PF00510 Cytochrome c oxidase subunit III CEW87_04260 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CEW87_04265 PF00115 Cytochrome C and Quinol oxidase polypeptide I CEW87_04270 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CEW87_04270 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CEW87_04280 PF00106 short chain dehydrogenase CEW87_04315 PF02649 Type I GTP cyclohydrolase folE2 CEW87_04320 PF00255 Glutathione peroxidase CEW87_04330 PF02607 B12 binding domain CEW87_04330 PF13411 MerR HTH family regulatory protein CEW87_04345 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEW87_04350 PF13380 CoA binding domain CEW87_04375 PF13091 PLD-like domain CEW87_04380 PF03372 Endonuclease/Exonuclease/phosphatase family CEW87_04385 PF02445 Quinolinate synthetase A protein CEW87_04395 PF16916 Dimerisation domain of Zinc Transporter CEW87_04395 PF01545 Cation efflux family CEW87_04410 PF00989 PAS fold CEW87_04410 PF00512 His Kinase A (phospho-acceptor) domain CEW87_04410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_04415 PF00158 Sigma-54 interaction domain CEW87_04415 PF00072 Response regulator receiver domain CEW87_04415 PF02954 Bacterial regulatory protein, Fis family CEW87_04420 PF02237 Biotin protein ligase C terminal domain CEW87_04420 PF03099 Biotin/lipoate A/B protein ligase family CEW87_04425 PF03309 Type III pantothenate kinase CEW87_04435 PF01121 Dephospho-CoA kinase CEW87_04440 PF07072 Cell division protein CEW87_04445 PF03884 DNA gyrase inhibitor YacG CEW87_04450 PF00293 NUDIX domain CEW87_04460 PF03562 MltA specific insert domain CEW87_04460 PF06725 3D domain CEW87_04465 PF10411 Disulfide bond isomerase protein N-terminus CEW87_04465 PF13098 Thioredoxin-like domain CEW87_04470 PF01494 FAD binding domain CEW87_04500 PF03796 DnaB-like helicase C terminal domain CEW87_04500 PF00772 DnaB-like helicase N terminal domain CEW87_04505 PF01281 Ribosomal protein L9, N-terminal domain CEW87_04505 PF03948 Ribosomal protein L9, C-terminal domain CEW87_04510 PF01084 Ribosomal protein S18 CEW87_04520 PF01250 Ribosomal protein S6 CEW87_04530 PF00271 Helicase conserved C-terminal domain CEW87_04530 PF11898 Domain of unknown function (DUF3418) CEW87_04530 PF04408 Helicase associated domain (HA2) CEW87_04530 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CEW87_04530 PF00270 DEAD/DEAH box helicase CEW87_04545 PF03692 Putative zinc- or iron-chelating domain CEW87_04550 PF02673 Bacitracin resistance protein BacA CEW87_04555 PF05728 Uncharacterised protein family (UPF0227) CEW87_04560 PF01209 ubiE/COQ5 methyltransferase family CEW87_04565 PF00892 EamA-like transporter family CEW87_04570 PF00773 RNB domain CEW87_04580 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CEW87_04580 PF01488 Shikimate / quinate 5-dehydrogenase CEW87_04580 PF08501 Shikimate dehydrogenase substrate binding domain CEW87_04585 PF00912 Transglycosylase CEW87_04590 PF01769 Divalent cation transporter CEW87_04590 PF00571 CBS domain CEW87_04590 PF03448 MgtE intracellular N domain CEW87_04595 PF01169 Uncharacterized protein family UPF0016 CEW87_04600 PF00202 Aminotransferase class-III CEW87_04605 PF02581 Thiamine monophosphate synthase CEW87_04615 PF00301 Rubredoxin CEW87_04620 PF00072 Response regulator receiver domain CEW87_04625 PF00072 Response regulator receiver domain CEW87_04635 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CEW87_04635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW87_04640 PF07194 P2 response regulator binding domain CEW87_04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_04640 PF02895 Signal transducing histidine kinase, homodimeric domain CEW87_04640 PF01627 Hpt domain CEW87_04640 PF01584 CheW-like domain CEW87_04645 PF03441 FAD binding domain of DNA photolyase CEW87_04645 PF00875 DNA photolyase CEW87_04650 PF02622 Uncharacterized ACR, COG1678 CEW87_04655 PF03652 Holliday junction resolvase CEW87_04660 PF00156 Phosphoribosyl transferase domain CEW87_04665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEW87_04665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEW87_04670 PF01979 Amidohydrolase family CEW87_04675 PF02594 Uncharacterised ACR, YggU family COG1872 CEW87_04680 PF02325 YGGT family CEW87_04685 PF03807 NADP oxidoreductase coenzyme F420-dependent CEW87_04685 PF14748 Pyrroline-5-carboxylate reductase dimerisation CEW87_04690 PF01168 Alanine racemase, N-terminal domain CEW87_04695 PF00437 Type II/IV secretion system protein CEW87_04700 PF00437 Type II/IV secretion system protein CEW87_04705 PF01170 Putative RNA methylase family UPF0020 CEW87_04705 PF02926 THUMP domain CEW87_04725 PF13247 4Fe-4S dicluster domain CEW87_04730 PF00384 Molybdopterin oxidoreductase CEW87_04730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEW87_04730 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CEW87_04730 PF12838 4Fe-4S dicluster domain CEW87_04730 PF01568 Molydopterin dinucleotide binding domain CEW87_04765 PF02634 FdhD/NarQ family CEW87_04770 PF12804 MobA-like NTP transferase domain CEW87_04780 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CEW87_04785 PF00512 His Kinase A (phospho-acceptor) domain CEW87_04785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_04785 PF00989 PAS fold CEW87_04785 PF08447 PAS fold CEW87_04790 PF00158 Sigma-54 interaction domain CEW87_04790 PF00072 Response regulator receiver domain CEW87_04790 PF02954 Bacterial regulatory protein, Fis family CEW87_04805 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_04805 PF00175 Oxidoreductase NAD-binding domain CEW87_04805 PF00970 Oxidoreductase FAD-binding domain CEW87_04810 PF08668 HDOD domain CEW87_04810 PF00563 EAL domain CEW87_04815 PF00512 His Kinase A (phospho-acceptor) domain CEW87_04815 PF13188 PAS domain CEW87_04815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_04815 PF13426 PAS domain CEW87_04815 PF00989 PAS fold CEW87_04820 PF00563 EAL domain CEW87_04820 PF00990 Diguanylate cyclase, GGDEF domain CEW87_04820 PF03707 Bacterial signalling protein N terminal repeat CEW87_04825 PF00034 Cytochrome c CEW87_04830 PF00459 Inositol monophosphatase family CEW87_04840 PF00005 ABC transporter CEW87_04840 PF08402 TOBE domain CEW87_04845 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_04855 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CEW87_04860 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CEW87_04865 PF00355 Rieske [2Fe-2S] domain CEW87_04870 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEW87_04875 PF01730 UreF CEW87_04880 PF02814 UreE urease accessory protein, N-terminal domain CEW87_04880 PF05194 UreE urease accessory protein, C-terminal domain CEW87_04885 PF00449 Urease alpha-subunit, N-terminal domain CEW87_04885 PF01979 Amidohydrolase family CEW87_04890 PF00699 Urease beta subunit CEW87_04900 PF00547 Urease, gamma subunit CEW87_04905 PF01774 UreD urease accessory protein CEW87_04910 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CEW87_04910 PF14489 QueF-like protein CEW87_04915 PF00916 Sulfate permease family CEW87_04915 PF01740 STAS domain CEW87_04925 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CEW87_04925 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CEW87_04930 PF03459 TOBE domain CEW87_04930 PF00005 ABC transporter CEW87_04935 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_04945 PF03459 TOBE domain CEW87_04945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_04950 PF03459 TOBE domain CEW87_04960 PF03502 Nucleoside-specific channel-forming protein, Tsx CEW87_04965 PF09084 NMT1/THI5 like CEW87_04970 PF00005 ABC transporter CEW87_04975 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_04985 PF03707 Bacterial signalling protein N terminal repeat CEW87_04985 PF00990 Diguanylate cyclase, GGDEF domain CEW87_04985 PF00563 EAL domain CEW87_04995 PF00005 ABC transporter CEW87_05000 PF00005 ABC transporter CEW87_05000 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW87_05010 PF02653 Branched-chain amino acid transport system / permease component CEW87_05030 PF03922 OmpW family CEW87_05035 PF03880 DbpA RNA binding domain CEW87_05035 PF00270 DEAD/DEAH box helicase CEW87_05035 PF00271 Helicase conserved C-terminal domain CEW87_05045 PF01863 Protein of unknown function DUF45 CEW87_05050 PF00664 ABC transporter transmembrane region CEW87_05050 PF00005 ABC transporter CEW87_05055 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_05055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEW87_05060 PF00072 Response regulator receiver domain CEW87_05065 PF00072 Response regulator receiver domain CEW87_05065 PF01627 Hpt domain CEW87_05065 PF18415 Histidine kinase receptor ArcB trans-membrane domain CEW87_05065 PF00512 His Kinase A (phospho-acceptor) domain CEW87_05065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_05065 PF00989 PAS fold CEW87_05070 PF02321 Outer membrane efflux protein CEW87_05080 PF00563 EAL domain CEW87_05080 PF01590 GAF domain CEW87_05080 PF00990 Diguanylate cyclase, GGDEF domain CEW87_05080 PF00989 PAS fold CEW87_05095 PF00196 Bacterial regulatory proteins, luxR family CEW87_05095 PF00072 Response regulator receiver domain CEW87_05100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEW87_05100 PF00529 HlyD membrane-fusion protein of T1SS CEW87_05105 PF00664 ABC transporter transmembrane region CEW87_05105 PF00005 ABC transporter CEW87_05105 PF03412 Peptidase C39 family CEW87_05110 PF07238 PilZ domain CEW87_05125 PF00005 ABC transporter CEW87_05135 PF01475 Ferric uptake regulator family CEW87_05140 PF00005 ABC transporter CEW87_05145 PF00950 ABC 3 transport family CEW87_05150 PF01297 Zinc-uptake complex component A periplasmic CEW87_05155 PF13538 UvrD-like helicase C-terminal domain CEW87_05160 PF12705 PD-(D/E)XK nuclease superfamily CEW87_05160 PF00580 UvrD/REP helicase N-terminal domain CEW87_05160 PF13361 UvrD-like helicase C-terminal domain CEW87_05165 PF02666 Phosphatidylserine decarboxylase CEW87_05170 PF17946 RecC C-terminal domain CEW87_05175 PF12843 Putative quorum-sensing-regulated virulence factor CEW87_05180 PF01914 MarC family integral membrane protein CEW87_05190 PF01926 50S ribosome-binding GTPase CEW87_05190 PF10396 GTP-binding protein TrmE N-terminus CEW87_05190 PF12631 MnmE helical domain CEW87_05200 PF01809 Putative membrane protein insertion efficiency factor CEW87_05205 PF01258 Prokaryotic dksA/traR C4-type zinc finger CEW87_05210 PF02321 Outer membrane efflux protein CEW87_05215 PF00873 AcrB/AcrD/AcrF family CEW87_05220 PF00529 HlyD membrane-fusion protein of T1SS CEW87_05220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEW87_05225 PF00440 Bacterial regulatory proteins, tetR family CEW87_05225 PF13977 BetI-type transcriptional repressor, C-terminal CEW87_05230 PF00962 Adenosine/AMP deaminase CEW87_05235 PF02608 ABC transporter substrate-binding protein PnrA-like CEW87_05250 PF13476 AAA domain CEW87_05255 PF00149 Calcineurin-like phosphoesterase CEW87_05255 PF12320 Type 5 capsule protein repressor C-terminal domain CEW87_05270 PF00106 short chain dehydrogenase CEW87_05280 PF01894 Uncharacterised protein family UPF0047 CEW87_05285 PF00873 AcrB/AcrD/AcrF family CEW87_05290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEW87_05295 PF01343 Peptidase family S49 CEW87_05300 PF02390 Putative methyltransferase CEW87_05305 PF05690 Thiazole biosynthesis protein ThiG CEW87_05310 PF05690 Thiazole biosynthesis protein ThiG CEW87_05310 PF02597 ThiS family CEW87_05315 PF00561 alpha/beta hydrolase fold CEW87_05325 PF00005 ABC transporter CEW87_05330 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_05335 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_05340 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW87_05350 PF00563 EAL domain CEW87_05350 PF03707 Bacterial signalling protein N terminal repeat CEW87_05350 PF00990 Diguanylate cyclase, GGDEF domain CEW87_05355 PF07690 Major Facilitator Superfamily CEW87_05375 PF00484 Carbonic anhydrase CEW87_05380 PF00480 ROK family CEW87_05385 PF00270 DEAD/DEAH box helicase CEW87_05385 PF00271 Helicase conserved C-terminal domain CEW87_05385 PF17764 3′ DNA-binding domain (3′BD) CEW87_05385 PF18074 Primosomal protein N C-terminal domain CEW87_05385 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CEW87_05390 PF01208 Uroporphyrinogen decarboxylase (URO-D) CEW87_05395 PF02386 Cation transport protein CEW87_05400 PF02080 TrkA-C domain CEW87_05400 PF02254 TrkA-N domain CEW87_05405 PF00158 Sigma-54 interaction domain CEW87_05405 PF00072 Response regulator receiver domain CEW87_05405 PF02954 Bacterial regulatory protein, Fis family CEW87_05410 PF00989 PAS fold CEW87_05410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_05410 PF00512 His Kinase A (phospho-acceptor) domain CEW87_05410 PF00672 HAMP domain CEW87_05420 PF01189 16S rRNA methyltransferase RsmB/F CEW87_05420 PF01029 NusB family CEW87_05425 PF01925 Sulfite exporter TauE/SafE CEW87_05430 PF13649 Methyltransferase domain CEW87_05440 PF12631 MnmE helical domain CEW87_05440 PF10396 GTP-binding protein TrmE N-terminus CEW87_05440 PF01926 50S ribosome-binding GTPase CEW87_05445 PF14849 YidC periplasmic domain CEW87_05445 PF02096 60Kd inner membrane protein CEW87_05450 PF00825 Ribonuclease P CEW87_05455 PF00468 Ribosomal protein L34 CEW87_05460 PF00308 Bacterial dnaA protein CEW87_05460 PF08299 Bacterial dnaA protein helix-turn-helix CEW87_05460 PF11638 DnaA N-terminal domain CEW87_05465 PF02767 DNA polymerase III beta subunit, central domain CEW87_05465 PF00712 DNA polymerase III beta subunit, N-terminal domain CEW87_05465 PF02768 DNA polymerase III beta subunit, C-terminal domain CEW87_05470 PF01751 Toprim domain CEW87_05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_05470 PF18053 DNA gyrase B subunit insert domain CEW87_05470 PF00986 DNA gyrase B subunit, carboxyl terminus CEW87_05470 PF00204 DNA gyrase B CEW87_05510 PF00271 Helicase conserved C-terminal domain CEW87_05510 PF12137 RNA polymerase recycling family C-terminal CEW87_05510 PF00176 SNF2 family N-terminal domain CEW87_05510 PF18339 RapA N-terminal Tudor like domain 1 CEW87_05510 PF18337 RapA N-terminal Tudor like domain CEW87_05515 PF00145 C-5 cytosine-specific DNA methylase CEW87_05525 PF13438 Domain of unknown function (DUF4113) CEW87_05525 PF11799 impB/mucB/samB family C-terminal domain CEW87_05525 PF00817 impB/mucB/samB family CEW87_05560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEW87_05590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_05590 PF03466 LysR substrate binding domain CEW87_05600 PF13840 ACT domain CEW87_05600 PF00696 Amino acid kinase family CEW87_05605 PF02615 Malate/L-lactate dehydrogenase CEW87_05610 PF00005 ABC transporter CEW87_05615 PF01061 ABC-2 type transporter CEW87_05625 PF00990 Diguanylate cyclase, GGDEF domain CEW87_05625 PF00563 EAL domain CEW87_05625 PF03707 Bacterial signalling protein N terminal repeat CEW87_05630 PF03466 LysR substrate binding domain CEW87_05630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_05650 PF03060 Nitronate monooxygenase CEW87_05660 PF08212 Lipocalin-like domain CEW87_05675 PF00563 EAL domain CEW87_05675 PF00990 Diguanylate cyclase, GGDEF domain CEW87_05675 PF03707 Bacterial signalling protein N terminal repeat CEW87_05690 PF00392 Bacterial regulatory proteins, gntR family CEW87_05690 PF00155 Aminotransferase class I and II CEW87_05695 PF00005 ABC transporter CEW87_05695 PF08402 TOBE domain CEW87_05705 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_05710 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_05715 PF00171 Aldehyde dehydrogenase family CEW87_05720 PF00202 Aminotransferase class-III CEW87_05725 PF03741 Integral membrane protein TerC family CEW87_05730 PF03746 LamB/YcsF family CEW87_05735 PF02626 Carboxyltransferase domain, subdomain A and B CEW87_05740 PF02682 Carboxyltransferase domain, subdomain C and D CEW87_05760 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_05765 PF00210 Ferritin-like domain CEW87_05770 PF03466 LysR substrate binding domain CEW87_05770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_05775 PF00593 TonB dependent receptor CEW87_05775 PF07715 TonB-dependent Receptor Plug Domain CEW87_05780 PF13180 PDZ domain CEW87_05785 PF00990 Diguanylate cyclase, GGDEF domain CEW87_05790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW87_05790 PF00672 HAMP domain CEW87_05795 PF01322 Cytochrome C' CEW87_05805 PF17760 UvrA interaction domain CEW87_05805 PF17755 UvrA DNA-binding domain CEW87_05805 PF00005 ABC transporter CEW87_05815 PF09285 Elongation factor P, C-terminal CEW87_05815 PF08207 Elongation factor P (EF-P) KOW-like domain CEW87_05815 PF01132 Elongation factor P (EF-P) OB domain CEW87_05825 PF01479 S4 domain CEW87_05825 PF00849 RNA pseudouridylate synthase CEW87_05835 PF04381 Putative exonuclease, RdgC CEW87_05840 PF00465 Iron-containing alcohol dehydrogenase CEW87_05845 PF00171 Aldehyde dehydrogenase family CEW87_05855 PF00465 Iron-containing alcohol dehydrogenase CEW87_05860 PF00005 ABC transporter CEW87_05865 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW87_05865 PF00005 ABC transporter CEW87_05875 PF02653 Branched-chain amino acid transport system / permease component CEW87_05890 PF02954 Bacterial regulatory protein, Fis family CEW87_05890 PF00072 Response regulator receiver domain CEW87_05890 PF00158 Sigma-54 interaction domain CEW87_05895 PF00989 PAS fold CEW87_05895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_05895 PF00512 His Kinase A (phospho-acceptor) domain CEW87_05905 PF16658 Class II release factor RF3, C-terminal domain CEW87_05905 PF03144 Elongation factor Tu domain 2 CEW87_05905 PF00009 Elongation factor Tu GTP binding domain CEW87_05910 PF01751 Toprim domain CEW87_05910 PF01131 DNA topoisomerase CEW87_05915 PF04361 Protein of unknown function (DUF494) CEW87_05920 PF02481 DNA recombination-mediator protein A CEW87_05920 PF17782 DprA winged helix domain CEW87_05930 PF01327 Polypeptide deformylase CEW87_05935 PF00551 Formyl transferase CEW87_05935 PF02911 Formyl transferase, C-terminal domain CEW87_05940 PF01435 Peptidase family M48 CEW87_05945 PF00578 AhpC/TSA family CEW87_05950 PF01841 Transglutaminase-like superfamily CEW87_05960 PF08534 Redoxin CEW87_05965 PF00392 Bacterial regulatory proteins, gntR family CEW87_05965 PF00155 Aminotransferase class I and II CEW87_05970 PF00563 EAL domain CEW87_05970 PF00990 Diguanylate cyclase, GGDEF domain CEW87_05970 PF03707 Bacterial signalling protein N terminal repeat CEW87_05975 PF00072 Response regulator receiver domain CEW87_05975 PF00512 His Kinase A (phospho-acceptor) domain CEW87_05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_05975 PF09308 LuxQ, periplasmic CEW87_05985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEW87_05985 PF00529 HlyD membrane-fusion protein of T1SS CEW87_05990 PF01043 SecA preprotein cross-linking domain CEW87_05990 PF07517 SecA DEAD-like domain CEW87_06010 PF01048 Phosphorylase superfamily CEW87_06010 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CEW87_06020 PF00175 Oxidoreductase NAD-binding domain CEW87_06020 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_06020 PF00970 Oxidoreductase FAD-binding domain CEW87_06030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_06030 PF03466 LysR substrate binding domain CEW87_06035 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CEW87_06035 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CEW87_06040 PF01063 Amino-transferase class IV CEW87_06045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_06045 PF03466 LysR substrate binding domain CEW87_06065 PF13545 Crp-like helix-turn-helix domain CEW87_06065 PF00027 Cyclic nucleotide-binding domain CEW87_06085 PF13091 PLD-like domain CEW87_06090 PF03358 NADPH-dependent FMN reductase CEW87_06095 PF03960 ArsC family CEW87_06115 PF01434 Peptidase family M41 CEW87_06115 PF17862 AAA+ lid domain CEW87_06115 PF00004 ATPase family associated with various cellular activities (AAA) CEW87_06115 PF06480 FtsH Extracellular CEW87_06140 PF02321 Outer membrane efflux protein CEW87_06145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEW87_06150 PF00005 ABC transporter CEW87_06150 PF12704 MacB-like periplasmic core domain CEW87_06150 PF02687 FtsX-like permease family CEW87_06155 PF02687 FtsX-like permease family CEW87_06155 PF12704 MacB-like periplasmic core domain CEW87_06155 PF00005 ABC transporter CEW87_06160 PF04055 Radical SAM superfamily CEW87_06160 PF13186 Iron-sulfur cluster-binding domain CEW87_06165 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CEW87_06170 PF03070 TENA/THI-4/PQQC family CEW87_06175 PF12706 Beta-lactamase superfamily domain CEW87_06180 PF08042 PqqA family CEW87_06185 PF00561 alpha/beta hydrolase fold CEW87_06195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_06195 PF03466 LysR substrate binding domain CEW87_06200 PF00072 Response regulator receiver domain CEW87_06210 PF00672 HAMP domain CEW87_06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_06210 PF00512 His Kinase A (phospho-acceptor) domain CEW87_06210 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEW87_06210 PF01627 Hpt domain CEW87_06210 PF00072 Response regulator receiver domain CEW87_06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_06215 PF03466 LysR substrate binding domain CEW87_06230 PF00155 Aminotransferase class I and II CEW87_06230 PF00392 Bacterial regulatory proteins, gntR family CEW87_06235 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_06245 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_06250 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CEW87_06260 PF02080 TrkA-C domain CEW87_06260 PF03471 Transporter associated domain CEW87_06260 PF00999 Sodium/hydrogen exchanger family CEW87_06275 PF13478 XdhC Rossmann domain CEW87_06275 PF02625 XdhC and CoxI family CEW87_06290 PF00392 Bacterial regulatory proteins, gntR family CEW87_06290 PF00155 Aminotransferase class I and II CEW87_06300 PF03476 MOSC N-terminal beta barrel domain CEW87_06300 PF03473 MOSC domain CEW87_06300 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_06305 PF08448 PAS fold CEW87_06305 PF00990 Diguanylate cyclase, GGDEF domain CEW87_06325 PF01799 [2Fe-2S] binding domain CEW87_06325 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_06330 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CEW87_06330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEW87_06345 PF00005 ABC transporter CEW87_06365 PF03466 LysR substrate binding domain CEW87_06365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_06370 PF00682 HMGL-like CEW87_06370 PF08502 LeuA allosteric (dimerisation) domain CEW87_06375 PF00158 Sigma-54 interaction domain CEW87_06375 PF02954 Bacterial regulatory protein, Fis family CEW87_06375 PF01590 GAF domain CEW87_06390 PF18113 Rubredoxin binding C-terminal domain CEW87_06390 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_06400 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_06405 PF00005 ABC transporter CEW87_06410 PF02560 Cyanate lyase C-terminal domain CEW87_06415 PF00753 Metallo-beta-lactamase superfamily CEW87_06425 PF01037 Lrp/AsnC ligand binding domain CEW87_06430 PF00892 EamA-like transporter family CEW87_06435 PF13458 Periplasmic binding protein CEW87_06440 PF00672 HAMP domain