locus-tag class description CDA09_00005 IPR020939 Ribosomal protein L34, conserved site CDA09_00005 IPR000271 Ribosomal protein L34 CDA09_00010 IPR010921 Trp repressor/replication initiator CDA09_00010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00010 IPR038454 DnaA, N-terminal domain superfamily CDA09_00010 IPR024633 DnaA N-terminal domain CDA09_00010 IPR013159 Chromosomal replication initiator, DnaA C-terminal CDA09_00010 IPR013317 Chromosomal replication initiator protein DnaA CDA09_00010 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CDA09_00010 IPR020591 Chromosomal replication control, initiator DnaA-like CDA09_00010 IPR001957 Chromosomal replication control, initiator DnaA CDA09_00010 IPR003593 AAA+ ATPase domain CDA09_00015 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CDA09_00015 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CDA09_00015 IPR001001 DNA polymerase III, beta sliding clamp CDA09_00015 IPR022637 DNA polymerase III, beta sliding clamp, central CDA09_00020 IPR006171 TOPRIM domain CDA09_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain CDA09_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CDA09_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CDA09_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CDA09_00020 IPR001241 DNA topoisomerase, type IIA CDA09_00020 IPR002288 DNA gyrase B subunit, C-terminal CDA09_00020 IPR011557 DNA gyrase, subunit B CDA09_00020 IPR041423 DNA gyrase subunit B insert domain CDA09_00020 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00020 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_00020 IPR018522 DNA topoisomerase, type IIA, conserved site CDA09_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_00040 IPR003593 AAA+ ATPase domain CDA09_00040 IPR002611 IstB-like ATP-binding protein CDA09_00040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00040 IPR001270 ClpA/B family CDA09_00040 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CDA09_00045 IPR017894 HTH domain, IS21 transposase-type CDA09_00045 IPR001584 Integrase, catalytic core CDA09_00060 IPR025758 Fic/DOC N-terminal CDA09_00060 IPR026287 Protein adenylyltransferase SoFic-like CDA09_00060 IPR040198 Fido domain-containing protein CDA09_00060 IPR036597 Fido-like domain superfamily CDA09_00060 IPR003812 Fido domain CDA09_00065 IPR039052 Antitoxin PemI-like CDA09_00065 IPR007159 SpoVT-AbrB domain CDA09_00065 IPR037914 SpoVT-AbrB domain superfamily CDA09_00085 IPR001633 EAL domain CDA09_00085 IPR013515 Phytochrome, central region CDA09_00085 IPR029787 Nucleotide cyclase CDA09_00085 IPR000160 GGDEF domain CDA09_00085 IPR029016 GAF-like domain superfamily CDA09_00085 IPR003018 GAF domain CDA09_00085 IPR035919 EAL domain superfamily CDA09_00085 IPR016132 Phytochrome chromophore attachment domain CDA09_00085 IPR001294 Phytochrome CDA09_00095 IPR005025 NADPH-dependent FMN reductase-like CDA09_00095 IPR008254 Flavodoxin/nitric oxide synthase CDA09_00095 IPR029039 Flavoprotein-like superfamily CDA09_00095 IPR010089 Flavoprotein WrbA-like CDA09_00095 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic CDA09_00105 IPR005330 MHYT domain CDA09_00105 IPR029787 Nucleotide cyclase CDA09_00105 IPR035919 EAL domain superfamily CDA09_00105 IPR000160 GGDEF domain CDA09_00105 IPR001633 EAL domain CDA09_00120 IPR003439 ABC transporter-like CDA09_00120 IPR017871 ABC transporter, conserved site CDA09_00120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00120 IPR003593 AAA+ ATPase domain CDA09_00125 IPR008141 Alanine dehydrogenase CDA09_00125 IPR036291 NAD(P)-binding domain superfamily CDA09_00125 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CDA09_00125 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CDA09_00125 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CDA09_00130 IPR021812 Protein of unknown function DUF3391 CDA09_00130 IPR003607 HD/PDEase domain CDA09_00130 IPR006674 HD domain CDA09_00130 IPR037522 HD-GYP domain CDA09_00130 IPR006675 HDIG domain CDA09_00140 IPR029787 Nucleotide cyclase CDA09_00140 IPR007894 MASE2 CDA09_00140 IPR000160 GGDEF domain CDA09_00145 IPR000847 Transcription regulator HTH, LysR CDA09_00145 IPR036390 Winged helix DNA-binding domain superfamily CDA09_00145 IPR005119 LysR, substrate-binding CDA09_00145 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00150 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_00150 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_00150 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_00150 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_00150 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_00150 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_00150 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_00155 IPR023606 CoA-transferase family III domain superfamily CDA09_00155 IPR003673 CoA-transferase family III CDA09_00160 IPR035919 EAL domain superfamily CDA09_00160 IPR000160 GGDEF domain CDA09_00160 IPR029787 Nucleotide cyclase CDA09_00160 IPR001633 EAL domain CDA09_00160 IPR005330 MHYT domain CDA09_00165 IPR007476 Putative exonuclease, RdgC CDA09_00175 IPR002942 RNA-binding S4 domain CDA09_00175 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CDA09_00175 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CDA09_00175 IPR036986 RNA-binding S4 domain superfamily CDA09_00175 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CDA09_00175 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDA09_00175 IPR006145 Pseudouridine synthase, RsuA/RluA CDA09_00185 IPR012340 Nucleic acid-binding, OB-fold CDA09_00185 IPR013852 Translation elongation factor P/YeiP, conserved site CDA09_00185 IPR001059 Translation elongation factor P/YeiP, central CDA09_00185 IPR013185 Translation elongation factor, KOW-like CDA09_00185 IPR020599 Translation elongation factor P/YeiP CDA09_00185 IPR014722 Ribosomal protein L2, domain 2 CDA09_00185 IPR008991 Translation protein SH3-like domain superfamily CDA09_00185 IPR015365 Elongation factor P, C-terminal CDA09_00185 IPR011768 Translation elongation factor P CDA09_00195 IPR041552 UvrA DNA-binding domain CDA09_00195 IPR041102 UvrA, interaction domain CDA09_00195 IPR004602 UvrABC system subunit A CDA09_00195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00195 IPR003593 AAA+ ATPase domain CDA09_00195 IPR003439 ABC transporter-like CDA09_00195 IPR017871 ABC transporter, conserved site CDA09_00210 IPR005119 LysR, substrate-binding CDA09_00210 IPR000847 Transcription regulator HTH, LysR CDA09_00210 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00210 IPR036390 Winged helix DNA-binding domain superfamily CDA09_00225 IPR009003 Peptidase S1, PA clan CDA09_00225 IPR001940 Peptidase S1C CDA09_00225 IPR001478 PDZ domain CDA09_00225 IPR036034 PDZ superfamily CDA09_00225 IPR011782 Peptidase S1C, Do CDA09_00230 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_00230 IPR010101 TonB-dependent vitamin B12 transporter BtuB CDA09_00230 IPR012910 TonB-dependent receptor, plug domain CDA09_00230 IPR037066 TonB-dependent receptor, plug domain superfamily CDA09_00230 IPR000531 TonB-dependent receptor-like, beta-barrel CDA09_00230 IPR039426 Vitamin B12 transporter BtuB-like CDA09_00235 IPR036390 Winged helix DNA-binding domain superfamily CDA09_00235 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00235 IPR000847 Transcription regulator HTH, LysR CDA09_00235 IPR005119 LysR, substrate-binding CDA09_00240 IPR023753 FAD/NAD(P)-binding domain CDA09_00240 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_00240 IPR041364 Rubredoxin binding domain CDA09_00245 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CDA09_00245 IPR006171 TOPRIM domain CDA09_00245 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CDA09_00245 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CDA09_00245 IPR000380 DNA topoisomerase, type IA CDA09_00245 IPR003601 DNA topoisomerase, type IA, domain 2 CDA09_00245 IPR034144 DNA topoisomerase 3-like, TOPRIM domain CDA09_00245 IPR023406 DNA topoisomerase, type IA, active site CDA09_00245 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CDA09_00245 IPR013497 DNA topoisomerase, type IA, central CDA09_00245 IPR023405 DNA topoisomerase, type IA, core domain CDA09_00245 IPR005738 DNA topoisomerase III CDA09_00250 IPR007456 Smg CDA09_00255 IPR003488 DNA recombination-mediator protein A CDA09_00255 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00255 IPR041614 DprA, winged helix domain CDA09_00265 IPR023635 Peptide deformylase CDA09_00265 IPR036821 Peptide deformylase superfamily CDA09_00270 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CDA09_00270 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CDA09_00270 IPR036477 Formyl transferase, N-terminal domain superfamily CDA09_00270 IPR011034 Formyl transferase-like, C-terminal domain superfamily CDA09_00270 IPR002376 Formyl transferase, N-terminal CDA09_00270 IPR037022 Formyl transferase, C-terminal domain superfamily CDA09_00270 IPR005793 Formyl transferase, C-terminal CDA09_00270 IPR005794 Methionyl-tRNA formyltransferase CDA09_00275 IPR022919 Peptidase M48, protease HtpX, putative CDA09_00275 IPR001915 Peptidase M48 CDA09_00280 IPR003660 HAMP domain CDA09_00280 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_00280 IPR000014 PAS domain CDA09_00280 IPR000700 PAS-associated, C-terminal CDA09_00280 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00280 IPR035965 PAS domain superfamily CDA09_00280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00280 IPR013767 PAS fold CDA09_00280 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_00280 IPR005467 Histidine kinase domain CDA09_00280 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_00285 IPR025944 Sigma-54 interaction domain, conserved site CDA09_00285 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_00285 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_00285 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00285 IPR002197 DNA binding HTH domain, Fis-type CDA09_00285 IPR009057 Homeobox-like domain superfamily CDA09_00285 IPR011006 CheY-like superfamily CDA09_00285 IPR003593 AAA+ ATPase domain CDA09_00285 IPR001789 Signal transduction response regulator, receiver domain CDA09_00285 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_00290 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00290 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain CDA09_00310 IPR013482 Molybdenum cofactor guanylyltransferase CDA09_00310 IPR025877 MobA-like NTP transferase CDA09_00310 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_00315 IPR003786 Sulfur carrier protein FdhD CDA09_00315 IPR016193 Cytidine deaminase-like CDA09_00330 IPR013542 Domain of unknown function DUF1730 CDA09_00330 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_00330 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_00330 IPR004453 Epoxyqueuosine reductase QueG CDA09_00345 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_00345 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_00345 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_00345 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_00345 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_00345 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDA09_00345 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CDA09_00345 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CDA09_00345 IPR006656 Molybdopterin oxidoreductase CDA09_00345 IPR006657 Molybdopterin dinucleotide-binding domain CDA09_00345 IPR006478 Formate dehydrogenase, alpha subunit CDA09_00345 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CDA09_00345 IPR041924 Formate dehydrogenase H, N-terminal CDA09_00350 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_00350 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_00350 IPR000813 7Fe ferredoxin CDA09_00365 IPR013766 Thioredoxin domain CDA09_00365 IPR018219 Thiol peroxidase conserved site CDA09_00365 IPR013740 Redoxin CDA09_00365 IPR036249 Thioredoxin-like superfamily CDA09_00365 IPR002065 Thiol peroxidase Tpx CDA09_00405 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_00410 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_00410 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CDA09_00410 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ CDA09_00410 IPR035906 MetI-like superfamily CDA09_00415 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_00415 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM CDA09_00415 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CDA09_00415 IPR035906 MetI-like superfamily CDA09_00420 IPR003593 AAA+ ATPase domain CDA09_00420 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CDA09_00420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00420 IPR003439 ABC transporter-like CDA09_00420 IPR017871 ABC transporter, conserved site CDA09_00425 IPR013987 PhnA protein, N-terminal CDA09_00425 IPR013988 PhnA protein, C-terminal CDA09_00425 IPR004624 PhnA protein CDA09_00440 IPR026904 GidA associated domain 3 CDA09_00440 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CDA09_00440 IPR020595 MnmG-related, conserved site CDA09_00440 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG CDA09_00440 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_00445 IPR003682 rRNA small subunit methyltransferase G CDA09_00445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_00450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00450 IPR025669 AAA domain CDA09_00455 IPR041468 ParB/Spo0J, HTH domain CDA09_00455 IPR004437 ParB/RepB/Spo0J partition protein CDA09_00455 IPR003115 ParB/Sulfiredoxin CDA09_00455 IPR036086 ParB/Sulfiredoxin superfamily CDA09_00465 IPR035908 ATP synthase, F0 complex, subunit A superfamily CDA09_00465 IPR023011 ATP synthase, F0 complex, subunit A, active site CDA09_00465 IPR000568 ATP synthase, F0 complex, subunit A CDA09_00470 IPR000454 ATP synthase, F0 complex, subunit C CDA09_00470 IPR035921 F/V-ATP synthase subunit C superfamily CDA09_00470 IPR002379 V-ATPase proteolipid subunit C-like domain CDA09_00470 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast CDA09_00470 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site CDA09_00470 IPR038662 F1F0 ATP synthase subunit C superfamily CDA09_00475 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CDA09_00475 IPR005864 ATP synthase, F0 complex, subunit b, bacterial CDA09_00480 IPR000711 ATPase, OSCP/delta subunit CDA09_00480 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily CDA09_00485 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CDA09_00485 IPR000793 ATP synthase, alpha subunit, C-terminal CDA09_00485 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily CDA09_00485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00485 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CDA09_00485 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CDA09_00485 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CDA09_00485 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain CDA09_00485 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CDA09_00485 IPR005294 ATP synthase, F1 complex, alpha subunit CDA09_00490 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site CDA09_00490 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily CDA09_00490 IPR000131 ATP synthase, F1 complex, gamma subunit CDA09_00495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00495 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CDA09_00495 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CDA09_00495 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CDA09_00495 IPR003593 AAA+ ATPase domain CDA09_00495 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CDA09_00495 IPR005722 ATP synthase, F1 complex, beta subunit CDA09_00495 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal CDA09_00500 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal CDA09_00500 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CDA09_00500 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily CDA09_00500 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CDA09_00500 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal CDA09_00515 IPR023576 UbiE/COQ5 methyltransferase, conserved site CDA09_00515 IPR004033 UbiE/COQ5 methyltransferase CDA09_00515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_00525 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_00525 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00525 IPR039420 Transcriptional regulatory protein WalR-like CDA09_00525 IPR011006 CheY-like superfamily CDA09_00525 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CDA09_00525 IPR001789 Signal transduction response regulator, receiver domain CDA09_00530 IPR021766 Phosphate regulon sensor protein PhoR CDA09_00530 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_00530 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR CDA09_00530 IPR035965 PAS domain superfamily CDA09_00530 IPR000014 PAS domain CDA09_00530 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_00530 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_00530 IPR005467 Histidine kinase domain CDA09_00530 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00530 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00530 IPR013767 PAS fold CDA09_00545 IPR017932 Glutamine amidotransferase type 2 domain CDA09_00545 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_00545 IPR026869 Putative glutamine amidotransferase type 2 CDA09_00550 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site CDA09_00550 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CDA09_00550 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E CDA09_00550 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 CDA09_00550 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CDA09_00550 IPR018027 Asn/Gln amidotransferase CDA09_00550 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic CDA09_00550 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CDA09_00550 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit CDA09_00560 IPR000120 Amidase CDA09_00560 IPR020556 Amidase, conserved site CDA09_00560 IPR023631 Amidase signature domain CDA09_00560 IPR036928 Amidase signature (AS) superfamily CDA09_00560 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CDA09_00565 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C CDA09_00565 IPR003837 Glu-tRNAGln amidotransferase C subunit CDA09_00570 IPR004753 Cell shape determining protein MreB CDA09_00585 IPR001460 Penicillin-binding protein, transpeptidase CDA09_00585 IPR005311 Penicillin-binding protein, dimerisation domain CDA09_00585 IPR017790 Penicillin-binding protein 2 CDA09_00585 IPR012338 Beta-lactamase/transpeptidase-like CDA09_00585 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CDA09_00590 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CDA09_00590 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB CDA09_00590 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CDA09_00595 IPR034718 Endolytic peptidoglycan transglycosylase RlpA CDA09_00595 IPR007730 Sporulation-like domain CDA09_00595 IPR009009 RlpA-like protein, double-psi beta-barrel domain CDA09_00595 IPR012997 Rare lipoprotein A CDA09_00595 IPR036680 Sporulation-like domain superfamily CDA09_00595 IPR036908 RlpA-like domain superfamily CDA09_00600 IPR012338 Beta-lactamase/transpeptidase-like CDA09_00600 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CDA09_00600 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CDA09_00600 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CDA09_00600 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CDA09_00600 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CDA09_00605 IPR001544 Aminotransferase class IV CDA09_00605 IPR005784 D-amino acid aminotransferase CDA09_00605 IPR036038 Aminotransferase-like, PLP-dependent enzymes CDA09_00605 IPR018300 Aminotransferase, class IV, conserved site CDA09_00610 IPR027471 YbeD-like domain superfamily CDA09_00610 IPR007454 Uncharacterised protein family UPF0250 CDA09_00615 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CDA09_00615 IPR000544 Octanoyltransferase CDA09_00615 IPR020605 Octanoyltransferase, conserved site CDA09_00620 IPR006638 Elp3/MiaB/NifB CDA09_00620 IPR031691 Lipoyl synthase, N-terminal CDA09_00620 IPR003698 Lipoyl synthase CDA09_00620 IPR007197 Radical SAM CDA09_00620 IPR013785 Aldolase-type TIM barrel CDA09_00625 IPR037187 DksA, N-terminal domain superfamily CDA09_00625 IPR012784 RNA polymerase-binding transcription factor DksA CDA09_00625 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CDA09_00625 IPR000962 Zinc finger, DksA/TraR C4-type CDA09_00635 IPR000212 DNA helicase, UvrD/REP type CDA09_00635 IPR014017 UvrD-like DNA helicase, C-terminal CDA09_00635 IPR013986 DExx box DNA helicase domain superfamily CDA09_00635 IPR034739 UvrD/AddA helicase, N-terminal CDA09_00635 IPR005752 ATP-dependent DNA helicase Rep CDA09_00635 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00635 IPR014016 UvrD-like helicase, ATP-binding domain CDA09_00640 IPR033479 Double Cache domain 1 CDA09_00640 IPR003660 HAMP domain CDA09_00640 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDA09_00640 IPR029151 Periplasmic sensor-like domain superfamily CDA09_00640 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CDA09_00645 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_00645 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_00645 IPR006311 Twin-arginine translocation pathway, signal sequence CDA09_00650 IPR005614 NrfD family CDA09_00655 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_00655 IPR041929 Tetrathionate reductase subunit A, N-terminal CDA09_00655 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDA09_00655 IPR006656 Molybdopterin oxidoreductase CDA09_00655 IPR006657 Molybdopterin dinucleotide-binding domain CDA09_00655 IPR037946 Tetrathionate reductase subunit A, MopB domain CDA09_00660 IPR001789 Signal transduction response regulator, receiver domain CDA09_00660 IPR011006 CheY-like superfamily CDA09_00660 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00660 IPR000792 Transcription regulator LuxR, C-terminal CDA09_00665 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00665 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_00665 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_00665 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_00665 IPR005467 Histidine kinase domain CDA09_00665 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00670 IPR002323 Cytochrome c, class IE CDA09_00670 IPR036909 Cytochrome c-like domain superfamily CDA09_00670 IPR009056 Cytochrome c-like domain CDA09_00680 IPR011006 CheY-like superfamily CDA09_00680 IPR003607 HD/PDEase domain CDA09_00680 IPR037522 HD-GYP domain CDA09_00680 IPR001789 Signal transduction response regulator, receiver domain CDA09_00685 IPR011006 CheY-like superfamily CDA09_00685 IPR003660 HAMP domain CDA09_00685 IPR001789 Signal transduction response regulator, receiver domain CDA09_00685 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDA09_00685 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_00685 IPR036641 HPT domain superfamily CDA09_00685 IPR019247 Histidine kinase BarA, N-terminal CDA09_00685 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_00685 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_00685 IPR005467 Histidine kinase domain CDA09_00685 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00685 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00715 IPR009061 Putative DNA-binding domain superfamily CDA09_00715 IPR041657 Helix-turn-helix domain, group 17 CDA09_00715 IPR025847 MEDS domain CDA09_00715 IPR010093 SinI-like, DNA-binding domain CDA09_00725 IPR013785 Aldolase-type TIM barrel CDA09_00725 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDA09_00725 IPR023663 NADPH dehydrogenase CDA09_00730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00730 IPR001650 Helicase, C-terminal CDA09_00730 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_00730 IPR004589 DNA helicase, ATP-dependent, RecQ type CDA09_00730 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site CDA09_00730 IPR011545 DEAD/DEAH box helicase domain CDA09_00750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00750 IPR017871 ABC transporter, conserved site CDA09_00750 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_00750 IPR003439 ABC transporter-like CDA09_00750 IPR003593 AAA+ ATPase domain CDA09_00755 IPR003593 AAA+ ATPase domain CDA09_00755 IPR003439 ABC transporter-like CDA09_00755 IPR017871 ABC transporter, conserved site CDA09_00755 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_00755 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00760 IPR001851 ABC transporter, permease CDA09_00760 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CDA09_00765 IPR001851 ABC transporter, permease CDA09_00770 IPR028081 Leucine-binding protein domain CDA09_00770 IPR000709 Leu/Ile/Val-binding protein CDA09_00770 IPR028082 Periplasmic binding protein-like I CDA09_00775 IPR005119 LysR, substrate-binding CDA09_00775 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00775 IPR036390 Winged helix DNA-binding domain superfamily CDA09_00775 IPR000847 Transcription regulator HTH, LysR CDA09_00790 IPR008854 TPMT family CDA09_00790 IPR025835 Thiopurine S-methyltransferase CDA09_00790 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification CDA09_00790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_00800 IPR000182 GNAT domain CDA09_00800 IPR016181 Acyl-CoA N-acyltransferase CDA09_00810 IPR036259 MFS transporter superfamily CDA09_00810 IPR020846 Major facilitator superfamily domain CDA09_00810 IPR005829 Sugar transporter, conserved site CDA09_00810 IPR011701 Major facilitator superfamily CDA09_00810 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family CDA09_00825 IPR003959 ATPase, AAA-type, core CDA09_00825 IPR041569 AAA ATPase, AAA+ lid domain CDA09_00825 IPR003593 AAA+ ATPase domain CDA09_00825 IPR011546 Peptidase M41, FtsH extracellular CDA09_00825 IPR037219 Peptidase M41-like CDA09_00825 IPR000642 Peptidase M41 CDA09_00825 IPR003960 ATPase, AAA-type, conserved site CDA09_00825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00825 IPR005936 Peptidase, FtsH CDA09_00840 IPR030390 RNA methyltransferase TrmA, active site CDA09_00840 IPR030391 RNA methyltransferase TrmA, conserved site CDA09_00840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_00840 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA CDA09_00840 IPR010280 (Uracil-5)-methyltransferase family CDA09_00855 IPR000726 Glycoside hydrolase, family 19, catalytic CDA09_00855 IPR023346 Lysozyme-like domain superfamily CDA09_00865 IPR006059 Bacterial extracellular solute-binding protein CDA09_00865 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CDA09_00870 IPR017871 ABC transporter, conserved site CDA09_00870 IPR013611 Transport-associated OB, type 2 CDA09_00870 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CDA09_00870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00870 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_00870 IPR003593 AAA+ ATPase domain CDA09_00870 IPR003439 ABC transporter-like CDA09_00875 IPR035906 MetI-like superfamily CDA09_00875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_00880 IPR035906 MetI-like superfamily CDA09_00880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_00885 IPR011527 ABC transporter type 1, transmembrane domain CDA09_00885 IPR039421 Type I protein exporter CDA09_00885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00885 IPR003593 AAA+ ATPase domain CDA09_00885 IPR036640 ABC transporter type 1, transmembrane domain superfamily CDA09_00885 IPR003439 ABC transporter-like CDA09_00885 IPR017871 ABC transporter, conserved site CDA09_00895 IPR018634 Chromate resistance exported protein CDA09_00900 IPR014047 Chromate transporter, long chain CDA09_00900 IPR003370 Chromate transporter CDA09_00910 IPR018634 Chromate resistance exported protein CDA09_00915 IPR001789 Signal transduction response regulator, receiver domain CDA09_00915 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_00915 IPR039420 Transcriptional regulatory protein WalR-like CDA09_00915 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response CDA09_00915 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_00915 IPR011006 CheY-like superfamily CDA09_00930 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00930 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_00930 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_00930 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_00930 IPR005467 Histidine kinase domain CDA09_00930 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00930 IPR003660 HAMP domain CDA09_00935 IPR003439 ABC transporter-like CDA09_00935 IPR003593 AAA+ ATPase domain CDA09_00935 IPR005978 Nodulation ABC transporter, NodI CDA09_00935 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00935 IPR017871 ABC transporter, conserved site CDA09_00935 IPR015851 ABC transporter, NodI CDA09_00950 IPR008816 Glycine zipper 2TM domain CDA09_00965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00965 IPR013986 DExx box DNA helicase domain superfamily CDA09_00965 IPR041500 RecC, C-terminal CDA09_00965 IPR011335 Restriction endonuclease type II-like CDA09_00965 IPR006697 RecBCD enzyme subunit RecC CDA09_00970 IPR011604 Exonuclease, phage-type/RecB, C-terminal CDA09_00970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00970 IPR000212 DNA helicase, UvrD/REP type CDA09_00970 IPR014017 UvrD-like DNA helicase, C-terminal CDA09_00970 IPR014016 UvrD-like helicase, ATP-binding domain CDA09_00970 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CDA09_00970 IPR004586 RecBCD enzyme subunit RecB CDA09_00970 IPR011335 Restriction endonuclease type II-like CDA09_00970 IPR034739 UvrD/AddA helicase, N-terminal CDA09_00975 IPR003593 AAA+ ATPase domain CDA09_00975 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00975 IPR006344 RecBCD enzyme subunit RecD CDA09_00975 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain CDA09_00975 IPR027785 UvrD-like helicase C-terminal domain CDA09_00980 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_00980 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_00980 IPR000700 PAS-associated, C-terminal CDA09_00980 IPR000014 PAS domain CDA09_00980 IPR001610 PAC motif CDA09_00980 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_00980 IPR035965 PAS domain superfamily CDA09_00980 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_00980 IPR005467 Histidine kinase domain CDA09_00980 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_00980 IPR013767 PAS fold CDA09_00985 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_00985 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_00985 IPR001789 Signal transduction response regulator, receiver domain CDA09_00985 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_00985 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_00985 IPR011006 CheY-like superfamily CDA09_00985 IPR025944 Sigma-54 interaction domain, conserved site CDA09_00985 IPR009057 Homeobox-like domain superfamily CDA09_00985 IPR003593 AAA+ ATPase domain CDA09_00985 IPR002197 DNA binding HTH domain, Fis-type CDA09_00990 IPR042094 Type II secretion system F domain superfamily CDA09_00990 IPR003004 GspF/PilC family CDA09_00990 IPR001992 Type II secretion system conserved site CDA09_00990 IPR018076 Type II secretion system F domain CDA09_00995 IPR010054 General secretion pathway protein G CDA09_00995 IPR013545 Type II secretion system protein G CDA09_00995 IPR012902 Prokaryotic N-terminal methylation site CDA09_00995 IPR000983 Bacterial general secretion pathway protein G-type pilin CDA09_01000 IPR011055 Duplicated hybrid motif CDA09_01000 IPR008258 Transglycosylase SLT domain 1 CDA09_01000 IPR000189 Prokaryotic transglycosylase, active site CDA09_01000 IPR010090 Phage tail tape measure protein CDA09_01000 IPR023346 Lysozyme-like domain superfamily CDA09_01000 IPR016047 Peptidase M23 CDA09_01045 IPR003593 AAA+ ATPase domain CDA09_01045 IPR011006 CheY-like superfamily CDA09_01045 IPR025944 Sigma-54 interaction domain, conserved site CDA09_01045 IPR009057 Homeobox-like domain superfamily CDA09_01045 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_01045 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_01045 IPR002197 DNA binding HTH domain, Fis-type CDA09_01045 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01045 IPR001789 Signal transduction response regulator, receiver domain CDA09_01050 IPR003593 AAA+ ATPase domain CDA09_01050 IPR001482 Type II/IV secretion system protein CDA09_01050 IPR013369 Type II secretion system GspE CDA09_01050 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01050 IPR037257 General secretory system II, protein E, N-terminal superfamily CDA09_01075 IPR004845 Type II secretion system GspD, conserved site CDA09_01075 IPR001775 GspD/PilQ family CDA09_01075 IPR005644 NolW-like CDA09_01075 IPR038591 NolW-like superfamily CDA09_01075 IPR004846 Type II/III secretion system CDA09_01075 IPR013356 Type II secretion system GspD CDA09_01080 IPR013545 Type II secretion system protein G CDA09_01080 IPR012902 Prokaryotic N-terminal methylation site CDA09_01080 IPR010054 General secretion pathway protein G CDA09_01080 IPR000983 Bacterial general secretion pathway protein G-type pilin CDA09_01085 IPR012902 Prokaryotic N-terminal methylation site CDA09_01085 IPR001082 Fimbrial protein pilin CDA09_01095 IPR012156 Cold shock, CspA CDA09_01095 IPR011129 Cold shock domain CDA09_01095 IPR019844 Cold-shock (CSD) domain CDA09_01095 IPR002059 Cold-shock protein, DNA-binding CDA09_01095 IPR012340 Nucleic acid-binding, OB-fold CDA09_01105 IPR018080 Band 7/stomatin-like, conserved site CDA09_01105 IPR036013 Band 7/SPFH domain superfamily CDA09_01105 IPR032435 Band 7, C-terminal extension CDA09_01105 IPR001972 Stomatin family CDA09_01105 IPR001107 Band 7 domain CDA09_01135 IPR011701 Major facilitator superfamily CDA09_01135 IPR036259 MFS transporter superfamily CDA09_01135 IPR023727 Lysophospholipid transporter LplT CDA09_01145 IPR038765 Papain-like cysteine peptidase superfamily CDA09_01145 IPR002931 Transglutaminase-like CDA09_01150 IPR013766 Thioredoxin domain CDA09_01150 IPR017937 Thioredoxin, conserved site CDA09_01150 IPR036249 Thioredoxin-like superfamily CDA09_01150 IPR023555 Thiol-disulphide oxidoreductase ResA CDA09_01150 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDA09_01160 IPR010292 Uncharacterised protein family CreA CDA09_01170 IPR001853 DSBA-like thioredoxin domain CDA09_01170 IPR036249 Thioredoxin-like superfamily CDA09_01175 IPR012724 Chaperone DnaJ CDA09_01175 IPR036869 Chaperone J-domain superfamily CDA09_01175 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CDA09_01175 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CDA09_01175 IPR008971 HSP40/DnaJ peptide-binding CDA09_01175 IPR001623 DnaJ domain CDA09_01175 IPR002939 Chaperone DnaJ, C-terminal CDA09_01200 IPR017665 Guanylate kinase CDA09_01200 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CDA09_01200 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01200 IPR020590 Guanylate kinase, conserved site CDA09_01200 IPR008144 Guanylate kinase-like domain CDA09_01205 IPR012293 RNA polymerase subunit, RPB6/omega CDA09_01205 IPR006110 RNA polymerase, subunit omega/K/RPB6 CDA09_01205 IPR003716 DNA-directed RNA polymerase, omega subunit CDA09_01205 IPR036161 RPB6/omega subunit-like superfamily CDA09_01210 IPR003607 HD/PDEase domain CDA09_01210 IPR002912 ACT domain CDA09_01210 IPR033655 RelA, TGS domain CDA09_01210 IPR012676 TGS-like CDA09_01210 IPR004095 TGS CDA09_01210 IPR007685 RelA/SpoT CDA09_01210 IPR004811 RelA/SpoT family CDA09_01210 IPR012675 Beta-grasp domain superfamily CDA09_01215 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDA09_01215 IPR036627 CobW-like, C-terminal domain superfamily CDA09_01215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01215 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CDA09_01220 IPR000524 Transcription regulator HTH, GntR CDA09_01220 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_01220 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_01220 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_01220 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_01220 IPR036390 Winged helix DNA-binding domain superfamily CDA09_01220 IPR004839 Aminotransferase, class I/classII CDA09_01235 IPR028112 DNA polymerase III polC-type, N-terminal domain I CDA09_01235 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CDA09_01235 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_01235 IPR004013 PHP domain CDA09_01235 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDA09_01235 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type CDA09_01235 IPR029460 DNA polymerase, helix-hairpin-helix motif CDA09_01235 IPR024754 DNA polymerase III polC-like, N-terminal domain II CDA09_01235 IPR012337 Ribonuclease H-like superfamily CDA09_01235 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CDA09_01235 IPR036397 Ribonuclease H superfamily CDA09_01235 IPR040982 DNA polymerase III alpha subunit finger domain CDA09_01245 IPR042295 NarX-like, N-terminal domain superfamily CDA09_01245 IPR003660 HAMP domain CDA09_01245 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01245 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01245 IPR005467 Histidine kinase domain CDA09_01245 IPR029095 NarX-like, N-terminal CDA09_01245 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing CDA09_01245 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDA09_01250 IPR000792 Transcription regulator LuxR, C-terminal CDA09_01250 IPR001789 Signal transduction response regulator, receiver domain CDA09_01250 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_01250 IPR011006 CheY-like superfamily CDA09_01250 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_01265 IPR006656 Molybdopterin oxidoreductase CDA09_01265 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDA09_01265 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CDA09_01265 IPR010051 Periplasmic nitrate reductase, large subunit CDA09_01265 IPR006311 Twin-arginine translocation pathway, signal sequence CDA09_01265 IPR006657 Molybdopterin dinucleotide-binding domain CDA09_01265 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain CDA09_01265 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_01270 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDA09_01270 IPR004494 MauM/NapG ferredoxin-type protein CDA09_01270 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_01270 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_01275 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_01275 IPR011886 Ferredoxin-type protein, NapH/MauN family CDA09_01275 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_01280 IPR011031 Multihaem cytochrome CDA09_01280 IPR036280 Multiheme cytochrome superfamily CDA09_01280 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CDA09_01285 IPR036280 Multiheme cytochrome superfamily CDA09_01285 IPR005126 NapC/NirT cytochrome c, N-terminal CDA09_01285 IPR038266 NapC/NirT cytochrome c superfamily CDA09_01285 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT CDA09_01285 IPR024717 Denitrification system component NapC/NirT/NrfH CDA09_01285 IPR011031 Multihaem cytochrome CDA09_01290 IPR003593 AAA+ ATPase domain CDA09_01290 IPR003439 ABC transporter-like CDA09_01290 IPR017871 ABC transporter, conserved site CDA09_01290 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01290 IPR005895 ABC transporter, haem export, CcmA CDA09_01295 IPR003544 Cytochrome c-type biogenesis protein CcmB CDA09_01295 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CDA09_01300 IPR002541 Cytochrome c assembly protein CDA09_01300 IPR003557 Cytochrome c-type biogenesis protein CcmC CDA09_01305 IPR007078 Haem exporter protein D (CcmD) CDA09_01310 IPR036127 CcmE-like superfamily CDA09_01310 IPR004329 CcmE/CycJ protein CDA09_01315 IPR002541 Cytochrome c assembly protein CDA09_01315 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CDA09_01315 IPR003568 Cytochrome c-type biogenesis protein CcmF CDA09_01315 IPR003567 Cytochrome c-type biogenesis protein CDA09_01320 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CDA09_01320 IPR013740 Redoxin CDA09_01320 IPR036249 Thioredoxin-like superfamily CDA09_01320 IPR017937 Thioredoxin, conserved site CDA09_01320 IPR013766 Thioredoxin domain CDA09_01325 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CDA09_01325 IPR005616 CcmH/CycL/Ccl2/NrfF family CDA09_01330 IPR005616 CcmH/CycL/Ccl2/NrfF family CDA09_01330 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CDA09_01330 IPR013026 Tetratricopeptide repeat-containing domain CDA09_01330 IPR011990 Tetratricopeptide-like helical domain superfamily CDA09_01330 IPR019734 Tetratricopeptide repeat CDA09_01345 IPR023655 Cytochrome c6 CDA09_01345 IPR036909 Cytochrome c-like domain superfamily CDA09_01345 IPR008168 Cytochrome c, class IC CDA09_01345 IPR009056 Cytochrome c-like domain CDA09_01355 IPR003593 AAA+ ATPase domain CDA09_01355 IPR025944 Sigma-54 interaction domain, conserved site CDA09_01355 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_01355 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_01355 IPR011006 CheY-like superfamily CDA09_01355 IPR001789 Signal transduction response regulator, receiver domain CDA09_01355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01355 IPR002197 DNA binding HTH domain, Fis-type CDA09_01355 IPR009057 Homeobox-like domain superfamily CDA09_01355 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_01360 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01360 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_01360 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_01360 IPR005467 Histidine kinase domain CDA09_01360 IPR029151 Periplasmic sensor-like domain superfamily CDA09_01360 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01360 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_01375 IPR036249 Thioredoxin-like superfamily CDA09_01375 IPR017937 Thioredoxin, conserved site CDA09_01375 IPR013766 Thioredoxin domain CDA09_01375 IPR013740 Redoxin CDA09_01385 IPR003557 Cytochrome c-type biogenesis protein CcmC CDA09_01385 IPR002541 Cytochrome c assembly protein CDA09_01415 IPR017562 Cytochrome c-type biogenesis protein CcsA CDA09_01415 IPR003557 Cytochrome c-type biogenesis protein CcmC CDA09_01415 IPR002541 Cytochrome c assembly protein CDA09_01470 IPR009056 Cytochrome c-like domain CDA09_01470 IPR002323 Cytochrome c, class IE CDA09_01470 IPR036909 Cytochrome c-like domain superfamily CDA09_01475 IPR036909 Cytochrome c-like domain superfamily CDA09_01475 IPR009056 Cytochrome c-like domain CDA09_01480 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CDA09_01480 IPR008168 Cytochrome c, class IC CDA09_01480 IPR036909 Cytochrome c-like domain superfamily CDA09_01480 IPR009056 Cytochrome c-like domain CDA09_01480 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily CDA09_01480 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal CDA09_01500 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_01500 IPR001173 Glycosyltransferase 2-like CDA09_01505 IPR002797 Polysaccharide biosynthesis protein CDA09_01505 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CDA09_01510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_01510 IPR010233 Ubiquinone biosynthesis O-methyltransferase CDA09_01515 IPR001173 Glycosyltransferase 2-like CDA09_01515 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_01520 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_01520 IPR001173 Glycosyltransferase 2-like CDA09_01525 IPR036291 NAD(P)-binding domain superfamily CDA09_01525 IPR001509 NAD-dependent epimerase/dehydratase CDA09_01545 IPR000014 PAS domain CDA09_01545 IPR029787 Nucleotide cyclase CDA09_01545 IPR000700 PAS-associated, C-terminal CDA09_01545 IPR035965 PAS domain superfamily CDA09_01545 IPR013656 PAS fold-4 CDA09_01545 IPR000160 GGDEF domain CDA09_01555 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDA09_01555 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_01555 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_01555 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_01560 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_01560 IPR007197 Radical SAM CDA09_01560 IPR006158 Cobalamin (vitamin B12)-binding domain CDA09_01560 IPR034466 Methyltransferase, class B CDA09_01560 IPR006638 Elp3/MiaB/NifB CDA09_01570 IPR029787 Nucleotide cyclase CDA09_01570 IPR001633 EAL domain CDA09_01570 IPR005330 MHYT domain CDA09_01570 IPR000160 GGDEF domain CDA09_01570 IPR035919 EAL domain superfamily CDA09_01575 IPR000821 Alanine racemase CDA09_01575 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CDA09_01575 IPR011079 Alanine racemase, C-terminal CDA09_01575 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CDA09_01575 IPR001608 Alanine racemase, N-terminal CDA09_01575 IPR029066 PLP-binding barrel CDA09_01580 IPR006076 FAD dependent oxidoreductase CDA09_01580 IPR023080 D-amino acid dehydrogenase DadA CDA09_01580 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_01585 IPR019888 Transcription regulator AsnC-type CDA09_01585 IPR011008 Dimeric alpha-beta barrel CDA09_01585 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_01585 IPR036390 Winged helix DNA-binding domain superfamily CDA09_01585 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDA09_01585 IPR011991 ArsR-like helix-turn-helix domain CDA09_01585 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDA09_01585 IPR000485 AsnC-type HTH domain CDA09_01605 IPR020881 Phosphoglycerol transferase I CDA09_01605 IPR017850 Alkaline-phosphatase-like, core domain superfamily CDA09_01605 IPR000917 Sulfatase, N-terminal CDA09_01625 IPR035919 EAL domain superfamily CDA09_01625 IPR001633 EAL domain CDA09_01625 IPR029787 Nucleotide cyclase CDA09_01625 IPR005330 MHYT domain CDA09_01625 IPR000160 GGDEF domain CDA09_01630 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CDA09_01630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_01630 IPR013656 PAS fold-4 CDA09_01630 IPR035965 PAS domain superfamily CDA09_01630 IPR035909 Methylesterase CheB, C-terminal CDA09_01630 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CDA09_01630 IPR000780 MCP methyltransferase, CheR-type CDA09_01630 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CDA09_01630 IPR000014 PAS domain CDA09_01635 IPR039315 Chemotaxis protein CheW CDA09_01635 IPR002545 CheW-like domain CDA09_01635 IPR036061 CheW-like domain superfamily CDA09_01640 IPR004090 Chemotaxis methyl-accepting receptor CDA09_01640 IPR003660 HAMP domain CDA09_01640 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDA09_01640 IPR033463 Single cache domain 3 CDA09_01640 IPR029151 Periplasmic sensor-like domain superfamily CDA09_01645 IPR011006 CheY-like superfamily CDA09_01645 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01645 IPR005467 Histidine kinase domain CDA09_01645 IPR036641 HPT domain superfamily CDA09_01645 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_01645 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDA09_01645 IPR036061 CheW-like domain superfamily CDA09_01645 IPR001789 Signal transduction response regulator, receiver domain CDA09_01645 IPR002545 CheW-like domain CDA09_01650 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CDA09_01650 IPR011006 CheY-like superfamily CDA09_01650 IPR035909 Methylesterase CheB, C-terminal CDA09_01650 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type CDA09_01650 IPR001789 Signal transduction response regulator, receiver domain CDA09_01655 IPR033479 Double Cache domain 1 CDA09_01655 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01655 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01655 IPR005467 Histidine kinase domain CDA09_01655 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_01655 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CDA09_01655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_01655 IPR029151 Periplasmic sensor-like domain superfamily CDA09_01655 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_01660 IPR005330 MHYT domain CDA09_01660 IPR000160 GGDEF domain CDA09_01660 IPR035919 EAL domain superfamily CDA09_01660 IPR001633 EAL domain CDA09_01660 IPR029787 Nucleotide cyclase CDA09_01670 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_01670 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_01670 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDA09_01670 IPR015590 Aldehyde dehydrogenase domain CDA09_01670 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_01675 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB CDA09_01675 IPR029045 ClpP/crotonase-like domain superfamily CDA09_01675 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_01675 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_01680 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CDA09_01680 IPR036291 NAD(P)-binding domain superfamily CDA09_01680 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDA09_01680 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_01680 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CDA09_01680 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDA09_01680 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC CDA09_01685 IPR029069 HotDog domain superfamily CDA09_01685 IPR011973 Phenylacetic acid degradation protein PaaD CDA09_01685 IPR003736 Phenylacetic acid degradation-related domain CDA09_01685 IPR006683 Thioesterase domain CDA09_01695 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A CDA09_01695 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C CDA09_01695 IPR012347 Ferritin-like CDA09_01695 IPR009078 Ferritin-like superfamily CDA09_01700 IPR038693 Phenylacetyl-CoA epoxidase, subunit B CDA09_01700 IPR009359 Phenylacetic acid degradation B CDA09_01705 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C CDA09_01705 IPR009078 Ferritin-like superfamily CDA09_01705 IPR012347 Ferritin-like CDA09_01705 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C CDA09_01710 IPR034904 Fe-S cluster assembly domain superfamily CDA09_01710 IPR002744 MIP18 family-like CDA09_01710 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit CDA09_01715 IPR017927 FAD-binding domain, ferredoxin reductase-type CDA09_01715 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_01715 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_01715 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_01715 IPR012675 Beta-grasp domain superfamily CDA09_01715 IPR017938 Riboflavin synthase-like beta-barrel CDA09_01715 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit CDA09_01715 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDA09_01715 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_01715 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDA09_01715 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDA09_01725 IPR000709 Leu/Ile/Val-binding protein CDA09_01725 IPR028081 Leucine-binding protein domain CDA09_01725 IPR028082 Periplasmic binding protein-like I CDA09_01735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01735 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_01735 IPR017871 ABC transporter, conserved site CDA09_01735 IPR003439 ABC transporter-like CDA09_01735 IPR003593 AAA+ ATPase domain CDA09_01740 IPR003593 AAA+ ATPase domain CDA09_01740 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_01740 IPR003439 ABC transporter-like CDA09_01740 IPR017871 ABC transporter, conserved site CDA09_01740 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01755 IPR036390 Winged helix DNA-binding domain superfamily CDA09_01755 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_01755 IPR000847 Transcription regulator HTH, LysR CDA09_01755 IPR005119 LysR, substrate-binding CDA09_01765 IPR002589 Macro domain CDA09_01770 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_01770 IPR016160 Aldehyde dehydrogenase, cysteine active site CDA09_01770 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_01770 IPR015590 Aldehyde dehydrogenase domain CDA09_01770 IPR010061 Methylmalonate-semialdehyde dehydrogenase CDA09_01770 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_01775 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_01775 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_01775 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_01775 IPR005814 Aminotransferase class-III CDA09_01780 IPR005119 LysR, substrate-binding CDA09_01780 IPR000847 Transcription regulator HTH, LysR CDA09_01780 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_01780 IPR036390 Winged helix DNA-binding domain superfamily CDA09_01785 IPR000119 Histone-like DNA-binding protein CDA09_01785 IPR020816 Histone-like DNA-binding protein, conserved site CDA09_01785 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CDA09_01790 IPR011545 DEAD/DEAH box helicase domain CDA09_01790 IPR028622 ATP-dependent RNA helicase RhlE CDA09_01790 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_01790 IPR001650 Helicase, C-terminal CDA09_01790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_01790 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDA09_01790 IPR014014 RNA helicase, DEAD-box type, Q motif CDA09_01795 IPR011605 NusB antitermination factor CDA09_01795 IPR035926 NusB-like superfamily CDA09_01795 IPR006027 NusB/RsmB/TIM44 CDA09_01800 IPR034964 Lumazine synthase CDA09_01800 IPR002180 Lumazine/riboflavin synthase CDA09_01800 IPR036467 Lumazine/riboflavin synthase superfamily CDA09_01805 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDA09_01805 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CDA09_01805 IPR036144 RibA-like superfamily CDA09_01805 IPR032677 GTP cyclohydrolase II CDA09_01810 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CDA09_01810 IPR001783 Lumazine-binding protein CDA09_01810 IPR026017 Lumazine-binding domain CDA09_01810 IPR017938 Riboflavin synthase-like beta-barrel CDA09_01815 IPR013766 Thioredoxin domain CDA09_01815 IPR035671 DsbD gamma CDA09_01815 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CDA09_01815 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDA09_01815 IPR022910 Thiol:disulphide interchange protein DsbD CDA09_01815 IPR036249 Thioredoxin-like superfamily CDA09_01815 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CDA09_01815 IPR017937 Thioredoxin, conserved site CDA09_01835 IPR039420 Transcriptional regulatory protein WalR-like CDA09_01835 IPR011006 CheY-like superfamily CDA09_01835 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_01835 IPR001789 Signal transduction response regulator, receiver domain CDA09_01835 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_01840 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_01840 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_01840 