dqs_0053	PWY-4041	&gamma;-glutamyl cycle
dqs_0053	PWY-7942	dqs_0053
dqs_0055	PWY-4041	&gamma;-glutamyl cycle
dqs_0055	PWY-7942	dqs_0055
dqs_0118	PWY-6807	xyloglucan degradation II (exoglucanase)
dqs_0121	PWY-3162	L-tryptophan degradation V (side chain pathway)
dqs_0121	PWY-5057	L-valine degradation II
dqs_0121	PWY-5076	L-leucine degradation III
dqs_0121	PWY-5078	L-isoleucine degradation II
dqs_0121	PWY-5079	L-phenylalanine degradation III
dqs_0121	PWY-5082	L-methionine degradation III
dqs_0121	PWY-5480	pyruvate fermentation to ethanol I
dqs_0121	PWY-5486	pyruvate fermentation to ethanol II
dqs_0121	PWY-5751	phenylethanol biosynthesis
dqs_0121	PWY-6313	serotonin degradation
dqs_0121	PWY-6333	acetaldehyde biosynthesis I
dqs_0121	PWY-6342	noradrenaline and adrenaline degradation
dqs_0121	PWY-6587	pyruvate fermentation to ethanol III
dqs_0121	PWY-6802	salidroside biosynthesis
dqs_0121	PWY-6871	3-methylbutanol biosynthesis
dqs_0121	PWY-7013	L-1,2-propanediol degradation
dqs_0121	PWY-7111	pyruvate fermentation to isobutanol (engineered)
dqs_0121	PWY-7118	chitin degradation to ethanol
dqs_0121	PWY-7396	butanol and isobutanol biosynthesis (engineered)
dqs_0124	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
dqs_0124	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
dqs_0126	PWY-6617	adenosine nucleotides degradation III
dqs_0142	PWY-5057	L-valine degradation II
dqs_0142	PWY-5076	L-leucine degradation III
dqs_0142	PWY-5078	L-isoleucine degradation II
dqs_0142	PWY-5101	L-isoleucine biosynthesis II
dqs_0142	PWY-5103	L-isoleucine biosynthesis III
dqs_0142	PWY-5104	L-isoleucine biosynthesis IV
dqs_0142	PWY-5108	L-isoleucine biosynthesis V
dqs_0142	PWY-7767	dqs_0142
dqs_0166	PWY-7980	dqs_0166
dqs_0168	PWY-7980	dqs_0168
dqs_0171	PWY-5839	menaquinol-7 biosynthesis
dqs_0171	PWY-5844	menaquinol-9 biosynthesis
dqs_0171	PWY-5849	menaquinol-6 biosynthesis
dqs_0171	PWY-5890	menaquinol-10 biosynthesis
dqs_0171	PWY-5891	menaquinol-11 biosynthesis
dqs_0171	PWY-5892	menaquinol-12 biosynthesis
dqs_0171	PWY-5895	menaquinol-13 biosynthesis
dqs_0181	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
dqs_0186	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
dqs_0186	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
dqs_0187	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
dqs_0187	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
dqs_0187	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
dqs_0187	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
dqs_0189	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
dqs_0189	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
dqs_0192	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
dqs_0192	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
dqs_0193	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
dqs_0193	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
dqs_0206	PWY-6654	phosphopantothenate biosynthesis III
dqs_0212	PWY-5958	acridone alkaloid biosynthesis
dqs_0212	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
dqs_0212	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
dqs_0221	PWY-5692	allantoin degradation to glyoxylate II
dqs_0221	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
dqs_0230	PWY-7425	2-chloroacrylate degradation I
dqs_0250	PWY-6610	adenine and adenosine salvage IV
dqs_0272	PWY-5971	palmitate biosynthesis II (bacteria and plants)
dqs_0272	PWY-5973	<i>cis</i>-vaccenate biosynthesis
dqs_0272	PWY-5989	stearate biosynthesis II (bacteria and plants)
dqs_0272	PWY-5994	palmitate biosynthesis I (animals and fungi)
dqs_0272	PWY-6113	superpathway of mycolate biosynthesis
dqs_0272	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
dqs_0272	PWY-6519	8-amino-7-oxononanoate biosynthesis I
dqs_0272	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
dqs_0272	PWY-7663	gondoate biosynthesis (anaerobic)
dqs_0272	PWY-7664	oleate biosynthesis IV (anaerobic)
dqs_0272	PWY-7858	dqs_0272
dqs_0272	PWYG-321	mycolate biosynthesis
dqs_0303	PWY-7019	butirosin biosynthesis
dqs_0305	PWY-4381	fatty acid biosynthesis initiation I
dqs_0314	PWY-1361	benzoyl-CoA degradation I (aerobic)
dqs_0314	PWY-5109	2-methylbutanoate biosynthesis
dqs_0314	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
dqs_0314	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
dqs_0314	PWY-5177	glutaryl-CoA degradation
dqs_0314	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
dqs_0314	PWY-6435	4-hydroxybenzoate biosynthesis V
dqs_0314	PWY-6583	pyruvate fermentation to butanol I
dqs_0314	PWY-6863	pyruvate fermentation to hexanol
dqs_0314	PWY-6883	pyruvate fermentation to butanol II
dqs_0314	PWY-6944	androstenedione degradation
dqs_0314	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
dqs_0314	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
dqs_0314	PWY-7007	methyl ketone biosynthesis
dqs_0314	PWY-7046	4-coumarate degradation (anaerobic)
dqs_0314	PWY-7094	fatty acid salvage
dqs_0314	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
dqs_0314	PWY-735	jasmonic acid biosynthesis
dqs_0314	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
dqs_0314	PWY-7606	docosahexaenoate biosynthesis III (mammals)
dqs_0314	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
dqs_0314	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
dqs_0314	PWY-7726	dqs_0314
dqs_0314	PWY-7778	dqs_0314
dqs_0314	PWY-7779	dqs_0314
dqs_0316	PWY-1341	phenylacetate degradation II (anaerobic)
dqs_0316	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
dqs_0316	PWY-7716	dqs_0316
dqs_0323	PWY-1361	benzoyl-CoA degradation I (aerobic)
dqs_0323	PWY-2361	3-oxoadipate degradation
dqs_0323	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
dqs_0331	PWY-6167	flavin biosynthesis II (archaea)
dqs_0331	PWY-6168	flavin biosynthesis III (fungi)
dqs_0332	PWY-6167	flavin biosynthesis II (archaea)
dqs_0332	PWY-6168	flavin biosynthesis III (fungi)
dqs_0332	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
dqs_0332	PWY-7991	dqs_0332
dqs_0333	PWY-6167	flavin biosynthesis II (archaea)
dqs_0333	PWY-6168	flavin biosynthesis III (fungi)
dqs_0333	PWY-7980	dqs_0333
dqs_0336	PWY-723	alkylnitronates degradation
dqs_0369	PWY-3841	folate transformations II
dqs_0369	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
dqs_0369	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
dqs_0369	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
dqs_0369	PWY-7199	pyrimidine deoxyribonucleosides salvage
dqs_0369	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
dqs_0378	PWY-6936	seleno-amino acid biosynthesis
dqs_0378	PWY-7274	D-cycloserine biosynthesis
dqs_0378	PWY-7870	dqs_0378
dqs_0381	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
dqs_0388	PWY-3341	L-proline biosynthesis III
dqs_0388	PWY-4981	L-proline biosynthesis II (from arginine)
dqs_0388	PWY-6344	L-ornithine degradation II (Stickland reaction)
dqs_0388	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
dqs_0424	PWY-6703	preQ<sub>0</sub> biosynthesis
dqs_0425	PWY-6703	preQ<sub>0</sub> biosynthesis
dqs_0439	PWY-5278	sulfite oxidation III
dqs_0439	PWY-5340	sulfate activation for sulfonation
dqs_0439	PWY-6683	sulfate reduction III (assimilatory)
dqs_0439	PWY-6932	selenate reduction
dqs_0440	PWY-5278	sulfite oxidation III
dqs_0440	PWY-5340	sulfate activation for sulfonation
dqs_0440	PWY-6683	sulfate reduction III (assimilatory)
dqs_0440	PWY-6932	selenate reduction
dqs_0443	PWY-6683	sulfate reduction III (assimilatory)
dqs_0448	PWY-5392	reductive TCA cycle II
dqs_0448	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
dqs_0448	PWY-5690	TCA cycle II (plants and fungi)
dqs_0448	PWY-5913	TCA cycle VI (obligate autotrophs)
dqs_0448	PWY-6728	methylaspartate cycle
dqs_0448	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
dqs_0448	PWY-7254	TCA cycle VII (acetate-producers)
dqs_0448	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
dqs_0474	PWY-7094	fatty acid salvage
dqs_0474	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
dqs_0476	PWY-1361	benzoyl-CoA degradation I (aerobic)
dqs_0476	PWY-5109	2-methylbutanoate biosynthesis
dqs_0476	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
dqs_0476	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
dqs_0476	PWY-5177	glutaryl-CoA degradation
dqs_0476	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
dqs_0476	PWY-6435	4-hydroxybenzoate biosynthesis V
dqs_0476	PWY-6583	pyruvate fermentation to butanol I
dqs_0476	PWY-6863	pyruvate fermentation to hexanol
dqs_0476	PWY-6883	pyruvate fermentation to butanol II
dqs_0476	PWY-6944	androstenedione degradation
dqs_0476	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
dqs_0476	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
dqs_0476	PWY-7007	methyl ketone biosynthesis
dqs_0476	PWY-7046	4-coumarate degradation (anaerobic)
dqs_0476	PWY-7094	fatty acid salvage
dqs_0476	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
dqs_0476	PWY-735	jasmonic acid biosynthesis
dqs_0476	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
dqs_0476	PWY-7606	docosahexaenoate biosynthesis III (mammals)
dqs_0476	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
dqs_0476	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
dqs_0476	PWY-7726	dqs_0476
dqs_0476	PWY-7778	dqs_0476
dqs_0476	PWY-7779	dqs_0476
dqs_0479	PWY-1361	benzoyl-CoA degradation I (aerobic)
dqs_0479	PWY-5109	2-methylbutanoate biosynthesis
dqs_0479	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
dqs_0479	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
dqs_0479	PWY-5177	glutaryl-CoA degradation
dqs_0479	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
dqs_0479	PWY-6435	4-hydroxybenzoate biosynthesis V
dqs_0479	PWY-6583	pyruvate fermentation to butanol I
dqs_0479	PWY-6863	pyruvate fermentation to hexanol
dqs_0479	PWY-6883	pyruvate fermentation to butanol II
dqs_0479	PWY-6944	androstenedione degradation
dqs_0479	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