CEW87_06440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEW87_06440 PF00512 His Kinase A (phospho-acceptor) domain CEW87_06440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_06440 PF00072 Response regulator receiver domain CEW87_06440 PF01627 Hpt domain CEW87_06445 PF00072 Response regulator receiver domain CEW87_06450 PF13932 GidA associated domain CEW87_06450 PF01134 Glucose inhibited division protein A CEW87_06455 PF02527 rRNA small subunit methyltransferase G CEW87_06460 PF13614 AAA domain CEW87_06465 PF02195 ParB-like nuclease domain CEW87_06465 PF17762 HTH domain found in ParB protein CEW87_06475 PF07690 Major Facilitator Superfamily CEW87_06490 PF00119 ATP synthase A chain CEW87_06495 PF00137 ATP synthase subunit C CEW87_06500 PF00430 ATP synthase B/B' CF(0) CEW87_06505 PF00213 ATP synthase delta (OSCP) subunit CEW87_06510 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEW87_06510 PF00306 ATP synthase alpha/beta chain, C terminal domain CEW87_06510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEW87_06515 PF00231 ATP synthase CEW87_06520 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEW87_06520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEW87_06525 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CEW87_06525 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CEW87_06540 PF01209 ubiE/COQ5 methyltransferase family CEW87_06550 PF00072 Response regulator receiver domain CEW87_06550 PF00486 Transcriptional regulatory protein, C terminal CEW87_06555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_06555 PF00512 His Kinase A (phospho-acceptor) domain CEW87_06555 PF11808 Phosphate regulon sensor protein PhoR CEW87_06555 PF00989 PAS fold CEW87_06570 PF13230 Glutamine amidotransferases class-II CEW87_06575 PF04143 Sulphur transport CEW87_06585 PF02934 GatB/GatE catalytic domain CEW87_06585 PF02637 GatB domain CEW87_06595 PF01425 Amidase CEW87_06600 PF02686 Glu-tRNAGln amidotransferase C subunit CEW87_06620 PF03717 Penicillin-binding Protein dimerisation domain CEW87_06620 PF00905 Penicillin binding protein transpeptidase domain CEW87_06625 PF01098 Cell cycle protein CEW87_06630 PF05036 Sporulation related domain CEW87_06630 PF03330 Lytic transglycolase CEW87_06635 PF00768 D-alanyl-D-alanine carboxypeptidase CEW87_06635 PF07943 Penicillin-binding protein 5, C-terminal domain CEW87_06640 PF01063 Amino-transferase class IV CEW87_06645 PF04359 Protein of unknown function (DUF493) CEW87_06650 PF03099 Biotin/lipoate A/B protein ligase family CEW87_06655 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CEW87_06655 PF04055 Radical SAM superfamily CEW87_06670 PF13361 UvrD-like helicase C-terminal domain CEW87_06670 PF00580 UvrD/REP helicase N-terminal domain CEW87_06680 PF00990 Diguanylate cyclase, GGDEF domain CEW87_06680 PF08448 PAS fold CEW87_06685 PF01464 Transglycosylase SLT domain CEW87_06695 PF01625 Peptide methionine sulfoxide reductase CEW87_06710 PF16925 Tetracyclin repressor-like, C-terminal domain CEW87_06710 PF00440 Bacterial regulatory proteins, tetR family CEW87_06715 PF08240 Alcohol dehydrogenase GroES-like domain CEW87_06715 PF00107 Zinc-binding dehydrogenase CEW87_06735 PF08495 FIST N domain CEW87_06735 PF10442 FIST C domain CEW87_06740 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEW87_06750 PF13360 PQQ-like domain CEW87_06750 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEW87_06760 PF00676 Dehydrogenase E1 component CEW87_06765 PF02780 Transketolase, C-terminal domain CEW87_06765 PF02779 Transketolase, pyrimidine binding domain CEW87_06775 PF02817 e3 binding domain CEW87_06775 PF00364 Biotin-requiring enzyme CEW87_06775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEW87_06780 PF03099 Biotin/lipoate A/B protein ligase family CEW87_06790 PF00732 GMC oxidoreductase CEW87_06790 PF05199 GMC oxidoreductase CEW87_06805 PF00158 Sigma-54 interaction domain CEW87_06805 PF01590 GAF domain CEW87_06805 PF02954 Bacterial regulatory protein, Fis family CEW87_06810 PF07690 Major Facilitator Superfamily CEW87_06820 PF09905 DNA-binding protein VF530 CEW87_06825 PF04960 Glutaminase CEW87_06855 PF08240 Alcohol dehydrogenase GroES-like domain CEW87_06855 PF00107 Zinc-binding dehydrogenase CEW87_06865 PF03747 ADP-ribosylglycohydrolase CEW87_06925 PF00171 Aldehyde dehydrogenase family CEW87_06935 PF00171 Aldehyde dehydrogenase family CEW87_06940 PF02913 FAD linked oxidases, C-terminal domain CEW87_06940 PF01565 FAD binding domain CEW87_06955 PF03358 NADPH-dependent FMN reductase CEW87_06965 PF03466 LysR substrate binding domain CEW87_06965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_06980 PF02028 BCCT, betaine/carnitine/choline family transporter CEW87_06985 PF01266 FAD dependent oxidoreductase CEW87_06995 PF00939 Sodium:sulfate symporter transmembrane region CEW87_07000 PF13085 2Fe-2S iron-sulfur cluster binding domain CEW87_07000 PF13183 4Fe-4S dicluster domain CEW87_07015 PF05681 Fumarate hydratase (Fumerase) CEW87_07020 PF05681 Fumarate hydratase (Fumerase) CEW87_07020 PF05683 Fumarase C-terminus CEW87_07025 PF00890 FAD binding domain CEW87_07025 PF02910 Fumarate reductase flavoprotein C-term CEW87_07035 PF00171 Aldehyde dehydrogenase family CEW87_07040 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_07055 PF00465 Iron-containing alcohol dehydrogenase CEW87_07060 PF03466 LysR substrate binding domain CEW87_07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_07090 PF02253 Phospholipase A1 CEW87_07095 PF00924 Mechanosensitive ion channel CEW87_07120 PF01734 Patatin-like phospholipase CEW87_07150 PF09704 CRISPR-associated protein (Cas_Cas5) CEW87_07170 PF01867 CRISPR associated protein Cas1 CEW87_07175 PF09827 CRISPR associated protein Cas2 CEW87_07195 PF14659 Phage integrase, N-terminal SAM-like domain CEW87_07195 PF00589 Phage integrase family CEW87_07215 PF06969 HemN C-terminal domain CEW87_07215 PF04055 Radical SAM superfamily CEW87_07220 PF01725 Ham1 family CEW87_07225 PF03725 3' exoribonuclease family, domain 2 CEW87_07225 PF01138 3' exoribonuclease family, domain 1 CEW87_07235 PF00069 Protein kinase domain CEW87_07235 PF03793 PASTA domain CEW87_07240 PF03755 YicC-like family, N-terminal region CEW87_07240 PF08340 Domain of unknown function (DUF1732) CEW87_07245 PF00892 EamA-like transporter family CEW87_07255 PF08406 CbbQ/NirQ/NorQ C-terminal CEW87_07255 PF07728 AAA domain (dynein-related subfamily) CEW87_07260 PF00795 Carbon-nitrogen hydrolase CEW87_07270 PF03069 Acetamidase/Formamidase family CEW87_07275 PF00005 ABC transporter CEW87_07280 PF09383 NIL domain CEW87_07280 PF00005 ABC transporter CEW87_07290 PF02653 Branched-chain amino acid transport system / permease component CEW87_07290 PF11862 Domain of unknown function (DUF3382) CEW87_07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_07300 PF00512 His Kinase A (phospho-acceptor) domain CEW87_07300 PF18415 Histidine kinase receptor ArcB trans-membrane domain CEW87_07300 PF01627 Hpt domain CEW87_07300 PF00989 PAS fold CEW87_07300 PF00072 Response regulator receiver domain CEW87_07305 PF00072 Response regulator receiver domain CEW87_07310 PF00625 Guanylate kinase CEW87_07315 PF01192 RNA polymerase Rpb6 CEW87_07320 PF02824 TGS domain CEW87_07320 PF04607 Region found in RelA / SpoT proteins CEW87_07320 PF13291 ACT domain CEW87_07330 PF01209 ubiE/COQ5 methyltransferase family CEW87_07340 PF00027 Cyclic nucleotide-binding domain CEW87_07340 PF00325 Bacterial regulatory proteins, crp family CEW87_07345 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CEW87_07345 PF07730 Histidine kinase CEW87_07345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_07345 PF00672 HAMP domain CEW87_07350 PF00196 Bacterial regulatory proteins, luxR family CEW87_07350 PF00072 Response regulator receiver domain CEW87_07365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEW87_07365 PF01568 Molydopterin dinucleotide binding domain CEW87_07365 PF00384 Molybdopterin oxidoreductase CEW87_07370 PF12838 4Fe-4S dicluster domain CEW87_07370 PF12800 4Fe-4S binding domain CEW87_07375 PF12837 4Fe-4S binding domain CEW87_07375 PF12801 4Fe-4S binding domain CEW87_07380 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CEW87_07385 PF03264 NapC/NirT cytochrome c family, N-terminal region CEW87_07390 PF00005 ABC transporter CEW87_07395 PF03379 CcmB protein CEW87_07400 PF01578 Cytochrome C assembly protein CEW87_07410 PF03100 CcmE CEW87_07415 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CEW87_07415 PF01578 Cytochrome C assembly protein CEW87_07420 PF08534 Redoxin CEW87_07425 PF03918 Cytochrome C biogenesis protein CEW87_07435 PF01168 Alanine racemase, N-terminal domain CEW87_07435 PF00842 Alanine racemase, C-terminal domain CEW87_07440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW87_07440 PF08447 PAS fold CEW87_07440 PF13426 PAS domain CEW87_07445 PF04820 Tryptophan halogenase CEW87_07470 PF00990 Diguanylate cyclase, GGDEF domain CEW87_07475 PF00999 Sodium/hydrogen exchanger family CEW87_07495 PF02801 Beta-ketoacyl synthase, C-terminal domain CEW87_07495 PF00109 Beta-ketoacyl synthase, N-terminal domain CEW87_07505 PF01522 Polysaccharide deacetylase CEW87_07510 PF01734 Patatin-like phospholipase CEW87_07550 PF02310 B12 binding domain CEW87_07550 PF04055 Radical SAM superfamily CEW87_07555 PF16197 Ketoacyl-synthetase C-terminal extension CEW87_07555 PF08240 Alcohol dehydrogenase GroES-like domain CEW87_07555 PF00109 Beta-ketoacyl synthase, N-terminal domain CEW87_07555 PF00698 Acyl transferase domain CEW87_07555 PF02801 Beta-ketoacyl synthase, C-terminal domain CEW87_07555 PF00550 Phosphopantetheine attachment site CEW87_07555 PF08659 KR domain CEW87_07555 PF14765 Polyketide synthase dehydratase CEW87_07560 PF00550 Phosphopantetheine attachment site CEW87_07570 PF00005 ABC transporter CEW87_07585 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CEW87_07585 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CEW87_07605 PF00144 Beta-lactamase CEW87_07625 PF00132 Bacterial transferase hexapeptide (six repeats) CEW87_07630 PF00171 Aldehyde dehydrogenase family CEW87_07635 PF00378 Enoyl-CoA hydratase/isomerase CEW87_07640 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW87_07640 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW87_07640 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CEW87_07645 PF03061 Thioesterase superfamily CEW87_07655 PF05138 Phenylacetic acid catabolic protein CEW87_07660 PF06243 Phenylacetic acid degradation B CEW87_07665 PF05138 Phenylacetic acid catabolic protein CEW87_07670 PF01883 Iron-sulfur cluster assembly protein CEW87_07675 PF00175 Oxidoreductase NAD-binding domain CEW87_07675 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_07675 PF00970 Oxidoreductase FAD-binding domain CEW87_07685 PF02803 Thiolase, C-terminal domain CEW87_07685 PF00108 Thiolase, N-terminal domain CEW87_07690 PF13458 Periplasmic binding protein CEW87_07700 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW87_07700 PF00005 ABC transporter CEW87_07705 PF00005 ABC transporter CEW87_07715 PF00216 Bacterial DNA-binding protein CEW87_07720 PF00270 DEAD/DEAH box helicase CEW87_07720 PF00271 Helicase conserved C-terminal domain CEW87_07725 PF01029 NusB family CEW87_07730 PF00885 6,7-dimethyl-8-ribityllumazine synthase CEW87_07735 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CEW87_07735 PF00925 GTP cyclohydrolase II CEW87_07740 PF00677 Lumazine binding domain CEW87_07745 PF11412 Disulphide bond corrector protein DsbC CEW87_07745 PF02683 Cytochrome C biogenesis protein transmembrane region CEW87_07765 PF07715 TonB-dependent Receptor Plug Domain CEW87_07765 PF00593 TonB dependent receptor CEW87_07775 PF00990 Diguanylate cyclase, GGDEF domain CEW87_07775 PF00563 EAL domain CEW87_07775 PF03707 Bacterial signalling protein N terminal repeat CEW87_07780 PF00990 Diguanylate cyclase, GGDEF domain CEW87_07780 PF17158 Membrane-associated sensor, integral membrane domain CEW87_07785 PF01554 MatE CEW87_07790 PF09506 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) CEW87_07795 PF00355 Rieske [2Fe-2S] domain CEW87_07800 PF04261 Dyp-type peroxidase family CEW87_07805 PF00141 Peroxidase CEW87_07815 PF14765 Polyketide synthase dehydratase CEW87_07815 PF02801 Beta-ketoacyl synthase, C-terminal domain CEW87_07815 PF16197 Ketoacyl-synthetase C-terminal extension CEW87_07815 PF08240 Alcohol dehydrogenase GroES-like domain CEW87_07815 PF00109 Beta-ketoacyl synthase, N-terminal domain CEW87_07815 PF08659 KR domain CEW87_07815 PF00107 Zinc-binding dehydrogenase CEW87_07815 PF00698 Acyl transferase domain CEW87_07815 PF00550 Phosphopantetheine attachment site CEW87_07820 PF03466 LysR substrate binding domain CEW87_07820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_07825 PF02515 CoA-transferase family III CEW87_07830 PF00682 HMGL-like CEW87_07835 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_07840 PF00580 UvrD/REP helicase N-terminal domain CEW87_07840 PF13361 UvrD-like helicase C-terminal domain CEW87_07860 PF00563 EAL domain CEW87_07860 PF00990 Diguanylate cyclase, GGDEF domain CEW87_07860 PF00360 Phytochrome region CEW87_07860 PF01590 GAF domain CEW87_07870 PF00990 Diguanylate cyclase, GGDEF domain CEW87_07870 PF00072 Response regulator receiver domain CEW87_07875 PF03707 Bacterial signalling protein N terminal repeat CEW87_07875 PF00990 Diguanylate cyclase, GGDEF domain CEW87_07875 PF00563 EAL domain CEW87_07895 PF00795 Carbon-nitrogen hydrolase CEW87_07900 PF07687 Peptidase dimerisation domain CEW87_07900 PF01546 Peptidase family M20/M25/M40 CEW87_07905 PF00291 Pyridoxal-phosphate dependent enzyme CEW87_07910 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_07915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_07930 PF03831 PhnA domain CEW87_07930 PF08274 PhnA Zinc-Ribbon CEW87_07935 PF16657 Maltogenic Amylase, C-terminal domain CEW87_07935 PF00128 Alpha amylase, catalytic domain CEW87_07945 PF06472 ABC transporter transmembrane region 2 CEW87_07945 PF00005 ABC transporter CEW87_07955 PF00128 Alpha amylase, catalytic domain CEW87_07965 PF00990 Diguanylate cyclase, GGDEF domain CEW87_07975 PF00580 UvrD/REP helicase N-terminal domain CEW87_07975 PF13361 UvrD-like helicase C-terminal domain CEW87_07985 PF00561 alpha/beta hydrolase fold CEW87_08000 PF05762 VWA domain containing CoxE-like protein CEW87_08005 PF07728 AAA domain (dynein-related subfamily) CEW87_08005 PF17868 AAA lid domain CEW87_08005 PF12592 Protein of unknown function (DUF3763) CEW87_08010 PF01814 Hemerythrin HHE cation binding domain CEW87_08015 PF02272 DHHA1 domain CEW87_08015 PF01411 tRNA synthetases class II (A) CEW87_08015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEW87_08020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEW87_08025 PF02558 Ketopantoate reductase PanE/ApbA CEW87_08025 PF08546 Ketopantoate reductase PanE/ApbA C terminal CEW87_08030 PF00596 Class II Aldolase and Adducin N-terminal domain CEW87_08040 PF00171 Aldehyde dehydrogenase family CEW87_08045 PF03328 HpcH/HpaI aldolase/citrate lyase family CEW87_08050 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEW87_08060 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CEW87_08065 PF00171 Aldehyde dehydrogenase family CEW87_08070 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEW87_08080 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_08090 PF01047 MarR family CEW87_08105 PF00378 Enoyl-CoA hydratase/isomerase CEW87_08110 PF13607 Succinyl-CoA ligase like flavodoxin domain CEW87_08110 PF13380 CoA binding domain CEW87_08110 PF00583 Acetyltransferase (GNAT) family CEW87_08115 PF00378 Enoyl-CoA hydratase/isomerase CEW87_08120 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_08125 PF01061 ABC-2 type transporter CEW87_08130 PF07759 Protein of unknown function (DUF1615) CEW87_08140 PF13417 Glutathione S-transferase, N-terminal domain CEW87_08140 PF00043 Glutathione S-transferase, C-terminal domain CEW87_08145 PF00561 alpha/beta hydrolase fold CEW87_08165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_08165 PF03466 LysR substrate binding domain CEW87_08185 PF00072 Response regulator receiver domain CEW87_08185 PF00486 Transcriptional regulatory protein, C terminal CEW87_08190 PF08521 Two-component sensor kinase N-terminal CEW87_08190 PF00512 His Kinase A (phospho-acceptor) domain CEW87_08190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_08195 PF01970 Tripartite tricarboxylate transporter TctA family CEW87_08210 PF00543 Nitrogen regulatory protein P-II CEW87_08215 PF00909 Ammonium Transporter Family CEW87_08225 PF00551 Formyl transferase CEW87_08230 PF01266 FAD dependent oxidoreductase CEW87_08240 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEW87_08240 PF01571 Aminomethyltransferase folate-binding domain CEW87_08240 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_08240 PF17806 Sarcosine oxidase A3 domain CEW87_08250 PF00120 Glutamine synthetase, catalytic domain CEW87_08265 PF01645 Conserved region in glutamate synthase CEW87_08270 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CEW87_08270 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CEW87_08275 PF02152 Dihydroneopterin aldolase CEW87_08290 PF00970 Oxidoreductase FAD-binding domain CEW87_08290 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_08290 PF00175 Oxidoreductase NAD-binding domain CEW87_08300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW87_08300 PF02770 Acyl-CoA dehydrogenase, middle domain CEW87_08300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW87_08305 PF01613 Flavin reductase like domain CEW87_08310 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEW87_08310 PF01571 Aminomethyltransferase folate-binding domain CEW87_08320 PF00672 HAMP domain CEW87_08320 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CEW87_08320 PF07730 Histidine kinase CEW87_08320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_08325 PF00196 Bacterial regulatory proteins, luxR family CEW87_08325 PF00072 Response regulator receiver domain CEW87_08330 PF01571 Aminomethyltransferase folate-binding domain CEW87_08330 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEW87_08335 PF00551 Formyl transferase CEW87_08340 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CEW87_08340 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CEW87_08355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_08365 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_08370 PF01037 Lrp/AsnC ligand binding domain CEW87_08370 PF13404 AsnC-type helix-turn-helix domain CEW87_08380 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_08390 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_08415 PF00202 Aminotransferase class-III CEW87_08420 PF03109 ABC1 family CEW87_08425 PF03485 Arginyl tRNA synthetase N terminal domain CEW87_08425 PF05746 DALR anticodon binding domain CEW87_08425 PF00750 tRNA synthetases class I (R) CEW87_08435 PF01323 DSBA-like thioredoxin domain CEW87_08435 PF00085 Thioredoxin CEW87_08440 PF00106 short chain dehydrogenase CEW87_08460 PF01497 Periplasmic binding protein CEW87_08470 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CEW87_08470 PF00561 alpha/beta hydrolase fold CEW87_08480 PF13411 MerR HTH family regulatory protein CEW87_08490 PF00484 Carbonic anhydrase CEW87_08495 PF02803 Thiolase, C-terminal domain CEW87_08495 PF00108 Thiolase, N-terminal domain CEW87_08500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW87_08500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW87_08500 PF02770 Acyl-CoA dehydrogenase, middle domain CEW87_08510 PF01613 Flavin reductase like domain CEW87_08515 PF00990 Diguanylate cyclase, GGDEF domain CEW87_08515 PF03707 Bacterial signalling protein N terminal repeat CEW87_08515 PF00563 EAL domain CEW87_08535 PF00440 Bacterial regulatory proteins, tetR family CEW87_08550 PF02798 Glutathione S-transferase, N-terminal domain CEW87_08565 PF12833 Helix-turn-helix domain CEW87_08565 PF02311 AraC-like ligand binding domain CEW87_08570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW87_08570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW87_08570 PF02770 Acyl-CoA dehydrogenase, middle domain CEW87_08585 PF01039 Carboxyl transferase domain CEW87_08590 PF00378 Enoyl-CoA hydratase/isomerase CEW87_08595 PF00364 Biotin-requiring enzyme CEW87_08595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEW87_08595 PF00289 Biotin carboxylase, N-terminal domain CEW87_08595 PF02785 Biotin carboxylase C-terminal domain CEW87_08600 PF00501 AMP-binding enzyme CEW87_08600 PF13193 AMP-binding enzyme C-terminal domain CEW87_08605 PF00682 HMGL-like CEW87_08625 PF03668 P-loop ATPase protein family CEW87_08645 PF01738 Dienelactone hydrolase family CEW87_08650 PF03641 Possible lysine decarboxylase CEW87_08660 PF02384 N-6 DNA Methylase CEW87_08660 PF07669 Eco57I restriction-modification methylase CEW87_08675 PF00005 ABC transporter CEW87_08680 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW87_08680 PF00005 ABC transporter CEW87_08685 PF11862 Domain of unknown function (DUF3382) CEW87_08685 PF02653 Branched-chain amino acid transport system / permease component CEW87_08690 PF02653 Branched-chain amino acid transport system / permease component CEW87_08695 PF13458 Periplasmic binding protein CEW87_08700 PF00171 Aldehyde dehydrogenase family CEW87_08700 PF01619 Proline dehydrogenase CEW87_08700 PF14850 DNA-binding domain of Proline dehydrogenase CEW87_08700 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CEW87_08705 PF01037 Lrp/AsnC ligand binding domain CEW87_08710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CEW87_08710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CEW87_08715 PF02424 ApbE family CEW87_08725 PF00892 EamA-like transporter family CEW87_08735 PF11871 Domain of unknown function (DUF3391) CEW87_08735 PF01966 HD domain CEW87_08745 PF01842 ACT domain CEW87_08745 PF00551 Formyl transferase CEW87_08750 PF00909 Ammonium Transporter Family CEW87_08755 PF00543 Nitrogen regulatory protein P-II CEW87_08770 PF01078 Magnesium chelatase, subunit ChlI CEW87_08770 PF13335 Magnesium chelatase, subunit ChlI C-terminal CEW87_08795 PF01726 LexA DNA binding domain CEW87_08795 PF00717 Peptidase S24-like CEW87_08840 PF06508 Queuosine biosynthesis protein QueC CEW87_08885 PF13335 Magnesium chelatase, subunit ChlI C-terminal CEW87_08885 PF01078 Magnesium chelatase, subunit ChlI CEW87_08895 PF07690 Major Facilitator Superfamily CEW87_08910 PF00005 ABC transporter CEW87_08915 PF00005 ABC transporter CEW87_08915 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW87_08920 PF02653 Branched-chain amino acid transport system / permease component CEW87_08920 PF11862 Domain of unknown function (DUF3382) CEW87_08925 PF02653 Branched-chain amino acid transport system / permease component CEW87_08930 PF13458 Periplasmic binding protein CEW87_08935 PF13458 Periplasmic binding protein CEW87_08950 PF04717 Type VI secretion system, phage-baseplate injector CEW87_08990 PF02607 B12 binding domain CEW87_08990 PF02574 Homocysteine S-methyltransferase CEW87_08990 PF00809 Pterin binding enzyme CEW87_08990 PF02965 Vitamin B12 dependent methionine synthase, activation domain CEW87_08990 PF02310 B12 binding domain CEW87_09000 