locus-tag	class	description
CJ010_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CJ010_00020	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CJ010_00050	COG0564	pseudouridine synthase activity
CJ010_00075	COG0693	protein deglycase activity
CJ010_00085	COG0583	DNA-binding transcription factor activity
CJ010_00100	COG3608	succinylglutamate desuccinylase aspartoacylase
CJ010_00100	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
CJ010_00110	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CJ010_00120	COG0861	Integral membrane protein TerC family
CJ010_00125	COG0583	DNA-binding transcription factor activity
CJ010_00130	COG0477	Major facilitator Superfamily
CJ010_00175	COG4977	sequence-specific DNA binding
CJ010_00175	COG1917	Cupin 2, conserved barrel domain protein
CJ010_00215	COG4336	lyase activity
CJ010_00220	COG0583	DNA-binding transcription factor activity
CJ010_00225	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CJ010_00230	COG1984	allophanate hydrolase subunit 2
CJ010_00235	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CJ010_00245	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CJ010_00260	COG0596	Alpha beta hydrolase
CJ010_00265	COG4676	Protein conserved in bacteria
CJ010_00270	COG4676	Protein conserved in bacteria
CJ010_00275	COG5445	Predicted secreted protein (DUF2300)
CJ010_00300	COG1136	(ABC) transporter
CJ010_00305	COG0577	efflux transmembrane transporter activity
CJ010_00335	COG1091	dTDP-4-dehydrorhamnose reductase activity
CJ010_00350	COG2373	Large extracellular alpha-helical protein
CJ010_00360	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
CJ010_00380	COG0628	permease
CJ010_00390	COG1024	Enoyl-CoA hydratase
CJ010_00420	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CJ010_00435	COG2974	May be involved in recombination
CJ010_00445	COG1187	pseudouridine synthase activity
CJ010_00455	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CJ010_00465	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CJ010_00475	COG3909	cytochrome
CJ010_00480	COG0840	transmembrane signaling receptor activity
CJ010_00485	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CJ010_00490	COG4206	TonB-dependent receptor
CJ010_00500	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CJ010_00500	COG0551	DNA topoisomerase type I activity
CJ010_00505	COG2922	Belongs to the Smg family
CJ010_00510	COG0758	DNA mediated transformation
CJ010_00520	COG0242	peptide deformylase activity
CJ010_00525	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CJ010_00530	COG0501	Belongs to the peptidase M48B family
CJ010_00535	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJ010_00540	COG1305	Transglutaminase-like
CJ010_00570	COG1490	D-aminoacyl-tRNA deacylase activity
CJ010_00575	COG1741	Belongs to the pirin family
CJ010_00585	COG0583	DNA-binding transcription factor activity
CJ010_00590	COG0625	glutathione transferase activity
CJ010_00600	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CJ010_00665	COG3409	Peptidoglycan-binding domain 1 protein
CJ010_00665	COG3267	Type II secretory pathway component ExeA
CJ010_00720	COG3023	N-Acetylmuramoyl-L-alanine amidase
CJ010_00765	COG4373	Mu-like prophage FluMu protein gp28
CJ010_00920	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CJ010_00935	COG0583	DNA-binding transcription factor activity
CJ010_00950	COG0583	DNA-binding transcription factor activity
CJ010_00965	COG3706	GGDEF domain
CJ010_01005	COG0445	tRNA wobble uridine modification
CJ010_01010	COG0357	Ribosomal RNA small subunit methyltransferase G
CJ010_01015	COG1192	Involved in chromosome partitioning
CJ010_01020	COG1475	DNA binding
CJ010_01040	COG0318	PFAM AMP-dependent synthetase and ligase
CJ010_01040	COG0204	Acyl-transferase
CJ010_01045	COG0640	Transcriptional regulator
CJ010_01055	COG0356	it plays a direct role in the translocation of protons across the membrane
CJ010_01065	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CJ010_01070	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CJ010_01075	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CJ010_01080	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CJ010_01085	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CJ010_01090	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CJ010_01105	COG2226	methyltransferase
CJ010_01115	COG0745	RESPONSE REGULATOR receiver
CJ010_01135	COG0121	glutamine amidotransferase
CJ010_01145	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CJ010_01155	COG0154	amidase activity
CJ010_01160	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CJ010_01165	COG1077	Cell shape determining protein MreB Mrl
CJ010_01180	COG0768	penicillin binding
CJ010_01185	COG0772	Belongs to the SEDS family
CJ010_01190	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CJ010_01195	COG1686	Belongs to the peptidase S11 family
CJ010_01205	COG2921	Belongs to the UPF0250 family
CJ010_01210	COG0321	lipoyl(octanoyl) transferase activity
CJ010_01215	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CJ010_01220	COG2318	DinB family
CJ010_01270	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_01315	COG0512	Glutamine amidotransferase of anthranilate synthase
CJ010_01315	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CJ010_01325	COG0419	ATPase involved in DNA repair
CJ010_01345	COG1473	amidohydrolase
CJ010_01350	COG1917	Cupin 2, conserved barrel domain protein
CJ010_01350	COG2207	Transcriptional regulator
CJ010_01380	COG1522	sequence-specific DNA binding
CJ010_01395	COG1012	belongs to the aldehyde dehydrogenase family
CJ010_01405	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJ010_01415	COG0601	transmembrane transport
CJ010_01420	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJ010_01425	COG4172	Belongs to the ABC transporter superfamily
CJ010_01530	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CJ010_01540	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CJ010_01545	COG1522	sequence-specific DNA binding
CJ010_01550	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CJ010_01570	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ010_01575	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ010_01580	COG1538	Outer membrane efflux protein
CJ010_01585	COG2193	ferroxidase activity
CJ010_01590	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CJ010_01605	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CJ010_01615	COG0726	polysaccharide deacetylase
CJ010_01655	COG0642	Histidine kinase
CJ010_01660	COG0745	RESPONSE REGULATOR receiver
CJ010_01770	COG2885	chlorophyll binding
CJ010_01835	COG1131	(ABC) transporter
CJ010_01870	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CJ010_01890	COG1024	Enoyl-CoA hydratase
CJ010_01895	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ010_01900	COG2050	protein possibly involved in aromatic compounds catabolism
CJ010_01910	COG3396	Phenylacetate-CoA oxygenase
CJ010_01915	COG3460	Phenylacetate-CoA oxygenase
CJ010_01920	COG3396	Phenylacetate-CoA oxygenase
CJ010_01925	COG2151	metal-sulfur cluster biosynthetic enzyme
CJ010_01930	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CJ010_01940	COG0183	Belongs to the thiolase family
CJ010_01955	COG0411	ABC transporter
CJ010_01965	COG0776	regulation of translation
CJ010_01970	COG0513	Belongs to the DEAD box helicase family
CJ010_01975	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CJ010_01980	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CJ010_01995	COG4232	protein-disulfide reductase activity
CJ010_02000	COG1324	tolerance protein
CJ010_02005	COG2070	2-Nitropropane dioxygenase
CJ010_02015	COG3706	GGDEF domain
CJ010_02060	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CJ010_02065	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CJ010_02070	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CJ010_02080	COG1846	Transcriptional regulator
CJ010_02085	COG1764	response to oxidative stress
CJ010_02095	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CJ010_02120	COG1309	transcriptional regulator
CJ010_02145	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CJ010_02150	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_02165	COG0583	DNA-binding transcription factor activity
CJ010_02175	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CJ010_02190	COG5001	Diguanylate cyclase
CJ010_02190	COG4251	negative regulation of phosphorylation
CJ010_02190	COG2203	Gaf domain
CJ010_02190	COG3706	GGDEF domain
CJ010_02200	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CJ010_02205	COG1192	Involved in chromosome partitioning
CJ010_02220	COG0025	NhaP-type Na H and K H
CJ010_02280	COG1518	maintenance of DNA repeat elements
CJ010_02295	COG0625	glutathione transferase activity
CJ010_02320	COG4638	Rieske (2fe-2S)
CJ010_02325	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CJ010_02330	COG2146	nitrite reductase [NAD(P)H] activity
CJ010_02340	COG0559	Belongs to the binding-protein-dependent transport system permease family
CJ010_02355	COG0410	ABC transporter
CJ010_02365	COG2119	membrane
CJ010_02370	COG1309	transcriptional regulator
CJ010_02375	COG0625	glutathione transferase activity
CJ010_02380	COG0318	PFAM AMP-dependent synthetase and ligase
CJ010_02405	COG2267	carboxylic ester hydrolase activity
CJ010_02410	COG2309	aminopeptidase activity
CJ010_02435	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CJ010_02440	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CJ010_02455	COG0018	arginyl-trna synthetase
CJ010_02470	COG0300	oxidoreductase activity
CJ010_02495	COG1459	type II secretion system
CJ010_02500	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CJ010_02530	COG2165	general secretion pathway protein
CJ010_02555	COG3243	poly(R)-hydroxyalkanoic acid synthase
CJ010_02560	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ010_02575	COG0183	Belongs to the thiolase family
CJ010_02580	COG1960	acyl-CoA dehydrogenase activity
CJ010_02605	COG1660	Displays ATPase and GTPase activities
CJ010_02620	COG2201	protein-glutamate methylesterase activity
CJ010_02630	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CJ010_02635	COG0840	transmembrane signaling receptor activity
CJ010_02640	COG0835	chemotaxis
CJ010_02645	COG0840	transmembrane signaling receptor activity
CJ010_02650	COG0840	transmembrane signaling receptor activity
CJ010_02655	COG2198	Histidine kinase
CJ010_02655	COG0643	Histidine kinase
CJ010_02675	COG0412	Dienelactone hydrolase
CJ010_02685	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CJ010_02725	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_02780	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CJ010_02785	COG0602	queuosine metabolic process
CJ010_02800	COG0823	Involved in the tonB-independent uptake of proteins
CJ010_02815	COG0811	peptide transport
CJ010_02820	COG0824	Thioesterase
CJ010_02830	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CJ010_02835	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CJ010_02855	COG0330	HflC and HflK could
CJ010_02865	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CJ010_02870	COG2895	sulfate adenylyltransferase (ATP) activity
CJ010_02875	COG0175	sulfate reduction
CJ010_02880	COG0175	sulfate reduction
CJ010_02895	COG0730	response to heat
CJ010_02900	COG0583	DNA-binding transcription factor activity
CJ010_02920	COG1126	abc transporter atp-binding protein
CJ010_02925	COG0765	amino acid transport
CJ010_02930	COG0765	amino acid transport
CJ010_02935	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ010_02945	COG4191	Histidine kinase
CJ010_02960	COG5265	(ABC) transporter
CJ010_02965	COG1280	lysine exporter protein (LysE YggA)
CJ010_02970	COG0523	cobalamin synthesis protein
CJ010_02980	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CJ010_02990	COG0004	ammonium transporteR
CJ010_03000	COG0523	cobalamin synthesis protein
CJ010_03025	COG3284	Transcriptional regulator
CJ010_03030	COG0145	ligase activity
CJ010_03035	COG4647	ligase activity
CJ010_03040	COG0145	ligase activity
CJ010_03065	COG1033	growth of symbiont in host cell
CJ010_03065	COG2409	Drug exporters of the RND superfamily
CJ010_03085	COG0848	biopolymer transport protein
CJ010_03090	COG0811	peptide transport
CJ010_03105	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CJ010_03115	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CJ010_03120	COG1459	type II secretion system
CJ010_03125	COG2165	general secretion pathway protein
CJ010_03130	COG4970	Tfp pilus assembly protein FimT
CJ010_03165	COG1450	Type ii and iii secretion system protein
CJ010_03185	COG1960	acyl-CoA dehydrogenase activity
CJ010_03195	COG1024	Enoyl-CoA hydratase
CJ010_03195	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ010_03200	COG1607	acyl-coa hydrolase
CJ010_03210	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ010_03210	COG1024	Enoyl-CoA hydratase
CJ010_03215	COG0183	Belongs to the thiolase family
CJ010_03220	COG1024	Enoyl-CoA hydratase
CJ010_03245	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
CJ010_03255	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CJ010_03260	COG3161	chorismate lyase activity
CJ010_03265	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CJ010_03275	COG0251	oxidation-reduction process
CJ010_03280	COG1238	metal cluster binding
CJ010_03295	COG0037	tRNA processing
CJ010_03300	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_03325	COG0625	glutathione transferase activity
CJ010_03335	COG0617	tRNA 3'-terminal CCA addition
CJ010_03350	COG0741	lytic transglycosylase activity
CJ010_03355	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CJ010_03360	COG3706	GGDEF domain
CJ010_03365	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ010_03370	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CJ010_03375	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CJ010_03385	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CJ010_03390	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CJ010_03400	COG2137	regulation of response to DNA damage stimulus
CJ010_03405	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CJ010_03410	COG1546	Belongs to the CinA family
CJ010_03415	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CJ010_03420	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CJ010_03425	COG2914	Belongs to the UPF0125 (RnfH) family
CJ010_03450	COG2878	Part of a membrane complex involved in electron transport
CJ010_03455	COG4657	Part of a membrane complex involved in electron transport
CJ010_03480	COG2032	superoxide dismutase activity
CJ010_03490	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CJ010_03500	COG0426	domain, Protein
CJ010_03525	COG3647	Membrane
CJ010_03550	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CJ010_03560	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
CJ010_03595	COG0840	transmembrane signaling receptor activity
CJ010_03710	COG2823	Periplasmic or secreted lipoprotein
CJ010_03730	COG2201	protein-glutamate methylesterase activity
CJ010_03745	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CJ010_03750	COG0393	Putative heavy-metal-binding