dqs_0479	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
dqs_0479	PWY-7007	methyl ketone biosynthesis
dqs_0479	PWY-7046	4-coumarate degradation (anaerobic)
dqs_0479	PWY-7094	fatty acid salvage
dqs_0479	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
dqs_0479	PWY-735	jasmonic acid biosynthesis
dqs_0479	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
dqs_0479	PWY-7606	docosahexaenoate biosynthesis III (mammals)
dqs_0479	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
dqs_0479	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
dqs_0479	PWY-7726	dqs_0479
dqs_0479	PWY-7778	dqs_0479
dqs_0479	PWY-7779	dqs_0479
dqs_0489	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
dqs_0489	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
dqs_0489	PWY-6148	tetrahydromethanopterin biosynthesis
dqs_0489	PWY-7742	dqs_0489
dqs_0489	PWY-7745	dqs_0489
dqs_0489	PWY-7929	dqs_0489
dqs_0489	PWY-7934	dqs_0489
dqs_0489	PWY-7935	dqs_0489
dqs_0519	PWY-5269	cardiolipin biosynthesis II
dqs_0519	PWY-5668	cardiolipin biosynthesis I
dqs_0519	PWY-7817	dqs_0519
dqs_0520	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
dqs_0520	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
dqs_0520	PWY-6896	thiamin salvage I
dqs_0520	PWY-6897	thiamin salvage II
dqs_0532	PWY-6854	ethylene biosynthesis III (microbes)
dqs_0533	PWY-6823	molybdenum cofactor biosynthesis
dqs_0560	PWY-6936	seleno-amino acid biosynthesis
dqs_0560	PWY-7274	D-cycloserine biosynthesis
dqs_0560	PWY-7870	dqs_0560
dqs_0561	PWY-3081	L-lysine biosynthesis V
dqs_0561	PWY-6871	3-methylbutanol biosynthesis
dqs_0561	PWY-7710	dqs_0561
dqs_0562	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
dqs_0654	PWY-2201	folate transformations I
dqs_0654	PWY-3841	folate transformations II
dqs_0656	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
dqs_0658	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
dqs_0658	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
dqs_0662	PWY-2941	L-lysine biosynthesis II
dqs_0662	PWY-5097	L-lysine biosynthesis VI
dqs_0701	PWY-5101	L-isoleucine biosynthesis II
dqs_0701	PWY-5103	L-isoleucine biosynthesis III
dqs_0701	PWY-5104	L-isoleucine biosynthesis IV
dqs_0701	PWY-7111	pyruvate fermentation to isobutanol (engineered)
dqs_0728	PWY-4081	glutathione redox reactions I
dqs_0740	PWY-5674	nitrate reduction IV (dissimilatory)
dqs_0756	PWY-4381	fatty acid biosynthesis initiation I
dqs_0756	PWY-5743	3-hydroxypropanoate cycle
dqs_0756	PWY-5744	glyoxylate assimilation
dqs_0756	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
dqs_0756	PWY-6722	candicidin biosynthesis
dqs_0767	PWY-5392	reductive TCA cycle II
dqs_0767	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
dqs_0767	PWY-5690	TCA cycle II (plants and fungi)
dqs_0767	PWY-5913	TCA cycle VI (obligate autotrophs)
dqs_0767	PWY-6728	methylaspartate cycle
dqs_0767	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
dqs_0767	PWY-7254	TCA cycle VII (acetate-producers)
dqs_0767	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
dqs_0769	PWY-7255	ergothioneine biosynthesis I (bacteria)
dqs_0775	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
dqs_0775	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
dqs_0775	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
dqs_0775	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
dqs_0776	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
dqs_0781	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
dqs_0802	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
dqs_0802	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
dqs_0802	PWY-6897	thiamin salvage II
dqs_0802	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
dqs_0802	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
dqs_0802	PWY-7356	thiamin salvage IV (yeast)
dqs_0802	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
dqs_0805	PWY-7851	dqs_0805
dqs_0807	PWY-3961	phosphopantothenate biosynthesis II
dqs_0808	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
dqs_0808	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
dqs_0812	PWY-381	nitrate reduction II (assimilatory)
dqs_0812	PWY-5675	nitrate reduction V (assimilatory)
dqs_0812	PWY-6549	L-glutamine biosynthesis III
dqs_0812	PWY-6963	ammonia assimilation cycle I
dqs_0812	PWY-6964	ammonia assimilation cycle II
dqs_0815	PWY-5316	nicotine biosynthesis
dqs_0815	PWY-7342	superpathway of nicotine biosynthesis
dqs_0827	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
dqs_0831	PWY-7560	methylerythritol phosphate pathway II
dqs_0837	PWY-7851	dqs_0837
dqs_0863	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
dqs_0863	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
dqs_0885	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
dqs_0885	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
dqs_0885	PWY-7953	dqs_0885
dqs_0890	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
dqs_0891	PWY-1281	sulfoacetaldehyde degradation I
dqs_0891	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
dqs_0891	PWY-5482	pyruvate fermentation to acetate II
dqs_0891	PWY-5485	pyruvate fermentation to acetate IV
dqs_0891	PWY-5497	purine nucleobases degradation II (anaerobic)
dqs_0891	PWY-6637	sulfolactate degradation II
dqs_0891	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
dqs_0911	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
dqs_0912	PWY-6910	hydroxymethylpyrimidine salvage
dqs_0912	PWY-7356	thiamin salvage IV (yeast)
dqs_0912	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
dqs_0922	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
dqs_0930	PWY-7039	phosphatidate metabolism, as a signaling molecule
dqs_0930	PWY-7817	dqs_0930
dqs_0936	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
dqs_0936	PWY-6416	quinate degradation II
dqs_0936	PWY-6707	gallate biosynthesis
dqs_0939	PWY-7883	dqs_0939
dqs_0941	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
dqs_0944	PWY-5686	UMP biosynthesis
dqs_0944	PWY-7790	dqs_0944
dqs_0944	PWY-7791	dqs_0944
dqs_0949	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
dqs_0949	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
dqs_0951	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
dqs_0951	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
dqs_0951	PWY-7953	dqs_0951
dqs_0952	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
dqs_0952	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
dqs_0952	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
dqs_0953	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
dqs_0953	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
dqs_0954	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
dqs_0954	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
dqs_0954	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
dqs_0954	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
dqs_0955	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
dqs_0955	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
dqs_0955	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
dqs_0955	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
dqs_0956	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
dqs_0956	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
dqs_0956	PWY-7953	dqs_0956
dqs_0957	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
dqs_0957	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
dqs_0957	PWY-7953	dqs_0957
dqs_0966	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
dqs_0972	PWY-6123	inosine-5'-phosphate biosynthesis I
dqs_0972	PWY-6124	inosine-5'-phosphate biosynthesis II
dqs_0972	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
dqs_0972	PWY-7234	inosine-5'-phosphate biosynthesis III
dqs_0978	PWY-6700	queuosine biosynthesis
dqs_0979	PWY-6700	queuosine biosynthesis
dqs_0987	PWY-4381	fatty acid biosynthesis initiation I
dqs_0987	PWY-5743	3-hydroxypropanoate cycle
dqs_0987	PWY-5744	glyoxylate assimilation
dqs_0987	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
dqs_0987	PWY-6722	candicidin biosynthesis
dqs_0995	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
dqs_0995	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
dqs_0995	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
dqs_0995	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
dqs_0995	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
dqs_0995	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
dqs_0995	PWY-7205	CMP phosphorylation
dqs_0995	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
dqs_0995	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
dqs_0995	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
dqs_0995	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
dqs_0995	PWY-7224	purine deoxyribonucleosides salvage
dqs_0995	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
dqs_0995	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
dqs_1010	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
dqs_1019	PWY-5194	siroheme biosynthesis
dqs_1019	PWY-5196	factor 430 biosynthesis
dqs_1019	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
dqs_1034	PWY-3781	aerobic respiration I (cytochrome c)
dqs_1034	PWY-6692	Fe(II) oxidation
dqs_1034	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
dqs_1034	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
dqs_1042	PWY-5484	glycolysis II (from fructose 6-phosphate)
dqs_1081	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
dqs_1090	PWY-4983	L-citrulline-nitric oxide cycle
dqs_1090	PWY-4984	urea cycle
dqs_1090	PWY-5	canavanine biosynthesis
dqs_1090	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
dqs_1090	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
dqs_1093	PWY-1622	formaldehyde assimilation I (serine pathway)
dqs_1093	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
dqs_1093	PWY-5913	TCA cycle VI (obligate autotrophs)
dqs_1093	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
dqs_1093	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