PF13495 Phage integrase, N-terminal SAM-like domain CEW87_09000 PF00589 Phage integrase family CEW87_09025 PF08240 Alcohol dehydrogenase GroES-like domain CEW87_09025 PF00107 Zinc-binding dehydrogenase CEW87_09045 PF04542 Sigma-70 region 2 CEW87_09045 PF08281 Sigma-70, region 4 CEW87_09060 PF02272 DHHA1 domain CEW87_09060 PF01411 tRNA synthetases class II (A) CEW87_09060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEW87_09065 PF01590 GAF domain CEW87_09065 PF00158 Sigma-54 interaction domain CEW87_09065 PF02954 Bacterial regulatory protein, Fis family CEW87_09070 PF00171 Aldehyde dehydrogenase family CEW87_09080 PF13360 PQQ-like domain CEW87_09080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEW87_09115 PF03992 Antibiotic biosynthesis monooxygenase CEW87_09135 PF04463 Protein of unknown function (DUF523) CEW87_09140 PF00893 Small Multidrug Resistance protein CEW87_09150 PF03466 LysR substrate binding domain CEW87_09150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_09155 PF00085 Thioredoxin CEW87_09165 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CEW87_09165 PF14572 Phosphoribosyl synthetase-associated domain CEW87_09170 PF07075 Protein of unknown function (DUF1343) CEW87_09185 PF00924 Mechanosensitive ion channel CEW87_09185 PF05552 Conserved TM helix CEW87_09190 PF05116 Sucrose-6F-phosphate phosphohydrolase CEW87_09190 PF00982 Glycosyltransferase family 20 CEW87_09205 PF00579 tRNA synthetases class I (W and Y) CEW87_09215 PF01565 FAD binding domain CEW87_09215 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CEW87_09220 PF01522 Polysaccharide deacetylase CEW87_09230 PF00534 Glycosyl transferases group 1 CEW87_09230 PF13439 Glycosyltransferase Family 4 CEW87_09260 PF00005 ABC transporter CEW87_09260 PF00664 ABC transporter transmembrane region CEW87_09270 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase CEW87_09275 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEW87_09280 PF13439 Glycosyltransferase Family 4 CEW87_09280 PF00534 Glycosyl transferases group 1 CEW87_09285 PF13439 Glycosyltransferase Family 4 CEW87_09285 PF00534 Glycosyl transferases group 1 CEW87_09290 PF00149 Calcineurin-like phosphoesterase CEW87_09305 PF00920 Dehydratase family CEW87_09330 PF16868 NMT1-like family CEW87_09335 PF02386 Cation transport protein CEW87_09340 PF00486 Transcriptional regulatory protein, C terminal CEW87_09340 PF00072 Response regulator receiver domain CEW87_09345 PF02702 Osmosensitive K+ channel His kinase sensor domain CEW87_09345 PF13492 GAF domain CEW87_09345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_09345 PF00512 His Kinase A (phospho-acceptor) domain CEW87_09345 PF13493 Domain of unknown function (DUF4118) CEW87_09355 PF01810 LysE type translocator CEW87_09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_09360 PF03459 TOBE domain CEW87_09365 PF12849 PBP superfamily domain CEW87_09370 PF00753 Metallo-beta-lactamase superfamily CEW87_09375 PF01741 Large-conductance mechanosensitive channel, MscL CEW87_09380 PF03458 UPF0126 domain CEW87_09390 PF02653 Branched-chain amino acid transport system / permease component CEW87_09395 PF11862 Domain of unknown function (DUF3382) CEW87_09395 PF02653 Branched-chain amino acid transport system / permease component CEW87_09405 PF02441 Flavoprotein CEW87_09415 PF00085 Thioredoxin CEW87_09420 PF14815 NUDIX domain CEW87_09420 PF00730 HhH-GPD superfamily base excision DNA repair protein CEW87_09420 PF00633 Helix-hairpin-helix motif CEW87_09420 PF10576 Iron-sulfur binding domain of endonuclease III CEW87_09425 PF01613 Flavin reductase like domain CEW87_09430 PF00990 Diguanylate cyclase, GGDEF domain CEW87_09435 PF17788 HypF Kae1-like domain CEW87_09435 PF01300 Telomere recombination CEW87_09435 PF07503 HypF finger CEW87_09435 PF00708 Acylphosphatase CEW87_09440 PF00267 Gram-negative porin CEW87_09445 PF00005 ABC transporter CEW87_09445 PF00664 ABC transporter transmembrane region CEW87_09450 PF13439 Glycosyltransferase Family 4 CEW87_09450 PF00534 Glycosyl transferases group 1 CEW87_09470 PF00535 Glycosyl transferase family 2 CEW87_09475 PF04932 O-Antigen ligase CEW87_09485 PF00884 Sulfatase CEW87_09505 PF13439 Glycosyltransferase Family 4 CEW87_09505 PF00534 Glycosyl transferases group 1 CEW87_09510 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEW87_09515 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEW87_09520 PF01370 NAD dependent epimerase/dehydratase family CEW87_09525 PF01467 Cytidylyltransferase-like CEW87_09525 PF00294 pfkB family carbohydrate kinase CEW87_09530 PF00300 Histidine phosphatase superfamily (branch 1) CEW87_09535 PF02654 Cobalamin-5-phosphate synthase CEW87_09540 PF02277 Phosphoribosyltransferase CEW87_09545 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CEW87_09550 PF07715 TonB-dependent Receptor Plug Domain CEW87_09550 PF00593 TonB dependent receptor CEW87_09555 PF01032 FecCD transport family CEW87_09560 PF00005 ABC transporter CEW87_09565 PF12557 Cob(I)alamin adenosyltransferase N terminal CEW87_09565 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CEW87_09570 PF10414 Sirohaem synthase dimerisation region CEW87_09570 PF14824 Sirohaem biosynthesis protein central CEW87_09570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW87_09575 PF07685 CobB/CobQ-like glutamine amidotransferase domain CEW87_09575 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEW87_09580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEW87_09600 PF02896 PEP-utilising enzyme, TIM barrel domain CEW87_09600 PF05524 PEP-utilising enzyme, N-terminal CEW87_09600 PF00391 PEP-utilising enzyme, mobile domain CEW87_09605 PF00381 PTS HPr component phosphorylation site CEW87_09610 PF03610 PTS system fructose IIA component CEW87_09615 PF03466 LysR substrate binding domain CEW87_09615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_09625 PF00691 OmpA family CEW87_09625 PF05736 OprF membrane domain CEW87_09630 PF01384 Phosphate transporter family CEW87_09645 PF03707 Bacterial signalling protein N terminal repeat CEW87_09645 PF00990 Diguanylate cyclase, GGDEF domain CEW87_09645 PF00563 EAL domain CEW87_09650 PF12848 ABC transporter CEW87_09650 PF00005 ABC transporter CEW87_09670 PF00909 Ammonium Transporter Family CEW87_09675 PF13847 Methyltransferase domain CEW87_09695 PF01476 LysM domain CEW87_09695 PF04972 BON domain CEW87_09705 PF00563 EAL domain CEW87_09705 PF00990 Diguanylate cyclase, GGDEF domain CEW87_09705 PF03707 Bacterial signalling protein N terminal repeat CEW87_09710 PF00563 EAL domain CEW87_09710 PF00990 Diguanylate cyclase, GGDEF domain CEW87_09710 PF13426 PAS domain CEW87_09715 PF13416 Bacterial extracellular solute-binding protein CEW87_09720 PF00563 EAL domain CEW87_09720 PF03707 Bacterial signalling protein N terminal repeat CEW87_09720 PF00990 Diguanylate cyclase, GGDEF domain CEW87_09725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEW87_09725 PF00672 HAMP domain CEW87_09725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_09725 PF00512 His Kinase A (phospho-acceptor) domain CEW87_09725 PF00072 Response regulator receiver domain CEW87_09725 PF01627 Hpt domain CEW87_09730 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CEW87_09735 PF01176 Translation initiation factor 1A / IF-1 CEW87_09750 PF14480 DNA polymerase III polC-type N-terminus I CEW87_09750 PF11490 DNA polymerase III polC-type N-terminus II CEW87_09750 PF00929 Exonuclease CEW87_09750 PF07733 Bacterial DNA polymerase III alpha NTPase domain CEW87_09750 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CEW87_09750 PF02811 PHP domain CEW87_09750 PF14579 Helix-hairpin-helix motif CEW87_09755 PF00378 Enoyl-CoA hydratase/isomerase CEW87_09765 PF06508 Queuosine biosynthesis protein QueC CEW87_09770 PF04055 Radical SAM superfamily CEW87_09780 PF00691 OmpA family CEW87_09785 PF04052 TolB amino-terminal domain CEW87_09785 PF07676 WD40-like Beta Propeller Repeat CEW87_09795 PF02472 Biopolymer transport protein ExbD/TolR CEW87_09800 PF01618 MotA/TolQ/ExbB proton channel family CEW87_09805 PF03061 Thioesterase superfamily CEW87_09815 PF00227 Proteasome subunit CEW87_09820 PF07724 AAA domain (Cdc48 subfamily) CEW87_09820 PF00004 ATPase family associated with various cellular activities (AAA) CEW87_09820 PF10431 C-terminal, D2-small domain, of ClpB protein CEW87_09830 PF00990 Diguanylate cyclase, GGDEF domain CEW87_09830 PF13188 PAS domain CEW87_09830 PF03707 Bacterial signalling protein N terminal repeat CEW87_09830 PF00563 EAL domain CEW87_09835 PF01479 S4 domain CEW87_09855 PF02421 Ferrous iron transport protein B CEW87_09855 PF07670 Nucleoside recognition CEW87_09855 PF17910 FeoB cytosolic helical domain CEW87_09855 PF07664 Ferrous iron transport protein B C terminus CEW87_09860 PF13640 2OG-Fe(II) oxygenase superfamily CEW87_09860 PF18331 PKHD-type hydroxylase C-terminal domain CEW87_09865 PF01070 FMN-dependent dehydrogenase CEW87_09870 PF00593 TonB dependent receptor CEW87_09870 PF07715 TonB-dependent Receptor Plug Domain CEW87_09875 PF02321 Outer membrane efflux protein CEW87_09880 PF02687 FtsX-like permease family CEW87_09880 PF12704 MacB-like periplasmic core domain CEW87_09880 PF00005 ABC transporter CEW87_09885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEW87_09890 PF02472 Biopolymer transport protein ExbD/TolR CEW87_09895 PF01618 MotA/TolQ/ExbB proton channel family CEW87_09905 PF00210 Ferritin-like domain CEW87_09910 PF04324 BFD-like [2Fe-2S] binding domain CEW87_09915 PF10636 Hemin uptake protein hemP CEW87_09930 PF00563 EAL domain CEW87_09930 PF00990 Diguanylate cyclase, GGDEF domain CEW87_09930 PF08447 PAS fold CEW87_09930 PF08448 PAS fold CEW87_09940 PF01790 Prolipoprotein diacylglyceryl transferase CEW87_09945 PF04337 Protein of unknown function, DUF480 CEW87_09950 PF00672 HAMP domain CEW87_09950 PF00211 Adenylate and Guanylate cyclase catalytic domain CEW87_09950 PF02743 Cache domain CEW87_09965 PF13439 Glycosyltransferase Family 4 CEW87_09965 PF00534 Glycosyl transferases group 1 CEW87_09970 PF00294 pfkB family carbohydrate kinase CEW87_09980 PF01219 Prokaryotic diacylglycerol kinase CEW87_09995 PF02785 Biotin carboxylase C-terminal domain CEW87_09995 PF00289 Biotin carboxylase, N-terminal domain CEW87_09995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEW87_10000 PF00364 Biotin-requiring enzyme CEW87_10005 PF01220 Dehydroquinase class II CEW87_10010 PF00578 AhpC/TSA family CEW87_10020 PF01225 Mur ligase family, catalytic domain CEW87_10020 PF02875 Mur ligase family, glutamate ligase domain CEW87_10020 PF08245 Mur ligase middle domain CEW87_10030 PF13580 SIS domain CEW87_10035 PF02021 Uncharacterised protein family UPF0102 CEW87_10040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW87_10045 PF01979 Amidohydrolase family CEW87_10060 PF02381 MraZ protein, putative antitoxin-like CEW87_10065 PF01795 MraW methylase family CEW87_10075 PF00905 Penicillin binding protein transpeptidase domain CEW87_10075 PF03717 Penicillin-binding Protein dimerisation domain CEW87_10080 PF08245 Mur ligase middle domain CEW87_10080 PF02875 Mur ligase family, glutamate ligase domain CEW87_10080 PF01225 Mur ligase family, catalytic domain CEW87_10085 PF08245 Mur ligase middle domain CEW87_10085 PF02875 Mur ligase family, glutamate ligase domain CEW87_10085 PF01225 Mur ligase family, catalytic domain CEW87_10090 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CEW87_10090 PF00953 Glycosyl transferase family 4 CEW87_10095 PF08245 Mur ligase middle domain CEW87_10100 PF01098 Cell cycle protein CEW87_10105 PF04101 Glycosyltransferase family 28 C-terminal domain CEW87_10105 PF03033 Glycosyltransferase family 28 N-terminal domain CEW87_10110 PF02875 Mur ligase family, glutamate ligase domain CEW87_10110 PF01225 Mur ligase family, catalytic domain CEW87_10110 PF08245 Mur ligase middle domain CEW87_10115 PF07478 D-ala D-ala ligase C-terminus CEW87_10115 PF01820 D-ala D-ala ligase N-terminus CEW87_10120 PF08478 POTRA domain, FtsQ-type CEW87_10120 PF03799 Cell division protein FtsQ CEW87_10125 PF02491 SHS2 domain inserted in FTSA CEW87_10130 PF00091 Tubulin/FtsZ family, GTPase domain CEW87_10130 PF12327 FtsZ family, C-terminal domain CEW87_10135 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CEW87_10150 PF02810 SEC-C motif CEW87_10150 PF07517 SecA DEAD-like domain CEW87_10150 PF01043 SecA preprotein cross-linking domain CEW87_10150 PF07516 SecA Wing and Scaffold domain CEW87_10155 PF01960 ArgJ family CEW87_10160 PF02705 K+ potassium transporter CEW87_10165 PF03109 ABC1 family CEW87_10175 PF04379 ApaG domain CEW87_10180 PF08328 Adenylosuccinate lyase C-terminal CEW87_10180 PF00206 Lyase CEW87_10190 PF02355 Protein export membrane protein CEW87_10190 PF07549 SecD/SecF GG Motif CEW87_10195 PF07549 SecD/SecF GG Motif CEW87_10195 PF13721 SecD export protein N-terminal TM region CEW87_10195 PF02355 Protein export membrane protein CEW87_10200 PF02699 Preprotein translocase subunit CEW87_10205 PF01702 Queuine tRNA-ribosyltransferase CEW87_10210 PF02547 Queuosine biosynthesis protein CEW87_10220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_10220 PF03466 LysR substrate binding domain CEW87_10230 PF01027 Inhibitor of apoptosis-promoting Bax1 CEW87_10235 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CEW87_10240 PF01171 PP-loop family CEW87_10240 PF09179 TilS substrate binding domain CEW87_10240 PF11734 TilS substrate C-terminal domain CEW87_10245 PF00196 Bacterial regulatory proteins, luxR family CEW87_10245 PF00072 Response regulator receiver domain CEW87_10250 PF00512 His Kinase A (phospho-acceptor) domain CEW87_10250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_10250 PF00989 PAS fold CEW87_10255 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_10260 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CEW87_10265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_10270 PF00849 RNA pseudouridylate synthase CEW87_10270 PF01479 S4 domain CEW87_10275 PF00571 CBS domain CEW87_10275 PF01595 Cyclin M transmembrane N-terminal domain CEW87_10275 PF03471 Transporter associated domain CEW87_10280 PF03741 Integral membrane protein TerC family CEW87_10295 PF12704 MacB-like periplasmic core domain CEW87_10295 PF02687 FtsX-like permease family CEW87_10295 PF00005 ABC transporter CEW87_10300 PF12704 MacB-like periplasmic core domain CEW87_10300 PF02687 FtsX-like permease family CEW87_10300 PF00005 ABC transporter CEW87_10305 PF02687 FtsX-like permease family CEW87_10305 PF12704 MacB-like periplasmic core domain CEW87_10305 PF00005 ABC transporter CEW87_10310 PF13533 Biotin-lipoyl like CEW87_10315 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEW87_10315 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CEW87_10320 PF00924 Mechanosensitive ion channel CEW87_10325 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CEW87_10330 PF13505 Outer membrane protein beta-barrel domain CEW87_10330 PF00691 OmpA family CEW87_10335 PF00271 Helicase conserved C-terminal domain CEW87_10335 PF00176 SNF2 family N-terminal domain CEW87_10335 PF04434 SWIM zinc finger CEW87_10340 PF01144 Coenzyme A transferase CEW87_10345 PF08882 Acetone carboxylase gamma subunit CEW87_10350 PF02538 Hydantoinase B/oxoprolinase CEW87_10355 PF05378 Hydantoinase/oxoprolinase N-terminal region CEW87_10355 PF01968 Hydantoinase/oxoprolinase CEW87_10360 PF00158 Sigma-54 interaction domain CEW87_10360 PF02954 Bacterial regulatory protein, Fis family CEW87_10360 PF01590 GAF domain CEW87_10365 PF01964 Radical SAM ThiC family CEW87_10365 PF13667 ThiC-associated domain CEW87_10370 PF08543 Phosphomethylpyrimidine kinase CEW87_10380 PF12704 MacB-like periplasmic core domain CEW87_10380 PF02687 FtsX-like permease family CEW87_10380 PF00005 ABC transporter CEW87_10405 PF13614 AAA domain CEW87_10415 PF13401 AAA domain CEW87_10415 PF01471 Putative peptidoglycan binding domain CEW87_10420 PF02350 UDP-N-acetylglucosamine 2-epimerase CEW87_10440 PF00534 Glycosyl transferases group 1 CEW87_10445 PF13537 Glutamine amidotransferase domain CEW87_10445 PF00733 Asparagine synthase CEW87_10450 PF13439 Glycosyltransferase Family 4 CEW87_10455 PF13537 Glutamine amidotransferase domain CEW87_10455 PF00733 Asparagine synthase CEW87_10465 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEW87_10465 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEW87_10465 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEW87_10470 PF13439 Glycosyltransferase Family 4 CEW87_10470 PF00534 Glycosyl transferases group 1 CEW87_10525 PF14667 Polysaccharide biosynthesis C-terminal domain CEW87_10525 PF01943 Polysaccharide biosynthesis protein CEW87_10540 PF00535 Glycosyl transferase family 2 CEW87_10575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CEW87_10575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CEW87_10580 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CEW87_10590 PF13537 Glutamine amidotransferase domain CEW87_10590 PF00733 Asparagine synthase CEW87_10595 PF01850 PIN domain CEW87_10615 PF00501 AMP-binding enzyme CEW87_10615 PF13193 AMP-binding enzyme C-terminal domain CEW87_10635 PF00696 Amino acid kinase family CEW87_10640 PF00011 Hsp20/alpha crystallin family CEW87_10650 PF00545 ribonuclease CEW87_10660 PF16124 RecQ zinc-binding CEW87_10660 PF00570 HRDC domain CEW87_10660 PF00271 Helicase conserved C-terminal domain CEW87_10660 PF00270 DEAD/DEAH box helicase CEW87_10660 PF09382 RQC domain CEW87_10665 PF01467 Cytidylyltransferase-like CEW87_10670 PF01510 N-acetylmuramoyl-L-alanine amidase CEW87_10675 PF01464 Transglycosylase SLT domain CEW87_10675 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CEW87_10680 PF00155 Aminotransferase class I and II CEW87_10685 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CEW87_10685 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CEW87_10690 PF00390 Malic enzyme, N-terminal domain CEW87_10690 PF03949 Malic enzyme, NAD binding domain CEW87_10690 PF01515 Phosphate acetyl/butaryl transferase CEW87_10700 PF00768 D-alanyl-D-alanine carboxypeptidase CEW87_10710 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CEW87_10710 PF00361 Proton-conducting membrane transporter CEW87_10710 PF13244 Domain of unknown function (DUF4040) CEW87_10710 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CEW87_10715 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CEW87_10720 PF00361 Proton-conducting membrane transporter CEW87_10725 PF01899 Na+/H+ ion antiporter subunit CEW87_10730 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CEW87_10735 PF03334 Na+/H+ antiporter subunit CEW87_10740 PF03334 Na+/H+ antiporter subunit CEW87_10745 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CEW87_10760 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CEW87_10765 PF00361 Proton-conducting membrane transporter CEW87_10765 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CEW87_10765 PF13244 Domain of unknown function (DUF4040) CEW87_10765 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CEW87_10770 PF00334 Nucleoside diphosphate kinase CEW87_10775 PF04055 Radical SAM superfamily CEW87_10785 PF13464 Domain of unknown function (DUF4115) CEW87_10790 PF04551 GcpE protein CEW87_10795 PF03129 Anticodon binding domain CEW87_10795 PF13393 Histidyl-tRNA synthetase CEW87_10805 PF13360 PQQ-like domain CEW87_10810 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CEW87_10810 PF01926 50S ribosome-binding GTPase CEW87_10815 PF17209 Hfq protein CEW87_10820 PF16360 GTP-binding GTPase Middle Region CEW87_10820 PF13167 GTP-binding GTPase N-terminal CEW87_10820 PF01926 50S ribosome-binding GTPase CEW87_10825 PF12221 Bacterial membrane protein N terminal CEW87_10825 PF01145 SPFH domain / Band 7 family CEW87_10830 PF01145 SPFH domain / Band 7 family CEW87_10840 PF13393 Histidyl-tRNA synthetase CEW87_10845 PF00709 Adenylosuccinate synthetase CEW87_10860 PF08461 Ribonuclease R winged-helix domain CEW87_10860 PF08206 Ribonuclease B OB domain CEW87_10860 PF00773 RNB domain CEW87_10860 PF00575 S1 RNA binding domain CEW87_10860 PF17876 Cold shock domain CEW87_10865 PF00588 SpoU rRNA Methylase family CEW87_10865 PF08032 RNA 2'-O ribose methyltransferase substrate binding CEW87_10870 PF03861 ANTAR domain CEW87_10870 PF08376 Nitrate and nitrite sensing CEW87_10875 PF00005 ABC transporter CEW87_10880 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_10890 PF00005 ABC transporter CEW87_10895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW87_10900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEW87_10900 PF04324 BFD-like [2Fe-2S] binding domain CEW87_10900 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_10900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEW87_10900 PF18267 Rubredoxin NAD+ reductase C-terminal domain CEW87_10915 PF00571 CBS domain CEW87_10920 PF02028 BCCT, betaine/carnitine/choline family transporter CEW87_10930 PF00881 Nitroreductase family CEW87_10940 PF02535 ZIP Zinc transporter CEW87_10945 PF12169 DNA polymerase III subunits gamma and tau domain III CEW87_10945 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CEW87_10945 PF12170 DNA polymerase III tau subunit V interacting with alpha CEW87_10950 PF02575 YbaB/EbfC DNA-binding family CEW87_10955 PF02132 RecR protein CEW87_10955 PF13662 Toprim domain CEW87_10960 PF00355 Rieske [2Fe-2S] domain CEW87_10960 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CEW87_10965 PF00032 Cytochrome b(C-terminal)/b6/petD CEW87_10965 PF00033 Cytochrome b/b6/petB CEW87_10970 PF02167 Cytochrome C1 family CEW87_10975 PF02798 Glutathione S-transferase, N-terminal domain CEW87_10975 PF00043 Glutathione S-transferase, C-terminal domain CEW87_10980 PF04386 Stringent starvation protein B CEW87_10985 PF13439 Glycosyltransferase Family 4 CEW87_10985 PF00534 Glycosyl transferases group 1 CEW87_10995 PF01266 FAD dependent oxidoreductase CEW87_11000 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CEW87_11010 PF00166 Chaperonin 10 Kd subunit CEW87_11015 PF00118 TCP-1/cpn60 chaperonin family CEW87_11020 PF00486 Transcriptional regulatory protein, C terminal CEW87_11020 PF00072 Response regulator receiver domain CEW87_11025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_11025 PF08521 Two-component sensor kinase N-terminal CEW87_11025 PF00512 His Kinase A (phospho-acceptor) domain CEW87_11030 PF04341 Protein of unknown function, DUF485 CEW87_11035 PF00474 Sodium:solute symporter family CEW87_11040 PF00512 His Kinase A (phospho-acceptor) domain CEW87_11040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_11040 PF08521 Two-component sensor kinase N-terminal CEW87_11045 PF00486 Transcriptional regulatory protein, C terminal CEW87_11045 PF00072 Response regulator receiver domain CEW87_11055 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CEW87_11060 PF00875 DNA photolyase CEW87_11060 PF03441 FAD binding domain of DNA photolyase CEW87_11075 PF05088 Bacterial NAD-glutamate dehydrogenase CEW87_11080 PF01488 Shikimate / quinate 5-dehydrogenase CEW87_11080 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CEW87_11080 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CEW87_11085 PF03462 PCRF domain CEW87_11085 PF00472 RF-1 domain CEW87_11090 PF05175 Methyltransferase small domain CEW87_11090 PF17827 PrmC N-terminal