CJ010_03760	COG0217	transcriptional regulatory protein
CJ010_03770	COG0433	COG0433 Predicted ATPase
CJ010_03775	COG0583	DNA-binding transcription factor activity
CJ010_03780	COG0477	Major facilitator Superfamily
CJ010_03785	COG0697	spore germination
CJ010_03790	COG2814	Major facilitator Superfamily
CJ010_03795	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CJ010_03805	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CJ010_03815	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CJ010_03825	COG1560	Kdo2-lipid A biosynthetic process
CJ010_03835	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CJ010_03845	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CJ010_03855	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CJ010_03875	COG2255	four-way junction helicase activity
CJ010_03880	COG0632	four-way junction helicase activity
CJ010_03895	COG0477	Major facilitator Superfamily
CJ010_03915	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CJ010_03925	COG3128	pkhd-type hydroxylase
CJ010_03935	COG4774	siderophore transport
CJ010_03945	COG1136	(ABC) transporter
CJ010_03945	COG0577	efflux transmembrane transporter activity
CJ010_03950	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ010_03980	COG4256	Hemin uptake protein
CJ010_03995	COG5001	Diguanylate cyclase
CJ010_04015	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CJ010_04020	COG3132	Protein of unknown function, DUF480
CJ010_04030	COG2885	chlorophyll binding
CJ010_04030	COG3047	cAMP biosynthetic process
CJ010_04040	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CJ010_04045	COG0129	dihydroxy-acid dehydratase activity
CJ010_04070	COG0730	response to heat
CJ010_04080	COG0247	lactate metabolic process
CJ010_04100	COG1121	(ABC) transporter
CJ010_04105	COG0735	belongs to the Fur family
CJ010_04115	COG2274	protein secretion by the type I secretion system
CJ010_04120	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ010_04125	COG2197	response regulator
CJ010_04165	COG2198	Histidine kinase
CJ010_04165	COG5002	protein histidine kinase activity
CJ010_04165	COG0784	Response regulator, receiver
CJ010_04190	COG1132	(ABC) transporter
CJ010_04195	COG1451	nucleotide metabolic process
CJ010_04205	COG0513	Belongs to the DEAD box helicase family
CJ010_04210	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJ010_04220	COG1522	sequence-specific DNA binding
CJ010_04225	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CJ010_04230	COG2267	carboxylic ester hydrolase activity
CJ010_04235	COG2453	phosphatase
CJ010_04235	COG0671	phosphoesterase, PA-phosphatase related
CJ010_04245	COG0204	Acyl-transferase
CJ010_04250	COG4589	Belongs to the CDS family
CJ010_04260	COG0559	Belongs to the binding-protein-dependent transport system permease family
CJ010_04285	COG1024	Enoyl-CoA hydratase
CJ010_04290	COG3162	membrane
CJ010_04295	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CJ010_04300	COG1253	flavin adenine dinucleotide binding
CJ010_04305	COG1802	Transcriptional regulator
CJ010_04310	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CJ010_04310	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CJ010_04315	COG1703	isobutyryl-CoA mutase activity
CJ010_04320	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CJ010_04325	COG0439	Biotin carboxylase
CJ010_04335	COG1509	lysine 2,3-aminomutase activity
CJ010_04340	COG2321	neutral zinc metallopeptidase
CJ010_04365	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CJ010_04365	COG1703	isobutyryl-CoA mutase activity
CJ010_04365	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CJ010_04380	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
CJ010_04385	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CJ010_04390	COG1472	Belongs to the glycosyl hydrolase 3 family
CJ010_04395	COG4452	Inner membrane protein CreD
CJ010_04400	COG2205	protein histidine kinase activity
CJ010_04405	COG0745	RESPONSE REGULATOR receiver
CJ010_04410	COG2239	Acts as a magnesium transporter
CJ010_04415	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CJ010_04420	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CJ010_04430	COG0557	exoribonuclease II activity
CJ010_04435	COG2226	methyltransferase
CJ010_04440	COG3150	esterase
CJ010_04445	COG1968	undecaprenyl-diphosphatase activity
CJ010_04460	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CJ010_04465	COG1643	Atp-dependent helicase
CJ010_04475	COG0360	Binds together with S18 to 16S ribosomal RNA
CJ010_04480	COG2965	DNA replication, synthesis of RNA primer
CJ010_04485	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CJ010_04490	COG0359	binds to the 23S rRNA
CJ010_04495	COG0305	Participates in initiation and elongation during chromosome replication
CJ010_04525	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CJ010_04530	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CJ010_04535	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CJ010_04545	COG0494	nUDIX hydrolase
CJ010_04550	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
CJ010_04555	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
CJ010_04560	COG0237	dephospho-CoA kinase activity
CJ010_04570	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CJ010_04575	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
CJ010_04575	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
CJ010_04585	COG3852	Histidine kinase
CJ010_04605	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CJ010_04610	COG3568	Endonuclease Exonuclease Phosphatase
CJ010_04620	COG1832	CoA-binding protein
CJ010_04625	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CJ010_04645	COG0463	Glycosyl transferase, family 2
CJ010_04660	COG0012	GTP binding
CJ010_04665	COG0193	aminoacyl-tRNA hydrolase activity
CJ010_04670	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CJ010_04675	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CJ010_04685	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CJ010_04690	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
CJ010_04700	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CJ010_04705	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CJ010_04710	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CJ010_04715	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CJ010_04720	COG0742	ribosomal rna small subunit methyltransferase
CJ010_04725	COG0612	Peptidase, M16
CJ010_04730	COG0612	Peptidase, M16
CJ010_04740	COG2884	Cell division ATP-binding protein ftsE
CJ010_04745	COG2177	Part of the ABC transporter FtsEX involved in
CJ010_04755	COG3634	alkyl hydroperoxide reductase activity
CJ010_04770	COG4191	Histidine kinase
CJ010_04770	COG0784	Response regulator, receiver
CJ010_04790	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CJ010_04795	COG1702	phosphate starvation-inducible protein PhoH
CJ010_04800	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CJ010_04805	COG4535	Mg2 and Co2 transporter CorC
CJ010_04810	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CJ010_04825	COG0752	glycyl-tRNA synthetase alpha subunit
CJ010_04830	COG0751	glycine-tRNA ligase activity
CJ010_04835	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CJ010_04840	COG0204	Acyl-transferase
CJ010_04850	COG1024	Enoyl-CoA hydratase
CJ010_04855	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CJ010_04865	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CJ010_04910	COG1459	type II secretion system
CJ010_04915	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CJ010_04930	COG1127	ABC transporter
CJ010_04935	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CJ010_04940	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CJ010_04960	COG1131	(ABC) transporter
CJ010_04965	COG0842	Transport permease protein
CJ010_04975	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CJ010_04980	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CJ010_04985	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CJ010_04990	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CJ010_04995	COG0436	Aminotransferase
CJ010_05000	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
CJ010_05005	COG0280	phosphate acetyltransferase
CJ010_05005	COG0281	malic enzyme
CJ010_05015	COG1686	Belongs to the peptidase S11 family
CJ010_05025	COG0247	lactate metabolic process
CJ010_05030	COG1139	Iron-sulfur cluster binding protein
CJ010_05035	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CJ010_05050	COG1187	pseudouridine synthase activity
CJ010_05065	COG0577	efflux transmembrane transporter activity
CJ010_05065	COG1136	(ABC) transporter
CJ010_05070	COG1136	(ABC) transporter
CJ010_05070	COG0577	efflux transmembrane transporter activity
CJ010_05075	COG1136	(ABC) transporter
CJ010_05075	COG0577	efflux transmembrane transporter activity
CJ010_05085	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CJ010_05090	COG0668	transmembrane transport
CJ010_05095	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CJ010_05100	COG2885	chlorophyll binding
CJ010_05105	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CJ010_05115	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CJ010_05120	COG0351	phosphomethylpyrimidine kinase
CJ010_05150	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ010_05155	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CJ010_05160	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJ010_05180	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CJ010_05195	COG0438	transferase activity, transferring glycosyl groups
CJ010_05195	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CJ010_05220	COG2264	protein methyltransferase activity
CJ010_05225	COG0439	Biotin carboxylase
CJ010_05230	COG0511	ligase activity, forming carbon-carbon bonds
CJ010_05235	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CJ010_05240	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJ010_05250	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CJ010_05260	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CJ010_05265	COG0792	nuclease activity
CJ010_05275	COG0418	dihydroorotase activity
CJ010_05290	COG2001	Belongs to the MraZ family
CJ010_05310	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CJ010_05315	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CJ010_05320	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CJ010_05325	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CJ010_05330	COG0772	Belongs to the SEDS family
CJ010_05335	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CJ010_05340	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CJ010_05345	COG1181	Belongs to the D-alanine--D-alanine ligase family
CJ010_05350	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CJ010_05360	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CJ010_05365	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CJ010_05380	COG0653	protein targeting
CJ010_05390	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CJ010_05395	COG0631	protein serine/threonine phosphatase activity
CJ010_05415	COG2967	ApaG domain
CJ010_05430	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CJ010_05435	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CJ010_05440	COG1862	Preprotein translocase
CJ010_05450	COG0343	queuine tRNA-ribosyltransferase activity
CJ010_05455	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CJ010_05465	COG0583	DNA-binding transcription factor activity
CJ010_05475	COG0670	Belongs to the BI1 family
CJ010_05480	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CJ010_05480	COG4651	solute:proton antiporter activity
CJ010_05485	COG1253	flavin adenine dinucleotide binding
CJ010_05490	COG0861	Integral membrane protein TerC family
CJ010_05495	COG0825	malonyl-CoA metabolic process
CJ010_05500	COG0037	tRNA processing
CJ010_05530	COG0586	Pfam SNARE associated Golgi protein
CJ010_05535	COG0105	UTP biosynthetic process
CJ010_05540	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CJ010_05555	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CJ010_05560	COG0124	histidyl-tRNA synthetase
CJ010_05575	COG1160	GTP binding
CJ010_05580	COG1923	regulation of RNA biosynthetic process
CJ010_05585	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CJ010_05590	COG0330	HflC and HflK could
CJ010_05595	COG0330	HflC and HflK could
CJ010_05605	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
CJ010_05610	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CJ010_05625	COG0557	exoribonuclease II activity
CJ010_05630	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CJ010_05635	COG3707	response regulator
CJ010_05640	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ010_05650	COG1116	anion transmembrane transporter activity
CJ010_05665	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CJ010_05675	COG0243	molybdopterin cofactor binding
CJ010_05700	COG0551	DNA topoisomerase type I activity
CJ010_05710	COG0716	FMN binding
CJ010_05725	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CJ010_05730	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CJ010_05735	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CJ010_05740	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CJ010_05745	COG0723	plastoquinol--plastocyanin reductase activity
CJ010_05750	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CJ010_05755	COG2857	Cytochrome c1
CJ010_05760	COG0625	glutathione transferase activity
CJ010_05770	COG0438	transferase activity, transferring glycosyl groups
CJ010_05775	COG2703	oxygen carrier activity
CJ010_05780	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJ010_05785	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
CJ010_05810	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CJ010_05815	COG0459	protein refolding
CJ010_05820	COG0745	RESPONSE REGULATOR receiver
CJ010_05825	COG0642	Histidine kinase
CJ010_05830	COG3162	membrane
CJ010_05905	COG1196	nuclear chromosome segregation
CJ010_05945	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CJ010_05950	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CJ010_05955	COG2890	protein-(glutamine-N5) methyltransferase activity
CJ010_05985	COG2815	serine threonine protein kinase
CJ010_05985	COG0515	serine threonine protein kinase
CJ010_05990	COG0165	Argininosuccinate lyase
CJ010_05995	COG3275	phosphorelay sensor kinase activity
CJ010_06005	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CJ010_06015	COG0181	hydroxymethylbilane synthase activity
CJ010_06025	COG2959	enzyme of heme biosynthesis
CJ010_06040	COG0277	FAD linked oxidase domain protein
CJ010_06045	COG0277	FAD linked oxidase domain protein
CJ010_06050	COG0247	lactate metabolic process
CJ010_06055	COG0631	protein serine/threonine phosphatase activity
CJ010_06060	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CJ010_06065	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CJ010_06070	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CJ010_06085	COG0513	Belongs to the DEAD box helicase family
CJ010_06090	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
CJ010_06095	COG0667	Aldo Keto reductase
CJ010_06110	COG0584	glycerophosphoryl diester phosphodiesterase
CJ010_06115	COG0142	geranyltranstransferase activity