IPR039379 Protoglobin, globin sensor domain CDA09_01840 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_01840 IPR005467 Histidine kinase domain CDA09_01840 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01840 IPR012292 Globin/Protoglobin CDA09_01840 IPR009050 Globin-like superfamily CDA09_01840 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_01850 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDA09_01850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_01850 IPR033414 Periplasmic sensor domain CDA09_01850 IPR036641 HPT domain superfamily CDA09_01850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_01850 IPR005467 Histidine kinase domain CDA09_01850 IPR011006 CheY-like superfamily CDA09_01850 IPR003660 HAMP domain CDA09_01850 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01850 IPR001789 Signal transduction response regulator, receiver domain CDA09_01855 IPR028082 Periplasmic binding protein-like I CDA09_01855 IPR000709 Leu/Ile/Val-binding protein CDA09_01855 IPR028081 Leucine-binding protein domain CDA09_01865 IPR011006 CheY-like superfamily CDA09_01865 IPR001789 Signal transduction response regulator, receiver domain CDA09_01865 IPR007492 LytTR DNA-binding domain CDA09_01875 IPR003660 HAMP domain CDA09_01875 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_01875 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_01875 IPR011006 CheY-like superfamily CDA09_01875 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_01875 IPR005467 Histidine kinase domain CDA09_01875 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_01875 IPR019247 Histidine kinase BarA, N-terminal CDA09_01875 IPR036641 HPT domain superfamily CDA09_01875 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDA09_01875 IPR001789 Signal transduction response regulator, receiver domain CDA09_01875 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_01880 IPR000160 GGDEF domain CDA09_01880 IPR001633 EAL domain CDA09_01880 IPR035919 EAL domain superfamily CDA09_01880 IPR003018 GAF domain CDA09_01880 IPR029016 GAF-like domain superfamily CDA09_01880 IPR029787 Nucleotide cyclase CDA09_01880 IPR016132 Phytochrome chromophore attachment domain CDA09_01880 IPR001294 Phytochrome CDA09_01880 IPR013515 Phytochrome, central region CDA09_01890 IPR036390 Winged helix DNA-binding domain superfamily CDA09_01890 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_01890 IPR000847 Transcription regulator HTH, LysR CDA09_01890 IPR005119 LysR, substrate-binding CDA09_01895 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase CDA09_01895 IPR036291 NAD(P)-binding domain superfamily CDA09_01915 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDA09_01915 IPR017927 FAD-binding domain, ferredoxin reductase-type CDA09_01915 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDA09_01915 IPR033892 Ferredoxin--NADP reductase, bacteria CDA09_01915 IPR017938 Riboflavin synthase-like beta-barrel CDA09_01915 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDA09_01915 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_01930 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CDA09_01930 IPR001505 Copper centre Cu(A) CDA09_01930 IPR008972 Cupredoxin CDA09_01930 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CDA09_01935 IPR000883 Cytochrome c oxidase subunit I CDA09_01935 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CDA09_01935 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CDA09_01935 IPR023616 Cytochrome c oxidase-like, subunit I domain CDA09_01945 IPR024791 Cytochrome c oxidase subunit III CDA09_01945 IPR000298 Cytochrome c oxidase subunit III-like CDA09_01945 IPR035973 Cytochrome c oxidase subunit III-like superfamily CDA09_01945 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CDA09_01960 IPR022301 Integral membrane protein YjbE CDA09_01960 IPR005496 Integral membrane protein TerC CDA09_01975 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain CDA09_01980 IPR005981 ABC-2 type transporter, NodJ CDA09_01980 IPR013525 ABC-2 type transporter CDA09_01980 IPR000412 ABC-2 transporter CDA09_01990 IPR004046 Glutathione S-transferase, C-terminal CDA09_01990 IPR004045 Glutathione S-transferase, N-terminal CDA09_01990 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_01990 IPR010987 Glutathione S-transferase, C-terminal-like CDA09_01990 IPR034343 Uncharacterized GST-like protein YibF CDA09_01990 IPR036249 Thioredoxin-like superfamily CDA09_01995 IPR000073 Alpha/beta hydrolase fold-1 CDA09_01995 IPR029058 Alpha/Beta hydrolase fold CDA09_02000 IPR036249 Thioredoxin-like superfamily CDA09_02040 IPR000160 GGDEF domain CDA09_02040 IPR029787 Nucleotide cyclase CDA09_02040 IPR001633 EAL domain CDA09_02040 IPR035919 EAL domain superfamily CDA09_02040 IPR005330 MHYT domain CDA09_02045 IPR036249 Thioredoxin-like superfamily CDA09_02045 IPR024705 Spermatogenesis-associated protein 20 CDA09_02045 IPR004879 Domain of unknown function DUF255 CDA09_02045 IPR012341 Six-hairpin glycosidase-like superfamily CDA09_02045 IPR008928 Six-hairpin glycosidase superfamily CDA09_02065 IPR024370 PBP domain CDA09_02075 IPR005670 Phosphate transport system permease protein 1 CDA09_02075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02075 IPR015850 ABC transporter, phosphate import, PstB CDA09_02075 IPR003593 AAA+ ATPase domain CDA09_02075 IPR003439 ABC transporter-like CDA09_02075 IPR017871 ABC transporter, conserved site CDA09_02080 IPR005672 Phosphate transport system permease protein PstA CDA09_02080 IPR035906 MetI-like superfamily CDA09_02080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_02085 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_02085 IPR011864 Phosphate ABC transporter, permease protein PstC CDA09_02085 IPR035906 MetI-like superfamily CDA09_02090 IPR024370 PBP domain CDA09_02090 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS CDA09_02100 IPR027051 XdhC Rossmann domain CDA09_02100 IPR003777 XdhC- CoxI CDA09_02105 IPR036318 FAD-binding, type PCMH-like superfamily CDA09_02105 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_02105 IPR002346 Molybdopterin dehydrogenase, FAD-binding CDA09_02105 IPR017608 4-hydroxybenzoyl-CoA reductase, beta subunit CDA09_02105 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDA09_02105 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily CDA09_02105 IPR016166 FAD-binding domain, PCMH-type CDA09_02110 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDA09_02110 IPR017607 4-hydroxybenzoyl-CoA reductase, alpha subunit CDA09_02110 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDA09_02110 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CDA09_02110 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CDA09_02115 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_02115 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_02115 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_02115 IPR017606 4-hydroxybenzoyl-CoA reductase, gamma subunit CDA09_02115 IPR012675 Beta-grasp domain superfamily CDA09_02115 IPR036884 [2Fe-2S]-binding domain superfamily CDA09_02115 IPR002888 [2Fe-2S]-binding CDA09_02120 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_02120 IPR018146 Glyoxalase I, conserved site CDA09_02120 IPR037523 Vicinal oxygen chelate (VOC) domain CDA09_02120 IPR004361 Glyoxalase I CDA09_02120 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_02130 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CDA09_02130 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CDA09_02130 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_02145 IPR034757 Ornithine aminotransferase, bacterial type CDA09_02145 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_02145 IPR005814 Aminotransferase class-III CDA09_02145 IPR010164 Ornithine aminotransferase CDA09_02145 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_02145 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_02150 IPR011009 Protein kinase-like domain superfamily CDA09_02150 IPR004147 UbiB domain CDA09_02150 IPR010232 Probable protein kinase UbiB CDA09_02150 IPR000719 Protein kinase domain CDA09_02155 IPR001278 Arginine-tRNA ligase CDA09_02155 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CDA09_02155 IPR008909 DALR anticodon binding CDA09_02155 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily CDA09_02155 IPR035684 Arginyl-tRNA synthetase, catalytic core domain CDA09_02155 IPR005148 Arginyl tRNA synthetase N-terminal domain CDA09_02155 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDA09_02165 IPR017937 Thioredoxin, conserved site CDA09_02165 IPR001853 DSBA-like thioredoxin domain CDA09_02165 IPR013766 Thioredoxin domain CDA09_02165 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CDA09_02165 IPR036249 Thioredoxin-like superfamily CDA09_02170 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_02170 IPR036291 NAD(P)-binding domain superfamily CDA09_02170 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_02175 IPR028971 NAD-glutamate dehydrogenase CDA09_02175 IPR007780 NAD-glutamate dehydrogenase, bacteria CDA09_02175 IPR036291 NAD(P)-binding domain superfamily CDA09_02185 IPR020988 Peptidase U32, collagenase CDA09_02185 IPR001539 Peptidase U32 CDA09_02195 IPR023299 P-type ATPase, cytoplasmic domain N CDA09_02195 IPR018303 P-type ATPase, phosphorylation site CDA09_02195 IPR023298 P-type ATPase, transmembrane domain superfamily CDA09_02195 IPR001757 P-type ATPase CDA09_02195 IPR008250 P-type ATPase, A domain superfamily CDA09_02195 IPR027256 P-type ATPase, subfamily IB CDA09_02195 IPR036412 HAD-like superfamily CDA09_02195 IPR023214 HAD superfamily CDA09_02225 IPR018303 P-type ATPase, phosphorylation site CDA09_02225 IPR001757 P-type ATPase CDA09_02225 IPR008250 P-type ATPase, A domain superfamily CDA09_02225 IPR023214 HAD superfamily CDA09_02225 IPR023298 P-type ATPase, transmembrane domain superfamily CDA09_02225 IPR023299 P-type ATPase, cytoplasmic domain N CDA09_02225 IPR027256 P-type ATPase, subfamily IB CDA09_02225 IPR036412 HAD-like superfamily CDA09_02230 IPR003855 Potassium transporter CDA09_02230 IPR023051 Potassium uptake protein, low affinity, Kup CDA09_02235 IPR002491 ABC transporter periplasmic binding domain CDA09_02245 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain CDA09_02245 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I CDA09_02245 IPR000073 Alpha/beta hydrolase fold-1 CDA09_02245 IPR029058 Alpha/Beta hydrolase fold CDA09_02250 IPR001279 Metallo-beta-lactamase CDA09_02250 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_02255 IPR011789 Cu(I)-responsive transcriptional regulator CDA09_02255 IPR009061 Putative DNA-binding domain superfamily CDA09_02255 IPR000551 MerR-type HTH domain CDA09_02260 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CDA09_02260 IPR001765 Carbonic anhydrase CDA09_02260 IPR036874 Carbonic anhydrase superfamily CDA09_02265 IPR002155 Thiolase CDA09_02265 IPR020616 Thiolase, N-terminal CDA09_02265 IPR020617 Thiolase, C-terminal CDA09_02265 IPR020610 Thiolase, active site CDA09_02265 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_02265 IPR016039 Thiolase-like CDA09_02265 IPR020613 Thiolase, conserved site CDA09_02270 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_02270 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_02270 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_02270 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_02270 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_02270 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_02270 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_02275 IPR029045 ClpP/crotonase-like domain superfamily CDA09_02275 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_02275 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_02275 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_02280 IPR013785 Aldolase-type TIM barrel CDA09_02280 IPR000891 Pyruvate carboxyltransferase CDA09_02280 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site CDA09_02295 IPR017782 Hydroxyacylglutathione hydrolase CDA09_02295 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CDA09_02295 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_02295 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CDA09_02295 IPR001279 Metallo-beta-lactamase CDA09_02300 IPR005337 RapZ-like family CDA09_02300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02320 IPR036397 Ribonuclease H superfamily CDA09_02320 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CDA09_02320 IPR002176 Crossover junction endodeoxyribonuclease RuvC CDA09_02320 IPR012337 Ribonuclease H-like superfamily CDA09_02335 IPR023954 C4-dicarboxylate transport protein CDA09_02335 IPR018107 Sodium:dicarboxylate symporter, conserved site CDA09_02335 IPR001991 Sodium:dicarboxylate symporter CDA09_02335 IPR036458 Sodium:dicarboxylate symporter superfamily CDA09_02345 IPR029072 YebC-like CDA09_02345 IPR017856 Integrase-like, N-terminal CDA09_02345 IPR026564 Transcriptional regulator TACO1-like, domain 3 CDA09_02345 IPR002876 Transcriptional regulator TACO1-like CDA09_02355 IPR033186 Helicase HerA-like C-terminal CDA09_02355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02370 IPR004090 Chemotaxis methyl-accepting receptor CDA09_02370 IPR003660 HAMP domain CDA09_02370 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDA09_02375 IPR029041 FAD-linked oxidoreductase-like CDA09_02375 IPR004620 5,10-methylenetetrahydrofolate reductase CDA09_02375 IPR003171 Methylenetetrahydrofolate reductase CDA09_02380 IPR000043 Adenosylhomocysteinase-like CDA09_02380 IPR036291 NAD(P)-binding domain superfamily CDA09_02380 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site CDA09_02380 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CDA09_02380 IPR042172 Adenosylhomocysteinase-like superfamily CDA09_02390 IPR012156 Cold shock, CspA CDA09_02390 IPR011129 Cold shock domain CDA09_02390 IPR019844 Cold-shock (CSD) domain CDA09_02390 IPR002059 Cold-shock protein, DNA-binding CDA09_02390 IPR012340 Nucleic acid-binding, OB-fold CDA09_02395 IPR004368 Translation initiation factor IF-1 CDA09_02395 IPR006196 RNA-binding domain, S1, IF1 type CDA09_02395 IPR012340 Nucleic acid-binding, OB-fold CDA09_02405 IPR022629 S-adenosylmethionine synthetase, central domain CDA09_02405 IPR022636 S-adenosylmethionine synthetase superfamily CDA09_02405 IPR002133 S-adenosylmethionine synthetase CDA09_02405 IPR022631 S-adenosylmethionine synthetase, conserved site CDA09_02405 IPR022630 S-adenosylmethionine synthetase, C-terminal CDA09_02405 IPR022628 S-adenosylmethionine synthetase, N-terminal CDA09_02415 IPR004960 Bacterial lipid A biosynthesis acyltransferase CDA09_02415 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CDA09_02420 IPR018510 Diaminopimelate epimerase, active site CDA09_02420 IPR001653 Diaminopimelate epimerase, DapF CDA09_02430 IPR011931 Tyrosine recombinase XerC CDA09_02430 IPR002104 Integrase, catalytic domain CDA09_02430 IPR010998 Integrase/recombinase, N-terminal CDA09_02430 IPR004107 Integrase, SAM-like, N-terminal CDA09_02430 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_02430 IPR023009 Tyrosine recombinase XerC/XerD CDA09_02430 IPR013762 Integrase-like, catalytic domain superfamily CDA09_02440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_02440 IPR002478 PUA domain CDA09_02440 IPR019614 S-adenosylmethionine-dependent methyltransferase CDA09_02440 IPR023542 rRNA large subunit methyltransferase I CDA09_02440 IPR041532 RlmI, PUA-like domain CDA09_02440 IPR036974 PUA domain superfamily CDA09_02440 IPR015947 PUA-like superfamily CDA09_02450 IPR008824 RuvB-like P-loop domain CDA09_02450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02450 IPR004605 DNA helicase, Holliday junction RuvB-type CDA09_02450 IPR041445 RuvB, AAA lid domain CDA09_02450 IPR003593 AAA+ ATPase domain CDA09_02450 IPR036390 Winged helix DNA-binding domain superfamily CDA09_02450 IPR008823 RuvB C-terminal winged helix domain CDA09_02450 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_02455 IPR010994 RuvA domain 2-like CDA09_02455 IPR000085 Bacterial DNA recombination protein RuvA CDA09_02455 IPR012340 Nucleic acid-binding, OB-fold CDA09_02455 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CDA09_02455 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CDA09_02455 IPR011114 Holliday junction DNA helicase RuvA, C-terminal CDA09_02455 IPR036267 RuvA, C-terminal domain superfamily CDA09_02465 IPR004659 Ribonuclease E/G CDA09_02465 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CDA09_02465 IPR012340 Nucleic acid-binding, OB-fold CDA09_02465 IPR003029 S1 domain CDA09_02465 IPR022967 RNA-binding domain, S1 CDA09_02470 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CDA09_02470 IPR029001 Inosine triphosphate pyrophosphatase-like CDA09_02475 IPR029028 Alpha/beta knot methyltransferases CDA09_02475 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_02475 IPR003742 RNA methyltransferase RlmH CDA09_02480 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CDA09_02485 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_02485 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase CDA09_02485 IPR004821 Cytidyltransferase-like domain CDA09_02500 IPR002575 Aminoglycoside phosphotransferase CDA09_02500 IPR011009 Protein kinase-like domain superfamily CDA09_02500 IPR005280 Homoserine kinase, type II CDA09_02510 IPR031100 LOG family CDA09_02510 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CDA09_02515 IPR036397 Ribonuclease H superfamily CDA09_02515 IPR002562 3'-5' exonuclease domain CDA09_02515 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CDA09_02515 IPR002298 DNA polymerase A CDA09_02515 IPR020045 DNA polymerase I-like, H3TH domain CDA09_02515 IPR001098 DNA-directed DNA polymerase, family A, palm domain CDA09_02515 IPR019760 DNA-directed DNA polymerase, family A, conserved site CDA09_02515 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CDA09_02515 IPR002421 5'-3' exonuclease, N-terminal CDA09_02515 IPR008918 Helix-hairpin-helix motif, class 2 CDA09_02515 IPR029060 PIN-like domain superfamily CDA09_02515 IPR012337 Ribonuclease H-like superfamily CDA09_02515 IPR018320 DNA polymerase 1 CDA09_02520 IPR003696 Carbamoyltransferase CDA09_02520 IPR031730 Carbamoyltransferase, C-terminal CDA09_02520 IPR038152 Carbamoyltransferase, C-terminal domain superfamily CDA09_02525 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDA09_02525 IPR002509 NodB homology domain CDA09_02535 IPR017814 Mycothiol biosynthesis protein, MshA CDA09_02535 IPR001296 Glycosyl transferase, family 1 CDA09_02535 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CDA09_02540 IPR002201 Glycosyl transferase, family 9 CDA09_02540 IPR011908 Lipopolysaccharide heptosyltransferase I CDA09_02550 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CDA09_02550 IPR001296 Glycosyl transferase, family 1 CDA09_02555 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CDA09_02560 IPR001296 Glycosyl transferase, family 1 CDA09_02570 IPR033738 Asparagine synthase, N-terminal domain CDA09_02570 IPR001962 Asparagine synthase CDA09_02570 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_02570 IPR017932 Glutamine amidotransferase type 2 domain CDA09_02570 IPR006426 Asparagine synthase, glutamine-hydrolyzing CDA09_02575 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CDA09_02575 IPR001296 Glycosyl transferase, family 1 CDA09_02585 IPR003439 ABC transporter-like CDA09_02585 IPR036640 ABC transporter type 1, transmembrane domain superfamily CDA09_02585 IPR003593 AAA+ ATPase domain CDA09_02585 IPR011917 ABC transporter, lipid A export, MsbA CDA09_02585 IPR011527 ABC transporter type 1, transmembrane domain CDA09_02585 IPR039421 Type I protein exporter CDA09_02585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02585 IPR017871 ABC transporter, conserved site CDA09_02595 IPR001509 NAD-dependent epimerase/dehydratase CDA09_02595 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase CDA09_02595 IPR036291 NAD(P)-binding domain superfamily CDA09_02600 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CDA09_02600 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_02600 IPR011611 Carbohydrate kinase PfkB CDA09_02600 IPR011913 RfaE bifunctional protein, domain I CDA09_02600 IPR011914 RfaE bifunctional protein, domain II CDA09_02600 IPR029056 Ribokinase-like CDA09_02600 IPR004821 Cytidyltransferase-like domain CDA09_02600 IPR023030 Bifunctional protein HldE CDA09_02605 IPR007848 Methyltransferase small domain CDA09_02605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_02605 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CDA09_02605 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CDA09_02605 IPR004556 Methyltransferase HemK-like CDA09_02605 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDA09_02610 IPR003805 Adenosylcobinamide-GDP ribazoletransferase CDA09_02615 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily CDA09_02615 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic CDA09_02615 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal CDA09_02615 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like CDA09_02620 IPR035919 EAL domain superfamily CDA09_02620 IPR000160 GGDEF domain CDA09_02620 IPR005330 MHYT domain CDA09_02620 IPR029787 Nucleotide cyclase CDA09_02620 IPR001633 EAL domain CDA09_02625 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02625 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase CDA09_02635 IPR037294 ABC transporter, BtuC-like CDA09_02635 IPR000522 ABC transporter, permease protein, BtuC-like CDA09_02635 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC CDA09_02640 IPR015863 ABC transporter, hemin import, HmuV CDA09_02640 IPR003593 AAA+ ATPase domain CDA09_02640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02640 IPR003439 ABC transporter-like CDA09_02645 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR CDA09_02645 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain CDA09_02645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02650 IPR000878 Tetrapyrrole methylase CDA09_02650 IPR035996 Tetrapyrrole methylase superfamily CDA09_02650 IPR006366 Uroporphyrin-III C-methyltransferase CDA09_02650 IPR036291 NAD(P)-binding domain superfamily CDA09_02650 IPR037115 Sirohaem synthase, dimerisation domain superfamily CDA09_02650 IPR012409 Sirohaem synthase CDA09_02650 IPR028281 Siroheme synthase, central domain CDA09_02650 IPR006367 Sirohaem synthase, N-terminal CDA09_02650 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CDA09_02650 IPR014776 Tetrapyrrole methylase, subdomain 2 CDA09_02650 IPR019478 Sirohaem synthase, dimerisation domain CDA09_02650 IPR014777 Tetrapyrrole methylase, subdomain 1 CDA09_02655 IPR017929 CobB/CobQ glutamine amidotransferase CDA09_02655 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDA09_02655 IPR011698 CobB/CobQ-like glutamine amidotransferase CDA09_02655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02655 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA CDA09_02655 IPR029062 Class I glutamine amidotransferase-like CDA09_02660 IPR011257 DNA glycosylase CDA09_02660 IPR004597 DNA-3-methyladenine glycosylase I CDA09_02660 IPR005019 Methyladenine glycosylase CDA09_02665 IPR036390 Winged helix DNA-binding domain superfamily CDA09_02665 IPR000847 Transcription regulator HTH, LysR CDA09_02665 IPR005119 LysR, substrate-binding CDA09_02665 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_02670 IPR007431 Acyl carrier protein phosphodiesterase CDA09_02670 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria CDA09_02680 IPR037171 NagB/RpiA transferase-like CDA09_02680 IPR003741 LUD domain CDA09_02680 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CDA09_02685 IPR003741 LUD domain CDA09_02685 IPR024569 4Fe-4S binding protein, C-terminal CDA09_02685 IPR037171 NagB/RpiA transferase-like CDA09_02685 IPR022825 Lactate utilization protein B CDA09_02685 IPR009051 Alpha-helical ferredoxin CDA09_02685 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CDA09_02685 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_02685 IPR004452 4Fe-4S binding protein CDA09_02685 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_02690 IPR004017 Cysteine-rich domain CDA09_02690 IPR022822 Lactate utilization protein A CDA09_02695 IPR000620 EamA domain CDA09_02705 IPR005119 LysR, substrate-binding CDA09_02705 IPR000847 Transcription regulator HTH, LysR CDA09_02705 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_02705 IPR036390 Winged helix DNA-binding domain superfamily CDA09_02710 IPR022946 Uncharacterised protein family UPF0313 CDA09_02710 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_02710 IPR007197 Radical SAM CDA09_02710 IPR020612 Methylthiotransferase, conserved site CDA09_02710 IPR006638 Elp3/MiaB/NifB CDA09_02710 IPR013704 Uncharacterised protein family UPF0313, N-terminal CDA09_02710 IPR024560 Uncharacterised protein family UPF0313, C-terminal CDA09_02715 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CDA09_02715 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CDA09_02720 IPR024570 Murein transglycosylase-C, N-terminal CDA09_02720 IPR023346 Lysozyme-like domain superfamily CDA09_02720 IPR023664 Murein transglycosylase-C CDA09_02720 IPR000189 Prokaryotic transglycosylase, active site CDA09_02720 IPR008258 Transglycosylase SLT domain 1 CDA09_02725 IPR004839 Aminotransferase, class I/classII CDA09_02725 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_02725 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_02725 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_02725 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CDA09_02735 IPR002505 Phosphate acetyl/butaryl transferase CDA09_02735 IPR042112 Phosphate acetyltransferase, domain 2 CDA09_02735 IPR037062 Malic enzyme, N-terminal domain superfamily CDA09_02735 IPR012301 Malic enzyme, N-terminal domain CDA09_02735 IPR015884 Malic enzyme, conserved site CDA09_02735 IPR042113 Phosphate acetyltransferase, domain 1 CDA09_02735 IPR012188 NAD(P)-dependent malic enzyme CDA09_02735 IPR012302 Malic enzyme, NAD-binding CDA09_02735 IPR036291 NAD(P)-binding domain superfamily CDA09_02745 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CDA09_02745 IPR012338 Beta-lactamase/transpeptidase-like CDA09_02745 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CDA09_02755 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CDA09_02755 IPR006145 Pseudouridine synthase, RsuA/RluA CDA09_02755 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CDA09_02755 IPR036986 RNA-binding S4 domain superfamily CDA09_02755 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CDA09_02755 IPR002942 RNA-binding S4 domain CDA09_02755 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDA09_02765 IPR003593 AAA+ ATPase domain CDA09_02765 IPR017871 ABC transporter, conserved site CDA09_02765 IPR025857 MacB-like periplasmic core domain CDA09_02765 IPR003838 ABC transporter permease protein domain CDA09_02765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02765 IPR017911 ABC transporter, macrolide export, ATP-binding domain CDA09_02765 IPR003439 ABC transporter-like CDA09_02770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02770 IPR017871 ABC transporter, conserved site CDA09_02770 IPR025857 MacB-like periplasmic core domain CDA09_02770 IPR017911 ABC transporter, macrolide export, ATP-binding domain CDA09_02770 IPR003439 ABC transporter-like CDA09_02770 IPR003838 ABC transporter permease protein domain CDA09_02770 IPR003593 AAA+ ATPase domain CDA09_02775 IPR025857 MacB-like periplasmic core domain CDA09_02775 IPR017911 ABC transporter, macrolide export, ATP-binding domain CDA09_02775 IPR017871 ABC transporter, conserved site CDA09_02775 IPR003838 ABC transporter permease protein domain CDA09_02775 IPR003593 AAA+ ATPase domain CDA09_02775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02775 IPR003439 ABC transporter-like CDA09_02780 IPR010129 Type I secretion membrane fusion protein, HlyD family CDA09_02780 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_02785 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CDA09_02785 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CDA09_02785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_02785 IPR022861 Glutamine-tRNA ligase, bacterial CDA09_02785 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CDA09_02785 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain CDA09_02785 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDA09_02785 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily CDA09_02785 IPR004514 Glutamine-tRNA synthetase CDA09_02785 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CDA09_02790 IPR003691 Putative fluoride ion transporter CrcB CDA09_02810 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_02810 IPR007502 Helicase-associated domain CDA09_02810 IPR011709 Domain of unknown function DUF1605 CDA09_02810 IPR001650 Helicase, C-terminal CDA09_02810 IPR003593 AAA+ ATPase domain CDA09_02810 IPR024590 RNA helicase HrpA, C-terminal CDA09_02810 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02810 IPR010222 RNA helicase HrpA CDA09_02810 IPR011545 DEAD/DEAH box helicase domain CDA09_02815 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CDA09_02815 IPR035980 Ribosomal protein S6 superfamily CDA09_02815 IPR020814 Ribosomal protein S6, plastid/chloroplast CDA09_02815 IPR000529 Ribosomal protein S6 CDA09_02820 IPR012340 Nucleic acid-binding, OB-fold CDA09_02820 IPR023646 Primosomal replication protein PriB CDA09_02820 IPR000424 Primosome PriB/single-strand DNA-binding CDA09_02825 IPR001648 Ribosomal protein S18 CDA09_02825 IPR036870 Ribosomal protein S18 superfamily CDA09_02830 IPR036935 Ribosomal protein L9, N-terminal domain superfamily CDA09_02830 IPR020070 Ribosomal protein L9, N-terminal CDA09_02830 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CDA09_02830 IPR000244 Ribosomal protein L9 CDA09_02830 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CDA09_02830 IPR020069 Ribosomal protein L9, C-terminal CDA09_02830 IPR020594 Ribosomal protein L9, bacteria/chloroplast CDA09_02835 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CDA09_02835 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CDA09_02835 IPR007693 DNA helicase, DnaB-like, N-terminal CDA09_02835 IPR007694 DNA helicase, DnaB-like, C-terminal CDA09_02835 IPR007692 DNA helicase, DnaB type CDA09_02835 IPR003593 AAA+ ATPase domain CDA09_02835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02865 IPR013094 Alpha/beta hydrolase fold-3 CDA09_02865 IPR029058 Alpha/Beta hydrolase fold CDA09_02870 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CDA09_02870 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CDA09_02870 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CDA09_02870 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CDA09_02870 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CDA09_02870 IPR036291 NAD(P)-binding domain superfamily CDA09_02870 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_02870 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CDA09_02895 IPR023353 LemA-like domain superfamily CDA09_02895 IPR007156 LemA CDA09_02905 IPR011032 GroES-like superfamily CDA09_02905 IPR013149 Alcohol dehydrogenase, C-terminal CDA09_02905 IPR014188 Acrylyl-CoA reductase AcuI CDA09_02905 IPR036291 NAD(P)-binding domain superfamily CDA09_02905 IPR020843 Polyketide synthase, enoylreductase domain CDA09_02910 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_02910 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_02910 IPR011006 CheY-like superfamily CDA09_02910 IPR001789 Signal transduction response regulator, receiver domain CDA09_02910 IPR039420 Transcriptional regulatory protein WalR-like CDA09_02910 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_02915 IPR020845 AMP-binding, conserved site CDA09_02915 IPR000873 AMP-dependent synthetase/ligase CDA09_02915 IPR042099 AMP-dependent synthetase-like superfamily CDA09_02915 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_02915 IPR012694 Propionate--CoA ligase CDA09_02915 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain CDA09_02925 IPR023346 Lysozyme-like domain superfamily CDA09_02925 IPR000189 Prokaryotic transglycosylase, active site CDA09_02925 IPR008258 Transglycosylase SLT domain 1 CDA09_02930 IPR018076 Type II secretion system F domain CDA09_02930 IPR001992 Type II secretion system conserved site CDA09_02930 IPR003004 GspF/PilC family CDA09_02930 IPR042094 Type II secretion system F domain superfamily CDA09_02935 IPR042181 Type II secretion system, protein E, N-terminal CDA09_02935 IPR001482 Type II/IV secretion system protein CDA09_02935 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02935 IPR013369 Type II secretion system GspE CDA09_02935 IPR037257 General secretory system II, protein E, N-terminal superfamily CDA09_02955 IPR013356 Type II secretion system GspD CDA09_02955 IPR004846 Type II/III secretion system CDA09_02955 IPR038591 NolW-like superfamily CDA09_02955 IPR005644 NolW-like CDA09_02955 IPR001775 GspD/PilQ family CDA09_02955 IPR004845 Type II secretion system GspD, conserved site CDA09_02960 IPR013545 Type II secretion system protein G CDA09_02960 IPR010054 General secretion pathway protein G CDA09_02960 IPR012902 Prokaryotic N-terminal methylation site CDA09_02960 IPR000983 Bacterial general secretion pathway protein G-type pilin CDA09_02965 IPR012902 Prokaryotic N-terminal methylation site CDA09_02965 IPR001082 Fimbrial protein pilin CDA09_02975 IPR036974 PUA domain superfamily CDA09_02975 IPR015947 PUA-like superfamily CDA09_02975 IPR002478 PUA domain CDA09_02975 IPR019797 Glutamate 5-kinase, conserved site CDA09_02975 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CDA09_02975 IPR011529 Glutamate 5-kinase CDA09_02975 IPR001057 Glutamate/acetylglutamate kinase CDA09_02975 IPR001048 Aspartate/glutamate/uridylate kinase CDA09_02975 IPR036393 Acetylglutamate kinase-like superfamily CDA09_02975 IPR041739 Glutamate-5-kinase domain CDA09_02980 IPR006074 GTP1/OBG, conserved site CDA09_02980 IPR006169 GTP1/OBG domain CDA09_02980 IPR036726 GTP1/OBG domain superfamily CDA09_02980 IPR006073 GTP binding domain CDA09_02980 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_02980 IPR035101 GTP-binding protein, Obg-type CDA09_02980 IPR031167 OBG-type guanine nucleotide-binding (G) domain CDA09_02980 IPR014100 GTP-binding protein Obg/CgtA CDA09_02985 IPR018261 Ribosomal protein L27, conserved site CDA09_02985 IPR001684 Ribosomal protein L27 CDA09_02990 IPR018258 Ribosomal protein L21, conserved site CDA09_02990 IPR028909 Ribosomal protein L21-like CDA09_02990 IPR001787 Ribosomal protein L21 CDA09_02990 IPR036164 L21-like superfamily CDA09_02995 IPR014178 Fatty acid response transcription factor FadR CDA09_02995 IPR028374 FadR, C-terminal domain CDA09_02995 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_02995 IPR000524 Transcription regulator HTH, GntR CDA09_02995 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_02995 IPR036390 Winged helix DNA-binding domain superfamily CDA09_03000 IPR004113 FAD-linked oxidase, C-terminal CDA09_03000 IPR016166 FAD-binding domain, PCMH-type CDA09_03000 IPR006094 FAD linked oxidase, N-terminal CDA09_03000 IPR004490 Glycolate oxidase subunit GlcD CDA09_03000 IPR036318 FAD-binding, type PCMH-like superfamily CDA09_03000 IPR016164 FAD-linked oxidase-like, C-terminal CDA09_03000 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDA09_03005 IPR006094 FAD linked oxidase, N-terminal CDA09_03005 IPR016164 FAD-linked oxidase-like, C-terminal CDA09_03005 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_03005 IPR036318 FAD-binding, type PCMH-like superfamily CDA09_03005 IPR016166 FAD-binding domain, PCMH-type CDA09_03010 IPR012257 Glycolate oxidase, iron-sulphur subunit CDA09_03010 IPR004017 Cysteine-rich domain CDA09_03010 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_03010 IPR009051 Alpha-helical ferredoxin CDA09_03010 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_03015 IPR015655 Protein phosphatase 2C family CDA09_03015 IPR001932 PPM-type phosphatase domain CDA09_03015 IPR036457 PPM-type phosphatase domain superfamily CDA09_03020 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CDA09_03020 IPR004488 Magnesium/cobalt transport protein CorA CDA09_03025 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CDA09_03025 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CDA09_03025 IPR036291 NAD(P)-binding domain superfamily CDA09_03025 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CDA09_03025 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CDA09_03030 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CDA09_03035 IPR034300 NADP transhydrogenase beta-like domain CDA09_03035 IPR012136 NADP transhydrogenase, beta subunit CDA09_03035 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_03045 IPR001633 EAL domain CDA09_03045 IPR000160 GGDEF domain CDA09_03045 IPR005330 MHYT domain CDA09_03045 IPR035965 PAS domain superfamily CDA09_03045 IPR029787 Nucleotide cyclase CDA09_03045 IPR000014 PAS domain CDA09_03045 IPR035919 EAL domain superfamily CDA09_03050 IPR001650 Helicase, C-terminal CDA09_03050 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_03050 IPR011545 DEAD/DEAH box helicase domain CDA09_03050 IPR028622 ATP-dependent RNA helicase RhlE CDA09_03050 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03050 IPR014014 RNA helicase, DEAD-box type, Q motif CDA09_03050 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDA09_03055 IPR011224 Ribosomal RNA large subunit methyltransferase M CDA09_03055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_03055 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CDA09_03055 IPR040739 RlmM ferredoxin-like domain CDA09_03070 IPR030395 Glycerophosphodiester phosphodiesterase domain CDA09_03070 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CDA09_03075 IPR008949 Isoprenoid synthase domain superfamily CDA09_03075 IPR000092 Polyprenyl synthetase CDA09_03075 IPR033749 Polyprenyl synthetase, conserved site CDA09_03090 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDA09_03090 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDA09_03090 IPR023480 Uncharacterised protein family UPF0312/YceI CDA09_03095 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily CDA09_03095 IPR013024 Gamma-glutamyl cyclotransferase-like CDA09_03095 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase CDA09_03105 IPR011031 Multihaem cytochrome CDA09_03105 IPR036280 Multiheme cytochrome superfamily CDA09_03105 IPR020015 Decaheme cytochrome, c-type, DmsE CDA09_03105 IPR010177 Doubled CXXCH motif CDA09_03110 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT CDA09_03110 IPR038266 NapC/NirT cytochrome c superfamily CDA09_03110 IPR036280 Multiheme cytochrome superfamily CDA09_03110 IPR005126 NapC/NirT cytochrome c, N-terminal CDA09_03110 IPR011031 Multihaem cytochrome CDA09_03110 IPR024717 Denitrification system component NapC/NirT/NrfH CDA09_03115 IPR009056 Cytochrome c-like domain CDA09_03115 IPR002324 Cytochrome c, class ID CDA09_03115 IPR036909 Cytochrome c-like domain superfamily CDA09_03120 IPR005119 LysR, substrate-binding CDA09_03120 IPR000847 Transcription regulator HTH, LysR CDA09_03120 IPR036390 Winged helix DNA-binding domain superfamily CDA09_03120 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03125 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain CDA09_03125 IPR014710 RmlC-like jelly roll fold CDA09_03125 IPR011051 RmlC-like cupin domain superfamily CDA09_03125 IPR003829 Pirin, N-terminal domain CDA09_03125 IPR012093 Pirin CDA09_03130 IPR005829 Sugar transporter, conserved site CDA09_03130 IPR004736 MFS transporter, metabolite:H symporter CDA09_03130 IPR036259 MFS transporter superfamily CDA09_03130 IPR020846 Major facilitator superfamily domain CDA09_03130 IPR011701 Major facilitator superfamily CDA09_03135 IPR011650 Peptidase M20, dimerisation domain CDA09_03135 IPR002933 Peptidase M20 CDA09_03135 IPR017439 Amidohydrolase CDA09_03135 IPR036264 Bacterial exopeptidase dimerisation domain CDA09_03140 IPR005119 LysR, substrate-binding CDA09_03140 IPR000847 Transcription regulator HTH, LysR CDA09_03140 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03140 IPR036390 Winged helix DNA-binding domain superfamily CDA09_03150 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_03150 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CDA09_03150 IPR001036 Acriflavin resistance protein CDA09_03155 IPR006143 RND efflux pump, membrane fusion protein CDA09_03155 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_03170 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03170 IPR036390 Winged helix DNA-binding domain superfamily CDA09_03170 IPR000847 Transcription regulator HTH, LysR CDA09_03170 IPR005119 LysR, substrate-binding CDA09_03175 IPR002930 Glycine cleavage system H-protein CDA09_03175 IPR033753 Glycine cleavage system H-protein/Simiate CDA09_03175 IPR000089 Biotin/lipoyl attachment CDA09_03175 IPR011053 Single hybrid motif CDA09_03175 IPR017453 Glycine cleavage system H-protein, subgroup CDA09_03175 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDA09_03180 IPR003437 Glycine dehydrogenase (decarboxylating) CDA09_03180 IPR020581 Glycine cleavage system P protein CDA09_03180 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_03180 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_03180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_03185 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_03185 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_03185 IPR001085 Serine hydroxymethyltransferase CDA09_03185 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CDA09_03185 IPR039429 Serine hydroxymethyltransferase-like domain CDA09_03185 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_03190 IPR004840 Amino acid permease, conserved site CDA09_03190 IPR004841 Amino acid permease/ SLC12A domain CDA09_03195 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CDA09_03195 IPR029009 Allosteric substrate binding domain superfamily CDA09_03195 IPR005130 Serine dehydratase-like, alpha subunit CDA09_03195 IPR005131 Serine dehydratase beta chain CDA09_03200 IPR028896 Aminomethyltransferase-like CDA09_03200 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDA09_03200 IPR006222 Aminomethyltransferase, folate-binding domain CDA09_03200 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CDA09_03200 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDA09_03200 IPR006223 Glycine cleavage system T protein CDA09_03200 IPR022903 Glycine cleavage system T protein, bacteria CDA09_03205 IPR006638 Elp3/MiaB/NifB CDA09_03205 IPR003698 Lipoyl synthase CDA09_03205 IPR013785 Aldolase-type TIM barrel CDA09_03205 IPR007197 Radical SAM CDA09_03215 IPR004810 Formyltetrahydrofolate deformylase CDA09_03215 IPR002912 ACT domain CDA09_03215 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CDA09_03215 IPR002376 Formyl transferase, N-terminal CDA09_03215 IPR036477 Formyl transferase, N-terminal domain superfamily CDA09_03220 IPR006805 Anthranilate synthase component I, N-terminal CDA09_03220 IPR005802 Aminodeoxychorismate synthase, component I CDA09_03220 IPR015890 Chorismate-utilising enzyme, C-terminal CDA09_03220 IPR019999 Anthranilate synthase component I-like CDA09_03220 IPR005801 ADC synthase CDA09_03225 IPR005482 Biotin carboxylase, C-terminal CDA09_03225 IPR005481 Biotin carboxylase-like, N-terminal domain CDA09_03225 IPR011764 Biotin carboxylation domain CDA09_03225 IPR000089 Biotin/lipoyl attachment CDA09_03225 IPR003379 Carboxylase, conserved domain CDA09_03225 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDA09_03225 IPR016185 Pre-ATP-grasp domain superfamily CDA09_03225 IPR005930 Pyruvate carboxylase CDA09_03225 IPR011761 ATP-grasp fold CDA09_03225 IPR011054 Rudiment single hybrid motif CDA09_03225 IPR011053 Single hybrid motif CDA09_03225 IPR000891 Pyruvate carboxyltransferase CDA09_03225 IPR013785 Aldolase-type TIM barrel CDA09_03265 IPR022890 Ferredoxin--NADP reductase, type 2 CDA09_03265 IPR023753 FAD/NAD(P)-binding domain CDA09_03265 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03270 IPR030374 Polyamine biosynthesis domain CDA09_03270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_03270 IPR001045 Spermidine/spermine synthases CDA09_03280 IPR002539 MaoC-like dehydratase domain CDA09_03280 IPR029069 HotDog domain superfamily CDA09_03285 IPR003801 GTP cyclohydrolase FolE2/MptA CDA09_03285 IPR022838 GTP cyclohydrolase FolE2 CDA09_03290 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_03290 IPR005477 Deoxyxylulose-5-phosphate synthase CDA09_03290 IPR029061 Thiamin diphosphate-binding fold CDA09_03290 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CDA09_03290 IPR005474 Transketolase, N-terminal CDA09_03290 IPR033248 Transketolase, C-terminal domain CDA09_03290 IPR020826 Transketolase binding site CDA09_03295 IPR000092 Polyprenyl synthetase CDA09_03295 IPR008949 Isoprenoid synthase domain superfamily CDA09_03295 IPR033749 Polyprenyl synthetase, conserved site CDA09_03300 IPR003761 Exonuclease VII, small subunit CDA09_03300 IPR037004 Exonuclease VII, small subunit superfamily CDA09_03310 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CDA09_03315 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDA09_03320 IPR001872 Peptidase A8, signal peptidase II CDA09_03325 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CDA09_03325 IPR010663 Zinc finger, FPG/IleRS-type CDA09_03325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_03325 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDA09_03325 IPR002300 Aminoacyl-tRNA synthetase, class Ia CDA09_03325 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain CDA09_03325 IPR002301 Isoleucine-tRNA ligase CDA09_03325 IPR023585 Isoleucine-tRNA ligase, type 1 CDA09_03325 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CDA09_03325 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CDA09_03330 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CDA09_03330 IPR023465 Riboflavin kinase domain superfamily CDA09_03330 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_03330 IPR015864 FAD synthetase CDA09_03330 IPR023468 Riboflavin kinase CDA09_03330 IPR002606 Riboflavin kinase, bacterial CDA09_03335 IPR021731 AMIN domain CDA09_03335 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CDA09_03335 IPR006311 Twin-arginine translocation pathway, signal sequence CDA09_03340 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CDA09_03340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03345 IPR004453 Epoxyqueuosine reductase QueG CDA09_03345 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_03345 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_03345 IPR013542 Domain of unknown function DUF1730 CDA09_03345 IPR009051 Alpha-helical ferredoxin CDA09_03350 IPR033134 Asp/Glu racemase, active site 2 CDA09_03350 IPR015942 Asp/Glu/hydantoin racemase CDA09_03350 IPR001920 Asp/Glu racemase CDA09_03350 IPR004391 Glutamate racemase CDA09_03355 IPR001763 Rhodanese-like domain CDA09_03355 IPR036873 Rhodanese-like domain superfamily CDA09_03355 IPR001307 Thiosulphate sulfurtransferase, conserved site CDA09_03365 IPR000620 EamA domain CDA09_03370 IPR000577 Carbohydrate kinase, FGGY CDA09_03370 IPR018483 Carbohydrate kinase, FGGY, conserved site CDA09_03370 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDA09_03370 IPR005999 Glycerol kinase CDA09_03370 IPR018485 Carbohydrate kinase, FGGY, C-terminal CDA09_03375 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CDA09_03375 IPR031656 Alpha-glycerophosphate oxidase, C-terminal CDA09_03375 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily CDA09_03375 IPR006076 FAD dependent oxidoreductase CDA09_03375 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03385 IPR036390 Winged helix DNA-binding domain superfamily CDA09_03385 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03385 IPR000847 Transcription regulator HTH, LysR CDA09_03385 IPR005119 LysR, substrate-binding CDA09_03390 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_03390 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_03390 IPR005467 Histidine kinase domain CDA09_03390 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_03390 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_03390 IPR003660 HAMP domain CDA09_03390 IPR038515 CpxA, periplasmic domain superfamily CDA09_03390 IPR032404 Two-component sensor protein CpxA, periplasmic domain CDA09_03390 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_03395 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_03395 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03395 IPR039420 Transcriptional regulatory protein WalR-like CDA09_03395 IPR001789 Signal transduction response regulator, receiver domain CDA09_03395 IPR011006 CheY-like superfamily CDA09_03395 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_03405 IPR006254 Isocitrate lyase CDA09_03405 IPR039556 ICL/PEPM domain CDA09_03405 IPR040442 Pyruvate kinase-like domain superfamily CDA09_03405 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDA09_03405 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CDA09_03410 IPR010203 Regulator of ribonuclease activity A CDA09_03410 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CDA09_03410 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CDA09_03415 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA CDA09_03415 IPR001270 ClpA/B family CDA09_03415 IPR018368 ClpA/B, conserved site 1 CDA09_03415 IPR028299 ClpA/B, conserved site 2 CDA09_03415 IPR041546 ClpA/ClpB, AAA lid domain CDA09_03415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03415 IPR036628 Clp, N-terminal domain superfamily CDA09_03415 IPR019489 Clp ATPase, C-terminal CDA09_03415 IPR004176 Clp, N-terminal CDA09_03415 IPR003959 ATPase, AAA-type, core CDA09_03415 IPR003593 AAA+ ATPase domain CDA09_03420 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CDA09_03420 IPR003769 Adaptor protein ClpS, core CDA09_03420 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDA09_03425 IPR012340 Nucleic acid-binding, OB-fold CDA09_03425 IPR002059 Cold-shock protein, DNA-binding CDA09_03425 IPR019844 Cold-shock (CSD) domain CDA09_03425 IPR011129 Cold shock domain CDA09_03425 IPR012156 Cold shock, CspA CDA09_03430 IPR018264 Ribosomal protein L33, conserved site CDA09_03430 IPR001705 Ribosomal protein L33 CDA09_03430 IPR038584 Ribosomal protein L33 superfamily CDA09_03430 IPR011332 Zinc-binding ribosomal protein CDA09_03435 IPR001383 Ribosomal protein L28 CDA09_03435 IPR037147 Ribosomal protein L28/L24 superfamily CDA09_03435 IPR026569 Ribosomal protein L28/L24 CDA09_03435 IPR034704 L28p-like CDA09_03440 IPR037518 MPN domain CDA09_03440 IPR010994 RuvA domain 2-like CDA09_03440 IPR001405 Uncharacterised protein family UPF0758 CDA09_03440 IPR020891 Uncharacterised protein family UPF0758, conserved site CDA09_03440 IPR025657 RadC-like JAB domain CDA09_03445 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CDA09_03445 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CDA09_03445 IPR035929 CoaB-like superfamily CDA09_03445 IPR036551 Flavin prenyltransferase-like CDA09_03445 IPR003382 Flavoprotein CDA09_03450 IPR036157 dUTPase-like superfamily CDA09_03450 IPR029054 dUTPase-like CDA09_03450 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase CDA09_03450 IPR033704 dUTPase, trimeric CDA09_03455 IPR015375 NADH pyrophosphatase-like, N-terminal CDA09_03455 IPR020084 NUDIX hydrolase, conserved site CDA09_03455 IPR000086 NUDIX hydrolase domain CDA09_03455 IPR015797 NUDIX hydrolase-like domain superfamily CDA09_03455 IPR022925 NADH pyrophosphatase NudC CDA09_03455 IPR015376 Zinc ribbon, NADH pyrophosphatase CDA09_03460 IPR023753 FAD/NAD(P)-binding domain CDA09_03460 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CDA09_03460 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding CDA09_03460 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDA09_03460 IPR006311 Twin-arginine translocation pathway, signal sequence CDA09_03460 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily CDA09_03460 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03465 IPR009056 Cytochrome c-like domain CDA09_03465 IPR036909 Cytochrome c-like domain superfamily CDA09_03480 IPR010452 Isocitrate dehydrogenase kinasephosphatase CDA09_03485 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric CDA09_03490 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic CDA09_03490 IPR024084 Isopropylmalate dehydrogenase-like domain CDA09_03490 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CDA09_03500 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_03500 IPR041095 Elongation Factor G, domain II CDA09_03500 IPR009022 Elongation factor G, domain III CDA09_03500 IPR035647 EF-G domain III/V-like CDA09_03500 IPR035649 EFG, domain V CDA09_03500 IPR000795 Transcription factor, GTP-binding domain CDA09_03500 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_03500 IPR000640 Elongation factor EFG, domain V-like CDA09_03500 IPR005517 Translation elongation factor EFG/EF2, domain IV CDA09_03500 IPR004161 Translation elongation factor EFTu-like, domain 2 CDA09_03500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03500 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_03500 IPR005225 Small GTP-binding protein domain CDA09_03510 IPR007300 CidB/LrgB family CDA09_03520 IPR012910 TonB-dependent receptor, plug domain CDA09_03520 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_03520 IPR000531 TonB-dependent receptor-like, beta-barrel CDA09_03520 IPR037066 TonB-dependent receptor, plug domain superfamily CDA09_03520 IPR039426 Vitamin B12 transporter BtuB-like CDA09_03520 IPR010101 TonB-dependent vitamin B12 transporter BtuB CDA09_03535 IPR011076 Malate synthase-like superfamily CDA09_03535 IPR023310 Malate synthase G, beta sub-domain CDA09_03535 IPR006253 Malate synthase G CDA09_03535 IPR001465 Malate synthase CDA09_03545 IPR036412 HAD-like superfamily CDA09_03545 IPR006328 L-2-Haloacid dehalogenase CDA09_03545 IPR006439 HAD hydrolase, subfamily IA CDA09_03545 IPR041492 Haloacid dehalogenase-like hydrolase CDA09_03545 IPR023214 HAD superfamily CDA09_03545 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDA09_03550 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03550 IPR000847 Transcription regulator HTH, LysR CDA09_03550 IPR036390 Winged helix DNA-binding domain superfamily CDA09_03550 IPR005119 LysR, substrate-binding CDA09_03565 IPR016450 Uncharacterised conserved protein UCP005522 CDA09_03565 IPR025841 Circularly permuted ATP-grasp type 2 CDA09_03570 IPR025841 Circularly permuted ATP-grasp type 2 CDA09_03570 IPR007296 Domain of unknown function DUF403 CDA09_03585 IPR025841 Circularly permuted ATP-grasp type 2 CDA09_03585 IPR007296 Domain of unknown function DUF403 CDA09_03590 IPR038765 Papain-like cysteine peptidase superfamily