domain CEW87_11095 PF00462 Glutaredoxin CEW87_11120 PF00069 Protein kinase domain CEW87_11120 PF03793 PASTA domain CEW87_11125 PF14698 Argininosuccinate lyase C-terminal CEW87_11125 PF00206 Lyase CEW87_11130 PF04397 LytTr DNA-binding domain CEW87_11130 PF00072 Response regulator receiver domain CEW87_11140 PF00114 Pilin (bacterial filament) CEW87_11140 PF07963 Prokaryotic N-terminal methylation motif CEW87_11160 PF05567 Neisseria PilC beta-propeller domain CEW87_11165 PF00114 Pilin (bacterial filament) CEW87_11165 PF07963 Prokaryotic N-terminal methylation motif CEW87_11170 PF00311 Phosphoenolpyruvate carboxylase CEW87_11180 PF03900 Porphobilinogen deaminase, C-terminal domain CEW87_11180 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CEW87_11185 PF02602 Uroporphyrinogen-III synthase HemD CEW87_11190 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CEW87_11200 PF01740 STAS domain CEW87_11200 PF00916 Sulfate permease family CEW87_11205 PF09334 tRNA synthetases class I (M) CEW87_11205 PF01588 Putative tRNA binding domain CEW87_11210 PF00691 OmpA family CEW87_11210 PF01389 OmpA-like transmembrane domain CEW87_11215 PF10609 NUBPL iron-transfer P-loop NTPase CEW87_11220 PF00692 dUTPase CEW87_11225 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CEW87_11225 PF01276 Orn/Lys/Arg decarboxylase, major domain CEW87_11225 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CEW87_11230 PF00186 Dihydrofolate reductase CEW87_11235 PF00303 Thymidylate synthase CEW87_11280 PF00639 PPIC-type PPIASE domain CEW87_11285 PF04319 NifZ domain CEW87_11290 PF03206 Nitrogen fixation protein NifW CEW87_11300 PF00132 Bacterial transferase hexapeptide (six repeats) CEW87_11305 PF00682 HMGL-like CEW87_11310 PF00266 Aminotransferase class-V CEW87_11315 PF01592 NifU-like N terminal domain CEW87_11315 PF01106 NifU-like domain CEW87_11315 PF04324 BFD-like [2Fe-2S] binding domain CEW87_11320 PF01521 Iron-sulphur cluster biosynthesis CEW87_11330 PF12838 4Fe-4S dicluster domain CEW87_11340 PF03270 Protein of unknown function, DUF269 CEW87_11350 PF02579 Dinitrogenase iron-molybdenum cofactor CEW87_11355 PF00148 Nitrogenase component 1 type Oxidoreductase CEW87_11360 PF00148 Nitrogenase component 1 type Oxidoreductase CEW87_11385 PF00258 Flavodoxin CEW87_11395 PF00581 Rhodanese-like domain CEW87_11410 PF00999 Sodium/hydrogen exchanger family CEW87_11410 PF02254 TrkA-N domain CEW87_11445 PF02075 Crossover junction endodeoxyribonuclease RuvC CEW87_11450 PF01906 Putative heavy-metal-binding CEW87_11460 PF01709 Transcriptional regulator CEW87_11465 PF05872 Bacterial protein of unknown function (DUF853) CEW87_11470 PF00892 EamA-like transporter family CEW87_11475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW87_11480 PF02219 Methylenetetrahydrofolate reductase CEW87_11485 PF01728 FtsJ-like methyltransferase CEW87_11485 PF01479 S4 domain CEW87_11490 PF00583 Acetyltransferase (GNAT) family CEW87_11490 PF00795 Carbon-nitrogen hydrolase CEW87_11495 PF00583 Acetyltransferase (GNAT) family CEW87_11495 PF00795 Carbon-nitrogen hydrolase CEW87_11500 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CEW87_11500 PF05221 S-adenosyl-L-homocysteine hydrolase CEW87_11505 PF01699 Sodium/calcium exchanger protein CEW87_11510 PF02772 S-adenosylmethionine synthetase, central domain CEW87_11510 PF02773 S-adenosylmethionine synthetase, C-terminal domain CEW87_11510 PF00438 S-adenosylmethionine synthetase, N-terminal domain CEW87_11520 PF03279 Bacterial lipid A biosynthesis acyltransferase CEW87_11530 PF01678 Diaminopimelate epimerase CEW87_11540 PF00589 Phage integrase family CEW87_11540 PF02899 Phage integrase, N-terminal SAM-like domain CEW87_11550 PF17785 PUA-like domain CEW87_11550 PF10672 S-adenosylmethionine-dependent methyltransferase CEW87_11560 PF17864 RuvB AAA lid domain CEW87_11560 PF05496 Holliday junction DNA helicase RuvB P-loop domain CEW87_11560 PF05491 RuvB C-terminal winged helix domain CEW87_11565 PF07499 RuvA, C-terminal domain CEW87_11565 PF01330 RuvA N terminal domain CEW87_11570 PF13419 Haloacid dehalogenase-like hydrolase CEW87_11580 PF10150 Ribonuclease E/G family CEW87_11580 PF00575 S1 RNA binding domain CEW87_11585 PF02545 Maf-like protein CEW87_11590 PF02590 Predicted SPOUT methyltransferase CEW87_11600 PF01467 Cytidylyltransferase-like CEW87_11615 PF01636 Phosphotransferase enzyme family CEW87_11630 PF03641 Possible lysine decarboxylase CEW87_11635 PF01612 3'-5' exonuclease CEW87_11635 PF01367 5'-3' exonuclease, C-terminal SAM fold CEW87_11635 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CEW87_11635 PF00476 DNA polymerase family A CEW87_11640 PF16363 GDP-mannose 4,6 dehydratase CEW87_11645 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEW87_11655 PF03102 NeuB family CEW87_11655 PF08666 SAF domain CEW87_11660 PF02350 UDP-N-acetylglucosamine 2-epimerase CEW87_11665 PF02911 Formyl transferase, C-terminal domain CEW87_11665 PF00551 Formyl transferase CEW87_11665 PF01370 NAD dependent epimerase/dehydratase family CEW87_11675 PF00483 Nucleotidyl transferase CEW87_11685 PF02348 Cytidylyltransferase CEW87_11695 PF02543 Carbamoyltransferase N-terminus CEW87_11695 PF16861 Carbamoyltransferase C-terminus CEW87_11710 PF01209 ubiE/COQ5 methyltransferase family CEW87_11720 PF12464 Maltose acetyltransferase CEW87_11720 PF00132 Bacterial transferase hexapeptide (six repeats) CEW87_11725 PF00132 Bacterial transferase hexapeptide (six repeats) CEW87_11730 PF01370 NAD dependent epimerase/dehydratase family CEW87_11735 PF00535 Glycosyl transferase family 2 CEW87_11740 PF01370 NAD dependent epimerase/dehydratase family CEW87_11745 PF00535 Glycosyl transferase family 2 CEW87_11750 PF00535 Glycosyl transferase family 2 CEW87_11755 PF13439 Glycosyltransferase Family 4 CEW87_11755 PF00534 Glycosyl transferases group 1 CEW87_11760 PF02397 Bacterial sugar transferase CEW87_11770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEW87_11775 PF02719 Polysaccharide biosynthesis protein CEW87_11780 PF16861 Carbamoyltransferase C-terminus CEW87_11780 PF02543 Carbamoyltransferase N-terminus CEW87_11800 PF00860 Permease family CEW87_11820 PF03372 Endonuclease/Exonuclease/phosphatase family CEW87_11825 PF00156 Phosphoribosyl transferase domain CEW87_11835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEW87_11835 PF00384 Molybdopterin oxidoreductase CEW87_11835 PF01568 Molydopterin dinucleotide binding domain CEW87_11840 PF02146 Sir2 family CEW87_11850 PF01042 Endoribonuclease L-PSP CEW87_11855 PF09335 SNARE associated Golgi protein CEW87_11870 PF01171 PP-loop family CEW87_11890 PF12697 Alpha/beta hydrolase family CEW87_11895 PF02798 Glutathione S-transferase, N-terminal domain CEW87_11895 PF00043 Glutathione S-transferase, C-terminal domain CEW87_11905 PF01743 Poly A polymerase head domain CEW87_11905 PF12627 Probable RNA and SrmB- binding site of polymerase A CEW87_11905 PF01966 HD domain CEW87_11920 PF01464 Transglycosylase SLT domain CEW87_11920 PF14718 Soluble lytic murein transglycosylase L domain CEW87_11925 PF01812 5-formyltetrahydrofolate cyclo-ligase family CEW87_11930 PF05231 MASE1 CEW87_11930 PF08447 PAS fold CEW87_11930 PF00563 EAL domain CEW87_11930 PF08448 PAS fold CEW87_11930 PF13426 PAS domain CEW87_11930 PF00990 Diguanylate cyclase, GGDEF domain CEW87_11940 PF00585 C-terminal regulatory domain of Threonine dehydratase CEW87_11940 PF00291 Pyridoxal-phosphate dependent enzyme CEW87_11945 PF02603 HPr Serine kinase N terminus CEW87_11945 PF07475 HPr Serine kinase C-terminal domain CEW87_11950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEW87_11955 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CEW87_11960 PF00309 Sigma-54 factor, Activator interacting domain (AID) CEW87_11960 PF04552 Sigma-54, DNA binding domain CEW87_11960 PF04963 Sigma-54 factor, core binding domain CEW87_11965 PF00005 ABC transporter CEW87_11965 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW87_11970 PF02631 RecX family CEW87_11975 PF00154 recA bacterial DNA recombination protein CEW87_11980 PF02464 Competence-damaged protein CEW87_11985 PF04608 Phosphatidylglycerophosphatase A CEW87_11990 PF00586 AIR synthase related protein, N-terminal domain CEW87_11990 PF02769 AIR synthase related protein, C-terminal domain CEW87_11995 PF00563 EAL domain CEW87_11995 PF00990 Diguanylate cyclase, GGDEF domain CEW87_11995 PF03707 Bacterial signalling protein N terminal repeat CEW87_11995 PF13188 PAS domain CEW87_12010 PF04546 Sigma-70, non-essential region CEW87_12010 PF04542 Sigma-70 region 2 CEW87_12010 PF00140 Sigma-70 factor, region 1.2 CEW87_12010 PF04545 Sigma-70, region 4 CEW87_12010 PF03979 Sigma-70 factor, region 1.1 CEW87_12010 PF04539 Sigma-70 region 3 CEW87_12015 PF01807 CHC2 zinc finger CEW87_12015 PF08278 DNA primase DnaG DnaB-binding CEW87_12015 PF08275 DNA primase catalytic core, N-terminal domain CEW87_12015 PF10410 DnaB-helicase binding domain of primase CEW87_12020 PF01165 Ribosomal protein S21 CEW87_12025 PF00814 Glycoprotease family CEW87_12030 PF02660 Glycerol-3-phosphate acyltransferase CEW87_12045 PF04073 Aminoacyl-tRNA editing domain CEW87_12050 PF02899 Phage integrase, N-terminal SAM-like domain CEW87_12050 PF00589 Phage integrase family CEW87_12055 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEW87_12055 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CEW87_12060 PF00171 Aldehyde dehydrogenase family CEW87_12065 PF06144 DNA polymerase III, delta subunit CEW87_12065 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CEW87_12075 PF00133 tRNA synthetases class I (I, L, M and V) CEW87_12075 PF08264 Anticodon-binding domain of tRNA CEW87_12075 PF09334 tRNA synthetases class I (M) CEW87_12075 PF13603 Leucyl-tRNA synthetase, Domain 2 CEW87_12085 PF13361 UvrD-like helicase C-terminal domain CEW87_12085 PF00580 UvrD/REP helicase N-terminal domain CEW87_12090 PF13614 AAA domain CEW87_12095 PF00390 Malic enzyme, N-terminal domain CEW87_12095 PF03949 Malic enzyme, NAD binding domain CEW87_12095 PF01515 Phosphate acetyl/butaryl transferase CEW87_12105 PF08240 Alcohol dehydrogenase GroES-like domain CEW87_12105 PF00107 Zinc-binding dehydrogenase CEW87_12110 PF05552 Conserved TM helix CEW87_12115 PF02811 PHP domain CEW87_12115 PF14579 Helix-hairpin-helix motif CEW87_12115 PF07733 Bacterial DNA polymerase III alpha NTPase domain CEW87_12115 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CEW87_12115 PF01336 OB-fold nucleic acid binding domain CEW87_12120 PF01218 Coproporphyrinogen III oxidase CEW87_12125 PF07411 Domain of unknown function (DUF1508) CEW87_12130 PF02843 Phosphoribosylglycinamide synthetase, C domain CEW87_12130 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CEW87_12130 PF02844 Phosphoribosylglycinamide synthetase, N domain CEW87_12135 PF01808 AICARFT/IMPCHase bienzyme CEW87_12135 PF02142 MGS-like domain CEW87_12140 PF02954 Bacterial regulatory protein, Fis family CEW87_12145 PF01207 Dihydrouridine synthase (Dus) CEW87_12150 PF01494 FAD binding domain CEW87_12155 PF05195 Aminopeptidase P, N-terminal domain CEW87_12155 PF00557 Metallopeptidase family M24 CEW87_12160 PF00483 Nucleotidyl transferase CEW87_12165 PF01636 Phosphotransferase enzyme family CEW87_12170 PF03968 OstA-like protein CEW87_12170 PF04453 LPS transport system D CEW87_12175 PF00639 PPIC-type PPIASE domain CEW87_12175 PF09312 SurA N-terminal domain CEW87_12180 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CEW87_12185 PF00398 Ribosomal RNA adenine dimethylase CEW87_12205 PF00672 HAMP domain CEW87_12205 PF00909 Ammonium Transporter Family CEW87_12220 PF01432 Peptidase family M3 CEW87_12230 PF01259 SAICAR synthetase CEW87_12245 PF04264 YceI-like domain CEW87_12255 PF01292 Prokaryotic cytochrome b561 CEW87_12260 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CEW87_12265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_12265 PF03466 LysR substrate binding domain CEW87_12270 PF00072 Response regulator receiver domain CEW87_12275 PF17149 Periplasmic sensor domain found in signal transduction proteins CEW87_12275 PF00672 HAMP domain CEW87_12275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_12275 PF00512 His Kinase A (phospho-acceptor) domain CEW87_12275 PF01627 Hpt domain CEW87_12275 PF00072 Response regulator receiver domain CEW87_12280 PF00563 EAL domain CEW87_12280 PF00990 Diguanylate cyclase, GGDEF domain CEW87_12280 PF03707 Bacterial signalling protein N terminal repeat CEW87_12285 PF04303 PrpF protein CEW87_12290 PF04055 Radical SAM superfamily CEW87_12305 PF01116 Fructose-bisphosphate aldolase class-II CEW87_12310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEW87_12310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEW87_12315 PF02779 Transketolase, pyrimidine binding domain CEW87_12315 PF00456 Transketolase, thiamine diphosphate binding domain CEW87_12315 PF02780 Transketolase, C-terminal domain CEW87_12320 PF00485 Phosphoribulokinase / Uridine kinase family CEW87_12325 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CEW87_12330 PF17866 AAA lid domain CEW87_12330 PF00004 ATPase family associated with various cellular activities (AAA) CEW87_12335 PF00101 Ribulose bisphosphate carboxylase, small chain CEW87_12340 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CEW87_12340 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CEW87_12345 PF03466 LysR substrate binding domain CEW87_12345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_12355 PF01116 Fructose-bisphosphate aldolase class-II CEW87_12360 PF00224 Pyruvate kinase, barrel domain CEW87_12360 PF02887 Pyruvate kinase, alpha/beta domain CEW87_12375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_12375 PF00512 His Kinase A (phospho-acceptor) domain CEW87_12380 PF00072 Response regulator receiver domain CEW87_12380 PF00486 Transcriptional regulatory protein, C terminal CEW87_12390 PF00691 OmpA family CEW87_12395 PF00162 Phosphoglycerate kinase CEW87_12405 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEW87_12405 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEW87_12410 PF00456 Transketolase, thiamine diphosphate binding domain CEW87_12410 PF02780 Transketolase, C-terminal domain CEW87_12410 PF02779 Transketolase, pyrimidine binding domain CEW87_12415 PF00485 Phosphoribulokinase / Uridine kinase family CEW87_12425 PF00459 Inositol monophosphatase family CEW87_12430 PF04452 RNA methyltransferase CEW87_12435 PF03976 Polyphosphate kinase 2 (PPK2) CEW87_12440 PF00583 Acetyltransferase (GNAT) family CEW87_12440 PF00696 Amino acid kinase family CEW87_12445 PF03707 Bacterial signalling protein N terminal repeat CEW87_12445 PF00563 EAL domain CEW87_12445 PF00990 Diguanylate cyclase, GGDEF domain CEW87_12450 PF04362 Bacterial Fe(2+) trafficking CEW87_12455 PF01895 PhoU domain CEW87_12460 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CEW87_12465 PF03453 MoeA N-terminal region (domain I and II) CEW87_12465 PF03454 MoeA C-terminal region (domain IV) CEW87_12465 PF00994 Probable molybdopterin binding domain CEW87_12470 PF04305 Protein of unknown function (DUF455) CEW87_12475 PF00034 Cytochrome c CEW87_12480 PF01926 50S ribosome-binding GTPase CEW87_12485 PF00490 Delta-aminolevulinic acid dehydratase CEW87_12495 PF08241 Methyltransferase domain CEW87_12500 PF04055 Radical SAM superfamily CEW87_12500 PF06968 Biotin and Thiamin Synthesis associated domain CEW87_12505 PF00156 Phosphoribosyl transferase domain CEW87_12510 PF00588 SpoU rRNA Methylase family CEW87_12515 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CEW87_12515 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CEW87_12525 PF02556 Preprotein translocase subunit SecB CEW87_12530 PF00462 Glutaredoxin CEW87_12535 PF00581 Rhodanese-like domain CEW87_12545 PF00300 Histidine phosphatase superfamily (branch 1) CEW87_12550 PF01551 Peptidase family M23 CEW87_12555 PF03572 Peptidase family S41 CEW87_12555 PF13180 PDZ domain CEW87_12565 PF00899 ThiF family CEW87_12570 PF01872 RibD C-terminal domain CEW87_12570 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEW87_12575 PF03477 ATP cone domain CEW87_12580 PF00464 Serine hydroxymethyltransferase CEW87_12585 PF00300 Histidine phosphatase superfamily (branch 1) CEW87_12590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_12600 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_12605 PF00999 Sodium/hydrogen exchanger family CEW87_12605 PF02254 TrkA-N domain CEW87_12620 PF00691 OmpA family CEW87_12625 PF01979 Amidohydrolase family CEW87_12630 PF03793 PASTA domain CEW87_12630 PF00069 Protein kinase domain CEW87_12635 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CEW87_12640 PF00762 Ferrochelatase CEW87_12645 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CEW87_12645 PF01628 HrcA protein C terminal domain CEW87_12650 PF01513 ATP-NAD kinase CEW87_12655 PF02463 RecF/RecN/SMC N terminal domain CEW87_12660 PF01475 Ferric uptake regulator family CEW87_12665 PF04355 SmpA / OmlA family CEW87_12670 PF01113 Dihydrodipicolinate reductase, N-terminus CEW87_12670 PF05173 Dihydrodipicolinate reductase, C-terminus CEW87_12675 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEW87_12675 PF00072 Response regulator receiver domain CEW87_12675 PF00672 HAMP domain CEW87_12675 PF01627 Hpt domain CEW87_12675 PF00512 His Kinase A (phospho-acceptor) domain CEW87_12675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_12680 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CEW87_12680 PF00117 Glutamine amidotransferase class-I CEW87_12685 PF02142 MGS-like domain CEW87_12685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEW87_12685 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CEW87_12690 PF01272 Transcription elongation factor, GreA/GreB, C-term CEW87_12690 PF03449 Transcription elongation factor, N-terminal CEW87_12700 PF01985 CRS1 / YhbY (CRM) domain CEW87_12705 PF01728 FtsJ-like methyltransferase CEW87_12710 PF00004 ATPase family associated with various cellular activities (AAA) CEW87_12710 PF01434 Peptidase family M41 CEW87_12710 PF17862 AAA+ lid domain CEW87_12710 PF06480 FtsH Extracellular CEW87_12715 PF00809 Pterin binding enzyme CEW87_12720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEW87_12720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEW87_12720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEW87_12720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEW87_12725 PF12849 PBP superfamily domain CEW87_12730 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_12735 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_12740 PF00005 ABC transporter CEW87_12750 PF00121 Triosephosphate isomerase CEW87_12755 PF03840 Preprotein translocase SecG subunit CEW87_12765 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CEW87_12770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CEW87_12775 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CEW87_12780 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CEW87_12790 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEW87_12790 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CEW87_12790 PF10531 SLBB domain CEW87_12795 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CEW87_12795 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CEW87_12795 PF00384 Molybdopterin oxidoreductase CEW87_12800 PF00146 NADH dehydrogenase CEW87_12805 PF12838 4Fe-4S dicluster domain CEW87_12810 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CEW87_12815 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CEW87_12820 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CEW87_12820 PF00361 Proton-conducting membrane transporter CEW87_12825 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CEW87_12825 PF00361 Proton-conducting membrane transporter CEW87_12830 PF00361 Proton-conducting membrane transporter CEW87_12835 PF00293 NUDIX domain CEW87_12840 PF03976 Polyphosphate kinase 2 (PPK2) CEW87_12845 PF07859 alpha/beta hydrolase fold CEW87_12855 PF00156 Phosphoribosyl transferase domain CEW87_12860 PF13533 Biotin-lipoyl like CEW87_12865 PF00005 ABC transporter CEW87_12880 PF12729 Four helix bundle sensory module for signal transduction CEW87_12880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW87_12880 PF00672 HAMP domain CEW87_12890 PF01145 SPFH domain / Band 7 family CEW87_12890 PF16200 C-terminal region of band_7 CEW87_12900 PF00005 ABC transporter CEW87_12905 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_12910 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_12920 PF07729 FCD domain CEW87_12920 PF00392 Bacterial regulatory proteins, gntR family CEW87_12925 PF00563 EAL domain CEW87_12925 PF04940 Sensors of blue-light using FAD CEW87_12930 PF12833 Helix-turn-helix domain CEW87_12930 PF14525 AraC-binding-like domain CEW87_12940 PF06433 Methylamine dehydrogenase heavy chain (MADH) CEW87_12945 PF07291 Methylamine utilisation protein MauE CEW87_12950 PF00578 AhpC/TSA family CEW87_12955 PF02975 Methylamine dehydrogenase, L chain CEW87_12965 PF07044 Protein of unknown function (DUF1329) CEW87_12975 PF03176 MMPL family CEW87_12990 PF00171 Aldehyde dehydrogenase family CEW87_12995 PF01037 Lrp/AsnC ligand binding domain CEW87_13005 PF01274 Malate synthase CEW87_13010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_13010 PF03466 LysR substrate binding domain CEW87_13015 PF01070 FMN-dependent dehydrogenase CEW87_13020 PF13525 Outer membrane lipoprotein CEW87_13025 PF00849 RNA pseudouridylate synthase CEW87_13040 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CEW87_13045 PF00106 short chain dehydrogenase CEW87_13050 PF00106 short chain dehydrogenase CEW87_13055 PF07879 PHB/PHA accumulation regulator DNA-binding domain CEW87_13055 PF05233 PHB accumulation regulatory domain CEW87_13060 PF04055 Radical SAM superfamily CEW87_13060 PF00919 Uncharacterized protein family UPF0004 CEW87_13060 PF18693 TRAM domain CEW87_13065 PF01734 Patatin-like phospholipase CEW87_13070 PF01565 FAD binding domain CEW87_13070 PF02913 FAD linked oxidases, C-terminal domain CEW87_13105 PF01593 Flavin containing amine oxidoreductase CEW87_13110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW87_13110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW87_13115 PF07497 Rho termination factor, RNA-binding domain CEW87_13115 PF07498 Rho termination factor, N-terminal domain CEW87_13115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEW87_13120 PF00085 Thioredoxin CEW87_13125 PF11953 Domain of unknown function (DUF3470) CEW87_13125 PF00037 4Fe-4S binding domain CEW87_13135 PF00501 AMP-binding enzyme CEW87_13135 PF13193 AMP-binding enzyme C-terminal domain CEW87_13140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEW87_13140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEW87_13140 PF00205 Thiamine pyrophosphate enzyme, central domain CEW87_13145 PF01842 ACT domain CEW87_13150 PF01264 Chorismate synthase CEW87_13155 PF12832 MFS_1 like family CEW87_13160 PF01435 Peptidase family M48 CEW87_13165 PF00330 Aconitase family (aconitate hydratase) CEW87_13170 PF00694 Aconitase C-terminal domain CEW87_13175 PF00180 Isocitrate/isopropylmalate dehydrogenase CEW87_13180 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEW87_13180 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEW87_13195 