CJ010_06125	COG0583	DNA-binding transcription factor activity
CJ010_06130	COG1304	FMN binding
CJ010_06140	COG0564	pseudouridine synthase activity
CJ010_06155	COG3243	poly(R)-hydroxyalkanoic acid synthase
CJ010_06160	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_06195	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CJ010_06200	COG1752	Esterase of the alpha-beta hydrolase superfamily
CJ010_06205	COG0277	FAD linked oxidase domain protein
CJ010_06240	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ010_06245	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CJ010_06265	COG0318	PFAM AMP-dependent synthetase and ligase
CJ010_06270	COG0028	Belongs to the TPP enzyme family
CJ010_06275	COG0440	acetolactate synthase activity
CJ010_06280	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CJ010_06290	COG0501	Belongs to the peptidase M48B family
CJ010_06295	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CJ010_06300	COG0066	3-isopropylmalate dehydratase activity
CJ010_06305	COG0473	3-isopropylmalate dehydrogenase activity
CJ010_06325	COG0101	tRNA pseudouridine synthase activity
CJ010_06330	COG0135	phosphoribosylanthranilate isomerase activity
CJ010_06335	COG0133	tryptophan synthase activity
CJ010_06340	COG0159	tryptophan synthase activity
CJ010_06345	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CJ010_06350	COG0285	dihydrofolate synthase activity
CJ010_06375	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CJ010_06380	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CJ010_06385	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CJ010_06400	COG0215	cysteine-tRNA ligase activity
CJ010_06410	COG0484	heat shock protein binding
CJ010_06415	COG0443	Heat shock 70 kDa protein
CJ010_06420	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CJ010_06450	COG0287	Prephenate dehydrogenase
CJ010_06455	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CJ010_06465	COG0776	regulation of translation
CJ010_06475	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CJ010_06510	COG2261	transglycosylase associated protein
CJ010_06520	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CJ010_06525	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CJ010_06530	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CJ010_06535	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CJ010_06540	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CJ010_06545	COG0072	phenylalanine-tRNA ligase activity
CJ010_06545	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CJ010_06550	COG0776	regulation of translation
CJ010_06565	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
CJ010_06570	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CJ010_06580	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CJ010_06585	COG2951	lytic endotransglycosylase activity
CJ010_06600	COG0714	Associated with various cellular activities
CJ010_06605	COG0123	including yeast histone deacetylase and acetoin utilization protein
CJ010_06610	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CJ010_06615	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CJ010_06625	COG2850	peptidyl-arginine hydroxylation
CJ010_06630	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CJ010_06655	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CJ010_06670	COG1191	sigma factor activity
CJ010_06675	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CJ010_06690	COG2703	oxygen carrier activity
CJ010_06715	COG2860	membrane
CJ010_06760	COG0559	Belongs to the binding-protein-dependent transport system permease family
CJ010_06770	COG0411	ABC transporter
CJ010_06785	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CJ010_06795	COG0542	response to heat
CJ010_06800	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CJ010_06805	COG1278	Cold shock
CJ010_06810	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CJ010_06815	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CJ010_06820	COG2003	Belongs to the UPF0758 family
CJ010_06825	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CJ010_06830	COG0756	dUTP diphosphatase activity
CJ010_06835	COG1051	belongs to the nudix hydrolase family
CJ010_06845	COG0446	pyridine nucleotide-disulphide oxidoreductase
CJ010_06855	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CJ010_06890	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
CJ010_06915	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CJ010_06925	COG1346	cytolysis
CJ010_06930	COG1380	Effector of murein hydrolase LrgA
CJ010_06955	COG1845	cytochrome c oxidase, subunit III
CJ010_06965	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CJ010_06970	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CJ010_06980	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CJ010_06985	COG0730	response to heat
CJ010_06990	COG0583	DNA-binding transcription factor activity
CJ010_07010	COG0469	pyruvate kinase activity
CJ010_07030	COG2084	Dehydrogenase
CJ010_07035	COG3622	Belongs to the hyi family
CJ010_07040	COG3960	tartronate-semialdehyde synthase activity
CJ010_07045	COG0148	phosphopyruvate hydratase activity
CJ010_07050	COG0583	DNA-binding transcription factor activity
CJ010_07055	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CJ010_07065	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CJ010_07070	COG2146	nitrite reductase [NAD(P)H] activity
CJ010_07075	COG2116	formate transmembrane transporter activity
CJ010_07080	COG2815	serine threonine protein kinase
CJ010_07080	COG0515	serine threonine protein kinase
CJ010_07095	COG2233	PERMEase
CJ010_07100	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
CJ010_07105	COG4266	Belongs to the allantoicase family
CJ010_07110	COG1301	dicarboxylic acid transport
CJ010_07125	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
CJ010_07130	COG4266	Belongs to the allantoicase family
CJ010_07145	COG3195	allantoin biosynthetic process
CJ010_07145	COG3648	Uricase
CJ010_07170	COG3550	peptidyl-serine autophosphorylation
CJ010_07185	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CJ010_07190	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
CJ010_07200	COG0535	radical SAM domain protein
CJ010_07220	COG3181	Tripartite tricarboxylate transporter family receptor
CJ010_07235	COG0861	Integral membrane protein TerC family
CJ010_07255	COG0642	Histidine kinase
CJ010_07280	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CJ010_07305	COG0410	ABC transporter
CJ010_07310	COG0411	ABC transporter
CJ010_07325	COG0683	leucine binding
CJ010_07335	COG0633	Ferredoxin
CJ010_07345	COG4638	Rieske (2fe-2S)
CJ010_07365	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CJ010_07370	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ010_07375	COG1469	GTP cyclohydrolase I activity
CJ010_07380	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CJ010_07385	COG0142	geranyltranstransferase activity
CJ010_07390	COG1722	exodeoxyribonuclease VII activity
CJ010_07400	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CJ010_07405	COG1047	Peptidyl-prolyl cis-trans
CJ010_07410	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CJ010_07415	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CJ010_07420	COG0196	riboflavin kinase activity
CJ010_07430	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ010_07465	COG0803	Belongs to the bacterial solute-binding protein 9 family
CJ010_07470	COG1121	(ABC) transporter
CJ010_07475	COG1321	iron dependent repressor
CJ010_07475	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CJ010_07480	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CJ010_07485	COG3350	monooxygenase activity
CJ010_07505	COG0459	protein refolding
CJ010_07515	COG0346	lactoylglutathione lyase activity
CJ010_07535	COG2204	response regulator
CJ010_07540	COG0723	plastoquinol--plastocyanin reductase activity
CJ010_07545	COG0446	pyridine nucleotide-disulphide oxidoreductase
CJ010_07560	COG0024	Methionine aminopeptidase
CJ010_07565	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJ010_07570	COG0802	atpase or kinase
CJ010_07585	COG4682	membrane
CJ010_07590	COG4948	Mandelate Racemase Muconate Lactonizing
CJ010_07595	COG0583	DNA-binding transcription factor activity
CJ010_07615	COG0826	peptidase U32
CJ010_07625	COG2133	pyrroloquinoline quinone binding
CJ010_07640	COG2815	serine threonine protein kinase
CJ010_07640	COG0515	serine threonine protein kinase
CJ010_07650	COG2195	Cleaves the N-terminal amino acid of tripeptides
CJ010_07660	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
CJ010_07670	COG3360	Dodecin
CJ010_07690	COG0484	heat shock protein binding
CJ010_07695	COG1607	acyl-coa hydrolase
CJ010_07700	COG4628	conserved protein (DUF2132)
CJ010_07705	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CJ010_07725	COG1127	ABC transporter
CJ010_07730	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CJ010_07735	COG0488	(ABC) transporter
CJ010_07755	COG0386	Belongs to the glutathione peroxidase family
CJ010_07765	COG1858	cytochrome C peroxidase
CJ010_07775	COG0583	DNA-binding transcription factor activity
CJ010_07780	COG0471	metal ion transport
CJ010_07785	COG1215	transferase activity, transferring glycosyl groups
CJ010_07800	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CJ010_07800	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CJ010_07805	COG0509	glycine decarboxylation via glycine cleavage system
CJ010_07810	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CJ010_07850	COG2223	nitrite transmembrane transporter activity
CJ010_07855	COG2815	serine threonine protein kinase
CJ010_07855	COG0515	serine threonine protein kinase
CJ010_07875	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CJ010_07885	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CJ010_07890	COG0312	modulator of DNA gyrase
CJ010_07945	COG3501	Rhs element vgr protein
CJ010_07965	COG1157	protein secretion by the type III secretion system
CJ010_07975	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CJ010_07980	COG1766	The M ring may be actively involved in energy transduction
CJ010_07985	COG3852	Histidine kinase
CJ010_07990	COG2204	response regulator
CJ010_07995	COG1677	Flagellar hook-basal body complex protein FliE
CJ010_08000	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
CJ010_08005	COG2257	FlhB HrpN YscU SpaS Family
CJ010_08025	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CJ010_08045	COG3754	Rhamnan synthesis protein F
CJ010_08065	COG3706	GGDEF domain
CJ010_08080	COG3045	CreA protein
CJ010_08110	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CJ010_08115	COG2824	Alkylphosphonate utilization operon protein PhnA
CJ010_08125	COG0390	transport system, permease component
CJ010_08130	COG1136	(ABC) transporter
CJ010_08195	COG0459	protein refolding
CJ010_08210	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJ010_08215	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CJ010_08220	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJ010_08220	COG0022	dehydrogenase e1 component
CJ010_08235	COG1067	ATP-dependent peptidase activity
CJ010_08260	COG0840	transmembrane signaling receptor activity
CJ010_08330	COG1739	Uncharacterized protein family UPF0029
CJ010_08340	COG0604	alcohol dehydrogenase
CJ010_08340	COG3321	synthase
CJ010_08340	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_08350	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
CJ010_08355	COG0765	amino acid transport
CJ010_08360	COG4597	amino acid ABC transporter
CJ010_08365	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ010_08370	COG0583	DNA-binding transcription factor activity
CJ010_08375	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CJ010_08380	COG4208	sulfate ABC transporter
CJ010_08385	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CJ010_08405	COG2217	Heavy metal translocating P-type atpase
CJ010_08415	COG3278	Belongs to the heme-copper respiratory oxidase family
CJ010_08465	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CJ010_08470	COG3243	poly(R)-hydroxyalkanoic acid synthase
CJ010_08475	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CJ010_08480	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CJ010_08495	COG2217	Heavy metal translocating P-type atpase
CJ010_08500	COG2608	mercury ion transmembrane transporter activity
CJ010_08510	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CJ010_08520	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CJ010_08520	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CJ010_08525	COG0347	Belongs to the P(II) protein family
CJ010_08530	COG2840	Smr protein MutS2
CJ010_08535	COG0492	ferredoxin-NADP+ reductase activity
CJ010_08545	COG1674	ftsk spoiiie
CJ010_08550	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CJ010_08555	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CJ010_08565	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CJ010_08570	COG0840	transmembrane signaling receptor activity
CJ010_08575	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CJ010_08580	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJ010_08585	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CJ010_08600	COG4566	intracellular signal transduction
CJ010_08605	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CJ010_08610	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CJ010_08615	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CJ010_08620	COG0009	L-threonylcarbamoyladenylate synthase
CJ010_08630	COG0505	Belongs to the CarA family
CJ010_08635	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CJ010_08640	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CJ010_08650	COG1534	Rna-binding protein
CJ010_08655	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
CJ010_08660	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CJ010_08665	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CJ010_08670	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CJ010_08675	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CJ010_08680	COG0573	inorganic phosphate transmembrane transporter activity
CJ010_08685	COG0581	inorganic phosphate transmembrane transporter activity
CJ010_08690	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CJ010_08695	COG0840	transmembrane signaling receptor activity
CJ010_08705	COG0149	triose-phosphate isomerase activity
CJ010_08720	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CJ010_08725	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CJ010_08730	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CJ010_08735	COG0649	NAD binding
CJ010_08740	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
CJ010_08750	COG1034	ATP synthesis coupled electron transport
CJ010_08755	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CJ010_08760	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CJ010_08770	COG0713	ATP synthesis coupled electron transport
CJ010_08785	COG1007	ATP synthesis coupled electron transport
CJ010_08790	COG0494	nUDIX hydrolase
CJ010_08800	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CJ010_08805	COG3383	formate dehydrogenase (NAD+) activity