dqs_1093	PWY-6549	L-glutamine biosynthesis III
dqs_1093	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
dqs_1093	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
dqs_1093	PWY-7124	ethylene biosynthesis V (engineered)
dqs_1094	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
dqs_1094	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
dqs_1095	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
dqs_1095	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
dqs_1124	PWY-5676	acetyl-CoA fermentation to butanoate II
dqs_1124	PWY-5741	ethylmalonyl-CoA pathway
dqs_1124	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
dqs_1124	PWY-7948	dqs_1124
dqs_1125	PWY-5676	acetyl-CoA fermentation to butanoate II
dqs_1125	PWY-5741	ethylmalonyl-CoA pathway
dqs_1125	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
dqs_1125	PWY-7948	dqs_1125
dqs_1136	PWY-1361	benzoyl-CoA degradation I (aerobic)
dqs_1136	PWY-5109	2-methylbutanoate biosynthesis
dqs_1136	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
dqs_1136	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
dqs_1136	PWY-5177	glutaryl-CoA degradation
dqs_1136	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
dqs_1136	PWY-6435	4-hydroxybenzoate biosynthesis V
dqs_1136	PWY-6583	pyruvate fermentation to butanol I
dqs_1136	PWY-6863	pyruvate fermentation to hexanol
dqs_1136	PWY-6883	pyruvate fermentation to butanol II
dqs_1136	PWY-6944	androstenedione degradation
dqs_1136	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
dqs_1136	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
dqs_1136	PWY-7007	methyl ketone biosynthesis
dqs_1136	PWY-7046	4-coumarate degradation (anaerobic)
dqs_1136	PWY-7094	fatty acid salvage
dqs_1136	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
dqs_1136	PWY-735	jasmonic acid biosynthesis
dqs_1136	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
dqs_1136	PWY-7606	docosahexaenoate biosynthesis III (mammals)
dqs_1136	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
dqs_1136	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
dqs_1136	PWY-7726	dqs_1136
dqs_1136	PWY-7778	dqs_1136
dqs_1136	PWY-7779	dqs_1136
dqs_1137	PWY-7980	dqs_1137
dqs_1142	PWY-5101	L-isoleucine biosynthesis II
dqs_1142	PWY-5103	L-isoleucine biosynthesis III
dqs_1142	PWY-5104	L-isoleucine biosynthesis IV
dqs_1142	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
dqs_1142	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
dqs_1142	PWY-6389	(<i>S</i>)-acetoin biosynthesis
dqs_1142	PWY-7111	pyruvate fermentation to isobutanol (engineered)
dqs_1144	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
dqs_1149	PWY-7396	butanol and isobutanol biosynthesis (engineered)
dqs_1150	PWY-2941	L-lysine biosynthesis II
dqs_1150	PWY-2942	L-lysine biosynthesis III
dqs_1150	PWY-5097	L-lysine biosynthesis VI
dqs_1150	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
dqs_1150	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
dqs_1150	PWY-6559	spermidine biosynthesis II
dqs_1150	PWY-6562	norspermidine biosynthesis
dqs_1150	PWY-7153	grixazone biosynthesis
dqs_1150	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
dqs_1150	PWY-7977	dqs_1150
dqs_1157	PWY-4381	fatty acid biosynthesis initiation I
dqs_1157	PWY-5743	3-hydroxypropanoate cycle
dqs_1157	PWY-5744	glyoxylate assimilation
dqs_1157	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
dqs_1157	PWY-6722	candicidin biosynthesis
dqs_1158	PWY-2161	folate polyglutamylation
dqs_1161	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
dqs_1161	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
dqs_1161	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
dqs_1161	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
dqs_1176	PWY-3461	L-tyrosine biosynthesis II
dqs_1176	PWY-3462	L-phenylalanine biosynthesis II
dqs_1176	PWY-6120	L-tyrosine biosynthesis III
dqs_1176	PWY-6627	salinosporamide A biosynthesis
dqs_1176	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
dqs_1176	PWY-7626	bacilysin biosynthesis
dqs_1178	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
dqs_1179	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
dqs_1179	PWY-7205	CMP phosphorylation
dqs_1184	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
dqs_1184	PWY-7820	dqs_1184
dqs_1185	PWY-6936	seleno-amino acid biosynthesis
dqs_1197	PWY-5381	pyridine nucleotide cycling (plants)
dqs_1197	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
dqs_1197	PWY-6596	adenosine nucleotides degradation I
dqs_1197	PWY-6606	guanosine nucleotides degradation II
dqs_1197	PWY-6607	guanosine nucleotides degradation I
dqs_1197	PWY-6608	guanosine nucleotides degradation III
dqs_1197	PWY-7185	UTP and CTP dephosphorylation I
dqs_1197	PWY-7821	dqs_1197
dqs_1206	PWY-2941	L-lysine biosynthesis II
dqs_1206	PWY-2942	L-lysine biosynthesis III
dqs_1206	PWY-5097	L-lysine biosynthesis VI
dqs_1228	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
dqs_1249	PWY-7851	dqs_1249
dqs_1252	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
dqs_1257	PWY-5913	TCA cycle VI (obligate autotrophs)
dqs_1257	PWY-6549	L-glutamine biosynthesis III
dqs_1257	PWY-6728	methylaspartate cycle
dqs_1257	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
dqs_1257	PWY-7124	ethylene biosynthesis V (engineered)
dqs_1257	PWY-7254	TCA cycle VII (acetate-producers)
dqs_1257	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
dqs_1258	PWY-5913	TCA cycle VI (obligate autotrophs)
dqs_1258	PWY-6549	L-glutamine biosynthesis III
dqs_1258	PWY-6728	methylaspartate cycle
dqs_1258	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
dqs_1258	PWY-7124	ethylene biosynthesis V (engineered)
dqs_1258	PWY-7254	TCA cycle VII (acetate-producers)
dqs_1258	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
dqs_1266	PWY-723	alkylnitronates degradation
dqs_1267	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
dqs_1267	PWY-7118	chitin degradation to ethanol
dqs_1267	PWY-7294	xylose degradation IV
dqs_1267	PWY-7295	L-arabinose degradation IV
dqs_1267	PWY-7854	dqs_1267
dqs_1288	PWY-6683	sulfate reduction III (assimilatory)
dqs_1292	PWY-5694	allantoin degradation to glyoxylate I
dqs_1292	PWY-5705	allantoin degradation to glyoxylate III
dqs_1293	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
dqs_1295	PWY-5691	urate degradation to allantoin I
dqs_1295	PWY-7394	urate degradation to allantoin II
dqs_1295	PWY-7849	dqs_1295
dqs_1297	PWY-5691	urate degradation to allantoin I
dqs_1297	PWY-7394	urate degradation to allantoin II
dqs_1297	PWY-7849	dqs_1297
dqs_1302	PWY-6420	pyrroloquinoline quinone biosynthesis
dqs_1312	PWY-5663	tetrahydrobiopterin biosynthesis I
dqs_1312	PWY-5664	tetrahydrobiopterin biosynthesis II
dqs_1312	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
dqs_1312	PWY-6703	preQ<sub>0</sub> biosynthesis
dqs_1312	PWY-6983	tetrahydrobiopterin biosynthesis III
dqs_1312	PWY-7442	drosopterin and aurodrosopterin biosynthesis
dqs_1312	PWY-7852	dqs_1312
dqs_1313	PWY-6891	thiazole biosynthesis II (Bacillus)
dqs_1313	PWY-6892	thiazole biosynthesis I (E. coli)
dqs_1313	PWY-7560	methylerythritol phosphate pathway II
dqs_1317	PWY-7560	methylerythritol phosphate pathway II
dqs_1319	PWY-7884	dqs_1319
dqs_1321	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
dqs_1321	PWY-6167	flavin biosynthesis II (archaea)
dqs_1321	PWY-6168	flavin biosynthesis III (fungi)
dqs_1321	PWY-7863	dqs_1321
dqs_1323	PWY-5386	methylglyoxal degradation I
dqs_1341	PWY-5386	methylglyoxal degradation I
dqs_1350	PWY-3781	aerobic respiration I (cytochrome c)
dqs_1350	PWY-6692	Fe(II) oxidation
dqs_1350	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
dqs_1350	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
dqs_1355	PWY-6823	molybdenum cofactor biosynthesis
dqs_1360	PWY-6700	queuosine biosynthesis
dqs_1391	PWY-5839	menaquinol-7 biosynthesis
dqs_1391	PWY-5844	menaquinol-9 biosynthesis
dqs_1391	PWY-5849	menaquinol-6 biosynthesis
dqs_1391	PWY-5890	menaquinol-10 biosynthesis
dqs_1391	PWY-5891	menaquinol-11 biosynthesis
dqs_1391	PWY-5892	menaquinol-12 biosynthesis
dqs_1391	PWY-5895	menaquinol-13 biosynthesis
dqs_1462	PWY-3781	aerobic respiration I (cytochrome c)
dqs_1462	PWY-4521	arsenite oxidation I (respiratory)
dqs_1462	PWY-6692	Fe(II) oxidation
dqs_1462	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
dqs_1474	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
dqs_1480	PWY-7805	dqs_1480
dqs_1480	PWY-7807	dqs_1480
dqs_1482	PWY-5381	pyridine nucleotide cycling (plants)
dqs_1482	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
dqs_1482	PWY-7761	dqs_1482
dqs_1491	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
dqs_1493	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
dqs_1493	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
dqs_1495	PWY-6891	thiazole biosynthesis II (Bacillus)
dqs_1495	PWY-6892	thiazole biosynthesis I (E. coli)
dqs_1495	PWY-7560	methylerythritol phosphate pathway II
dqs_1499	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
dqs_1499	PWY-2201	folate transformations I
dqs_1499	PWY-3841	folate transformations II
dqs_1499	PWY-5030	L-histidine degradation III
dqs_1499	PWY-5497	purine nucleobases degradation II (anaerobic)
dqs_1499	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
dqs_1499	PWY-7909	dqs_1499
dqs_1500	PWY-6123	inosine-5'-phosphate biosynthesis I
dqs_1500	PWY-7234	inosine-5'-phosphate biosynthesis III
dqs_1504	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
dqs_1504	PWY-5686	UMP biosynthesis
dqs_1504	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
dqs_1504	PWY-7790	dqs_1504
dqs_1504	PWY-7791	dqs_1504
dqs_1505	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
dqs_1505	PWY-5686	UMP biosynthesis
dqs_1505	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
dqs_1505	PWY-7790	dqs_1505
dqs_1505	PWY-7791	dqs_1505
dqs_1511	PWY-6614	tetrahydrofolate biosynthesis
dqs_1512	PWY-6749	CMP-legionaminate biosynthesis I