CDA09_03590 IPR002931 Transglutaminase-like CDA09_03590 IPR013589 Bacterial transglutaminase-like, N-terminal CDA09_03605 IPR006531 Gp5 N-terminal CDA09_03605 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CDA09_03605 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CDA09_03605 IPR037026 Vgr protein, OB-fold domain superfamily CDA09_03605 IPR032074 Actin cross-linking domain CDA09_03660 IPR003959 ATPase, AAA-type, core CDA09_03660 IPR003593 AAA+ ATPase domain CDA09_03660 IPR019489 Clp ATPase, C-terminal CDA09_03660 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03660 IPR041546 ClpA/ClpB, AAA lid domain CDA09_03660 IPR036628 Clp, N-terminal domain superfamily CDA09_03660 IPR018368 ClpA/B, conserved site 1 CDA09_03660 IPR001270 ClpA/B family CDA09_03660 IPR004176 Clp, N-terminal CDA09_03660 IPR017729 Type VI secretion system, ATPase ClpV1 CDA09_03670 IPR007630 RNA polymerase sigma-70 region 4 CDA09_03670 IPR007624 RNA polymerase sigma-70 region 3 CDA09_03670 IPR042189 Sigma-70 factor, region 1.1 superfamily CDA09_03670 IPR013325 RNA polymerase sigma factor, region 2 CDA09_03670 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_03670 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CDA09_03670 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03670 IPR028630 RNA polymerase sigma factor RpoD CDA09_03670 IPR007627 RNA polymerase sigma-70 region 2 CDA09_03670 IPR007631 RNA polymerase sigma factor 70, non-essential domain CDA09_03670 IPR009042 RNA polymerase sigma-70 region 1.2 CDA09_03670 IPR007127 RNA polymerase sigma factor 70, region 1.1 CDA09_03670 IPR014284 RNA polymerase sigma-70 like domain CDA09_03670 IPR000943 RNA polymerase sigma-70 CDA09_03675 IPR034151 Bacterial DnaG primase, TOPRIM domain CDA09_03675 IPR030846 DNA primase DnaG, bacteria CDA09_03675 IPR036977 DNA Primase, CHC2-type zinc finger CDA09_03675 IPR013173 DNA primase DnaG, DnaB-binding domain CDA09_03675 IPR006295 DNA primase, DnaG CDA09_03675 IPR006171 TOPRIM domain CDA09_03675 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CDA09_03675 IPR013264 DNA primase, catalytic core, N-terminal CDA09_03675 IPR019475 DNA primase, DnaB-helicase binding domain CDA09_03675 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CDA09_03675 IPR002694 Zinc finger, CHC2-type CDA09_03685 IPR001911 Ribosomal protein S21 CDA09_03685 IPR018278 Ribosomal protein S21, conserved site CDA09_03685 IPR038380 Ribosomal protein S21 superfamily CDA09_03690 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CDA09_03690 IPR000905 Gcp-like domain CDA09_03690 IPR017861 Kae1/TsaD family CDA09_03695 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY CDA09_03710 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CDA09_03710 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CDA09_03710 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CDA09_03715 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_03715 IPR013762 Integrase-like, catalytic domain superfamily CDA09_03715 IPR002104 Integrase, catalytic domain CDA09_03715 IPR010998 Integrase/recombinase, N-terminal CDA09_03715 IPR023009 Tyrosine recombinase XerC/XerD CDA09_03715 IPR004107 Integrase, SAM-like, N-terminal CDA09_03715 IPR011932 Tyrosine recombinase XerD CDA09_03720 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CDA09_03720 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CDA09_03720 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CDA09_03720 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CDA09_03720 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CDA09_03720 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03720 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CDA09_03725 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_03725 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_03725 IPR000965 GPR domain CDA09_03725 IPR012134 Glutamate-5-semialdehyde dehydrogenase CDA09_03725 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CDA09_03725 IPR015590 Aldehyde dehydrogenase domain CDA09_03725 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_03730 IPR032780 DNA polymerase III subunit delta, C-terminal CDA09_03730 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CDA09_03730 IPR005790 DNA polymerase III, delta subunit CDA09_03730 IPR010372 DNA polymerase III delta, N-terminal CDA09_03730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03735 IPR007485 LPS-assembly lipoprotein LptE CDA09_03740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_03740 IPR025709 Leucyl-tRNA synthetase, editing domain CDA09_03740 IPR002300 Aminoacyl-tRNA synthetase, class Ia CDA09_03740 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDA09_03740 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CDA09_03740 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CDA09_03740 IPR002302 Leucine-tRNA ligase CDA09_03740 IPR015413 Methionyl/Leucyl tRNA synthetase CDA09_03740 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CDA09_03750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03750 IPR000212 DNA helicase, UvrD/REP type CDA09_03750 IPR034739 UvrD/AddA helicase, N-terminal CDA09_03750 IPR014016 UvrD-like helicase, ATP-binding domain CDA09_03750 IPR005753 DNA helicase, ATP-dependent, UvrD type CDA09_03750 IPR013986 DExx box DNA helicase domain superfamily CDA09_03750 IPR014017 UvrD-like DNA helicase, C-terminal CDA09_03755 IPR025669 AAA domain CDA09_03755 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03760 IPR012302 Malic enzyme, NAD-binding CDA09_03760 IPR015884 Malic enzyme, conserved site CDA09_03760 IPR012188 NAD(P)-dependent malic enzyme CDA09_03760 IPR036291 NAD(P)-binding domain superfamily CDA09_03760 IPR042112 Phosphate acetyltransferase, domain 2 CDA09_03760 IPR002505 Phosphate acetyl/butaryl transferase CDA09_03760 IPR012301 Malic enzyme, N-terminal domain CDA09_03760 IPR042113 Phosphate acetyltransferase, domain 1 CDA09_03760 IPR037062 Malic enzyme, N-terminal domain superfamily CDA09_03770 IPR013154 Alcohol dehydrogenase, N-terminal CDA09_03770 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CDA09_03770 IPR020843 Polyketide synthase, enoylreductase domain CDA09_03770 IPR036291 NAD(P)-binding domain superfamily CDA09_03770 IPR013149 Alcohol dehydrogenase, C-terminal CDA09_03770 IPR011032 GroES-like superfamily CDA09_03780 IPR029460 DNA polymerase, helix-hairpin-helix motif CDA09_03780 IPR040982 DNA polymerase III alpha subunit finger domain CDA09_03780 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CDA09_03780 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CDA09_03780 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CDA09_03780 IPR004013 PHP domain CDA09_03780 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDA09_03780 IPR016195 Polymerase/histidinol phosphatase-like CDA09_03780 IPR004805 DNA polymerase III, alpha subunit CDA09_03785 IPR019479 Peroxiredoxin, C-terminal CDA09_03785 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDA09_03785 IPR024706 Peroxiredoxin, AhpC-type CDA09_03785 IPR036249 Thioredoxin-like superfamily CDA09_03785 IPR013766 Thioredoxin domain CDA09_03790 IPR036046 Acylphosphatase-like domain superfamily CDA09_03790 IPR001792 Acylphosphatase-like domain CDA09_03790 IPR020456 Acylphosphatase CDA09_03790 IPR017968 Acylphosphatase, conserved site CDA09_03795 IPR001902 SLC26A/SulP transporter CDA09_03795 IPR011547 SLC26A/SulP transporter domain CDA09_03795 IPR036513 STAS domain superfamily CDA09_03795 IPR002645 STAS domain CDA09_03800 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal CDA09_03800 IPR014758 Methionyl-tRNA synthetase CDA09_03800 IPR023458 Methionine-tRNA ligase, type 1 CDA09_03800 IPR029038 Methionyl-tRNA synthetase, Zn-domain CDA09_03800 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDA09_03800 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain CDA09_03800 IPR033911 Methioninyl-tRNA synthetase core domain CDA09_03800 IPR015413 Methionyl/Leucyl tRNA synthetase CDA09_03800 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CDA09_03800 IPR002547 tRNA-binding domain CDA09_03800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_03800 IPR012340 Nucleic acid-binding, OB-fold CDA09_03805 IPR008722 Outer membrane porin F, N-terminal CDA09_03805 IPR036737 OmpA-like domain superfamily CDA09_03805 IPR006664 Outer membrane protein, bacterial CDA09_03805 IPR006690 Outer membrane protein, OmpA-like, conserved site CDA09_03805 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDA09_03805 IPR006665 OmpA-like domain CDA09_03810 IPR019591 Mrp/NBP35 ATP-binding protein CDA09_03810 IPR000808 Mrp, conserved site CDA09_03810 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CDA09_03810 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03815 IPR036157 dUTPase-like superfamily CDA09_03815 IPR033704 dUTPase, trimeric CDA09_03815 IPR029054 dUTPase-like CDA09_03815 IPR011962 dCTP deaminase CDA09_03820 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_03820 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CDA09_03820 IPR000310 Orn/Lys/Arg decarboxylase, major domain CDA09_03820 IPR011193 Ornithine/lysine/arginine decarboxylase CDA09_03820 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_03820 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_03820 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CDA09_03820 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal CDA09_03825 IPR012259 Dihydrofolate reductase CDA09_03825 IPR001796 Dihydrofolate reductase domain CDA09_03825 IPR024072 Dihydrofolate reductase-like domain superfamily CDA09_03825 IPR017925 Dihydrofolate reductase conserved site CDA09_03830 IPR000398 Thymidylate synthase CDA09_03830 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CDA09_03830 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily CDA09_03830 IPR020940 Thymidylate synthase, active site CDA09_03865 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_03865 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CDA09_03865 IPR002938 FAD-binding domain CDA09_03865 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CDA09_03870 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CDA09_03870 IPR017937 Thioredoxin, conserved site CDA09_03870 IPR033954 Disulphide bond isomerase, DsbC/G CDA09_03870 IPR012336 Thioredoxin-like fold CDA09_03870 IPR036249 Thioredoxin-like superfamily CDA09_03875 IPR036908 RlpA-like domain superfamily CDA09_03875 IPR005300 Lytic transglycosylase MltA, domain B CDA09_03875 IPR010611 3D domain CDA09_03875 IPR026044 Membrane-bound lytic murein transglycosylase A CDA09_03875 IPR034654 MltA, 3D domain CDA09_03885 IPR003561 Mutator MutT CDA09_03885 IPR020084 NUDIX hydrolase, conserved site CDA09_03885 IPR000086 NUDIX hydrolase domain CDA09_03885 IPR015797 NUDIX hydrolase-like domain superfamily CDA09_03885 IPR020476 NUDIX hydrolase CDA09_03890 IPR005584 DNA gyrase inhibitor YacG CDA09_03890 IPR013088 Zinc finger, NHR/GATA-type CDA09_03895 IPR027462 Z ring-associated protein D, C-terminal CDA09_03895 IPR036268 ZapD domain superfamily CDA09_03895 IPR009777 Cell division protein ZapD CDA09_03900 IPR001977 Dephospho-CoA kinase CDA09_03900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03910 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_03910 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_03910 IPR006316 Tryptophan synthase, beta chain-like CDA09_03910 IPR006653 Tryptophan synthase, beta chain, conserved site CDA09_03910 IPR006654 Tryptophan synthase, beta chain CDA09_03910 IPR023026 Tryptophan synthase beta chain/beta chain-like CDA09_03915 IPR004619 Type III pantothenate kinase CDA09_03920 IPR008988 Transcriptional repressor, C-terminal CDA09_03920 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CDA09_03920 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_03920 IPR036390 Winged helix DNA-binding domain superfamily CDA09_03920 IPR003142 Biotin protein ligase, C-terminal CDA09_03920 IPR004409 Biotin operon repressor, helix-turn-helix domain CDA09_03920 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CDA09_03920 IPR030855 Bifunctional ligase/repressor BirA CDA09_03920 IPR013196 Helix-turn-helix, type 11 CDA09_03925 IPR025944 Sigma-54 interaction domain, conserved site CDA09_03925 IPR010114 DNA-binding transcriptional regulator NtrC CDA09_03925 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_03925 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_03925 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_03925 IPR001789 Signal transduction response regulator, receiver domain CDA09_03925 IPR002197 DNA binding HTH domain, Fis-type CDA09_03925 IPR009057 Homeobox-like domain superfamily CDA09_03925 IPR011006 CheY-like superfamily CDA09_03925 IPR003593 AAA+ ATPase domain CDA09_03925 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_03930 IPR035965 PAS domain superfamily CDA09_03930 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_03930 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_03930 IPR005467 Histidine kinase domain CDA09_03930 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_03930 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_03930 IPR013767 PAS fold CDA09_03930 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_03930 IPR000014 PAS domain CDA09_03945 IPR002524 Cation efflux protein CDA09_03945 IPR027470 Cation efflux protein, cytoplasmic domain CDA09_03945 IPR023783 Cation efflux pump FieF CDA09_03945 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CDA09_03945 IPR027469 Cation efflux transmembrane domain superfamily CDA09_03950 IPR001763 Rhodanese-like domain CDA09_03950 IPR036873 Rhodanese-like domain superfamily CDA09_03955 IPR023515 Quinolinate synthase A, type 3 CDA09_03955 IPR003473 Quinolinate synthetase A CDA09_03955 IPR036094 Quinolinate synthetase A superfamily CDA09_03960 IPR005135 Endonuclease/exonuclease/phosphatase CDA09_03960 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDA09_03965 IPR030872 Cardiolipin synthase B CDA09_03965 IPR025202 Phospholipase D-like domain CDA09_03965 IPR001736 Phospholipase D/Transphosphatidylase CDA09_03975 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_03975 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_03975 IPR036291 NAD(P)-binding domain superfamily CDA09_03980 IPR022380 Glutamyl-Q tRNA(Asp) synthetase CDA09_03980 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CDA09_03980 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CDA09_03980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_03990 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_03990 IPR001173 Glycosyltransferase 2-like CDA09_04005 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CDA09_04005 IPR006225 Pseudouridine synthase, RluC/RluD CDA09_04005 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDA09_04005 IPR006145 Pseudouridine synthase, RsuA/RluA CDA09_04010 IPR041706 YchF, N-terminal CDA09_04010 IPR023192 TGS-like domain superfamily CDA09_04010 IPR013029 YchF, C-terminal domain CDA09_04010 IPR012675 Beta-grasp domain superfamily CDA09_04010 IPR012676 TGS-like CDA09_04010 IPR004095 TGS CDA09_04010 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CDA09_04010 IPR006073 GTP binding domain CDA09_04010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04010 IPR031167 OBG-type guanine nucleotide-binding (G) domain CDA09_04015 IPR036416 Peptidyl-tRNA hydrolase superfamily CDA09_04015 IPR018171 Peptidyl-tRNA hydrolase, conserved site CDA09_04015 IPR001328 Peptidyl-tRNA hydrolase CDA09_04020 IPR020055 Ribosomal protein L25, short-form CDA09_04020 IPR001021 Ribosomal protein L25, long-form CDA09_04020 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CDA09_04020 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CDA09_04020 IPR020057 Ribosomal protein L25, beta domain CDA09_04020 IPR037121 Ribosomal protein L25, C-terminal CDA09_04020 IPR029751 Ribosomal protein L25 CDA09_04025 IPR029057 Phosphoribosyltransferase-like CDA09_04025 IPR000836 Phosphoribosyltransferase domain CDA09_04025 IPR005946 Ribose-phosphate pyrophosphokinase CDA09_04025 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CDA09_04025 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CDA09_04025 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CDA09_04035 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CDA09_04035 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_04035 IPR036554 GHMP kinase, C-terminal domain superfamily CDA09_04035 IPR013750 GHMP kinase, C-terminal domain CDA09_04035 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_04035 IPR006204 GHMP kinase N-terminal domain CDA09_04040 IPR004565 Outer membrane lipoprotein LolB CDA09_04040 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDA09_04045 IPR013026 Tetratricopeptide repeat-containing domain CDA09_04045 IPR011990 Tetratricopeptide-like helical domain superfamily CDA09_04045 IPR019734 Tetratricopeptide repeat CDA09_04050 IPR010979 Ribosomal protein S13-like, H2TH CDA09_04050 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CDA09_04050 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CDA09_04050 IPR020629 Formamidopyrimidine-DNA glycosylase CDA09_04050 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain CDA09_04050 IPR035937 MutM-like, N-terminal CDA09_04050 IPR010663 Zinc finger, FPG/IleRS-type CDA09_04050 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type CDA09_04055 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04055 IPR027094 Mitofusin family CDA09_04055 IPR022812 Dynamin superfamily CDA09_04055 IPR030381 Dynamin-type guanine nucleotide-binding (G) domain CDA09_04060 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_04060 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_04065 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_04065 IPR001980 Phosphopantetheine adenylyltransferase CDA09_04065 IPR004821 Cytidyltransferase-like domain CDA09_04070 IPR004398 RNA methyltransferase, RsmD CDA09_04070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_04070 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDA09_04080 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CDA09_04080 IPR011765 Peptidase M16, N-terminal CDA09_04080 IPR001431 Peptidase M16, zinc-binding site CDA09_04080 IPR007863 Peptidase M16, C-terminal CDA09_04085 IPR013822 Signal recognition particle SRP54, helical bundle CDA09_04085 IPR004390 Signal-recognition particle receptor FtsY CDA09_04085 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CDA09_04085 IPR003593 AAA+ ATPase domain CDA09_04085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04085 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CDA09_04085 IPR036225 SRP/SRP receptor, N-terminal CDA09_04090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04090 IPR003593 AAA+ ATPase domain CDA09_04090 IPR003439 ABC transporter-like CDA09_04090 IPR005286 Cell division protein FtsE, ATP-binding CDA09_04090 IPR017871 ABC transporter, conserved site CDA09_04095 IPR004513 Cell division protein FtsX CDA09_04095 IPR040690 FtsX, extracellular domain CDA09_04105 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_04105 IPR005467 Histidine kinase domain CDA09_04105 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_04105 IPR011006 CheY-like superfamily CDA09_04105 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_04105 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_04105 IPR000014 PAS domain CDA09_04105 IPR001610 PAC motif CDA09_04105 IPR000700 PAS-associated, C-terminal CDA09_04105 IPR035965 PAS domain superfamily CDA09_04105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_04105 IPR001789 Signal transduction response regulator, receiver domain CDA09_04115 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CDA09_04115 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CDA09_04115 IPR029069 HotDog domain superfamily CDA09_04115 IPR006683 Thioesterase domain CDA09_04120 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CDA09_04120 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CDA09_04120 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CDA09_04120 IPR006422 D-erythrose-4-phosphate dehydrogenase CDA09_04120 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CDA09_04120 IPR036291 NAD(P)-binding domain superfamily CDA09_04145 IPR005839 Methylthiotransferase CDA09_04145 IPR013848 Methylthiotransferase, N-terminal CDA09_04145 IPR002792 TRAM domain CDA09_04145 IPR038135 Methylthiotransferase, N-terminal domain superfamily CDA09_04145 IPR006638 Elp3/MiaB/NifB CDA09_04145 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB CDA09_04145 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_04145 IPR007197 Radical SAM CDA09_04145 IPR020612 Methylthiotransferase, conserved site CDA09_04150 IPR003714 PhoH-like protein CDA09_04150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04155 IPR020549 Endoribonuclease YbeY, conserved site CDA09_04155 IPR023091 Metalloprotease catalytic domain superfamily, predicted CDA09_04155 IPR002036 Endoribonuclease YbeY CDA09_04160 IPR000644 CBS domain CDA09_04160 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_04160 IPR005170 Transporter-associated domain CDA09_04160 IPR036318 FAD-binding, type PCMH-like superfamily CDA09_04165 IPR004563 Apolipoprotein N-acyltransferase CDA09_04165 IPR003010 Carbon-nitrogen hydrolase CDA09_04165 IPR036526 Carbon-nitrogen hydrolase superfamily CDA09_04170 IPR006194 Glycine-tRNA synthetase, heterodimeric CDA09_04170 IPR002310 Glycine-tRNA ligase, alpha subunit CDA09_04175 IPR008909 DALR anticodon binding CDA09_04175 IPR015944 Glycine-tRNA ligase, beta subunit CDA09_04175 IPR006194 Glycine-tRNA synthetase, heterodimeric CDA09_04180 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CDA09_04180 IPR036412 HAD-like superfamily CDA09_04180 IPR023214 HAD superfamily CDA09_04180 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase CDA09_04180 IPR006543 Histidinol-phosphate phosphatase CDA09_04185 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CDA09_04185 IPR002123 Phospholipid/glycerol acyltransferase CDA09_04195 IPR006321 Pilus retraction protein PilT CDA09_04195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04195 IPR003593 AAA+ ATPase domain CDA09_04195 IPR001482 Type II/IV secretion system protein CDA09_04205 IPR029045 ClpP/crotonase-like domain superfamily CDA09_04205 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_04205 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_04205 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_04220 IPR000644 CBS domain CDA09_04220 IPR035474 KpsF-like, SIS domain CDA09_04220 IPR001347 Sugar isomerase (SIS) CDA09_04220 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CDA09_04225 IPR036291 NAD(P)-binding domain superfamily CDA09_04225 IPR006153 Cation/H+ exchanger CDA09_04225 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CDA09_04225 IPR003148 Regulator of K+ conductance, N-terminal CDA09_04225 IPR006037 Regulator of K+ conductance, C-terminal CDA09_04225 IPR038770 Sodium/solute symporter superfamily CDA09_04230 IPR017871 ABC transporter, conserved site CDA09_04230 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04230 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl CDA09_04230 IPR003439 ABC transporter-like CDA09_04230 IPR003593 AAA+ ATPase domain CDA09_04235 IPR030802 ABC transporter permease MalE CDA09_04235 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CDA09_04240 IPR003399 Mce/MlaD CDA09_04240 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD CDA09_04245 IPR007428 MlaA lipoprotein CDA09_04260 IPR003593 AAA+ ATPase domain CDA09_04260 IPR003439 ABC transporter-like CDA09_04260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04260 IPR017871 ABC transporter, conserved site CDA09_04265 IPR013525 ABC-2 type transporter CDA09_04265 IPR000412 ABC-2 transporter CDA09_04275 IPR001986 Enolpyruvate transferase domain CDA09_04275 IPR036968 Enolpyruvate transferase domain superfamily CDA09_04275 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CDA09_04275 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CDA09_04280 IPR028625 Regulator of nucleoside diphosphate kinase CDA09_04280 IPR023459 Transcription elongation factor GreA/GreB family CDA09_04280 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CDA09_04280 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CDA09_04280 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CDA09_04285 IPR018198 ATP phosphoribosyltransferase, conserved site CDA09_04285 IPR013820 ATP phosphoribosyltransferase, catalytic domain CDA09_04285 IPR001348 ATP phosphoribosyltransferase HisG CDA09_04285 IPR024893 ATP phosphoribosyltransferase HisG, short form CDA09_04290 IPR022695 Histidinol dehydrogenase, monofunctional CDA09_04290 IPR012131 Histidinol dehydrogenase CDA09_04290 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_04290 IPR001692 Histidinol dehydrogenase, conserved site CDA09_04295 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CDA09_04295 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_04295 IPR005861 Histidinol-phosphate aminotransferase family CDA09_04295 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_04295 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_04295 IPR004839 Aminotransferase, class I/classII CDA09_04300 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_04300 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CDA09_04300 IPR000807 Imidazoleglycerol-phosphate dehydratase CDA09_04300 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily CDA09_04305 IPR010139 Imidazole glycerol phosphate synthase, subunit H CDA09_04305 IPR029062 Class I glutamine amidotransferase-like CDA09_04305 IPR017926 Glutamine amidotransferase CDA09_04310 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CDA09_04310 IPR013785 Aldolase-type TIM barrel CDA09_04310 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CDA09_04310 IPR006062 Histidine biosynthesis CDA09_04310 IPR011060 Ribulose-phosphate binding barrel CDA09_04315 IPR006062 Histidine biosynthesis CDA09_04315 IPR004651 Histidine biosynthesis, HisF CDA09_04315 IPR011060 Ribulose-phosphate binding barrel CDA09_04315 IPR013785 Aldolase-type TIM barrel CDA09_04320 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CDA09_04320 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily CDA09_04320 IPR026660 Phosphoribosyl-AMP cyclohydrolase CDA09_04325 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CDA09_04325 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CDA09_04330 IPR019808 Histidine triad, conserved site CDA09_04330 IPR001310 Histidine triad (HIT) protein CDA09_04330 IPR011146 HIT-like domain CDA09_04330 IPR036265 HIT-like superfamily CDA09_04335 IPR006312 Sec-independent protein translocase protein TatA/E CDA09_04335 IPR003369 Sec-independent protein translocase protein TatA/B/E CDA09_04340 IPR018448 Twin-arginine translocation protein TatB CDA09_04340 IPR003369 Sec-independent protein translocase protein TatA/B/E CDA09_04345 IPR002033 Sec-independent periplasmic protein translocase TatC CDA09_04345 IPR019820 Sec-independent periplasmic protein translocase, conserved site CDA09_04350 IPR001478 PDZ domain CDA09_04350 IPR001940 Peptidase S1C CDA09_04350 IPR009003 Peptidase S1, PA clan CDA09_04350 IPR011782 Peptidase S1C, Do CDA09_04350 IPR036034 PDZ superfamily CDA09_04350 IPR041489 PDZ domain 6 CDA09_04355 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CDA09_04355 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CDA09_04370 IPR016102 Succinyl-CoA synthetase-like CDA09_04370 IPR011761 ATP-grasp fold CDA09_04370 IPR005809 Succinate--CoA synthetase, beta subunit CDA09_04370 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CDA09_04370 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CDA09_04370 IPR013815 ATP-grasp fold, subdomain 1 CDA09_04370 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CDA09_04375 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CDA09_04375 IPR003781 CoA-binding CDA09_04375 IPR016102 Succinyl-CoA synthetase-like CDA09_04375 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CDA09_04375 IPR036291 NAD(P)-binding domain superfamily CDA09_04375 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CDA09_04375 IPR005810 Succinyl-CoA ligase, alpha subunit CDA09_04380 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_04380 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_04380 IPR003660 HAMP domain CDA09_04380 IPR011006 CheY-like superfamily CDA09_04380 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_04380 IPR019247 Histidine kinase BarA, N-terminal CDA09_04380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_04380 IPR005467 Histidine kinase domain CDA09_04380 IPR036641 HPT domain superfamily CDA09_04380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_04380 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDA09_04380 IPR001789 Signal transduction response regulator, receiver domain CDA09_04385 IPR013740 Redoxin CDA09_04385 IPR017937 Thioredoxin, conserved site CDA09_04385 IPR013766 Thioredoxin domain CDA09_04385 IPR036249 Thioredoxin-like superfamily CDA09_04395 IPR001204 Phosphate transporter CDA09_04400 IPR036850 Nucleoside diphosphate kinase-like domain superfamily CDA09_04400 IPR001564 Nucleoside diphosphate kinase CDA09_04400 IPR023005 Nucleoside diphosphate kinase, active site CDA09_04400 IPR034907 Nucleoside diphosphate kinase-like domain CDA09_04405 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CDA09_04405 IPR007197 Radical SAM CDA09_04405 IPR013785 Aldolase-type TIM barrel CDA09_04405 IPR040072 Methyltransferase (Class A) CDA09_04405 IPR027492 Dual-specificity RNA methyltransferase RlmN CDA09_04415 IPR025194 Domain of unknown function DUF4115 CDA09_04415 IPR001387 Cro/C1-type helix-turn-helix domain CDA09_04415 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CDA09_04415 IPR023690 Cytoskeleton protein RodZ CDA09_04420 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CDA09_04420 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CDA09_04420 IPR011005 Dihydropteroate synthase-like CDA09_04425 IPR006195 Aminoacyl-tRNA synthetase, class II CDA09_04425 IPR036621 Anticodon-binding domain superfamily CDA09_04425 IPR033656 Histidyl-anticodon-binding CDA09_04425 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CDA09_04425 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CDA09_04425 IPR015807 Histidine-tRNA ligase CDA09_04425 IPR004154 Anticodon-binding CDA09_04430 IPR011990 Tetratricopeptide-like helical domain superfamily CDA09_04430 IPR018704 Tetratricopeptide repeat-like domain CDA09_04430 IPR026039 Uncharacterised protein family UPF0070 CDA09_04435 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDA09_04435 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CDA09_04435 IPR002372 Pyrrolo-quinoline quinone repeat CDA09_04435 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04435 IPR017687 Outer membrane protein assembly factor BamB CDA09_04440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04440 IPR015946 K homology domain-like, alpha/beta CDA09_04440 IPR032859 GTPase Der, C-terminal KH-domain-like CDA09_04440 IPR006073 GTP binding domain CDA09_04440 IPR016484 GTP-binding protein EngA CDA09_04440 IPR031166 EngA-type guanine nucleotide-binding (G) domain CDA09_04440 IPR005225 Small GTP-binding protein domain CDA09_04445 IPR005001 RNA-binding protein Hfq CDA09_04445 IPR010920 LSM domain superfamily CDA09_04450 IPR042108 GTPase HflX, N-terminal domain superfamily CDA09_04450 IPR025121 GTPase HflX, N-terminal CDA09_04450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04450 IPR006073 GTP binding domain CDA09_04450 IPR032305 GTP-binding protein, middle domain CDA09_04450 IPR030394 HflX-type guanine nucleotide-binding (G) domain CDA09_04450 IPR035647 EF-G domain III/V-like CDA09_04450 IPR016496 GTPase HflX CDA09_04455 IPR001107 Band 7 domain CDA09_04455 IPR036013 Band 7/SPFH domain superfamily CDA09_04455 IPR010201 HflK CDA09_04455 IPR020980 Menbrane protein HflK, N-terminal CDA09_04455 IPR001972 Stomatin family CDA09_04460 IPR001107 Band 7 domain CDA09_04460 IPR036013 Band 7/SPFH domain superfamily CDA09_04460 IPR010200 HflC CDA09_04470 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CDA09_04470 IPR004517 ATP phosphoribosyltransferase regulatory subunit CDA09_04470 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CDA09_04475 IPR042111 Adenylosuccinate synthetase, domain 3 CDA09_04475 IPR042110 Adenylosuccinate synthetase, domain 2 CDA09_04475 IPR001114 Adenylosuccinate synthetase CDA09_04475 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04475 IPR033128 Adenylosuccinate synthase, active site CDA09_04475 IPR042109 Adenylosuccinate synthetase, domain 1 CDA09_04475 IPR018220 Adenylosuccinate synthase, GTP-binding site CDA09_04490 IPR013223 Ribonuclease B, N-terminal OB domain CDA09_04490 IPR012340 Nucleic acid-binding, OB-fold CDA09_04490 IPR001900 Ribonuclease II/R CDA09_04490 IPR022966 Ribonuclease II/R, conserved site CDA09_04490 IPR040476 RNase II/RNase R, cold shock domain CDA09_04490 IPR003029 S1 domain CDA09_04490 IPR022967 RNA-binding domain, S1 CDA09_04490 IPR013668 Ribonuclease R winged-helix domain CDA09_04490 IPR011129 Cold shock domain CDA09_04490 IPR011805 Ribonuclease R CDA09_04490 IPR004476 Ribonuclease II/ribonuclease R CDA09_04495 IPR029028 Alpha/beta knot methyltransferases CDA09_04495 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_04495 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CDA09_04495 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CDA09_04495 IPR001537 tRNA/rRNA methyltransferase, SpoU type CDA09_04495 IPR004441 RNA methyltransferase TrmH family CDA09_04495 IPR029064 50S ribosomal protein L30e-like CDA09_04500 IPR005561 ANTAR domain CDA09_04500 IPR010910 Nitrate/nitrite sensing protein, bacterial CDA09_04500 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_04500 IPR013587 Nitrate/nitrite sensing protein CDA09_04500 IPR011006 CheY-like superfamily CDA09_04510 IPR008792 Coenzyme PQQ synthesis protein D CDA09_04510 IPR022479 Coenzyme PQQ synthesis D, bacteria CDA09_04510 IPR041881 Coenzyme PQQ synthesis protein D superfamily CDA09_04515 IPR006638 Elp3/MiaB/NifB CDA09_04515 IPR007197 Radical SAM CDA09_04515 IPR017200 Coenzyme PQQ synthesis protein E CDA09_04515 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria CDA09_04515 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CDA09_04515 IPR013785 Aldolase-type TIM barrel CDA09_04515 IPR023885 4Fe4S-binding SPASM domain CDA09_04525 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CDA09_04525 IPR022278 Phosphoserine aminotransferase CDA09_04525 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_04525 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_04525 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_04525 IPR000192 Aminotransferase class V domain CDA09_04530 IPR001295 Dihydroorotate dehydrogenase, conserved site CDA09_04530 IPR005719 Dihydroorotate dehydrogenase, class 2 CDA09_04530 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CDA09_04530 IPR005720 Dihydroorotate dehydrogenase domain CDA09_04530 IPR013785 Aldolase-type TIM barrel CDA09_04535 IPR006311 Twin-arginine translocation pathway, signal sequence CDA09_04540 IPR005889 Nitrate transport permease CDA09_04540 IPR035906 MetI-like superfamily CDA09_04540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_04545 IPR003439 ABC transporter-like CDA09_04545 IPR017871 ABC transporter, conserved site CDA09_04545 IPR005890 Nitrate transport ATP-binding subunit C/D CDA09_04545 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04545 IPR003593 AAA+ ATPase domain CDA09_04550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_04550 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDA09_04550 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase CDA09_04550 IPR007848 Methyltransferase small domain CDA09_04555 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CDA09_04555 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CDA09_04555 IPR023753 FAD/NAD(P)-binding domain CDA09_04555 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_04555 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CDA09_04555 IPR017121 Nitrite reductase [NAD(P)H], large subunit CDA09_04555 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CDA09_04555 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CDA09_04555 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal CDA09_04555 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CDA09_04555 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB CDA09_04555 IPR007419 BFD-like [2Fe-2S]-binding domain CDA09_04560 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CDA09_04560 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDA09_04565 IPR004737 Nitrate transporter CDA09_04565 IPR036259 MFS transporter superfamily CDA09_04565 IPR020846 Major facilitator superfamily domain CDA09_04565 IPR011701 Major facilitator superfamily CDA09_04570 IPR000719 Protein kinase domain CDA09_04570 IPR011009 Protein kinase-like domain superfamily CDA09_04570 IPR008266 Tyrosine-protein kinase, active site CDA09_04575 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_04575 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CDA09_04575 IPR006657 Molybdopterin dinucleotide-binding domain CDA09_04575 IPR006656 Molybdopterin oxidoreductase CDA09_04575 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CDA09_04575 IPR007419 BFD-like [2Fe-2S]-binding domain CDA09_04575 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDA09_04575 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain CDA09_04580 IPR000700 PAS-associated, C-terminal CDA09_04580 IPR001610 PAC motif CDA09_04580 IPR029787 Nucleotide cyclase CDA09_04580 IPR000160 GGDEF domain CDA09_04580 IPR035965 PAS domain superfamily CDA09_04580 IPR013656 PAS fold-4 CDA09_04580 IPR013655 PAS fold-3 CDA09_04580 IPR035919 EAL domain superfamily CDA09_04580 IPR001633 EAL domain CDA09_04580 IPR000014 PAS domain CDA09_04585 IPR042099 AMP-dependent synthetase-like superfamily CDA09_04585 IPR020845 AMP-binding, conserved site CDA09_04585 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_04585 IPR000873 AMP-dependent synthetase/ligase CDA09_04600 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_04600 IPR001423 Lysophospholipase patatin, conserved site CDA09_04600 IPR002641 Patatin-like phospholipase domain CDA09_04605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_04605 IPR003333 Mycolic acid cyclopropane synthase CDA09_04610 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04610 IPR001270 ClpA/B family CDA09_04610 IPR012763 DNA polymerase III, subunit gamma/ tau CDA09_04610 IPR022754 DNA polymerase III, gamma subunit, domain III CDA09_04610 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV CDA09_04610 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CDA09_04610 IPR003593 AAA+ ATPase domain CDA09_04610 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily CDA09_04610 IPR021029 DNA polymerase III, tau subunit, domain V CDA09_04615 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDA09_04615 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CDA09_04620 IPR023627 Recombination protein RecR CDA09_04620 IPR023628 Recombination protein RecR, C4-type zinc finger CDA09_04620 IPR006171 TOPRIM domain CDA09_04620 IPR034137 RecR, TOPRIM domain CDA09_04620 IPR000093 DNA recombination protein RecR CDA09_04625 IPR014349 Rieske iron-sulphur protein CDA09_04625 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal CDA09_04625 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit CDA09_04625 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDA09_04625 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CDA09_04625 IPR005805 Rieske iron-sulphur protein, C-terminal CDA09_04630 IPR016174 Di-haem cytochrome, transmembrane CDA09_04630 IPR030689 Cytochrome b CDA09_04630 IPR027387 Cytochrome b/b6-like domain superfamily CDA09_04630 IPR036150 Cytochrome b/b6, C-terminal domain superfamily CDA09_04630 IPR005798 Cytochrome b/b6, C-terminal CDA09_04630 IPR005797 Cytochrome b/b6, N-terminal CDA09_04635 IPR036909 Cytochrome c-like domain superfamily CDA09_04635 IPR002326 Cytochrome c1 CDA09_04635 IPR009056 Cytochrome c-like domain CDA09_04640 IPR036249 Thioredoxin-like superfamily CDA09_04640 IPR040079 Glutathione Transferase family CDA09_04640 IPR004046 Glutathione S-transferase, C-terminal CDA09_04640 IPR004045 Glutathione S-transferase, N-terminal CDA09_04640 IPR034341 Stringent starvation protein A, N-terminal CDA09_04640 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_04640 IPR010987 Glutathione S-transferase, C-terminal-like CDA09_04645 IPR007481 Stringent starvation protein B CDA09_04645 IPR036760 SspB-like superfamily CDA09_04650 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CDA09_04650 IPR001296 Glycosyl transferase, family 1 CDA09_04655 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_04655 IPR023080 D-amino acid dehydrogenase DadA CDA09_04655 IPR006076 FAD dependent oxidoreductase CDA09_04660 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal CDA09_04660 IPR028343 Fructose-1,6-bisphosphatase CDA09_04660 IPR000146 Fructose-1,6-bisphosphatase class 1 CDA09_04665 IPR019888 Transcription regulator AsnC-type CDA09_04665 IPR011008 Dimeric alpha-beta barrel CDA09_04665 IPR000485 AsnC-type HTH domain CDA09_04665 IPR011991 ArsR-like helix-turn-helix domain CDA09_04665 IPR036390 Winged helix DNA-binding domain superfamily CDA09_04665 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_04665 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDA09_04665 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDA09_04670 IPR024089 Proline dehydrogenase PutA, domain I/II CDA09_04670 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDA09_04670 IPR016160 Aldehyde dehydrogenase, cysteine active site CDA09_04670 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_04670 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_04670 IPR029041 FAD-linked oxidoreductase-like CDA09_04670 IPR013321 Arc-type ribbon-helix-helix CDA09_04670 IPR010985 Ribbon-helix-helix CDA09_04670 IPR024090 Proline dehydrogenase PutA, domain I CDA09_04670 IPR002872 Proline dehydrogenase domain CDA09_04670 IPR025703 Bifunctional protein PutA CDA09_04670 IPR024082 Proline dehydrogenase PutA, domain II CDA09_04670 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_04670 IPR015590 Aldehyde dehydrogenase domain CDA09_04670 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain CDA09_04670 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 CDA09_04685 IPR001633 EAL domain CDA09_04685 IPR000160 GGDEF domain CDA09_04685 IPR035919 EAL domain superfamily CDA09_04685 IPR005330 MHYT domain CDA09_04685 IPR029787 Nucleotide cyclase CDA09_04690 IPR006674 HD domain CDA09_04690 IPR006675 HDIG domain CDA09_04690 IPR003607 HD/PDEase domain CDA09_04690 IPR021812 Protein of unknown function DUF3391 CDA09_04690 IPR037522 HD-GYP domain CDA09_04695 IPR029787 Nucleotide cyclase CDA09_04695 IPR005330 MHYT domain CDA09_04695 IPR000160 GGDEF domain CDA09_04695 IPR035919 EAL domain superfamily CDA09_04695 IPR001633 EAL domain CDA09_04700 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_04700 IPR000796 Aspartate/other aminotransferase CDA09_04700 IPR004839 Aminotransferase, class I/classII CDA09_04700 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CDA09_04700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_04700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_04705 IPR004682 TRAP transporter solute receptor, DctP family CDA09_04705 IPR018389 TRAP transporter solute receptor DctP/TeaA CDA09_04705 IPR038404 TRAP transporter solute receptor DctP superfamily CDA09_04710 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDA09_04710 IPR004681 TRAP transporter large membrane protein DctM CDA09_04720 IPR036291 NAD(P)-binding domain superfamily CDA09_04720 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_04720 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_04740 IPR011711 GntR, C-terminal CDA09_04740 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_04740 IPR036390 Winged helix DNA-binding domain superfamily CDA09_04740 IPR000524 Transcription regulator HTH, GntR CDA09_04740 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_04745 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CDA09_04745 IPR039368 Acetolactate synthase large subunit, TPP binding domain CDA09_04745 IPR012846 Acetolactate synthase, large subunit, biosynthetic CDA09_04745 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDA09_04745 IPR029061 Thiamin diphosphate-binding fold CDA09_04745 IPR012000 Thiamine pyrophosphate enzyme, central domain CDA09_04745 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_04750 IPR042099 AMP-dependent synthetase-like superfamily CDA09_04750 IPR000873 AMP-dependent synthetase/ligase CDA09_04750 IPR020845 AMP-binding, conserved site CDA09_04750 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_04755 IPR004776 Membrane transport protein CDA09_04760 IPR005805 Rieske iron-sulphur protein, C-terminal CDA09_04760 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CDA09_04760 IPR014349 Rieske iron-sulphur protein CDA09_04760 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDA09_04765 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDA09_04765 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_04765 IPR002372 Pyrrolo-quinoline quinone repeat CDA09_04765 IPR009056 Cytochrome c-like domain CDA09_04765 IPR036909 Cytochrome c-like domain superfamily CDA09_04765 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family CDA09_04770 IPR015590 Aldehyde dehydrogenase domain CDA09_04770 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_04770 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_04770 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDA09_04770 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_04770 IPR016160 Aldehyde dehydrogenase, cysteine active site CDA09_04780 IPR036291 NAD(P)-binding domain superfamily CDA09_04780 IPR013149 Alcohol dehydrogenase, C-terminal CDA09_04780 IPR011032 GroES-like superfamily CDA09_04780 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CDA09_04780 IPR013154 Alcohol dehydrogenase, N-terminal CDA09_04780 IPR020843 Polyketide synthase, enoylreductase domain CDA09_04785 IPR001789 Signal transduction response regulator, receiver domain CDA09_04785 IPR011006 CheY-like superfamily CDA09_04785 IPR000792 Transcription regulator LuxR, C-terminal CDA09_04785 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_04800 IPR037124 GroES chaperonin superfamily CDA09_04800 IPR020818 GroES chaperonin family CDA09_04800 IPR018369 Chaperonin GroES, conserved site CDA09_04800 IPR011032 GroES-like superfamily CDA09_04805 IPR027413 GroEL-like equatorial domain superfamily CDA09_04805 IPR002423 Chaperonin Cpn60/TCP-1 family CDA09_04805 IPR001844 Chaperonin Cpn60 CDA09_04805 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDA09_04805 IPR027409 GroEL-like apical domain superfamily CDA09_04805 IPR018370 Chaperonin Cpn60, conserved site CDA09_04810 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_04810 IPR039420 Transcriptional regulatory protein WalR-like CDA09_04810 IPR011006 CheY-like superfamily CDA09_04810 IPR001789 Signal transduction response regulator, receiver domain CDA09_04810 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_04810 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_04815 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_04815 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_04815 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_04815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_04815 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_04815 IPR013727 Two-component sensor kinase, N-terminal CDA09_04815 IPR005467 Histidine kinase domain CDA09_04820 IPR007436 Protein of unknown function DUF485 CDA09_04825 IPR038377 Sodium/glucose symporter superfamily CDA09_04825 IPR001734 Sodium/solute symporter CDA09_04825 IPR014083 Cation/acetate symporter ActP CDA09_04825 IPR018212 Sodium/solute symporter, conserved site CDA09_04850 IPR008766 Replication gene A protein CDA09_04895 IPR001270 ClpA/B family CDA09_04895 IPR003593 AAA+ ATPase domain CDA09_04895 IPR002611 IstB-like ATP-binding protein CDA09_04895 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04895 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CDA09_04900 IPR001584 Integrase, catalytic core CDA09_04900 IPR017894 HTH domain, IS21 transposase-type CDA09_04905 IPR003346 Transposase, IS116/IS110/IS902 CDA09_04905 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CDA09_04915 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDA09_04915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_04915 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain CDA09_04915 IPR031157 Tr-type G domain, conserved site CDA09_04915 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_04915 IPR005225 Small GTP-binding protein domain CDA09_04915 IPR011779 Sulphate adenylyltransferase, large subunit CDA09_04915 IPR002891 Adenylyl-sulfate kinase CDA09_04915 IPR000795 Transcription factor, GTP-binding domain CDA09_04920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_04920 IPR002500 Phosphoadenosine phosphosulphate reductase CDA09_04920 IPR011784 Sulphate adenylyltransferase, small subunit CDA09_04925 IPR002781 Transmembrane protein TauE-like CDA09_04930 IPR036291 NAD(P)-binding domain superfamily CDA09_04930 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily CDA09_04930 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase CDA09_04930 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily CDA09_04930 IPR018214 Glutamyl-tRNA reductase, conserved site CDA09_04930 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain CDA09_04930 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CDA09_04930 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal CDA09_04935 IPR004373 Peptide chain release factor 1 CDA09_04935 IPR000352 Peptide chain release factor class I CDA09_04935 IPR005139 Peptide chain release factor CDA09_04940 IPR007848 Methyltransferase small domain CDA09_04940 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDA09_04940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_04940 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CDA09_04940 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CDA09_04940 IPR004556 Methyltransferase HemK-like CDA09_04945 IPR014434 Monothiol glutaredoxin CDA09_04945 IPR033658 Glutaredoxin, PICOT-like CDA09_04945 IPR004480 Monothiol glutaredoxin-related CDA09_04945 IPR002109 Glutaredoxin CDA09_04945 IPR036249 Thioredoxin-like superfamily CDA09_04950 IPR008271 Serine/threonine-protein kinase, active site CDA09_04950 IPR005543 PASTA domain CDA09_04950 IPR017441 Protein kinase, ATP binding site CDA09_04950 IPR000719 Protein kinase domain CDA09_04950 IPR011009 Protein kinase-like domain superfamily CDA09_04955 IPR008948 L-Aspartase-like CDA09_04955 IPR009049 Argininosuccinate lyase CDA09_04955 IPR029419 Argininosuccinate lyase, C-terminal CDA09_04955 IPR024083 Fumarase/histidase, N-terminal CDA09_04955 IPR022761 Fumarate lyase, N-terminal CDA09_04955 IPR020557 Fumarate lyase, conserved site CDA09_04955 IPR000362 Fumarate lyase family CDA09_04960 IPR001789 Signal transduction response regulator, receiver domain CDA09_04960 IPR007492 LytTR DNA-binding domain CDA09_04960 IPR011006 CheY-like superfamily CDA09_04965 IPR021135 Phosphoenolpyruvate carboxylase CDA09_04965 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type CDA09_04965 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site CDA09_04965 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDA09_04965 IPR033129 Phosphoenolpyruvate carboxylase, His active site CDA09_04970 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CDA09_04970 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily CDA09_04970 IPR022418 Porphobilinogen deaminase, C-terminal CDA09_04970 IPR022417 Porphobilinogen deaminase, N-terminal CDA09_04970 IPR000860 Porphobilinogen deaminase CDA09_04975 IPR039793 Uroporphyrinogen-III synthase CDA09_04975 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily CDA09_04975 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase CDA09_04980 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CDA09_04990 IPR018375 Coproporphyrinogen III oxidase, conserved site CDA09_04990 IPR001260 Coproporphyrinogen III oxidase, aerobic CDA09_04990 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily CDA09_04995 IPR011054 Rudiment single hybrid motif CDA09_04995 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CDA09_04995 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily CDA09_04995 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CDA09_04995 IPR000115 Phosphoribosylglycinamide synthetase CDA09_04995 IPR016185 Pre-ATP-grasp domain superfamily CDA09_04995 IPR013815 ATP-grasp fold, subdomain 1 CDA09_04995 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDA09_04995 IPR011761 ATP-grasp fold CDA09_05000 IPR036914 Methylglyoxal synthase-like domain superfamily CDA09_05000 IPR016193 Cytidine deaminase-like CDA09_05000 IPR024051 AICAR transformylase, duplicated domain superfamily CDA09_05000 IPR002695 Bifunctional purine biosynthesis protein PurH-like CDA09_05000 IPR011607 Methylglyoxal synthase-like domain CDA09_05005 IPR005412 DNA-binding protein Fis CDA09_05005 IPR002197 DNA binding HTH domain, Fis-type CDA09_05005 IPR009057 Homeobox-like domain superfamily CDA09_05010 IPR032887 tRNA-dihydrouridine synthase B CDA09_05010 IPR001269 tRNA-dihydrouridine synthase CDA09_05010 IPR018517 tRNA-dihydrouridine synthase, conserved site CDA09_05010 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CDA09_05010 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CDA09_05010 IPR035587 DUS-like, FMN-binding domain CDA09_05010 IPR013785 Aldolase-type TIM barrel CDA09_05015 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CDA09_05015 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CDA09_05015 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase CDA09_05015 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_05015 IPR002938 FAD-binding domain CDA09_05020 IPR007865 Aminopeptidase P, N-terminal CDA09_05020 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDA09_05020 IPR000994 Peptidase M24 CDA09_05020 IPR001714 Peptidase M24, methionine aminopeptidase CDA09_05020 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CDA09_05020 IPR036005 Creatinase/aminopeptidase-like CDA09_05025 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_05025 IPR005835 Nucleotidyl transferase domain CDA09_05030 IPR011009 Protein kinase-like domain superfamily CDA09_05030 IPR002575 Aminoglycoside phosphotransferase CDA09_05035 IPR005653 Organic solvent tolerance-like, N-terminal CDA09_05035 IPR007543 LptD, C-terminal