CJ010_08810	COG1941	NADH ubiquinone oxidoreductase 20 kDa subunit
CJ010_08815	COG3259	Nickel-dependent hydrogenase
CJ010_08825	COG3135	benzoate transporter
CJ010_08835	COG1230	cation diffusion facilitator family transporter
CJ010_08850	COG0596	Alpha beta hydrolase
CJ010_08850	COG2226	methyltransferase
CJ010_08850	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CJ010_08870	COG0326	Molecular chaperone. Has ATPase activity
CJ010_08890	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CJ010_08890	COG0426	domain, Protein
CJ010_08920	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CJ010_08935	COG4658	electron transport chain
CJ010_08940	COG4656	Part of a membrane complex involved in electron transport
CJ010_08945	COG2878	Part of a membrane complex involved in electron transport
CJ010_08950	COG4657	Part of a membrane complex involved in electron transport
CJ010_08965	COG0745	RESPONSE REGULATOR receiver
CJ010_08965	COG3706	GGDEF domain
CJ010_08985	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CJ010_08990	COG1360	Flagellar Motor Protein
CJ010_09000	COG0643	Histidine kinase
CJ010_09000	COG2198	Histidine kinase
CJ010_09010	COG0840	transmembrane signaling receptor activity
CJ010_09015	COG0840	transmembrane signaling receptor activity
CJ010_09025	COG2201	protein-glutamate methylesterase activity
CJ010_09035	COG0835	chemotaxis
CJ010_09035	COG0784	Response regulator, receiver
CJ010_09040	COG0784	Response regulator, receiver
CJ010_09040	COG0835	chemotaxis
CJ010_09045	COG0745	RESPONSE REGULATOR receiver
CJ010_09050	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
CJ010_09055	COG0643	Histidine kinase
CJ010_09055	COG2198	Histidine kinase
CJ010_09075	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CJ010_09080	COG1570	exodeoxyribonuclease VII activity
CJ010_09085	COG0811	peptide transport
CJ010_09090	COG0848	biopolymer transport protein
CJ010_09095	COG1663	tetraacyldisaccharide 4'-kinase activity
CJ010_09100	COG2835	tetraacyldisaccharide 4'-kinase activity
CJ010_09105	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CJ010_09110	COG0563	adenylate kinase activity
CJ010_09120	COG0405	Gamma-glutamyltransferase
CJ010_09125	COG5002	protein histidine kinase activity
CJ010_09125	COG5001	Diguanylate cyclase
CJ010_09130	COG2249	NAD(P)H dehydrogenase (quinone) activity
CJ010_09140	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CJ010_09155	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJ010_09155	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
CJ010_09160	COG4085	toxin activity
CJ010_09160	COG1525	nuclease
CJ010_09160	COG0737	Belongs to the 5'-nucleotidase family
CJ010_09170	COG0686	Belongs to the AlaDH PNT family
CJ010_09175	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CJ010_09185	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CJ010_09195	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CJ010_09205	COG2346	COG2346, Truncated hemoglobins
CJ010_09215	COG0784	Response regulator, receiver
CJ010_09230	COG1196	nuclear chromosome segregation
CJ010_09280	COG4585	Histidine kinase
CJ010_09295	COG1032	radical SAM domain protein
CJ010_09305	COG1136	(ABC) transporter
CJ010_09325	COG2308	Evidence 4 Homologs of previously reported genes of
CJ010_09335	COG1162	GTPase activity
CJ010_09345	COG0501	Belongs to the peptidase M48B family
CJ010_09350	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CJ010_09360	COG0254	rRNA binding
CJ010_09375	COG3012	SEC-C Motif Domain Protein
CJ010_09375	COG3318	Belongs to the UPF0149 family
CJ010_09410	COG3012	SEC-C Motif Domain Protein
CJ010_09420	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CJ010_09425	COG1049	propionate catabolic process, 2-methylcitrate cycle
CJ010_09450	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CJ010_09455	COG0022	dehydrogenase e1 component
CJ010_09455	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJ010_09470	COG2814	Major facilitator Superfamily
CJ010_09475	COG0583	DNA-binding transcription factor activity
CJ010_09495	COG0039	L-malate dehydrogenase activity
CJ010_09500	COG2188	Transcriptional regulator
CJ010_09515	COG1053	succinate dehydrogenase
CJ010_09520	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CJ010_09525	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CJ010_09535	COG0567	Dehydrogenase, E1 component
CJ010_09540	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJ010_09545	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CJ010_09555	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CJ010_09560	COG1199	ATP-dependent helicase activity
CJ010_09565	COG1763	Mo-molybdopterin cofactor biosynthetic process
CJ010_09570	COG0303	'Molybdopterin
CJ010_09575	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CJ010_09580	COG0314	molybdopterin synthase activity
CJ010_09590	COG0542	response to heat
CJ010_09610	COG3781	membrane
CJ010_09615	COG0747	negative chemotaxis
CJ010_09620	COG0601	transmembrane transport
CJ010_09625	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJ010_09630	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
CJ010_09640	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CJ010_09645	COG2867	negative regulation of translational initiation
CJ010_09650	COG2914	Belongs to the UPF0125 (RnfH) family
CJ010_09665	COG0519	Catalyzes the synthesis of GMP from XMP
CJ010_09665	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CJ010_09670	COG0582	viral genome integration into host DNA
CJ010_09775	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CJ010_09780	COG4251	negative regulation of phosphorylation
CJ010_09790	COG2205	protein histidine kinase activity
CJ010_09790	COG2202	Pas domain
CJ010_09795	COG0590	tRNA wobble adenosine to inosine editing
CJ010_09800	COG1376	ErfK ybiS ycfS ynhG family protein
CJ010_09805	COG2153	protein acetylation
CJ010_09820	COG0354	folic acid binding
CJ010_09825	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CJ010_09830	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CJ010_09845	COG0084	hydrolase, TatD family'
CJ010_09865	COG1305	Transglutaminase-like
CJ010_09870	COG2308	Evidence 4 Homologs of previously reported genes of
CJ010_09870	COG2307	Protein conserved in bacteria
CJ010_09880	COG1473	amidohydrolase
CJ010_09885	COG0577	efflux transmembrane transporter activity
CJ010_09885	COG1136	(ABC) transporter
CJ010_09890	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CJ010_09900	COG1067	ATP-dependent peptidase activity
CJ010_09920	COG0556	nucleotide-excision repair
CJ010_09925	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CJ010_09930	COG1530	ribonuclease E activity
CJ010_09935	COG0564	pseudouridine synthase activity
CJ010_09955	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CJ010_09960	COG0424	maF-like protein
CJ010_09965	COG1399	metal-binding, possibly nucleic acid-binding protein
CJ010_09970	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CJ010_09975	COG0416	fatty acid biosynthetic process
CJ010_09980	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CJ010_09985	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CJ010_09995	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CJ010_10000	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CJ010_10010	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CJ010_10035	COG0515	serine threonine protein kinase
CJ010_10035	COG2815	serine threonine protein kinase
CJ010_10040	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CJ010_10055	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CJ010_10070	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ010_10075	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CJ010_10130	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CJ010_10140	COG0481	GTPase activity
CJ010_10145	COG0681	Belongs to the peptidase S26 family
CJ010_10155	COG0571	ribonuclease III activity
CJ010_10160	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CJ010_10165	COG1381	Involved in DNA repair and RecF pathway recombination
CJ010_10170	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CJ010_10175	COG0736	holo-[acyl-carrier-protein] synthase activity
CJ010_10180	COG1472	Belongs to the glycosyl hydrolase 3 family
CJ010_10185	COG0322	excinuclease ABC activity
CJ010_10255	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CJ010_10310	COG0582	viral genome integration into host DNA
CJ010_10320	COG1396	sequence-specific DNA binding
CJ010_10355	COG0084	hydrolase, TatD family'
CJ010_10450	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CJ010_10475	COG2003	Belongs to the UPF0758 family
CJ010_10575	COG0776	regulation of translation
CJ010_10600	COG0464	growth
CJ010_10615	COG3436	PFAM IS66 Orf2 family protein
CJ010_10625	COG4372	Transposase
CJ010_10690	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CJ010_10735	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CJ010_10790	COG0583	DNA-binding transcription factor activity
CJ010_10820	COG0543	2 iron, 2 sulfur cluster binding
CJ010_10820	COG0633	Ferredoxin
CJ010_10855	COG3350	monooxygenase activity
CJ010_10890	COG3284	Transcriptional regulator
CJ010_10895	COG4251	negative regulation of phosphorylation
CJ010_10900	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJ010_10915	COG0427	acetyl-CoA hydrolase
CJ010_10920	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJ010_10995	COG4772	TonB-dependent receptor
CJ010_11025	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ010_11045	COG1024	Enoyl-CoA hydratase
CJ010_11085	COG1024	Enoyl-CoA hydratase
CJ010_11095	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ010_11105	COG0235	Class ii aldolase
CJ010_11110	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CJ010_11150	COG0583	DNA-binding transcription factor activity
CJ010_11160	COG2897	thiosulfate sulfurtransferase activity
CJ010_11165	COG2391	methyltransferase activity
CJ010_11170	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CJ010_11175	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CJ010_11190	COG0459	protein refolding
CJ010_11195	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CJ010_11205	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CJ010_11215	COG0154	amidase activity
CJ010_11250	COG4771	TonB-dependent receptor
CJ010_11300	COG1538	Outer membrane efflux protein
CJ010_11305	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ010_11310	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ010_11345	COG0583	DNA-binding transcription factor activity
CJ010_11350	COG1396	sequence-specific DNA binding
CJ010_11355	COG1045	serine acetyltransferase
CJ010_11410	COG3237	CsbD-like
CJ010_11440	COG2823	Periplasmic or secreted lipoprotein
CJ010_11445	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJ010_11450	COG0628	permease
CJ010_11455	COG3459	Glycosyltransferase 36 associated
CJ010_11525	COG0840	transmembrane signaling receptor activity
CJ010_11530	COG2205	protein histidine kinase activity
CJ010_11535	COG0745	RESPONSE REGULATOR receiver
CJ010_11555	COG1802	Transcriptional regulator
CJ010_11560	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJ010_11565	COG0183	Belongs to the thiolase family
CJ010_11600	COG0179	Fumarylacetoacetate (FAA) hydrolase
CJ010_11620	COG0840	transmembrane signaling receptor activity
CJ010_11620	COG3290	protein histidine kinase activity
CJ010_11635	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CJ010_11645	COG0850	regulation of cytokinetic process
CJ010_11650	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CJ010_11655	COG1393	Belongs to the ArsC family
CJ010_11660	COG2183	response to ionizing radiation
CJ010_11665	COG0676	glucose-6-phosphate 1-epimerase activity
CJ010_11675	COG2202	Pas domain
CJ010_11675	COG2205	protein histidine kinase activity
CJ010_11685	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
CJ010_11690	COG0709	Synthesizes selenophosphate from selenide and ATP
CJ010_11700	COG4181	ATPase activity
CJ010_11705	COG0560	Phosphoserine phosphatase
CJ010_11710	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CJ010_11725	COG0598	Magnesium transport protein CorA
CJ010_11730	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CJ010_11750	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CJ010_11755	COG3885	ferrous iron binding
CJ010_11755	COG2078	PFAM AMMECR1 domain protein
CJ010_11760	COG1355	regulation of microtubule-based process
CJ010_11765	COG3174	membrane
CJ010_11770	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CJ010_11775	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CJ010_11790	COG3228	Belongs to the MtfA family
CJ010_11805	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CJ010_11810	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CJ010_11815	COG0248	Ppx GppA phosphatase
CJ010_11820	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CJ010_11825	COG1127	ABC transporter
CJ010_11840	COG0318	PFAM AMP-dependent synthetase and ligase
CJ010_11850	COG0084	hydrolase, TatD family'
CJ010_11855	COG1309	transcriptional regulator
CJ010_11875	COG1960	acyl-CoA dehydrogenase activity
CJ010_11880	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CJ010_11890	COG2350	Protein conserved in bacteria
CJ010_11895	COG2917	probably involved in intracellular septation
CJ010_11910	COG0745	RESPONSE REGULATOR receiver
CJ010_11915	COG1214	PFAM Peptidase M22, glycoprotease
CJ010_11920	COG0456	acetyltransferase
CJ010_11925	COG1573	uracil-dna glycosylase
CJ010_11930	COG0477	Major facilitator Superfamily
CJ010_11935	COG0583	DNA-binding transcription factor activity
CJ010_11945	COG0583	DNA-binding transcription factor activity
CJ010_11950	COG1760	l-serine dehydratase
CJ010_11955	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
CJ010_11965	COG0346	lactoylglutathione lyase activity
CJ010_11970	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CJ010_11975	COG0148	phosphopyruvate hydratase activity
CJ010_11980	COG1012	belongs to the aldehyde dehydrogenase family
CJ010_11990	COG2017	converts alpha-aldose to the beta-anomer
CJ010_11995	COG0800	Aldolase
CJ010_12005	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CJ010_12010	COG0363	glucosamine-6-phosphate deaminase activity
CJ010_12015	COG1737	Transcriptional regulator
CJ010_12020	COG0166	Belongs to the GPI family
CJ010_12025	COG0673	inositol 2-dehydrogenase activity
CJ010_12035	COG1879	ABC-type sugar transport system periplasmic component
CJ010_12040	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ010_12055	COG0837	glucose binding
CJ010_12060	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CJ010_12065	COG0837	glucose binding
CJ010_12065	COG1737	Transcriptional regulator
CJ010_12085	COG0366	Alpha amylase catalytic
CJ010_12090	COG1653	transport
CJ010_12120	COG0583	DNA-binding transcription factor activity
CJ010_12125	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_12130	COG4221	oxidoreductase activity
CJ010_12135	COG2814	Major facilitator Superfamily
CJ010_12170	COG0840	transmembrane signaling receptor activity
CJ010_12225	COG2801	Transposase and inactivated derivatives
CJ010_12265	COG4569	acetaldehyde dehydrogenase (acetylating) activity