dqs_1517	PWY-1042	glycolysis IV (plant cytosol)
dqs_1517	PWY-5484	glycolysis II (from fructose 6-phosphate)
dqs_1517	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
dqs_1517	PWY-7003	glycerol degradation to butanol
dqs_1535	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
dqs_1535	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
dqs_1535	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
dqs_1535	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
dqs_1535	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
dqs_1535	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
dqs_1535	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
dqs_1535	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
dqs_1537	PWY-5382	hydrogen oxidation II (aerobic, NAD)
dqs_1537	PWY-6758	hydrogen production II
dqs_1587	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
dqs_1587	PWY-5723	Rubisco shunt
dqs_1589	PWY-6854	ethylene biosynthesis III (microbes)
dqs_1595	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
dqs_1596	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
dqs_1597	PWY-1042	glycolysis IV (plant cytosol)
dqs_1597	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
dqs_1597	PWY-5484	glycolysis II (from fructose 6-phosphate)
dqs_1597	PWY-7385	1,3-propanediol biosynthesis (engineered)
dqs_1598	PWY-4041	&gamma;-glutamyl cycle
dqs_1598	PWY-4061	glutathione-mediated detoxification I
dqs_1598	PWY-5826	hypoglycin biosynthesis
dqs_1598	PWY-6842	glutathione-mediated detoxification II
dqs_1598	PWY-7112	4-hydroxy-2-nonenal detoxification
dqs_1598	PWY-7559	glutathione degradation (DUG pathway - yeast)
dqs_1602	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
dqs_1605	PWY-7892	dqs_1605
dqs_1628	PWY-7805	dqs_1628
dqs_1628	PWY-7807	dqs_1628
dqs_1642	PWY-3801	sucrose degradation II (sucrose synthase)
dqs_1642	PWY-5054	sorbitol biosynthesis I
dqs_1642	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
dqs_1642	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
dqs_1642	PWY-5659	GDP-mannose biosynthesis
dqs_1642	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
dqs_1642	PWY-621	sucrose degradation III (sucrose invertase)
dqs_1642	PWY-622	starch biosynthesis
dqs_1642	PWY-6981	chitin biosynthesis
dqs_1642	PWY-6992	1,5-anhydrofructose degradation
dqs_1642	PWY-7238	sucrose biosynthesis II
dqs_1642	PWY-7347	sucrose biosynthesis III
dqs_1642	PWY-7385	1,3-propanediol biosynthesis (engineered)
dqs_1650	PWY-5279	sulfite oxidation II
dqs_1657	PWY-5747	2-methylcitrate cycle II
dqs_1661	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
dqs_1661	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
dqs_1670	PWY-1622	formaldehyde assimilation I (serine pathway)
dqs_1670	PWY-5392	reductive TCA cycle II
dqs_1670	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
dqs_1670	PWY-5690	TCA cycle II (plants and fungi)
dqs_1670	PWY-5913	TCA cycle VI (obligate autotrophs)
dqs_1670	PWY-6728	methylaspartate cycle
dqs_1670	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
dqs_1670	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
dqs_1670	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
dqs_1674	PWY-3781	aerobic respiration I (cytochrome c)
dqs_1674	PWY-4302	aerobic respiration III (alternative oxidase pathway)
dqs_1674	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
dqs_1674	PWY-5690	TCA cycle II (plants and fungi)
dqs_1674	PWY-6728	methylaspartate cycle
dqs_1674	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
dqs_1674	PWY-7254	TCA cycle VII (acetate-producers)
dqs_1674	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
dqs_1675	PWY-3781	aerobic respiration I (cytochrome c)
dqs_1675	PWY-4302	aerobic respiration III (alternative oxidase pathway)
dqs_1675	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
dqs_1675	PWY-5690	TCA cycle II (plants and fungi)
dqs_1675	PWY-6728	methylaspartate cycle
dqs_1675	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
dqs_1675	PWY-7254	TCA cycle VII (acetate-producers)
dqs_1675	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
dqs_1678	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
dqs_1679	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
dqs_1680	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
dqs_1680	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
dqs_1685	PWY-6823	molybdenum cofactor biosynthesis
dqs_1687	PWY-6823	molybdenum cofactor biosynthesis
dqs_1687	PWY-7887	dqs_1687
dqs_1692	PWY-5971	palmitate biosynthesis II (bacteria and plants)
dqs_1692	PWY-5973	<i>cis</i>-vaccenate biosynthesis
dqs_1692	PWY-5989	stearate biosynthesis II (bacteria and plants)
dqs_1692	PWY-6113	superpathway of mycolate biosynthesis
dqs_1692	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
dqs_1692	PWY-6519	8-amino-7-oxononanoate biosynthesis I
dqs_1692	PWY-7663	gondoate biosynthesis (anaerobic)
dqs_1692	PWY-7664	oleate biosynthesis IV (anaerobic)
dqs_1692	PWY-7858	dqs_1692
dqs_1692	PWYG-321	mycolate biosynthesis
dqs_1703	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
dqs_1703	PWY-6596	adenosine nucleotides degradation I
dqs_1703	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
dqs_1704	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
dqs_1718	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
dqs_1718	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
dqs_1718	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
dqs_1718	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
dqs_1718	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
dqs_1718	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
dqs_1730	PWY-6823	molybdenum cofactor biosynthesis
dqs_1735	PWY-5913	TCA cycle VI (obligate autotrophs)
dqs_1735	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
dqs_1735	PWY-6638	sulfolactate degradation III
dqs_1735	PWY-6642	(<i>R</i>)-cysteate degradation
dqs_1735	PWY-6643	coenzyme M biosynthesis II
dqs_1735	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
dqs_1735	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
dqs_1735	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
dqs_1748	PWY-4381	fatty acid biosynthesis initiation I
dqs_1749	PWY-4381	fatty acid biosynthesis initiation I
dqs_1749	PWY-6799	fatty acid biosynthesis (plant mitochondria)
dqs_1749	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
dqs_1750	PWY-5367	petroselinate biosynthesis
dqs_1750	PWY-5971	palmitate biosynthesis II (bacteria and plants)
dqs_1750	PWY-5973	<i>cis</i>-vaccenate biosynthesis
dqs_1750	PWY-5989	stearate biosynthesis II (bacteria and plants)
dqs_1750	PWY-5994	palmitate biosynthesis I (animals and fungi)
dqs_1750	PWY-6113	superpathway of mycolate biosynthesis
dqs_1750	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
dqs_1750	PWY-6519	8-amino-7-oxononanoate biosynthesis I
dqs_1750	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
dqs_1750	PWY-7663	gondoate biosynthesis (anaerobic)
dqs_1750	PWY-7664	oleate biosynthesis IV (anaerobic)
dqs_1750	PWY-7858	dqs_1750
dqs_1750	PWYG-321	mycolate biosynthesis
dqs_1754	PWY-5316	nicotine biosynthesis
dqs_1754	PWY-7342	superpathway of nicotine biosynthesis
dqs_1771	PWY-6012	acyl carrier protein metabolism I
dqs_1771	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
dqs_1771	PWY-6289	petrobactin biosynthesis
dqs_1772	PWY-6902	chitin degradation II
dqs_1772	PWY-7822	dqs_1772
dqs_1772	PWY-7883	dqs_1772
dqs_1774	PWY-5269	cardiolipin biosynthesis II
dqs_1774	PWY-5668	cardiolipin biosynthesis I
dqs_1774	PWY-7817	dqs_1774
dqs_1811	PWY-5392	reductive TCA cycle II
dqs_1811	PWY-5537	pyruvate fermentation to acetate V
dqs_1811	PWY-5538	pyruvate fermentation to acetate VI
dqs_1811	PWY-5690	TCA cycle II (plants and fungi)
dqs_1811	PWY-5913	TCA cycle VI (obligate autotrophs)
dqs_1811	PWY-6728	methylaspartate cycle
dqs_1811	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
dqs_1811	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
dqs_1814	PWY-5350	thiosulfate disproportionation III (rhodanese)
dqs_1814	PWY-7927	dqs_1814
dqs_1815	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
dqs_1819	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
dqs_1819	PWY-6164	3-dehydroquinate biosynthesis I
dqs_1819	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
dqs_1832	PWY-7560	methylerythritol phosphate pathway II
dqs_1833	PWY-7560	methylerythritol phosphate pathway II
dqs_1837	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
dqs_1837	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
dqs_1837	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
dqs_1837	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
dqs_1873	PWY-7255	ergothioneine biosynthesis I (bacteria)
dqs_1873	PWY-7550	ergothioneine biosynthesis II (fungi)
dqs_1875	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
dqs_1875	PWY-622	starch biosynthesis
dqs_1875	PWY-7900	dqs_1875
dqs_1876	PWY-7900	dqs_1876
dqs_1877	PWY-2622	trehalose biosynthesis IV
dqs_1877	PWY-7900	dqs_1877
dqs_1894	PWY-6840	homoglutathione biosynthesis
dqs_1894	PWY-7255	ergothioneine biosynthesis I (bacteria)
dqs_1907	PWY-3781	aerobic respiration I (cytochrome c)
dqs_1907	PWY-4521	arsenite oxidation I (respiratory)
dqs_1907	PWY-6692	Fe(II) oxidation
dqs_1907	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
dqs_1945	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
dqs_1945	PWY-622	starch biosynthesis
dqs_1945	PWY-7900	dqs_1945
dqs_1946	PWY-622	starch biosynthesis
dqs_1946	PWY-7902	dqs_1946
dqs_1947	PWY-2661	trehalose biosynthesis V
dqs_1948	PWY-2661	trehalose biosynthesis V
dqs_1948	PWY-5941	glycogen degradation II (eukaryotic)
dqs_1948	PWY-6724	starch degradation II
dqs_1948	PWY-6737	starch degradation V
dqs_1948	PWY-7238	sucrose biosynthesis II
dqs_1949	PWY-2722	trehalose degradation IV
dqs_1949	PWY-2723	trehalose degradation V
dqs_1949	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
dqs_1949	PWY-5661	GDP-glucose biosynthesis