CDA09_05035 IPR020889 LPS-assembly protein LptD CDA09_05040 IPR023034 Peptidyl-prolyl isomerase SurA CDA09_05040 IPR015391 SurA N-terminal CDA09_05040 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CDA09_05040 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CDA09_05040 IPR027304 Trigger factor/SurA domain superfamily CDA09_05045 IPR005255 PdxA family CDA09_05045 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase CDA09_05050 IPR023165 rRNA adenine dimethylase-like CDA09_05050 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CDA09_05050 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CDA09_05050 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CDA09_05050 IPR011530 Ribosomal RNA adenine dimethylase CDA09_05050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_05060 IPR000595 Cyclic nucleotide-binding domain CDA09_05060 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_05060 IPR018335 Transcription regulator HTH, Crp-type, conserved site CDA09_05060 IPR014710 RmlC-like jelly roll fold CDA09_05060 IPR012318 Crp-type HTH domain CDA09_05060 IPR036390 Winged helix DNA-binding domain superfamily CDA09_05060 IPR022299 Transcription regulator, NtcA CDA09_05060 IPR018490 Cyclic nucleotide-binding-like CDA09_05080 IPR005835 Nucleotidyl transferase domain CDA09_05080 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria CDA09_05080 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_05090 IPR001567 Peptidase M3A/M3B catalytic domain CDA09_05090 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CDA09_05100 IPR028923 SAICAR synthetase/ADE2, N-terminal CDA09_05100 IPR018236 SAICAR synthetase, conserved site CDA09_05100 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CDA09_05110 IPR006665 OmpA-like domain CDA09_05110 IPR036737 OmpA-like domain superfamily CDA09_05110 IPR006690 Outer membrane protein, OmpA-like, conserved site CDA09_05110 IPR039567 Glycine zipper domain CDA09_05110 IPR006664 Outer membrane protein, bacterial CDA09_05115 IPR001633 EAL domain CDA09_05115 IPR035919 EAL domain superfamily CDA09_05115 IPR000160 GGDEF domain CDA09_05115 IPR029787 Nucleotide cyclase CDA09_05115 IPR000014 PAS domain CDA09_05115 IPR035965 PAS domain superfamily CDA09_05115 IPR013656 PAS fold-4 CDA09_05125 IPR000160 GGDEF domain CDA09_05125 IPR011006 CheY-like superfamily CDA09_05125 IPR001789 Signal transduction response regulator, receiver domain CDA09_05125 IPR029787 Nucleotide cyclase CDA09_05130 IPR013785 Aldolase-type TIM barrel CDA09_05130 IPR000771 Fructose-bisphosphate aldolase, class-II CDA09_05130 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype CDA09_05135 IPR029479 Nitroreductase CDA09_05135 IPR000415 Nitroreductase-like CDA09_05135 IPR012825 5,6-dimethylbenzimidazole synthase BluB CDA09_05140 IPR015806 Pyruvate kinase, insert domain superfamily CDA09_05140 IPR036918 Pyruvate kinase, C-terminal domain superfamily CDA09_05140 IPR001697 Pyruvate kinase CDA09_05140 IPR015795 Pyruvate kinase, C-terminal CDA09_05140 IPR040442 Pyruvate kinase-like domain superfamily CDA09_05140 IPR011037 Pyruvate kinase-like, insert domain superfamily CDA09_05140 IPR018209 Pyruvate kinase, active site CDA09_05140 IPR015793 Pyruvate kinase, barrel CDA09_05140 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDA09_05155 IPR036043 Phosphoglycerate kinase superfamily CDA09_05155 IPR015824 Phosphoglycerate kinase, N-terminal CDA09_05155 IPR001576 Phosphoglycerate kinase CDA09_05155 IPR015911 Phosphoglycerate kinase, conserved site CDA09_05160 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CDA09_05160 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CDA09_05160 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CDA09_05160 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CDA09_05160 IPR036291 NAD(P)-binding domain superfamily CDA09_05160 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CDA09_05165 IPR033248 Transketolase, C-terminal domain CDA09_05165 IPR033247 Transketolase family CDA09_05165 IPR005474 Transketolase, N-terminal CDA09_05165 IPR020826 Transketolase binding site CDA09_05165 IPR029061 Thiamin diphosphate-binding fold CDA09_05165 IPR005478 Transketolase, bacterial-like CDA09_05165 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CDA09_05165 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_05170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05170 IPR006082 Phosphoribulokinase CDA09_05170 IPR006083 Phosphoribulokinase/uridine kinase CDA09_05175 IPR033942 Inositol monophosphatase CDA09_05175 IPR000760 Inositol monophosphatase-like CDA09_05175 IPR020550 Inositol monophosphatase, conserved site CDA09_05175 IPR020583 Inositol monophosphatase, metal-binding site CDA09_05175 IPR022337 Inositol monophosphatase, SuhB CDA09_05180 IPR029028 Alpha/beta knot methyltransferases CDA09_05180 IPR015947 PUA-like superfamily CDA09_05180 IPR006700 Ribosomal RNA small subunit methyltransferase E CDA09_05180 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_05185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05185 IPR022489 Polyphosphate:AMP phosphotransferase CDA09_05185 IPR022488 Polyphosphate kinase-2-related CDA09_05190 IPR036393 Acetylglutamate kinase-like superfamily CDA09_05190 IPR016181 Acyl-CoA N-acyltransferase CDA09_05190 IPR033719 N-acetylglutamate synthase, kinase-like domain CDA09_05190 IPR000182 GNAT domain CDA09_05190 IPR010167 Amino-acid N-acetyltransferase CDA09_05190 IPR001048 Aspartate/glutamate/uridylate kinase CDA09_05195 IPR001633 EAL domain CDA09_05195 IPR035919 EAL domain superfamily CDA09_05195 IPR000014 PAS domain CDA09_05195 IPR000160 GGDEF domain CDA09_05195 IPR029787 Nucleotide cyclase CDA09_05195 IPR005330 MHYT domain CDA09_05195 IPR035965 PAS domain superfamily CDA09_05200 IPR036766 Fe(II) trafficking protein YggX superfamily CDA09_05200 IPR007457 Fe(II) trafficking protein YggX CDA09_05205 IPR026022 PhoU domain CDA09_05205 IPR038078 PhoU-like domain superfamily CDA09_05205 IPR028366 Phosphate transport system protein PhoU CDA09_05210 IPR004788 Ribose 5-phosphate isomerase, type A CDA09_05210 IPR037171 NagB/RpiA transferase-like CDA09_05210 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CDA09_05215 IPR005111 MoeA, C-terminal, domain IV CDA09_05215 IPR036688 MoeA, C-terminal, domain IV superfamily CDA09_05215 IPR005110 MoeA, N-terminal and linker domain CDA09_05215 IPR001453 MoaB/Mog domain CDA09_05215 IPR038987 Molybdopterin biosynthesis protein MoeA-like CDA09_05215 IPR008284 Molybdenum cofactor biosynthesis, conserved site CDA09_05215 IPR036135 MoeA, N-terminal and linker domain superfamily CDA09_05215 IPR036425 MoaB/Mog-like domain superfamily CDA09_05220 IPR036909 Cytochrome c-like domain superfamily CDA09_05220 IPR008168 Cytochrome c, class IC CDA09_05220 IPR009056 Cytochrome c-like domain CDA09_05220 IPR024167 Cytochrome c4-like CDA09_05225 IPR006073 GTP binding domain CDA09_05225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05225 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CDA09_05225 IPR030393 EngB-type guanine nucleotide-binding (G) domain CDA09_05230 IPR001731 Delta-aminolevulinic acid dehydratase CDA09_05230 IPR030656 Delta-aminolevulinic acid dehydratase, active site CDA09_05230 IPR013785 Aldolase-type TIM barrel CDA09_05240 IPR013216 Methyltransferase type 11 CDA09_05240 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CDA09_05240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_05245 IPR006638 Elp3/MiaB/NifB CDA09_05245 IPR013785 Aldolase-type TIM barrel CDA09_05245 IPR024177 Biotin synthase CDA09_05245 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CDA09_05245 IPR010722 Biotin and thiamin synthesis-associated domain CDA09_05245 IPR007197 Radical SAM CDA09_05250 IPR029057 Phosphoribosyltransferase-like CDA09_05250 IPR000836 Phosphoribosyltransferase domain CDA09_05250 IPR005222 Competence protein ComF CDA09_05255 IPR029028 Alpha/beta knot methyltransferases CDA09_05255 IPR001537 tRNA/rRNA methyltransferase, SpoU type CDA09_05255 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CDA09_05255 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_05260 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_05260 IPR036291 NAD(P)-binding domain superfamily CDA09_05260 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CDA09_05260 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CDA09_05260 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CDA09_05260 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CDA09_05270 IPR003708 Bacterial protein export chaperone SecB CDA09_05270 IPR035958 SecB-like superfamily CDA09_05275 IPR002109 Glutaredoxin CDA09_05275 IPR011767 Glutaredoxin active site CDA09_05275 IPR036249 Thioredoxin-like superfamily CDA09_05275 IPR011900 Glutaredoxin, GrxC CDA09_05275 IPR014025 Glutaredoxin subgroup CDA09_05280 IPR036873 Rhodanese-like domain superfamily CDA09_05280 IPR001763 Rhodanese-like domain CDA09_05285 IPR036390 Winged helix DNA-binding domain superfamily CDA09_05285 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_05285 IPR001845 HTH ArsR-type DNA-binding domain CDA09_05285 IPR011991 ArsR-like helix-turn-helix domain CDA09_05290 IPR005952 Phosphoglycerate mutase 1 CDA09_05290 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CDA09_05290 IPR029033 Histidine phosphatase superfamily CDA09_05290 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_05295 IPR016047 Peptidase M23 CDA09_05295 IPR011055 Duplicated hybrid motif CDA09_05300 IPR004447 C-terminal-processing peptidase S41A CDA09_05300 IPR005151 Tail specific protease CDA09_05300 IPR001478 PDZ domain CDA09_05300 IPR029045 ClpP/crotonase-like domain superfamily CDA09_05300 IPR036034 PDZ superfamily CDA09_05305 IPR012730 Molybdopterin synthase sulfurylase MoeB CDA09_05305 IPR035985 Ubiquitin-activating enzyme CDA09_05305 IPR000594 THIF-type NAD/FAD binding fold CDA09_05310 IPR004794 Riboflavin biosynthesis protein RibD CDA09_05310 IPR016193 Cytidine deaminase-like CDA09_05310 IPR011549 Riboflavin-specific deaminase, C-terminal CDA09_05310 IPR002125 Cytidine and deoxycytidylate deaminase domain CDA09_05310 IPR016192 APOBEC/CMP deaminase, zinc-binding CDA09_05310 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CDA09_05310 IPR024072 Dihydrofolate reductase-like domain superfamily CDA09_05315 IPR005144 ATP-cone domain CDA09_05315 IPR003796 Ribonucleotide reductase regulator NrdR-like CDA09_05320 IPR039429 Serine hydroxymethyltransferase-like domain CDA09_05320 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_05320 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_05320 IPR001085 Serine hydroxymethyltransferase CDA09_05320 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_05320 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CDA09_05325 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CDA09_05325 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_05325 IPR029033 Histidine phosphatase superfamily CDA09_05330 IPR036059 Metalloprotease TldD/PmbA superfamily CDA09_05330 IPR002510 Metalloprotease TldD/PmbA CDA09_05330 IPR035068 Metalloprotease TldD/PmbA, N-terminal CDA09_05335 IPR023153 PSPTO4464-like domain superfamily CDA09_05335 IPR006839 Ribosome-associated, YjgA CDA09_05340 IPR008284 Molybdenum cofactor biosynthesis, conserved site CDA09_05340 IPR001453 MoaB/Mog domain CDA09_05340 IPR036425 MoaB/Mog-like domain superfamily CDA09_05345 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ CDA09_05345 IPR013130 Ferric reductase transmembrane component-like domain CDA09_05350 IPR000572 Oxidoreductase, molybdopterin-binding domain CDA09_05350 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDA09_05350 IPR006311 Twin-arginine translocation pathway, signal sequence CDA09_05350 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily CDA09_05350 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP CDA09_05360 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDA09_05360 IPR013325 RNA polymerase sigma factor, region 2 CDA09_05360 IPR039425 RNA polymerase sigma-70 like CDA09_05360 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_05360 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CDA09_05360 IPR014284 RNA polymerase sigma-70 like domain CDA09_05360 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_05360 IPR007627 RNA polymerase sigma-70 region 2 CDA09_05365 IPR006218 DAHP synthetase I/KDSA CDA09_05365 IPR006219 DHAP synthase, class 1 CDA09_05365 IPR013785 Aldolase-type TIM barrel CDA09_05370 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type CDA09_05370 IPR036451 Cobalamin adenosyltransferase-like superfamily CDA09_05370 IPR016030 Cobalamin adenosyltransferase-like CDA09_05375 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CDA09_05375 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_05375 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CDA09_05375 IPR003156 DHHA1 domain CDA09_05375 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CDA09_05375 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CDA09_05375 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CDA09_05375 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CDA09_05375 IPR002318 Alanine-tRNA ligase, class IIc CDA09_05385 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CDA09_05385 IPR005841 Alpha-D-phosphohexomutase superfamily CDA09_05385 IPR016066 Alpha-D-phosphohexomutase, conserved site CDA09_05385 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CDA09_05385 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CDA09_05385 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CDA09_05385 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CDA09_05385 IPR005843 Alpha-D-phosphohexomutase, C-terminal CDA09_05400 IPR018300 Aminotransferase, class IV, conserved site CDA09_05400 IPR036038 Aminotransferase-like, PLP-dependent enzymes CDA09_05400 IPR033939 Branched-chain aminotransferase CDA09_05400 IPR001544 Aminotransferase class IV CDA09_05400 IPR005785 Branched-chain amino acid aminotransferase I CDA09_05410 IPR015797 NUDIX hydrolase-like domain superfamily CDA09_05410 IPR020084 NUDIX hydrolase, conserved site CDA09_05410 IPR000086 NUDIX hydrolase domain CDA09_05410 IPR033713 Phosphatase NudJ CDA09_05410 IPR020476 NUDIX hydrolase CDA09_05420 IPR004506 tRNA-specific 2-thiouridylase CDA09_05420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_05420 IPR023382 Adenine nucleotide alpha hydrolase-like domains CDA09_05440 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme CDA09_05440 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CDA09_05440 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain CDA09_05450 IPR001110 Uncharacterised protein family UPF0012, conserved site CDA09_05450 IPR003010 Carbon-nitrogen hydrolase CDA09_05450 IPR036526 Carbon-nitrogen hydrolase superfamily CDA09_05455 IPR002510 Metalloprotease TldD/PmbA CDA09_05455 IPR035068 Metalloprotease TldD/PmbA, N-terminal CDA09_05455 IPR036059 Metalloprotease TldD/PmbA superfamily CDA09_05455 IPR025502 TldD CDA09_05465 IPR001789 Signal transduction response regulator, receiver domain CDA09_05465 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_05465 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_05465 IPR003593 AAA+ ATPase domain CDA09_05465 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_05465 IPR025944 Sigma-54 interaction domain, conserved site CDA09_05465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05465 IPR011006 CheY-like superfamily CDA09_05465 IPR009057 Homeobox-like domain superfamily CDA09_05475 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_05475 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_05475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_05475 IPR005467 Histidine kinase domain CDA09_05475 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_05475 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_05490 IPR000189 Prokaryotic transglycosylase, active site CDA09_05490 IPR008258 Transglycosylase SLT domain 1 CDA09_05490 IPR023664 Murein transglycosylase-C CDA09_05490 IPR023346 Lysozyme-like domain superfamily CDA09_05490 IPR024570 Murein transglycosylase-C, N-terminal CDA09_05495 IPR006195 Aminoacyl-tRNA synthetase, class II CDA09_05495 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CDA09_05495 IPR033730 Prokaryote proline-tRNA ligase core domain CDA09_05495 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CDA09_05495 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CDA09_05495 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CDA09_05495 IPR002316 Proline-tRNA ligase, class IIa CDA09_05495 IPR036621 Anticodon-binding domain superfamily CDA09_05495 IPR004154 Anticodon-binding CDA09_05495 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CDA09_05500 IPR015797 NUDIX hydrolase-like domain superfamily CDA09_05500 IPR020084 NUDIX hydrolase, conserved site CDA09_05500 IPR020476 NUDIX hydrolase CDA09_05500 IPR000086 NUDIX hydrolase domain CDA09_05500 IPR022927 RNA pyrophosphohydrolase RppH CDA09_05510 IPR012347 Ferritin-like CDA09_05510 IPR009040 Ferritin-like diiron domain CDA09_05510 IPR003251 Rubrerythrin CDA09_05510 IPR024934 Rubredoxin-like domain CDA09_05510 IPR009078 Ferritin-like superfamily CDA09_05515 IPR009051 Alpha-helical ferredoxin CDA09_05515 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit CDA09_05515 IPR004017 Cysteine-rich domain CDA09_05515 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_05515 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_05530 IPR011566 Ubiquinone biosynthesis protein Coq7 CDA09_05530 IPR012347 Ferritin-like CDA09_05530 IPR009078 Ferritin-like superfamily CDA09_05535 IPR003718 OsmC/Ohr family CDA09_05535 IPR036102 OsmC/Ohr superfamily CDA09_05535 IPR015946 K homology domain-like, alpha/beta CDA09_05540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_05540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_05540 IPR013441 Tyrosine phenol-lyase CDA09_05540 IPR018176 Tryptophanase, conserved site CDA09_05540 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_05540 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CDA09_05540 IPR011166 Beta-eliminating lyase family CDA09_05545 IPR005823 Ribosomal protein L13, bacterial-type CDA09_05545 IPR005822 Ribosomal protein L13 CDA09_05545 IPR036899 Ribosomal protein L13 superfamily CDA09_05550 IPR020574 Ribosomal protein S9, conserved site CDA09_05550 IPR000754 Ribosomal protein S9 CDA09_05550 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_05550 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_05550 IPR023035 Ribosomal protein S9, bacterial/plastid CDA09_05555 IPR036291 NAD(P)-binding domain superfamily CDA09_05555 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 CDA09_05555 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site CDA09_05555 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CDA09_05555 IPR000534 Semialdehyde dehydrogenase, NAD-binding CDA09_05560 IPR035903 HesB-like domain superfamily CDA09_05560 IPR023063 FeS cluster insertion protein ErpA CDA09_05560 IPR017870 FeS cluster insertion, C-terminal, conserved site CDA09_05560 IPR000361 FeS cluster biogenesis CDA09_05560 IPR016092 FeS cluster insertion protein CDA09_05565 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger CDA09_05565 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CDA09_05565 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CDA09_05570 IPR011055 Duplicated hybrid motif CDA09_05570 IPR016047 Peptidase M23 CDA09_05575 IPR024088 Tyrosine-tRNA ligase, bacterial-type CDA09_05575 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDA09_05575 IPR002305 Aminoacyl-tRNA synthetase, class Ic CDA09_05575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_05575 IPR002942 RNA-binding S4 domain CDA09_05575 IPR036986 RNA-binding S4 domain superfamily CDA09_05575 IPR002307 Tyrosine-tRNA ligase CDA09_05575 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 CDA09_05580 IPR029787 Nucleotide cyclase CDA09_05580 IPR005330 MHYT domain CDA09_05580 IPR000160 GGDEF domain CDA09_05580 IPR035919 EAL domain superfamily CDA09_05580 IPR001633 EAL domain CDA09_05625 IPR023401 Ornithine cyclodeaminase, N-terminal CDA09_05625 IPR003462 Ornithine cyclodeaminase/mu-crystallin CDA09_05625 IPR036291 NAD(P)-binding domain superfamily CDA09_05630 IPR036390 Winged helix DNA-binding domain superfamily CDA09_05630 IPR000847 Transcription regulator HTH, LysR CDA09_05630 IPR005119 LysR, substrate-binding CDA09_05630 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_05645 IPR018060 DNA binding HTH domain, AraC-type CDA09_05645 IPR009057 Homeobox-like domain superfamily CDA09_05645 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDA09_05650 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_05650 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_05650 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_05650 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_05650 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_05650 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_05650 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_05655 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CDA09_05655 IPR029045 ClpP/crotonase-like domain superfamily CDA09_05655 IPR034733 Acetyl-CoA carboxylase CDA09_05655 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CDA09_05660 IPR001882 Biotin-binding site CDA09_05660 IPR011054 Rudiment single hybrid motif CDA09_05660 IPR016185 Pre-ATP-grasp domain superfamily CDA09_05660 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDA09_05660 IPR011053 Single hybrid motif CDA09_05660 IPR005481 Biotin carboxylase-like, N-terminal domain CDA09_05660 IPR000089 Biotin/lipoyl attachment CDA09_05660 IPR005482 Biotin carboxylase, C-terminal CDA09_05660 IPR011764 Biotin carboxylation domain CDA09_05660 IPR011761 ATP-grasp fold CDA09_05665 IPR000873 AMP-dependent synthetase/ligase CDA09_05665 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_05665 IPR020845 AMP-binding, conserved site CDA09_05675 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_05675 IPR020845 AMP-binding, conserved site CDA09_05675 IPR000873 AMP-dependent synthetase/ligase CDA09_05675 IPR042099 AMP-dependent synthetase-like superfamily CDA09_05675 IPR005914 Acetoacetyl-CoA synthase CDA09_05680 IPR032466 Metal-dependent hydrolase CDA09_05680 IPR014311 Guanine deaminase CDA09_05680 IPR011059 Metal-dependent hydrolase, composite domain superfamily CDA09_05680 IPR006680 Amidohydrolase-related CDA09_05690 IPR000160 GGDEF domain CDA09_05690 IPR029787 Nucleotide cyclase CDA09_05690 IPR001789 Signal transduction response regulator, receiver domain CDA09_05690 IPR011006 CheY-like superfamily CDA09_05695 IPR023559 Flagellar transcriptional activator FlhD CDA09_05695 IPR036194 Flagellar transcriptional activator FlhD superfamily CDA09_05700 IPR007944 Flagellar transcriptional activator FlhC CDA09_05705 IPR022522 Flagellar motor stator, MotA CDA09_05705 IPR002898 MotA/TolQ/ExbB proton channel CDA09_05705 IPR000540 Flagellar motor protein MotA, conserved site CDA09_05710 IPR006665 OmpA-like domain CDA09_05710 IPR025713 Motility protein B, N-terminal domain CDA09_05710 IPR036737 OmpA-like domain superfamily CDA09_05715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_05715 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CDA09_05715 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily CDA09_05715 IPR000780 MCP methyltransferase, CheR-type CDA09_05715 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CDA09_05715 IPR026024 Chemotaxis protein methyltransferase CheR CDA09_05720 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type CDA09_05720 IPR035909 Methylesterase CheB, C-terminal CDA09_05720 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CDA09_05720 IPR001789 Signal transduction response regulator, receiver domain CDA09_05720 IPR011006 CheY-like superfamily CDA09_05725 IPR024181 Chemotaxis response regulator CheV CDA09_05725 IPR002545 CheW-like domain CDA09_05725 IPR011006 CheY-like superfamily CDA09_05725 IPR001789 Signal transduction response regulator, receiver domain CDA09_05725 IPR036061 CheW-like domain superfamily CDA09_05730 IPR036061 CheW-like domain superfamily CDA09_05730 IPR001789 Signal transduction response regulator, receiver domain CDA09_05730 IPR011006 CheY-like superfamily CDA09_05730 IPR002545 CheW-like domain CDA09_05730 IPR024181 Chemotaxis response regulator CheV CDA09_05735 IPR011006 CheY-like superfamily CDA09_05735 IPR001789 Signal transduction response regulator, receiver domain CDA09_05740 IPR007439 Chemotaxis phosphatase, CheZ CDA09_05745 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDA09_05745 IPR036641 HPT domain superfamily CDA09_05745 IPR005467 Histidine kinase domain CDA09_05745 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_05745 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_05745 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_05745 IPR015162 CheY binding CDA09_05745 IPR035891 CheY-binding domain of CheA CDA09_05745 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_05745 IPR004105 Histidine kinase CheA-like, homodimeric domain CDA09_05745 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CDA09_05745 IPR036061 CheW-like domain superfamily CDA09_05745 IPR002545 CheW-like domain CDA09_05750 IPR004732 Transaldolase type 2 CDA09_05750 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CDA09_05750 IPR013785 Aldolase-type TIM barrel CDA09_05750 IPR018225 Transaldolase, active site CDA09_05755 IPR006145 Pseudouridine synthase, RsuA/RluA CDA09_05755 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CDA09_05755 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDA09_05760 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CDA09_05760 IPR005859 Cysteine synthase CysK CDA09_05760 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_05760 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_05760 IPR005856 Cysteine synthase CDA09_05765 IPR036390 Winged helix DNA-binding domain superfamily CDA09_05765 IPR000847 Transcription regulator HTH, LysR CDA09_05765 IPR005119 LysR, substrate-binding CDA09_05765 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain CDA09_05765 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_05770 IPR005666 Sulphate transport system permease protein 1 CDA09_05770 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_05770 IPR017871 ABC transporter, conserved site CDA09_05770 IPR003439 ABC transporter-like CDA09_05770 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CDA09_05770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05770 IPR003593 AAA+ ATPase domain CDA09_05770 IPR024765 TOBE-like domain CDA09_05775 IPR005667 Sulphate ABC transporter permease protein 2 CDA09_05775 IPR035906 MetI-like superfamily CDA09_05775 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_05775 IPR011866 Sulphate ABC transporter, permease protein CysW CDA09_05780 IPR005667 Sulphate ABC transporter permease protein 2 CDA09_05780 IPR035906 MetI-like superfamily CDA09_05780 IPR011865 Sulphate ABC transporter, permease protein CysT CDA09_05780 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_05815 IPR017850 Alkaline-phosphatase-like, core domain superfamily CDA09_05815 IPR024607 Sulfatase, conserved site CDA09_05815 IPR000917 Sulfatase, N-terminal CDA09_05835 IPR003593 AAA+ ATPase domain CDA09_05835 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_05835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05835 IPR009057 Homeobox-like domain superfamily CDA09_05835 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_05835 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_05835 IPR025944 Sigma-54 interaction domain, conserved site CDA09_05835 IPR029995 Transcriptional activator SfnR/FlbD CDA09_05840 IPR004606 Molybdenum-pterin binding CDA09_05840 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_05840 IPR005116 Transport-associated OB, type 1 CDA09_05850 IPR017871 ABC transporter, conserved site CDA09_05850 IPR003439 ABC transporter-like CDA09_05850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05850 IPR003593 AAA+ ATPase domain CDA09_05850 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB CDA09_05855 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_05855 IPR005889 Nitrate transport permease CDA09_05855 IPR035906 MetI-like superfamily CDA09_05860 IPR035906 MetI-like superfamily CDA09_05860 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_05865 IPR015168 SsuA/THI5-like CDA09_05865 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_05865 IPR010067 Aliphatic sulfonates-binding protein CDA09_05875 IPR000917 Sulfatase, N-terminal CDA09_05875 IPR024607 Sulfatase, conserved site CDA09_05875 IPR017850 Alkaline-phosphatase-like, core domain superfamily CDA09_05885 IPR036259 MFS transporter superfamily CDA09_05885 IPR020846 Major facilitator superfamily domain CDA09_05885 IPR004638 Drug resistance transporter EmrB-like CDA09_05885 IPR011701 Major facilitator superfamily CDA09_05890 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDA09_05895 IPR042099 AMP-dependent synthetase-like superfamily CDA09_05895 IPR000873 AMP-dependent synthetase/ligase CDA09_05895 IPR020845 AMP-binding, conserved site CDA09_05895 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_05905 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_05905 IPR035906 MetI-like superfamily CDA09_05905 IPR005889 Nitrate transport permease CDA09_05910 IPR003439 ABC transporter-like CDA09_05910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05910 IPR003593 AAA+ ATPase domain CDA09_05925 IPR005669 Thiosulphate/Sulfate-binding protein CDA09_05925 IPR034408 Sulphate/thiosulphate-binding site CDA09_05925 IPR000957 Sulphate/thiosulphate-binding, conserved site CDA09_05930 IPR001189 Manganese/iron superoxide dismutase CDA09_05930 IPR019831 Manganese/iron superoxide dismutase, N-terminal CDA09_05930 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CDA09_05930 IPR019832 Manganese/iron superoxide dismutase, C-terminal CDA09_05930 IPR019833 Manganese/iron superoxide dismutase, binding site CDA09_05930 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CDA09_05935 IPR025824 OB-fold nucleic acid binding domain CDA09_05935 IPR003753 Exonuclease VII, large subunit CDA09_05935 IPR020579 Exonuclease VII, large subunit, C-terminal CDA09_05940 IPR002898 MotA/TolQ/ExbB proton channel CDA09_05945 IPR003400 Biopolymer transport protein ExbD/TolR CDA09_05950 IPR003758 Tetraacyldisaccharide 4'-kinase CDA09_05950 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05955 IPR005651 Trm112-like CDA09_05960 IPR003329 Acylneuraminate cytidylyltransferase CDA09_05960 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CDA09_05960 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_05965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_05965 IPR000850 Adenylate kinase/UMP-CMP kinase CDA09_05965 IPR006259 Adenylate kinase subfamily CDA09_05965 IPR033690 Adenylate kinase, conserved site CDA09_05965 IPR007862 Adenylate kinase, active site lid domain CDA09_05970 IPR022953 ATP-dependent 6-phosphofructokinase CDA09_05970 IPR035966 Phosphofructokinase superfamily CDA09_05970 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 CDA09_05970 IPR000023 Phosphofructokinase domain CDA09_05975 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_05975 IPR000101 Gamma-glutamyltranspeptidase CDA09_05985 IPR004268 Peptidoglycan biosynthesis protein MurJ CDA09_05990 IPR036510 Ribosomal protein S20 superfamily CDA09_05990 IPR002583 Ribosomal protein S20 CDA09_06000 IPR005814 Aminotransferase class-III CDA09_06000 IPR004636 Acetylornithine/Succinylornithine transaminase family CDA09_06000 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_06000 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_06000 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_06005 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CDA09_06005 IPR006130 Aspartate/ornithine carbamoyltransferase CDA09_06005 IPR002292 Ornithine/putrescine carbamoyltransferase CDA09_06005 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CDA09_06005 IPR024904 Ornithine carbamoyltransferase CDA09_06005 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CDA09_06010 IPR018223 Argininosuccinate synthase, conserved site CDA09_06010 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CDA09_06010 IPR001518 Argininosuccinate synthase CDA09_06010 IPR023434 Argininosuccinate synthase, type 1 subfamily CDA09_06010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_06020 IPR009664 Pyrimidine/purine nucleoside phosphorylase CDA09_06020 IPR014710 RmlC-like jelly roll fold CDA09_06020 IPR011051 RmlC-like cupin domain superfamily CDA09_06025 IPR036183 YajQ-like superfamily CDA09_06025 IPR035570 UPF0234, N-terminal CDA09_06025 IPR007551 Protein of unknown function DUF520 CDA09_06025 IPR035571 UPF0234-like, C-terminal CDA09_06030 IPR030802 ABC transporter permease MalE CDA09_06030 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CDA09_06035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06035 IPR003439 ABC transporter-like CDA09_06035 IPR003593 AAA+ ATPase domain CDA09_06035 IPR017871 ABC transporter, conserved site CDA09_06035 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl CDA09_06055 IPR008991 Translation protein SH3-like domain superfamily CDA09_06055 IPR018257 Ribosomal protein L19, conserved site CDA09_06055 IPR001857 Ribosomal protein L19 CDA09_06055 IPR038657 Ribosomal protein L19 superfamily CDA09_06060 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CDA09_06060 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CDA09_06060 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_06060 IPR029028 Alpha/beta knot methyltransferases CDA09_06060 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CDA09_06065 IPR011961 16S rRNA processing protein RimM CDA09_06065 IPR002676 RimM, N-terminal CDA09_06065 IPR036976 RimM, N-terminal domain superfamily CDA09_06065 IPR011033 PRC-barrel-like superfamily CDA09_06065 IPR027275 PRC-barrel domain CDA09_06065 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_06070 IPR000307 Ribosomal protein S16 CDA09_06070 IPR020592 Ribosomal protein S16, conserved site CDA09_06070 IPR023803 Ribosomal protein S16 domain superfamily CDA09_06080 IPR017039 Virulence factor BrkB CDA09_06080 IPR023679 Uncharacterised protein family UPF0761, bacterial CDA09_06085 IPR029039 Flavoprotein-like superfamily CDA09_06085 IPR010089 Flavoprotein WrbA-like CDA09_06085 IPR005025 NADPH-dependent FMN reductase-like CDA09_06085 IPR001226 Flavodoxin, conserved site CDA09_06085 IPR008254 Flavodoxin/nitric oxide synthase CDA09_06095 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CDA09_06095 IPR013785 Aldolase-type TIM barrel CDA09_06095 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CDA09_06095 IPR000891 Pyruvate carboxyltransferase CDA09_06095 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CDA09_06095 IPR005671 2-isopropylmalate synthase, bacterial-type CDA09_06110 IPR036909 Cytochrome c-like domain superfamily CDA09_06110 IPR009056 Cytochrome c-like domain CDA09_06110 IPR015170 Protein of unknown function DUF1924 CDA09_06120 IPR039420 Transcriptional regulatory protein WalR-like CDA09_06120 IPR011006 CheY-like superfamily CDA09_06120 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_06120 IPR001789 Signal transduction response regulator, receiver domain CDA09_06120 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_06125 IPR015014 PhoQ Sensor CDA09_06125 IPR038429 PhoQ Sensor superfamily CDA09_06125 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_06125 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06125 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06125 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_06125 IPR005467 Histidine kinase domain CDA09_06125 IPR003660 HAMP domain CDA09_06130 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase CDA09_06130 IPR000462 CDP-alcohol phosphatidyltransferase CDA09_06135 IPR003817 Phosphatidylserine decarboxylase-related CDA09_06135 IPR033175 Phosphatidylserine decarboxylase, archaeal-type CDA09_06140 IPR000506 Ketol-acid reductoisomerase, C-terminal CDA09_06140 IPR013023 Ketol-acid reductoisomerase CDA09_06140 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_06140 IPR013116 Ketol-acid reductoisomerase, N-terminal CDA09_06140 IPR014359 Ketol-acid reductoisomerase, prokaryotic CDA09_06140 IPR036291 NAD(P)-binding domain superfamily CDA09_06145 IPR004789 Acetolactate synthase, small subunit CDA09_06145 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CDA09_06145 IPR019455 Acetolactate synthase, small subunit, C-terminal CDA09_06145 IPR002912 ACT domain CDA09_06145 IPR039557 AHAS, ACT domain CDA09_06150 IPR012000 Thiamine pyrophosphate enzyme, central domain CDA09_06150 IPR039368 Acetolactate synthase large subunit, TPP binding domain CDA09_06150 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_06150 IPR029061 Thiamin diphosphate-binding fold CDA09_06150 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CDA09_06150 IPR012846 Acetolactate synthase, large subunit, biosynthetic CDA09_06150 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDA09_06150 IPR000399 TPP-binding enzyme, conserved site CDA09_06175 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase CDA09_06175 IPR027268 Peptidase M4/M1, CTD superfamily CDA09_06175 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CDA09_06175 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily CDA09_06175 IPR042097 Aminopeptidase N-like , N-terminal CDA09_06175 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily CDA09_06175 IPR014782 Peptidase M1, membrane alanine aminopeptidase CDA09_06175 IPR012779 Peptidase M1, alanyl aminopeptidase CDA09_06175 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CDA09_06185 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain CDA09_06185 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_06185 IPR003721 Pantoate-beta-alanine ligase CDA09_06190 IPR003700 Ketopantoate hydroxymethyltransferase CDA09_06190 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDA09_06190 IPR040442 Pyruvate kinase-like domain superfamily CDA09_06195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06195 IPR002624 Deoxynucleoside kinase CDA09_06195 IPR031314 Deoxynucleoside kinase domain CDA09_06205 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CDA09_06205 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CDA09_06210 IPR025866 Polymerase A arginine-rich C-terminal domain CDA09_06210 IPR010206 Poly(A) polymerase I CDA09_06210 IPR002646 Poly A polymerase, head domain CDA09_06210 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CDA09_06220 IPR001957 Chromosomal replication control, initiator DnaA CDA09_06220 IPR003593 AAA+ ATPase domain CDA09_06220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06220 IPR010921 Trp repressor/replication initiator CDA09_06220 IPR013159 Chromosomal replication initiator, DnaA C-terminal CDA09_06220 IPR020591 Chromosomal replication control, initiator DnaA-like CDA09_06220 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CDA09_06220 IPR013317 Chromosomal replication initiator protein DnaA CDA09_06225 IPR002549 Transmembrane protein TqsA-like CDA09_06230 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CDA09_06230 IPR036921 PurM-like, N-terminal domain superfamily CDA09_06230 IPR016188 PurM-like, N-terminal domain CDA09_06230 IPR036676 PurM-like, C-terminal domain superfamily CDA09_06230 IPR010918 PurM-like, C-terminal domain CDA09_06235 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB CDA09_06235 IPR006143 RND efflux pump, membrane fusion protein CDA09_06235 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_06240 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_06240 IPR001036 Acriflavin resistance protein CDA09_06250 IPR039657 Dimethylallyltransferase CDA09_06250 IPR018022 IPP transferase CDA09_06250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06265 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CDA09_06265 IPR007197 Radical SAM CDA09_06265 IPR040072 Methyltransferase (Class A) CDA09_06265 IPR013785 Aldolase-type TIM barrel CDA09_06275 IPR001478 PDZ domain CDA09_06275 IPR009003 Peptidase S1, PA clan CDA09_06275 IPR011782 Peptidase S1C, Do CDA09_06275 IPR036034 PDZ superfamily CDA09_06275 IPR001940 Peptidase S1C CDA09_06280 IPR003660 HAMP domain CDA09_06280 IPR005467 Histidine kinase domain CDA09_06280 IPR013727 Two-component sensor kinase, N-terminal CDA09_06280 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_06280 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_06280 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_06280 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06285 IPR011006 CheY-like superfamily CDA09_06285 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_06285 IPR039420 Transcriptional regulatory protein WalR-like CDA09_06285 IPR001789 Signal transduction response regulator, receiver domain CDA09_06285 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_06305 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_06305 IPR011006 CheY-like superfamily CDA09_06305 IPR039420 Transcriptional regulatory protein WalR-like CDA09_06305 IPR001789 Signal transduction response regulator, receiver domain CDA09_06305 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_06305 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_06305 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response CDA09_06310 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06310 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_06310 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06310 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_06310 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_06310 IPR005467 Histidine kinase domain CDA09_06310 IPR003660 HAMP domain CDA09_06315 IPR007383 Protein of unknown function DUF445 CDA09_06340 IPR001952 Alkaline phosphatase CDA09_06340 IPR018299 Alkaline phosphatase, active site CDA09_06340 IPR017850 Alkaline-phosphatase-like, core domain superfamily CDA09_06350 IPR029039 Flavoprotein-like superfamily CDA09_06350 IPR010089 Flavoprotein WrbA-like CDA09_06350 IPR005025 NADPH-dependent FMN reductase-like CDA09_06350 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic CDA09_06350 IPR008254 Flavodoxin/nitric oxide synthase CDA09_06355 IPR029020 Ammonium/urea transporter CDA09_06355 IPR024041 Ammonium transporter AmtB-like domain CDA09_06355 IPR018047 Ammonium transporter, conserved site CDA09_06355 IPR001905 Ammonium transporter CDA09_06360 IPR000620 EamA domain CDA09_06365 IPR017926 Glutamine amidotransferase CDA09_06365 IPR029062 Class I glutamine amidotransferase-like CDA09_06365 IPR011697 Peptidase C26 CDA09_06370 IPR011793 Putative glutamate--cysteine ligase YbdK CDA09_06370 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CDA09_06370 IPR006336 Glutamate--cysteine ligase, GCS2 CDA09_06380 IPR007450 Lipoprotein SmpA/OmlA CDA09_06380 IPR026592 Outer membrane protein assembly factor BamE CDA09_06380 IPR037873 BamE-like CDA09_06385 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CDA09_06385 IPR001296 Glycosyl transferase, family 1 CDA09_06400 IPR003918 NADH:ubiquinone oxidoreductase CDA09_06400 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CDA09_06405 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CDA09_06405 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CDA09_06415 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CDA09_06415 IPR003918 NADH:ubiquinone oxidoreductase CDA09_06420 IPR001135 NADH-quinone oxidoreductase, subunit D CDA09_06420 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CDA09_06420 IPR029014 [NiFe]-hydrogenase, large subunit CDA09_06420 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CDA09_06425 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CDA09_06425 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CDA09_06430 IPR032808 DoxX family CDA09_06435 IPR001697 Pyruvate kinase CDA09_06435 IPR015806 Pyruvate kinase, insert domain superfamily CDA09_06435 IPR015795 Pyruvate kinase, C-terminal CDA09_06435 IPR011037 Pyruvate kinase-like, insert domain superfamily CDA09_06435 IPR040442 Pyruvate kinase-like domain superfamily CDA09_06435 IPR015793 Pyruvate kinase, barrel CDA09_06435 IPR018209 Pyruvate kinase, active site CDA09_06435 IPR036918 Pyruvate kinase, C-terminal domain superfamily CDA09_06435 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDA09_06440 IPR038084 GlcG-like domain superfamily CDA09_06440 IPR005624 Haem-degrading CDA09_06445 IPR007835 MOFRL domain CDA09_06445 IPR038614 Glycerate kinase, N-terminal domain superfamily CDA09_06445 IPR039760 MOFRL domain-containing protein CDA09_06445 IPR025286 MOFRL-associated domain CDA09_06445 IPR037035 Glycerate kinase-like, C-terminal domain superfamily CDA09_06450 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CDA09_06450 IPR036291 NAD(P)-binding domain superfamily CDA09_06450 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_06450 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CDA09_06450 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CDA09_06450 IPR006398 2-hydroxy-3-oxopropionate reductase CDA09_06450 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CDA09_06450 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDA09_06455 IPR036237 Xylose isomerase-like superfamily CDA09_06455 IPR026040 Hydroxypyruvate isomerase-like CDA09_06455 IPR013022 Xylose isomerase-like, TIM barrel domain CDA09_06455 IPR017643 Hydroxypyruvate isomerase CDA09_06460 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_06460 IPR006397 Glyoxylate carboligase CDA09_06460 IPR029061 Thiamin diphosphate-binding fold CDA09_06460 IPR012000 Thiamine pyrophosphate enzyme, central domain CDA09_06460 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CDA09_06460 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDA09_06485 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06485 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06485 IPR017171 Signal transduction histidine kinase, MctS CDA09_06485 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDA09_06485 IPR033480 Single Cache domain 2 CDA09_06490 IPR001789 Signal transduction response regulator, receiver domain CDA09_06490 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CDA09_06490 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type CDA09_06490 IPR035909 Methylesterase CheB, C-terminal CDA09_06490 IPR011006 CheY-like superfamily CDA09_06495 IPR001789 Signal transduction response regulator, receiver domain CDA09_06495 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_06495 IPR011006 CheY-like superfamily CDA09_06495 IPR000792 Transcription regulator LuxR, C-terminal CDA09_06500 IPR000485 AsnC-type HTH domain CDA09_06500 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDA09_06500 IPR019888 Transcription regulator AsnC-type CDA09_06500 IPR011008 Dimeric alpha-beta barrel CDA09_06500 IPR011991 ArsR-like helix-turn-helix domain CDA09_06500 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_06500 IPR036390 Winged helix DNA-binding domain superfamily CDA09_06505 IPR005668 2-isopropylmalate synthase CDA09_06505 IPR000891 Pyruvate carboxyltransferase CDA09_06505 IPR013785 Aldolase-type TIM barrel CDA09_06505 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CDA09_06505 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CDA09_06505 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CDA09_06505 IPR039371 LeuA, N-terminal catalytic TIM barrel domain CDA09_06510 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_06510 IPR002104 Integrase, catalytic domain CDA09_06510 IPR011946 Integrase, integron-type CDA09_06510 IPR010998 Integrase/recombinase, N-terminal CDA09_06510 IPR004107 Integrase, SAM-like, N-terminal CDA09_06510 IPR013762 Integrase-like, catalytic domain superfamily CDA09_06515 IPR010998 Integrase/recombinase, N-terminal CDA09_06515 IPR004107 Integrase, SAM-like, N-terminal CDA09_06515 IPR013762 Integrase-like, catalytic domain superfamily CDA09_06515 IPR002104 Integrase, catalytic domain CDA09_06515 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_06520 IPR007069 Transposase, IS801/IS1294 CDA09_06520 IPR026889 Transposase zinc-binding domain CDA09_06530 IPR005119 LysR, substrate-binding CDA09_06530 IPR000847 Transcription regulator HTH, LysR CDA09_06530 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_06530 IPR036390 Winged helix DNA-binding domain superfamily CDA09_06540 IPR036366 PGBD superfamily CDA09_06540 IPR036365 PGBD-like superfamily CDA09_06540 IPR002477 Peptidoglycan binding-like CDA09_06540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06540 IPR003593 AAA+ ATPase domain CDA09_06570 IPR003593 AAA+ ATPase domain CDA09_06570 IPR011527 ABC transporter type 1, transmembrane domain CDA09_06570 IPR036640 ABC transporter type 1, transmembrane domain superfamily CDA09_06570 IPR003439 ABC transporter-like CDA09_06570 IPR017871 ABC transporter, conserved site CDA09_06570 IPR011917 ABC transporter, lipid A export, MsbA CDA09_06570 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06570 IPR039421 Type I protein exporter CDA09_06575 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_06580 IPR004550 L-asparaginase, type II CDA09_06580 IPR027475 Asparaginase/glutaminase, active site 2 CDA09_06580 IPR040919 Asparaginase/glutaminase, C-terminal CDA09_06580 IPR027473 L-asparaginase, C-terminal CDA09_06580 IPR020827 Asparaginase/glutaminase, active site 1 CDA09_06580 IPR037152 L-asparaginase, N-terminal domain superfamily CDA09_06580 IPR036152 Asparaginase/glutaminase-like superfamily CDA09_06580 IPR027474 L-asparaginase, N-terminal CDA09_06580 IPR006034 Asparaginase/glutaminase-like CDA09_06585 IPR035906 MetI-like superfamily CDA09_06585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_06585 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CDA09_06585 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ CDA09_06590 IPR035906 MetI-like superfamily CDA09_06590 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CDA09_06590 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_06590 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM CDA09_06595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06595 IPR003439 ABC transporter-like CDA09_06595 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CDA09_06595 IPR003593 AAA+ ATPase domain CDA09_06595 IPR017871 ABC transporter, conserved site CDA09_06600 IPR025944 Sigma-54 interaction domain, conserved site CDA09_06600 IPR003593 AAA+ ATPase domain CDA09_06600 IPR002197 DNA binding HTH domain, Fis-type CDA09_06600 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_06600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06600 IPR009057 Homeobox-like domain superfamily CDA09_06600 IPR011006 CheY-like superfamily CDA09_06600 IPR001789 Signal transduction response regulator, receiver domain CDA09_06600 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_06600 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_06605 IPR015590 Aldehyde dehydrogenase domain CDA09_06605 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDA09_06605 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_06605 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_06605 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_06620 IPR035919 EAL domain superfamily CDA09_06620 IPR000160 GGDEF domain CDA09_06620 IPR029787 Nucleotide cyclase CDA09_06620 IPR005330 MHYT domain CDA09_06620 IPR001633 EAL domain CDA09_06710 IPR001444 Flagellar basal body rod protein, N-terminal CDA09_06710 IPR006300 Flagellar basal-body rod protein FlgB CDA09_06710 IPR019776 Flagellar basal body rod protein, conserved site CDA09_06715 IPR001444 Flagellar basal body rod protein, N-terminal CDA09_06715 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDA09_06715 IPR006299 Flagellar basal-body rod protein FlgC CDA09_06715 IPR019776 Flagellar basal body rod protein, conserved site CDA09_06720 IPR025963 FlgD Tudor-like domain CDA09_06720 IPR005648 Flagellar hook capping protein CDA09_06720 IPR025965 FlgD Ig-like domain CDA09_06725 IPR019776 Flagellar basal body rod protein, conserved site CDA09_06725 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CDA09_06725 IPR037058 Flagellar hook protein FlgE superfamily CDA09_06725 IPR011491 Flagellar hook protein FlgE CDA09_06725 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CDA09_06725 IPR001444 Flagellar basal body rod protein, N-terminal CDA09_06725 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDA09_06730 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDA09_06730 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CDA09_06730 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CDA09_06730 IPR019776 Flagellar basal body rod protein, conserved site CDA09_06730 IPR001444 Flagellar basal body rod protein, N-terminal CDA09_06735 IPR019776 Flagellar basal body rod protein, conserved site CDA09_06735 IPR001444 Flagellar basal body rod protein, N-terminal CDA09_06735 IPR012834 Flagellar basal-body rod FlgG CDA09_06735 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CDA09_06735 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CDA09_06735 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDA09_06740 IPR000527 Flagellar L-ring protein CDA09_06745 IPR001782 Flagellar P-ring protein CDA09_06755 IPR019776 Flagellar basal body rod protein, conserved site CDA09_06755 IPR002371 Flagellar hook-associated protein 1 CDA09_06755 IPR001444 Flagellar basal body rod protein, N-terminal CDA09_06755 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDA09_06760 IPR001029 Flagellin, D0/D1 domain CDA09_06760 IPR013384 Flagellar hook-associated protein 3 CDA09_06770 IPR006303 Flagellar biosynthesis protein FliR CDA09_06770 IPR002010 Type III secretion system inner membrane R protein CDA09_06775 IPR006305 Flagellar biosynthesis protein FliQ CDA09_06775 IPR002191 Bacterial export protein family 3 CDA09_06780 IPR005837 Flagellar transport protein FliP CDA09_06780 IPR005838 Type III secretion system inner membrane P protein CDA09_06785 IPR022781 Flagellar biosynthesis protein, FliO CDA09_06790 IPR001543 Surface presentation of antigen (SpoA) CDA09_06790 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CDA09_06790 IPR012826 Flagellar motor switch FliN CDA09_06790 IPR036429 SpoA-like superfamily CDA09_06795 IPR036429 SpoA-like superfamily CDA09_06795 IPR001543 Surface presentation of antigen (SpoA) CDA09_06795 IPR001689 Flagellar motor switch protein FliM CDA09_06795 IPR028976 CheC-like superfamily CDA09_06815 IPR003593 AAA+ ATPase domain CDA09_06815 IPR040627 T3SS EscN ATPase, C-terminal CDA09_06815 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06815 IPR005714 ATPase, type III secretion system, FliI/YscN CDA09_06815 IPR032463 ATPase, type III secretion system, FliI CDA09_06815 