CJ010_12270	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CJ010_12305	COG2267	carboxylic ester hydrolase activity
CJ010_12310	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_12320	COG0564	pseudouridine synthase activity
CJ010_12335	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CJ010_12380	COG1562	ergosterol biosynthetic process
CJ010_12390	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CJ010_12395	COG2866	Carboxypeptidase
CJ010_12400	COG3022	response to hydroperoxide
CJ010_12410	COG0156	8-amino-7-oxononanoate synthase activity
CJ010_12415	COG2267	carboxylic ester hydrolase activity
CJ010_12420	COG2226	methyltransferase
CJ010_12425	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CJ010_12430	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CJ010_12440	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CJ010_12445	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CJ010_12450	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CJ010_12455	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CJ010_12460	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CJ010_12480	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CJ010_12490	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CJ010_12495	COG0233	cytoplasmic translational termination
CJ010_12500	COG0528	UMP kinase activity
CJ010_12505	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CJ010_12510	COG0052	Belongs to the universal ribosomal protein uS2 family
CJ010_12515	COG0024	Methionine aminopeptidase
CJ010_12520	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CJ010_12525	COG2862	Uncharacterized protein family, UPF0114
CJ010_12530	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
CJ010_12535	COG2204	response regulator
CJ010_12560	COG0579	oxidoreductase
CJ010_12580	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CJ010_12585	COG1960	acyl-CoA dehydrogenase activity
CJ010_12590	COG0583	DNA-binding transcription factor activity
CJ010_12605	COG1024	Enoyl-CoA hydratase
CJ010_12620	COG1960	acyl-CoA dehydrogenase activity
CJ010_12625	COG1960	acyl-CoA dehydrogenase activity
CJ010_12630	COG1024	Enoyl-CoA hydratase
CJ010_12645	COG1846	Transcriptional regulator
CJ010_12665	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CJ010_12670	COG2354	Protein conserved in bacteria
CJ010_12685	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CJ010_12690	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ010_12700	COG1763	Mo-molybdopterin cofactor biosynthetic process
CJ010_12705	COG0243	molybdopterin cofactor binding
CJ010_12710	COG0437	4 iron, 4 sulfur cluster binding
CJ010_12745	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_12775	COG0633	Ferredoxin
CJ010_12775	COG0543	2 iron, 2 sulfur cluster binding
CJ010_12785	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CJ010_12820	COG1802	Transcriptional regulator
CJ010_12830	COG1063	alcohol dehydrogenase
CJ010_12835	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CJ010_12840	COG4569	acetaldehyde dehydrogenase (acetylating) activity
CJ010_12845	COG3971	2-oxopent-4-enoate hydratase activity
CJ010_12850	COG3384	dioxygenase
CJ010_12855	COG0596	Alpha beta hydrolase
CJ010_12855	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJ010_12865	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
CJ010_12890	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CJ010_12895	COG0318	PFAM AMP-dependent synthetase and ligase
CJ010_12910	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
CJ010_12915	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_12930	COG0411	ABC transporter
CJ010_12940	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CJ010_12970	COG0411	ABC transporter
CJ010_13005	COG0300	oxidoreductase activity
CJ010_13020	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CJ010_13030	COG1196	nuclear chromosome segregation
CJ010_13040	COG2171	N-acyltransferase activity
CJ010_13050	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CJ010_13060	COG0784	Response regulator, receiver
CJ010_13070	COG0633	Ferredoxin
CJ010_13075	COG0443	Heat shock 70 kDa protein
CJ010_13080	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CJ010_13085	COG0316	Belongs to the HesB IscA family
CJ010_13090	COG0822	iron-sulfur transferase activity
CJ010_13095	COG1104	cysteine desulfurase activity
CJ010_13100	COG1104	cysteine desulfurase activity
CJ010_13110	COG1045	serine acetyltransferase
CJ010_13125	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CJ010_13135	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CJ010_13140	COG0328	RNA-DNA hybrid ribonuclease activity
CJ010_13145	COG2226	methyltransferase
CJ010_13150	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ010_13160	COG3706	GGDEF domain
CJ010_13160	COG5001	Diguanylate cyclase
CJ010_13160	COG4251	negative regulation of phosphorylation
CJ010_13160	COG2203	Gaf domain
CJ010_13165	COG1388	LysM domain
CJ010_13165	COG0741	lytic transglycosylase activity
CJ010_13180	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CJ010_13185	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CJ010_13195	COG0534	Mate efflux family protein
CJ010_13200	COG1393	Belongs to the ArsC family
CJ010_13235	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CJ010_13240	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CJ010_13245	COG0740	serine-type endopeptidase activity
CJ010_13250	COG0544	peptidyl-prolyl cis-trans isomerase activity
CJ010_13255	COG2766	serine protein kinase
CJ010_13260	COG2718	Belongs to the UPF0229 family
CJ010_13265	COG2719	SpoVR family
CJ010_13270	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CJ010_13270	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CJ010_13300	COG0436	Aminotransferase
CJ010_13340	COG1450	Type ii and iii secretion system protein
CJ010_13365	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CJ010_13370	COG1459	type II secretion system
CJ010_13375	COG2165	general secretion pathway protein
CJ010_13380	COG0739	heme binding
CJ010_13380	COG0741	lytic transglycosylase activity
CJ010_13380	COG1196	nuclear chromosome segregation
CJ010_13405	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CJ010_13425	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CJ010_13430	COG1185	polyribonucleotide nucleotidyltransferase activity
CJ010_13435	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CJ010_13440	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CJ010_13445	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CJ010_13450	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CJ010_13455	COG0195	Participates in both transcription termination and antitermination
CJ010_13455	COG2251	uridine kinase activity
CJ010_13460	COG0779	Required for maturation of 30S ribosomal subunits
CJ010_13465	COG1187	pseudouridine synthase activity
CJ010_13470	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CJ010_13475	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CJ010_13480	COG1994	Peptidase M50
CJ010_13485	COG0009	L-threonylcarbamoyladenylate synthase
CJ010_13490	COG0613	PHP domain protein
CJ010_13505	COG1012	belongs to the aldehyde dehydrogenase family
CJ010_13515	COG1278	Cold shock
CJ010_13520	COG0513	Belongs to the DEAD box helicase family
CJ010_13540	COG4681	YaeQ
CJ010_13555	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CJ010_13565	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CJ010_13570	COG0302	gtp cyclohydrolase
CJ010_13580	COG0306	phosphate transporter
CJ010_13590	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CJ010_13610	COG0791	NLP P60 protein
CJ010_13615	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CJ010_13615	COG0517	IMP dehydrogenase activity
CJ010_13620	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CJ010_13625	COG0148	phosphopyruvate hydratase activity
CJ010_13630	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CJ010_13635	COG0504	CTP synthase activity
CJ010_13645	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJ010_13650	COG0824	Thioesterase
CJ010_13665	COG4774	siderophore transport
CJ010_13700	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CJ010_13700	COG0047	phosphoribosylformylglycinamidine synthase activity
CJ010_13715	COG0463	Glycosyl transferase, family 2
CJ010_13740	COG0739	heme binding
CJ010_13750	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CJ010_13760	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CJ010_13765	COG0840	transmembrane signaling receptor activity
CJ010_13770	COG0183	Belongs to the thiolase family
CJ010_13775	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
CJ010_13780	COG0494	nUDIX hydrolase
CJ010_13805	COG4969	Belongs to the N-Me-Phe pilin family
CJ010_13835	COG1666	GTP binding
CJ010_13840	COG3123	guanosine phosphorylase activity
CJ010_13850	COG0137	argininosuccinate synthase activity
CJ010_13855	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CJ010_13860	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CJ010_13870	COG0268	Binds directly to 16S ribosomal RNA
CJ010_13875	COG0728	peptidoglycan biosynthetic process
CJ010_13880	COG1881	PFAM PEBP family protein
CJ010_13895	COG2154	pterin-4-alpha-carbinolamine dehydratase
CJ010_13905	COG2081	HI0933 family
CJ010_13915	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CJ010_13920	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CJ010_13925	COG0840	transmembrane signaling receptor activity
CJ010_13945	COG0791	NLP P60 protein
CJ010_13955	COG1840	ABC-type Fe3 transport system, periplasmic component
CJ010_13960	COG1178	ABC-type Fe3 transport system permease component
CJ010_13965	COG3842	ATPase activity
CJ010_13970	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
CJ010_13975	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
CJ010_13980	COG0167	dihydroorotate dehydrogenase activity
CJ010_14035	COG0310	cobalt ion transport
CJ010_14040	COG0310	cobalt ion transport
CJ010_14050	COG1122	ATPase activity
CJ010_14055	COG0402	S-adenosylhomocysteine deaminase activity
CJ010_14060	COG1671	Belongs to the UPF0178 family
CJ010_14070	COG4191	Histidine kinase
CJ010_14080	COG3852	Histidine kinase
CJ010_14105	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ010_14125	COG0745	RESPONSE REGULATOR receiver
CJ010_14145	COG4566	intracellular signal transduction
CJ010_14155	COG4771	TonB-dependent receptor
CJ010_14170	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CJ010_14195	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CJ010_14200	COG0438	transferase activity, transferring glycosyl groups
CJ010_14220	COG3206	protein involved in exopolysaccharide biosynthesis
CJ010_14220	COG0489	protein tyrosine kinase activity
CJ010_14250	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CJ010_14260	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ010_14265	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ010_14280	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ010_14295	COG1012	belongs to the aldehyde dehydrogenase family
CJ010_14310	COG2409	Drug exporters of the RND superfamily
CJ010_14335	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CJ010_14345	COG3391	amine dehydrogenase activity
CJ010_14370	COG0765	amino acid transport
CJ010_14375	COG1126	abc transporter atp-binding protein
CJ010_14390	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CJ010_14405	COG0697	spore germination
CJ010_14425	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CJ010_14435	COG3158	transport of potassium into the cell
CJ010_14445	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CJ010_14450	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CJ010_14455	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
CJ010_14470	COG0745	RESPONSE REGULATOR receiver
CJ010_14475	COG2205	protein histidine kinase activity
CJ010_14480	COG3706	GGDEF domain
CJ010_14490	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJ010_14520	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CJ010_14525	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CJ010_14530	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CJ010_14545	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CJ010_14570	COG0583	DNA-binding transcription factor activity
CJ010_14575	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CJ010_14585	COG2351	hydroxyisourate hydrolase activity
CJ010_14590	COG2351	hydroxyisourate hydrolase activity
CJ010_14610	COG0582	viral genome integration into host DNA
CJ010_14685	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CJ010_14685	COG0517	IMP dehydrogenase activity
CJ010_14695	COG1252	NADH dehydrogenase
CJ010_14705	COG2169	Transcriptional regulator
CJ010_14705	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CJ010_14720	COG3040	lipid binding
CJ010_14750	COG4941	Belongs to the sigma-70 factor family
CJ010_14775	COG2154	pterin-4-alpha-carbinolamine dehydratase
CJ010_14790	COG1960	acyl-CoA dehydrogenase activity
CJ010_14800	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CJ010_14810	COG2963	transposase activity
CJ010_14830	COG0366	Alpha amylase catalytic
CJ010_14840	COG4178	(ABC) transporter
CJ010_14855	COG1132	(ABC) transporter
CJ010_14890	COG0438	transferase activity, transferring glycosyl groups
CJ010_14895	COG0726	polysaccharide deacetylase
CJ010_14900	COG1012	belongs to the aldehyde dehydrogenase family
CJ010_14915	COG3284	Transcriptional regulator
CJ010_14940	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CJ010_14965	COG1116	anion transmembrane transporter activity
CJ010_14970	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ010_14975	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ010_14980	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ010_14985	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ010_15000	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ010_15005	COG1116	anion transmembrane transporter activity
CJ010_15010	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ010_15040	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CJ010_15060	COG4251	negative regulation of phosphorylation
CJ010_15060	COG2203	Gaf domain
CJ010_15060	COG3706	GGDEF domain
CJ010_15060	COG5001	Diguanylate cyclase
CJ010_15075	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
CJ010_15090	COG1522	sequence-specific DNA binding
CJ010_15095	COG3706	GGDEF domain
CJ010_15100	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CJ010_15105	COG5002	protein histidine kinase activity
CJ010_15105	COG2176	DNA-directed DNA polymerase activity
CJ010_15110	COG0745	RESPONSE REGULATOR receiver
CJ010_15115	COG5002	protein histidine kinase activity
CJ010_15125	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJ010_15145	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CJ010_15165	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CJ010_15175	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CJ010_15205	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CJ010_15210	COG4569	acetaldehyde dehydrogenase (acetylating) activity
CJ010_15215	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_15235	COG1802	Transcriptional regulator
CJ010_15285	COG0318	PFAM AMP-dependent synthetase and ligase