dqs_1949	PWY-621	sucrose degradation III (sucrose invertase)
dqs_1949	PWY-7238	sucrose biosynthesis II
dqs_1949	PWY-7385	1,3-propanediol biosynthesis (engineered)
dqs_1950	PWY-622	starch biosynthesis
dqs_1994	PWY-5419	catechol degradation to 2-oxopent-4-enoate II
dqs_1994	PWY-5641	2-nitrotoluene degradation
dqs_1995	PWY-5418	phenol degradation I (aerobic)
dqs_1995	PWY-6197	chlorinated phenols degradation
dqs_1999	PWY-5418	phenol degradation I (aerobic)
dqs_1999	PWY-6197	chlorinated phenols degradation
dqs_2007	PWY-5419	catechol degradation to 2-oxopent-4-enoate II
dqs_2007	PWY-5644	4-nitrotoluene degradation II
dqs_2007	PWY-5645	4-chloronitrobenzene degradation
dqs_2007	PWY-5647	2-nitrobenzoate degradation I
dqs_2007	PWY-5654	2-amino-3-carboxymuconate semialdehyde degradation to 2-oxopentenoate
dqs_2007	PWY-6210	2-aminophenol degradation
dqs_2007	PWY-6214	3-chlorocatechol degradation III (<i>meta</i> pathway)
dqs_2007	PWY-6336	protocatechuate degradation III (<I>para</I>-cleavage pathway)
dqs_2007	PWY-7006	4-amino-3-hydroxybenzoate degradation
dqs_2007	PWY-7009	2,2'-dihydroxybiphenyl degradation
dqs_2007	PWY-7480	2,3-dihydroxybenzoate degradation
dqs_2009	PWY-5162	2-oxopentenoate degradation
dqs_2009	PWY-5436	L-threonine degradation IV
dqs_2009	PWY-5480	pyruvate fermentation to ethanol I
dqs_2009	PWY-6587	pyruvate fermentation to ethanol III
dqs_2009	PWY-7085	triethylamine degradation
dqs_2009	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
dqs_2010	PWY-5162	2-oxopentenoate degradation
dqs_2011	PWY-5419	catechol degradation to 2-oxopent-4-enoate II
dqs_2011	PWY-5641	2-nitrotoluene degradation
dqs_2030	PWY-3221	dTDP-L-rhamnose biosynthesis II
dqs_2030	PWY-6808	dTDP-D-forosamine biosynthesis
dqs_2030	PWY-6942	dTDP-D-desosamine biosynthesis
dqs_2030	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
dqs_2030	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
dqs_2030	PWY-6974	dTDP-L-olivose biosynthesis
dqs_2030	PWY-6976	dTDP-L-mycarose biosynthesis
dqs_2030	PWY-7104	dTDP-L-megosamine biosynthesis
dqs_2030	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
dqs_2030	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
dqs_2030	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
dqs_2030	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
dqs_2030	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
dqs_2030	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
dqs_2030	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
dqs_2030	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
dqs_2030	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
dqs_2030	PWY-7688	dqs_2030
dqs_2030	PWY-7814	dqs_2030
dqs_2032	PWY-3221	dTDP-L-rhamnose biosynthesis II
dqs_2032	PWY-6808	dTDP-D-forosamine biosynthesis
dqs_2032	PWY-6942	dTDP-D-desosamine biosynthesis
dqs_2032	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
dqs_2032	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
dqs_2032	PWY-6974	dTDP-L-olivose biosynthesis
dqs_2032	PWY-6976	dTDP-L-mycarose biosynthesis
dqs_2032	PWY-7104	dTDP-L-megosamine biosynthesis
dqs_2032	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
dqs_2032	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
dqs_2032	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
dqs_2032	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
dqs_2032	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
dqs_2032	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
dqs_2032	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
dqs_2032	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
dqs_2032	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
dqs_2032	PWY-7688	dqs_2032
dqs_2032	PWY-7814	dqs_2032
dqs_2038	PWY-7072	hopanoid biosynthesis (bacteria)
dqs_2040	PWY-7072	hopanoid biosynthesis (bacteria)
dqs_2044	PWY-6519	8-amino-7-oxononanoate biosynthesis I
dqs_2044	PWY-6578	8-amino-7-oxononanoate biosynthesis III
dqs_2044	PWY-7147	8-amino-7-oxononanoate biosynthesis II
dqs_2046	PWY-6519	8-amino-7-oxononanoate biosynthesis I
dqs_2047	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
dqs_2053	PWY-5971	palmitate biosynthesis II (bacteria and plants)
dqs_2053	PWY-5973	<i>cis</i>-vaccenate biosynthesis
dqs_2053	PWY-5989	stearate biosynthesis II (bacteria and plants)
dqs_2053	PWY-5994	palmitate biosynthesis I (animals and fungi)
dqs_2053	PWY-6113	superpathway of mycolate biosynthesis
dqs_2053	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
dqs_2053	PWY-6519	8-amino-7-oxononanoate biosynthesis I
dqs_2053	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
dqs_2053	PWY-7663	gondoate biosynthesis (anaerobic)
dqs_2053	PWY-7664	oleate biosynthesis IV (anaerobic)
dqs_2053	PWY-7858	dqs_2053
dqs_2053	PWYG-321	mycolate biosynthesis
dqs_2058	PWY-7560	methylerythritol phosphate pathway II
dqs_2059	PWY-5667	CDP-diacylglycerol biosynthesis I
dqs_2059	PWY-5981	CDP-diacylglycerol biosynthesis III
dqs_2059	PWY-7817	dqs_2059
dqs_2065	PWY-7799	dqs_2065
dqs_2065	PWY-7800	dqs_2065
dqs_2097	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
dqs_2110	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
dqs_2111	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
dqs_2113	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
dqs_2113	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
dqs_2116	PWY-6550	carbazole degradation
dqs_2127	PWY-5162	2-oxopentenoate degradation
dqs_2128	PWY-5162	2-oxopentenoate degradation
dqs_2128	PWY-5436	L-threonine degradation IV
dqs_2128	PWY-5480	pyruvate fermentation to ethanol I
dqs_2128	PWY-6587	pyruvate fermentation to ethanol III
dqs_2128	PWY-7085	triethylamine degradation
dqs_2128	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
dqs_2130	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
dqs_2132	PWY-6550	carbazole degradation
dqs_2134	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
dqs_2134	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
dqs_2134	PWY-7717	dqs_2134
dqs_2134	PWY-7733	dqs_2134
dqs_2134	PWY-7734	dqs_2134
dqs_2134	PWY-7765	dqs_2134
dqs_2143	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
dqs_2143	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
dqs_2143	PWY-7717	dqs_2143
dqs_2143	PWY-7733	dqs_2143
dqs_2143	PWY-7734	dqs_2143
dqs_2143	PWY-7765	dqs_2143
dqs_2155	PWY-3801	sucrose degradation II (sucrose synthase)
dqs_2155	PWY-6527	stachyose degradation
dqs_2155	PWY-7238	sucrose biosynthesis II
dqs_2155	PWY-7343	UDP-glucose biosynthesis
dqs_2155	PWY-7817	dqs_2155
dqs_2171	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
dqs_2172	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
dqs_2174	PWY-6936	seleno-amino acid biosynthesis
dqs_2174	PWY-7274	D-cycloserine biosynthesis
dqs_2174	PWY-7870	dqs_2174
dqs_2176	PWY-2301	<i>myo</i>-inositol biosynthesis
dqs_2176	PWY-4702	phytate degradation I
dqs_2176	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
dqs_2183	PWY-5386	methylglyoxal degradation I
dqs_2193	PWY-4202	arsenate detoxification I (glutaredoxin)
dqs_2193	PWY-4621	arsenate detoxification II (glutaredoxin)
dqs_2205	PWY-6938	NADH repair
dqs_2208	PWY-5316	nicotine biosynthesis
dqs_2208	PWY-5381	pyridine nucleotide cycling (plants)
dqs_2208	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
dqs_2208	PWY-7342	superpathway of nicotine biosynthesis
dqs_2214	PWY-5659	GDP-mannose biosynthesis
dqs_2214	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
dqs_2262	PWY-5971	palmitate biosynthesis II (bacteria and plants)
dqs_2262	PWY-5973	<i>cis</i>-vaccenate biosynthesis
dqs_2262	PWY-5989	stearate biosynthesis II (bacteria and plants)
dqs_2262	PWY-6113	superpathway of mycolate biosynthesis
dqs_2262	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
dqs_2262	PWY-6519	8-amino-7-oxononanoate biosynthesis I
dqs_2262	PWY-7663	gondoate biosynthesis (anaerobic)
dqs_2262	PWY-7664	oleate biosynthesis IV (anaerobic)
dqs_2262	PWY-7858	dqs_2262
dqs_2262	PWYG-321	mycolate biosynthesis
dqs_2265	PWY-5663	tetrahydrobiopterin biosynthesis I
dqs_2265	PWY-5664	tetrahydrobiopterin biosynthesis II
dqs_2265	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
dqs_2265	PWY-6703	preQ<sub>0</sub> biosynthesis
dqs_2265	PWY-6983	tetrahydrobiopterin biosynthesis III
dqs_2265	PWY-7442	drosopterin and aurodrosopterin biosynthesis
dqs_2265	PWY-7852	dqs_2265
dqs_2277	PWY-1042	glycolysis IV (plant cytosol)
dqs_2277	PWY-1622	formaldehyde assimilation I (serine pathway)
dqs_2277	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
dqs_2277	PWY-5484	glycolysis II (from fructose 6-phosphate)
dqs_2277	PWY-5723	Rubisco shunt
dqs_2277	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
dqs_2277	PWY-6886	1-butanol autotrophic biosynthesis
dqs_2277	PWY-6901	superpathway of glucose and xylose degradation
dqs_2277	PWY-7003	glycerol degradation to butanol
dqs_2277	PWY-7124	ethylene biosynthesis V (engineered)
dqs_2277	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
dqs_2278	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
dqs_2278	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
dqs_2279	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
dqs_2279	PWY-7177	UTP and CTP dephosphorylation II
dqs_2279	PWY-7185	UTP and CTP dephosphorylation I
dqs_2282	PWY-5108	L-isoleucine biosynthesis V
dqs_2282	PWY-5132	humulone biosynthesis
dqs_2282	PWY-5133	cohumulone biosynthesis
dqs_2282	PWY-6672	<i>cis</i>-genanyl-CoA degradation
dqs_2282	PWY-7118	chitin degradation to ethanol
dqs_2282	PWY-7857	dqs_2282
dqs_2291	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
dqs_2291	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
dqs_2291	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
dqs_2300	PWY-5484	glycolysis II (from fructose 6-phosphate)
dqs_2300	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
dqs_2317	PWY-5532	adenosine nucleotides degradation IV
dqs_2317	PWY-7181	pyrimidine deoxyribonucleosides degradation
dqs_2319	PWY-4983	L-citrulline-nitric oxide cycle
dqs_2319	PWY-4984	urea cycle