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CDA09_06815 IPR020005 Flagellar export ATPase FliI, clade 1 CDA09_06815 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CDA09_06825 IPR023087 Flagellar motor switch protein FliG, C-terminal CDA09_06825 IPR011002 Flagellar motor switch protein FliG, alpha-helical CDA09_06825 IPR032779 Flagellar motor switch protein FliG, middle domain CDA09_06825 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CDA09_06825 IPR000090 Flagellar motor switch protein FliG CDA09_06830 IPR006182 Secretory protein YscJ/FliF CDA09_06830 IPR000067 Flagellar M-ring protein FliF CDA09_06830 IPR013556 Flagellar M-ring C-terminal CDA09_06835 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_06835 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06835 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_06835 IPR000014 PAS domain CDA09_06835 IPR000700 PAS-associated, C-terminal CDA09_06835 IPR035965 PAS domain superfamily CDA09_06835 IPR003660 HAMP domain CDA09_06835 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06835 IPR013767 PAS fold CDA09_06835 IPR005467 Histidine kinase domain CDA09_06835 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_06840 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_06840 IPR001789 Signal transduction response regulator, receiver domain CDA09_06840 IPR003593 AAA+ ATPase domain CDA09_06840 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_06840 IPR025944 Sigma-54 interaction domain, conserved site CDA09_06840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_06840 IPR002197 DNA binding HTH domain, Fis-type CDA09_06840 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_06840 IPR009057 Homeobox-like domain superfamily CDA09_06840 IPR011006 CheY-like superfamily CDA09_06845 IPR001624 Flagellar hook-basal body complex protein FliE CDA09_06850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_06850 IPR005467 Histidine kinase domain CDA09_06850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06850 IPR011006 CheY-like superfamily CDA09_06850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_06850 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06850 IPR001789 Signal transduction response regulator, receiver domain CDA09_06850 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDA09_06850 IPR036641 HPT domain superfamily CDA09_06850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_06855 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CDA09_06855 IPR023787 Type III secretion system flagellar brake protein YcgR CDA09_06855 IPR009875 PilZ domain CDA09_06860 IPR029025 Type III secretion system substrate exporter, C-terminal CDA09_06860 IPR006135 Type III secretion system substrate exporter CDA09_06860 IPR006136 Flagellar biosynthetic protein FlhB CDA09_06875 IPR036584 Flagellar protein FliS superfamily CDA09_06875 IPR003713 Flagellar protein FliS CDA09_06880 IPR003481 Flagellar hook-associated protein 2, N-terminal CDA09_06880 IPR040026 Flagellar hook-associated protein 2 CDA09_06880 IPR010809 Flagellar hook-associated protein 2, C-terminal CDA09_06885 IPR035924 FlaG-like superfamily CDA09_06885 IPR005186 FlaG protein CDA09_06890 IPR001029 Flagellin, D0/D1 domain CDA09_06890 IPR001492 Flagellin CDA09_06895 IPR001789 Signal transduction response regulator, receiver domain CDA09_06895 IPR029787 Nucleotide cyclase CDA09_06895 IPR000160 GGDEF domain CDA09_06895 IPR011006 CheY-like superfamily CDA09_06900 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDA09_06900 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CDA09_06900 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_06900 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CDA09_06900 IPR023753 FAD/NAD(P)-binding domain CDA09_06900 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CDA09_06900 IPR006258 Dihydrolipoamide dehydrogenase CDA09_06905 IPR011053 Single hybrid motif CDA09_06905 IPR004167 Peripheral subunit-binding domain CDA09_06905 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CDA09_06905 IPR000089 Biotin/lipoyl attachment CDA09_06905 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex CDA09_06905 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CDA09_06905 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDA09_06905 IPR036625 E3-binding domain superfamily CDA09_06910 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CDA09_06910 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal CDA09_06910 IPR005474 Transketolase, N-terminal CDA09_06910 IPR029061 Thiamin diphosphate-binding fold CDA09_06910 IPR004660 Pyruvate dehydrogenase E1 component CDA09_06910 IPR041621 Pyruvate dehydrogenase E1 component, middle domain CDA09_06920 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_06920 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_06920 IPR005467 Histidine kinase domain CDA09_06920 IPR035965 PAS domain superfamily CDA09_06920 IPR000700 PAS-associated, C-terminal CDA09_06920 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_06920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_06920 IPR000014 PAS domain CDA09_06920 IPR001610 PAC motif CDA09_06920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_06920 IPR013767 PAS fold CDA09_06925 IPR001789 Signal transduction response regulator, receiver domain CDA09_06925 IPR011006 CheY-like superfamily CDA09_06925 IPR000792 Transcription regulator LuxR, C-terminal CDA09_06925 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_06945 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CDA09_06945 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDA09_06945 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDA09_06945 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CDA09_06945 IPR036291 NAD(P)-binding domain superfamily CDA09_06950 IPR033747 Class I PurE CDA09_06950 IPR000031 PurE domain CDA09_06950 IPR024694 PurE, prokaryotic type CDA09_06950 IPR035893 PurE domain superfamily CDA09_06955 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CDA09_06955 IPR013815 ATP-grasp fold, subdomain 1 CDA09_06955 IPR016185 Pre-ATP-grasp domain superfamily CDA09_06955 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit CDA09_06955 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain CDA09_06955 IPR011054 Rudiment single hybrid motif CDA09_06955 IPR011761 ATP-grasp fold CDA09_06960 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDA09_06960 IPR005145 Putative GTP-binding controlling metal-binding domain CDA09_06960 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily CDA09_06960 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CDA09_06960 IPR006070 YrdC-like domain CDA09_06995 IPR013321 Arc-type ribbon-helix-helix CDA09_06995 IPR010985 Ribbon-helix-helix CDA09_07025 IPR002744 MIP18 family-like CDA09_07025 IPR034904 Fe-S cluster assembly domain superfamily CDA09_07035 IPR005134 Uncharacterised protein family UPF0114 CDA09_07035 IPR020761 Uncharacterised protein family UPF0114, bacteria CDA09_07040 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme CDA09_07040 IPR006674 HD domain CDA09_07040 IPR003607 HD/PDEase domain CDA09_07040 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CDA09_07040 IPR002912 ACT domain CDA09_07045 IPR036005 Creatinase/aminopeptidase-like CDA09_07045 IPR001714 Peptidase M24, methionine aminopeptidase CDA09_07045 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CDA09_07045 IPR000994 Peptidase M24 CDA09_07050 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CDA09_07050 IPR018130 Ribosomal protein S2, conserved site CDA09_07050 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CDA09_07050 IPR001865 Ribosomal protein S2 CDA09_07055 IPR001816 Translation elongation factor EFTs/EF1B CDA09_07055 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CDA09_07055 IPR018101 Translation elongation factor Ts, conserved site CDA09_07055 IPR009060 UBA-like superfamily CDA09_07055 IPR036402 Elongation factor Ts, dimerisation domain superfamily CDA09_07060 IPR015963 Uridylate kinase, bacteria CDA09_07060 IPR036393 Acetylglutamate kinase-like superfamily CDA09_07060 IPR001048 Aspartate/glutamate/uridylate kinase CDA09_07060 IPR011817 Uridylate kinase CDA09_07065 IPR023584 Ribosome recycling factor domain CDA09_07065 IPR002661 Ribosome recycling factor CDA09_07065 IPR036191 RRF superfamily CDA09_07070 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CDA09_07070 IPR036424 Decaprenyl diphosphate synthase-like superfamily CDA09_07070 IPR001441 Decaprenyl diphosphate synthase-like CDA09_07075 IPR000374 Phosphatidate cytidylyltransferase CDA09_07080 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CDA09_07080 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CDA09_07080 IPR026877 DXP reductoisomerase C-terminal domain CDA09_07080 IPR036291 NAD(P)-binding domain superfamily CDA09_07080 IPR036169 DXP reductoisomerase, C-terminal domain superfamily CDA09_07080 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CDA09_07085 IPR008915 Peptidase M50 CDA09_07085 IPR041489 PDZ domain 6 CDA09_07085 IPR001478 PDZ domain CDA09_07085 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CDA09_07085 IPR036034 PDZ superfamily CDA09_07090 IPR039910 Surface antigen D15-like CDA09_07090 IPR010827 POTRA domain, BamA/TamA-like CDA09_07090 IPR000184 Bacterial surface antigen (D15) CDA09_07090 IPR034746 POTRA domain CDA09_07090 IPR023707 Outer membrane protein assembly factor BamA CDA09_07100 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD CDA09_07100 IPR011004 Trimeric LpxA-like superfamily CDA09_07100 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CDA09_07100 IPR001451 Hexapeptide repeat CDA09_07100 IPR018357 Hexapeptide transferase, conserved site CDA09_07105 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CDA09_07105 IPR029069 HotDog domain superfamily CDA09_07105 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CDA09_07110 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily CDA09_07110 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal CDA09_07110 IPR001451 Hexapeptide repeat CDA09_07110 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CDA09_07110 IPR011004 Trimeric LpxA-like superfamily CDA09_07115 IPR003835 Glycosyl transferase, family 19 CDA09_07120 IPR012337 Ribonuclease H-like superfamily CDA09_07120 IPR001352 Ribonuclease HII/HIII CDA09_07120 IPR022898 Ribonuclease HII CDA09_07120 IPR024567 Ribonuclease HII/HIII domain CDA09_07120 IPR036397 Ribonuclease H superfamily CDA09_07130 IPR001537 tRNA/rRNA methyltransferase, SpoU type CDA09_07130 IPR029028 Alpha/beta knot methyltransferases CDA09_07130 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CDA09_07130 IPR029064 50S ribosomal protein L30e-like CDA09_07130 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_07135 IPR004472 Dethiobiotin synthase BioD CDA09_07135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07140 IPR013216 Methyltransferase type 11 CDA09_07140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_07140 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CDA09_07145 IPR000073 Alpha/beta hydrolase fold-1 CDA09_07145 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase CDA09_07145 IPR029058 Alpha/Beta hydrolase fold CDA09_07150 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_07150 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_07150 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_07150 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria CDA09_07150 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CDA09_07150 IPR004839 Aminotransferase, class I/classII CDA09_07155 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_07155 IPR005814 Aminotransferase class-III CDA09_07155 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_07155 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_07155 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CDA09_07160 IPR005583 Peroxide stress protein YaaA CDA09_07165 IPR040626 Cytosolic carboxypeptidase, N-terminal CDA09_07165 IPR000834 Peptidase M14, carboxypeptidase A CDA09_07170 IPR036412 HAD-like superfamily CDA09_07170 IPR023214 HAD superfamily CDA09_07175 IPR006218 DAHP synthetase I/KDSA CDA09_07175 IPR006219 DHAP synthase, class 1 CDA09_07175 IPR013785 Aldolase-type TIM barrel CDA09_07180 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_07180 IPR023753 FAD/NAD(P)-binding domain CDA09_07180 IPR041364 Rubredoxin binding domain CDA09_07185 IPR024922 Rubredoxin CDA09_07185 IPR024934 Rubredoxin-like domain CDA09_07185 IPR024935 Rubredoxin domain CDA09_07185 IPR018527 Rubredoxin, iron-binding site CDA09_07210 IPR008719 Nitrous oxide reductase accessory protein NosL CDA09_07215 IPR032688 ABC-2 family transporter protein CDA09_07220 IPR003439 ABC transporter-like CDA09_07220 IPR003593 AAA+ ATPase domain CDA09_07220 IPR017871 ABC transporter, conserved site CDA09_07220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07235 IPR011399 Nitrous oxide reductase expression regulator NosR CDA09_07235 IPR007329 FMN-binding CDA09_07235 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_07240 IPR006311 Twin-arginine translocation pathway, signal sequence CDA09_07240 IPR041142 Nitrous oxide reductase, propeller repeat 2 CDA09_07240 IPR041114 Nitrous oxide reductase, propeller repeat 1 CDA09_07240 IPR023644 Nitrous-oxide reductase CDA09_07240 IPR034205 Nitrous-oxide reductase, C-terminal CDA09_07240 IPR011045 Nitrous oxide reductase, N-terminal CDA09_07240 IPR028096 EfeO-type cupredoxin-like domain CDA09_07240 IPR008972 Cupredoxin CDA09_07240 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CDA09_07240 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CDA09_07250 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_07250 IPR001789 Signal transduction response regulator, receiver domain CDA09_07250 IPR000792 Transcription regulator LuxR, C-terminal CDA09_07250 IPR011006 CheY-like superfamily CDA09_07250 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_07255 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07255 IPR003660 HAMP domain CDA09_07255 IPR005467 Histidine kinase domain CDA09_07255 IPR029095 NarX-like, N-terminal CDA09_07255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07255 IPR042295 NarX-like, N-terminal domain superfamily CDA09_07255 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing CDA09_07255 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDA09_07260 IPR036197 NarG-like superfamily CDA09_07260 IPR003816 Nitrate reductase, gamma subunit CDA09_07260 IPR023234 NarG-like domain CDA09_07265 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 CDA09_07265 IPR036411 TorD-like superfamily CDA09_07265 IPR003765 Nitrate reductase chaperone, NarJ CDA09_07265 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 CDA09_07265 IPR020945 DMSO/Nitrate reductase chaperone CDA09_07270 IPR006547 Nitrate reductase, beta subunit CDA09_07270 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_07270 IPR029263 Respiratory nitrate reductase beta, C-terminal CDA09_07270 IPR038262 Nitrate reductase beta, C-terminal domain superfamily CDA09_07275 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CDA09_07275 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDA09_07275 IPR006656 Molybdopterin oxidoreductase CDA09_07275 IPR006657 Molybdopterin dinucleotide-binding domain CDA09_07275 IPR006468 Nitrate reductase, alpha subunit CDA09_07275 IPR028189 Nitrate reductase, alpha subunit, N-terminal CDA09_07275 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_07275 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CDA09_07275 IPR037943 Nitrate reductase alpha subunit-like, MopB domain CDA09_07280 IPR036259 MFS transporter superfamily CDA09_07280 IPR011701 Major facilitator superfamily CDA09_07280 IPR004737 Nitrate transporter CDA09_07285 IPR036259 MFS transporter superfamily CDA09_07285 IPR020846 Major facilitator superfamily domain CDA09_07285 IPR011701 Major facilitator superfamily CDA09_07315 IPR001533 Pterin 4 alpha carbinolamine dehydratase CDA09_07315 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily CDA09_07320 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_07320 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDA09_07320 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase CDA09_07320 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_07320 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_07330 IPR005802 Aminodeoxychorismate synthase, component I CDA09_07330 IPR005801 ADC synthase CDA09_07330 IPR019999 Anthranilate synthase component I-like CDA09_07330 IPR006805 Anthranilate synthase component I, N-terminal CDA09_07330 IPR015890 Chorismate-utilising enzyme, C-terminal CDA09_07335 IPR013656 PAS fold-4 CDA09_07335 IPR029787 Nucleotide cyclase CDA09_07335 IPR000700 PAS-associated, C-terminal CDA09_07335 IPR035965 PAS domain superfamily CDA09_07335 IPR000014 PAS domain CDA09_07335 IPR000160 GGDEF domain CDA09_07340 IPR023073 DNA polymerase, error-prone CDA09_07340 IPR004805 DNA polymerase III, alpha subunit CDA09_07340 IPR016195 Polymerase/histidinol phosphatase-like CDA09_07340 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDA09_07340 IPR004013 PHP domain CDA09_07340 IPR029460 DNA polymerase, helix-hairpin-helix motif CDA09_07340 IPR040982 DNA polymerase III alpha subunit finger domain CDA09_07340 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CDA09_07345 IPR003791 Protein of unknown function UPF0178 CDA09_07355 IPR002528 Multi antimicrobial extrusion protein CDA09_07385 IPR010523 Activator of aromatic catabolism CDA09_07385 IPR004096 4-vinyl reductase, 4VR CDA09_07385 IPR025944 Sigma-54 interaction domain, conserved site CDA09_07385 IPR009057 Homeobox-like domain superfamily CDA09_07385 IPR002197 DNA binding HTH domain, Fis-type CDA09_07385 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CDA09_07385 IPR003593 AAA+ ATPase domain CDA09_07385 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_07385 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_07385 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_07385 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07390 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_07390 IPR000014 PAS domain CDA09_07390 IPR035965 PAS domain superfamily CDA09_07390 IPR000700 PAS-associated, C-terminal CDA09_07390 IPR001610 PAC motif CDA09_07390 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07390 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07390 IPR005467 Histidine kinase domain CDA09_07395 IPR001789 Signal transduction response regulator, receiver domain CDA09_07395 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_07395 IPR011006 CheY-like superfamily CDA09_07395 IPR000792 Transcription regulator LuxR, C-terminal CDA09_07395 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_07400 IPR016705 Photosynthesis system II assembly factor Ycf48/Hcf136 CDA09_07400 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CDA09_07400 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CDA09_07425 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_07425 IPR013149 Alcohol dehydrogenase, C-terminal CDA09_07425 IPR036736 ACP-like superfamily CDA09_07425 IPR014043 Acyl transferase CDA09_07425 IPR013154 Alcohol dehydrogenase, N-terminal CDA09_07425 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CDA09_07425 IPR009081 Phosphopantetheine binding ACP domain CDA09_07425 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CDA09_07425 IPR001227 Acyl transferase domain superfamily CDA09_07425 IPR036291 NAD(P)-binding domain superfamily CDA09_07425 IPR016039 Thiolase-like CDA09_07425 IPR011032 GroES-like superfamily CDA09_07425 IPR013968 Polyketide synthase, ketoreductase domain CDA09_07425 IPR020843 Polyketide synthase, enoylreductase domain CDA09_07425 IPR042104 Polyketide synthase, dehydratase domain superfamily CDA09_07425 IPR032821 Ketoacyl-synthetase, C-terminal extension CDA09_07425 IPR018201 Beta-ketoacyl synthase, active site CDA09_07425 IPR014031 Beta-ketoacyl synthase, C-terminal CDA09_07425 IPR014030 Beta-ketoacyl synthase, N-terminal CDA09_07425 IPR020807 Polyketide synthase, dehydratase domain CDA09_07425 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDA09_07430 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07430 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_07430 IPR036291 NAD(P)-binding domain superfamily CDA09_07430 IPR011283 Acetoacetyl-CoA reductase CDA09_07435 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_07435 IPR036291 NAD(P)-binding domain superfamily CDA09_07435 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_07435 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_07440 IPR023606 CoA-transferase family III domain superfamily CDA09_07440 IPR003673 CoA-transferase family III CDA09_07445 IPR023606 CoA-transferase family III domain superfamily CDA09_07445 IPR003673 CoA-transferase family III CDA09_07455 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_07455 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_07455 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_07455 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_07455 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_07455 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_07460 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_07460 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_07460 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_07460 IPR029045 ClpP/crotonase-like domain superfamily CDA09_07465 IPR005247 YbhB/YbcL CDA09_07465 IPR036610 PEBP-like superfamily CDA09_07465 IPR008914 Phosphatidylethanolamine-binding protein CDA09_07475 IPR024501 Protein of unknown function DUF3141 CDA09_07475 IPR029058 Alpha/Beta hydrolase fold CDA09_07485 IPR033932 YtcJ like CDA09_07485 IPR032466 Metal-dependent hydrolase CDA09_07485 IPR011059 Metal-dependent hydrolase, composite domain superfamily CDA09_07485 IPR013108 Amidohydrolase 3 CDA09_07525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07525 IPR011704 ATPase, dynein-related, AAA domain CDA09_07525 IPR013615 CbbQ/NirQ/NorQ, C-terminal CDA09_07530 IPR040565 Benzylsuccinate synthase beta subunit CDA09_07535 IPR001150 Glycine radical domain CDA09_07535 IPR004184 Pyruvate formate lyase domain CDA09_07540 IPR013161 Benzylsuccinate synthase gamma subunit CDA09_07540 IPR038640 Benzylsuccinate synthase gamma subunit superfamily CDA09_07545 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_07545 IPR013785 Aldolase-type TIM barrel CDA09_07545 IPR034462 Benzylsuccinate synthase activase CDA09_07545 IPR023880 Benzylsuccinate synthase activating enzyme CDA09_07545 IPR034457 Organic radical-activating enzymes CDA09_07545 IPR012839 Organic radical enzyme activase CDA09_07545 IPR001989 Radical-activating enzyme, conserved site CDA09_07545 IPR007197 Radical SAM CDA09_07545 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_07550 IPR035965 PAS domain superfamily CDA09_07550 IPR000700 PAS-associated, C-terminal CDA09_07550 IPR000014 PAS domain CDA09_07550 IPR005467 Histidine kinase domain CDA09_07550 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07550 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07550 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_07550 IPR001610 PAC motif CDA09_07565 IPR018634 Chromate resistance exported protein CDA09_07580 IPR018634 Chromate resistance exported protein CDA09_07595 IPR036458 Sodium:dicarboxylate symporter superfamily CDA09_07595 IPR018107 Sodium:dicarboxylate symporter, conserved site CDA09_07595 IPR001991 Sodium:dicarboxylate symporter CDA09_07595 IPR023954 C4-dicarboxylate transport protein CDA09_07600 IPR002781 Transmembrane protein TauE-like CDA09_07605 IPR033479 Double Cache domain 1 CDA09_07605 IPR029151 Periplasmic sensor-like domain superfamily CDA09_07605 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_07605 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_07605 IPR005467 Histidine kinase domain CDA09_07605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07605 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_07605 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CDA09_07660 IPR005467 Histidine kinase domain CDA09_07660 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_07660 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07660 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_07660 IPR000700 PAS-associated, C-terminal CDA09_07660 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_07660 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07665 IPR001789 Signal transduction response regulator, receiver domain CDA09_07665 IPR011006 CheY-like superfamily CDA09_07670 IPR029016 GAF-like domain superfamily CDA09_07670 IPR003018 GAF domain CDA09_07670 IPR005467 Histidine kinase domain CDA09_07670 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07670 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07670 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDA09_07675 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_07675 IPR011006 CheY-like superfamily CDA09_07675 IPR000792 Transcription regulator LuxR, C-terminal CDA09_07675 IPR001789 Signal transduction response regulator, receiver domain CDA09_07685 IPR042099 AMP-dependent synthetase-like superfamily CDA09_07685 IPR000873 AMP-dependent synthetase/ligase CDA09_07695 IPR001789 Signal transduction response regulator, receiver domain CDA09_07695 IPR003607 HD/PDEase domain CDA09_07695 IPR011006 CheY-like superfamily CDA09_07695 IPR037522 HD-GYP domain CDA09_07700 IPR033479 Double Cache domain 1 CDA09_07700 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07700 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07700 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_07700 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_07700 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CDA09_07700 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_07700 IPR029151 Periplasmic sensor-like domain superfamily CDA09_07700 IPR005467 Histidine kinase domain CDA09_07705 IPR011006 CheY-like superfamily CDA09_07705 IPR003607 HD/PDEase domain CDA09_07705 IPR037522 HD-GYP domain CDA09_07705 IPR001789 Signal transduction response regulator, receiver domain CDA09_07710 IPR025944 Sigma-54 interaction domain, conserved site CDA09_07710 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_07710 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_07710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07710 IPR001789 Signal transduction response regulator, receiver domain CDA09_07710 IPR002197 DNA binding HTH domain, Fis-type CDA09_07710 IPR009057 Homeobox-like domain superfamily CDA09_07710 IPR011006 CheY-like superfamily CDA09_07710 IPR003593 AAA+ ATPase domain CDA09_07710 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_07715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07715 IPR006689 Small GTPase superfamily, ARF/SAR type CDA09_07720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07720 IPR005467 Histidine kinase domain CDA09_07720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_07720 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07720 IPR033479 Double Cache domain 1 CDA09_07720 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_07720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_07720 IPR029151 Periplasmic sensor-like domain superfamily CDA09_07720 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CDA09_07725 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07725 IPR037257 General secretory system II, protein E, N-terminal superfamily CDA09_07725 IPR042181 Type II secretion system, protein E, N-terminal CDA09_07725 IPR013369 Type II secretion system GspE CDA09_07725 IPR001482 Type II/IV secretion system protein CDA09_07730 IPR011006 CheY-like superfamily CDA09_07730 IPR001789 Signal transduction response regulator, receiver domain CDA09_07730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_07730 IPR013656 PAS fold-4 CDA09_07730 IPR035965 PAS domain superfamily CDA09_07730 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_07730 IPR000014 PAS domain CDA09_07730 IPR005467 Histidine kinase domain CDA09_07730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07730 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_07730 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07735 IPR005330 MHYT domain CDA09_07735 IPR000160 GGDEF domain CDA09_07735 IPR035919 EAL domain superfamily CDA09_07735 IPR001633 EAL domain CDA09_07735 IPR029787 Nucleotide cyclase CDA09_07740 IPR001610 PAC motif CDA09_07740 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_07740 IPR000014 PAS domain CDA09_07740 IPR000700 PAS-associated, C-terminal CDA09_07740 IPR035965 PAS domain superfamily CDA09_07740 IPR013656 PAS fold-4 CDA09_07740 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_07740 IPR001789 Signal transduction response regulator, receiver domain CDA09_07740 IPR005467 Histidine kinase domain CDA09_07740 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_07740 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07740 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07740 IPR011006 CheY-like superfamily CDA09_07745 IPR000792 Transcription regulator LuxR, C-terminal CDA09_07745 IPR001789 Signal transduction response regulator, receiver domain CDA09_07745 IPR011006 CheY-like superfamily CDA09_07745 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_07750 IPR008978 HSP20-like chaperone CDA09_07750 IPR031107 Small heat shock protein HSP20 CDA09_07750 IPR002068 Alpha crystallin/Hsp20 domain CDA09_07755 IPR031107 Small heat shock protein HSP20 CDA09_07755 IPR002068 Alpha crystallin/Hsp20 domain CDA09_07755 IPR008978 HSP20-like chaperone CDA09_07760 IPR005330 MHYT domain CDA09_07760 IPR035919 EAL domain superfamily CDA09_07760 IPR001633 EAL domain CDA09_07760 IPR000160 GGDEF domain CDA09_07760 IPR029787 Nucleotide cyclase CDA09_07770 IPR010105 TonB-dependent siderophore receptor CDA09_07770 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_07770 IPR000531 TonB-dependent receptor-like, beta-barrel CDA09_07770 IPR037066 TonB-dependent receptor, plug domain superfamily CDA09_07770 IPR039426 Vitamin B12 transporter BtuB-like CDA09_07770 IPR012910 TonB-dependent receptor, plug domain CDA09_07785 IPR018170 Aldo/keto reductase, conserved site CDA09_07785 IPR020471 Aldo/keto reductase CDA09_07785 IPR023210 NADP-dependent oxidoreductase domain CDA09_07785 IPR036812 NADP-dependent oxidoreductase domain superfamily CDA09_07790 IPR022383 Lactate/malate dehydrogenase, C-terminal CDA09_07790 IPR001236 Lactate/malate dehydrogenase, N-terminal CDA09_07790 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CDA09_07790 IPR011275 Malate dehydrogenase, type 3 CDA09_07790 IPR036291 NAD(P)-binding domain superfamily CDA09_07790 IPR001557 L-lactate/malate dehydrogenase CDA09_07800 IPR035919 EAL domain superfamily CDA09_07800 IPR001633 EAL domain CDA09_07800 IPR000160 GGDEF domain CDA09_07800 IPR005330 MHYT domain CDA09_07800 IPR029787 Nucleotide cyclase CDA09_07805 IPR002711 HNH endonuclease CDA09_07805 IPR003615 HNH nuclease CDA09_07810 IPR036249 Thioredoxin-like superfamily CDA09_07810 IPR029760 Glutathione peroxidase conserved site CDA09_07810 IPR029759 Glutathione peroxidase active site CDA09_07810 IPR000889 Glutathione peroxidase CDA09_07815 IPR040079 Glutathione Transferase family CDA09_07815 IPR004045 Glutathione S-transferase, N-terminal CDA09_07815 IPR004046 Glutathione S-transferase, C-terminal CDA09_07815 IPR036249 Thioredoxin-like superfamily CDA09_07815 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_07815 IPR010987 Glutathione S-transferase, C-terminal-like CDA09_07825 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_07825 IPR001789 Signal transduction response regulator, receiver domain CDA09_07825 IPR011006 CheY-like superfamily CDA09_07825 IPR000792 Transcription regulator LuxR, C-terminal CDA09_07830 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07830 IPR007895 MASE1 CDA09_07830 IPR005467 Histidine kinase domain CDA09_07830 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07830 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDA09_07865 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CDA09_07865 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_07865 IPR018313 Solute-binding protein family 3, conserved site CDA09_07870 IPR030199 Histidine transport system permease protein HisQ CDA09_07870 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CDA09_07870 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_07870 IPR035906 MetI-like superfamily CDA09_07875 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CDA09_07875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_07875 IPR035906 MetI-like superfamily CDA09_07880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07880 IPR017871 ABC transporter, conserved site CDA09_07880 IPR003439 ABC transporter-like CDA09_07880 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CDA09_07880 IPR003593 AAA+ ATPase domain CDA09_07895 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_07895 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_07895 IPR005467 Histidine kinase domain CDA09_07895 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_07895 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_07895 IPR001610 PAC motif CDA09_07895 IPR000014 PAS domain CDA09_07895 IPR000700 PAS-associated, C-terminal CDA09_07895 IPR035965 PAS domain superfamily CDA09_07895 IPR013767 PAS fold CDA09_07895 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_07905 IPR003855 Potassium transporter CDA09_07905 IPR023051 Potassium uptake protein, low affinity, Kup CDA09_07920 IPR013766 Thioredoxin domain CDA09_07920 IPR036249 Thioredoxin-like superfamily CDA09_07920 IPR003782 Copper chaperone SCO1/SenC CDA09_07925 IPR020855 Ureohydrolase, manganese-binding site CDA09_07925 IPR023696 Ureohydrolase domain superfamily CDA09_07925 IPR006035 Ureohydrolase CDA09_07925 IPR014033 Arginase CDA09_07935 IPR003593 AAA+ ATPase domain CDA09_07935 IPR003018 GAF domain CDA09_07935 IPR029016 GAF-like domain superfamily CDA09_07935 IPR025944 Sigma-54 interaction domain, conserved site CDA09_07935 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_07935 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07935 IPR002197 DNA binding HTH domain, Fis-type CDA09_07935 IPR009057 Homeobox-like domain superfamily CDA09_07940 IPR016160 Aldehyde dehydrogenase, cysteine active site CDA09_07940 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_07940 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDA09_07940 IPR015590 Aldehyde dehydrogenase domain CDA09_07940 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_07940 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_07960 IPR003439 ABC transporter-like CDA09_07960 IPR003593 AAA+ ATPase domain CDA09_07960 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07960 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB CDA09_07960 IPR017871 ABC transporter, conserved site CDA09_07965 IPR003593 AAA+ ATPase domain CDA09_07965 IPR003439 ABC transporter-like CDA09_07965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_07965 IPR017871 ABC transporter, conserved site CDA09_08005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08005 IPR029016 GAF-like domain superfamily CDA09_08005 IPR003018 GAF domain CDA09_08005 IPR003593 AAA+ ATPase domain CDA09_08005 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_08005 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_08005 IPR002197 DNA binding HTH domain, Fis-type CDA09_08005 IPR025944 Sigma-54 interaction domain, conserved site CDA09_08005 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_08005 IPR009057 Homeobox-like domain superfamily CDA09_08015 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 CDA09_08015 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 CDA09_08015 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily CDA09_08015 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal CDA09_08015 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal CDA09_08015 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal CDA09_08020 IPR023753 FAD/NAD(P)-binding domain CDA09_08020 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CDA09_08020 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_08020 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CDA09_08020 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CDA09_08020 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB CDA09_08020 IPR017121 Nitrite reductase [NAD(P)H], large subunit CDA09_08020 IPR007419 BFD-like [2Fe-2S]-binding domain CDA09_08020 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal CDA09_08020 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CDA09_08035 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_08035 IPR035906 MetI-like superfamily CDA09_08040 IPR003593 AAA+ ATPase domain CDA09_08040 IPR003439 ABC transporter-like CDA09_08040 IPR017871 ABC transporter, conserved site CDA09_08040 IPR015850 ABC transporter, phosphate import, PstB CDA09_08040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08040 IPR005670 Phosphate transport system permease protein 1 CDA09_08045 IPR000847 Transcription regulator HTH, LysR CDA09_08045 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08045 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08045 IPR005119 LysR, substrate-binding CDA09_08050 IPR008030 NmrA-like domain CDA09_08050 IPR036291 NAD(P)-binding domain superfamily CDA09_08055 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CDA09_08055 IPR016174 Di-haem cytochrome, transmembrane CDA09_08060 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDA09_08060 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDA09_08060 IPR023480 Uncharacterised protein family UPF0312/YceI CDA09_08120 IPR035069 TTHA1013/TTHA0281-like CDA09_08120 IPR010998 Integrase/recombinase, N-terminal CDA09_08120 IPR002104 Integrase, catalytic domain CDA09_08120 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_08120 IPR013762 Integrase-like, catalytic domain superfamily CDA09_08125 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CDA09_08125 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily CDA09_08125 IPR023045 Molybdenum cofactor biosynthesis C CDA09_08130 IPR011990 Tetratricopeptide-like helical domain superfamily CDA09_08130 IPR030873 Beta-barrel assembly-enhancing protease CDA09_08130 IPR001915 Peptidase M48 CDA09_08135 IPR036868 TusA-like domain superfamily CDA09_08135 IPR001455 TusA-like domain CDA09_08140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_08140 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDA09_08140 IPR002300 Aminoacyl-tRNA synthetase, class Ia CDA09_08140 IPR033705 Valyl tRNA synthetase, anticodon-binding domain CDA09_08140 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CDA09_08140 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CDA09_08140 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CDA09_08140 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CDA09_08140 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CDA09_08140 IPR002303 Valine-tRNA ligase CDA09_08140 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CDA09_08155 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CDA09_08155 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CDA09_08155 IPR023042 Peptidase M17, leucine aminopeptidase CDA09_08155 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CDA09_08160 IPR030922 LPS export ABC transporter permease LptF CDA09_08160 IPR005495 Permease LptG/LptF-related CDA09_08170 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_08170 IPR017938 Riboflavin synthase-like beta-barrel CDA09_08170 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDA09_08170 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDA09_08170 IPR033892 Ferredoxin--NADP reductase, bacteria CDA09_08170 IPR017927 FAD-binding domain, ferredoxin reductase-type CDA09_08170 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDA09_08180 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08180 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08180 IPR030489 Transcription regulator Rrf2-type, conserved site CDA09_08180 IPR000944 Transcription regulator Rrf2-type CDA09_08190 IPR036259 MFS transporter superfamily CDA09_08190 IPR020846 Major facilitator superfamily domain CDA09_08190 IPR011701 Major facilitator superfamily CDA09_08195 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08195 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08195 IPR000847 Transcription regulator HTH, LysR CDA09_08195 IPR005119 LysR, substrate-binding CDA09_08200 IPR006145 Pseudouridine synthase, RsuA/RluA CDA09_08200 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CDA09_08200 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDA09_08205 IPR011017 TRASH domain CDA09_08205 IPR007029 YHS domain CDA09_08205 IPR001757 P-type ATPase CDA09_08205 IPR027256 P-type ATPase, subfamily IB CDA09_08205 IPR023214 HAD superfamily CDA09_08205 IPR012348 Ribonucleotide reductase-like CDA09_08205 IPR036412 HAD-like superfamily CDA09_08205 IPR009078 Ferritin-like superfamily CDA09_08205 IPR008250 P-type ATPase, A domain superfamily CDA09_08205 IPR023298 P-type ATPase, transmembrane domain superfamily CDA09_08205 IPR018303 P-type ATPase, phosphorylation site CDA09_08205 IPR023299 P-type ATPase, cytoplasmic domain N CDA09_08225 IPR021604 Copper resistance protein K CDA09_08225 IPR038644 CopK superfamily CDA09_08245 IPR012784 RNA polymerase-binding transcription factor DksA CDA09_08245 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CDA09_08245 IPR000962 Zinc finger, DksA/TraR C4-type CDA09_08245 IPR037187 DksA, N-terminal domain superfamily CDA09_08255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08255 IPR025669 AAA domain CDA09_08260 IPR003346 Transposase, IS116/IS110/IS902 CDA09_08260 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CDA09_08265 IPR022486 Polyphosphate kinase 2, PA0141 CDA09_08265 IPR022488 Polyphosphate kinase-2-related CDA09_08265 IPR016898 Polyphosphate kinase 2 CDA09_08265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08295 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08295 IPR004839 Aminotransferase, class I/classII CDA09_08295 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_08295 IPR000524 Transcription regulator HTH, GntR CDA09_08295 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_08295 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_08295 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08305 IPR000891 Pyruvate carboxyltransferase CDA09_08305 IPR013785 Aldolase-type TIM barrel CDA09_08305 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CDA09_08305 IPR013477 Homocitrate synthase NifV-like CDA09_08310 IPR004893 Nitrogen fixation protein NifW CDA09_08315 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_08315 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_08320 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_08320 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CDA09_08320 IPR012255 Electron transfer flavoprotein, beta subunit CDA09_08320 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDA09_08320 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CDA09_08325 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal CDA09_08325 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CDA09_08325 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CDA09_08325 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CDA09_08325 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDA09_08325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_08325 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_08330 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_08330 IPR023753 FAD/NAD(P)-binding domain CDA09_08330 IPR039651 Protein FixC-like CDA09_08335 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_08335 IPR012206 Ferredoxin-like, FixX CDA09_08340 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_08340 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_08340 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_08340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08340 IPR010113 Nif-specific regulatory protein CDA09_08340 IPR002197 DNA binding HTH domain, Fis-type CDA09_08340 IPR025944 Sigma-54 interaction domain, conserved site CDA09_08340 IPR009057 Homeobox-like domain superfamily CDA09_08340 IPR003018 GAF domain CDA09_08340 IPR003593 AAA+ ATPase domain CDA09_08340 IPR029016 GAF-like domain superfamily CDA09_08355 IPR034165 FeMo cofactor biosynthesis protein NifB, C-terminal CDA09_08355 IPR005980 Nitrogenase cofactor biosynthesis protein NifB CDA09_08355 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CDA09_08355 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily CDA09_08355 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CDA09_08355 IPR013785 Aldolase-type TIM barrel CDA09_08355 IPR007197 Radical SAM CDA09_08360 IPR007415 Nitrogenase MoFe maturation protein, NifZ CDA09_08365 IPR009727 NifT/FixU CDA09_08365 IPR024044 NifT/FixU barrel-like domain superfamily CDA09_08370 IPR005502 ADP-ribosylation/Crystallin J1 CDA09_08370 IPR036705 ADP-ribosylation/Crystallin J1 superfamily CDA09_08370 IPR013479 ADP-ribosyl-dinitrogen reductase hydrolase CDA09_08375 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08375 IPR005977 Nitrogenase iron protein NifH CDA09_08375 IPR000392 NifH/frxC family CDA09_08375 IPR030655 NifH/chlL conserved site CDA09_08380 IPR000510 Nitrogenase/oxidoreductase, component 1 CDA09_08380 IPR010143 Nitrogenase component 1, alpha chain CDA09_08380 IPR005972 Nitrogenase molybdenum-iron protein alpha chain CDA09_08380 IPR000318 Nitrogenase component 1, conserved site CDA09_08385 IPR000318 Nitrogenase component 1, conserved site CDA09_08385 IPR000510 Nitrogenase/oxidoreductase, component 1 CDA09_08385 IPR005976 Nitrogenase molybdenum-iron protein beta chain CDA09_08385 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal CDA09_08390 IPR000318 Nitrogenase component 1, conserved site CDA09_08390 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE CDA09_08390 IPR000510 Nitrogenase/oxidoreductase, component 1 CDA09_08390 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CDA09_08390 IPR007419 BFD-like [2Fe-2S]-binding domain CDA09_08395 IPR000510 Nitrogenase/oxidoreductase, component 1 CDA09_08395 IPR000318 Nitrogenase component 1, conserved site CDA09_08395 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein CDA09_08400 IPR034169 NifX-like domain CDA09_08400 IPR013480 Nitrogen fixation protein NifX CDA09_08400 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily CDA09_08400 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CDA09_08405 IPR004952 Uncharacterised protein family UPF0460 CDA09_08410 IPR007774 Putative nitrogen fixation protein CDA09_08410 IPR029012 Helix hairpin bin domain superfamily CDA09_08415 IPR014283 Ferredoxin III 4[4Fe-4S], nif-specific CDA09_08415 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_08415 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_08420 IPR006975 NifQ CDA09_08440 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08440 IPR000847 Transcription regulator HTH, LysR CDA09_08440 IPR005119 LysR, substrate-binding CDA09_08440 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08445 IPR017039 Virulence factor BrkB CDA09_08445 IPR023679 Uncharacterised protein family UPF0761, bacterial CDA09_08450 IPR011704 ATPase, dynein-related, AAA domain CDA09_08450 IPR023671 ATPase RavA CDA09_08450 IPR022547 ATPase, RavA, C-terminal CDA09_08450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08450 IPR041538 ATPase RavA-like, AAA lid domain CDA09_08450 IPR003593 AAA+ ATPase domain CDA09_08455 IPR036465 von Willebrand factor A-like domain superfamily CDA09_08455 IPR002035 von Willebrand factor, type A CDA09_08455 IPR023481 Uncharacterised protein family ViaA CDA09_08455 IPR008912 Uncharacterised protein family CoxE-like CDA09_08465 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08465 IPR005119 LysR, substrate-binding CDA09_08465 IPR000847 Transcription regulator HTH, LysR CDA09_08465 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08470 IPR011051 RmlC-like cupin domain superfamily CDA09_08470 IPR013096 Cupin 2, conserved barrel CDA09_08470 IPR014710 RmlC-like jelly roll fold CDA09_08475 IPR011234 Fumarylacetoacetase-like, C-terminal CDA09_08475 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CDA09_08480 IPR002938 FAD-binding domain CDA09_08480 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_08485 IPR010987 Glutathione S-transferase, C-terminal-like CDA09_08485 IPR040079 Glutathione Transferase family CDA09_08485 IPR004045 Glutathione S-transferase, N-terminal CDA09_08485 IPR005955 Glutathione S-transferases, class Zeta CDA09_08485 IPR034330 Glutathione S-transferases, class Zeta , C-terminal CDA09_08485 IPR034333 Glutathione S-transferases, class Zeta , N-terminal CDA09_08485 IPR036249 Thioredoxin-like superfamily CDA09_08485 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_08490 IPR028081 Leucine-binding protein domain CDA09_08490 IPR000709 Leu/Ile/Val-binding protein CDA09_08490 IPR028082 Periplasmic binding protein-like I CDA09_08500 IPR001851 ABC transporter, permease CDA09_08505 IPR003593 AAA+ ATPase domain CDA09_08505 IPR017871 ABC transporter, conserved site CDA09_08505 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_08505 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08505 IPR003439 ABC transporter-like CDA09_08510 IPR003593 AAA+ ATPase domain CDA09_08510 IPR003439 ABC transporter-like CDA09_08510 IPR017871 ABC transporter, conserved site CDA09_08510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08510 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_08535 IPR018060 DNA binding HTH domain, AraC-type CDA09_08535 IPR018062 HTH domain AraC-type, conserved site CDA09_08535 IPR029062 Class I glutamine amidotransferase-like CDA09_08535 IPR002818 DJ-1/PfpI CDA09_08535 IPR009057 Homeobox-like domain superfamily CDA09_08545 IPR024087 Creatininase-like superfamily CDA09_08545 IPR003785 Creatininase/formamide hydrolase CDA09_08545 IPR031034 Creatinine amidohydrolase CDA09_08555 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like CDA09_08555 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily CDA09_08565 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_08565 IPR035906 MetI-like superfamily CDA09_08575 IPR017871 ABC transporter, conserved site CDA09_08575 IPR003439 ABC transporter-like CDA09_08575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08575 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CDA09_08575 IPR003593 AAA+ ATPase domain CDA09_08575 IPR013611 Transport-associated OB, type 2 CDA09_08575 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CDA09_08575 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_08580 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDA09_08580 IPR036005 Creatinase/aminopeptidase-like CDA09_08580 IPR039394 Creatinase, C-terminal CDA09_08580 IPR000587 Creatinase, N-terminal CDA09_08580 IPR000994 Peptidase M24 CDA09_08590 IPR000847 Transcription regulator HTH, LysR CDA09_08590 IPR005119 LysR, substrate-binding CDA09_08590 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08590 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08595 IPR036380 Isochorismatase-like superfamily CDA09_08595 IPR000868 Isochorismatase-like CDA09_08600 IPR008040 Hydantoinaseoxoprolinase, N-terminal CDA09_08600 IPR002821 Hydantoinase A/oxoprolinase CDA09_08605 IPR003692 Hydantoinase B/oxoprolinase CDA09_08610 IPR012681 Nucleobase cation symporter-1, NCS1 CDA09_08610 IPR001248 Purine-cytosine permease CDA09_08610 IPR038271 Purine-cytosine permease superfamily CDA09_08620 IPR036380 Isochorismatase-like superfamily CDA09_08620 IPR000868 Isochorismatase-like CDA09_08625 IPR011701 Major facilitator superfamily CDA09_08625 IPR020846 Major facilitator superfamily domain CDA09_08625 IPR036259 MFS transporter superfamily CDA09_08630 IPR005119 LysR, substrate-binding CDA09_08630 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08630 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08630 IPR000847 Transcription regulator HTH, LysR CDA09_08635 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CDA09_08635 IPR016039 Thiolase-like CDA09_08635 IPR014031 Beta-ketoacyl synthase, C-terminal CDA09_08635 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDA09_08635 IPR014030 Beta-ketoacyl synthase, N-terminal CDA09_08635 IPR018201 Beta-ketoacyl synthase, active site CDA09_08635 IPR000794 Beta-ketoacyl synthase CDA09_08650 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CDA09_08650 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CDA09_08650 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CDA09_08650 IPR029061 Thiamin diphosphate-binding fold CDA09_08650 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CDA09_08650 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CDA09_08650 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit CDA09_08655 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDA09_08655 IPR029061 Thiamin diphosphate-binding fold CDA09_08660 IPR011234 Fumarylacetoacetase-like, C-terminal CDA09_08660 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CDA09_08665 IPR015942 Asp/Glu/hydantoin racemase CDA09_08675 IPR036259 MFS transporter superfamily CDA09_08675 IPR020846 Major facilitator superfamily domain CDA09_08675 IPR000849 Sugar phosphate transporter CDA09_08675 IPR011701 Major facilitator superfamily CDA09_08690 IPR006680 Amidohydrolase-related CDA09_08690 IPR011778 Hydantoinase/dihydropyrimidinase CDA09_08690 IPR011059 Metal-dependent hydrolase, composite domain superfamily CDA09_08690 IPR032466 Metal-dependent hydrolase CDA09_08695 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CDA09_08695 IPR037396 FMN hydroxy acid dehydrogenase domain CDA09_08695 IPR000262 FMN-dependent dehydrogenase CDA09_08695 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CDA09_08695 IPR013785 Aldolase-type TIM barrel CDA09_08705 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CDA09_08705 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDA09_08705 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08705 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_08705 IPR028619 ATP-dependent RNA helicase DbpA CDA09_08705 IPR011545 DEAD/DEAH box helicase domain CDA09_08705 IPR014014 RNA helicase, DEAD-box type, Q motif CDA09_08705 IPR001650 Helicase, C-terminal CDA09_08705 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CDA09_08710 IPR002725 Protein of unknown function DUF45 CDA09_08715 IPR001672 Phosphoglucose isomerase (PGI) CDA09_08715 IPR035482 Phosphoglucose isomerase, SIS domain 2 CDA09_08715 IPR035476 Phosphoglucose isomerase, SIS domain 1 CDA09_08715 IPR018189 Phosphoglucose