PF01416 tRNA pseudouridine synthase CEW87_13200 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CEW87_13205 PF00291 Pyridoxal-phosphate dependent enzyme CEW87_13210 PF00290 Tryptophan synthase alpha chain CEW87_13215 PF01039 Carboxyl transferase domain CEW87_13215 PF17848 Acetyl-coA carboxylase zinc finger domain CEW87_13220 PF08245 Mur ligase middle domain CEW87_13220 PF02875 Mur ligase family, glutamate ligase domain CEW87_13235 PF00156 Phosphoribosyl transferase domain CEW87_13240 PF01053 Cys/Met metabolism PLP-dependent enzyme CEW87_13245 PF00571 CBS domain CEW87_13245 PF03448 MgtE intracellular N domain CEW87_13245 PF01769 Divalent cation transporter CEW87_13255 PF00149 Calcineurin-like phosphoesterase CEW87_13260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEW87_13265 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEW87_13270 PF01406 tRNA synthetases class I (C) catalytic domain CEW87_13270 PF09190 DALR domain CEW87_13280 PF00226 DnaJ domain CEW87_13280 PF00684 DnaJ central domain CEW87_13280 PF01556 DnaJ C terminal domain CEW87_13285 PF00012 Hsp70 protein CEW87_13290 PF01025 GrpE CEW87_13295 PF03989 DNA gyrase C-terminal domain, beta-propeller CEW87_13295 PF00521 DNA gyrase/topoisomerase IV, subunit A CEW87_13300 PF00266 Aminotransferase class-V CEW87_13305 PF01842 ACT domain CEW87_13305 PF01817 Chorismate mutase type II CEW87_13305 PF00800 Prephenate dehydratase CEW87_13310 PF00155 Aminotransferase class I and II CEW87_13315 PF01842 ACT domain CEW87_13315 PF02153 Prephenate dehydrogenase CEW87_13320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEW87_13325 PF00575 S1 RNA binding domain CEW87_13330 PF00216 Bacterial DNA-binding protein CEW87_13340 PF18073 Rubredoxin metal binding domain CEW87_13345 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEW87_13345 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEW87_13345 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEW87_13350 PF00291 Pyridoxal-phosphate dependent enzyme CEW87_13380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEW87_13380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEW87_13380 PF02824 TGS domain CEW87_13380 PF03129 Anticodon binding domain CEW87_13385 PF05198 Translation initiation factor IF-3, N-terminal domain CEW87_13385 PF00707 Translation initiation factor IF-3, C-terminal domain CEW87_13390 PF01632 Ribosomal protein L35 CEW87_13395 PF00453 Ribosomal protein L20 CEW87_13400 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CEW87_13400 PF01409 tRNA synthetases class II core domain (F) CEW87_13405 PF03483 B3/4 domain CEW87_13405 PF03484 tRNA synthetase B5 domain CEW87_13405 PF03147 Ferredoxin-fold anticodon binding domain CEW87_13405 PF01588 Putative tRNA binding domain CEW87_13405 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CEW87_13410 PF00216 Bacterial DNA-binding protein CEW87_13430 PF00293 NUDIX domain CEW87_13435 PF00403 Heavy-metal-associated domain CEW87_13435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEW87_13435 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_13440 PF00375 Sodium:dicarboxylate symporter family CEW87_13445 PF03313 Serine dehydratase alpha chain CEW87_13445 PF03315 Serine dehydratase beta chain CEW87_13450 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CEW87_13450 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CEW87_13455 PF00374 Nickel-dependent hydrogenase CEW87_13460 PF01292 Prokaryotic cytochrome b561 CEW87_13470 PF01750 Hydrogenase maturation protease CEW87_13475 PF01455 HupF/HypC family CEW87_13485 PF04809 HupH hydrogenase expression protein, C-terminal conserved region CEW87_13490 PF00301 Rubredoxin CEW87_13495 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CEW87_13505 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CEW87_13510 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEW87_13515 PF00708 Acylphosphatase CEW87_13515 PF01300 Telomere recombination CEW87_13515 PF07503 HypF finger CEW87_13515 PF17788 HypF Kae1-like domain CEW87_13520 PF01455 HupF/HypC family CEW87_13525 PF01924 Hydrogenase formation hypA family CEW87_13530 PF02769 AIR synthase related protein, C-terminal domain CEW87_13530 PF00586 AIR synthase related protein, N-terminal domain CEW87_13535 PF02911 Formyl transferase, C-terminal domain CEW87_13535 PF00551 Formyl transferase CEW87_13535 PF00378 Enoyl-CoA hydratase/isomerase CEW87_13540 PF02954 Bacterial regulatory protein, Fis family CEW87_13540 PF00072 Response regulator receiver domain CEW87_13540 PF00158 Sigma-54 interaction domain CEW87_13545 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CEW87_13545 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CEW87_13550 PF00374 Nickel-dependent hydrogenase CEW87_13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_13555 PF00989 PAS fold CEW87_13555 PF00512 His Kinase A (phospho-acceptor) domain CEW87_13560 PF04955 HupE / UreJ protein CEW87_13565 PF01975 Survival protein SurE CEW87_13575 PF01551 Peptidase family M23 CEW87_13575 PF01476 LysM domain CEW87_13580 PF04539 Sigma-70 region 3 CEW87_13580 PF00140 Sigma-70 factor, region 1.2 CEW87_13580 PF04542 Sigma-70 region 2 CEW87_13580 PF04545 Sigma-70, region 4 CEW87_13585 PF13406 Transglycosylase SLT domain CEW87_13590 PF01841 Transglutaminase-like superfamily CEW87_13590 PF13559 Domain of unknown function (DUF4129) CEW87_13590 PF11992 Domain of unknown function (DUF3488) CEW87_13600 PF17863 AAA lid domain CEW87_13600 PF07726 ATPase family associated with various cellular activities (AAA) CEW87_13605 PF00850 Histone deacetylase domain CEW87_13610 PF00701 Dihydrodipicolinate synthetase family CEW87_13615 PF06804 NlpB/DapX lipoprotein CEW87_13630 PF08007 Cupin superfamily protein CEW87_13635 PF05958 tRNA (Uracil-5-)-methyltransferase CEW87_13645 PF10672 S-adenosylmethionine-dependent methyltransferase CEW87_13645 PF17785 PUA-like domain CEW87_13650 PF00202 Aminotransferase class-III CEW87_13655 PF00171 Aldehyde dehydrogenase family CEW87_13660 PF07687 Peptidase dimerisation domain CEW87_13660 PF01546 Peptidase family M20/M25/M40 CEW87_13665 PF01425 Amidase CEW87_13670 PF00005 ABC transporter CEW87_13670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW87_13675 PF00005 ABC transporter CEW87_13675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW87_13680 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW87_13680 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_13685 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_13690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW87_13695 PF03466 LysR substrate binding domain CEW87_13695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_13700 PF00849 RNA pseudouridylate synthase CEW87_13710 PF01312 FlhB HrpN YscU SpaS Family CEW87_13715 PF00771 FHIPEP family CEW87_13720 PF00448 SRP54-type protein, GTPase domain CEW87_13730 PF04539 Sigma-70 region 3 CEW87_13730 PF04542 Sigma-70 region 2 CEW87_13730 PF04545 Sigma-70, region 4 CEW87_13735 PF01618 MotA/TolQ/ExbB proton channel family CEW87_13740 PF00691 OmpA family CEW87_13740 PF13677 Membrane MotB of proton-channel complex MotA/MotB CEW87_13745 PF00521 DNA gyrase/topoisomerase IV, subunit A CEW87_13755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_13755 PF01751 Toprim domain CEW87_13755 PF00204 DNA gyrase B CEW87_13755 PF00986 DNA gyrase B subunit, carboxyl terminus CEW87_13770 PF13144 Chaperone for flagella basal body P-ring formation CEW87_13770 PF17656 FlgA N-terminal domain CEW87_13775 PF00460 Flagella basal body rod protein CEW87_13780 PF00460 Flagella basal body rod protein CEW87_13780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEW87_13785 PF03963 Flagellar hook capping protein - N-terminal region CEW87_13785 PF13861 FlgD Tudor-like domain CEW87_13785 PF13860 FlgD Ig-like domain CEW87_13790 PF00460 Flagella basal body rod protein CEW87_13790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEW87_13790 PF07559 Flagellar basal body protein FlaE CEW87_13795 PF00460 Flagella basal body rod protein CEW87_13795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEW87_13800 PF00460 Flagella basal body rod protein CEW87_13800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEW87_13805 PF02107 Flagellar L-ring protein CEW87_13810 PF02119 Flagellar P-ring protein CEW87_13815 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CEW87_13815 PF10135 Rod binding protein CEW87_13820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEW87_13820 PF00460 Flagella basal body rod protein CEW87_13825 PF00669 Bacterial flagellin N-terminal helical region CEW87_13835 PF01311 Bacterial export proteins, family 1 CEW87_13840 PF01313 Bacterial export proteins, family 3 CEW87_13845 PF00813 FliP family CEW87_13855 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEW87_13855 PF16973 Flagellar motor switch protein FliN N-terminal CEW87_13860 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEW87_13860 PF02154 Flagellar motor switch protein FliM CEW87_13870 PF02120 Flagellar hook-length control protein FliK CEW87_13880 PF00990 Diguanylate cyclase, GGDEF domain CEW87_13885 PF00990 Diguanylate cyclase, GGDEF domain CEW87_13890 PF01497 Periplasmic binding protein CEW87_13895 PF18030 RimK PreATP-grasp domain CEW87_13895 PF08443 RimK-like ATP-grasp domain CEW87_13900 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW87_13905 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_13910 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_13915 PF00005 ABC transporter CEW87_13925 PF00691 OmpA family CEW87_13925 PF04972 BON domain CEW87_13940 PF07690 Major Facilitator Superfamily CEW87_13950 PF02146 Sir2 family CEW87_13955 PF00939 Sodium:sulfate symporter transmembrane region CEW87_13960 PF00005 ABC transporter CEW87_14015 PF00271 Helicase conserved C-terminal domain CEW87_14015 PF00176 SNF2 family N-terminal domain CEW87_14065 PF17761 DUF1016 N-terminal domain CEW87_14065 PF06250 YhcG PDDEXK nuclease domain CEW87_14070 PF00570 HRDC domain CEW87_14070 PF09382 RQC domain CEW87_14070 PF00271 Helicase conserved C-terminal domain CEW87_14070 PF16124 RecQ zinc-binding CEW87_14070 PF00270 DEAD/DEAH box helicase CEW87_14080 PF09957 Bacterial antitoxin of type II TA system, VapB CEW87_14085 PF01850 PIN domain CEW87_14105 PF01966 HD domain CEW87_14115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEW87_14115 PF00512 His Kinase A (phospho-acceptor) domain CEW87_14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_14115 PF01627 Hpt domain CEW87_14115 PF00072 Response regulator receiver domain CEW87_14115 PF00672 HAMP domain CEW87_14120 PF00672 HAMP domain CEW87_14120 PF00072 Response regulator receiver domain CEW87_14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_14120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEW87_14120 PF00512 His Kinase A (phospho-acceptor) domain CEW87_14120 PF01627 Hpt domain CEW87_14125 PF00211 Adenylate and Guanylate cyclase catalytic domain CEW87_14125 PF00072 Response regulator receiver domain CEW87_14135 PF00990 Diguanylate cyclase, GGDEF domain CEW87_14135 PF00563 EAL domain CEW87_14135 PF13188 PAS domain CEW87_14135 PF03707 Bacterial signalling protein N terminal repeat CEW87_14145 PF01323 DSBA-like thioredoxin domain CEW87_14150 PF00117 Glutamine amidotransferase class-I CEW87_14150 PF06418 CTP synthase N-terminus CEW87_14155 PF00793 DAHP synthetase I family CEW87_14160 PF03952 Enolase, N-terminal domain CEW87_14160 PF00113 Enolase, C-terminal TIM barrel domain CEW87_14165 PF04977 Septum formation initiator CEW87_14175 PF00877 NlpC/P60 family CEW87_14185 PF00892 EamA-like transporter family CEW87_14190 PF00132 Bacterial transferase hexapeptide (six repeats) CEW87_14210 PF07690 Major Facilitator Superfamily CEW87_14215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_14215 PF03466 LysR substrate binding domain CEW87_14230 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CEW87_14230 PF00056 lactate/malate dehydrogenase, NAD binding domain CEW87_14235 PF00392 Bacterial regulatory proteins, gntR family CEW87_14235 PF07702 UTRA domain CEW87_14250 PF02910 Fumarate reductase flavoprotein C-term CEW87_14250 PF00890 FAD binding domain CEW87_14255 PF13085 2Fe-2S iron-sulfur cluster binding domain CEW87_14260 PF03937 Flavinator of succinate dehydrogenase CEW87_14265 PF00285 Citrate synthase, C-terminal domain CEW87_14270 PF02779 Transketolase, pyrimidine binding domain CEW87_14270 PF16078 2-oxoglutarate dehydrogenase N-terminus CEW87_14270 PF00676 Dehydrogenase E1 component CEW87_14270 PF16870 2-oxoglutarate dehydrogenase C-terminal CEW87_14275 PF02817 e3 binding domain CEW87_14275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEW87_14275 PF00364 Biotin-requiring enzyme CEW87_14280 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_14280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEW87_14285 PF03969 AFG1-like ATPase CEW87_14310 PF07963 Prokaryotic N-terminal methylation motif CEW87_14310 PF11612 Type II secretion system (T2SS), protein J CEW87_14320 PF12019 Type II transport protein GspH CEW87_14320 PF07963 Prokaryotic N-terminal methylation motif CEW87_14325 PF08334 Type II secretion system (T2SS), protein G CEW87_14325 PF07963 Prokaryotic N-terminal methylation motif CEW87_14330 PF00482 Type II secretion system (T2SS), protein F CEW87_14335 PF00437 Type II/IV secretion system protein CEW87_14340 PF03958 Bacterial type II/III secretion system short domain CEW87_14340 PF00263 Bacterial type II and III secretion system protein CEW87_14355 PF04851 Type III restriction enzyme, res subunit CEW87_14355 PF13307 Helicase C-terminal domain CEW87_14360 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CEW87_14365 PF00994 Probable molybdopterin binding domain CEW87_14365 PF03453 MoeA N-terminal region (domain I and II) CEW87_14365 PF03454 MoeA C-terminal region (domain IV) CEW87_14370 PF02597 ThiS family CEW87_14375 PF02391 MoaE protein CEW87_14385 PF01476 LysM domain CEW87_14385 PF01464 Transglycosylase SLT domain CEW87_14390 PF00360 Phytochrome region CEW87_14390 PF01590 GAF domain CEW87_14390 PF00990 Diguanylate cyclase, GGDEF domain CEW87_14390 PF00563 EAL domain CEW87_14395 PF00072 Response regulator receiver domain CEW87_14395 PF03861 ANTAR domain CEW87_14400 PF16123 Hydroxyacylglutathione hydrolase C-terminus CEW87_14400 PF00753 Metallo-beta-lactamase superfamily CEW87_14405 PF08241 Methyltransferase domain CEW87_14410 PF00075 RNase H CEW87_14415 PF00929 Exonuclease CEW87_14420 PF00571 CBS domain CEW87_14435 PF05190 MutS family domain IV CEW87_14435 PF05192 MutS domain III CEW87_14435 PF05188 MutS domain II CEW87_14435 PF01624 MutS domain I CEW87_14435 PF00488 MutS domain V CEW87_14445 PF00691 OmpA family CEW87_14445 PF04972 BON domain CEW87_14460 PF13539 D-alanyl-D-alanine carboxypeptidase CEW87_14470 PF00581 Rhodanese-like domain CEW87_14485 PF05981 CreA protein CEW87_14495 PF00403 Heavy-metal-associated domain CEW87_14500 PF13411 MerR HTH family regulatory protein CEW87_14510 PF00563 EAL domain CEW87_14510 PF03707 Bacterial signalling protein N terminal repeat CEW87_14510 PF00990 Diguanylate cyclase, GGDEF domain CEW87_14520 PF00672 HAMP domain CEW87_14520 PF17200 Single Cache domain 2 CEW87_14520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW87_14530 PF00080 Copper/zinc superoxide dismutase (SODC) CEW87_14540 PF00571 CBS domain CEW87_14540 PF00005 ABC transporter CEW87_14545 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_14550 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEW87_14555 PF00291 Pyridoxal-phosphate dependent enzyme CEW87_14565 PF01145 SPFH domain / Band 7 family CEW87_14565 PF16200 C-terminal region of band_7 CEW87_14580 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_14590 PF00072 Response regulator receiver domain CEW87_14590 PF00196 Bacterial regulatory proteins, luxR family CEW87_14595 PF01339 CheB methylesterase CEW87_14595 PF01739 CheR methyltransferase, SAM binding domain CEW87_14595 PF08448 PAS fold CEW87_14595 PF03705 CheR methyltransferase, all-alpha domain CEW87_14610 PF01292 Prokaryotic cytochrome b561 CEW87_14630 PF02322 Cytochrome bd terminal oxidase subunit II CEW87_14635 PF01654 Cytochrome bd terminal oxidase subunit I CEW87_14645 PF00072 Response regulator receiver domain CEW87_14645 PF00158 Sigma-54 interaction domain CEW87_14645 PF02954 Bacterial regulatory protein, Fis family CEW87_14650 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CEW87_14650 PF00355 Rieske [2Fe-2S] domain CEW87_14670 PF10417 C-terminal domain of 1-Cys peroxiredoxin CEW87_14670 PF00578 AhpC/TSA family CEW87_14680 PF16123 Hydroxyacylglutathione hydrolase C-terminus CEW87_14680 PF00753 Metallo-beta-lactamase superfamily CEW87_14685 PF00175 Oxidoreductase NAD-binding domain CEW87_14685 PF00970 Oxidoreductase FAD-binding domain CEW87_14695 PF00364 Biotin-requiring enzyme CEW87_14695 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEW87_14695 PF02817 e3 binding domain CEW87_14700 PF00456 Transketolase, thiamine diphosphate binding domain CEW87_14700 PF17831 Pyruvate dehydrogenase E1 component middle domain CEW87_14705 PF01037 Lrp/AsnC ligand binding domain CEW87_14710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEW87_14710 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_14715 PF01053 Cys/Met metabolism PLP-dependent enzyme CEW87_14720 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CEW87_14725 PF01321 Creatinase/Prolidase N-terminal domain CEW87_14725 PF00557 Metallopeptidase family M24 CEW87_14730 PF00557 Metallopeptidase family M24 CEW87_14730 PF01321 Creatinase/Prolidase N-terminal domain CEW87_14735 PF02423 Ornithine cyclodeaminase/mu-crystallin family CEW87_14740 PF00155 Aminotransferase class I and II CEW87_14740 PF00392 Bacterial regulatory proteins, gntR family CEW87_14745 PF00291 Pyridoxal-phosphate dependent enzyme CEW87_14755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_14760 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CEW87_14765 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_14780 PF03734 L,D-transpeptidase catalytic domain CEW87_14780 PF01471 Putative peptidoglycan binding domain CEW87_14795 PF01274 Malate synthase CEW87_14800 PF01925 Sulfite exporter TauE/SafE CEW87_14805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_14805 PF03466 LysR substrate binding domain CEW87_14810 PF03928 Haem-degrading CEW87_14815 PF05161 MOFRL family CEW87_14815 PF13660 Domain of unknown function (DUF4147) CEW87_14825 PF01261 Xylose isomerase-like TIM barrel CEW87_14830 PF00892 EamA-like transporter family CEW87_14835 PF04115 Ureidoglycolate lyase CEW87_14840 PF03561 Allantoicase repeat CEW87_14845 PF07840 FadR C-terminal domain CEW87_14845 PF00392 Bacterial regulatory proteins, gntR family CEW87_14850 PF01177 Asp/Glu/Hydantoin racemase CEW87_14855 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CEW87_14865 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CEW87_14870 PF04115 Ureidoglycolate lyase CEW87_14875 PF03561 Allantoicase repeat CEW87_14880 PF01014 Uricase CEW87_14880 PF09349 OHCU decarboxylase CEW87_14890 PF00576 HIUase/Transthyretin family CEW87_14895 PF00072 Response regulator receiver domain CEW87_14905 PF03773 Predicted permease CEW87_14930 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CEW87_14930 PF18381 YcaO cyclodehydratase C-terminal domain CEW87_14950 PF00440 Bacterial regulatory proteins, tetR family CEW87_14970 PF03458 UPF0126 domain CEW87_15015 PF07690 Major Facilitator Superfamily CEW87_15020 PF00202 Aminotransferase class-III CEW87_15025 PF00756 Putative esterase CEW87_15030 PF00107 Zinc-binding dehydrogenase CEW87_15030 PF08240 Alcohol dehydrogenase GroES-like domain CEW87_15035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_15035 PF03466 LysR substrate binding domain CEW87_15040 PF00106 short chain dehydrogenase CEW87_15045 PF00403 Heavy-metal-associated domain CEW87_15055 PF00115 Cytochrome C and Quinol oxidase polypeptide I CEW87_15070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEW87_15070 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CEW87_15075 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CEW87_15075 PF13746 4Fe-4S dicluster domain CEW87_15075 PF12801 4Fe-4S binding domain CEW87_15100 PF00753 Metallo-beta-lactamase superfamily CEW87_15100 PF10996 Beta-Casp domain CEW87_15100 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CEW87_15105 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CEW87_15105 PF00561 alpha/beta hydrolase fold CEW87_15110 PF00027 Cyclic nucleotide-binding domain CEW87_15110 PF13545 Crp-like helix-turn-helix domain CEW87_15115 PF04247 Invasion gene expression up-regulator, SirB CEW87_15120 PF00027 Cyclic nucleotide-binding domain CEW87_15120 PF13545 Crp-like helix-turn-helix domain CEW87_15125 PF06969 HemN C-terminal domain CEW87_15125 PF04055 Radical SAM superfamily CEW87_15135 PF09278 MerR, DNA binding CEW87_15135 PF00376 MerR family regulatory protein CEW87_15140 PF00403 Heavy-metal-associated domain CEW87_15150 PF00719 Inorganic pyrophosphatase CEW87_15165 PF00107 Zinc-binding dehydrogenase CEW87_15165 PF16884 N-terminal domain of oxidoreductase CEW87_15170 PF00465 Iron-containing alcohol dehydrogenase CEW87_15175 PF16925 Tetracyclin repressor-like, C-terminal domain CEW87_15175 PF00440 Bacterial regulatory proteins, tetR family CEW87_15190 PF00795 Carbon-nitrogen hydrolase CEW87_15190 PF02540 NAD synthase CEW87_15195 PF00543 Nitrogen regulatory protein P-II CEW87_15200 PF01713 Smr domain CEW87_15205 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_15215 PF00027 Cyclic nucleotide-binding domain CEW87_15215 PF13545 Crp-like helix-turn-helix domain CEW87_15220 PF09397 Ftsk gamma domain CEW87_15220 PF17854 FtsK alpha domain CEW87_15220 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CEW87_15220 PF01580 FtsK/SpoIIIE family CEW87_15225 PF03548 Outer membrane lipoprotein carrier protein LolA CEW87_15230 PF12002 MgsA AAA+ ATPase C terminal CEW87_15230 PF16193 AAA C-terminal domain CEW87_15230 PF00004 ATPase family associated with various cellular activities (AAA) CEW87_15240 PF02403 Seryl-tRNA synthetase N-terminal domain CEW87_15240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEW87_15245 PF01464 Transglycosylase SLT domain CEW87_15245 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW87_15250 PF02627 Carboxymuconolactone decarboxylase family CEW87_15290 PF02796 Helix-turn-helix domain of resolvase CEW87_15290 PF00239 Resolvase, N terminal domain CEW87_15305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_15305 PF03466 LysR substrate binding domain CEW87_15310 PF03601 Conserved hypothetical protein 698 CEW87_15320 PF00392 Bacterial regulatory proteins, gntR family CEW87_15320 PF07702 UTRA domain CEW87_15325 PF02910 Fumarate reductase flavoprotein C-term CEW87_15325 PF00890 FAD binding domain CEW87_15340 PF00037 4Fe-4S binding domain CEW87_15340 PF11953 Domain of unknown function (DUF3470) CEW87_15345 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEW87_15350 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_15355 PF00005 ABC transporter CEW87_15365 PF00970 Oxidoreductase FAD-binding domain CEW87_15365 PF00175 Oxidoreductase NAD-binding domain CEW87_15370 PF01012 Electron