dqs_2319	PWY-5	canavanine biosynthesis
dqs_2319	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
dqs_2319	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
dqs_2320	PWY-4981	L-proline biosynthesis II (from arginine)
dqs_2320	PWY-4984	urea cycle
dqs_2320	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
dqs_2341	PWY-7801	dqs_2341
dqs_2342	PWY-7802	dqs_2342
dqs_2343	PWY-5686	UMP biosynthesis
dqs_2344	PWY-5497	purine nucleobases degradation II (anaerobic)
dqs_2344	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
dqs_2344	PWY-6538	caffeine degradation III (bacteria, via demethylation)
dqs_2344	PWY-6596	adenosine nucleotides degradation I
dqs_2344	PWY-6606	guanosine nucleotides degradation II
dqs_2344	PWY-6607	guanosine nucleotides degradation I
dqs_2344	PWY-6608	guanosine nucleotides degradation III
dqs_2344	PWY-6999	theophylline degradation
dqs_2345	PWY-5497	purine nucleobases degradation II (anaerobic)
dqs_2345	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
dqs_2345	PWY-6538	caffeine degradation III (bacteria, via demethylation)
dqs_2345	PWY-6596	adenosine nucleotides degradation I
dqs_2345	PWY-6606	guanosine nucleotides degradation II
dqs_2345	PWY-6607	guanosine nucleotides degradation I
dqs_2345	PWY-6608	guanosine nucleotides degradation III
dqs_2345	PWY-6999	theophylline degradation
dqs_2356	PWY-5497	purine nucleobases degradation II (anaerobic)
dqs_2356	PWY-6606	guanosine nucleotides degradation II
dqs_2356	PWY-6608	guanosine nucleotides degradation III
dqs_2356	PWY-7442	drosopterin and aurodrosopterin biosynthesis
dqs_2365	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
dqs_2365	PWY-7820	dqs_2365
dqs_2379	PWY-6655	xanthan biosynthesis
dqs_2379	PWY-6658	acetan biosynthesis
dqs_2388	PWY-6967	methylamine degradation I
dqs_2391	PWY-6967	methylamine degradation I
dqs_2408	PWY-6840	homoglutathione biosynthesis
dqs_2408	PWY-7255	ergothioneine biosynthesis I (bacteria)
dqs_2429	PWY-7158	L-phenylalanine degradation V
dqs_2443	PWY-2722	trehalose degradation IV
dqs_2443	PWY-2723	trehalose degradation V
dqs_2443	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
dqs_2443	PWY-5661	GDP-glucose biosynthesis
dqs_2443	PWY-621	sucrose degradation III (sucrose invertase)
dqs_2443	PWY-7238	sucrose biosynthesis II
dqs_2443	PWY-7385	1,3-propanediol biosynthesis (engineered)
dqs_2486	PWY-4621	arsenate detoxification II (glutaredoxin)
dqs_2487	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
dqs_2502	PWY-5350	thiosulfate disproportionation III (rhodanese)
dqs_2502	PWY-7927	dqs_2502
dqs_2504	PWY-6012	acyl carrier protein metabolism I
dqs_2515	PWY-5331	taurine biosynthesis
dqs_2516	PWY-6654	phosphopantothenate biosynthesis III
dqs_2543	PWY-6936	seleno-amino acid biosynthesis
dqs_2558	PWY-5108	L-isoleucine biosynthesis V
dqs_2558	PWY-5132	humulone biosynthesis
dqs_2558	PWY-5133	cohumulone biosynthesis
dqs_2558	PWY-6672	<i>cis</i>-genanyl-CoA degradation
dqs_2558	PWY-7118	chitin degradation to ethanol
dqs_2558	PWY-7857	dqs_2558
dqs_2559	PWY-5392	reductive TCA cycle II
dqs_2559	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
dqs_2559	PWY-5690	TCA cycle II (plants and fungi)
dqs_2559	PWY-5913	TCA cycle VI (obligate autotrophs)
dqs_2559	PWY-6728	methylaspartate cycle
dqs_2559	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
dqs_2559	PWY-7254	TCA cycle VII (acetate-producers)
dqs_2559	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
dqs_2574	PWY-5419	catechol degradation to 2-oxopent-4-enoate II
dqs_2574	PWY-5644	4-nitrotoluene degradation II
dqs_2574	PWY-5645	4-chloronitrobenzene degradation
dqs_2574	PWY-5647	2-nitrobenzoate degradation I
dqs_2574	PWY-5654	2-amino-3-carboxymuconate semialdehyde degradation to 2-oxopentenoate
dqs_2574	PWY-6210	2-aminophenol degradation
dqs_2574	PWY-6214	3-chlorocatechol degradation III (<i>meta</i> pathway)
dqs_2574	PWY-6336	protocatechuate degradation III (<I>para</I>-cleavage pathway)
dqs_2574	PWY-7006	4-amino-3-hydroxybenzoate degradation
dqs_2574	PWY-7009	2,2'-dihydroxybiphenyl degradation
dqs_2574	PWY-7480	2,3-dihydroxybenzoate degradation
dqs_2575	PWY-5162	2-oxopentenoate degradation
dqs_2576	PWY-5162	2-oxopentenoate degradation
dqs_2576	PWY-5436	L-threonine degradation IV
dqs_2576	PWY-5480	pyruvate fermentation to ethanol I
dqs_2576	PWY-6587	pyruvate fermentation to ethanol III
dqs_2576	PWY-7085	triethylamine degradation
dqs_2576	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
dqs_2582	PWY-5419	catechol degradation to 2-oxopent-4-enoate II
dqs_2582	PWY-5641	2-nitrotoluene degradation
dqs_2584	PWY-5418	phenol degradation I (aerobic)
dqs_2584	PWY-6197	chlorinated phenols degradation
dqs_2588	PWY-5418	phenol degradation I (aerobic)
dqs_2588	PWY-6197	chlorinated phenols degradation
dqs_2615	PWY-6654	phosphopantothenate biosynthesis III
dqs_2695	PWY-6216	3-chlorobenzoate degradation II (via protocatechuate)
dqs_2695	PWY-6217	3,4-dichlorobenzoate degradation
dqs_2698	PWY-7701	dqs_2698
dqs_2737	PWY-2941	L-lysine biosynthesis II
dqs_2737	PWY-2942	L-lysine biosynthesis III
dqs_2737	PWY-5097	L-lysine biosynthesis VI
dqs_2741	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
dqs_2741	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
dqs_2741	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
dqs_2749	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
dqs_2749	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
dqs_2749	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
dqs_2749	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
dqs_2749	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
dqs_2749	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
dqs_2749	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
dqs_2749	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
dqs_2749	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
dqs_2749	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
dqs_2774	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
dqs_2833	PWY-5757	fosfomycin biosynthesis
dqs_2833	PWY-6322	phosphinothricin tripeptide biosynthesis
dqs_2833	PWY-6682	dehydrophos biosynthesis
dqs_2833	PWY-6839	2-aminoethylphosphonate biosynthesis
dqs_2833	PWY-7419	FR-900098 and FR-33289 antibiotics biosynthesis
dqs_2833	PWY-7510	rhizocticin A and B biosynthesis
dqs_2833	PWY-7769	dqs_2833
dqs_2834	PWY-5757	fosfomycin biosynthesis
dqs_2834	PWY-6322	phosphinothricin tripeptide biosynthesis
dqs_2834	PWY-6682	dehydrophos biosynthesis
dqs_2834	PWY-6839	2-aminoethylphosphonate biosynthesis
dqs_2834	PWY-7510	rhizocticin A and B biosynthesis
dqs_2834	PWY-7769	dqs_2834
dqs_2838	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
dqs_2854	PWY-7980	dqs_2854
dqs_2885	PWY-4261	glycerol degradation I
dqs_2885	PWY-6118	glycerol-3-phosphate shuttle
dqs_2885	PWY-6952	glycerophosphodiester degradation
dqs_2886	PWY-4261	glycerol degradation I
dqs_2889	PWY-5350	thiosulfate disproportionation III (rhodanese)
dqs_2889	PWY-7927	dqs_2889
dqs_2890	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
dqs_2890	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
dqs_2907	PWY-7887	dqs_2907
dqs_2907	PWY-7892	dqs_2907
dqs_2910	PWY-5057	L-valine degradation II
dqs_2910	PWY-5076	L-leucine degradation III
dqs_2910	PWY-5078	L-isoleucine degradation II
dqs_2910	PWY-5101	L-isoleucine biosynthesis II
dqs_2910	PWY-5103	L-isoleucine biosynthesis III
dqs_2910	PWY-5104	L-isoleucine biosynthesis IV
dqs_2910	PWY-5108	L-isoleucine biosynthesis V
dqs_2910	PWY-7767	dqs_2910
dqs_2913	PWY-6749	CMP-legionaminate biosynthesis I
dqs_2923	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
dqs_2923	PWY-6164	3-dehydroquinate biosynthesis I
dqs_2923	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
dqs_2940	PWY-1622	formaldehyde assimilation I (serine pathway)
dqs_2940	PWY-181	photorespiration
dqs_2940	PWY-2161	folate polyglutamylation
dqs_2940	PWY-2201	folate transformations I
dqs_2940	PWY-3661	glycine betaine degradation I
dqs_2940	PWY-3661-1	glycine betaine degradation II (mammalian)
dqs_2940	PWY-3841	folate transformations II
dqs_2940	PWY-5497	purine nucleobases degradation II (anaerobic)
dqs_2942	PWY-7991	dqs_2942
dqs_2947	PWY-1622	formaldehyde assimilation I (serine pathway)
dqs_2947	PWY-5484	glycolysis II (from fructose 6-phosphate)
dqs_2953	PWY-5667	CDP-diacylglycerol biosynthesis I
dqs_2953	PWY-5981	CDP-diacylglycerol biosynthesis III
dqs_2953	PWY-7902	dqs_2953
dqs_2956	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
dqs_2957	PWY-6519	8-amino-7-oxononanoate biosynthesis I
dqs_2960	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
dqs_2960	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
dqs_2964	PWY-6823	molybdenum cofactor biosynthesis
dqs_2965	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
dqs_2965	PWY-5723	Rubisco shunt
dqs_2969	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
dqs_2974	PWY-5723	Rubisco shunt
dqs_2975	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
dqs_2975	PWY-5723	Rubisco shunt
dqs_2975	PWY-6891	thiazole biosynthesis II (Bacillus)
dqs_2975	PWY-6892	thiazole biosynthesis I (E. coli)
dqs_2975	PWY-6901	superpathway of glucose and xylose degradation
dqs_2975	PWY-7560	methylerythritol phosphate pathway II
dqs_2976	PWY-1042	glycolysis IV (plant cytosol)
dqs_2976	PWY-5484	glycolysis II (from fructose 6-phosphate)
dqs_2976	PWY-6901	superpathway of glucose and xylose degradation
dqs_2976	PWY-7003	glycerol degradation to butanol
dqs_2978	PWY-1042	glycolysis IV (plant cytosol)
dqs_2978	PWY-5484	glycolysis II (from fructose 6-phosphate)
dqs_2978	PWY-6886	1-butanol autotrophic biosynthesis
dqs_2978	PWY-6901	superpathway of glucose and xylose degradation
dqs_2978	PWY-7003	glycerol degradation to butanol
dqs_2981	PWY-1042	glycolysis IV (plant cytosol)
dqs_2981	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
dqs_2981	PWY-5484	glycolysis II (from fructose 6-phosphate)
dqs_2981	PWY-5723	Rubisco shunt