CJ010_15310	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_15335	COG0683	leucine binding
CJ010_15350	COG0411	ABC transporter
CJ010_15360	COG1012	belongs to the aldehyde dehydrogenase family
CJ010_15370	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ010_15380	COG2205	protein histidine kinase activity
CJ010_15380	COG2202	Pas domain
CJ010_15405	COG0028	Belongs to the TPP enzyme family
CJ010_15410	COG0583	DNA-binding transcription factor activity
CJ010_15420	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CJ010_15430	COG1271	oxidase subunit
CJ010_15435	COG1294	oxidase, subunit
CJ010_15450	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ010_15475	COG2144	transferase activity, transferring acyl groups
CJ010_15490	COG2072	flavoprotein involved in K transport
CJ010_15520	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CJ010_15540	COG3436	PFAM IS66 Orf2 family protein
CJ010_15545	COG4372	Transposase
CJ010_15570	COG1027	Aspartate ammonia-lyase
CJ010_15575	COG1301	dicarboxylic acid transport
CJ010_15590	COG1902	pentaerythritol trinitrate reductase activity
CJ010_15590	COG0446	pyridine nucleotide-disulphide oxidoreductase
CJ010_15605	COG1216	Glycosyl transferase, family 2
CJ010_15630	COG3220	belongs to the UPF0276 family
CJ010_15655	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CJ010_15675	COG0490	domain, Protein
CJ010_15675	COG0471	metal ion transport
CJ010_15700	COG1960	acyl-CoA dehydrogenase activity
CJ010_15715	COG0183	Belongs to the thiolase family
CJ010_15720	COG1024	Enoyl-CoA hydratase
CJ010_15735	COG0411	ABC transporter
CJ010_15745	COG1309	transcriptional regulator
CJ010_15755	COG2409	Drug exporters of the RND superfamily
CJ010_15775	COG3474	cytochrome
CJ010_15795	COG0306	phosphate transporter
CJ010_15800	COG0431	NADPH-dependent FMN reductase
CJ010_15805	COG0798	PFAM Bile acid sodium symporter
CJ010_15815	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CJ010_15825	COG0640	Transcriptional regulator
CJ010_15835	COG2375	cellular response to nickel ion
CJ010_15840	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CJ010_15925	COG0583	DNA-binding transcription factor activity
CJ010_15930	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CJ010_15935	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CJ010_15945	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_15950	COG1053	succinate dehydrogenase
CJ010_15960	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_15975	COG2124	cytochrome p450
CJ010_16015	COG1294	oxidase, subunit
CJ010_16035	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CJ010_16050	COG0667	Aldo Keto reductase
CJ010_16085	COG2159	amidohydrolase
CJ010_16095	COG2814	Major facilitator Superfamily
CJ010_16100	COG0583	DNA-binding transcription factor activity
CJ010_16115	COG2837	iron assimilation
CJ010_16120	COG0617	tRNA 3'-terminal CCA addition
CJ010_16130	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CJ010_16195	COG1628	Protein of unknown function DUF99
CJ010_16200	COG2207	Transcriptional regulator
CJ010_16215	COG1595	DNA-templated transcription, initiation
CJ010_16230	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ010_16270	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CJ010_16275	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CJ010_16280	COG0735	belongs to the Fur family
CJ010_16285	COG0497	DNA recombination
CJ010_16290	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CJ010_16295	COG1420	regulation of RNA biosynthetic process
CJ010_16300	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CJ010_16305	COG1950	PFAM Membrane protein of
CJ010_16315	COG0515	serine threonine protein kinase
CJ010_16315	COG2815	serine threonine protein kinase
CJ010_16320	COG0402	S-adenosylhomocysteine deaminase activity
CJ010_16330	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CJ010_16340	COG1132	(ABC) transporter
CJ010_16350	COG1228	amidohydrolase
CJ010_16355	COG0010	Belongs to the arginase family
CJ010_16395	COG1858	cytochrome C peroxidase
CJ010_16400	COG1858	cytochrome C peroxidase
CJ010_16425	COG0583	DNA-binding transcription factor activity
CJ010_16430	COG2828	Protein conserved in bacteria
CJ010_16450	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
CJ010_16470	COG0583	DNA-binding transcription factor activity
CJ010_16475	COG1053	succinate dehydrogenase
CJ010_16490	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CJ010_16495	COG2828	Protein conserved in bacteria
CJ010_16530	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CJ010_16540	COG0596	Alpha beta hydrolase
CJ010_16560	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_16565	COG0028	Belongs to the TPP enzyme family
CJ010_16580	COG0583	DNA-binding transcription factor activity
CJ010_16600	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CJ010_16605	COG0235	Class ii aldolase
CJ010_16615	COG3485	protocatechuate 3,4-dioxygenase
CJ010_16640	COG3971	2-oxopent-4-enoate hydratase activity
CJ010_16650	COG3384	dioxygenase
CJ010_16655	COG1012	belongs to the aldehyde dehydrogenase family
CJ010_16665	COG0179	Fumarylacetoacetate (FAA) hydrolase
CJ010_16680	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CJ010_16685	COG1846	Transcriptional regulator
CJ010_16705	COG5002	protein histidine kinase activity
CJ010_16705	COG5001	Diguanylate cyclase
CJ010_16705	COG3447	MASE1 domain protein
CJ010_16725	COG4191	Histidine kinase
CJ010_16730	COG4566	intracellular signal transduction
CJ010_16745	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CJ010_16760	COG0784	Response regulator, receiver
CJ010_16760	COG2205	protein histidine kinase activity
CJ010_16770	COG0546	phosphoglycolate phosphatase activity
CJ010_16775	COG3706	GGDEF domain
CJ010_16775	COG0745	RESPONSE REGULATOR receiver
CJ010_16785	COG2226	methyltransferase
CJ010_16815	COG2801	Transposase and inactivated derivatives
CJ010_16855	COG1429	ligase activity, forming nitrogen-metal bonds
CJ010_16870	COG4106	trans-aconitate 2-methyltransferase activity
CJ010_16885	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CJ010_16890	COG0412	Dienelactone hydrolase
CJ010_16910	COG1335	isochorismatase
CJ010_16935	COG3258	Cytochrome c
CJ010_16960	COG1959	2 iron, 2 sulfur cluster binding
CJ010_16965	COG0719	Fe-S assembly protein
CJ010_16970	COG0396	ATPase activity
CJ010_16975	COG0719	Fe-S assembly protein
CJ010_16980	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CJ010_16985	COG0822	iron-sulfur transferase activity
CJ010_17000	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
CJ010_17010	COG2814	Major facilitator Superfamily
CJ010_17015	COG0583	DNA-binding transcription factor activity
CJ010_17030	COG1742	UPF0060 membrane protein
CJ010_17075	COG1960	acyl-CoA dehydrogenase activity
CJ010_17080	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
CJ010_17095	COG0450	alkyl hydroperoxide reductase
CJ010_17115	COG3038	cytochrome b561
CJ010_17125	COG0121	glutamine amidotransferase
CJ010_17130	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CJ010_17135	COG2011	ABC-type metal ion transport system permease component
CJ010_17145	COG0400	carboxylic ester hydrolase activity
CJ010_17155	COG0640	Transcriptional regulator
CJ010_17160	COG1902	pentaerythritol trinitrate reductase activity
CJ010_17180	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CJ010_17195	COG1987	bacterial-type flagellum assembly
CJ010_17215	COG1256	bacterial-type flagellum assembly
CJ010_17220	COG3951	Flagellar rod assembly protein muramidase FlgJ
CJ010_17220	COG1705	Flagellar rod assembly protein muramidase FlgJ
CJ010_17225	COG1706	bacterial-type flagellum-dependent cell motility
CJ010_17230	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
CJ010_17235	COG4786	Flagellar basal body rod
CJ010_17240	COG4787	bacterial-type flagellum-dependent cell motility
CJ010_17245	COG1749	Flagellar hook protein flgE
CJ010_17255	COG1558	bacterial-type flagellum-dependent cell motility
CJ010_17260	COG1815	bacterial-type flagellum-dependent cell motility
CJ010_17285	COG0745	RESPONSE REGULATOR receiver
CJ010_17290	COG2205	protein histidine kinase activity
CJ010_17300	COG5001	Diguanylate cyclase
CJ010_17305	COG2197	response regulator
CJ010_17310	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CJ010_17315	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CJ010_17335	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CJ010_17340	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CJ010_17345	COG0739	heme binding
CJ010_17350	COG0316	Belongs to the HesB IscA family
CJ010_17360	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CJ010_17365	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CJ010_17370	COG1765	OsmC-like protein
CJ010_17375	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
CJ010_17395	COG1592	Rubrerythrin
CJ010_17405	COG0494	nUDIX hydrolase
CJ010_17410	COG0442	prolyl-tRNA aminoacylation
CJ010_17415	COG0741	lytic transglycosylase activity
CJ010_17425	COG2205	protein histidine kinase activity
CJ010_17435	COG2204	response regulator
CJ010_17445	COG0482	sulfurtransferase activity
CJ010_17475	COG0429	hydrolase of the alpha beta-hydrolase fold
CJ010_17490	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CJ010_17495	COG2096	Adenosyltransferase
CJ010_17500	COG0535	radical SAM domain protein
CJ010_17515	COG1132	(ABC) transporter
CJ010_17525	COG1322	Protein conserved in bacteria
CJ010_17530	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CJ010_17540	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CJ010_17545	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
CJ010_17550	COG0521	Mo-molybdopterin cofactor biosynthetic process
CJ010_17555	COG3028	Belongs to the UPF0307 family
CJ010_17560	COG0312	modulator of DNA gyrase
CJ010_17565	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CJ010_17570	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CJ010_17585	COG2205	protein histidine kinase activity
CJ010_17590	COG0745	RESPONSE REGULATOR receiver
CJ010_17595	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CJ010_17600	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CJ010_17605	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CJ010_17605	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CJ010_17620	COG0793	Belongs to the peptidase S41A family
CJ010_17630	COG0588	phosphoglycerate mutase activity
CJ010_17635	COG0640	Transcriptional regulator
CJ010_17640	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJ010_17650	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
CJ010_17660	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CJ010_17665	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CJ010_17670	COG1040	competence protein
CJ010_17675	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CJ010_17680	COG2226	methyltransferase
CJ010_17700	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CJ010_17710	COG2833	Protein of unknown function (DUF455)
CJ010_17715	COG0303	'Molybdopterin
CJ010_17720	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CJ010_17730	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
CJ010_17735	COG3447	MASE1 domain protein
CJ010_17735	COG5002	protein histidine kinase activity
CJ010_17735	COG5001	Diguanylate cyclase
CJ010_17740	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CJ010_17740	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CJ010_17750	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CJ010_17755	COG0483	inositol monophosphate 1-phosphatase activity
CJ010_17770	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CJ010_17775	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CJ010_17785	COG0126	phosphoglycerate kinase activity
CJ010_17790	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CJ010_17800	COG0469	pyruvate kinase activity
CJ010_17820	COG0477	Major facilitator Superfamily
CJ010_17835	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CJ010_17845	COG1595	DNA-templated transcription, initiation
CJ010_17860	COG1120	ATPase activity
CJ010_17865	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ010_17890	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_17895	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CJ010_17905	COG3433	isochorismatase activity
CJ010_17905	COG1535	isochorismatase
CJ010_17910	COG1021	2,3-dihydroxybenzoate-AMP ligase
CJ010_17915	COG1169	isochorismate synthase
CJ010_17930	COG2304	oxidoreductase activity
CJ010_17940	COG0714	Associated with various cellular activities
CJ010_17945	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CJ010_17950	COG2304	oxidoreductase activity
CJ010_17955	COG1301	dicarboxylic acid transport
CJ010_17960	COG0583	DNA-binding transcription factor activity
CJ010_17975	COG0583	DNA-binding transcription factor activity
CJ010_17980	COG3384	dioxygenase
CJ010_17985	COG3038	cytochrome b561
CJ010_17995	COG2353	YceI-like domain
CJ010_18005	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CJ010_18020	COG0339	signal peptide processing
CJ010_18030	COG0004	ammonium transporteR
CJ010_18035	COG3833	ABC-type maltose transport systems, permease component
CJ010_18040	COG1176	ABC-type spermidine putrescine transport system, permease component I
CJ010_18050	COG3842	ATPase activity
CJ010_18055	COG1802	Transcriptional regulator
CJ010_18070	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CJ010_18080	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CJ010_18085	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CJ010_18090	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CJ010_18095	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CJ010_18110	COG0006	proline dipeptidase activity
CJ010_18115	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CJ010_18125	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
CJ010_18130	COG0138	bifunctional purine biosynthesis protein purh
CJ010_18135	COG0151	Belongs to the GarS family
CJ010_18140	COG0408	coproporphyrinogen oxidase activity
CJ010_18150	COG0228	four-way junction DNA binding
CJ010_18155	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CJ010_18160	COG0336	Belongs to the RNA methyltransferase TrmD family
CJ010_18165	COG0335	large ribosomal subunit rRNA binding
CJ010_18175	COG0795	lipopolysaccharide-transporting ATPase activity
CJ010_18180	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CJ010_18195	COG0525	valine-tRNA ligase activity
CJ010_18235	COG0842	Transport permease protein
CJ010_18240	COG1129	ABC transporter
CJ010_18240	COG0842	Transport permease protein
CJ010_18245	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ010_18255	COG0425	Belongs to the sulfur carrier protein TusA family
CJ010_18260	COG4783	chaperone-mediated protein folding
CJ010_18265	COG0315	cyclic pyranopterin monophosphate synthase activity
CJ010_18275	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CJ010_18305	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CJ010_18310	COG2414	aldehyde ferredoxin oxidoreductase
CJ010_18320	COG3284	Transcriptional regulator
CJ010_18345	COG4654	Cytochrome c, class I
CJ010_18355	COG1012	belongs to the aldehyde dehydrogenase family