isomerase, conserved site CDA09_08715 IPR023096 Phosphoglucose isomerase, C-terminal CDA09_08720 IPR005944 Proline iminopeptidase CDA09_08720 IPR002410 Peptidase S33 CDA09_08720 IPR000073 Alpha/beta hydrolase fold-1 CDA09_08720 IPR029058 Alpha/Beta hydrolase fold CDA09_08725 IPR038644 CopK superfamily CDA09_08725 IPR021604 Copper resistance protein K CDA09_08735 IPR011725 Coenzyme PQQ biosynthesis protein A CDA09_08740 IPR001279 Metallo-beta-lactamase CDA09_08740 IPR011842 Coenzyme PQQ biosynthesis protein B CDA09_08740 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_08745 IPR039068 Pyrroloquinoline-quinone synthase-like CDA09_08745 IPR004305 Thiaminase-2/PQQC CDA09_08745 IPR016084 Haem oxygenase-like, multi-helical CDA09_08745 IPR011845 Coenzyme PQQ biosynthesis protein C CDA09_08750 IPR041881 Coenzyme PQQ synthesis protein D superfamily CDA09_08750 IPR022479 Coenzyme PQQ synthesis D, bacteria CDA09_08750 IPR008792 Coenzyme PQQ synthesis protein D CDA09_08755 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CDA09_08755 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria CDA09_08755 IPR006638 Elp3/MiaB/NifB CDA09_08755 IPR023885 4Fe4S-binding SPASM domain CDA09_08755 IPR013785 Aldolase-type TIM barrel CDA09_08755 IPR007197 Radical SAM CDA09_08755 IPR017200 Coenzyme PQQ synthesis protein E CDA09_08765 IPR036249 Thioredoxin-like superfamily CDA09_08765 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_08765 IPR004045 Glutathione S-transferase, N-terminal CDA09_08765 IPR016639 Glutathione S-transferase Omega/GSH CDA09_08765 IPR010987 Glutathione S-transferase, C-terminal-like CDA09_08770 IPR032808 DoxX family CDA09_08775 IPR029058 Alpha/Beta hydrolase fold CDA09_08775 IPR003140 Phospholipase/carboxylesterase/thioesterase CDA09_08785 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_08785 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_08785 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_08785 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_08785 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_08785 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_08785 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_08790 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_08790 IPR002155 Thiolase CDA09_08790 IPR020617 Thiolase, C-terminal CDA09_08790 IPR020613 Thiolase, conserved site CDA09_08790 IPR020616 Thiolase, N-terminal CDA09_08790 IPR016039 Thiolase-like CDA09_08790 IPR020610 Thiolase, active site CDA09_08790 IPR012793 Beta-ketoadipyl CoA thiolase CDA09_08795 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_08795 IPR020845 AMP-binding, conserved site CDA09_08795 IPR000873 AMP-dependent synthetase/ligase CDA09_08795 IPR042099 AMP-dependent synthetase-like superfamily CDA09_08805 IPR013785 Aldolase-type TIM barrel CDA09_08805 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDA09_08820 IPR002938 FAD-binding domain CDA09_08820 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase CDA09_08820 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_08840 IPR000873 AMP-dependent synthetase/ligase CDA09_08840 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_08840 IPR020845 AMP-binding, conserved site CDA09_08840 IPR042099 AMP-dependent synthetase-like superfamily CDA09_08840 IPR005914 Acetoacetyl-CoA synthase CDA09_08845 IPR003836 Glucokinase CDA09_08855 IPR003607 HD/PDEase domain CDA09_08855 IPR011006 CheY-like superfamily CDA09_08855 IPR001789 Signal transduction response regulator, receiver domain CDA09_08855 IPR037522 HD-GYP domain CDA09_08860 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08860 IPR018490 Cyclic nucleotide-binding-like CDA09_08860 IPR012318 Crp-type HTH domain CDA09_08860 IPR000595 Cyclic nucleotide-binding domain CDA09_08860 IPR036390 Winged helix DNA-binding domain superfamily CDA09_08860 IPR018335 Transcription regulator HTH, Crp-type, conserved site CDA09_08860 IPR014710 RmlC-like jelly roll fold CDA09_08865 IPR036465 von Willebrand factor A-like domain superfamily CDA09_08865 IPR002035 von Willebrand factor, type A CDA09_08880 IPR013615 CbbQ/NirQ/NorQ, C-terminal CDA09_08880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_08880 IPR011704 ATPase, dynein-related, AAA domain CDA09_08890 IPR024791 Cytochrome c oxidase subunit III CDA09_08890 IPR000298 Cytochrome c oxidase subunit III-like CDA09_08890 IPR035973 Cytochrome c oxidase subunit III-like superfamily CDA09_08890 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CDA09_08895 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CDA09_08895 IPR000883 Cytochrome c oxidase subunit I CDA09_08895 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CDA09_08895 IPR023616 Cytochrome c oxidase-like, subunit I domain CDA09_08900 IPR009056 Cytochrome c-like domain CDA09_08900 IPR036909 Cytochrome c-like domain superfamily CDA09_08930 IPR011904 Acetate-CoA ligase CDA09_08930 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain CDA09_08930 IPR020845 AMP-binding, conserved site CDA09_08930 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_08930 IPR042099 AMP-dependent synthetase-like superfamily CDA09_08930 IPR000873 AMP-dependent synthetase/ligase CDA09_08940 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_08940 IPR013767 PAS fold CDA09_08940 IPR003660 HAMP domain CDA09_08940 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_08940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_08940 IPR041328 ResE, histidine kinase sensor domain CDA09_08940 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_08940 IPR005467 Histidine kinase domain CDA09_08940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_08940 IPR035965 PAS domain superfamily CDA09_08940 IPR000014 PAS domain CDA09_08945 IPR011006 CheY-like superfamily CDA09_08945 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_08945 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_08945 IPR001789 Signal transduction response regulator, receiver domain CDA09_08945 IPR039420 Transcriptional regulatory protein WalR-like CDA09_08945 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_08950 IPR035965 PAS domain superfamily CDA09_08950 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CDA09_08950 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_08950 IPR000014 PAS domain CDA09_08950 IPR012337 Ribonuclease H-like superfamily CDA09_08950 IPR036397 Ribonuclease H superfamily CDA09_08955 IPR001734 Sodium/solute symporter CDA09_08955 IPR038377 Sodium/glucose symporter superfamily CDA09_08955 IPR019899 Sodium/solute symporter, VC2705 subfamily CDA09_09000 IPR017839 DMSO reductase family, type II, iron-sulphur subunit CDA09_09000 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_09005 IPR017840 DMSO reductase family, type II, molybdopterin subunit CDA09_09005 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_09005 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CDA09_09005 IPR037943 Nitrate reductase alpha subunit-like, MopB domain CDA09_09005 IPR006311 Twin-arginine translocation pathway, signal sequence CDA09_09005 IPR006657 Molybdopterin dinucleotide-binding domain CDA09_09005 IPR006656 Molybdopterin oxidoreductase CDA09_09005 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDA09_09025 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_09025 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_09025 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_09025 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_09025 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_09025 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_09045 IPR036259 MFS transporter superfamily CDA09_09045 IPR004638 Drug resistance transporter EmrB-like CDA09_09045 IPR011701 Major facilitator superfamily CDA09_09045 IPR020846 Major facilitator superfamily domain CDA09_09050 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_09050 IPR036291 NAD(P)-binding domain superfamily CDA09_09050 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_09050 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09070 IPR003673 CoA-transferase family III CDA09_09070 IPR023606 CoA-transferase family III domain superfamily CDA09_09090 IPR010752 Protein of unknown function DUF1329 CDA09_09115 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDA09_09115 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_09115 IPR015590 Aldehyde dehydrogenase domain CDA09_09115 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_09115 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_09120 IPR014183 Alcohol dehydrogenase class III CDA09_09120 IPR020843 Polyketide synthase, enoylreductase domain CDA09_09120 IPR036291 NAD(P)-binding domain superfamily CDA09_09120 IPR011032 GroES-like superfamily CDA09_09120 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDA09_09120 IPR013154 Alcohol dehydrogenase, N-terminal CDA09_09120 IPR013149 Alcohol dehydrogenase, C-terminal CDA09_09125 IPR006015 Universal stress protein A family CDA09_09125 IPR006016 UspA CDA09_09135 IPR017972 Cytochrome P450, conserved site CDA09_09135 IPR036396 Cytochrome P450 superfamily CDA09_09135 IPR002397 Cytochrome P450, B-class CDA09_09135 IPR001128 Cytochrome P450 CDA09_09140 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_09140 IPR012675 Beta-grasp domain superfamily CDA09_09140 IPR000951 Phthalate dioxygenase reductase CDA09_09140 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDA09_09140 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_09140 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_09140 IPR017927 FAD-binding domain, ferredoxin reductase-type CDA09_09140 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_09140 IPR017938 Riboflavin synthase-like beta-barrel CDA09_09145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_09145 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CDA09_09145 IPR012255 Electron transfer flavoprotein, beta subunit CDA09_09145 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDA09_09145 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CDA09_09150 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CDA09_09150 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CDA09_09150 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal CDA09_09150 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_09150 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CDA09_09150 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDA09_09150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_09165 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC CDA09_09165 IPR042099 AMP-dependent synthetase-like superfamily CDA09_09165 IPR000873 AMP-dependent synthetase/ligase CDA09_09165 IPR020845 AMP-binding, conserved site CDA09_09165 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_09170 IPR003673 CoA-transferase family III CDA09_09170 IPR023606 CoA-transferase family III domain superfamily CDA09_09180 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09180 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_09180 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_09180 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_09185 IPR003673 CoA-transferase family III CDA09_09185 IPR023606 CoA-transferase family III domain superfamily CDA09_09190 IPR037171 NagB/RpiA transferase-like CDA09_09190 IPR004165 Coenzyme A transferase family I CDA09_09195 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_09195 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_09195 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_09195 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_09195 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_09195 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_09195 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_09200 IPR037171 NagB/RpiA transferase-like CDA09_09200 IPR004165 Coenzyme A transferase family I CDA09_09205 IPR000873 AMP-dependent synthetase/ligase CDA09_09205 IPR020845 AMP-binding, conserved site CDA09_09205 IPR042099 AMP-dependent synthetase-like superfamily CDA09_09205 IPR010192 2-succinylbenzoate--CoA ligase CDA09_09205 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_09210 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_09210 IPR011711 GntR, C-terminal CDA09_09210 IPR000524 Transcription regulator HTH, GntR CDA09_09210 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_09210 IPR036390 Winged helix DNA-binding domain superfamily CDA09_09215 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_09215 IPR020845 AMP-binding, conserved site CDA09_09215 IPR000873 AMP-dependent synthetase/ligase CDA09_09215 IPR042099 AMP-dependent synthetase-like superfamily CDA09_09215 IPR020459 AMP-binding CDA09_09220 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_09220 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_09220 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_09220 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_09220 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_09220 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_09220 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_09225 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_09225 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_09225 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_09225 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_09225 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_09225 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_09230 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_09230 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09230 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_09230 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_09235 IPR036390 Winged helix DNA-binding domain superfamily CDA09_09235 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_09235 IPR000524 Transcription regulator HTH, GntR CDA09_09235 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_09235 IPR011711 GntR, C-terminal CDA09_09255 IPR036291 NAD(P)-binding domain superfamily CDA09_09255 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_09255 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09270 IPR036291 NAD(P)-binding domain superfamily CDA09_09270 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_09270 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09270 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_09275 IPR023753 FAD/NAD(P)-binding domain CDA09_09275 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDA09_09275 IPR013785 Aldolase-type TIM barrel CDA09_09275 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09280 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09280 IPR036291 NAD(P)-binding domain superfamily CDA09_09290 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_09290 IPR011006 CheY-like superfamily CDA09_09290 IPR001789 Signal transduction response regulator, receiver domain CDA09_09290 IPR000792 Transcription regulator LuxR, C-terminal CDA09_09290 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_09320 IPR008878 Transposase IS66, Orf2 CDA09_09325 IPR039552 Transposase IS66, C-terminal CDA09_09325 IPR004291 Transposase, IS66 CDA09_09325 IPR024474 Zinc-finger binding domain of transposase IS66 CDA09_09325 IPR024463 Transposase TnpC, homeodomain CDA09_09360 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CDA09_09360 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CDA09_09360 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger CDA09_09370 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CDA09_09370 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09370 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CDA09_09375 IPR000873 AMP-dependent synthetase/ligase CDA09_09375 IPR042099 AMP-dependent synthetase-like superfamily CDA09_09375 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_09375 IPR020845 AMP-binding, conserved site CDA09_09380 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_09380 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_09380 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_09380 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09385 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09385 IPR036291 NAD(P)-binding domain superfamily CDA09_09395 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_09395 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_09395 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_09395 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_09395 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_09410 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_09410 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_09410 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_09410 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_09410 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_09410 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_09425 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09425 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_09425 IPR036291 NAD(P)-binding domain superfamily CDA09_09425 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_09450 IPR023661 Coenzyme F420:L-glutamate ligase, Actinobacteria CDA09_09450 IPR019943 Coenzyme F420 biosynthesis protein FbiB, C-terminal CDA09_09450 IPR002847 Coenzyme F420:L-glutamate ligase-like domain CDA09_09450 IPR008225 Coenzyme F420:L-glutamate ligase CDA09_09450 IPR000415 Nitroreductase-like CDA09_09450 IPR029479 Nitroreductase CDA09_09455 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09455 IPR023753 FAD/NAD(P)-binding domain CDA09_09455 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDA09_09455 IPR013785 Aldolase-type TIM barrel CDA09_09460 IPR029058 Alpha/Beta hydrolase fold CDA09_09460 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase CDA09_09460 IPR000073 Alpha/beta hydrolase fold-1 CDA09_09460 IPR000639 Epoxide hydrolase-like CDA09_09465 IPR000120 Amidase CDA09_09465 IPR036928 Amidase signature (AS) superfamily CDA09_09465 IPR023631 Amidase signature domain CDA09_09465 IPR020556 Amidase, conserved site CDA09_09470 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_09470 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_09470 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09470 IPR036291 NAD(P)-binding domain superfamily CDA09_09475 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_09475 IPR036291 NAD(P)-binding domain superfamily CDA09_09475 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_09475 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09485 IPR016039 Thiolase-like CDA09_09485 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_09485 IPR020610 Thiolase, active site CDA09_09485 IPR020617 Thiolase, C-terminal CDA09_09485 IPR020613 Thiolase, conserved site CDA09_09485 IPR020616 Thiolase, N-terminal CDA09_09485 IPR002155 Thiolase CDA09_09490 IPR010752 Protein of unknown function DUF1329 CDA09_09500 IPR000873 AMP-dependent synthetase/ligase CDA09_09500 IPR020845 AMP-binding, conserved site CDA09_09500 IPR042099 AMP-dependent synthetase-like superfamily CDA09_09500 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_09505 IPR023606 CoA-transferase family III domain superfamily CDA09_09505 IPR003673 CoA-transferase family III CDA09_09510 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_09510 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_09510 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_09510 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_09510 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_09510 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_09520 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDA09_09520 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDA09_09520 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_09520 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09520 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_09520 IPR012802 Fatty oxidation complex, alpha subunit FadJ CDA09_09520 IPR036291 NAD(P)-binding domain superfamily CDA09_09525 IPR020617 Thiolase, C-terminal CDA09_09525 IPR020610 Thiolase, active site CDA09_09525 IPR020616 Thiolase, N-terminal CDA09_09525 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_09525 IPR016039 Thiolase-like CDA09_09525 IPR002155 Thiolase CDA09_09525 IPR020613 Thiolase, conserved site CDA09_09530 IPR009057 Homeobox-like domain superfamily CDA09_09530 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_09530 IPR001647 DNA-binding HTH domain, TetR-type CDA09_09530 IPR023769 Nucleoid occlusion factor SlmA CDA09_09535 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal CDA09_09535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_09535 IPR006935 Helicase/UvrB, N-terminal CDA09_09535 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_09535 IPR013670 EcoEI R protein C-terminal domain CDA09_09535 IPR001650 Helicase, C-terminal CDA09_09550 IPR000055 Restriction endonuclease, type I, HsdS CDA09_09560 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDA09_09560 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CDA09_09560 IPR003356 DNA methylase, adenine-specific CDA09_09560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_09560 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CDA09_09575 IPR036291 NAD(P)-binding domain superfamily CDA09_09575 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09580 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_09580 IPR001647 DNA-binding HTH domain, TetR-type CDA09_09580 IPR009057 Homeobox-like domain superfamily CDA09_09580 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_09580 IPR039538 BetI-type transcriptional repressor, C-terminal CDA09_09580 IPR017757 Transcriptional repressor BetI CDA09_09585 IPR000873 AMP-dependent synthetase/ligase CDA09_09585 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_09585 IPR020845 AMP-binding, conserved site CDA09_09585 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 CDA09_09585 IPR042099 AMP-dependent synthetase-like superfamily CDA09_09605 IPR039375 Nodulation protein N-like CDA09_09605 IPR029069 HotDog domain superfamily CDA09_09605 IPR002539 MaoC-like dehydratase domain CDA09_09620 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_09620 IPR037523 Vicinal oxygen chelate (VOC) domain CDA09_09620 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_09620 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II CDA09_09625 IPR004165 Coenzyme A transferase family I CDA09_09625 IPR037171 NagB/RpiA transferase-like CDA09_09630 IPR004165 Coenzyme A transferase family I CDA09_09630 IPR037171 NagB/RpiA transferase-like CDA09_09635 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09635 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_09640 IPR013785 Aldolase-type TIM barrel CDA09_09640 IPR004136 Nitronate monooxygenase CDA09_09645 IPR022852 Carnitinyl-CoA dehydratase CDA09_09645 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09645 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_09645 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_09645 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_09650 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_09650 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_09650 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_09650 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_09650 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_09650 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_09655 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_09655 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_09655 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_09655 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_09655 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_09655 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_09655 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_09660 IPR020613 Thiolase, conserved site CDA09_09660 IPR020617 Thiolase, C-terminal CDA09_09660 IPR016039 Thiolase-like CDA09_09660 IPR002155 Thiolase CDA09_09660 IPR020616 Thiolase, N-terminal CDA09_09665 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09665 IPR036291 NAD(P)-binding domain superfamily CDA09_09665 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_09670 IPR020845 AMP-binding, conserved site CDA09_09670 IPR042099 AMP-dependent synthetase-like superfamily CDA09_09670 IPR000873 AMP-dependent synthetase/ligase CDA09_09670 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_09675 IPR017782 Hydroxyacylglutathione hydrolase CDA09_09675 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_09675 IPR001279 Metallo-beta-lactamase CDA09_09675 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CDA09_09675 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CDA09_09695 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_09695 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CDA09_09695 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_09695 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_09695 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_09700 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09700 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_09700 IPR036291 NAD(P)-binding domain superfamily CDA09_09705 IPR017938 Riboflavin synthase-like beta-barrel CDA09_09705 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDA09_09705 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_09705 IPR017927 FAD-binding domain, ferredoxin reductase-type CDA09_09705 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_09705 IPR012675 Beta-grasp domain superfamily CDA09_09705 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_09705 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_09705 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDA09_09705 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDA09_09710 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDA09_09710 IPR012255 Electron transfer flavoprotein, beta subunit CDA09_09710 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CDA09_09710 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CDA09_09710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_09715 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CDA09_09715 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDA09_09715 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_09715 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CDA09_09715 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal CDA09_09715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_09715 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CDA09_09725 IPR036291 NAD(P)-binding domain superfamily CDA09_09725 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_09725 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09730 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09730 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_09730 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase CDA09_09735 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_09735 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09735 IPR017613 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase CDA09_09745 IPR010752 Protein of unknown function DUF1329 CDA09_09750 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDA09_09750 IPR023753 FAD/NAD(P)-binding domain CDA09_09750 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09750 IPR013785 Aldolase-type TIM barrel CDA09_09755 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CDA09_09755 IPR012286 Tetrahaem cytochrome domain CDA09_09755 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CDA09_09755 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_09755 IPR011031 Multihaem cytochrome CDA09_09755 IPR010960 Flavocytochrome c CDA09_09755 IPR036280 Multiheme cytochrome superfamily CDA09_09770 IPR014056 Addiction module killer protein, predicted CDA09_09770 IPR009241 Toxin HigB-like CDA09_09775 IPR001387 Cro/C1-type helix-turn-helix domain CDA09_09775 IPR014057 Uncharacterized protein HI1420 CDA09_09775 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CDA09_09780 IPR011701 Major facilitator superfamily CDA09_09780 IPR020846 Major facilitator superfamily domain CDA09_09780 IPR036259 MFS transporter superfamily CDA09_09785 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDA09_09785 IPR013785 Aldolase-type TIM barrel CDA09_09795 IPR036291 NAD(P)-binding domain superfamily CDA09_09795 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_09795 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09800 IPR036291 NAD(P)-binding domain superfamily CDA09_09800 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_09800 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09800 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_09805 IPR018060 DNA binding HTH domain, AraC-type CDA09_09805 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDA09_09805 IPR009057 Homeobox-like domain superfamily CDA09_09805 IPR020449 Transcription regulator HTH, AraC- type CDA09_09810 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family CDA09_09810 IPR027051 XdhC Rossmann domain CDA09_09810 IPR003777 XdhC- CoxI CDA09_09820 IPR003593 AAA+ ATPase domain CDA09_09820 IPR032781 ABC-transporter extension domain CDA09_09820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_09820 IPR017871 ABC transporter, conserved site CDA09_09820 IPR003439 ABC transporter-like CDA09_09830 IPR020050 FO synthase, subunit 2 CDA09_09830 IPR007197 Radical SAM CDA09_09830 IPR019939 CofG family CDA09_09830 IPR006638 Elp3/MiaB/NifB CDA09_09830 IPR019940 CofH family CDA09_09830 IPR013785 Aldolase-type TIM barrel CDA09_09830 IPR034405 F420, menaquinone cofactor biosynthesis CDA09_09850 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_09850 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_09850 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_09850 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_09850 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_09850 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_09850 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_09855 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_09855 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_09855 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_09855 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_09855 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_09855 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_09860 IPR011251 Luciferase-like domain CDA09_09860 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted CDA09_09860 IPR036661 Luciferase-like domain superfamily CDA09_09865 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_09865 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_09865 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_09865 IPR029045 ClpP/crotonase-like domain superfamily CDA09_09870 IPR007569 Protein of unknown function DUF559 CDA09_09870 IPR011335 Restriction endonuclease type II-like CDA09_09880 IPR003673 CoA-transferase family III CDA09_09880 IPR023606 CoA-transferase family III domain superfamily CDA09_09885 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_09885 IPR000873 AMP-dependent synthetase/ligase CDA09_09885 IPR042099 AMP-dependent synthetase-like superfamily CDA09_09885 IPR010192 2-succinylbenzoate--CoA ligase CDA09_09885 IPR020845 AMP-binding, conserved site CDA09_09895 IPR003673 CoA-transferase family III CDA09_09895 IPR023606 CoA-transferase family III domain superfamily CDA09_09900 IPR013785 Aldolase-type TIM barrel CDA09_09900 IPR004136 Nitronate monooxygenase CDA09_09910 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDA09_09910 IPR012255 Electron transfer flavoprotein, beta subunit CDA09_09910 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CDA09_09910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_09910 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CDA09_09925 IPR003812 Fido domain CDA09_09925 IPR036597 Fido-like domain superfamily CDA09_09925 IPR040198 Fido domain-containing protein CDA09_09925 IPR025758 Fic/DOC N-terminal CDA09_09925 IPR026287 Protein adenylyltransferase SoFic-like CDA09_09935 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_09935 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CDA09_09935 IPR015590 Aldehyde dehydrogenase domain CDA09_09935 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_09935 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_09935 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDA09_09940 IPR012709 2-methyl-aconitate isomerase PrpF CDA09_09940 IPR007400 PrpF protein CDA09_09945 IPR036390 Winged helix DNA-binding domain superfamily CDA09_09945 IPR002563 Flavin reductase like domain CDA09_09945 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_09945 IPR012349 FMN-binding split barrel CDA09_09950 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_09950 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_09950 IPR036291 NAD(P)-binding domain superfamily CDA09_09955 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CDA09_09955 IPR011234 Fumarylacetoacetase-like, C-terminal CDA09_09960 IPR000534 Semialdehyde dehydrogenase, NAD-binding CDA09_09960 IPR036291 NAD(P)-binding domain superfamily CDA09_09960 IPR015426 Acetaldehyde dehydrogenase, C-terminal CDA09_09960 IPR003361 Acetaldehyde dehydrogenase CDA09_09965 IPR017629 4-hydroxy-2-oxovalerate aldolase CDA09_09965 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain CDA09_09965 IPR012425 DmpG-like communication CDA09_09965 IPR013785 Aldolase-type TIM barrel CDA09_09965 IPR000891 Pyruvate carboxyltransferase CDA09_09970 IPR011701 Major facilitator superfamily CDA09_09970 IPR004638 Drug resistance transporter EmrB-like CDA09_09970 IPR036259 MFS transporter superfamily CDA09_09970 IPR020846 Major facilitator superfamily domain CDA09_09975 IPR003673 CoA-transferase family III CDA09_09975 IPR023606 CoA-transferase family III domain superfamily CDA09_09980 IPR003673 CoA-transferase family III CDA09_09980 IPR023606 CoA-transferase family III domain superfamily CDA09_09985 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_09985 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_09985 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_09985 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB CDA09_09985 IPR029045 ClpP/crotonase-like domain superfamily CDA09_10000 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_10000 IPR029045 ClpP/crotonase-like domain superfamily CDA09_10000 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_10000 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_10015 IPR036259 MFS transporter superfamily CDA09_10015 IPR020846 Major facilitator superfamily domain CDA09_10015 IPR011701 Major facilitator superfamily CDA09_10025 IPR013785 Aldolase-type TIM barrel CDA09_10025 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_10025 IPR023753 FAD/NAD(P)-binding domain CDA09_10025 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDA09_10030 IPR003673 CoA-transferase family III CDA09_10030 IPR023606 CoA-transferase family III domain superfamily CDA09_10035 IPR023606 CoA-transferase family III domain superfamily CDA09_10035 IPR003673 CoA-transferase family III CDA09_10040 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CDA09_10040 IPR012780 Carbon-monoxide dehydrogenase, large subunit CDA09_10040 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDA09_10040 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CDA09_10040 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDA09_10045 IPR036884 [2Fe-2S]-binding domain superfamily CDA09_10045 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_10045 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_10045 IPR012675 Beta-grasp domain superfamily CDA09_10045 IPR002888 [2Fe-2S]-binding CDA09_10045 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_10050 IPR016167 FAD-binding, type PCMH, subdomain 1 CDA09_10050 IPR002346 Molybdopterin dehydrogenase, FAD-binding CDA09_10050 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily CDA09_10050 IPR016166 FAD-binding domain, PCMH-type CDA09_10050 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_10050 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDA09_10050 IPR036318 FAD-binding, type PCMH-like superfamily CDA09_10060 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB CDA09_10060 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_10060 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_10060 IPR029045 ClpP/crotonase-like domain superfamily CDA09_10065 IPR011251 Luciferase-like domain CDA09_10065 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG CDA09_10065 IPR036661 Luciferase-like domain superfamily CDA09_10070 IPR003673 CoA-transferase family III CDA09_10070 IPR017659 Formyl-CoA:oxalate CoA-transferase CDA09_10070 IPR023606 CoA-transferase family III domain superfamily CDA09_10075 IPR003673 CoA-transferase family III CDA09_10075 IPR023606 CoA-transferase family III domain superfamily CDA09_10100 IPR023606 CoA-transferase family III domain superfamily CDA09_10100 IPR003673 CoA-transferase family III CDA09_10105 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_10105 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_10105 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_10105 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_10105 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_10105 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_10110 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal CDA09_10110 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_10110 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CDA09_10110 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CDA09_10110 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CDA09_10110 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_10110 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDA09_10120 IPR016039 Thiolase-like CDA09_10120 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CDA09_10120 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDA09_10120 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CDA09_10125 IPR036197 NarG-like superfamily CDA09_10125 IPR023234 NarG-like domain CDA09_10125 IPR009051 Alpha-helical ferredoxin CDA09_10125 IPR004017 Cysteine-rich domain CDA09_10125 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_10125 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_10145 IPR001789 Signal transduction response regulator, receiver domain CDA09_10145 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDA09_10145 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_10145 IPR036641 HPT domain superfamily CDA09_10145 IPR005467 Histidine kinase domain CDA09_10145 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10145 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10145 IPR011006 CheY-like superfamily CDA09_10145 IPR002545 CheW-like domain CDA09_10145 IPR036061 CheW-like domain superfamily CDA09_10155 IPR011006 CheY-like superfamily CDA09_10155 IPR001789 Signal transduction response regulator, receiver domain CDA09_10160 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDA09_10160 IPR004090 Chemotaxis methyl-accepting receptor CDA09_10160 IPR003660 HAMP domain CDA09_10160 IPR007891 CHASE3 CDA09_10170 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS CDA09_10170 IPR024370 PBP domain CDA09_10175 IPR011864 Phosphate ABC transporter, permease protein PstC CDA09_10175 IPR035906 MetI-like superfamily CDA09_10175 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_10180 IPR035906 MetI-like superfamily CDA09_10180 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_10180 IPR005672 Phosphate transport system permease protein PstA CDA09_10185 IPR005670 Phosphate transport system permease protein 1 CDA09_10185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10185 IPR015850 ABC transporter, phosphate import, PstB CDA09_10185 IPR017871 ABC transporter, conserved site CDA09_10185 IPR003439 ABC transporter-like CDA09_10185 IPR003593 AAA+ ATPase domain CDA09_10190 IPR029787 Nucleotide cyclase CDA09_10190 IPR000160 GGDEF domain CDA09_10190 IPR005330 MHYT domain CDA09_10190 IPR001633 EAL domain CDA09_10190 IPR035919 EAL domain superfamily CDA09_10195 IPR003430 Methane/phenol/toluene hydroxylase CDA09_10195 IPR012348 Ribonucleotide reductase-like CDA09_10195 IPR009078 Ferritin-like superfamily CDA09_10200 IPR009355 Toluene-4-monooxygenase system B CDA09_10200 IPR036713 TmoB-like superfamily CDA09_10205 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDA09_10205 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CDA09_10210 IPR036889 Monooxygenase component MmoB/DmpM superfamily CDA09_10210 IPR003454 Monooxygenase component MmoB/DmpM CDA09_10215 IPR012078 Methane/phenol monooxygenase, hydroxylase component CDA09_10215 IPR012348 Ribonucleotide reductase-like CDA09_10215 IPR003430 Methane/phenol/toluene hydroxylase CDA09_10215 IPR009078 Ferritin-like superfamily CDA09_10220 IPR017938 Riboflavin synthase-like beta-barrel CDA09_10220 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDA09_10220 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10220 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDA09_10220 IPR012675 Beta-grasp domain superfamily CDA09_10220 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_10220 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_10220 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_10220 IPR017927 FAD-binding domain, ferredoxin reductase-type CDA09_10230 IPR011006 CheY-like superfamily CDA09_10230 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_10230 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10230 IPR001789 Signal transduction response regulator, receiver domain CDA09_10230 IPR005467 Histidine kinase domain CDA09_10230 IPR013656 PAS fold-4 CDA09_10230 IPR035965 PAS domain superfamily CDA09_10230 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10230 IPR000700 PAS-associated, C-terminal CDA09_10230 IPR000014 PAS domain CDA09_10230 IPR001610 PAC motif CDA09_10230 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_10230 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_10235 IPR001789 Signal transduction response regulator, receiver domain CDA09_10235 IPR011006 CheY-like superfamily CDA09_10235 IPR000792 Transcription regulator LuxR, C-terminal CDA09_10235 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10240 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_10240 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_10240 IPR004096 4-vinyl reductase, 4VR CDA09_10240 IPR010523 Activator of aromatic catabolism CDA09_10240 IPR025944 Sigma-54 interaction domain, conserved site CDA09_10240 IPR003593 AAA+ ATPase domain CDA09_10240 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10240 IPR002197 DNA binding HTH domain, Fis-type CDA09_10240 IPR009057 Homeobox-like domain superfamily CDA09_10240 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_10240 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CDA09_10245 IPR012675 Beta-grasp domain superfamily CDA09_10245 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_10245 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_10245 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_10250 IPR010353 Phenol hydroxylase subunit CDA09_10255 IPR012078 Methane/phenol monooxygenase, hydroxylase component CDA09_10255 IPR009078 Ferritin-like superfamily CDA09_10255 IPR003430 Methane/phenol/toluene hydroxylase CDA09_10255 IPR012348 Ribonucleotide reductase-like CDA09_10260 IPR036889 Monooxygenase component MmoB/DmpM superfamily CDA09_10260 IPR003454 Monooxygenase component MmoB/DmpM CDA09_10265 IPR009078 Ferritin-like superfamily CDA09_10265 IPR003430 Methane/phenol/toluene hydroxylase CDA09_10265 IPR012348 Ribonucleotide reductase-like CDA09_10265 IPR007029 YHS domain CDA09_10270 IPR006756 Phenol hydroxylase CDA09_10275 IPR012675 Beta-grasp domain superfamily CDA09_10275 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_10275 IPR017938 Riboflavin synthase-like beta-barrel CDA09_10275 IPR017927 FAD-binding domain, ferredoxin reductase-type CDA09_10275 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10275 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDA09_10275 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_10275 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_10275 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDA09_10280 IPR037523 Vicinal oxygen chelate (VOC) domain CDA09_10280 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_10280 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_10280 IPR017624 Catechol 2,3 dioxygenase CDA09_10280 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II CDA09_10285 IPR017850 Alkaline-phosphatase-like, core domain superfamily CDA09_10285 IPR000917 Sulfatase, N-terminal CDA09_10285 IPR024607 Sulfatase, conserved site CDA09_10310 IPR005624 Haem-degrading CDA09_10310 IPR038084 GlcG-like domain superfamily CDA09_10315 IPR015590 Aldehyde dehydrogenase domain CDA09_10315 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_10315 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_10315 IPR016160 Aldehyde dehydrogenase, cysteine active site CDA09_10315 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_10315 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDA09_10315 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase CDA09_10320 IPR000073 Alpha/beta hydrolase fold-1 CDA09_10320 IPR029058 Alpha/Beta hydrolase fold CDA09_10320 IPR000639 Epoxide hydrolase-like CDA09_10325 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CDA09_10330 IPR003361 Acetaldehyde dehydrogenase CDA09_10330 IPR015426 Acetaldehyde dehydrogenase, C-terminal CDA09_10330 IPR036291 NAD(P)-binding domain superfamily CDA09_10330 IPR000534 Semialdehyde dehydrogenase, NAD-binding CDA09_10335 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain CDA09_10335 IPR017629 4-hydroxy-2-oxovalerate aldolase CDA09_10335 IPR013785 Aldolase-type TIM barrel CDA09_10335 IPR012425 DmpG-like communication CDA09_10335 IPR000891 Pyruvate carboxyltransferase CDA09_10340 IPR017630 4-oxalocrotonate decarboxylase CDA09_10340 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CDA09_10345 IPR014347 Tautomerase/MIF superfamily CDA09_10345 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type CDA09_10345 IPR004370 4-oxalocrotonate tautomerase CDA09_10350 IPR036390 Winged helix DNA-binding domain superfamily CDA09_10350 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10350 IPR000847 Transcription regulator HTH, LysR CDA09_10350 IPR005119 LysR, substrate-binding CDA09_10360 IPR003593 AAA+ ATPase domain CDA09_10360 IPR025944 Sigma-54 interaction domain, conserved site CDA09_10360 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_10360 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_10360 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_10360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10360 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CDA09_10360 IPR002197 DNA binding HTH domain, Fis-type CDA09_10360 IPR009057 Homeobox-like domain superfamily CDA09_10360 IPR004096 4-vinyl reductase, 4VR CDA09_10360 IPR010523 Activator of aromatic catabolism CDA09_10370 IPR003593 AAA+ ATPase domain CDA09_10370 IPR025944 Sigma-54 interaction domain, conserved site CDA09_10370 IPR004096 4-vinyl reductase, 4VR CDA09_10370 IPR010523 Activator of aromatic catabolism CDA09_10370 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_10370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10370 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CDA09_10370 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_10370 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_10370 IPR002197 DNA binding HTH domain, Fis-type CDA09_10370 IPR009057 Homeobox-like domain superfamily CDA09_10390 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CDA09_10390 IPR003346 Transposase, IS116/IS110/IS902 CDA09_10395 IPR003776 YcaO-like domain CDA09_10395 IPR041080 YcaO cyclodehydratase, C-terminal CDA09_10400 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_10400 IPR037523 Vicinal oxygen chelate (VOC) domain CDA09_10400 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II CDA09_10400 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_10400 IPR017624 Catechol 2,3 dioxygenase CDA09_10405 IPR010353 Phenol hydroxylase subunit CDA09_10410 IPR009078 Ferritin-like superfamily CDA09_10410 IPR012078 Methane/phenol monooxygenase, hydroxylase component CDA09_10410 IPR012348 Ribonucleotide reductase-like CDA09_10410 IPR003430 Methane/phenol/toluene hydroxylase CDA09_10415 IPR036889 Monooxygenase component MmoB/DmpM superfamily CDA09_10415 IPR003454 Monooxygenase component MmoB/DmpM CDA09_10420 IPR003430 Methane/phenol/toluene hydroxylase CDA09_10420 IPR009078 Ferritin-like superfamily CDA09_10420 IPR012348 Ribonucleotide reductase-like CDA09_10420 IPR007029 YHS domain CDA09_10430 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_10430 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_10430 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDA09_10430 IPR017938 Riboflavin synthase-like beta-barrel CDA09_10430 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_10430 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10430 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDA09_10430 IPR017927 FAD-binding domain, ferredoxin reductase-type CDA09_10430 IPR012675 Beta-grasp domain superfamily CDA09_10435 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_10435 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDA09_10435 IPR015590 Aldehyde dehydrogenase domain CDA09_10435 IPR016160 Aldehyde dehydrogenase, cysteine active site CDA09_10435 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase CDA09_10435 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_10435 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_10440 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CDA09_10440 IPR011234 Fumarylacetoacetase-like, C-terminal CDA09_10445 IPR017630 4-oxalocrotonate decarboxylase CDA09_10445 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CDA09_10455 IPR000534 Semialdehyde dehydrogenase, NAD-binding CDA09_10455 IPR003361 Acetaldehyde dehydrogenase CDA09_10455 IPR015426 Acetaldehyde dehydrogenase, C-terminal CDA09_10455 IPR036291 NAD(P)-binding domain superfamily CDA09_10460 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain CDA09_10460 IPR017629 4-hydroxy-2-oxovalerate aldolase CDA09_10460 IPR012425 DmpG-like communication CDA09_10460 IPR013785 Aldolase-type TIM barrel CDA09_10460 IPR000891 Pyruvate carboxyltransferase CDA09_10465 IPR012675 Beta-grasp domain superfamily CDA09_10465 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_10465 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_10465 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_10470 IPR005467 Histidine kinase domain CDA09_10470 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDA09_10470 IPR007895 MASE1 CDA09_10470 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10470 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10475 IPR011006 CheY-like superfamily CDA09_10475 IPR001789 Signal transduction response regulator, receiver domain CDA09_10475 IPR000792 Transcription regulator LuxR, C-terminal CDA09_10475 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_10480 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A CDA09_10480 IPR009078 Ferritin-like superfamily CDA09_10480 IPR012347 Ferritin-like CDA09_10480 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C CDA09_10485 IPR038693 Phenylacetyl-CoA epoxidase, subunit B CDA09_10485 IPR009359 Phenylacetic acid degradation B CDA09_10490 IPR012347 Ferritin-like CDA09_10490 IPR009078 Ferritin-like superfamily CDA09_10490 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C CDA09_10490 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C CDA09_10495 IPR034904 Fe-S cluster assembly domain superfamily CDA09_10495 IPR002744 MIP18 family-like CDA09_10495 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit CDA09_10500 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDA09_10500 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDA09_10500 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10500 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit CDA09_10500 IPR017938 Riboflavin synthase-like beta-barrel CDA09_10500 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDA09_10500 IPR012675 Beta-grasp domain superfamily CDA09_10500 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_10500 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_10500 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_10500 IPR017927 FAD-binding domain, ferredoxin reductase-type CDA09_10515 IPR016039 Thiolase-like CDA09_10515 IPR020610 Thiolase, active site CDA09_10515 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_10515 IPR002155 Thiolase CDA09_10515 IPR020617 Thiolase, C-terminal CDA09_10515 IPR020613 Thiolase, conserved site CDA09_10515 IPR020616 Thiolase, N-terminal CDA09_10515 IPR012793 Beta-ketoadipyl CoA thiolase CDA09_10520 IPR027051 XdhC Rossmann domain CDA09_10520 IPR003777 XdhC- CoxI CDA09_10525 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CDA09_10525 IPR006311 Twin-arginine translocation pathway, signal sequence CDA09_10525 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CDA09_10525 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDA09_10525 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CDA09_10525 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDA09_10530 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_10530 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_10530 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_10530 IPR036884 [2Fe-2S]-binding domain superfamily CDA09_10530 IPR002888 [2Fe-2S]-binding CDA09_10535 IPR023210 NADP-dependent oxidoreductase domain CDA09_10535 IPR036812 NADP-dependent oxidoreductase domain superfamily CDA09_10535 IPR020471 Aldo/keto reductase CDA09_10540 IPR005119 LysR, substrate-binding CDA09_10540 IPR000847 Transcription regulator HTH, LysR CDA09_10540 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10540 IPR036390 Winged helix DNA-binding domain superfamily CDA09_10545 IPR006015 Universal stress protein A family CDA09_10545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_10545 IPR006016 UspA CDA09_10550 IPR005119 LysR, substrate-binding CDA09_10550 IPR000847 Transcription regulator HTH, LysR CDA09_10550 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10550 IPR036390 Winged helix DNA-binding domain superfamily CDA09_10570 IPR037396 FMN hydroxy acid dehydrogenase domain CDA09_10570 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CDA09_10570 IPR013785 Aldolase-type TIM barrel