dqs_2981	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
dqs_2981	PWY-6886	1-butanol autotrophic biosynthesis
dqs_2981	PWY-6901	superpathway of glucose and xylose degradation
dqs_2981	PWY-7003	glycerol degradation to butanol
dqs_2981	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
dqs_2981	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
dqs_2982	PWY-1042	glycolysis IV (plant cytosol)
dqs_2982	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
dqs_2982	PWY-5484	glycolysis II (from fructose 6-phosphate)
dqs_2982	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
dqs_2982	PWY-7385	1,3-propanediol biosynthesis (engineered)
dqs_3012	PWY-6123	inosine-5'-phosphate biosynthesis I
dqs_3012	PWY-6124	inosine-5'-phosphate biosynthesis II
dqs_3012	PWY-7234	inosine-5'-phosphate biosynthesis III
dqs_3030	PWY-7799	dqs_3030
dqs_3030	PWY-7800	dqs_3030
dqs_3034	PWY-6123	inosine-5'-phosphate biosynthesis I
dqs_3034	PWY-6124	inosine-5'-phosphate biosynthesis II
dqs_3034	PWY-7234	inosine-5'-phosphate biosynthesis III
dqs_3035	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
dqs_3035	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
dqs_3035	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
dqs_3036	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
dqs_3040	PWY-6829	tRNA methylation (yeast)
dqs_3040	PWY-7285	methylwyosine biosynthesis
dqs_3040	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
dqs_3061	PWY-6823	molybdenum cofactor biosynthesis
dqs_3103	PWY-7731	dqs_3103
dqs_3125	PWY-5506	methanol oxidation to formaldehyde IV
dqs_3146	PWY-381	nitrate reduction II (assimilatory)
dqs_3146	PWY-5675	nitrate reduction V (assimilatory)
dqs_3146	PWY-6549	L-glutamine biosynthesis III
dqs_3146	PWY-6963	ammonia assimilation cycle I
dqs_3146	PWY-6964	ammonia assimilation cycle II
dqs_3172	PWY-1881	formate oxidation to CO<sub>2</sub>
dqs_3172	PWY-5497	purine nucleobases degradation II (anaerobic)
dqs_3172	PWY-6696	oxalate degradation III
dqs_3172	PWY-7985	dqs_3172
dqs_3174	PWY-1361	benzoyl-CoA degradation I (aerobic)
dqs_3174	PWY-5109	2-methylbutanoate biosynthesis
dqs_3174	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
dqs_3174	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
dqs_3174	PWY-5177	glutaryl-CoA degradation
dqs_3174	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
dqs_3174	PWY-6435	4-hydroxybenzoate biosynthesis V
dqs_3174	PWY-6583	pyruvate fermentation to butanol I
dqs_3174	PWY-6863	pyruvate fermentation to hexanol
dqs_3174	PWY-6883	pyruvate fermentation to butanol II
dqs_3174	PWY-6944	androstenedione degradation
dqs_3174	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
dqs_3174	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
dqs_3174	PWY-7007	methyl ketone biosynthesis
dqs_3174	PWY-7046	4-coumarate degradation (anaerobic)
dqs_3174	PWY-7094	fatty acid salvage
dqs_3174	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
dqs_3174	PWY-735	jasmonic acid biosynthesis
dqs_3174	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
dqs_3174	PWY-7606	docosahexaenoate biosynthesis III (mammals)
dqs_3174	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
dqs_3174	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
dqs_3174	PWY-7726	dqs_3174
dqs_3174	PWY-7778	dqs_3174
dqs_3174	PWY-7779	dqs_3174
dqs_3189	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
dqs_3190	PWY-1361	benzoyl-CoA degradation I (aerobic)
dqs_3191	PWY-1361	benzoyl-CoA degradation I (aerobic)
dqs_3192	PWY-101	photosynthesis light reactions
dqs_3192	PWY-1361	benzoyl-CoA degradation I (aerobic)
dqs_3193	PWY-1361	benzoyl-CoA degradation I (aerobic)
dqs_3193	PWY-2361	3-oxoadipate degradation
dqs_3193	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
dqs_3204	PWY-4381	fatty acid biosynthesis initiation I
dqs_3204	PWY-5743	3-hydroxypropanoate cycle
dqs_3204	PWY-5744	glyoxylate assimilation
dqs_3204	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
dqs_3204	PWY-6722	candicidin biosynthesis
dqs_3224	PWY-3781	aerobic respiration I (cytochrome c)
dqs_3224	PWY-4521	arsenite oxidation I (respiratory)
dqs_3224	PWY-6692	Fe(II) oxidation
dqs_3224	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
dqs_3244	PWY-6748	nitrate reduction VII (denitrification)
dqs_3244	PWY-7084	nitrifier denitrification
dqs_3247	PWY-2941	L-lysine biosynthesis II
dqs_3247	PWY-2942	L-lysine biosynthesis III
dqs_3247	PWY-5097	L-lysine biosynthesis VI
dqs_3247	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
dqs_3247	PWY-6559	spermidine biosynthesis II
dqs_3247	PWY-6562	norspermidine biosynthesis
dqs_3247	PWY-7153	grixazone biosynthesis
dqs_3247	PWY-7977	dqs_3247
dqs_3256	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
dqs_3256	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
dqs_3263	PWY-2781	<i>cis</i>-zeatin biosynthesis
dqs_3268	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
dqs_3268	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
dqs_3268	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
dqs_3273	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
dqs_3273	PWY-6148	tetrahydromethanopterin biosynthesis
dqs_3273	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
dqs_3273	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
dqs_3273	PWY-7852	dqs_3273
dqs_3273	PWY-7853	dqs_3273
dqs_3276	PWY-6654	phosphopantothenate biosynthesis III
dqs_3286	PWY-5101	L-isoleucine biosynthesis II
dqs_3286	PWY-5103	L-isoleucine biosynthesis III
dqs_3286	PWY-5104	L-isoleucine biosynthesis IV
dqs_3286	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
dqs_3286	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
dqs_3286	PWY-6389	(<i>S</i>)-acetoin biosynthesis
dqs_3286	PWY-7111	pyruvate fermentation to isobutanol (engineered)
dqs_3287	PWY-5101	L-isoleucine biosynthesis II
dqs_3287	PWY-5103	L-isoleucine biosynthesis III
dqs_3287	PWY-5104	L-isoleucine biosynthesis IV
dqs_3287	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
dqs_3287	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
dqs_3287	PWY-6389	(<i>S</i>)-acetoin biosynthesis
dqs_3287	PWY-7111	pyruvate fermentation to isobutanol (engineered)
dqs_3288	PWY-5103	L-isoleucine biosynthesis III
dqs_3288	PWY-7111	pyruvate fermentation to isobutanol (engineered)
dqs_3289	PWY-5669	phosphatidylethanolamine biosynthesis I
dqs_3294	PWY-6871	3-methylbutanol biosynthesis
dqs_3296	PWY-7731	dqs_3296
dqs_3302	PWY-3341	L-proline biosynthesis III
dqs_3302	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
dqs_3306	PWY-5839	menaquinol-7 biosynthesis
dqs_3306	PWY-5844	menaquinol-9 biosynthesis
dqs_3306	PWY-5849	menaquinol-6 biosynthesis
dqs_3306	PWY-5890	menaquinol-10 biosynthesis
dqs_3306	PWY-5891	menaquinol-11 biosynthesis
dqs_3306	PWY-5892	menaquinol-12 biosynthesis
dqs_3306	PWY-5895	menaquinol-13 biosynthesis
dqs_3311	PWY-3941	&beta;-alanine biosynthesis II
dqs_3311	PWY-5104	L-isoleucine biosynthesis IV
dqs_3311	PWY-5108	L-isoleucine biosynthesis V
dqs_3311	PWY-5132	humulone biosynthesis
dqs_3311	PWY-5133	cohumulone biosynthesis
dqs_3311	PWY-5747	2-methylcitrate cycle II
dqs_3311	PWY-6672	<i>cis</i>-genanyl-CoA degradation
dqs_3311	PWY-7118	chitin degradation to ethanol
dqs_3311	PWY-7857	dqs_3311
dqs_3334	PWY-3841	folate transformations II
dqs_3334	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
dqs_3334	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
dqs_3334	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
dqs_3334	PWY-7199	pyrimidine deoxyribonucleosides salvage
dqs_3334	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
dqs_3335	PWY-3841	folate transformations II
dqs_3335	PWY-6614	tetrahydrofolate biosynthesis
dqs_3347	PWY-6803	phosphatidylcholine acyl editing
dqs_3347	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
dqs_3347	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
dqs_3347	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
dqs_3347	PWY-7783	dqs_3347
dqs_3348	PWY-1281	sulfoacetaldehyde degradation I
dqs_3348	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
dqs_3348	PWY-5482	pyruvate fermentation to acetate II
dqs_3348	PWY-5485	pyruvate fermentation to acetate IV
dqs_3348	PWY-5497	purine nucleobases degradation II (anaerobic)
dqs_3348	PWY-6637	sulfolactate degradation II
dqs_3348	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
dqs_3355	PWY-3341	L-proline biosynthesis III
dqs_3355	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
dqs_3359	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
dqs_3359	PWY-6148	tetrahydromethanopterin biosynthesis
dqs_3359	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
dqs_3359	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
dqs_3365	PWY-5386	methylglyoxal degradation I
dqs_3381	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
dqs_3381	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
dqs_3408	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
dqs_3408	PWY-7820	dqs_3408
dqs_3415	PWY-6519	8-amino-7-oxononanoate biosynthesis I
dqs_3415	PWY-6578	8-amino-7-oxononanoate biosynthesis III
dqs_3415	PWY-7147	8-amino-7-oxononanoate biosynthesis II
dqs_3441	PWY-3781	aerobic respiration I (cytochrome c)
dqs_3441	PWY-4521	arsenite oxidation I (respiratory)
dqs_3441	PWY-6692	Fe(II) oxidation
dqs_3441	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
dqs_3462	PWY-5958	acridone alkaloid biosynthesis
dqs_3462	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
dqs_3462	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
dqs_3463	PWY-5958	acridone alkaloid biosynthesis
dqs_3463	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
dqs_3463	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
dqs_3464	PWY-181	photorespiration
dqs_3465	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
dqs_3465	PWY-5723	Rubisco shunt
dqs_3470	PWY-5392	reductive TCA cycle II
dqs_3470	PWY-5537	pyruvate fermentation to acetate V
dqs_3470	PWY-5538	pyruvate fermentation to acetate VI
dqs_3470	PWY-5690	TCA cycle II (plants and fungi)