transfer flavoprotein domain CEW87_15375 PF00766 Electron transfer flavoprotein FAD-binding domain CEW87_15375 PF01012 Electron transfer flavoprotein domain CEW87_15385 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_15390 PF00005 ABC transporter CEW87_15390 PF00571 CBS domain CEW87_15395 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_15400 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEW87_15405 PF02540 NAD synthase CEW87_15405 PF00795 Carbon-nitrogen hydrolase CEW87_15410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW87_15410 PF02770 Acyl-CoA dehydrogenase, middle domain CEW87_15410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW87_15415 PF13193 AMP-binding enzyme C-terminal domain CEW87_15415 PF00501 AMP-binding enzyme CEW87_15420 PF00378 Enoyl-CoA hydratase/isomerase CEW87_15440 PF01152 Bacterial-like globin CEW87_15450 PF02535 ZIP Zinc transporter CEW87_15455 PF06628 Catalase-related immune-responsive CEW87_15455 PF00199 Catalase CEW87_15470 PF00970 Oxidoreductase FAD-binding domain CEW87_15470 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_15470 PF00175 Oxidoreductase NAD-binding domain CEW87_15475 PF00486 Transcriptional regulatory protein, C terminal CEW87_15475 PF00072 Response regulator receiver domain CEW87_15480 PF00512 His Kinase A (phospho-acceptor) domain CEW87_15480 PF08521 Two-component sensor kinase N-terminal CEW87_15480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_15495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_15495 PF05384 Sensor protein DegS CEW87_15495 PF07730 Histidine kinase CEW87_15500 PF00072 Response regulator receiver domain CEW87_15500 PF00196 Bacterial regulatory proteins, luxR family CEW87_15505 PF09456 RcsC Alpha-Beta-Loop (ABL) CEW87_15505 PF00512 His Kinase A (phospho-acceptor) domain CEW87_15505 PF00072 Response regulator receiver domain CEW87_15505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_15520 PF01180 Dihydroorotate dehydrogenase CEW87_15535 PF01966 HD domain CEW87_15540 PF13746 4Fe-4S dicluster domain CEW87_15540 PF12801 4Fe-4S binding domain CEW87_15540 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CEW87_15545 PF00155 Aminotransferase class I and II CEW87_15545 PF00392 Bacterial regulatory proteins, gntR family CEW87_15550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_15550 PF03466 LysR substrate binding domain CEW87_15565 PF00330 Aconitase family (aconitate hydratase) CEW87_15570 PF00694 Aconitase C-terminal domain CEW87_15580 PF03466 LysR substrate binding domain CEW87_15580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_15585 PF04303 PrpF protein CEW87_15605 PF02515 CoA-transferase family III CEW87_15610 PF03328 HpcH/HpaI aldolase/citrate lyase family CEW87_15615 PF10397 Adenylosuccinate lyase C-terminus CEW87_15615 PF00206 Lyase CEW87_15620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_15620 PF03466 LysR substrate binding domain CEW87_15625 PF03358 NADPH-dependent FMN reductase CEW87_15625 PF00890 FAD binding domain CEW87_15625 PF04205 FMN-binding domain CEW87_15635 PF07690 Major Facilitator Superfamily CEW87_15640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW87_15640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEW87_15645 PF04303 PrpF protein CEW87_15650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_15650 PF03466 LysR substrate binding domain CEW87_15670 PF05368 NmrA-like family CEW87_15675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_15675 PF03466 LysR substrate binding domain CEW87_15690 PF04262 Glutamate-cysteine ligase CEW87_15755 PF16450 Proteasomal ATPase OB C-terminal domain CEW87_15755 PF00004 ATPase family associated with various cellular activities (AAA) CEW87_15755 PF17758 Proteasomal ATPase OB N-terminal domain CEW87_15790 PF00563 EAL domain CEW87_15790 PF03707 Bacterial signalling protein N terminal repeat CEW87_15790 PF00990 Diguanylate cyclase, GGDEF domain CEW87_15800 PF13180 PDZ domain CEW87_15805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_15805 PF00512 His Kinase A (phospho-acceptor) domain CEW87_15805 PF08521 Two-component sensor kinase N-terminal CEW87_15810 PF00486 Transcriptional regulatory protein, C terminal CEW87_15810 PF00072 Response regulator receiver domain CEW87_15830 PF00990 Diguanylate cyclase, GGDEF domain CEW87_15830 PF13426 PAS domain CEW87_15830 PF00563 EAL domain CEW87_15845 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEW87_15860 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_15870 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_15875 PF01266 FAD dependent oxidoreductase CEW87_15885 PF00392 Bacterial regulatory proteins, gntR family CEW87_15885 PF00155 Aminotransferase class I and II CEW87_15890 PF05690 Thiazole biosynthesis protein ThiG CEW87_15900 PF13667 ThiC-associated domain CEW87_15900 PF01964 Radical SAM ThiC family CEW87_15905 PF03601 Conserved hypothetical protein 698 CEW87_15910 PF00205 Thiamine pyrophosphate enzyme, central domain CEW87_15910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEW87_15910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEW87_15915 PF09339 IclR helix-turn-helix domain CEW87_15915 PF01614 Bacterial transcriptional regulator CEW87_15920 PF12556 Cobaltochelatase CobS subunit N terminal CEW87_15920 PF08406 CbbQ/NirQ/NorQ C-terminal CEW87_15920 PF07728 AAA domain (dynein-related subfamily) CEW87_15925 PF06213 Cobalamin biosynthesis protein CobT CEW87_15925 PF11775 Cobalamin biosynthesis protein CobT VWA domain CEW87_15945 PF03707 Bacterial signalling protein N terminal repeat CEW87_15945 PF00990 Diguanylate cyclase, GGDEF domain CEW87_15945 PF00563 EAL domain CEW87_15950 PF00892 EamA-like transporter family CEW87_15970 PF00871 Acetokinase family CEW87_15975 PF04972 BON domain CEW87_15995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_16010 PF00732 GMC oxidoreductase CEW87_16010 PF05199 GMC oxidoreductase CEW87_16015 PF09339 IclR helix-turn-helix domain CEW87_16015 PF01614 Bacterial transcriptional regulator CEW87_16020 PF01925 Sulfite exporter TauE/SafE CEW87_16025 PF01515 Phosphate acetyl/butaryl transferase CEW87_16030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEW87_16030 PF00205 Thiamine pyrophosphate enzyme, central domain CEW87_16030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEW87_16035 PF09339 IclR helix-turn-helix domain CEW87_16035 PF01614 Bacterial transcriptional regulator CEW87_16040 PF01266 FAD dependent oxidoreductase CEW87_16045 PF01327 Polypeptide deformylase CEW87_16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_16055 PF03466 LysR substrate binding domain CEW87_16060 PF02770 Acyl-CoA dehydrogenase, middle domain CEW87_16060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW87_16060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW87_16065 PF02515 CoA-transferase family III CEW87_16070 PF01012 Electron transfer flavoprotein domain CEW87_16075 PF00766 Electron transfer flavoprotein FAD-binding domain CEW87_16075 PF01012 Electron transfer flavoprotein domain CEW87_16080 PF03797 Autotransporter beta-domain CEW87_16080 PF00657 GDSL-like Lipase/Acylhydrolase CEW87_16085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW87_16085 PF00672 HAMP domain CEW87_16085 PF12729 Four helix bundle sensory module for signal transduction CEW87_16100 PF05114 Protein of unknown function (DUF692) CEW87_16125 PF00171 Aldehyde dehydrogenase family CEW87_16125 PF01575 MaoC like domain CEW87_16145 PF00005 ABC transporter CEW87_16150 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW87_16150 PF00005 ABC transporter CEW87_16160 PF02653 Branched-chain amino acid transport system / permease component CEW87_16170 PF00501 AMP-binding enzyme CEW87_16170 PF13193 AMP-binding enzyme C-terminal domain CEW87_16175 PF00596 Class II Aldolase and Adducin N-terminal domain CEW87_16180 PF08546 Ketopantoate reductase PanE/ApbA C terminal CEW87_16180 PF02558 Ketopantoate reductase PanE/ApbA CEW87_16185 PF00005 ABC transporter CEW87_16190 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW87_16190 PF00005 ABC transporter CEW87_16210 PF04199 Putative cyclase CEW87_16215 PF00106 short chain dehydrogenase CEW87_16225 PF00501 AMP-binding enzyme CEW87_16225 PF13193 AMP-binding enzyme C-terminal domain CEW87_16230 PF00866 Ring hydroxylating beta subunit CEW87_16235 PF00355 Rieske [2Fe-2S] domain CEW87_16235 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CEW87_16240 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_16260 PF04199 Putative cyclase CEW87_16265 PF00355 Rieske [2Fe-2S] domain CEW87_16265 PF11723 Homotrimeric ring hydroxylase CEW87_16270 PF00561 alpha/beta hydrolase fold CEW87_16270 PF00364 Biotin-requiring enzyme CEW87_16275 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CEW87_16280 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEW87_16285 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CEW87_16285 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEW87_16290 PF00682 HMGL-like CEW87_16290 PF07836 DmpG-like communication domain CEW87_16295 PF00107 Zinc-binding dehydrogenase CEW87_16295 PF08240 Alcohol dehydrogenase GroES-like domain CEW87_16305 PF07729 FCD domain CEW87_16305 PF00392 Bacterial regulatory proteins, gntR family CEW87_16310 PF00561 alpha/beta hydrolase fold CEW87_16320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEW87_16325 PF12833 Helix-turn-helix domain CEW87_16325 PF14525 AraC-binding-like domain CEW87_16330 PF14525 AraC-binding-like domain CEW87_16330 PF12833 Helix-turn-helix domain CEW87_16335 PF17885 Styrene monooxygenase A putative substrate binding domain CEW87_16345 PF01613 Flavin reductase like domain CEW87_16350 PF00355 Rieske [2Fe-2S] domain CEW87_16350 PF11723 Homotrimeric ring hydroxylase CEW87_16355 PF00970 Oxidoreductase FAD-binding domain CEW87_16355 PF00175 Oxidoreductase NAD-binding domain CEW87_16355 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_16365 PF01177 Asp/Glu/Hydantoin racemase CEW87_16370 PF01425 Amidase CEW87_16375 PF01425 Amidase CEW87_16395 PF03466 LysR substrate binding domain CEW87_16395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_16420 PF12833 Helix-turn-helix domain CEW87_16420 PF14525 AraC-binding-like domain CEW87_16430 PF12800 4Fe-4S binding domain CEW87_16430 PF13247 4Fe-4S dicluster domain CEW87_16435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEW87_16435 PF01568 Molydopterin dinucleotide binding domain CEW87_16435 PF00384 Molybdopterin oxidoreductase CEW87_16445 PF00296 Luciferase-like monooxygenase CEW87_16450 PF01613 Flavin reductase like domain CEW87_16455 PF00881 Nitroreductase family CEW87_16465 PF00732 GMC oxidoreductase CEW87_16465 PF05199 GMC oxidoreductase CEW87_16470 PF00990 Diguanylate cyclase, GGDEF domain CEW87_16470 PF03707 Bacterial signalling protein N terminal repeat CEW87_16470 PF00563 EAL domain CEW87_16475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW87_16475 PF08447 PAS fold CEW87_16485 PF14525 AraC-binding-like domain CEW87_16485 PF12833 Helix-turn-helix domain CEW87_16495 PF00005 ABC transporter CEW87_16500 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW87_16500 PF00005 ABC transporter CEW87_16505 PF11862 Domain of unknown function (DUF3382) CEW87_16505 PF02653 Branched-chain amino acid transport system / permease component CEW87_16510 PF02653 Branched-chain amino acid transport system / permease component CEW87_16520 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CEW87_16520 PF00355 Rieske [2Fe-2S] domain CEW87_16525 PF00866 Ring hydroxylating beta subunit CEW87_16540 PF01613 Flavin reductase like domain CEW87_16560 PF12833 Helix-turn-helix domain CEW87_16570 PF01494 FAD binding domain CEW87_16575 PF00106 short chain dehydrogenase CEW87_16580 PF00378 Enoyl-CoA hydratase/isomerase CEW87_16585 PF02770 Acyl-CoA dehydrogenase, middle domain CEW87_16585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW87_16585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW87_16590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW87_16590 PF02770 Acyl-CoA dehydrogenase, middle domain CEW87_16590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW87_16605 PF00378 Enoyl-CoA hydratase/isomerase CEW87_16610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW87_16610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW87_16610 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CEW87_16615 PF02803 Thiolase, C-terminal domain CEW87_16615 PF00108 Thiolase, N-terminal domain CEW87_16620 PF00571 CBS domain CEW87_16620 PF00478 IMP dehydrogenase / GMP reductase domain CEW87_16635 PF03707 Bacterial signalling protein N terminal repeat CEW87_16635 PF00563 EAL domain CEW87_16635 PF00990 Diguanylate cyclase, GGDEF domain CEW87_16640 PF14437 MafB19-like deaminase CEW87_16645 PF17969 L,D-transpeptidase C-terminal domain CEW87_16645 PF03734 L,D-transpeptidase catalytic domain CEW87_16650 PF13673 Acetyltransferase (GNAT) domain CEW87_16665 PF01571 Aminomethyltransferase folate-binding domain CEW87_16670 PF02618 YceG-like family CEW87_16675 PF02223 Thymidylate kinase CEW87_16680 PF09115 DNA polymerase III, delta subunit, C terminal CEW87_16690 PF01026 TatD related DNase CEW87_16700 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CEW87_16700 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CEW87_16710 PF00850 Histone deacetylase domain CEW87_16715 PF08379 Bacterial transglutaminase-like N-terminal region CEW87_16715 PF01841 Transglutaminase-like superfamily CEW87_16720 PF04168 A predicted alpha-helical domain with a conserved ER motif. CEW87_16720 PF14403 Circularly permuted ATP-grasp type 2 CEW87_16730 PF07687 Peptidase dimerisation domain CEW87_16730 PF01546 Peptidase family M20/M25/M40 CEW87_16745 PF04055 Radical SAM superfamily CEW87_16745 PF06463 Molybdenum Cofactor Synthesis C CEW87_16755 PF13654 AAA domain CEW87_16755 PF05362 Lon protease (S16) C-terminal proteolytic domain CEW87_16770 PF03466 LysR substrate binding domain CEW87_16770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_16775 PF07690 Major Facilitator Superfamily CEW87_16790 PF00155 Aminotransferase class I and II CEW87_16795 PF04851 Type III restriction enzyme, res subunit CEW87_16795 PF02151 UvrB/uvrC motif CEW87_16795 PF12344 Ultra-violet resistance protein B CEW87_16795 PF17757 UvrB interaction domain CEW87_16795 PF00271 Helicase conserved C-terminal domain CEW87_16800 PF01451 Low molecular weight phosphotyrosine protein phosphatase CEW87_16805 PF10150 Ribonuclease E/G family CEW87_16805 PF00575 S1 RNA binding domain CEW87_16805 PF12111 Polyribonucleotide phosphorylase C terminal CEW87_16815 PF00849 RNA pseudouridylate synthase CEW87_16815 PF01479 S4 domain CEW87_16820 PF13419 Haloacid dehalogenase-like hydrolase CEW87_16830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW87_16835 PF02545 Maf-like protein CEW87_16840 PF02620 Large ribosomal RNA subunit accumulation protein YceD CEW87_16845 PF01783 Ribosomal L32p protein family CEW87_16850 PF02504 Fatty acid synthesis protein CEW87_16855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CEW87_16855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CEW87_16860 PF00698 Acyl transferase domain CEW87_16870 PF00550 Phosphopantetheine attachment site CEW87_16875 PF02801 Beta-ketoacyl synthase, C-terminal domain CEW87_16875 PF00109 Beta-ketoacyl synthase, N-terminal domain CEW87_16885 PF00890 FAD binding domain CEW87_16885 PF02910 Fumarate reductase flavoprotein C-term CEW87_16890 PF04542 Sigma-70 region 2 CEW87_16890 PF08281 Sigma-70, region 4 CEW87_16900 PF17188 MucB/RseB C-terminal domain CEW87_16900 PF03888 MucB/RseB N-terminal domain CEW87_16910 PF13180 PDZ domain CEW87_16920 PF03144 Elongation factor Tu domain 2 CEW87_16920 PF06421 GTP-binding protein LepA C-terminus CEW87_16920 PF00679 Elongation factor G C-terminus CEW87_16920 PF00009 Elongation factor Tu GTP binding domain CEW87_16925 PF10502 Signal peptidase, peptidase S26 CEW87_16935 PF00035 Double-stranded RNA binding motif CEW87_16935 PF14622 Ribonuclease-III-like CEW87_16940 PF01926 50S ribosome-binding GTPase CEW87_16940 PF07650 KH domain CEW87_16945 PF02565 Recombination protein O C terminal CEW87_16945 PF11967 Recombination protein O N terminal CEW87_16950 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CEW87_16955 PF01648 4'-phosphopantetheinyl transferase superfamily CEW87_16960 PF00933 Glycosyl hydrolase family 3 N terminal domain CEW87_16965 PF01541 GIY-YIG catalytic domain CEW87_16965 PF02151 UvrB/uvrC motif CEW87_16965 PF08459 UvrC Helix-hairpin-helix N-terminal CEW87_16970 PF01066 CDP-alcohol phosphatidyltransferase CEW87_17000 PF00226 DnaJ domain CEW87_17000 PF01556 DnaJ C terminal domain CEW87_17010 PF03776 Septum formation topological specificity factor MinE CEW87_17015 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEW87_17020 PF03775 Septum formation inhibitor MinC, C-terminal domain CEW87_17020 PF05209 Septum formation inhibitor MinC, N-terminal domain CEW87_17025 PF01430 Hsp33 protein CEW87_17030 PF03960 ArsC family CEW87_17035 PF17674 HHH domain CEW87_17035 PF00575 S1 RNA binding domain CEW87_17035 PF09371 Tex-like protein N-terminal domain CEW87_17035 PF16921 Tex protein YqgF-like domain CEW87_17045 PF13607 Succinyl-CoA ligase like flavodoxin domain CEW87_17045 PF13380 CoA binding domain CEW87_17045 PF00583 Acetyltransferase (GNAT) family CEW87_17050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_17050 PF00512 His Kinase A (phospho-acceptor) domain CEW87_17050 PF00989 PAS fold CEW87_17060 PF00581 Rhodanese-like domain CEW87_17065 PF02769 AIR synthase related protein, C-terminal domain CEW87_17065 PF00586 AIR synthase related protein, N-terminal domain CEW87_17070 PF13472 GDSL-like Lipase/Acylhydrolase family CEW87_17075 PF00005 ABC transporter CEW87_17080 PF01593 Flavin containing amine oxidoreductase CEW87_17095 PF00005 ABC transporter CEW87_17110 PF00563 EAL domain CEW87_17110 PF00990 Diguanylate cyclase, GGDEF domain CEW87_17110 PF08448 PAS fold CEW87_17125 PF01037 Lrp/AsnC ligand binding domain CEW87_17130 PF01266 FAD dependent oxidoreductase CEW87_17135 PF00849 RNA pseudouridylate synthase CEW87_17140 PF18073 Rubredoxin metal binding domain CEW87_17145 PF03466 LysR substrate binding domain CEW87_17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_17150 PF07690 Major Facilitator Superfamily CEW87_17155 PF03167 Uracil DNA glycosylase superfamily CEW87_17165 PF00814 Glycoprotease family CEW87_17175 PF00486 Transcriptional regulatory protein, C terminal CEW87_17175 PF00072 Response regulator receiver domain CEW87_17180 PF00672 HAMP domain CEW87_17180 PF00512 His Kinase A (phospho-acceptor) domain CEW87_17180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_17185 PF16123 Hydroxyacylglutathione hydrolase C-terminus CEW87_17185 PF00753 Metallo-beta-lactamase superfamily CEW87_17195 PF04279 Intracellular septation protein A CEW87_17200 PF03795 YCII-related domain CEW87_17205 PF01722 BolA-like protein CEW87_17215 PF12806 Acetyl-CoA dehydrogenase C-terminal like CEW87_17215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW87_17215 PF02770 Acyl-CoA dehydrogenase, middle domain CEW87_17215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW87_17225 PF01012 Electron transfer flavoprotein domain CEW87_17225 PF00766 Electron transfer flavoprotein FAD-binding domain CEW87_17230 PF01012 Electron transfer flavoprotein domain CEW87_17235 PF08359 YsiA-like protein, C-terminal region CEW87_17235 PF00440 Bacterial regulatory proteins, tetR family CEW87_17240 PF01026 TatD related DNase CEW87_17245 PF00378 Enoyl-CoA hydratase/isomerase CEW87_17250 PF13193 AMP-binding enzyme C-terminal domain CEW87_17250 PF00501 AMP-binding enzyme CEW87_17265 PF00005 ABC transporter CEW87_17270 PF02405 Permease MlaE CEW87_17275 PF02541 Ppx/GppA phosphatase family CEW87_17280 PF02503 Polyphosphate kinase middle domain CEW87_17280 PF13090 Polyphosphate kinase C-terminal domain 2 CEW87_17280 PF17941 Polyphosphate kinase C-terminal domain 1 CEW87_17280 PF13089 Polyphosphate kinase N-terminal domain CEW87_17285 PF13291 ACT domain CEW87_17285 PF04607 Region found in RelA / SpoT proteins CEW87_17285 PF02824 TGS domain CEW87_17295 PF00892 EamA-like transporter family CEW87_17320 PF02542 YgbB family CEW87_17325 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CEW87_17335 PF01875 Memo-like protein CEW87_17340 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CEW87_17340 PF01871 AMMECR1 CEW87_17360 PF00270 DEAD/DEAH box helicase CEW87_17360 PF02559 CarD-like/TRCF domain CEW87_17360 PF00271 Helicase conserved C-terminal domain CEW87_17360 PF03461 TRCF domain CEW87_17360 PF17757 UvrB interaction domain CEW87_17365 PF13493 Domain of unknown function (DUF4118) CEW87_17365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_17365 PF00512 His Kinase A (phospho-acceptor) domain CEW87_17365 PF13492 GAF domain CEW87_17365 PF02702 Osmosensitive K+ channel His kinase sensor domain CEW87_17370 PF00072 Response regulator receiver domain CEW87_17370 PF00486 Transcriptional regulatory protein, C terminal CEW87_17375 PF08479 POTRA domain, ShlB-type CEW87_17375 PF17287 POTRA domain CEW87_17375 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CEW87_17380 PF14436 Bacterial EndoU nuclease CEW87_17380 PF05594 Haemagluttinin repeat CEW87_17380 PF04829 Pre-toxin domain with VENN motif CEW87_17380 PF05860 haemagglutination activity domain CEW87_17380 PF13332 Hemagglutinin repeat CEW87_17385 PF01544 CorA-like Mg2+ transporter protein CEW87_17395 PF00793 DAHP synthetase I family CEW87_17405 PF18027 Cytosolic carboxypeptidase N-terminal domain CEW87_17405 PF00246 Zinc carboxypeptidase CEW87_17410 PF03883 Peroxide stress protein YaaA CEW87_17415 PF00588 SpoU rRNA Methylase family CEW87_17415 PF08032 RNA 2'-O ribose methyltransferase substrate binding CEW87_17425 PF01351 Ribonuclease HII CEW87_17430 PF02684 Lipid-A-disaccharide synthetase CEW87_17435 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CEW87_17435 PF00132 Bacterial transferase hexapeptide (six repeats) CEW87_17440 PF07977 FabA-like domain CEW87_17445 PF14602 Hexapeptide repeat of succinyl-transferase CEW87_17445 PF00132 Bacterial transferase hexapeptide (six repeats) CEW87_17445 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CEW87_17455 PF01103 Surface antigen CEW87_17455 PF07244 Surface antigen variable number repeat CEW87_17460 PF13180 PDZ domain CEW87_17460 PF17820 PDZ domain CEW87_17460 PF02163 Peptidase family M50 CEW87_17465 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CEW87_17465 PF13288 DXP reductoisomerase C-terminal domain CEW87_17465 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CEW87_17475 PF01255 Putative undecaprenyl diphosphate synthase CEW87_17480 PF01765 Ribosome recycling factor CEW87_17485 PF00696 Amino acid kinase family CEW87_17490 PF00889 Elongation factor TS CEW87_17495 PF00318 Ribosomal protein S2 CEW87_17500 PF00557 Metallopeptidase family M24 CEW87_17505 PF01966 HD domain CEW87_17505 PF08335 GlnD PII-uridylyltransferase CEW87_17510 PF03350 Uncharacterized protein family, UPF0114 CEW87_17515 PF01048 Phosphorylase superfamily CEW87_17525 PF00483 Nucleotidyl transferase CEW87_17530 PF00533 BRCA1 C Terminus (BRCT) domain CEW87_17530 PF01653 