CDA09_10570 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CDA09_10570 IPR000262 FMN-dependent dehydrogenase CDA09_10575 IPR001851 ABC transporter, permease CDA09_10580 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CDA09_10580 IPR001851 ABC transporter, permease CDA09_10585 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_10585 IPR003593 AAA+ ATPase domain CDA09_10585 IPR003439 ABC transporter-like CDA09_10585 IPR017871 ABC transporter, conserved site CDA09_10585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10590 IPR003439 ABC transporter-like CDA09_10590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10590 IPR017871 ABC transporter, conserved site CDA09_10590 IPR003593 AAA+ ATPase domain CDA09_10590 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_10600 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CDA09_10600 IPR029017 Enolase-like, N-terminal CDA09_10600 IPR036849 Enolase-like, C-terminal domain superfamily CDA09_10600 IPR029065 Enolase C-terminal domain-like CDA09_10600 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CDA09_10600 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CDA09_10600 IPR015654 Mandelate racemase CDA09_10610 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase CDA09_10610 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_10610 IPR001173 Glycosyltransferase 2-like CDA09_10615 IPR011767 Glutaredoxin active site CDA09_10615 IPR036249 Thioredoxin-like superfamily CDA09_10615 IPR011900 Glutaredoxin, GrxC CDA09_10615 IPR014025 Glutaredoxin subgroup CDA09_10615 IPR002109 Glutaredoxin CDA09_10625 IPR007272 Sulphur transport domain CDA09_10635 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDA09_10635 IPR023214 HAD superfamily CDA09_10635 IPR006439 HAD hydrolase, subfamily IA CDA09_10635 IPR036412 HAD-like superfamily CDA09_10635 IPR006328 L-2-Haloacid dehalogenase CDA09_10640 IPR029032 AhpD-like CDA09_10640 IPR003779 Carboxymuconolactone decarboxylase-like CDA09_10640 IPR004675 Alkylhydroperoxidase AhpD core CDA09_10665 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_10665 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDA09_10665 IPR013325 RNA polymerase sigma factor, region 2 CDA09_10665 IPR014284 RNA polymerase sigma-70 like domain CDA09_10665 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CDA09_10665 IPR014289 RNA polymerase sigma-24-related CDA09_10665 IPR039425 RNA polymerase sigma-70 like CDA09_10665 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10665 IPR007627 RNA polymerase sigma-70 region 2 CDA09_10675 IPR003607 HD/PDEase domain CDA09_10675 IPR037522 HD-GYP domain CDA09_10690 IPR003779 Carboxymuconolactone decarboxylase-like CDA09_10690 IPR029032 AhpD-like CDA09_10710 IPR000551 MerR-type HTH domain CDA09_10710 IPR009061 Putative DNA-binding domain superfamily CDA09_10710 IPR015358 Transcription regulator MerR, DNA binding CDA09_10710 IPR011794 Hg(II)-responsive transcriptional regulator CDA09_10715 IPR003457 Mercuric transport protein MerT CDA09_10720 IPR006121 Heavy metal-associated domain, HMA CDA09_10720 IPR036163 Heavy metal-associated domain superfamily CDA09_10720 IPR011795 Mercuric transport protein periplasmic component CDA09_10720 IPR017969 Heavy-metal-associated, conserved site CDA09_10720 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ CDA09_10725 IPR017969 Heavy-metal-associated, conserved site CDA09_10725 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CDA09_10725 IPR006121 Heavy metal-associated domain, HMA CDA09_10725 IPR021179 Mercury(II) reductase CDA09_10725 IPR023753 FAD/NAD(P)-binding domain CDA09_10725 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CDA09_10725 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CDA09_10725 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_10725 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDA09_10725 IPR036163 Heavy metal-associated domain superfamily CDA09_10750 IPR032783 AraC-type transcription regulator, ligand-binding domain CDA09_10750 IPR018062 HTH domain AraC-type, conserved site CDA09_10750 IPR018060 DNA binding HTH domain, AraC-type CDA09_10750 IPR009057 Homeobox-like domain superfamily CDA09_10770 IPR026669 Arsenite methyltransferase-like CDA09_10770 IPR025714 Methyltransferase domain CDA09_10770 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_10780 IPR035906 MetI-like superfamily CDA09_10780 IPR011864 Phosphate ABC transporter, permease protein PstC CDA09_10780 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_10785 IPR035906 MetI-like superfamily CDA09_10785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_10785 IPR011864 Phosphate ABC transporter, permease protein PstC CDA09_10790 IPR005670 Phosphate transport system permease protein 1 CDA09_10790 IPR003593 AAA+ ATPase domain CDA09_10790 IPR003439 ABC transporter-like CDA09_10790 IPR017871 ABC transporter, conserved site CDA09_10790 IPR015850 ABC transporter, phosphate import, PstB CDA09_10790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10795 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDA09_10795 IPR016039 Thiolase-like CDA09_10795 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_10795 IPR014031 Beta-ketoacyl synthase, C-terminal CDA09_10795 IPR018201 Beta-ketoacyl synthase, active site CDA09_10795 IPR000794 Beta-ketoacyl synthase CDA09_10795 IPR014030 Beta-ketoacyl synthase, N-terminal CDA09_10800 IPR003231 Acyl carrier protein (ACP) CDA09_10800 IPR009081 Phosphopantetheine binding ACP domain CDA09_10800 IPR036736 ACP-like superfamily CDA09_10810 IPR005814 Aminotransferase class-III CDA09_10810 IPR036291 NAD(P)-binding domain superfamily CDA09_10810 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_10825 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_10825 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDA09_10825 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_10825 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_10845 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_10845 IPR011006 CheY-like superfamily CDA09_10845 IPR001789 Signal transduction response regulator, receiver domain CDA09_10845 IPR039420 Transcriptional regulatory protein WalR-like CDA09_10845 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_10850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_10850 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_10850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_10850 IPR005467 Histidine kinase domain CDA09_10855 IPR000700 PAS-associated, C-terminal CDA09_10855 IPR035965 PAS domain superfamily CDA09_10855 IPR013656 PAS fold-4 CDA09_10855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_10855 IPR001610 PAC motif CDA09_10855 IPR000014 PAS domain CDA09_10855 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_10855 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_10855 IPR011006 CheY-like superfamily CDA09_10855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_10855 IPR005467 Histidine kinase domain CDA09_10855 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_10855 IPR001789 Signal transduction response regulator, receiver domain CDA09_10860 IPR001789 Signal transduction response regulator, receiver domain CDA09_10860 IPR011006 CheY-like superfamily CDA09_10865 IPR029787 Nucleotide cyclase CDA09_10865 IPR005330 MHYT domain CDA09_10865 IPR001633 EAL domain CDA09_10865 IPR000160 GGDEF domain CDA09_10865 IPR035919 EAL domain superfamily CDA09_10870 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like CDA09_10870 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal CDA09_10870 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic CDA09_10870 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily CDA09_10875 IPR010426 Trimethylamine methyltransferase CDA09_10875 IPR038601 MttB-like superfamily CDA09_10885 IPR002818 DJ-1/PfpI CDA09_10885 IPR009057 Homeobox-like domain superfamily CDA09_10885 IPR018060 DNA binding HTH domain, AraC-type CDA09_10885 IPR018062 HTH domain AraC-type, conserved site CDA09_10885 IPR029062 Class I glutamine amidotransferase-like CDA09_10900 IPR013785 Aldolase-type TIM barrel CDA09_10900 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDA09_10900 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_10905 IPR009051 Alpha-helical ferredoxin CDA09_10905 IPR004017 Cysteine-rich domain CDA09_10905 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_10905 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_10905 IPR036197 NarG-like superfamily CDA09_10910 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CDA09_10910 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal CDA09_10910 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CDA09_10910 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_10910 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDA09_10910 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CDA09_10910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_10925 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CDA09_10930 IPR003439 ABC transporter-like CDA09_10930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_10930 IPR005892 Glycine betaine transport ATP-binding subunit CDA09_10930 IPR000644 CBS domain CDA09_10930 IPR003593 AAA+ ATPase domain CDA09_10930 IPR017871 ABC transporter, conserved site CDA09_10935 IPR035906 MetI-like superfamily CDA09_10935 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_10940 IPR018060 DNA binding HTH domain, AraC-type CDA09_10940 IPR002818 DJ-1/PfpI CDA09_10940 IPR009057 Homeobox-like domain superfamily CDA09_10940 IPR029062 Class I glutamine amidotransferase-like CDA09_10940 IPR018062 HTH domain AraC-type, conserved site CDA09_10945 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDA09_10945 IPR039004 Carnitine monooxygenase oxygenase subunit CDA09_10945 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CDA09_10945 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CDA09_10945 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CDA09_10945 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CDA09_10950 IPR017927 FAD-binding domain, ferredoxin reductase-type CDA09_10950 IPR017938 Riboflavin synthase-like beta-barrel CDA09_10950 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDA09_10950 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDA09_10950 IPR012675 Beta-grasp domain superfamily CDA09_10950 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDA09_10950 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_10950 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_10950 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_10955 IPR010987 Glutathione S-transferase, C-terminal-like CDA09_10955 IPR004045 Glutathione S-transferase, N-terminal CDA09_10955 IPR034330 Glutathione S-transferases, class Zeta , C-terminal CDA09_10955 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_10955 IPR034333 Glutathione S-transferases, class Zeta , N-terminal CDA09_10955 IPR036249 Thioredoxin-like superfamily CDA09_10955 IPR005955 Glutathione S-transferases, class Zeta CDA09_10955 IPR040079 Glutathione Transferase family CDA09_10965 IPR020846 Major facilitator superfamily domain CDA09_10965 IPR036259 MFS transporter superfamily CDA09_10965 IPR005829 Sugar transporter, conserved site CDA09_10965 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family CDA09_10965 IPR011701 Major facilitator superfamily CDA09_10995 IPR011606 Branched-chain amino acid transport, permease CDA09_11010 IPR013096 Cupin 2, conserved barrel CDA09_11010 IPR001387 Cro/C1-type helix-turn-helix domain CDA09_11010 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CDA09_11010 IPR011051 RmlC-like cupin domain superfamily CDA09_11010 IPR014710 RmlC-like jelly roll fold CDA09_11020 IPR018060 DNA binding HTH domain, AraC-type CDA09_11020 IPR009057 Homeobox-like domain superfamily CDA09_11020 IPR029062 Class I glutamine amidotransferase-like CDA09_11020 IPR018062 HTH domain AraC-type, conserved site CDA09_11020 IPR020449 Transcription regulator HTH, AraC- type CDA09_11025 IPR038601 MttB-like superfamily CDA09_11025 IPR010426 Trimethylamine methyltransferase CDA09_11035 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11035 IPR000847 Transcription regulator HTH, LysR CDA09_11035 IPR005119 LysR, substrate-binding CDA09_11035 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11040 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CDA09_11040 IPR039004 Carnitine monooxygenase oxygenase subunit CDA09_11040 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDA09_11040 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CDA09_11040 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CDA09_11040 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CDA09_11045 IPR005892 Glycine betaine transport ATP-binding subunit CDA09_11045 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11045 IPR000644 CBS domain CDA09_11045 IPR017871 ABC transporter, conserved site CDA09_11045 IPR003593 AAA+ ATPase domain CDA09_11045 IPR003439 ABC transporter-like CDA09_11050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_11050 IPR035906 MetI-like superfamily CDA09_11055 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CDA09_11065 IPR018062 HTH domain AraC-type, conserved site CDA09_11065 IPR029062 Class I glutamine amidotransferase-like CDA09_11065 IPR018060 DNA binding HTH domain, AraC-type CDA09_11065 IPR009057 Homeobox-like domain superfamily CDA09_11065 IPR020449 Transcription regulator HTH, AraC- type CDA09_11065 IPR002818 DJ-1/PfpI CDA09_11070 IPR013785 Aldolase-type TIM barrel CDA09_11070 IPR020624 Schiff base-forming aldolase, conserved site CDA09_11070 IPR020625 Schiff base-forming aldolase, active site CDA09_11070 IPR002220 DapA-like CDA09_11070 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CDA09_11075 IPR006076 FAD dependent oxidoreductase CDA09_11075 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_11080 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDA09_11080 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_11080 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_11080 IPR016160 Aldehyde dehydrogenase, cysteine active site CDA09_11080 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_11080 IPR015590 Aldehyde dehydrogenase domain CDA09_11085 IPR000971 Globin CDA09_11085 IPR009050 Globin-like superfamily CDA09_11085 IPR012292 Globin/Protoglobin CDA09_11085 IPR023950 Flavohemoprotein CDA09_11085 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDA09_11085 IPR017938 Riboflavin synthase-like beta-barrel CDA09_11085 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDA09_11085 IPR017927 FAD-binding domain, ferredoxin reductase-type CDA09_11085 IPR001834 NADH:cytochrome b5 reductase-like CDA09_11085 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_11085 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDA09_11090 IPR005330 MHYT domain CDA09_11090 IPR029787 Nucleotide cyclase CDA09_11090 IPR001633 EAL domain CDA09_11090 IPR035919 EAL domain superfamily CDA09_11090 IPR000160 GGDEF domain CDA09_11095 IPR013221 Mur ligase, central CDA09_11095 IPR036615 Mur ligase, C-terminal domain superfamily CDA09_11095 IPR001645 Folylpolyglutamate synthetase CDA09_11095 IPR004101 Mur ligase, C-terminal CDA09_11095 IPR018109 Folylpolyglutamate synthetase, conserved site CDA09_11095 IPR036565 Mur-like, catalytic domain superfamily CDA09_11100 IPR036291 NAD(P)-binding domain superfamily CDA09_11100 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDA09_11100 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CDA09_11100 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDA09_11100 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CDA09_11105 IPR002912 ACT domain CDA09_11105 IPR036477 Formyl transferase, N-terminal domain superfamily CDA09_11105 IPR004810 Formyltetrahydrofolate deformylase CDA09_11105 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CDA09_11105 IPR002376 Formyl transferase, N-terminal CDA09_11110 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CDA09_11110 IPR036594 Methionine synthase domain CDA09_11110 IPR012741 Methyltransferase cognate corrinoid protein CDA09_11110 IPR036724 Cobalamin-binding domain superfamily CDA09_11110 IPR006158 Cobalamin (vitamin B12)-binding domain CDA09_11145 IPR011701 Major facilitator superfamily CDA09_11145 IPR005829 Sugar transporter, conserved site CDA09_11145 IPR020846 Major facilitator superfamily domain CDA09_11145 IPR036259 MFS transporter superfamily CDA09_11150 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11150 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11150 IPR005119 LysR, substrate-binding CDA09_11150 IPR000847 Transcription regulator HTH, LysR CDA09_11150 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain CDA09_11155 IPR005119 LysR, substrate-binding CDA09_11155 IPR000847 Transcription regulator HTH, LysR CDA09_11155 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11155 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11160 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_11160 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_11160 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11160 IPR036291 NAD(P)-binding domain superfamily CDA09_11165 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_11165 IPR036291 NAD(P)-binding domain superfamily CDA09_11165 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11170 IPR002818 DJ-1/PfpI CDA09_11170 IPR018062 HTH domain AraC-type, conserved site CDA09_11170 IPR018060 DNA binding HTH domain, AraC-type CDA09_11170 IPR009057 Homeobox-like domain superfamily CDA09_11170 IPR029062 Class I glutamine amidotransferase-like CDA09_11175 IPR000847 Transcription regulator HTH, LysR CDA09_11175 IPR005119 LysR, substrate-binding CDA09_11175 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11175 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11180 IPR008040 Hydantoinaseoxoprolinase, N-terminal CDA09_11180 IPR002821 Hydantoinase A/oxoprolinase CDA09_11195 IPR006158 Cobalamin (vitamin B12)-binding domain CDA09_11195 IPR036724 Cobalamin-binding domain superfamily CDA09_11195 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CDA09_11195 IPR036594 Methionine synthase domain CDA09_11195 IPR012741 Methyltransferase cognate corrinoid protein CDA09_11200 IPR006158 Cobalamin (vitamin B12)-binding domain CDA09_11200 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily CDA09_11200 IPR036724 Cobalamin-binding domain superfamily CDA09_11200 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CDA09_11200 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CDA09_11200 IPR011005 Dihydropteroate synthase-like CDA09_11200 IPR003726 Homocysteine-binding domain CDA09_11200 IPR036589 Homocysteine-binding domain superfamily CDA09_11200 IPR033706 Methionine synthase, B12-binding domain CDA09_11200 IPR011822 Cobalamin-dependent methionine synthase CDA09_11200 IPR036594 Methionine synthase domain CDA09_11200 IPR000489 Pterin-binding domain CDA09_11215 IPR039429 Serine hydroxymethyltransferase-like domain CDA09_11215 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CDA09_11215 IPR001085 Serine hydroxymethyltransferase CDA09_11215 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_11215 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_11215 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_11220 IPR005130 Serine dehydratase-like, alpha subunit CDA09_11220 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CDA09_11220 IPR029009 Allosteric substrate binding domain superfamily CDA09_11220 IPR005131 Serine dehydratase beta chain CDA09_11225 IPR006076 FAD dependent oxidoreductase CDA09_11225 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_11225 IPR006278 Sarcosine oxidase subunit beta CDA09_11235 IPR042204 2Fe-2S iron-sulfur cluster binding domain, N-terminal CDA09_11235 IPR041117 SoxA, A3 domain CDA09_11235 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_11235 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDA09_11235 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDA09_11235 IPR006222 Aminomethyltransferase, folate-binding domain CDA09_11235 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CDA09_11235 IPR006277 Sarcosine oxidase, alpha subunit CDA09_11235 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CDA09_11235 IPR023753 FAD/NAD(P)-binding domain CDA09_11270 IPR003593 AAA+ ATPase domain CDA09_11270 IPR026253 Methionine import ATP-binding protein MetN CDA09_11270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11270 IPR018449 NIL domain CDA09_11270 IPR003439 ABC transporter-like CDA09_11270 IPR017871 ABC transporter, conserved site CDA09_11270 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CDA09_11270 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CDA09_11275 IPR035906 MetI-like superfamily CDA09_11275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_11280 IPR004872 Lipoprotein NlpA family CDA09_11285 IPR006157 Dihydroneopterin aldolase/epimerase domain CDA09_11285 IPR006156 Dihydroneopterin aldolase CDA09_11295 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CDA09_11295 IPR005860 L-threonine-O-3-phosphate decarboxylase CDA09_11295 IPR004839 Aminotransferase, class I/classII CDA09_11295 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_11295 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_11295 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_11305 IPR036291 NAD(P)-binding domain superfamily CDA09_11305 IPR035015 Methylene tetrahydromethanopterin dehydrogenase, NADP-binding domain CDA09_11305 IPR037089 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal domain superfamily CDA09_11305 IPR015259 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal CDA09_11315 IPR003209 Methenyltetrahydromethanopterin cyclohydrolase CDA09_11320 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK CDA09_11320 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX CDA09_11320 IPR041107 RimK, PreATP-grasp domain CDA09_11320 IPR013815 ATP-grasp fold, subdomain 1 CDA09_11320 IPR011761 ATP-grasp fold CDA09_11320 IPR013651 ATP-grasp fold, RimK-type CDA09_11330 IPR014826 Formaldehyde-activating enzyme CDA09_11330 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_11330 IPR037075 Formaldehyde-activating enzyme superfamily CDA09_11340 IPR003018 GAF domain CDA09_11340 IPR009057 Homeobox-like domain superfamily CDA09_11340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11340 IPR025944 Sigma-54 interaction domain, conserved site CDA09_11340 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_11340 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_11340 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_11340 IPR029016 GAF-like domain superfamily CDA09_11340 IPR003593 AAA+ ATPase domain CDA09_11340 IPR002197 DNA binding HTH domain, Fis-type CDA09_11350 IPR013785 Aldolase-type TIM barrel CDA09_11350 IPR006062 Histidine biosynthesis CDA09_11350 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CDA09_11350 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CDA09_11350 IPR011060 Ribulose-phosphate binding barrel CDA09_11390 IPR003423 Outer membrane efflux protein CDA09_11390 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CDA09_11395 IPR011006 CheY-like superfamily CDA09_11395 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_11395 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response CDA09_11395 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_11395 IPR001789 Signal transduction response regulator, receiver domain CDA09_11395 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11395 IPR039420 Transcriptional regulatory protein WalR-like CDA09_11400 IPR003660 HAMP domain CDA09_11400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_11400 IPR005467 Histidine kinase domain CDA09_11400 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_11400 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_11400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_11400 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_11415 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_11415 IPR001036 Acriflavin resistance protein CDA09_11415 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CDA09_11440 IPR004779 Carboxylate/Amino Acid/Amine Transporter CDA09_11440 IPR000620 EamA domain CDA09_11470 IPR036909 Cytochrome c-like domain superfamily CDA09_11470 IPR009056 Cytochrome c-like domain CDA09_11520 IPR011059 Metal-dependent hydrolase, composite domain superfamily CDA09_11520 IPR012027 Formylmethanofuran dehydrogenase, subunit A CDA09_11520 IPR032466 Metal-dependent hydrolase CDA09_11520 IPR013108 Amidohydrolase 3 CDA09_11540 IPR005802 Aminodeoxychorismate synthase, component I CDA09_11540 IPR005801 ADC synthase CDA09_11540 IPR006805 Anthranilate synthase component I, N-terminal CDA09_11540 IPR015890 Chorismate-utilising enzyme, C-terminal CDA09_11540 IPR029062 Class I glutamine amidotransferase-like CDA09_11540 IPR017926 Glutamine amidotransferase CDA09_11540 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CDA09_11545 IPR023214 HAD superfamily CDA09_11545 IPR036412 HAD-like superfamily CDA09_11545 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CDA09_11550 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CDA09_11550 IPR002986 Diaminopimelate decarboxylase, LysA CDA09_11550 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CDA09_11550 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CDA09_11550 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CDA09_11550 IPR000183 Ornithine/DAP/Arg decarboxylase CDA09_11550 IPR029066 PLP-binding barrel CDA09_11550 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CDA09_11555 IPR018234 GTP cyclohydrolase I, conserved site CDA09_11555 IPR001474 GTP cyclohydrolase I CDA09_11555 IPR020602 GTP cyclohydrolase I domain CDA09_11560 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11560 IPR005119 LysR, substrate-binding CDA09_11560 IPR000847 Transcription regulator HTH, LysR CDA09_11560 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11565 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I CDA09_11565 IPR036422 RuBisCO large subunit, N-terminal domain superfamily CDA09_11565 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily CDA09_11565 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal CDA09_11565 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site CDA09_11565 IPR033966 RuBisCO CDA09_11565 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal CDA09_11570 IPR000894 Ribulose bisphosphate carboxylase small chain, domain CDA09_11570 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily CDA09_11575 IPR041627 CbbX, AAA lid domain CDA09_11575 IPR003593 AAA+ ATPase domain CDA09_11575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11575 IPR003959 ATPase, AAA-type, core CDA09_11575 IPR000641 CbxX/CfxQ CDA09_11575 IPR000470 CbxX/CfxQ, monofunctional CDA09_11580 IPR000146 Fructose-1,6-bisphosphatase class 1 CDA09_11580 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal CDA09_11580 IPR028343 Fructose-1,6-bisphosphatase CDA09_11580 IPR020548 Fructose-1,6-bisphosphatase, active site CDA09_11585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11585 IPR006083 Phosphoribulokinase/uridine kinase CDA09_11585 IPR006082 Phosphoribulokinase CDA09_11590 IPR029061 Thiamin diphosphate-binding fold CDA09_11590 IPR005474 Transketolase, N-terminal CDA09_11590 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CDA09_11590 IPR033247 Transketolase family CDA09_11590 IPR033248 Transketolase, C-terminal domain CDA09_11590 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_11590 IPR005478 Transketolase, bacterial-like CDA09_11590 IPR020826 Transketolase binding site CDA09_11595 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CDA09_11595 IPR036291 NAD(P)-binding domain superfamily CDA09_11595 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CDA09_11595 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CDA09_11595 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CDA09_11595 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CDA09_11600 IPR015911 Phosphoglycerate kinase, conserved site CDA09_11600 IPR001576 Phosphoglycerate kinase CDA09_11600 IPR036043 Phosphoglycerate kinase superfamily CDA09_11600 IPR015824 Phosphoglycerate kinase, N-terminal CDA09_11605 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype CDA09_11605 IPR000771 Fructose-bisphosphate aldolase, class-II CDA09_11605 IPR013785 Aldolase-type TIM barrel CDA09_11610 IPR008250 P-type ATPase, A domain superfamily CDA09_11610 IPR023298 P-type ATPase, transmembrane domain superfamily CDA09_11610 IPR036412 HAD-like superfamily CDA09_11610 IPR023299 P-type ATPase, cytoplasmic domain N CDA09_11610 IPR006415 P-type ATPase, subfamily IIIB CDA09_11610 IPR001757 P-type ATPase CDA09_11610 IPR004014 Cation-transporting P-type ATPase, N-terminal CDA09_11610 IPR006068 Cation-transporting P-type ATPase, C-terminal CDA09_11610 IPR018303 P-type ATPase, phosphorylation site CDA09_11610 IPR023214 HAD superfamily CDA09_11625 IPR011541 Nickel/cobalt transporter, high-affinity CDA09_11640 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_11640 IPR035906 MetI-like superfamily CDA09_11645 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_11645 IPR035906 MetI-like superfamily CDA09_11655 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11655 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_11655 IPR036291 NAD(P)-binding domain superfamily CDA09_11675 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 CDA09_11675 IPR004706 Arsenical-resistance protein Acr3 CDA09_11675 IPR038770 Sodium/solute symporter superfamily CDA09_11680 IPR023485 Phosphotyrosine protein phosphatase I CDA09_11680 IPR036196 Phosphotyrosine protein phosphatase I superfamily CDA09_11680 IPR014064 Arsenate reductase ArsC CDA09_11690 IPR010987 Glutathione S-transferase, C-terminal-like CDA09_11690 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDA09_11690 IPR004045 Glutathione S-transferase, N-terminal CDA09_11690 IPR040079 Glutathione Transferase family CDA09_11690 IPR036249 Thioredoxin-like superfamily CDA09_11695 IPR013149 Alcohol dehydrogenase, C-terminal CDA09_11695 IPR013154 Alcohol dehydrogenase, N-terminal CDA09_11695 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDA09_11695 IPR011032 GroES-like superfamily CDA09_11695 IPR036291 NAD(P)-binding domain superfamily CDA09_11695 IPR020843 Polyketide synthase, enoylreductase domain CDA09_11725 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type CDA09_11725 IPR014347 Tautomerase/MIF superfamily CDA09_11725 IPR004370 4-oxalocrotonate tautomerase CDA09_11730 IPR011545 DEAD/DEAH box helicase domain CDA09_11730 IPR004609 ATP-dependent DNA helicase RecG CDA09_11730 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_11730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11730 IPR012340 Nucleic acid-binding, OB-fold CDA09_11730 IPR033454 RecG, wedge domain CDA09_11730 IPR001650 Helicase, C-terminal CDA09_11735 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_11735 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CDA09_11735 IPR003710 Ketopantoate reductase ApbA/PanE CDA09_11735 IPR013752 Ketopantoate reductase, C-terminal domain CDA09_11735 IPR013332 Ketopantoate reductase, N-terminal domain CDA09_11735 IPR036291 NAD(P)-binding domain superfamily CDA09_11740 IPR011673 Protein of unknown function DUF1615 CDA09_11745 IPR024935 Rubredoxin domain CDA09_11745 IPR024934 Rubredoxin-like domain CDA09_11745 IPR024922 Rubredoxin CDA09_11745 IPR018527 Rubredoxin, iron-binding site CDA09_11750 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_11750 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_11750 IPR029045 ClpP/crotonase-like domain superfamily CDA09_11750 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_11755 IPR020845 AMP-binding, conserved site CDA09_11755 IPR042099 AMP-dependent synthetase-like superfamily CDA09_11755 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_11755 IPR000873 AMP-dependent synthetase/ligase CDA09_11760 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_11760 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_11760 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_11760 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_11760 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_11760 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_11760 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_11765 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11765 IPR000835 MarR-type HTH domain CDA09_11765 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11765 IPR023187 Transcriptional regulator MarR-type, conserved site CDA09_11770 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_11770 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_11770 IPR036291 NAD(P)-binding domain superfamily CDA09_11770 IPR011283 Acetoacetyl-CoA reductase CDA09_11775 IPR029045 ClpP/crotonase-like domain superfamily CDA09_11775 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB CDA09_11775 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_11775 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_11775 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_11780 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_11780 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_11780 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_11780 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_11780 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_11780 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_11780 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_11790 IPR001451 Hexapeptide repeat CDA09_11790 IPR023446 Carnitine operon protein CaiE CDA09_11790 IPR011004 Trimeric LpxA-like superfamily CDA09_11795 IPR029045 ClpP/crotonase-like domain superfamily CDA09_11795 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_11795 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_11795 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_11800 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CDA09_11800 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CDA09_11800 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDA09_11800 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC CDA09_11800 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDA09_11800 IPR036291 NAD(P)-binding domain superfamily CDA09_11800 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_11805 IPR020616 Thiolase, N-terminal CDA09_11805 IPR016039 Thiolase-like CDA09_11805 IPR012793 Beta-ketoadipyl CoA thiolase CDA09_11805 IPR020610 Thiolase, active site CDA09_11805 IPR002155 Thiolase CDA09_11805 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_11805 IPR020613 Thiolase, conserved site CDA09_11805 IPR020617 Thiolase, C-terminal CDA09_11830 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme CDA09_11830 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CDA09_11830 IPR012000 Thiamine pyrophosphate enzyme, central domain CDA09_11830 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDA09_11830 IPR029061 Thiamin diphosphate-binding fold CDA09_11830 IPR017765 Indole-3-pyruvate decarboxylase CDA09_11830 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_11835 IPR019888 Transcription regulator AsnC-type CDA09_11835 IPR011008 Dimeric alpha-beta barrel CDA09_11835 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDA09_11835 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDA09_11835 IPR000485 AsnC-type HTH domain CDA09_11835 IPR036390 Winged helix DNA-binding domain superfamily CDA09_11835 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_11840 IPR006311 Twin-arginine translocation pathway, signal sequence CDA09_11840 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily CDA09_11840 IPR010275 Protein of unknown function DUF882 CDA09_11845 IPR036365 PGBD-like superfamily CDA09_11845 IPR038063 L,D-transpeptidase catalytic domain-like CDA09_11845 IPR002477 Peptidoglycan binding-like CDA09_11845 IPR005490 L,D-transpeptidase catalytic domain CDA09_11850 IPR011053 Single hybrid motif CDA09_11850 IPR004167 Peripheral subunit-binding domain CDA09_11850 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CDA09_11850 IPR000089 Biotin/lipoyl attachment CDA09_11850 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CDA09_11850 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDA09_11850 IPR036625 E3-binding domain superfamily CDA09_11855 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CDA09_11855 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_11855 IPR033248 Transketolase, C-terminal domain CDA09_11855 IPR029061 Thiamin diphosphate-binding fold CDA09_11860 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha CDA09_11860 IPR029061 Thiamin diphosphate-binding fold CDA09_11860 IPR001017 Dehydrogenase, E1 component CDA09_11865 IPR000727 Target SNARE coiled-coil homology domain CDA09_11865 IPR004090 Chemotaxis methyl-accepting receptor CDA09_11865 IPR033479 Double Cache domain 1 CDA09_11865 IPR003660 HAMP domain CDA09_11865 IPR029151 Periplasmic sensor-like domain superfamily CDA09_11865 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDA09_11880 IPR014017 UvrD-like DNA helicase, C-terminal CDA09_11880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11880 IPR000212 DNA helicase, UvrD/REP type CDA09_11880 IPR014016 UvrD-like helicase, ATP-binding domain CDA09_11880 IPR013986 DExx box DNA helicase domain superfamily CDA09_11880 IPR005751 ATP-dependent DNA helicase PcrA CDA09_11880 IPR034739 UvrD/AddA helicase, N-terminal CDA09_11890 IPR036249 Thioredoxin-like superfamily CDA09_11890 IPR024706 Peroxiredoxin, AhpC-type CDA09_11890 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDA09_11890 IPR013766 Thioredoxin domain CDA09_11895 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDA09_11900 IPR003593 AAA+ ATPase domain CDA09_11900 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDA09_11900 IPR003439 ABC transporter-like CDA09_11900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11900 IPR017871 ABC transporter, conserved site CDA09_11905 IPR008258 Transglycosylase SLT domain 1 CDA09_11905 IPR000189 Prokaryotic transglycosylase, active site CDA09_11905 IPR023346 Lysozyme-like domain superfamily CDA09_11905 IPR036779 LysM domain superfamily CDA09_11905 IPR018392 LysM domain CDA09_11910 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_11910 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CDA09_11910 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CDA09_11910 IPR017782 Hydroxyacylglutathione hydrolase CDA09_11910 IPR001279 Metallo-beta-lactamase CDA09_11920 IPR002156 Ribonuclease H domain CDA09_11920 IPR022892 Ribonuclease HI CDA09_11920 IPR036397 Ribonuclease H superfamily CDA09_11920 IPR012337 Ribonuclease H-like superfamily CDA09_11925 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CDA09_11925 IPR006309 DNA polymerase 3, epsilon subunit CDA09_11925 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_11925 IPR036397 Ribonuclease H superfamily CDA09_11925 IPR012337 Ribonuclease H-like superfamily CDA09_11930 IPR001045 Spermidine/spermine synthases CDA09_11930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_11930 IPR030374 Polyamine biosynthesis domain CDA09_11940 IPR000883 Cytochrome c oxidase subunit I CDA09_11940 IPR023616 Cytochrome c oxidase-like, subunit I domain CDA09_11940 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CDA09_11940 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CDA09_11940 IPR004677 Cytochrome c oxidase cbb3-type, subunit I CDA09_11950 IPR036909 Cytochrome c-like domain superfamily CDA09_11950 IPR009056 Cytochrome c-like domain CDA09_11950 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit CDA09_11965 IPR016132 Phytochrome chromophore attachment domain CDA09_11965 IPR029016 GAF-like domain superfamily CDA09_11965 IPR000160 GGDEF domain CDA09_11965 IPR029787 Nucleotide cyclase CDA09_11965 IPR003018 GAF domain CDA09_11965 IPR035919 EAL domain superfamily CDA09_11965 IPR001633 EAL domain CDA09_11965 IPR001294 Phytochrome CDA09_11965 IPR013515 Phytochrome, central region CDA09_11970 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CDA09_11970 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDA09_11970 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDA09_11970 IPR010051 Periplasmic nitrate reductase, large subunit CDA09_11970 IPR006657 Molybdopterin dinucleotide-binding domain CDA09_11970 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain CDA09_11970 IPR006311 Twin-arginine translocation pathway, signal sequence CDA09_11970 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_11970 IPR006656 Molybdopterin oxidoreductase CDA09_11980 IPR009056 Cytochrome c-like domain CDA09_11980 IPR036909 Cytochrome c-like domain superfamily CDA09_11980 IPR004852 Di-haem cytochrome c peroxidase CDA09_11980 IPR022394 Methylamine utilisation protein, MauG CDA09_11980 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase CDA09_11985 IPR009056 Cytochrome c-like domain CDA09_11985 IPR022394 Methylamine utilisation protein, MauG CDA09_11985 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase CDA09_11985 IPR036909 Cytochrome c-like domain superfamily CDA09_11985 IPR004852 Di-haem cytochrome c peroxidase CDA09_11990 IPR025944 Sigma-54 interaction domain, conserved site CDA09_11990 IPR002197 DNA binding HTH domain, Fis-type CDA09_11990 IPR009057 Homeobox-like domain superfamily CDA09_11990 IPR011006 CheY-like superfamily CDA09_11990 IPR003593 AAA+ ATPase domain CDA09_11990 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_11990 IPR001789 Signal transduction response regulator, receiver domain CDA09_11990 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_11990 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_11990 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_11995 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_11995 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_11995 IPR005467 Histidine kinase domain CDA09_11995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_11995 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_11995 IPR013767 PAS fold CDA09_11995 IPR000014 PAS domain CDA09_11995 IPR035965 PAS domain superfamily CDA09_11995 IPR000700 PAS-associated, C-terminal CDA09_11995 IPR003660 HAMP domain CDA09_11995 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_12000 IPR006237 L-methionine gamma-lyase CDA09_12000 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_12000 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_12000 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDA09_12000 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_12005 IPR000620 EamA domain CDA09_12010 IPR009056 Cytochrome c-like domain CDA09_12010 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase CDA09_12010 IPR004852 Di-haem cytochrome c peroxidase CDA09_12010 IPR036909 Cytochrome c-like domain superfamily CDA09_12020 IPR000594 THIF-type NAD/FAD binding fold CDA09_12020 IPR035985 Ubiquitin-activating enzyme CDA09_12025 IPR005856 Cysteine synthase CDA09_12025 IPR005858 Cysteine synthase CysM CDA09_12025 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_12025 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_12025 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CDA09_12030 IPR024706 Peroxiredoxin, AhpC-type CDA09_12030 IPR019479 Peroxiredoxin, C-terminal CDA09_12030 IPR022915 Peroxiredoxin, TDXH subfamily CDA09_12030 IPR036249 Thioredoxin-like superfamily CDA09_12030 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDA09_12030 IPR013766 Thioredoxin domain CDA09_12055 IPR006696 Protein of unknown function DUF423 CDA09_12060 IPR005829 Sugar transporter, conserved site CDA09_12060 IPR020846 Major facilitator superfamily domain CDA09_12060 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family CDA09_12060 IPR011701 Major facilitator superfamily CDA09_12060 IPR036259 MFS transporter superfamily CDA09_12065 IPR017871 ABC transporter, conserved site CDA09_12065 IPR003593 AAA+ ATPase domain CDA09_12065 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_12065 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12065 IPR003439 ABC transporter-like CDA09_12070 IPR017871 ABC transporter, conserved site CDA09_12070 IPR003439 ABC transporter-like CDA09_12070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12070 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_12070 IPR003593 AAA+ ATPase domain CDA09_12075 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CDA09_12075 IPR001851 ABC transporter, permease CDA09_12080 IPR001851 ABC transporter, permease CDA09_12090 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_12090 IPR011957 Benzoate-CoA ligase family CDA09_12090 IPR000873 AMP-dependent synthetase/ligase CDA09_12095 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_12095 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_12095 IPR036291 NAD(P)-binding domain superfamily CDA09_12095 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_12100 IPR017613 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase CDA09_12100 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_12100 IPR029045 ClpP/crotonase-like domain superfamily CDA09_12105 IPR013154 Alcohol dehydrogenase, N-terminal CDA09_12105 IPR013149 Alcohol dehydrogenase, C-terminal CDA09_12105 IPR017614 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase CDA09_12105 IPR011032 GroES-like superfamily CDA09_12105 IPR036291 NAD(P)-binding domain superfamily CDA09_12105 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDA09_12110 IPR029045 ClpP/crotonase-like domain superfamily CDA09_12110 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_12110 IPR017602 Cyclohexa-1,5-dienecarbonyl-CoA hydratase CDA09_12120 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CDA09_12120 IPR023753 FAD/NAD(P)-binding domain CDA09_12120 IPR009051 Alpha-helical ferredoxin CDA09_12120 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12120 IPR028261 Dihydroprymidine dehydrogenase domain II CDA09_12120 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CDA09_12145 IPR008275 CoA enzyme activase CDA09_12145 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CDA09_12150 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CDA09_12150 IPR008275 CoA enzyme activase CDA09_12155 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_12160 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_12165 IPR031322 Shikimate kinase/gluconokinase CDA09_12165 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12165 IPR023000 Shikimate kinase, conserved site CDA09_12165 IPR000623 Shikimate kinase/Threonine synthase-like 1 CDA09_12175 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CDA09_12175 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CDA09_12175 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDA09_12175 IPR033910 Glutamyl-tRNA synthetase CDA09_12175 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CDA09_12175 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CDA09_12175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_12175 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CDA09_12210 IPR012938 Glucose/Sorbosone dehydrogenase CDA09_12210 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CDA09_12210 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_12230 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_12230 IPR000524 Transcription regulator HTH, GntR CDA09_12230 IPR036390 Winged helix DNA-binding domain superfamily CDA09_12230 IPR011711 GntR, C-terminal CDA09_12230 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_12235 IPR028082 Periplasmic binding protein-like I CDA09_12235 IPR000709 Leu/Ile/Val-binding protein CDA09_12235 IPR028081 Leucine-binding protein domain CDA09_12240 IPR001851 ABC transporter, permease CDA09_12245 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CDA09_12245 IPR001851 ABC transporter, permease CDA09_12250 IPR017871 ABC transporter, conserved site CDA09_12250 IPR003439 ABC transporter-like CDA09_12250 IPR003593 AAA+ ATPase domain CDA09_12250 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_12250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12255 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_12255 IPR003439 ABC transporter-like CDA09_12255 IPR003593 AAA+ ATPase domain CDA09_12255 IPR017871 ABC transporter, conserved site CDA09_12255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12265 IPR001789 Signal transduction response regulator, receiver domain CDA09_12265 IPR000792 Transcription regulator LuxR, C-terminal CDA09_12265 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_12265 IPR011006 CheY-like superfamily CDA09_12270 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_12270 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_12270 IPR033480 Single Cache domain 2 CDA09_12270 IPR017171 Signal transduction histidine kinase, MctS CDA09_12270 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDA09_12275 IPR003706 CstA, N-terminal domain CDA09_12275 IPR025299 CstA, C-terminal domain CDA09_12280 IPR007423 Selenoprotein, putative CDA09_12285 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12285 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CDA09_12285 IPR036627 CobW-like, C-terminal domain superfamily CDA09_12285 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDA09_12295 IPR001633 EAL domain CDA09_12295 IPR035919 EAL domain superfamily CDA09_12295 IPR000160 GGDEF domain CDA09_12295 IPR005330 MHYT domain CDA09_12295 IPR029787 Nucleotide cyclase CDA09_12300 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_12300 IPR001789 Signal transduction response regulator, receiver domain CDA09_12300 IPR036641 HPT domain superfamily CDA09_12300 IPR019247 Histidine kinase BarA, N-terminal CDA09_12300 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_12300 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_12300 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_12300 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_12300 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDA09_12300 IPR003660 HAMP domain CDA09_12300 IPR011006 CheY-like superfamily CDA09_12300 IPR005467 Histidine kinase domain CDA09_12310 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12310 IPR028348 FAD dependent protein CDA09_12315 IPR036259 MFS transporter superfamily CDA09_12315 IPR010645 Uncharacterised MFS-type transporter YbfB CDA09_12325 IPR006073 GTP binding domain CDA09_12325 IPR019991 GTP-binding protein, ribosome biogenesis CDA09_12325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12325 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily CDA09_12325 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CDA09_12325 IPR016478 GTPase, MTG1 CDA09_12345 IPR010061 Methylmalonate-semialdehyde dehydrogenase CDA09_12345 IPR016160 Aldehyde dehydrogenase, cysteine active site CDA09_12345 IPR015590 Aldehyde dehydrogenase domain CDA09_12345 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria CDA09_12345 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_12345 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_12345 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_12350 IPR002550 CNNM, transmembrane domain CDA09_12350 IPR036318 FAD-binding, type PCMH-like superfamily CDA09_12350 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_12350 IPR000644 CBS domain CDA09_12350 IPR005170 Transporter-associated domain CDA09_12355 IPR038590 YaeQ superfamily CDA09_12355 IPR009822 YaeQ CDA09_12355 IPR011335 Restriction endonuclease type II-like CDA09_12365 IPR032882 SrkA/RdoA protein kinase CDA09_12365 IPR011009 Protein kinase-like domain superfamily CDA09_12365 IPR002575 Aminoglycoside phosphotransferase CDA09_12370 IPR018234 GTP cyclohydrolase I, conserved site CDA09_12370 IPR001474 GTP cyclohydrolase I CDA09_12370 IPR020602 GTP cyclohydrolase I domain CDA09_12380 IPR001204 Phosphate transporter CDA09_12390 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDA09_12390 IPR007473 Ribosomal RNA large subunit methyltransferase J CDA09_12390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_12395 IPR011004 Trimeric LpxA-like superfamily CDA09_12395 IPR001451 Hexapeptide repeat CDA09_12415 IPR038765 Papain-like cysteine peptidase superfamily CDA09_12415 IPR000064 Endopeptidase, NLPC/P60 domain CDA09_12420 IPR007060 Septum formation initiator FtsL/DivIC CDA09_12420 IPR023081 Cell division protein FtsB CDA09_12425 IPR020810 Enolase, C-terminal TIM barrel domain CDA09_12425 IPR020811 Enolase, N-terminal CDA09_12425 IPR000941 Enolase CDA09_12425 IPR036849 Enolase-like, C-terminal domain superfamily CDA09_12425 IPR029017 Enolase-like, N-terminal CDA09_12425 IPR020809 Enolase, conserved site CDA09_12430 IPR013785 Aldolase-type TIM barrel CDA09_12430 IPR006269 3-deoxy-8-phosphooctulonate synthase CDA09_12430 IPR006218 DAHP synthetase I/KDSA CDA09_12435 IPR004468 CTP synthase CDA09_12435 IPR017456 CTP synthase, N-terminal CDA09_12435 IPR017926 Glutamine amidotransferase CDA09_12435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12435 IPR033828 CTP synthase GATase domain CDA09_12435 IPR029062 Class I glutamine amidotransferase-like CDA09_12445 IPR036380 Isochorismatase-like superfamily CDA09_12445 IPR000868 Isochorismatase-like CDA09_12455 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_12455 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase CDA09_12455 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12465 IPR036676 PurM-like, C-terminal domain superfamily CDA09_12465 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal CDA09_12465 IPR029062 Class I glutamine amidotransferase-like CDA09_12465 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily CDA09_12465 IPR010073 Phosphoribosylformylglycinamidine synthase PurL CDA09_12465 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain CDA09_12465 IPR010918 PurM-like, C-terminal domain CDA09_12465 IPR036921 PurM-like, N-terminal domain superfamily CDA09_12465 IPR017926 Glutamine amidotransferase CDA09_12475 IPR001173 Glycosyltransferase 2-like CDA09_12475 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_12480 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase CDA09_12480 IPR003342 Glycosyl transferase family 39/83 CDA09_12485 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDA09_12485 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDA09_12505 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDA09_12505 IPR023753 FAD/NAD(P)-binding domain CDA09_12505 IPR013785 Aldolase-type TIM barrel CDA09_12505 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_12520 IPR036637 Phosphohistidine domain superfamily CDA09_12520 IPR023151 PEP-utilising enzyme, conserved site CDA09_12520 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDA09_12520 IPR040442 Pyruvate kinase-like domain superfamily CDA09_12520 IPR000121 