dqs_3470	PWY-5913	TCA cycle VI (obligate autotrophs)
dqs_3470	PWY-6728	methylaspartate cycle
dqs_3470	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
dqs_3470	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
dqs_3471	PWY-5392	reductive TCA cycle II
dqs_3471	PWY-5537	pyruvate fermentation to acetate V
dqs_3471	PWY-5538	pyruvate fermentation to acetate VI
dqs_3471	PWY-5690	TCA cycle II (plants and fungi)
dqs_3471	PWY-5913	TCA cycle VI (obligate autotrophs)
dqs_3471	PWY-6728	methylaspartate cycle
dqs_3471	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
dqs_3471	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
dqs_3489	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
dqs_3499	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
dqs_3499	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
dqs_3504	PWY-5381	pyridine nucleotide cycling (plants)
dqs_3516	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
dqs_3528	PWY-3821	galactose degradation III
dqs_3528	PWY-6317	galactose degradation I (Leloir pathway)
dqs_3528	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
dqs_3528	PWY-6527	stachyose degradation
dqs_3528	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
dqs_3528	PWY-7344	UDP-D-galactose biosynthesis
dqs_3592	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
dqs_3593	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
dqs_3593	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
dqs_3593	PWY-6897	thiamin salvage II
dqs_3593	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
dqs_3593	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
dqs_3593	PWY-7356	thiamin salvage IV (yeast)
dqs_3593	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
dqs_3605	PWY-5686	UMP biosynthesis
dqs_3605	PWY-7790	dqs_3605
dqs_3605	PWY-7791	dqs_3605
dqs_3609	PWY-3341	L-proline biosynthesis III
dqs_3609	PWY-4981	L-proline biosynthesis II (from arginine)
dqs_3609	PWY-6344	L-ornithine degradation II (Stickland reaction)
dqs_3610	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
dqs_3632	PWY-5964	guanylyl molybdenum cofactor biosynthesis
dqs_3632	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
dqs_3647	PWY-5704	urea degradation II
dqs_3648	PWY-5704	urea degradation II
dqs_3650	PWY-5704	urea degradation II
dqs_3652	PWY-6700	queuosine biosynthesis
dqs_3662	PWY-5443	aminopropanol phosphate biosynthesis I
dqs_3666	PWY-6871	3-methylbutanol biosynthesis
dqs_3667	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
dqs_3672	PWY-5194	siroheme biosynthesis
dqs_3672	PWY-5196	factor 430 biosynthesis
dqs_3672	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
dqs_3673	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
dqs_3675	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
dqs_3676	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
dqs_3678	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
dqs_3692	PWY-5669	phosphatidylethanolamine biosynthesis I
dqs_3694	PWY-5194	siroheme biosynthesis
dqs_3694	PWY-5196	factor 430 biosynthesis
dqs_3694	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
dqs_3700	PWY-6269	adenosylcobalamin salvage from cobinamide II
dqs_3700	PWY-7962	dqs_3700
dqs_3700	PWY-7971	dqs_3700
dqs_3700	PWY-7972	dqs_3700
dqs_3703	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
dqs_3703	PWY-6269	adenosylcobalamin salvage from cobinamide II
dqs_3703	PWY-7964	dqs_3703
dqs_3703	PWY-7965	dqs_3703
dqs_3703	PWY-7966	dqs_3703
dqs_3703	PWY-7967	dqs_3703
dqs_3703	PWY-7968	dqs_3703
dqs_3703	PWY-7969	dqs_3703
dqs_3703	PWY-7970	dqs_3703
dqs_3704	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
dqs_3704	PWY-6269	adenosylcobalamin salvage from cobinamide II
dqs_3704	PWY-7961	dqs_3704
dqs_3704	PWY-7963	dqs_3704
dqs_3704	PWY-7964	dqs_3704
dqs_3704	PWY-7965	dqs_3704
dqs_3704	PWY-7966	dqs_3704
dqs_3704	PWY-7967	dqs_3704
dqs_3704	PWY-7968	dqs_3704
dqs_3704	PWY-7969	dqs_3704
dqs_3704	PWY-7970	dqs_3704
dqs_3704	PWY-7975	dqs_3704
dqs_3725	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
dqs_3725	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
dqs_3725	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
dqs_3729	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
dqs_3730	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
dqs_3730	PWY-5739	GDP-D-perosamine biosynthesis
dqs_3730	PWY-5740	GDP-L-colitose biosynthesis
dqs_3730	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
dqs_3730	PWY-7573	GDP-mycosamine biosynthesis
dqs_3742	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
dqs_3747	PWY-702	L-methionine biosynthesis II
dqs_3750	PWY-5381	pyridine nucleotide cycling (plants)
dqs_3750	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
dqs_3750	PWY-7761	dqs_3750
dqs_3766	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
dqs_3766	PWY-3162	L-tryptophan degradation V (side chain pathway)
dqs_3766	PWY-5057	L-valine degradation II
dqs_3766	PWY-5076	L-leucine degradation III
dqs_3766	PWY-5078	L-isoleucine degradation II
dqs_3766	PWY-5079	L-phenylalanine degradation III
dqs_3766	PWY-5082	L-methionine degradation III
dqs_3766	PWY-5480	pyruvate fermentation to ethanol I
dqs_3766	PWY-5486	pyruvate fermentation to ethanol II
dqs_3766	PWY-5751	phenylethanol biosynthesis
dqs_3766	PWY-6313	serotonin degradation
dqs_3766	PWY-6333	acetaldehyde biosynthesis I
dqs_3766	PWY-6342	noradrenaline and adrenaline degradation
dqs_3766	PWY-6587	pyruvate fermentation to ethanol III
dqs_3766	PWY-6802	salidroside biosynthesis
dqs_3766	PWY-6871	3-methylbutanol biosynthesis
dqs_3766	PWY-7013	L-1,2-propanediol degradation
dqs_3766	PWY-7111	pyruvate fermentation to isobutanol (engineered)
dqs_3766	PWY-7118	chitin degradation to ethanol
dqs_3766	PWY-7396	butanol and isobutanol biosynthesis (engineered)
dqs_3766	PWY-7798	dqs_3766
dqs_3767	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
dqs_3781	PWY-6749	CMP-legionaminate biosynthesis I
dqs_3782	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
dqs_3783	PWY-1281	sulfoacetaldehyde degradation I
dqs_3783	PWY-5482	pyruvate fermentation to acetate II
dqs_3783	PWY-5485	pyruvate fermentation to acetate IV
dqs_3783	PWY-5497	purine nucleobases degradation II (anaerobic)
dqs_3783	PWY-6637	sulfolactate degradation II
dqs_3784	PWY-5482	pyruvate fermentation to acetate II
dqs_3784	PWY-5485	pyruvate fermentation to acetate IV
dqs_3784	PWY-5497	purine nucleobases degradation II (anaerobic)
dqs_3789	PWY-6164	3-dehydroquinate biosynthesis I
dqs_3790	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
dqs_3796	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
dqs_3796	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
dqs_3796	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
dqs_3796	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
dqs_3799	PWY-2941	L-lysine biosynthesis II
dqs_3799	PWY-2942	L-lysine biosynthesis III
dqs_3799	PWY-5097	L-lysine biosynthesis VI
dqs_3801	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
dqs_3801	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
dqs_3803	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
dqs_3803	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
dqs_3803	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
dqs_3803	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
dqs_3803	PWY-6978	plastoquinol-9 biosynthesis II
dqs_3804	PWY-5686	UMP biosynthesis
dqs_3804	PWY-7790	dqs_3804
dqs_3804	PWY-7791	dqs_3804
dqs_3808	PWY-5686	UMP biosynthesis
dqs_3808	PWY-7790	dqs_3808
dqs_3808	PWY-7791	dqs_3808
dqs_3833	PWY-5692	allantoin degradation to glyoxylate II
dqs_3833	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
dqs_3834	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
dqs_3834	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
dqs_3834	PWY-7953	dqs_3834
dqs_3848	PWY-6825	phosphatidylcholine biosynthesis V
dqs_3877	PWY-2201	folate transformations I
dqs_3877	PWY-3841	folate transformations II
dqs_3877	PWY-7977	dqs_3877
dqs_3893	PWY-2201	folate transformations I
dqs_3893	PWY-5497	purine nucleobases degradation II (anaerobic)
dqs_3893	PWY-7909	dqs_3893
dqs_3904	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
dqs_3904	PWY-6853	ethylene biosynthesis II (microbes)
dqs_3904	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
dqs_3916	PWY-6168	flavin biosynthesis III (fungi)
dqs_3916	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
dqs_3916	PWY-7991	dqs_3916
dqs_3918	PWY-7183	pyrimidine nucleobases salvage I
dqs_3973	PWY-723	alkylnitronates degradation
dqs_3999	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
dqs_3999	PWY-5491	diethylphosphate degradation
dqs_4060	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
dqs_4060	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
dqs_4069	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
dqs_4085	PWY-5674	nitrate reduction IV (dissimilatory)
dqs_4092	PWY-5839	menaquinol-7 biosynthesis
dqs_4092	PWY-5844	menaquinol-9 biosynthesis
dqs_4092	PWY-5849	menaquinol-6 biosynthesis
dqs_4092	PWY-5890	menaquinol-10 biosynthesis
dqs_4092	PWY-5891	menaquinol-11 biosynthesis
dqs_4092	PWY-5892	menaquinol-12 biosynthesis
dqs_4092	PWY-5895	menaquinol-13 biosynthesis
dqs_4096	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
dqs_4112	PWY-6891	thiazole biosynthesis II (Bacillus)
dqs_4112	PWY-6892	thiazole biosynthesis I (E. coli)
dqs_4115	PWY-5344	L-homocysteine biosynthesis
dqs_4120	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
dqs_4120	PWY-5743	3-hydroxypropanoate cycle
dqs_4120	PWY-5744	glyoxylate assimilation
dqs_4120	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
dqs_4120	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
dqs_4120	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
dqs_4120	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
dqs_4122	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
dqs_4122	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
dqs_4122	PWY-7766	dqs_4122