NAD-dependent DNA ligase adenylation domain CEW87_17530 PF03120 NAD-dependent DNA ligase OB-fold domain CEW87_17530 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CEW87_17530 PF12826 Helix-hairpin-helix motif CEW87_17540 PF02463 RecF/RecN/SMC N terminal domain CEW87_17545 PF00155 Aminotransferase class I and II CEW87_17550 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CEW87_17550 PF14602 Hexapeptide repeat of succinyl-transferase CEW87_17550 PF00132 Bacterial transferase hexapeptide (six repeats) CEW87_17555 PF00437 Type II/IV secretion system protein CEW87_17560 PF07687 Peptidase dimerisation domain CEW87_17560 PF01546 Peptidase family M20/M25/M40 CEW87_17565 PF05175 Methyltransferase small domain CEW87_17570 PF00072 Response regulator receiver domain CEW87_17575 PF04384 Iron-sulphur cluster assembly CEW87_17580 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_17585 PF00012 Hsp70 protein CEW87_17590 PF07743 HSCB C-terminal oligomerisation domain CEW87_17595 PF01521 Iron-sulphur cluster biosynthesis CEW87_17600 PF01592 NifU-like N terminal domain CEW87_17605 PF00266 Aminotransferase class-V CEW87_17610 PF00266 Aminotransferase class-V CEW87_17615 PF02082 Transcriptional regulator CEW87_17620 PF00132 Bacterial transferase hexapeptide (six repeats) CEW87_17625 PF00588 SpoU rRNA Methylase family CEW87_17630 PF00459 Inositol monophosphatase family CEW87_17635 PF00004 ATPase family associated with various cellular activities (AAA) CEW87_17635 PF07724 AAA domain (Cdc48 subfamily) CEW87_17635 PF10431 C-terminal, D2-small domain, of ClpB protein CEW87_17635 PF17871 AAA lid domain CEW87_17700 PF00106 short chain dehydrogenase CEW87_17705 PF12833 Helix-turn-helix domain CEW87_17705 PF06719 AraC-type transcriptional regulator N-terminus CEW87_17745 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CEW87_17750 PF00117 Glutamine amidotransferase class-I CEW87_17750 PF00958 GMP synthase C terminal domain CEW87_17750 PF02540 NAD synthase CEW87_17755 PF00571 CBS domain CEW87_17755 PF00478 IMP dehydrogenase / GMP reductase domain CEW87_17765 PF03658 RnfH family Ubiquitin CEW87_17775 PF01668 SmpB protein CEW87_17780 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CEW87_17785 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_17785 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW87_17790 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_17795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW87_17800 PF01062 Bestrophin, RFP-TM, chloride channel CEW87_17810 PF05698 Bacterial trigger factor protein (TF) C-terminus CEW87_17815 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEW87_17815 PF01571 Aminomethyltransferase folate-binding domain CEW87_17820 PF01597 Glycine cleavage H-protein CEW87_17825 PF02347 Glycine cleavage system P-protein CEW87_17840 PF07238 PilZ domain CEW87_17840 PF03552 Cellulose synthase CEW87_17840 PF00535 Glycosyl transferase family 2 CEW87_17850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_17850 PF03466 LysR substrate binding domain CEW87_17855 PF00175 Oxidoreductase NAD-binding domain CEW87_17855 PF00970 Oxidoreductase FAD-binding domain CEW87_17860 PF03150 Di-haem cytochrome c peroxidase CEW87_17860 PF00034 Cytochrome c CEW87_17860 PF14376 Haem-binding domain CEW87_17865 PF00563 EAL domain CEW87_17865 PF00990 Diguanylate cyclase, GGDEF domain CEW87_17865 PF03707 Bacterial signalling protein N terminal repeat CEW87_17870 PF00255 Glutathione peroxidase CEW87_17880 PF12848 ABC transporter CEW87_17880 PF00005 ABC transporter CEW87_17885 PF01370 NAD dependent epimerase/dehydratase family CEW87_17885 PF02222 ATP-grasp domain CEW87_17900 PF04324 BFD-like [2Fe-2S] binding domain CEW87_17900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEW87_17900 PF00384 Molybdopterin oxidoreductase CEW87_17900 PF01568 Molydopterin dinucleotide binding domain CEW87_17935 PF03772 Competence protein CEW87_17935 PF00753 Metallo-beta-lactamase superfamily CEW87_17945 PF00005 ABC transporter CEW87_17950 PF12704 MacB-like periplasmic core domain CEW87_17950 PF02687 FtsX-like permease family CEW87_17955 PF08497 Radical SAM N-terminal CEW87_17955 PF11842 Domain of unknown function (DUF3362) CEW87_17955 PF04055 Radical SAM superfamily CEW87_17970 PF01368 DHH family CEW87_17970 PF02272 DHHA1 domain CEW87_17970 PF17768 RecJ OB domain CEW87_17975 PF01230 HIT domain CEW87_18000 PF06470 SMC proteins Flexible Hinge Domain CEW87_18000 PF02463 RecF/RecN/SMC N terminal domain CEW87_18020 PF07690 Major Facilitator Superfamily CEW87_18025 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_18055 PF01494 FAD binding domain CEW87_18060 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_18065 PF13193 AMP-binding enzyme C-terminal domain CEW87_18065 PF00501 AMP-binding enzyme CEW87_18070 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CEW87_18070 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CEW87_18075 PF00072 Response regulator receiver domain CEW87_18075 PF00196 Bacterial regulatory proteins, luxR family CEW87_18090 PF03466 LysR substrate binding domain CEW87_18090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_18095 PF00491 Arginase family CEW87_18100 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW87_18105 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_18115 PF00005 ABC transporter CEW87_18140 PF01556 DnaJ C terminal domain CEW87_18140 PF00226 DnaJ domain CEW87_18145 PF01810 LysE type translocator CEW87_18165 PF00501 AMP-binding enzyme CEW87_18165 PF14535 AMP-binding enzyme C-terminal domain CEW87_18170 PF02514 CobN/Magnesium Chelatase CEW87_18185 PF01339 CheB methylesterase CEW87_18185 PF08448 PAS fold CEW87_18185 PF03705 CheR methyltransferase, all-alpha domain CEW87_18185 PF01739 CheR methyltransferase, SAM binding domain CEW87_18190 PF00563 EAL domain CEW87_18190 PF03707 Bacterial signalling protein N terminal repeat CEW87_18190 PF00990 Diguanylate cyclase, GGDEF domain CEW87_18210 PF00893 Small Multidrug Resistance protein CEW87_18215 PF03625 Domain of unknown function DUF302 CEW87_18215 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CEW87_18235 PF01177 Asp/Glu/Hydantoin racemase CEW87_18245 PF01037 Lrp/AsnC ligand binding domain CEW87_18265 PF08362 YcdC-like protein, C-terminal region CEW87_18265 PF00440 Bacterial regulatory proteins, tetR family CEW87_18270 PF02608 ABC transporter substrate-binding protein PnrA-like CEW87_18290 PF07969 Amidohydrolase family CEW87_18295 PF00155 Aminotransferase class I and II CEW87_18340 PF01336 OB-fold nucleic acid binding domain CEW87_18340 PF00152 tRNA synthetases class II (D, K and N) CEW87_18395 PF02580 D-Tyr-tRNA(Tyr) deacylase CEW87_18400 PF13416 Bacterial extracellular solute-binding protein CEW87_18405 PF08402 TOBE domain CEW87_18405 PF00005 ABC transporter CEW87_18410 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_18415 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_18420 PF01235 Sodium:alanine symporter family CEW87_18430 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CEW87_18430 PF01266 FAD dependent oxidoreductase CEW87_18445 PF08447 PAS fold CEW87_18445 PF05231 MASE1 CEW87_18445 PF00563 EAL domain CEW87_18445 PF08448 PAS fold CEW87_18445 PF13426 PAS domain CEW87_18445 PF00990 Diguanylate cyclase, GGDEF domain CEW87_18450 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEW87_18465 PF00990 Diguanylate cyclase, GGDEF domain CEW87_18470 PF00291 Pyridoxal-phosphate dependent enzyme CEW87_18470 PF14821 Threonine synthase N terminus CEW87_18475 PF04715 Anthranilate synthase component I, N terminal region CEW87_18475 PF00425 chorismate binding enzyme CEW87_18485 PF13614 AAA domain CEW87_18490 PF01053 Cys/Met metabolism PLP-dependent enzyme CEW87_18505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEW87_18505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW87_18510 PF02811 PHP domain CEW87_18510 PF07733 Bacterial DNA polymerase III alpha NTPase domain CEW87_18510 PF14579 Helix-hairpin-helix motif CEW87_18510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CEW87_18515 PF01266 FAD dependent oxidoreductase CEW87_18520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_18520 PF03466 LysR substrate binding domain CEW87_18525 PF08240 Alcohol dehydrogenase GroES-like domain CEW87_18525 PF00107 Zinc-binding dehydrogenase CEW87_18545 PF03447 Homoserine dehydrogenase, NAD binding domain CEW87_18545 PF01842 ACT domain CEW87_18545 PF00742 Homoserine dehydrogenase CEW87_18550 PF00155 Aminotransferase class I and II CEW87_18560 PF00578 AhpC/TSA family CEW87_18565 PF02562 PhoH-like protein CEW87_18565 PF13638 PIN domain CEW87_18570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW87_18570 PF08447 PAS fold CEW87_18585 PF00877 NlpC/P60 family CEW87_18595 PF13416 Bacterial extracellular solute-binding protein CEW87_18600 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_18605 PF00005 ABC transporter CEW87_18605 PF08402 TOBE domain CEW87_18610 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CEW87_18615 PF04377 Arginine-tRNA-protein transferase, C terminus CEW87_18615 PF04376 Arginine-tRNA-protein transferase, N terminus CEW87_18620 PF01180 Dihydroorotate dehydrogenase CEW87_18625 PF02508 Rnf-Nqr subunit, membrane protein CEW87_18630 PF04060 Putative Fe-S cluster CEW87_18635 PF13237 4Fe-4S dicluster domain CEW87_18635 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEW87_18635 PF13375 RnfC Barrel sandwich hybrid domain CEW87_18635 PF10531 SLBB domain CEW87_18640 PF03116 NQR2, RnfD, RnfE family CEW87_18645 PF04205 FMN-binding domain CEW87_18650 PF02508 Rnf-Nqr subunit, membrane protein CEW87_18655 PF00730 HhH-GPD superfamily base excision DNA repair protein CEW87_18655 PF00633 Helix-hairpin-helix motif CEW87_18655 PF10576 Iron-sulfur binding domain of endonuclease III CEW87_18665 PF00034 Cytochrome c CEW87_18670 PF00034 Cytochrome c CEW87_18675 PF00004 ATPase family associated with various cellular activities (AAA) CEW87_18675 PF01434 Peptidase family M41 CEW87_18675 PF17862 AAA+ lid domain CEW87_18690 PF01613 Flavin reductase like domain CEW87_18690 PF00258 Flavodoxin CEW87_18695 PF01047 MarR family CEW87_18700 PF00654 Voltage gated chloride channel CEW87_18710 PF00990 Diguanylate cyclase, GGDEF domain CEW87_18710 PF00563 EAL domain CEW87_18710 PF03707 Bacterial signalling protein N terminal repeat CEW87_18725 PF02653 Branched-chain amino acid transport system / permease component CEW87_18735 PF00005 ABC transporter CEW87_18740 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW87_18740 PF00005 ABC transporter CEW87_18745 PF00183 Hsp90 protein CEW87_18745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_18750 PF03449 Transcription elongation factor, N-terminal CEW87_18750 PF01272 Transcription elongation factor, GreA/GreB, C-term CEW87_18760 PF00924 Mechanosensitive ion channel CEW87_18760 PF12795 Mechanosensitive ion channel porin domain CEW87_18760 PF12794 Mechanosensitive ion channel inner membrane domain 1 CEW87_18770 PF01053 Cys/Met metabolism PLP-dependent enzyme CEW87_18775 PF12697 Alpha/beta hydrolase family CEW87_18790 PF01545 Cation efflux family CEW87_18800 PF03594 Benzoate membrane transport protein CEW87_18810 PF00374 Nickel-dependent hydrogenase CEW87_18815 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CEW87_18820 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CEW87_18825 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEW87_18825 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CEW87_18830 PF03477 ATP cone domain CEW87_18830 PF00317 Ribonucleotide reductase, all-alpha domain CEW87_18830 PF02867 Ribonucleotide reductase, barrel domain CEW87_18840 PF01627 Hpt domain CEW87_18840 PF00512 His Kinase A (phospho-acceptor) domain CEW87_18840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEW87_18840 PF00072 Response regulator receiver domain CEW87_18840 PF00672 HAMP domain CEW87_18840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_18850 PF00535 Glycosyl transferase family 2 CEW87_18860 PF00501 AMP-binding enzyme CEW87_18860 PF13193 AMP-binding enzyme C-terminal domain CEW87_18865 PF03061 Thioesterase superfamily CEW87_18885 PF07715 TonB-dependent Receptor Plug Domain CEW87_18885 PF00593 TonB dependent receptor CEW87_18895 PF12801 4Fe-4S binding domain CEW87_18895 PF04205 FMN-binding domain CEW87_18905 PF07715 TonB-dependent Receptor Plug Domain CEW87_18905 PF00593 TonB dependent receptor CEW87_18920 PF02630 SCO1/SenC CEW87_18930 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CEW87_18930 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CEW87_18930 PF02769 AIR synthase related protein, C-terminal domain CEW87_18935 PF01569 PAP2 superfamily CEW87_18945 PF00535 Glycosyl transferase family 2 CEW87_18950 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CEW87_18955 PF01569 PAP2 superfamily CEW87_18965 PF10145 Phage-related minor tail protein CEW87_18965 PF01464 Transglycosylase SLT domain CEW87_18965 PF01551 Peptidase family M23 CEW87_18970 PF02896 PEP-utilising enzyme, TIM barrel domain CEW87_18970 PF00391 PEP-utilising enzyme, mobile domain CEW87_18970 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CEW87_18975 PF03618 Kinase/pyrophosphorylase CEW87_18985 PF01641 SelR domain CEW87_18990 PF12697 Alpha/beta hydrolase family CEW87_18995 PF07995 Glucose / Sorbosone dehydrogenase CEW87_19005 PF14497 Glutathione S-transferase, C-terminal domain CEW87_19005 PF02798 Glutathione S-transferase, N-terminal domain CEW87_19020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEW87_19030 PF01494 FAD binding domain CEW87_19045 PF01867 CRISPR associated protein Cas1 CEW87_19050 PF18019 HD domain CEW87_19065 PF09611 CRISPR-associated protein (Cas_Csy1) CEW87_19070 PF09614 CRISPR-associated protein (Cas_Csy2) CEW87_19075 PF09615 CRISPR-associated protein (Cas_Csy3) CEW87_19080 PF09618 CRISPR-associated protein (Cas_Csy4) CEW87_19095 PF18113 Rubredoxin binding C-terminal domain CEW87_19095 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_19110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_19115 PF02028 BCCT, betaine/carnitine/choline family transporter CEW87_19120 PF00557 Metallopeptidase family M24 CEW87_19130 PF00474 Sodium:solute symporter family CEW87_19135 PF00929 Exonuclease CEW87_19140 PF00072 Response regulator receiver domain CEW87_19140 PF00486 Transcriptional regulatory protein, C terminal CEW87_19145 PF18698 Histidine kinase sensor domain CEW87_19145 PF00672 HAMP domain CEW87_19145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_19145 PF00512 His Kinase A (phospho-acceptor) domain CEW87_19145 PF00989 PAS fold CEW87_19155 PF13193 AMP-binding enzyme C-terminal domain CEW87_19155 PF00501 AMP-binding enzyme CEW87_19155 PF16177 Acetyl-coenzyme A synthetase N-terminus CEW87_19170 PF00034 Cytochrome c CEW87_19175 PF00115 Cytochrome C and Quinol oxidase polypeptide I CEW87_19185 PF07690 Major Facilitator Superfamily CEW87_19190 PF00510 Cytochrome c oxidase subunit III CEW87_19200 PF08406 CbbQ/NirQ/NorQ C-terminal CEW87_19200 PF07728 AAA domain (dynein-related subfamily) CEW87_19225 PF07690 Major Facilitator Superfamily CEW87_19235 PF04055 Radical SAM superfamily CEW87_19235 PF13186 Iron-sulfur cluster-binding domain CEW87_19240 PF01226 Formate/nitrite transporter CEW87_19245 PF00069 Protein kinase domain CEW87_19250 PF01810 LysE type translocator CEW87_19255 PF03466 LysR substrate binding domain CEW87_19255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_19260 PF00892 EamA-like transporter family CEW87_19265 PF00892 EamA-like transporter family CEW87_19290 PF17805 AsnC-like ligand binding domain CEW87_19295 PF17805 AsnC-like ligand binding domain CEW87_19295 PF13404 AsnC-type helix-turn-helix domain CEW87_19310 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEW87_19315 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEW87_19320 PF14824 Sirohaem biosynthesis protein central CEW87_19320 PF10414 Sirohaem synthase dimerisation region CEW87_19320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW87_19325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEW87_19325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEW87_19330 PF01209 ubiE/COQ5 methyltransferase family CEW87_19335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW87_19335 PF17200 Single Cache domain 2 CEW87_19335 PF00672 HAMP domain CEW87_19355 PF01258 Prokaryotic dksA/traR C4-type zinc finger CEW87_19360 PF01138 3' exoribonuclease family, domain 1 CEW87_19360 PF00013 KH domain CEW87_19360 PF03725 3' exoribonuclease family, domain 2 CEW87_19360 PF00575 S1 RNA binding domain CEW87_19360 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CEW87_19365 PF00312 Ribosomal protein S15 CEW87_19370 PF16198 tRNA pseudouridylate synthase B C-terminal domain CEW87_19370 PF09157 Pseudouridine synthase II TruB, C-terminal CEW87_19370 PF01509 TruB family pseudouridylate synthase (N terminal domain) CEW87_19375 PF02033 Ribosome-binding factor A CEW87_19380 PF11987 Translation-initiation factor 2 CEW87_19380 PF08364 Bacterial translation initiation factor IF-2 associated region CEW87_19380 PF04760 Translation initiation factor IF-2, N-terminal region CEW87_19380 PF00009 Elongation factor Tu GTP binding domain CEW87_19385 PF08529 NusA N-terminal domain CEW87_19385 PF13184 NusA-like KH domain CEW87_19390 PF17384 RimP C-terminal SH3 domain CEW87_19390 PF02576 RimP N-terminal domain CEW87_19395 PF00849 RNA pseudouridylate synthase CEW87_19395 PF01479 S4 domain CEW87_19400 PF04079 Segregation and condensation complex subunit ScpB CEW87_19405 PF02616 Segregation and condensation protein ScpA CEW87_19410 PF00579 tRNA synthetases class I (W and Y) CEW87_19415 PF02163 Peptidase family M50 CEW87_19420 PF01300 Telomere recombination CEW87_19425 PF02811 PHP domain CEW87_19430 PF00561 alpha/beta hydrolase fold CEW87_19435 PF00563 EAL domain CEW87_19435 PF03707 Bacterial signalling protein N terminal repeat CEW87_19435 PF00990 Diguanylate cyclase, GGDEF domain CEW87_19440 PF07724 AAA domain (Cdc48 subfamily) CEW87_19440 PF17871 AAA lid domain CEW87_19440 PF02861 Clp amino terminal domain, pathogenicity island component CEW87_19440 PF10431 C-terminal, D2-small domain, of ClpB protein CEW87_19440 PF00004 ATPase family associated with various cellular activities (AAA) CEW87_19445 PF00005 ABC transporter CEW87_19445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW87_19450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEW87_19455 PF00578 AhpC/TSA family CEW87_19460 PF01726 LexA DNA binding domain CEW87_19460 PF00717 Peptidase S24-like CEW87_19475 PF01329 Pterin 4 alpha carbinolamine dehydratase CEW87_19520 PF01136 Peptidase family U32 CEW87_19520 PF12392 Collagenase CEW87_19535 PF02579 Dinitrogenase iron-molybdenum cofactor CEW87_19535 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal CEW87_19550 PF01926 50S ribosome-binding GTPase CEW87_19555 PF00313 'Cold-shock' DNA-binding domain CEW87_19560 PF00271 Helicase conserved C-terminal domain CEW87_19560 PF03880 DbpA RNA binding domain CEW87_19560 PF00270 DEAD/DEAH box helicase CEW87_19565 PF01636 Phosphotransferase enzyme family CEW87_19585 PF07152 YaeQ protein CEW87_19610 PF01227 GTP cyclohydrolase I CEW87_19620 PF01384 Phosphate transporter family CEW87_19630 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CEW87_19640 PF00860 Permease family CEW87_19645 PF01510 N-acetylmuramoyl-L-alanine amidase CEW87_19645 PF01471 Putative peptidoglycan binding domain CEW87_19655 PF00593 TonB dependent receptor CEW87_19655 PF07715 TonB-dependent Receptor Plug Domain CEW87_19660 PF07715 TonB-dependent Receptor Plug Domain CEW87_19660 PF00593 TonB dependent receptor CEW87_19665 PF02954 Bacterial regulatory protein, Fis family CEW87_19665 PF00158 Sigma-54 interaction domain CEW87_19665 PF00072 Response regulator receiver domain CEW87_19670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_19670 PF02743 Cache domain CEW87_19670 PF00512 His Kinase A (phospho-acceptor) domain CEW87_19685 PF16868 NMT1-like family CEW87_19690 PF01266 FAD dependent oxidoreductase CEW87_19715 PF09997 Predicted membrane protein (DUF2238) CEW87_19720 PF13746 4Fe-4S dicluster domain CEW87_19720 PF12801 4Fe-4S binding domain CEW87_19720 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CEW87_19725 PF02082 Transcriptional regulator CEW87_19730 PF00571 CBS domain CEW87_19730 PF00478 IMP dehydrogenase / GMP reductase domain CEW87_19735 PF05661 Protein of unknown function (DUF808) CEW87_19740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_19740 PF03466 LysR substrate binding domain CEW87_19745 PF07883 Cupin domain CEW87_19750 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEW87_19755 PF01494 FAD binding domain CEW87_19760 PF13417 Glutathione S-transferase, N-terminal domain CEW87_19765 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_19775 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_19785 PF01494 FAD binding domain CEW87_19795 PF05343 M42 glutamyl aminopeptidase CEW87_19805 PF13537 Glutamine amidotransferase domain CEW87_19805 PF00733 Asparagine synthase CEW87_19835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_19835 PF03466 LysR substrate binding domain CEW87_19840 PF02678 Pirin CEW87_19840 PF05726 Pirin C-terminal cupin domain CEW87_19845 PF04073 Aminoacyl-tRNA editing domain CEW87_19850 PF01212 Beta-eliminating lyase CEW87_19855 PF05698 Bacterial trigger factor protein (TF) C-terminus CEW87_19860 PF00708 Acylphosphatase CEW87_19865 PF00012 Hsp70 protein CEW87_19880 PF07687 Peptidase dimerisation domain CEW87_19880 PF01546 Peptidase family M20/M25/M40 CEW87_19895 PF04245 37-kD nucleoid-associated bacterial protein CEW87_19900 PF00970 Oxidoreductase FAD-binding domain CEW87_19900 PF00175 Oxidoreductase NAD-binding domain CEW87_19900 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_19915 PF09297 NADH pyrophosphatase zinc ribbon domain CEW87_19915 PF00293 NUDIX domain CEW87_19915 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CEW87_19920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEW87_19920 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEW87_19925 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CEW87_19925 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CEW87_19935 PF00119 ATP synthase A chain CEW87_19940 PF00137 ATP synthase subunit C CEW87_19945 PF00213 ATP synthase delta (OSCP) subunit CEW87_19945 PF00430 ATP synthase B/B' CF(0) CEW87_19950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEW87_19950 PF00306 ATP synthase alpha/beta chain, C terminal domain CEW87_19960 PF00664 ABC transporter transmembrane region CEW87_19960 PF00005 ABC transporter CEW87_19970 PF00999 Sodium/hydrogen exchanger family CEW87_19975 PF07690 Major Facilitator Superfamily CEW87_19985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEW87_19985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW87_19990 PF03006 Haemolysin-III related CEW87_20000 PF05958 tRNA (Uracil-5-)-methyltransferase CEW87_20005 PF00085 Thioredoxin CEW87_20010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW87_20010 PF02770 Acyl-CoA dehydrogenase, middle domain CEW87_20010 PF12806 Acetyl-CoA dehydrogenase C-terminal like CEW87_20010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW87_20020 