CJ010_18385	COG2226	methyltransferase
CJ010_18395	COG2205	protein histidine kinase activity
CJ010_18420	COG2132	Multicopper oxidase
CJ010_18425	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
CJ010_18440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ010_18445	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ010_18460	COG2226	methyltransferase
CJ010_18510	COG1741	Belongs to the pirin family
CJ010_18515	COG2259	Doxx family
CJ010_18520	COG0583	DNA-binding transcription factor activity
CJ010_18525	COG0655	NAD(P)H dehydrogenase (quinone) activity
CJ010_18535	COG2197	response regulator
CJ010_18580	COG3851	Histidine kinase
CJ010_18605	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
CJ010_18640	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CJ010_18650	COG4106	trans-aconitate 2-methyltransferase activity
CJ010_18665	COG1335	isochorismatase
CJ010_18675	COG0583	DNA-binding transcription factor activity
CJ010_18710	COG3108	Peptidase M15
CJ010_18715	COG2989	Protein conserved in bacteria
CJ010_18750	COG1012	belongs to the aldehyde dehydrogenase family
CJ010_18760	COG4772	TonB-dependent receptor
CJ010_18815	COG3383	formate dehydrogenase (NAD+) activity
CJ010_18825	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ010_18835	COG0604	alcohol dehydrogenase
CJ010_18835	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_18835	COG3321	synthase
CJ010_18840	COG1024	Enoyl-CoA hydratase
CJ010_18860	COG0411	ABC transporter
CJ010_18865	COG4214	carbohydrate transport
CJ010_18900	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CJ010_18920	COG0183	Belongs to the thiolase family
CJ010_18955	COG0318	PFAM AMP-dependent synthetase and ligase
CJ010_18975	COG1024	Enoyl-CoA hydratase
CJ010_18975	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ010_18980	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CJ010_19005	COG2801	Transposase and inactivated derivatives
CJ010_19055	COG1960	acyl-CoA dehydrogenase activity
CJ010_19065	COG3094	Invasion gene expression up-regulator, SirB
CJ010_19090	COG2010	Cytochrome c
CJ010_19110	COG3158	transport of potassium into the cell
CJ010_19115	COG0745	RESPONSE REGULATOR receiver
CJ010_19120	COG2205	protein histidine kinase activity
CJ010_19170	COG1959	2 iron, 2 sulfur cluster binding
CJ010_19180	COG3245	cytochrome
CJ010_19185	COG3604	Transcriptional regulator
CJ010_19240	COG4263	nitrous-oxide reductase activity
CJ010_19255	COG0527	aspartate kinase activity
CJ010_19270	COG0720	synthase
CJ010_19280	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
CJ010_19280	COG3264	Mechanosensitive ion channel
CJ010_19290	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CJ010_19290	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CJ010_19300	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CJ010_19310	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CJ010_19330	COG1793	dna ligase
CJ010_19335	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CJ010_19350	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ010_19355	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ010_19360	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CJ010_19365	COG0628	permease
CJ010_19375	COG0560	Phosphoserine phosphatase
CJ010_19380	COG0617	tRNA 3'-terminal CCA addition
CJ010_19395	COG1428	Deoxynucleoside kinase
CJ010_19400	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CJ010_19405	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CJ010_19410	COG0516	GMP reductase activity
CJ010_19410	COG0517	IMP dehydrogenase activity
CJ010_19415	COG0308	aminopeptidase N
CJ010_19450	COG0028	Belongs to the TPP enzyme family
CJ010_19455	COG0440	acetolactate synthase activity
CJ010_19460	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CJ010_19465	COG1183	phosphatidylcholine synthase activity
CJ010_19475	COG0784	Response regulator, receiver
CJ010_19475	COG2205	protein histidine kinase activity
CJ010_19475	COG2198	Histidine kinase
CJ010_19485	COG3642	lipopolysaccharide core region biosynthetic process
CJ010_19490	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CJ010_19505	COG1295	ribonuclease BN
CJ010_19515	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CJ010_19520	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CJ010_19525	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CJ010_19530	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CJ010_19555	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CJ010_19585	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJ010_19595	COG0604	alcohol dehydrogenase
CJ010_19605	COG1704	LemA family
CJ010_19635	COG0741	lytic transglycosylase activity
CJ010_19635	COG0739	heme binding
CJ010_19635	COG1196	nuclear chromosome segregation
CJ010_19650	COG2204	response regulator
CJ010_19655	COG4191	Histidine kinase
CJ010_19660	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CJ010_19670	COG2030	dehydratase
CJ010_19700	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CJ010_19710	COG1982	Orn Lys Arg decarboxylase major
CJ010_19715	COG0717	Belongs to the dCTP deaminase family
CJ010_19720	COG0489	protein tyrosine kinase activity
CJ010_19725	COG2885	chlorophyll binding
CJ010_19725	COG3047	cAMP biosynthetic process
CJ010_19730	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CJ010_19730	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CJ010_19735	COG0659	secondary active sulfate transmembrane transporter activity
CJ010_19740	COG1254	Belongs to the acylphosphatase family
CJ010_19745	COG1368	sulfuric ester hydrolase activity
CJ010_19770	COG0280	phosphate acetyltransferase
CJ010_19770	COG0281	malic enzyme
CJ010_19775	COG1192	Involved in chromosome partitioning
CJ010_19780	COG0210	DNA helicase
CJ010_19790	COG0495	leucyl-tRNA aminoacylation
CJ010_19800	COG1466	dna polymerase III delta subunit
CJ010_19805	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CJ010_19810	COG4974	Belongs to the 'phage' integrase family
CJ010_19815	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CJ010_19830	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CJ010_19835	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CJ010_19840	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CJ010_19850	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CJ010_19885	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CJ010_19920	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CJ010_19925	COG2204	response regulator
CJ010_19940	COG0071	Belongs to the small heat shock protein (HSP20) family
CJ010_19945	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CJ010_19990	COG1216	Glycosyl transferase, family 2
CJ010_19990	COG0438	transferase activity, transferring glycosyl groups
CJ010_20000	COG0463	Glycosyl transferase, family 2
CJ010_20010	COG0367	asparagine synthase
CJ010_20020	COG2244	polysaccharide biosynthetic process
CJ010_20025	COG0297	glycogen (starch) synthase activity
CJ010_20025	COG0438	transferase activity, transferring glycosyl groups
CJ010_20030	COG2327	Polysaccharide pyruvyl transferase
CJ010_20040	COG1216	Glycosyl transferase, family 2
CJ010_20045	COG1215	transferase activity, transferring glycosyl groups
CJ010_20060	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
CJ010_20065	COG0438	transferase activity, transferring glycosyl groups
CJ010_20080	COG0367	asparagine synthase
CJ010_20085	COG0438	transferase activity, transferring glycosyl groups
CJ010_20115	COG3409	Peptidoglycan-binding domain 1 protein
CJ010_20115	COG3267	Type II secretory pathway component ExeA
CJ010_20125	COG0489	protein tyrosine kinase activity
CJ010_20145	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CJ010_20165	COG1999	signal sequence binding
CJ010_20170	COG0109	protoheme IX farnesyltransferase activity
CJ010_20175	COG1612	heme a metabolic process
CJ010_20205	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
CJ010_20210	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CJ010_20220	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CJ010_20255	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CJ010_20275	COG0300	oxidoreductase activity
CJ010_20285	COG0604	alcohol dehydrogenase
CJ010_20290	COG1309	transcriptional regulator
CJ010_20310	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CJ010_20320	COG0134	indole-3-glycerol-phosphate synthase activity
CJ010_20325	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CJ010_20340	COG0546	phosphoglycolate phosphatase activity
CJ010_20350	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CJ010_20355	COG1234	tRNA 3'-trailer cleavage
CJ010_20370	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CJ010_20375	COG0045	succinate-CoA ligase (ADP-forming) activity
CJ010_20390	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CJ010_20405	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CJ010_20410	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CJ010_20420	COG0140	phosphoribosyl-ATP diphosphatase activity
CJ010_20425	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CJ010_20430	COG0107	imidazoleglycerol-phosphate synthase activity
CJ010_20435	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CJ010_20440	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CJ010_20445	COG0131	Imidazoleglycerol-phosphate dehydratase
CJ010_20450	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CJ010_20455	COG0741	lytic transglycosylase activity
CJ010_20460	COG3023	N-Acetylmuramoyl-L-alanine amidase
CJ010_20470	COG1131	(ABC) transporter
CJ010_20515	COG0436	Aminotransferase
CJ010_20520	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
CJ010_20525	COG0235	Class ii aldolase
CJ010_20535	COG2084	Dehydrogenase
CJ010_20540	COG2084	Dehydrogenase
CJ010_20545	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CJ010_20565	COG3411	Ferredoxin
CJ010_20575	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CJ010_20585	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CJ010_20620	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CJ010_20635	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CJ010_20650	COG4251	negative regulation of phosphorylation
CJ010_20660	COG0629	single-stranded DNA binding
CJ010_20665	COG2814	Major facilitator Superfamily
CJ010_20680	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CJ010_20685	COG0203	ribosomal protein L17
CJ010_20690	COG0202	RNA polymerase activity
CJ010_20695	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CJ010_20700	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CJ010_20705	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CJ010_20710	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CJ010_20715	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CJ010_20720	COG0201	protein transport
CJ010_20725	COG0200	Binds to the 23S rRNA
CJ010_20730	COG1841	ribosomal large subunit assembly
CJ010_20735	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CJ010_20740	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CJ010_20745	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CJ010_20750	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CJ010_20755	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CJ010_20760	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CJ010_20765	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CJ010_20770	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CJ010_20775	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CJ010_20780	COG0255	Belongs to the universal ribosomal protein uL29 family
CJ010_20785	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CJ010_20790	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CJ010_20795	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CJ010_20800	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CJ010_20805	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CJ010_20810	COG0089	rRNA binding
CJ010_20815	COG0088	Forms part of the polypeptide exit tunnel
CJ010_20820	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CJ010_20825	COG0051	transcription antitermination factor activity, RNA binding
CJ010_20830	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CJ010_20835	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CJ010_20840	COG0049	tRNA binding
CJ010_20845	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CJ010_20850	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CJ010_20855	COG0085	RNA polymerase activity
CJ010_20860	COG0222	ribosome binding
CJ010_20865	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CJ010_20870	COG0081	regulation of translation
CJ010_20875	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CJ010_20885	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CJ010_20895	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CJ010_20915	COG0277	FAD linked oxidase domain protein
CJ010_20935	COG2197	response regulator
CJ010_20945	COG2198	Histidine kinase
CJ010_20945	COG2205	protein histidine kinase activity
CJ010_20945	COG0784	Response regulator, receiver
CJ010_20980	COG0559	Belongs to the binding-protein-dependent transport system permease family
CJ010_20990	COG1022	Amp-dependent synthetase and ligase
CJ010_21000	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CJ010_21005	COG0352	thiamine-phosphate diphosphorylase activity
CJ010_21010	COG0351	phosphomethylpyrimidine kinase
CJ010_21035	COG0840	transmembrane signaling receptor activity
CJ010_21045	COG0415	Belongs to the DNA photolyase family
CJ010_21050	COG1678	Uncharacterized ACR, COG1678
CJ010_21055	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CJ010_21060	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CJ010_21065	COG0540	Belongs to the ATCase OTCase family
CJ010_21075	COG1872	DUF167
CJ010_21080	COG0762	integral membrane protein
CJ010_21110	COG0840	transmembrane signaling receptor activity
CJ010_21135	COG0437	4 iron, 4 sulfur cluster binding
CJ010_21140	COG0243	molybdopterin cofactor binding
CJ010_21140	COG3383	formate dehydrogenase (NAD+) activity
CJ010_21175	COG0746	molybdenum cofactor guanylyltransferase activity
CJ010_21185	COG1763	Mo-molybdopterin cofactor biosynthetic process
CJ010_21190	COG4191	Histidine kinase
CJ010_21215	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
CJ010_21220	COG3852	Histidine kinase
CJ010_21230	COG4654	Cytochrome c, class I
CJ010_21235	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CJ010_21240	COG0830	nickel cation binding
CJ010_21245	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
CJ010_21250	COG0804	urea catabolic process
CJ010_21255	COG0832	Belongs to the urease beta subunit family
CJ010_21260	COG0831	urea catabolic process
CJ010_21265	COG0829	nickel cation binding
CJ010_21270	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CJ010_21270	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CJ010_21275	COG1368	sulfuric ester hydrolase activity
CJ010_21285	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ010_21290	COG1116	anion transmembrane transporter activity
CJ010_21295	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ010_21300	COG1733	regulation of RNA biosynthetic process