PF00106 short chain dehydrogenase CEW87_20025 PF02803 Thiolase, C-terminal domain CEW87_20025 PF00108 Thiolase, N-terminal domain CEW87_20030 PF00378 Enoyl-CoA hydratase/isomerase CEW87_20035 PF13193 AMP-binding enzyme C-terminal domain CEW87_20035 PF00501 AMP-binding enzyme CEW87_20045 PF00005 ABC transporter CEW87_20050 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW87_20050 PF00005 ABC transporter CEW87_20060 PF00440 Bacterial regulatory proteins, tetR family CEW87_20060 PF17932 Tetracyclin repressor-like, C-terminal domain CEW87_20065 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_20075 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_20080 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CEW87_20090 PF03466 LysR substrate binding domain CEW87_20090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_20100 PF00248 Aldo/keto reductase family CEW87_20105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEW87_20110 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CEW87_20115 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CEW87_20120 PF04909 Amidohydrolase CEW87_20125 PF03737 Aldolase/RraA CEW87_20130 PF04909 Amidohydrolase CEW87_20135 PF04303 PrpF protein CEW87_20140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_20140 PF03466 LysR substrate binding domain CEW87_20150 PF00925 GTP cyclohydrolase II CEW87_20165 PF03707 Bacterial signalling protein N terminal repeat CEW87_20165 PF00990 Diguanylate cyclase, GGDEF domain CEW87_20165 PF00563 EAL domain CEW87_20175 PF08448 PAS fold CEW87_20175 PF00990 Diguanylate cyclase, GGDEF domain CEW87_20210 PF00216 Bacterial DNA-binding protein CEW87_20215 PF05362 Lon protease (S16) C-terminal proteolytic domain CEW87_20215 PF00004 ATPase family associated with various cellular activities (AAA) CEW87_20215 PF02190 ATP-dependent protease La (LON) substrate-binding domain CEW87_20220 PF06689 ClpX C4-type zinc finger CEW87_20220 PF10431 C-terminal, D2-small domain, of ClpB protein CEW87_20220 PF07724 AAA domain (Cdc48 subfamily) CEW87_20225 PF00574 Clp protease CEW87_20230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEW87_20230 PF05698 Bacterial trigger factor protein (TF) C-terminus CEW87_20230 PF05697 Bacterial trigger factor protein (TF) CEW87_20235 PF08298 PrkA AAA domain CEW87_20235 PF06798 PrkA serine protein kinase C-terminal domain CEW87_20240 PF04285 Protein of unknown function (DUF444) CEW87_20245 PF04293 SpoVR like protein CEW87_20250 PF01256 Carbohydrate kinase CEW87_20250 PF03853 YjeF-related protein N-terminus CEW87_20260 PF00892 EamA-like transporter family CEW87_20265 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CEW87_20265 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CEW87_20270 PF04542 Sigma-70 region 2 CEW87_20270 PF08281 Sigma-70, region 4 CEW87_20280 PF13167 GTP-binding GTPase N-terminal CEW87_20280 PF16360 GTP-binding GTPase Middle Region CEW87_20280 PF01926 50S ribosome-binding GTPase CEW87_20295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEW87_20295 PF01872 RibD C-terminal domain CEW87_20310 PF13439 Glycosyltransferase Family 4 CEW87_20320 PF08240 Alcohol dehydrogenase GroES-like domain CEW87_20320 PF00107 Zinc-binding dehydrogenase CEW87_20325 PF01066 CDP-alcohol phosphatidyltransferase CEW87_20335 PF01844 HNH endonuclease CEW87_20340 PF07311 Dodecin CEW87_20365 PF13533 Biotin-lipoyl like CEW87_20375 PF00005 ABC transporter CEW87_20385 PF04607 Region found in RelA / SpoT proteins CEW87_20385 PF02824 TGS domain CEW87_20385 PF13291 ACT domain CEW87_20395 PF03481 Putative GTP-binding controlling metal-binding CEW87_20395 PF01300 Telomere recombination CEW87_20400 PF02222 ATP-grasp domain CEW87_20400 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CEW87_20405 PF00731 AIR carboxylase CEW87_20410 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CEW87_20410 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CEW87_20415 PF03471 Transporter associated domain CEW87_20415 PF02080 TrkA-C domain CEW87_20415 PF00999 Sodium/hydrogen exchanger family CEW87_20420 PF00072 Response regulator receiver domain CEW87_20420 PF00196 Bacterial regulatory proteins, luxR family CEW87_20425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_20425 PF00512 His Kinase A (phospho-acceptor) domain CEW87_20425 PF00989 PAS fold CEW87_20435 PF00456 Transketolase, thiamine diphosphate binding domain CEW87_20435 PF17831 Pyruvate dehydrogenase E1 component middle domain CEW87_20440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEW87_20440 PF02817 e3 binding domain CEW87_20440 PF00364 Biotin-requiring enzyme CEW87_20445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEW87_20445 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_20475 PF08331 Domain of unknown function (DUF1730) CEW87_20480 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CEW87_20485 PF11741 AMIN domain CEW87_20485 PF01520 N-acetylmuramoyl-L-alanine amidase CEW87_20490 PF01687 Riboflavin kinase CEW87_20490 PF06574 FAD synthetase CEW87_20495 PF00133 tRNA synthetases class I (I, L, M and V) CEW87_20495 PF06827 Zinc finger found in FPG and IleRS CEW87_20495 PF08264 Anticodon-binding domain of tRNA CEW87_20500 PF01252 Signal peptidase (SPase) II CEW87_20505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEW87_20510 PF02401 LytB protein CEW87_20520 PF02609 Exonuclease VII small subunit CEW87_20525 PF00348 Polyprenyl synthetase CEW87_20530 PF02780 Transketolase, C-terminal domain CEW87_20530 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CEW87_20530 PF02779 Transketolase, pyrimidine binding domain CEW87_20535 PF02649 Type I GTP cyclohydrolase folE2 CEW87_20540 PF00296 Luciferase-like monooxygenase CEW87_20550 PF02780 Transketolase, C-terminal domain CEW87_20550 PF02779 Transketolase, pyrimidine binding domain CEW87_20555 PF00676 Dehydrogenase E1 component CEW87_20570 PF00330 Aconitase family (aconitate hydratase) CEW87_20570 PF06434 Aconitate hydratase 2 N-terminus CEW87_20570 PF11791 Aconitate B N-terminal domain CEW87_20575 PF00694 Aconitase C-terminal domain CEW87_20575 PF00330 Aconitase family (aconitate hydratase) CEW87_20605 PF03692 Putative zinc- or iron-chelating domain CEW87_20615 PF02390 Putative methyltransferase CEW87_20620 PF01207 Dihydrouridine synthase (Dus) CEW87_20625 PF01197 Ribosomal protein L31 CEW87_20635 PF00929 Exonuclease CEW87_20640 PF16491 CAAX prenyl protease N-terminal, five membrane helices CEW87_20640 PF01435 Peptidase family M48 CEW87_20650 PF03193 RsgA GTPase CEW87_20655 PF04168 A predicted alpha-helical domain with a conserved ER motif. CEW87_20655 PF14403 Circularly permuted ATP-grasp type 2 CEW87_20660 PF14403 Circularly permuted ATP-grasp type 2 CEW87_20665 PF02803 Thiolase, C-terminal domain CEW87_20665 PF00108 Thiolase, N-terminal domain CEW87_20675 PF00293 NUDIX domain CEW87_20690 PF00970 Oxidoreductase FAD-binding domain CEW87_20690 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_20690 PF00175 Oxidoreductase NAD-binding domain CEW87_20695 PF04461 Protein of unknown function (DUF520) CEW87_20700 PF06865 Pyrimidine/purine nucleoside phosphorylase CEW87_20710 PF00764 Arginosuccinate synthase CEW87_20715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEW87_20715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEW87_20720 PF00202 Aminotransferase class-III CEW87_20730 PF01649 Ribosomal protein S20 CEW87_20735 PF03023 Lipid II flippase MurJ CEW87_20740 PF01161 Phosphatidylethanolamine-binding protein CEW87_20750 PF00365 Phosphofructokinase CEW87_20755 PF05191 Adenylate kinase, active site lid CEW87_20760 PF02348 Cytidylyltransferase CEW87_20765 PF03966 Trm112p-like protein CEW87_20770 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CEW87_20780 PF01618 MotA/TolQ/ExbB proton channel family CEW87_20785 PF13742 OB-fold nucleic acid binding domain CEW87_20785 PF02601 Exonuclease VII, large subunit CEW87_20790 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CEW87_20790 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CEW87_20795 PF00849 RNA pseudouridylate synthase CEW87_20800 PF00923 Transaldolase/Fructose-6-phosphate aldolase CEW87_20805 PF01627 Hpt domain CEW87_20805 PF07194 P2 response regulator binding domain CEW87_20805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_20805 PF01584 CheW-like domain CEW87_20805 PF02895 Signal transducing histidine kinase, homodimeric domain CEW87_20810 PF04344 Chemotaxis phosphatase, CheZ CEW87_20815 PF00072 Response regulator receiver domain CEW87_20820 PF01584 CheW-like domain CEW87_20820 PF00072 Response regulator receiver domain CEW87_20825 PF01584 CheW-like domain CEW87_20825 PF00072 Response regulator receiver domain CEW87_20830 PF12729 Four helix bundle sensory module for signal transduction CEW87_20830 PF00672 HAMP domain CEW87_20830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW87_20835 PF00072 Response regulator receiver domain CEW87_20835 PF01339 CheB methylesterase CEW87_20840 PF03705 CheR methyltransferase, all-alpha domain CEW87_20840 PF01739 CheR methyltransferase, SAM binding domain CEW87_20845 PF13677 Membrane MotB of proton-channel complex MotA/MotB CEW87_20845 PF00691 OmpA family CEW87_20850 PF01618 MotA/TolQ/ExbB proton channel family CEW87_20855 PF05280 Flagellar transcriptional activator (FlhC) CEW87_20860 PF05247 Flagellar transcriptional activator (FlhD) CEW87_20865 PF00072 Response regulator receiver domain CEW87_20865 PF00990 Diguanylate cyclase, GGDEF domain CEW87_20880 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_20880 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CEW87_20880 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEW87_20880 PF01799 [2Fe-2S] binding domain CEW87_20885 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEW87_20885 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CEW87_20910 PF05523 WxcM-like, C-terminal CEW87_20920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEW87_20950 PF00700 Bacterial flagellin C-terminal helical region CEW87_20950 PF00669 Bacterial flagellin N-terminal helical region CEW87_20955 PF08241 Methyltransferase domain CEW87_20960 PF14307 Glycosyltransferase WbsX CEW87_20960 PF05045 Rhamnan synthesis protein F CEW87_20970 PF00669 Bacterial flagellin N-terminal helical region CEW87_20970 PF07196 Flagellin hook IN motif CEW87_20970 PF00700 Bacterial flagellin C-terminal helical region CEW87_20980 PF02465 Flagellar hook-associated protein 2 N-terminus CEW87_20980 PF07195 Flagellar hook-associated protein 2 C-terminus CEW87_20985 PF02561 Flagellar protein FliS CEW87_21000 PF01312 FlhB HrpN YscU SpaS Family CEW87_21005 PF07317 Flagellar regulator YcgR CEW87_21005 PF07238 PilZ domain CEW87_21010 PF07317 Flagellar regulator YcgR CEW87_21010 PF07238 PilZ domain CEW87_21015 PF02436 Conserved carboxylase domain CEW87_21015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEW87_21015 PF00682 HMGL-like CEW87_21015 PF00364 Biotin-requiring enzyme CEW87_21015 PF02785 Biotin carboxylase C-terminal domain CEW87_21015 PF00289 Biotin carboxylase, N-terminal domain CEW87_21020 PF02233 NAD(P) transhydrogenase beta subunit CEW87_21025 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CEW87_21030 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CEW87_21030 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CEW87_21035 PF02615 Malate/L-lactate dehydrogenase CEW87_21040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW87_21040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEW87_21050 PF01970 Tripartite tricarboxylate transporter TctA family CEW87_21055 PF03401 Tripartite tricarboxylate transporter family receptor CEW87_21060 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CEW87_21065 PF08666 SAF domain CEW87_21070 PF00392 Bacterial regulatory proteins, gntR family CEW87_21070 PF07702 UTRA domain CEW87_21075 PF07702 UTRA domain CEW87_21075 PF00392 Bacterial regulatory proteins, gntR family CEW87_21080 PF03601 Conserved hypothetical protein 698 CEW87_21085 PF00459 Inositol monophosphatase family CEW87_21090 PF00356 Bacterial regulatory proteins, lacI family CEW87_21100 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_21110 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_21125 PF08240 Alcohol dehydrogenase GroES-like domain CEW87_21125 PF00107 Zinc-binding dehydrogenase CEW87_21130 PF02049 Flagellar hook-basal body complex protein FliE CEW87_21135 PF00072 Response regulator receiver domain CEW87_21135 PF00158 Sigma-54 interaction domain CEW87_21135 PF02954 Bacterial regulatory protein, Fis family CEW87_21140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_21140 PF00512 His Kinase A (phospho-acceptor) domain CEW87_21140 PF00989 PAS fold CEW87_21145 PF08345 Flagellar M-ring protein C-terminal CEW87_21145 PF01514 Secretory protein of YscJ/FliF family CEW87_21150 PF14842 FliG N-terminal domain CEW87_21150 PF14841 FliG middle domain CEW87_21150 PF01706 FliG C-terminal domain CEW87_21160 PF18269 T3SS EscN ATPase C-terminal domain CEW87_21160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEW87_21165 PF02608 ABC transporter substrate-binding protein PnrA-like CEW87_21170 PF01979 Amidohydrolase family CEW87_21175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW87_21185 PF01050 Mannose-6-phosphate isomerase CEW87_21185 PF00483 Nucleotidyl transferase CEW87_21190 PF01507 Phosphoadenosine phosphosulfate reductase family CEW87_21195 PF00009 Elongation factor Tu GTP binding domain CEW87_21200 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CEW87_21205 PF00483 Nucleotidyl transferase CEW87_21210 PF04321 RmlD substrate binding domain CEW87_21215 PF16363 GDP-mannose 4,6 dehydratase CEW87_21220 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CEW87_21220 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CEW87_21225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_21225 PF03466 LysR substrate binding domain CEW87_21240 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CEW87_21240 PF00753 Metallo-beta-lactamase superfamily CEW87_21240 PF10996 Beta-Casp domain CEW87_21250 PF00483 Nucleotidyl transferase CEW87_21260 PF01451 Low molecular weight phosphotyrosine protein phosphatase CEW87_21270 PF02224 Cytidylate kinase CEW87_21275 PF02348 Cytidylyltransferase CEW87_21280 PF01380 SIS domain CEW87_21280 PF00571 CBS domain CEW87_21285 PF00793 DAHP synthetase I family CEW87_21295 PF00132 Bacterial transferase hexapeptide (six repeats) CEW87_21315 PF01370 NAD dependent epimerase/dehydratase family CEW87_21320 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CEW87_21325 PF00483 Nucleotidyl transferase CEW87_21330 PF04321 RmlD substrate binding domain CEW87_21335 PF16363 GDP-mannose 4,6 dehydratase CEW87_21340 PF02706 Chain length determinant protein CEW87_21340 PF13614 AAA domain CEW87_21340 PF13807 G-rich domain on putative tyrosine kinase CEW87_21345 PF02563 Polysaccharide biosynthesis/export protein CEW87_21345 PF10531 SLBB domain CEW87_21345 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CEW87_21355 PF02397 Bacterial sugar transferase CEW87_21360 PF00989 PAS fold CEW87_21360 PF00512 His Kinase A (phospho-acceptor) domain CEW87_21360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_21365 PF00072 Response regulator receiver domain CEW87_21370 PF00512 His Kinase A (phospho-acceptor) domain CEW87_21370 PF08448 PAS fold CEW87_21370 PF13188 PAS domain CEW87_21370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_21370 PF00072 Response regulator receiver domain CEW87_21380 PF11871 Domain of unknown function (DUF3391) CEW87_21380 PF01966 HD domain CEW87_21390 PF01979 Amidohydrolase family CEW87_21395 PF03600 Citrate transporter CEW87_21395 PF02080 TrkA-C domain CEW87_21425 PF00158 Sigma-54 interaction domain CEW87_21425 PF02954 Bacterial regulatory protein, Fis family CEW87_21425 PF00072 Response regulator receiver domain CEW87_21450 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CEW87_21450 PF01568 Molydopterin dinucleotide binding domain CEW87_21450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEW87_21450 PF00037 4Fe-4S binding domain CEW87_21450 PF00384 Molybdopterin oxidoreductase CEW87_21455 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CEW87_21455 PF10531 SLBB domain CEW87_21455 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEW87_21470 PF00990 Diguanylate cyclase, GGDEF domain CEW87_21505 PF00072 Response regulator receiver domain CEW87_21510 PF13419 Haloacid dehalogenase-like hydrolase CEW87_21515 PF07681 DoxX CEW87_21525 PF05114 Protein of unknown function (DUF692) CEW87_21550 PF17804 Tail specific protease N-terminal domain CEW87_21550 PF03572 Peptidase family S41 CEW87_21550 PF00595 PDZ domain CEW87_21550 PF11818 C-terminal domain of tail specific protease (DUF3340) CEW87_21570 PF01842 ACT domain CEW87_21570 PF13840 ACT domain CEW87_21570 PF00696 Amino acid kinase family CEW87_21585 PF01242 6-pyruvoyl tetrahydropterin synthase CEW87_21595 PF12795 Mechanosensitive ion channel porin domain CEW87_21595 PF00924 Mechanosensitive ion channel CEW87_21595 PF12794 Mechanosensitive ion channel inner membrane domain 1 CEW87_21600 PF13091 PLD-like domain CEW87_21605 PF01029 NusB family CEW87_21605 PF01189 16S rRNA methyltransferase RsmB/F CEW87_21615 PF00551 Formyl transferase CEW87_21625 PF08676 MutL C terminal dimerisation domain CEW87_21625 PF01119 DNA mismatch repair protein, C-terminal domain CEW87_21630 PF09335 SNARE associated Golgi protein CEW87_21640 PF00990 Diguanylate cyclase, GGDEF domain CEW87_21685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEW87_21685 PF00205 Thiamine pyrophosphate enzyme, central domain CEW87_21685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEW87_21690 PF10369 Small subunit of acetolactate synthase CEW87_21695 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CEW87_21695 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CEW87_21710 PF00486 Transcriptional regulatory protein, C terminal CEW87_21710 PF00072 Response regulator receiver domain CEW87_21715 PF00989 PAS fold CEW87_21715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_21715 PF00512 His Kinase A (phospho-acceptor) domain CEW87_21720 PF16916 Dimerisation domain of Zinc Transporter CEW87_21720 PF01545 Cation efflux family CEW87_21725 PF01066 CDP-alcohol phosphatidyltransferase CEW87_21735 PF00072 Response regulator receiver domain CEW87_21735 PF00486 Transcriptional regulatory protein, C terminal CEW87_21740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_21740 PF00512 His Kinase A (phospho-acceptor) domain CEW87_21740 PF08521 Two-component sensor kinase N-terminal CEW87_21760 PF08918 PhoQ Sensor CEW87_21760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_21765 PF00072 Response regulator receiver domain CEW87_21765 PF00486 Transcriptional regulatory protein, C terminal CEW87_21775 PF09086 Domain of unknown function (DUF1924) CEW87_21785 PF00970 Oxidoreductase FAD-binding domain CEW87_21785 PF00175 Oxidoreductase NAD-binding domain CEW87_21785 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW87_21790 PF00682 HMGL-like CEW87_21790 PF08502 LeuA allosteric (dimerisation) domain CEW87_21800 PF03358 NADPH-dependent FMN reductase CEW87_21805 PF03631 Virulence factor BrkB CEW87_21815 PF00886 Ribosomal protein S16 CEW87_21820 PF01782 RimM N-terminal domain CEW87_21820 PF05239 PRC-barrel domain CEW87_21825 PF01746 tRNA (Guanine-1)-methyltransferase CEW87_21830 PF01245 Ribosomal protein L19 CEW87_21840 PF03739 Lipopolysaccharide export system permease LptF/LptG CEW87_21845 PF02789 Cytosol aminopeptidase family, N-terminal domain CEW87_21845 PF00883 Cytosol aminopeptidase family, catalytic domain CEW87_21860 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW87_21870 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW87_21875 PF03466 LysR substrate binding domain CEW87_21875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_21880 PF10458 Valyl tRNA synthetase tRNA binding arm CEW87_21880 PF08264 Anticodon-binding domain of tRNA CEW87_21880 PF00133 tRNA synthetases class I (I, L, M and V) CEW87_21885 PF01206 Sulfurtransferase TusA CEW87_21890 PF01435 Peptidase family M48 CEW87_21895 PF01967 MoaC family CEW87_21925 PF00149 Calcineurin-like phosphoesterase CEW87_21950 PF00005 ABC transporter CEW87_21955 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_21970 PF04324 BFD-like [2Fe-2S] binding domain CEW87_21970 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW87_21970 PF18267 Rubredoxin NAD+ reductase C-terminal domain CEW87_21970 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEW87_21975 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CEW87_21975 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CEW87_21985 PF00158 Sigma-54 interaction domain CEW87_21985 PF02954 Bacterial regulatory protein, Fis family CEW87_21985 PF01590 GAF domain CEW87_22005 PF01292 Prokaryotic cytochrome b561 CEW87_22010 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEW87_22020 PF00171 Aldehyde dehydrogenase family CEW87_22025 PF02954 Bacterial regulatory protein, Fis family CEW87_22025 PF00158 Sigma-54 interaction domain CEW87_22025 PF01590 GAF domain CEW87_22040 PF00072 Response regulator receiver domain CEW87_22040 PF00486 Transcriptional regulatory protein, C terminal CEW87_22045 PF13426 PAS domain CEW87_22045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_22045 PF00072 Response regulator receiver domain CEW87_22050 PF13193 AMP-binding enzyme C-terminal domain CEW87_22050 PF00501 AMP-binding enzyme CEW87_22055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW87_22055 PF12806 Acetyl-CoA dehydrogenase C-terminal like CEW87_22055 PF02770 Acyl-CoA dehydrogenase, middle domain CEW87_22055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW87_22085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW87_22085 PF00005 ABC transporter CEW87_22090 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW87_22090 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_22095 PF00528 Binding-protein-dependent transport system inner membrane component CEW87_22100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW87_22105 PF01425 Amidase CEW87_22110 PF03466 LysR substrate binding domain CEW87_22110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW87_22130 PF12794 Mechanosensitive ion channel inner membrane domain 1 CEW87_22130 PF00924 Mechanosensitive ion channel CEW87_22130 PF12795 Mechanosensitive ion channel porin domain CEW87_22155 PF00271 Helicase conserved C-terminal domain CEW87_22155 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CEW87_22155 PF04851 Type III restriction enzyme, res subunit CEW87_22155 PF08463 EcoEI R protein C-terminal CEW87_22165 PF02384 N-6 DNA Methylase CEW87_22165 PF12161 HsdM N-terminal domain CEW87_22170 PF01420 Type I restriction modification DNA specificity domain CEW87_22195 PF00472 RF-1 domain CEW87_22210 PF00672 HAMP domain CEW87_22210 PF00512 His Kinase A (phospho-acceptor) domain CEW87_22210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW87_22215 PF00486 Transcriptional regulatory protein, C terminal CEW87_22215 PF00072 Response regulator receiver domain CEW87_22220 PF00127 Copper binding proteins, plastocyanin/azurin family