CJ010_21310	COG1492	cobalamin metabolic process
CJ010_21315	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
CJ010_21335	COG0513	Belongs to the DEAD box helicase family
CJ010_21340	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CJ010_21345	COG0778	Nitroreductase
CJ010_21360	COG5002	protein histidine kinase activity
CJ010_21360	COG5001	Diguanylate cyclase
CJ010_21385	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
CJ010_21410	COG3411	Ferredoxin
CJ010_21420	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ010_21430	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CJ010_21430	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CJ010_21435	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CJ010_21465	COG0625	glutathione transferase activity
CJ010_21475	COG2202	Pas domain
CJ010_21475	COG2199	diguanylate cyclase activity
CJ010_21475	COG2200	EAL domain
CJ010_21485	COG0427	acetyl-CoA hydrolase
CJ010_21495	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CJ010_21510	COG0688	phosphatidylethanolamine metabolic process
CJ010_21520	COG1648	precorrin-2 dehydrogenase activity
CJ010_21520	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CJ010_21530	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CJ010_21535	COG4139	cobalamin transport
CJ010_21540	COG4206	TonB-dependent receptor
CJ010_21550	COG0501	Belongs to the peptidase M48B family
CJ010_21555	COG4269	membrane
CJ010_21560	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CJ010_21565	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
CJ010_21575	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CJ010_21575	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CJ010_21580	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CJ010_21585	COG0859	PFAM glycosyl transferase family 9
CJ010_21595	COG0438	transferase activity, transferring glycosyl groups
CJ010_21620	COG1132	(ABC) transporter
CJ010_21645	COG1215	transferase activity, transferring glycosyl groups
CJ010_21660	COG0438	transferase activity, transferring glycosyl groups
CJ010_21665	COG2192	nodulation
CJ010_21670	COG2755	lipolytic protein G-D-S-L family
CJ010_21670	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CJ010_21675	COG2755	lipolytic protein G-D-S-L family
CJ010_21675	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CJ010_21680	COG0730	response to heat
CJ010_21700	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CJ010_21720	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
CJ010_21725	COG0438	transferase activity, transferring glycosyl groups
CJ010_21730	COG0438	transferase activity, transferring glycosyl groups
CJ010_21775	COG0438	transferase activity, transferring glycosyl groups
CJ010_21830	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CJ010_21845	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CJ010_21850	COG0799	negative regulation of ribosome biogenesis
CJ010_21855	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CJ010_21860	COG0242	peptide deformylase activity
CJ010_21865	COG0424	maF-like protein
CJ010_21870	COG1530	ribonuclease E activity
CJ010_21890	COG0745	RESPONSE REGULATOR receiver
CJ010_21895	COG2205	protein histidine kinase activity
CJ010_21905	COG0583	DNA-binding transcription factor activity
CJ010_21915	COG3015	lipoprotein NlpE involved in copper resistance
CJ010_21925	COG2818	Glycosylase
CJ010_21935	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
CJ010_21940	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CJ010_21950	COG0443	Heat shock 70 kDa protein
CJ010_21955	COG3706	GGDEF domain
CJ010_21975	COG1116	anion transmembrane transporter activity
CJ010_21980	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ010_21990	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CJ010_22020	COG2855	membrane
CJ010_22030	COG0741	lytic transglycosylase activity
CJ010_22035	COG1309	transcriptional regulator
CJ010_22045	COG0411	ABC transporter
CJ010_22060	COG1846	Transcriptional regulator
CJ010_22065	COG0840	transmembrane signaling receptor activity
CJ010_22070	COG2010	Cytochrome c
CJ010_22070	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CJ010_22075	COG1335	isochorismatase
CJ010_22080	COG2309	aminopeptidase activity
CJ010_22085	COG0596	Alpha beta hydrolase
CJ010_22090	COG3473	Maleate cis-trans isomerase
CJ010_22100	COG2080	2 iron, 2 sulfur cluster binding
CJ010_22105	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CJ010_22105	COG2010	Cytochrome c
CJ010_22110	COG3608	succinylglutamate desuccinylase aspartoacylase
CJ010_22110	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
CJ010_22115	COG1944	ATP diphosphatase activity
CJ010_22120	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
CJ010_22125	COG1116	anion transmembrane transporter activity
CJ010_22130	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ010_22135	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ010_22145	COG2197	response regulator
CJ010_22150	COG3851	Histidine kinase
CJ010_22180	COG3842	ATPase activity
CJ010_22190	COG1349	DNA-binding transcription factor activity
CJ010_22200	COG4302	ethanolamine ammonia-lyase activity
CJ010_22225	COG0583	DNA-binding transcription factor activity
CJ010_22230	COG2814	Major facilitator Superfamily
CJ010_22235	COG0656	L-ascorbic acid biosynthetic process
CJ010_22240	COG1858	cytochrome C peroxidase
CJ010_22265	COG1012	belongs to the aldehyde dehydrogenase family
CJ010_22275	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CJ010_22280	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CJ010_22290	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CJ010_22305	COG0067	glutamate synthase
CJ010_22305	COG0069	glutamate synthase activity
CJ010_22305	COG0070	glutamate synthase
CJ010_22310	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CJ010_22315	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CJ010_22320	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CJ010_22355	COG1965	Belongs to the frataxin family
CJ010_22385	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CJ010_22390	COG0284	orotidine-5'-phosphate decarboxylase activity
CJ010_22400	COG0243	molybdopterin cofactor binding
CJ010_22410	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CJ010_22415	COG0708	Exodeoxyribonuclease III
CJ010_22425	COG5002	protein histidine kinase activity
CJ010_22445	COG2233	PERMEase
CJ010_22450	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CJ010_22475	COG0745	RESPONSE REGULATOR receiver
CJ010_22485	COG0745	RESPONSE REGULATOR receiver
CJ010_22490	COG0642	Histidine kinase
CJ010_22495	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CJ010_22505	COG0625	glutathione transferase activity
CJ010_22510	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CJ010_22560	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CJ010_22590	COG0840	transmembrane signaling receptor activity
CJ010_22610	COG0180	Tryptophanyl-tRNA synthetase
CJ010_22635	COG3876	Protein conserved in bacteria
CJ010_22640	COG0471	metal ion transport
CJ010_22650	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJ010_22660	COG2020	methyltransferase activity
CJ010_22665	COG2169	Transcriptional regulator
CJ010_22665	COG1917	Cupin 2, conserved barrel domain protein
CJ010_22670	COG4106	trans-aconitate 2-methyltransferase activity
CJ010_22755	COG0411	ABC transporter
CJ010_22765	COG2814	Major facilitator Superfamily
CJ010_22785	COG0347	Belongs to the P(II) protein family
CJ010_22790	COG0004	ammonium transporteR
CJ010_22795	COG0788	formyltetrahydrofolate deformylase activity
CJ010_22810	COG0488	(ABC) transporter
CJ010_22840	COG0506	proline dehydrogenase activity
CJ010_22840	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CJ010_22840	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CJ010_22855	COG0189	ligase activity
CJ010_22910	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CJ010_22920	COG0371	Dehydrogenase
CJ010_22925	COG0402	S-adenosylhomocysteine deaminase activity
CJ010_22935	COG1652	LysM domain
CJ010_22955	COG0515	serine threonine protein kinase
CJ010_22955	COG2815	serine threonine protein kinase
CJ010_22970	COG3706	GGDEF domain
CJ010_22980	COG0488	(ABC) transporter
CJ010_22985	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ010_22990	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ010_22995	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CJ010_23005	COG0582	viral genome integration into host DNA
CJ010_23080	COG2003	Belongs to the UPF0758 family
CJ010_23145	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CJ010_23150	COG0464	growth
CJ010_23155	COG1404	Belongs to the peptidase S8 family
CJ010_23180	COG4581	dead DEAH box helicase
CJ010_23245	COG5002	protein histidine kinase activity
CJ010_23270	COG2132	Multicopper oxidase
CJ010_23295	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ010_23425	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CJ010_23470	COG1192	Involved in chromosome partitioning
CJ010_23490	COG0583	DNA-binding transcription factor activity
CJ010_23500	COG0789	Transcriptional regulator
CJ010_23525	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJ010_23535	COG4804	nuclease activity
CJ010_23565	COG3339	Conserved Protein
CJ010_23575	COG5489	Protein of unknown function (DUF736)
CJ010_23580	COG1396	sequence-specific DNA binding
CJ010_23610	COG1192	Involved in chromosome partitioning
CJ010_23625	COG4959	Type IV secretory pathway protease TraF
CJ010_23640	COG0789	Transcriptional regulator
CJ010_23685	COG0583	DNA-binding transcription factor activity
CJ010_23705	COG3436	PFAM IS66 Orf2 family protein
CJ010_23710	COG4372	Transposase
CJ010_23730	COG4962	Type ii secretion system protein e
CJ010_23735	COG3838	Conjugal transfer protein Trbc
CJ010_23745	COG3451	type IV secretory pathway VirB4
CJ010_23760	COG3846	protein secretion by the type IV secretion system
CJ010_23770	COG3504	Conjugal transfer protein
CJ010_23775	COG2948	multi-organism process
CJ010_23785	COG3088	subunit of a heme lyase
CJ010_23795	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CJ010_23870	COG0583	DNA-binding transcription factor activity
CJ010_23895	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
CJ010_23900	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
CJ010_23940	COG1773	rubredoxin
CJ010_23960	COG0375	protein maturation
CJ010_23970	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
CJ010_23980	COG0409	Hydrogenase expression formation protein
CJ010_23985	COG0309	Hydrogenase expression formation protein (HypE)
CJ010_23990	COG2204	response regulator
CJ010_24000	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
CJ010_24015	COG3706	GGDEF domain
CJ010_24020	COG4191	Histidine kinase
CJ010_24025	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CJ010_24070	COG0559	Belongs to the binding-protein-dependent transport system permease family
CJ010_24080	COG1970	mechanosensitive ion channel activity
CJ010_24085	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ010_24140	COG2005	Transcriptional regulator
CJ010_24140	COG3585	molybdate ion transport
CJ010_24145	COG3842	ATPase activity
CJ010_24180	COG2982	Protein involved in outer membrane biogenesis
CJ010_24190	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CJ010_24195	COG1074	ATP-dependent DNA helicase activity
CJ010_24200	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CJ010_24220	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CJ010_24230	COG4206	TonB-dependent receptor
CJ010_24260	COG1024	Enoyl-CoA hydratase
CJ010_24260	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ010_24265	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CJ010_24285	COG0583	DNA-binding transcription factor activity
CJ010_24290	COG0473	3-isopropylmalate dehydrogenase activity
CJ010_24300	COG3530	Putative quorum-sensing-regulated virulence factor
CJ010_24305	COG2095	MarC family integral membrane protein
CJ010_24330	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CJ010_24335	COG0022	dehydrogenase e1 component
CJ010_24350	COG0095	Lipoate-protein ligase
CJ010_24370	COG3284	Transcriptional regulator
CJ010_24375	COG3501	Rhs element vgr protein
CJ010_24425	COG0631	protein serine/threonine phosphatase activity
CJ010_24555	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CJ010_24570	COG1028	Short-chain dehydrogenase reductase Sdr
CJ010_24575	COG0475	glutathione-regulated potassium exporter activity
CJ010_24580	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CJ010_24620	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJ010_24625	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CJ010_24640	COG3088	subunit of a heme lyase
CJ010_24645	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJ010_24655	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
CJ010_24670	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CJ010_24675	COG4133	protoheme IX ABC transporter activity
CJ010_24680	COG0840	transmembrane signaling receptor activity
CJ010_24685	COG3005	denitrification pathway
CJ010_24695	COG0348	domain, Protein
CJ010_24700	COG0437	4 iron, 4 sulfur cluster binding
CJ010_24705	COG0243	molybdopterin cofactor binding
CJ010_24720	COG2197	response regulator
CJ010_24725	COG3850	Histidine kinase
CJ010_24735	COG5002	protein histidine kinase activity
CJ010_24735	COG2176	DNA-directed DNA polymerase activity
CJ010_24750	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CJ010_24755	COG1758	RNA polymerase activity
CJ010_24760	COG0194	GDP metabolic process
CJ010_24775	COG0587	DNA-directed DNA polymerase activity
CJ010_24785	COG0789	Transcriptional regulator
CJ010_24790	COG1561	YicC-like family, N-terminal region
CJ010_24795	COG0515	serine threonine protein kinase
CJ010_24795	COG3266	domain, Protein
CJ010_24800	COG0631	protein serine/threonine phosphatase activity
CJ010_24805	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CJ010_24810	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CJ010_24815	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CJ010_24825	COG0616	signal peptide processing
CJ010_24830	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CJ010_24835	COG2022	thiamine diphosphate biosynthetic process
CJ010_24860	COG1335	isochorismatase
CJ010_24870	COG1335	isochorismatase
CJ010_24895	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CJ010_24900	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CJ010_24900	COG2813	Specifically methylates the guanine in position
CJ010_24920	COG2223	nitrite transmembrane transporter activity
CJ010_24930	COG0288	reversible hydration of carbon dioxide
CJ010_24935	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CJ010_24940	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CJ010_24950	COG0569	domain protein
CJ010_24955	COG2204	response regulator
CJ010_24975	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CJ010_24985	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CJ010_24990	COG0706	membrane insertase activity
CJ010_24995	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CJ010_25000	COG0594	ribonuclease P activity
CJ010_25005	COG0230	Belongs to the bacterial ribosomal protein bL34 family