PEP-utilising enzyme, C-terminal CDA09_12520 IPR018274 PEP-utilising enzyme, active site CDA09_12520 IPR006319 Phosphoenolpyruvate synthase CDA09_12520 IPR008279 PEP-utilising enzyme, mobile domain CDA09_12520 IPR013815 ATP-grasp fold, subdomain 1 CDA09_12520 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CDA09_12525 IPR026530 Phosphoenolpyruvate synthase regulatory protein CDA09_12525 IPR005177 Bifunctional kinase-pyrophosphorylase CDA09_12535 IPR028427 Peptide methionine sulfoxide reductase CDA09_12535 IPR011057 Mss4-like superfamily CDA09_12535 IPR002579 Peptide methionine sulphoxide reductase MrsB CDA09_12550 IPR035681 ComA-like, MBL domain CDA09_12550 IPR004477 ComEC/Rec2-related protein CDA09_12550 IPR004797 Competence protein ComEC/Rec2 CDA09_12550 IPR001279 Metallo-beta-lactamase CDA09_12550 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_12555 IPR003439 ABC transporter-like CDA09_12555 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12555 IPR011924 Lipoprotein releasing system, ATP-binding protein CDA09_12555 IPR015854 ABC transporter, lipoprotein release, LolD CDA09_12555 IPR017871 ABC transporter, conserved site CDA09_12555 IPR003593 AAA+ ATPase domain CDA09_12560 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E CDA09_12560 IPR003838 ABC transporter permease protein domain CDA09_12560 IPR025857 MacB-like periplasmic core domain CDA09_12565 IPR003804 L-lactate permease CDA09_12585 IPR041122 RecJ, OB domain CDA09_12585 IPR004610 Bacterial RecJ exonuclease CDA09_12585 IPR003156 DHHA1 domain CDA09_12585 IPR038763 DHH phosphoesterase superfamily CDA09_12585 IPR001667 DDH domain CDA09_12590 IPR005618 Outer membrane protein, OmpW CDA09_12590 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDA09_12610 IPR003395 RecF/RecN/SMC, N-terminal CDA09_12610 IPR024704 Structural maintenance of chromosomes protein CDA09_12610 IPR010935 SMCs flexible hinge CDA09_12610 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12610 IPR011890 Structural maintenance of chromosomes protein, prokaryotic CDA09_12610 IPR036277 SMCs flexible hinge superfamily CDA09_12620 IPR020846 Major facilitator superfamily domain CDA09_12620 IPR011701 Major facilitator superfamily CDA09_12620 IPR036259 MFS transporter superfamily CDA09_12625 IPR011650 Peptidase M20, dimerisation domain CDA09_12625 IPR002933 Peptidase M20 CDA09_12625 IPR017439 Amidohydrolase CDA09_12625 IPR036264 Bacterial exopeptidase dimerisation domain CDA09_12635 IPR012904 8-oxoguanine DNA glycosylase, N-terminal CDA09_12635 IPR003265 HhH-GPD domain CDA09_12635 IPR011257 DNA glycosylase CDA09_12635 IPR000035 Alkylbase DNA glycosidase, conserved site CDA09_12640 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CDA09_12640 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_12640 IPR016221 Bifunctional regulatory protein Ada CDA09_12640 IPR004026 Ada DNA repair, metal-binding CDA09_12640 IPR018062 HTH domain AraC-type, conserved site CDA09_12640 IPR018060 DNA binding HTH domain, AraC-type CDA09_12640 IPR009057 Homeobox-like domain superfamily CDA09_12640 IPR035451 Ada-like domain superfamily CDA09_12640 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CDA09_12640 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CDA09_12640 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CDA09_12640 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CDA09_12645 IPR024530 Putative quorum-sensing-regulated virulence factor CDA09_12650 IPR011650 Peptidase M20, dimerisation domain CDA09_12650 IPR002933 Peptidase M20 CDA09_12650 IPR001160 Peptidase M20C, Xaa-His dipeptidase CDA09_12660 IPR011009 Protein kinase-like domain superfamily CDA09_12660 IPR010232 Probable protein kinase UbiB CDA09_12660 IPR004147 UbiB domain CDA09_12665 IPR003838 ABC transporter permease protein domain CDA09_12665 IPR003439 ABC transporter-like CDA09_12665 IPR017871 ABC transporter, conserved site CDA09_12665 IPR017911 ABC transporter, macrolide export, ATP-binding domain CDA09_12665 IPR003593 AAA+ ATPase domain CDA09_12665 IPR025857 MacB-like periplasmic core domain CDA09_12665 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12675 IPR006143 RND efflux pump, membrane fusion protein CDA09_12675 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDA09_12675 IPR022824 Multidrug resistance protein MdtA CDA09_12680 IPR001647 DNA-binding HTH domain, TetR-type CDA09_12680 IPR023769 Nucleoid occlusion factor SlmA CDA09_12680 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_12680 IPR009057 Homeobox-like domain superfamily CDA09_12685 IPR003593 AAA+ ATPase domain CDA09_12685 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CDA09_12685 IPR041166 LapB, rubredoxin metal binding domain CDA09_12685 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_12685 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_12685 IPR004504 DNA repair protein RadA CDA09_12685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12695 IPR036259 MFS transporter superfamily CDA09_12695 IPR011701 Major facilitator superfamily CDA09_12695 IPR023727 Lysophospholipid transporter LplT CDA09_12700 IPR036895 Uracil-DNA glycosylase-like domain superfamily CDA09_12700 IPR005273 Uracil-DNA glycosylase family 4 CDA09_12700 IPR005122 Uracil-DNA glycosylase-like CDA09_12705 IPR016181 Acyl-CoA N-acyltransferase CDA09_12705 IPR006464 N-acetyltransferase RimI/Ard1 CDA09_12705 IPR000182 GNAT domain CDA09_12710 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB CDA09_12710 IPR000905 Gcp-like domain CDA09_12720 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_12720 IPR011006 CheY-like superfamily CDA09_12720 IPR001789 Signal transduction response regulator, receiver domain CDA09_12720 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_12720 IPR039420 Transcriptional regulatory protein WalR-like CDA09_12720 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_12725 IPR003660 HAMP domain CDA09_12725 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_12725 IPR005467 Histidine kinase domain CDA09_12725 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_12725 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_12725 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_12725 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_12730 IPR006008 Intracellular septation protein A CDA09_12735 IPR005545 YCII-related CDA09_12735 IPR011008 Dimeric alpha-beta barrel CDA09_12740 IPR036065 BolA-like superfamily CDA09_12740 IPR002634 BolA protein CDA09_12745 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CDA09_12745 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CDA09_12750 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_12750 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_12750 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_12750 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_12750 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDA09_12750 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_12750 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_12755 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDA09_12755 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal CDA09_12755 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_12755 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CDA09_12755 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CDA09_12755 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CDA09_12755 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_12760 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CDA09_12760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_12760 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CDA09_12760 IPR012255 Electron transfer flavoprotein, beta subunit CDA09_12760 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDA09_12765 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_12765 IPR009057 Homeobox-like domain superfamily CDA09_12765 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_12765 IPR013572 Transcription regulator MAATS, C-terminal CDA09_12765 IPR001647 DNA-binding HTH domain, TetR-type CDA09_12770 IPR032466 Metal-dependent hydrolase CDA09_12770 IPR001130 TatD family CDA09_12770 IPR018228 Deoxyribonuclease, TatD-related, conserved site CDA09_12775 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_12775 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_12775 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_12775 IPR029045 ClpP/crotonase-like domain superfamily CDA09_12790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12790 IPR003593 AAA+ ATPase domain CDA09_12790 IPR003439 ABC transporter-like CDA09_12790 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl CDA09_12790 IPR017871 ABC transporter, conserved site CDA09_12795 IPR030802 ABC transporter permease MalE CDA09_12795 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CDA09_12800 IPR003695 Ppx/GppA phosphatase CDA09_12800 IPR030673 Pyrophosphatase, GppA/Ppx-type CDA09_12800 IPR022371 Exopolyphosphatase CDA09_12805 IPR036830 Polyphosphate kinase middle domain superfamily CDA09_12805 IPR036832 Polyphosphate kinase N-terminal domain superfamily CDA09_12805 IPR041108 Polyphosphate kinase, C-terminal domain 1 CDA09_12805 IPR025200 Polyphosphate kinase C-terminal domain 2 CDA09_12805 IPR003414 Polyphosphate kinase CDA09_12805 IPR024953 Polyphosphate kinase middle domain CDA09_12805 IPR025198 Polyphosphate kinase N-terminal domain CDA09_12810 IPR003607 HD/PDEase domain CDA09_12810 IPR004095 TGS CDA09_12810 IPR004811 RelA/SpoT family CDA09_12810 IPR012676 TGS-like CDA09_12810 IPR002912 ACT domain CDA09_12810 IPR012675 Beta-grasp domain superfamily CDA09_12810 IPR007685 RelA/SpoT CDA09_12810 IPR033655 RelA, TGS domain CDA09_12840 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily CDA09_12840 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CDA09_12840 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CDA09_12845 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_12845 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CDA09_12845 IPR034683 Cytidylyltransferase IspD/TarI CDA09_12845 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CDA09_12855 IPR002737 MEMO1 family CDA09_12860 IPR023473 AMMECR1 CDA09_12860 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CDA09_12860 IPR027485 AMMECR1, N-terminal CDA09_12860 IPR027623 AmmeMemoRadiSam system protein A CDA09_12860 IPR036071 AMMECR1 domain superfamily CDA09_12860 IPR002733 AMMECR1 domain CDA09_12860 IPR023472 Uncharacterised protein family MJ0810 CDA09_12865 IPR030905 Choline TMA-lyase-activating enzyme CDA09_12865 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_12865 IPR013785 Aldolase-type TIM barrel CDA09_12865 IPR007197 Radical SAM CDA09_12865 IPR040074 BssD/PflA/YjjW CDA09_12865 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_12865 IPR012839 Organic radical enzyme activase CDA09_12865 IPR034457 Organic radical-activating enzymes CDA09_12865 IPR001989 Radical-activating enzyme, conserved site CDA09_12870 IPR029058 Alpha/Beta hydrolase fold CDA09_12870 IPR000836 Phosphoribosyltransferase domain CDA09_12870 IPR002925 Dienelactone hydrolase CDA09_12870 IPR029057 Phosphoribosyltransferase-like CDA09_12875 IPR005118 Transcription-repair-coupling factor, C-terminal domain CDA09_12875 IPR001650 Helicase, C-terminal CDA09_12875 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_12875 IPR011545 DEAD/DEAH box helicase domain CDA09_12875 IPR004576 Transcription-repair coupling factor CDA09_12875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12875 IPR036101 CarD-like/TRCF domain superfamily CDA09_12875 IPR003711 CarD-like/TRCF domain CDA09_12875 IPR041471 UvrB, interaction domain CDA09_12875 IPR037235 TRCF-like, C-terminal domain CDA09_12890 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_12890 IPR005666 Sulphate transport system permease protein 1 CDA09_12890 IPR024765 TOBE-like domain CDA09_12890 IPR041193 CysA, C-terminal regulatory domain CDA09_12890 IPR003439 ABC transporter-like CDA09_12890 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CDA09_12890 IPR003593 AAA+ ATPase domain CDA09_12890 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_12890 IPR017871 ABC transporter, conserved site CDA09_12895 IPR011866 Sulphate ABC transporter, permease protein CysW CDA09_12895 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_12895 IPR035906 MetI-like superfamily CDA09_12895 IPR005667 Sulphate ABC transporter permease protein 2 CDA09_12900 IPR035906 MetI-like superfamily CDA09_12900 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_12900 IPR011865 Sulphate ABC transporter, permease protein CysT CDA09_12900 IPR005667 Sulphate ABC transporter permease protein 2 CDA09_12905 IPR005669 Thiosulphate/Sulfate-binding protein CDA09_12905 IPR034408 Sulphate/thiosulphate-binding site CDA09_12905 IPR000957 Sulphate/thiosulphate-binding, conserved site CDA09_12915 IPR023380 DsbB-like superfamily CDA09_12915 IPR012187 Disulphide bond formation protein BdbC CDA09_12915 IPR003752 Disulphide bond formation protein DsbB/BdbC CDA09_12925 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDA09_12925 IPR023480 Uncharacterised protein family UPF0312/YceI CDA09_12925 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDA09_12940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_12940 IPR035891 CheY-binding domain of CheA CDA09_12940 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding CDA09_12940 IPR004105 Histidine kinase CheA-like, homodimeric domain CDA09_12940 IPR036061 CheW-like domain superfamily CDA09_12940 IPR002545 CheW-like domain CDA09_12940 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDA09_12940 IPR036641 HPT domain superfamily CDA09_12940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_12940 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_12940 IPR005467 Histidine kinase domain CDA09_12945 IPR001789 Signal transduction response regulator, receiver domain CDA09_12945 IPR011006 CheY-like superfamily CDA09_12955 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily CDA09_12955 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal CDA09_12955 IPR021826 Domain of unknown function DUF3412 CDA09_12955 IPR031100 LOG family CDA09_12975 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CDA09_12975 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site CDA09_12975 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CDA09_12975 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit CDA09_12985 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CDA09_12985 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CDA09_12985 IPR009051 Alpha-helical ferredoxin CDA09_12985 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_12985 IPR012675 Beta-grasp domain superfamily CDA09_12985 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_12985 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_12985 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_12990 IPR018490 Cyclic nucleotide-binding-like CDA09_12990 IPR012318 Crp-type HTH domain CDA09_12990 IPR014710 RmlC-like jelly roll fold CDA09_12990 IPR018335 Transcription regulator HTH, Crp-type, conserved site CDA09_12990 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_12990 IPR000595 Cyclic nucleotide-binding domain CDA09_12990 IPR036390 Winged helix DNA-binding domain superfamily CDA09_12995 IPR000813 7Fe ferredoxin CDA09_12995 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_12995 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_12995 IPR022569 Ferredoxin, C-terminal CDA09_13005 IPR001633 EAL domain CDA09_13005 IPR000160 GGDEF domain CDA09_13005 IPR035919 EAL domain superfamily CDA09_13005 IPR005330 MHYT domain CDA09_13005 IPR029787 Nucleotide cyclase CDA09_13015 IPR006690 Outer membrane protein, OmpA-like, conserved site CDA09_13015 IPR006665 OmpA-like domain CDA09_13015 IPR006664 Outer membrane protein, bacterial CDA09_13015 IPR036737 OmpA-like domain superfamily CDA09_13040 IPR000330 SNF2-related, N-terminal domain CDA09_13040 IPR038718 SNF2-like, N-terminal domain superfamily CDA09_13040 IPR001650 Helicase, C-terminal CDA09_13040 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_13040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13060 IPR021804 Protein of unknown function DUF3375 CDA09_13070 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative CDA09_13075 IPR022310 NAD/GMP synthase CDA09_13075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_13075 IPR025777 GMP synthetase ATP pyrophosphatase domain CDA09_13075 IPR029062 Class I glutamine amidotransferase-like CDA09_13075 IPR017926 Glutamine amidotransferase CDA09_13075 IPR001674 GMP synthase, C-terminal CDA09_13075 IPR022955 GMP synthase CDA09_13075 IPR004739 GMP synthase, glutamine amidotransferase CDA09_13080 IPR005990 Inosine-5'-monophosphate dehydrogenase CDA09_13080 IPR013785 Aldolase-type TIM barrel CDA09_13080 IPR000644 CBS domain CDA09_13080 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CDA09_13080 IPR001093 IMP dehydrogenase/GMP reductase CDA09_13090 IPR037021 RnfH superfamily CDA09_13090 IPR005346 RnfH protein CDA09_13090 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_13095 IPR005031 Coenzyme Q-binding protein COQ10, START domain CDA09_13095 IPR023393 START-like domain superfamily CDA09_13100 IPR000037 SsrA-binding protein CDA09_13100 IPR023620 Small protein B CDA09_13100 IPR020081 SsrA-binding protein, conserved site CDA09_13105 IPR003846 Protein adenylyltransferase SelO CDA09_13110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_13110 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDA09_13110 IPR035906 MetI-like superfamily CDA09_13115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_13115 IPR035906 MetI-like superfamily CDA09_13120 IPR039424 Solute-binding protein family 5 CDA09_13120 IPR000914 Solute-binding protein family 5 domain CDA09_13120 IPR023765 Solute-binding protein family 5, conserved site CDA09_13120 IPR030678 Peptide/nickel binding protein, MppA-type CDA09_13125 IPR036291 NAD(P)-binding domain superfamily CDA09_13125 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) CDA09_13125 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13130 IPR008880 Trigger factor, C-terminal CDA09_13130 IPR037041 Trigger factor, C-terminal domain superfamily CDA09_13130 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CDA09_13130 IPR023059 Foldase protein PrsA CDA09_13130 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CDA09_13130 IPR027304 Trigger factor/SurA domain superfamily CDA09_13135 IPR003593 AAA+ ATPase domain CDA09_13135 IPR017730 Chaperonin ClpB CDA09_13135 IPR004176 Clp, N-terminal CDA09_13135 IPR019489 Clp ATPase, C-terminal CDA09_13135 IPR036628 Clp, N-terminal domain superfamily CDA09_13135 IPR041546 ClpA/ClpB, AAA lid domain CDA09_13135 IPR028299 ClpA/B, conserved site 2 CDA09_13135 IPR018368 ClpA/B, conserved site 1 CDA09_13135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13135 IPR003959 ATPase, AAA-type, core CDA09_13135 IPR001270 ClpA/B family CDA09_13145 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily CDA09_13145 IPR003448 Molybdopterin biosynthesis MoaE CDA09_13150 IPR003749 Sulfur carrier ThiS/MoaD-like CDA09_13150 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_13150 IPR012675 Beta-grasp domain superfamily CDA09_13155 IPR005110 MoeA, N-terminal and linker domain CDA09_13155 IPR036425 MoaB/Mog-like domain superfamily CDA09_13155 IPR036688 MoeA, C-terminal, domain IV superfamily CDA09_13155 IPR005111 MoeA, C-terminal, domain IV CDA09_13155 IPR008284 Molybdenum cofactor biosynthesis, conserved site CDA09_13155 IPR001453 MoaB/Mog domain CDA09_13155 IPR038987 Molybdopterin biosynthesis protein MoeA-like CDA09_13155 IPR036135 MoeA, N-terminal and linker domain superfamily CDA09_13160 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain CDA09_13160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13170 IPR006555 ATP-dependent helicase, C-terminal CDA09_13170 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_13170 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CDA09_13170 IPR006935 Helicase/UvrB, N-terminal CDA09_13180 IPR006258 Dihydrolipoamide dehydrogenase CDA09_13180 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CDA09_13180 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDA09_13180 IPR023753 FAD/NAD(P)-binding domain CDA09_13180 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13180 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CDA09_13180 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CDA09_13185 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDA09_13185 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CDA09_13185 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CDA09_13185 IPR000089 Biotin/lipoyl attachment CDA09_13185 IPR004167 Peripheral subunit-binding domain CDA09_13185 IPR036625 E3-binding domain superfamily CDA09_13185 IPR011053 Single hybrid motif CDA09_13185 IPR006255 Dihydrolipoamide succinyltransferase CDA09_13190 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain CDA09_13190 IPR011603 2-oxoglutarate dehydrogenase E1 component CDA09_13190 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal CDA09_13190 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily CDA09_13190 IPR001017 Dehydrogenase, E1 component CDA09_13190 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_13190 IPR029061 Thiamin diphosphate-binding fold CDA09_13195 IPR002020 Citrate synthase CDA09_13195 IPR016142 Citrate synthase-like, large alpha subdomain CDA09_13195 IPR036969 Citrate synthase superfamily CDA09_13195 IPR010953 Citrate synthase, type I CDA09_13195 IPR016143 Citrate synthase-like, small alpha subdomain CDA09_13195 IPR019810 Citrate synthase active site CDA09_13195 IPR024176 Citrate synthase, bacterial-type CDA09_13200 IPR036714 Flavinator of succinate dehydrogenase superfamily CDA09_13200 IPR005631 Flavinator of succinate dehydrogenase CDA09_13205 IPR009051 Alpha-helical ferredoxin CDA09_13205 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_13205 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_13205 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_13205 IPR012675 Beta-grasp domain superfamily CDA09_13205 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CDA09_13205 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_13205 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CDA09_13210 IPR011281 Succinate dehydrogenase, flavoprotein subunit CDA09_13210 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CDA09_13210 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CDA09_13210 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CDA09_13210 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13210 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CDA09_13210 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CDA09_13210 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CDA09_13225 IPR011663 UbiC transcription regulator-associated CDA09_13225 IPR000524 Transcription regulator HTH, GntR CDA09_13225 IPR036390 Winged helix DNA-binding domain superfamily CDA09_13225 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_13225 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDA09_13230 IPR022383 Lactate/malate dehydrogenase, C-terminal CDA09_13230 IPR036291 NAD(P)-binding domain superfamily CDA09_13230 IPR010945 Malate dehydrogenase, type 2 CDA09_13230 IPR001557 L-lactate/malate dehydrogenase CDA09_13230 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CDA09_13230 IPR001236 Lactate/malate dehydrogenase, N-terminal CDA09_13240 IPR012340 Nucleic acid-binding, OB-fold CDA09_13240 IPR006196 RNA-binding domain, S1, IF1 type CDA09_13240 IPR022967 RNA-binding domain, S1 CDA09_13240 IPR004368 Translation initiation factor IF-1 CDA09_13245 IPR011990 Tetratricopeptide-like helical domain superfamily CDA09_13245 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDA09_13245 IPR029787 Nucleotide cyclase CDA09_13245 IPR019734 Tetratricopeptide repeat CDA09_13245 IPR013026 Tetratricopeptide repeat-containing domain CDA09_13255 IPR026045 Ferric binding protein CDA09_13255 IPR006059 Bacterial extracellular solute-binding protein CDA09_13270 IPR035906 MetI-like superfamily CDA09_13270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_13275 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_13275 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13275 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CDA09_13275 IPR013611 Transport-associated OB, type 2 CDA09_13275 IPR003439 ABC transporter-like CDA09_13275 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CDA09_13275 IPR003593 AAA+ ATPase domain CDA09_13275 IPR017871 ABC transporter, conserved site CDA09_13280 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase CDA09_13280 IPR016181 Acyl-CoA N-acyltransferase CDA09_13280 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal CDA09_13285 IPR030700 N-end rule aminoacyl transferase CDA09_13285 IPR016181 Acyl-CoA N-acyltransferase CDA09_13285 IPR017138 Aspartate/glutamate leucyltransferase CDA09_13285 IPR007471 N-end aminoacyl transferase, N-terminal CDA09_13285 IPR007472 N-end rule aminoacyl transferase, C-terminal CDA09_13290 IPR005720 Dihydroorotate dehydrogenase domain CDA09_13290 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CDA09_13290 IPR005719 Dihydroorotate dehydrogenase, class 2 CDA09_13290 IPR001295 Dihydroorotate dehydrogenase, conserved site CDA09_13290 IPR013785 Aldolase-type TIM barrel CDA09_13295 IPR003667 NqrDE/RnfAE CDA09_13295 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA CDA09_13300 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria CDA09_13300 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB CDA09_13300 IPR007202 4Fe-4S domain CDA09_13300 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_13300 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_13305 IPR019554 Soluble ligand binding domain CDA09_13305 IPR026902 RnfC Barrel sandwich hybrid domain CDA09_13305 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CDA09_13305 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_13305 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC CDA09_13305 IPR009051 Alpha-helical ferredoxin CDA09_13305 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CDA09_13305 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_13310 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD CDA09_13310 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D CDA09_13315 IPR007329 FMN-binding CDA09_13315 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG CDA09_13320 IPR003667 NqrDE/RnfAE CDA09_13320 IPR010968 Ion-translocating oxidoreductase complex subunit E CDA09_13325 IPR004035 Endonuclease III, iron-sulphur binding site CDA09_13325 IPR004036 Endonuclease III-like, conserved site-2 CDA09_13325 IPR005759 Endonuclease III CDA09_13325 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CDA09_13325 IPR000445 Helix-hairpin-helix motif CDA09_13325 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CDA09_13325 IPR011257 DNA glycosylase CDA09_13325 IPR003265 HhH-GPD domain CDA09_13335 IPR003593 AAA+ ATPase domain CDA09_13335 IPR041569 AAA ATPase, AAA+ lid domain CDA09_13335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13335 IPR000642 Peptidase M41 CDA09_13335 IPR005936 Peptidase, FtsH CDA09_13335 IPR037219 Peptidase M41-like CDA09_13335 IPR003959 ATPase, AAA-type, core CDA09_13335 IPR003960 ATPase, AAA-type, conserved site CDA09_13350 IPR023861 Chloride channel, ClcA CDA09_13350 IPR014743 Chloride channel, core CDA09_13350 IPR001807 Chloride channel, voltage gated CDA09_13355 IPR020575 Heat shock protein Hsp90, N-terminal CDA09_13355 IPR037196 HSP90, C-terminal domain CDA09_13355 IPR001404 Heat shock protein Hsp90 family CDA09_13355 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_13355 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_13355 IPR019805 Heat shock protein Hsp90, conserved site CDA09_13355 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_13360 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CDA09_13360 IPR006358 Transcription elongation factor GreB CDA09_13360 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CDA09_13360 IPR028624 Transcription elongation factor GreA/GreB CDA09_13360 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CDA09_13360 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CDA09_13360 IPR023459 Transcription elongation factor GreA/GreB family CDA09_13360 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CDA09_13400 IPR016039 Thiolase-like CDA09_13400 IPR000794 Beta-ketoacyl synthase CDA09_13400 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDA09_13400 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CDA09_13400 IPR018201 Beta-ketoacyl synthase, active site CDA09_13400 IPR014031 Beta-ketoacyl synthase, C-terminal CDA09_13400 IPR014030 Beta-ketoacyl synthase, N-terminal CDA09_13415 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13415 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative CDA09_13415 IPR036291 NAD(P)-binding domain superfamily CDA09_13435 IPR035959 RutC-like superfamily CDA09_13435 IPR031038 Chorismatase, FkbO/Hyg5 family CDA09_13440 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13440 IPR036291 NAD(P)-binding domain superfamily CDA09_13455 IPR039418 LexA-like CDA09_13455 IPR006197 Peptidase S24, LexA-like CDA09_13455 IPR006200 Transcription regulator LexA CDA09_13455 IPR015927 Peptidase S24/S26A/S26B/S26C CDA09_13455 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_13455 IPR036286 LexA/Signal peptidase-like superfamily CDA09_13455 IPR006199 LexA repressor, DNA-binding domain CDA09_13455 IPR036390 Winged helix DNA-binding domain superfamily CDA09_13475 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CDA09_13475 IPR003346 Transposase, IS116/IS110/IS902 CDA09_13495 IPR001270 ClpA/B family CDA09_13495 IPR002611 IstB-like ATP-binding protein CDA09_13495 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CDA09_13495 IPR003593 AAA+ ATPase domain CDA09_13495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13500 IPR001584 Integrase, catalytic core CDA09_13500 IPR017894 HTH domain, IS21 transposase-type CDA09_13510 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13510 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_13510 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_13510 IPR036291 NAD(P)-binding domain superfamily CDA09_13515 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CDA09_13515 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CDA09_13515 IPR020875 3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit CDA09_13515 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDA09_13515 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CDA09_13515 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CDA09_13520 IPR032710 NTF2-like domain superfamily CDA09_13520 IPR000391 Ring-hydroxylating dioxygenase beta subunit CDA09_13530 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13540 IPR036259 MFS transporter superfamily CDA09_13540 IPR011701 Major facilitator superfamily CDA09_13540 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CDA09_13540 IPR020846 Major facilitator superfamily domain CDA09_13540 IPR004734 Multidrug resistance protein CDA09_13555 IPR036291 NAD(P)-binding domain superfamily CDA09_13555 IPR004627 L-threonine 3-dehydrogenase CDA09_13555 IPR013149 Alcohol dehydrogenase, C-terminal CDA09_13555 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDA09_13555 IPR011032 GroES-like superfamily CDA09_13555 IPR013154 Alcohol dehydrogenase, N-terminal CDA09_13560 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_13560 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13560 IPR036291 NAD(P)-binding domain superfamily CDA09_13565 IPR029045 ClpP/crotonase-like domain superfamily CDA09_13565 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_13565 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_13565 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_13585 IPR010752 Protein of unknown function DUF1329 CDA09_13595 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13595 IPR036291 NAD(P)-binding domain superfamily CDA09_13595 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_13600 IPR020613 Thiolase, conserved site CDA09_13600 IPR002155 Thiolase CDA09_13600 IPR020616 Thiolase, N-terminal CDA09_13600 IPR016039 Thiolase-like CDA09_13600 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_13600 IPR020610 Thiolase, active site CDA09_13600 IPR020617 Thiolase, C-terminal CDA09_13605 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDA09_13605 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDA09_13605 IPR022694 3-hydroxyacyl-CoA dehydrogenase CDA09_13605 IPR036291 NAD(P)-binding domain superfamily CDA09_13605 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CDA09_13605 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_13605 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CDA09_13610 IPR011234 Fumarylacetoacetase-like, C-terminal CDA09_13610 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CDA09_13610 IPR000403 Phosphatidylinositol 3-/4-kinase, catalytic domain CDA09_13625 IPR036291 NAD(P)-binding domain superfamily CDA09_13625 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_13625 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13625 IPR014007 Acetoin reductase CDA09_13635 IPR028202 Reductase, C-terminal CDA09_13635 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CDA09_13635 IPR023753 FAD/NAD(P)-binding domain CDA09_13635 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13640 IPR018298 Adrenodoxin, iron-sulphur binding site CDA09_13640 IPR001055 Adrenodoxin CDA09_13640 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_13640 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_13640 IPR012675 Beta-grasp domain superfamily CDA09_13645 IPR020846 Major facilitator superfamily domain CDA09_13645 IPR036259 MFS transporter superfamily CDA09_13645 IPR004741 Oxalate/formate antiporter family transporter CDA09_13645 IPR011701 Major facilitator superfamily CDA09_13650 IPR000391 Ring-hydroxylating dioxygenase beta subunit CDA09_13650 IPR023712 3-phenylpropionate/cinnamic acid dioxygenase, beta subunit CDA09_13650 IPR032710 NTF2-like domain superfamily CDA09_13655 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDA09_13655 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CDA09_13655 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CDA09_13655 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CDA09_13655 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CDA09_13660 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CDA09_13660 IPR011234 Fumarylacetoacetase-like, C-terminal CDA09_13665 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_13665 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13665 IPR036291 NAD(P)-binding domain superfamily CDA09_13695 IPR036291 NAD(P)-binding domain superfamily CDA09_13695 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13700 IPR037523 Vicinal oxygen chelate (VOC) domain CDA09_13700 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II CDA09_13700 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_13700 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_13720 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal CDA09_13720 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CDA09_13720 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_13720 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CDA09_13720 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CDA09_13720 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_13720 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDA09_13725 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_13725 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CDA09_13725 IPR012255 Electron transfer flavoprotein, beta subunit CDA09_13725 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDA09_13725 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CDA09_13735 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain CDA09_13735 IPR005119 LysR, substrate-binding CDA09_13735 IPR000847 Transcription regulator HTH, LysR CDA09_13735 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_13735 IPR036390 Winged helix DNA-binding domain superfamily CDA09_13745 IPR002104 Integrase, catalytic domain CDA09_13745 IPR010998 Integrase/recombinase, N-terminal CDA09_13745 IPR004107 Integrase, SAM-like, N-terminal CDA09_13745 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_13745 IPR013762 Integrase-like, catalytic domain superfamily CDA09_13750 IPR002104 Integrase, catalytic domain CDA09_13750 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_13750 IPR013762 Integrase-like, catalytic domain superfamily CDA09_13755 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_13755 IPR002104 Integrase, catalytic domain CDA09_13755 IPR013762 Integrase-like, catalytic domain superfamily CDA09_13755 IPR010998 Integrase/recombinase, N-terminal CDA09_13755 IPR004107 Integrase, SAM-like, N-terminal CDA09_13760 IPR007069 Transposase, IS801/IS1294 CDA09_13760 IPR026889 Transposase zinc-binding domain CDA09_13770 IPR013762 Integrase-like, catalytic domain superfamily CDA09_13770 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_13770 IPR010998 Integrase/recombinase, N-terminal CDA09_13770 IPR004107 Integrase, SAM-like, N-terminal CDA09_13770 IPR002104 Integrase, catalytic domain CDA09_13775 IPR013762 Integrase-like, catalytic domain superfamily CDA09_13775 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_13775 IPR002104 Integrase, catalytic domain CDA09_13780 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_13780 IPR013762 Integrase-like, catalytic domain superfamily CDA09_13780 IPR004107 Integrase, SAM-like, N-terminal CDA09_13780 IPR010998 Integrase/recombinase, N-terminal CDA09_13780 IPR002104 Integrase, catalytic domain CDA09_13790 IPR017894 HTH domain, IS21 transposase-type CDA09_13790 IPR001584 Integrase, catalytic core CDA09_13795 IPR001270 ClpA/B family CDA09_13795 IPR002611 IstB-like ATP-binding protein CDA09_13795 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13795 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CDA09_13795 IPR003593 AAA+ ATPase domain CDA09_13815 IPR001474 GTP cyclohydrolase I CDA09_13815 IPR018234 GTP cyclohydrolase I, conserved site CDA09_13815 IPR020602 GTP cyclohydrolase I domain CDA09_13820 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_13820 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_13820 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_13820 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_13820 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_13820 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_13820 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_13825 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_13825 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_13825 IPR029045 ClpP/crotonase-like domain superfamily CDA09_13825 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_13830 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_13830 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_13830 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_13830 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_13830 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_13830 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_13835 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_13835 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_13835 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_13835 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_13835 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_13835 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_13845 IPR036396 Cytochrome P450 superfamily CDA09_13845 IPR030904 Cytochrome P450, CypX CDA09_13845 IPR001128 Cytochrome P450 CDA09_13845 IPR002397 Cytochrome P450, B-class CDA09_13845 IPR017972 Cytochrome P450, conserved site CDA09_13850 IPR036291 NAD(P)-binding domain superfamily CDA09_13850 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_13850 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13865 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_13865 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_13865 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_13865 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_13865 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_13865 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_13870 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_13870 IPR036291 NAD(P)-binding domain superfamily CDA09_13870 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_13870 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_13875 IPR023606 CoA-transferase family III domain superfamily CDA09_13875 IPR003673 CoA-transferase family III CDA09_13895 IPR036396 Cytochrome P450 superfamily CDA09_13895 IPR001128 Cytochrome P450 CDA09_13895 IPR002397 Cytochrome P450, B-class CDA09_13895 IPR017972 Cytochrome P450, conserved site CDA09_13900 IPR013572 Transcription regulator MAATS, C-terminal CDA09_13900 IPR001647 DNA-binding HTH domain, TetR-type CDA09_13900 IPR009057 Homeobox-like domain superfamily CDA09_13900 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_13900 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_13905 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_13905 IPR014105 Carotenoid/retinoid oxidoreductase CDA09_13905 IPR002937 Amine oxidase CDA09_13905 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site CDA09_13915 IPR042099 AMP-dependent synthetase-like superfamily CDA09_13915 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_13915 IPR020845 AMP-binding, conserved site CDA09_13915 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC CDA09_13915 IPR000873 AMP-dependent synthetase/ligase CDA09_13925 IPR001633 EAL domain CDA09_13925 IPR005330 MHYT domain CDA09_13925 IPR000160 GGDEF domain CDA09_13925 IPR035919 EAL domain superfamily CDA09_13925 IPR029787 Nucleotide cyclase CDA09_13930 IPR032677 GTP cyclohydrolase II CDA09_13930 IPR036144 RibA-like superfamily CDA09_13930 IPR000926 GTP cyclohydrolase II, RibA CDA09_13975 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_13975 IPR025669 AAA domain CDA09_14085 IPR017937 Thioredoxin, conserved site CDA09_14085 IPR036249 Thioredoxin-like superfamily CDA09_14085 IPR012336 Thioredoxin-like fold CDA09_14085 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily CDA09_14085 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CDA09_14085 IPR033954 Disulphide bond isomerase, DsbC/G CDA09_14120 IPR001405 Uncharacterised protein family UPF0758 CDA09_14120 IPR020891 Uncharacterised protein family UPF0758, conserved site CDA09_14120 IPR037518 MPN domain CDA09_14120 IPR025657 RadC-like JAB domain CDA09_14120 IPR010994 RuvA domain 2-like CDA09_14140 IPR005330 MHYT domain CDA09_14140 IPR029787 Nucleotide cyclase CDA09_14140 IPR001633 EAL domain CDA09_14140 IPR035919 EAL domain superfamily CDA09_14140 IPR000160 GGDEF domain CDA09_14160 IPR009362 YhcG PDDEXK nuclease domain CDA09_14160 IPR041527 YhcG, N-terminal CDA09_14165 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CDA09_14165 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDA09_14165 IPR003356 DNA methylase, adenine-specific CDA09_14165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_14165 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CDA09_14170 IPR001650 Helicase, C-terminal CDA09_14170 IPR029464 Type I restriction enzyme R protein, N-terminal domain CDA09_14170 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_14170 IPR006935 Helicase/UvrB, N-terminal CDA09_14170 IPR013670 EcoEI R protein C-terminal domain CDA09_14170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14260 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CDA09_14260 IPR000962 Zinc finger, DksA/TraR C4-type CDA09_14260 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CDA09_14260 IPR012784 RNA polymerase-binding transcription factor DksA CDA09_14260 IPR037187 DksA, N-terminal domain superfamily CDA09_14265 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CDA09_14265 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CDA09_14265 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger CDA09_14270 IPR004088 K Homology domain, type 1 CDA09_14270 IPR036612 K Homology domain, type 1 superfamily CDA09_14270 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_14270 IPR012340 Nucleic acid-binding, OB-fold CDA09_14270 IPR012162 Polyribonucleotide nucleotidyltransferase CDA09_14270 IPR027408 PNPase/RNase PH domain superfamily CDA09_14270 IPR004087 K Homology domain CDA09_14270 IPR036345 Exoribonuclease, PH domain 2 superfamily CDA09_14270 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CDA09_14270 IPR022967 RNA-binding domain, S1 CDA09_14270 IPR003029 S1 domain CDA09_14270 IPR001247 Exoribonuclease, phosphorolytic domain 1 CDA09_14270 IPR015847 Exoribonuclease, phosphorolytic domain 2 CDA09_14275 IPR000589 Ribosomal protein S15 CDA09_14275 IPR005290 Ribosomal protein S15, bacterial-type CDA09_14275 IPR009068 S15/NS1, RNA-binding CDA09_14280 IPR032819 tRNA pseudouridylate synthase B, C-terminal CDA09_14280 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal CDA09_14280 IPR036974 PUA domain superfamily CDA09_14280 IPR015947 PUA-like superfamily CDA09_14280 IPR002501 Pseudouridine synthase II, N-terminal CDA09_14280 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDA09_14280 IPR014780 tRNA pseudouridine synthase II, TruB CDA09_14285 IPR000238 Ribosome-binding factor A CDA09_14285 IPR023799 Ribosome-binding factor A domain superfamily CDA09_14285 IPR015946 K homology domain-like, alpha/beta CDA09_14290 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CDA09_14290 IPR023115 Translation initiation factor IF- 2, domain 3 CDA09_14290 IPR000795 Transcription factor, GTP-binding domain CDA09_14290 IPR005225 Small GTP-binding protein domain CDA09_14290 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_14290 IPR000178 Translation initiation factor aIF-2, bacterial-like CDA09_14290 IPR009061 Putative DNA-binding domain superfamily CDA09_14290 IPR015760 Translation initiation factor IF- 2 CDA09_14290 IPR013575 Initiation factor 2 associated domain, bacterial CDA09_14290 IPR006847 Translation initiation factor IF-2, N-terminal CDA09_14290 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14295 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical CDA09_14295 IPR004087 K Homology domain CDA09_14295 IPR036555 NusA, N-terminal domain superfamily CDA09_14295 IPR010213 Transcription termination factor NusA CDA09_14295 IPR010214 Transcription termination factor NusA, C-terminal duplication CDA09_14295 IPR015946 K homology domain-like, alpha/beta CDA09_14295 IPR030842 Transcription termination/antitermination protein NusA, bacterial CDA09_14295 IPR013735 Transcription factor NusA, N-terminal CDA09_14295 IPR003029 S1 domain CDA09_14295 IPR012340 Nucleic acid-binding, OB-fold CDA09_14295 IPR009019 K homology domain superfamily, prokaryotic type CDA09_14295 IPR022967 RNA-binding domain, S1 CDA09_14295 IPR025249 KH domain, NusA-like CDA09_14300 IPR028989 Ribosome maturation factor RimP, N-terminal CDA09_14300 IPR003728 Ribosome maturation factor RimP CDA09_14300 IPR028998 Ribosome maturation factor RimP, C-terminal CDA09_14300 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CDA09_14300 IPR035956 RimP, N-terminal domain superfamily CDA09_14305 IPR036986 RNA-binding S4 domain superfamily CDA09_14305 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CDA09_14305 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CDA09_14305 IPR006145 Pseudouridine synthase, RsuA/RluA CDA09_14305 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDA09_14305 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CDA09_14305 IPR002942 RNA-binding S4 domain CDA09_14310 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14310 IPR005234 Chromosome segregation/condensation protein ScpB CDA09_14310 IPR036390 Winged helix DNA-binding domain superfamily CDA09_14315 IPR003768 Segregation and condensation protein A CDA09_14320 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDA09_14320 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_14320 IPR002306 Tryptophan-tRNA ligase CDA09_14320 IPR002305 Aminoacyl-tRNA synthetase, class Ic CDA09_14325 IPR008915 Peptidase M50 CDA09_14330 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDA09_14330 IPR006070 YrdC-like domain CDA09_14335 IPR004013 PHP domain CDA09_14335 IPR016195 Polymerase/histidinol phosphatase-like CDA09_14335 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDA09_14340 IPR022903 Glycine cleavage system T protein, bacteria CDA09_14340 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDA09_14340 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CDA09_14340 IPR006222 Aminomethyltransferase, folate-binding domain CDA09_14340 IPR006223 Glycine cleavage system T protein CDA09_14340 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDA09_14340 IPR028896 Aminomethyltransferase-like CDA09_14345 IPR011053 Single hybrid motif CDA09_14345 IPR000089 Biotin/lipoyl attachment CDA09_14345 IPR017453 Glycine cleavage system H-protein, subgroup CDA09_14345 IPR002930 Glycine cleavage system H-protein CDA09_14345 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDA09_14345 IPR033753 Glycine cleavage system H-protein/Simiate CDA09_14350 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_14350 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_14350 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_14350 IPR020581 Glycine cleavage system P protein CDA09_14350 IPR003437 Glycine dehydrogenase (decarboxylating) CDA09_14365 IPR009875 PilZ domain CDA09_14365 IPR003919 Cellulose synthase, subunit A CDA09_14365 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_14365 IPR001173 Glycosyltransferase 2-like CDA09_14365 IPR005150 Cellulose synthase CDA09_14370 IPR036390 Winged helix DNA-binding domain superfamily CDA09_14370 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14370 IPR000847 Transcription regulator HTH, LysR CDA09_14370 IPR005119 LysR, substrate-binding CDA09_14375 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDA09_14375 IPR017927 FAD-binding domain, ferredoxin reductase-type CDA09_14375 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_14375 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDA09_14375 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDA09_14375 IPR017938 Riboflavin synthase-like beta-barrel CDA09_14375 IPR033892 Ferredoxin--NADP reductase, bacteria CDA09_14385 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDA09_14385 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CDA09_14385 IPR000089 Biotin/lipoyl attachment CDA09_14385 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex CDA09_14385 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CDA09_14385 IPR004167 Peripheral subunit-binding domain CDA09_14385 IPR011053 Single hybrid motif CDA09_14385 IPR036625 E3-binding domain superfamily CDA09_14390 IPR005330 MHYT domain CDA09_14390 IPR001633 EAL domain CDA09_14390 IPR000160 GGDEF domain CDA09_14390 IPR035919 EAL domain superfamily CDA09_14390 IPR029787 Nucleotide cyclase CDA09_14395 IPR003593 AAA+ ATPase domain CDA09_14395 IPR032781 ABC-transporter extension domain CDA09_14395 IPR003439 ABC transporter-like CDA09_14395 IPR017871 ABC transporter, conserved site CDA09_14395 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14395 IPR022374 Energy-dependent translational throttle protein EttA CDA09_14400 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_14400 IPR001279 Metallo-beta-lactamase CDA09_14405 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_14405 IPR038770 Sodium/solute symporter superfamily CDA09_14405 IPR030151 K(+)/H(+) antiporter NhaP CDA09_14405 IPR006037 Regulator of K+ conductance, C-terminal CDA09_14405 IPR006153 Cation/H+ exchanger CDA09_14405 IPR036318 FAD-binding, type PCMH-like superfamily CDA09_14405 IPR005170 Transporter-associated domain CDA09_14405 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CDA09_14405 IPR023729 K(+)/H(+) antiporter NhaP2 CDA09_14420 IPR017871 ABC transporter, conserved site CDA09_14420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14420 IPR003439 ABC transporter-like CDA09_14420 IPR003838 ABC transporter permease protein domain CDA09_14420 IPR003593 AAA+ ATPase domain CDA09_14420 IPR017911 ABC transporter, macrolide export, ATP-binding domain CDA09_14420 IPR025857 MacB-like periplasmic core domain CDA09_14425 IPR017871 ABC transporter, conserved site CDA09_14425 IPR015854 ABC transporter, lipoprotein release, LolD CDA09_14425 IPR003439 ABC transporter-like CDA09_14425 IPR003593 AAA+ ATPase domain CDA09_14425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14435 IPR007895 MASE1 CDA09_14435 IPR001633 EAL domain CDA09_14435 IPR029787 Nucleotide cyclase CDA09_14435 IPR013655 PAS fold-3 CDA09_14435 IPR000014 PAS domain CDA09_14435 IPR000700 PAS-associated, C-terminal CDA09_14435 IPR035965 PAS domain superfamily CDA09_14435 IPR013656 PAS fold-4 CDA09_14435 IPR035919 EAL domain superfamily CDA09_14435 IPR001610 PAC motif CDA09_14435 IPR000160 GGDEF domain CDA09_14445 IPR008949 Isoprenoid synthase domain superfamily CDA09_14445 IPR019845 Squalene/phytoene synthase, conserved site CDA09_14445 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head CDA09_14445 IPR002060 Squalene/phytoene synthase CDA09_14450 IPR002937 Amine oxidase CDA09_14450 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_14450 IPR017830 Hydroxysqualene dehydroxylase HpnE CDA09_14455 IPR003593 AAA+ ATPase domain CDA09_14455 IPR003439 ABC transporter-like CDA09_14455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14455 IPR017871 ABC transporter, conserved site CDA09_14460 IPR036514 SGNH hydrolase superfamily CDA09_14460 IPR013830 SGNH hydrolase-type esterase domain CDA09_14465 IPR023061 Selenophosphate synthetase, class I CDA09_14465 IPR004536 Selenophosphate synthetase CDA09_14465 IPR010918 PurM-like, C-terminal domain CDA09_14465 IPR016188 PurM-like, N-terminal domain CDA09_14465 IPR036676 PurM-like, C-terminal domain superfamily CDA09_14465 IPR036921 PurM-like, N-terminal domain superfamily CDA09_14470 IPR001763 Rhodanese-like domain CDA09_14470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14470 IPR036873 Rhodanese-like domain superfamily CDA09_14470 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase CDA09_14475 IPR003593 AAA+ ATPase domain CDA09_14475 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_14475 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_14475 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_14475 IPR025944 Sigma-54 interaction domain, conserved site CDA09_14475 IPR011006 CheY-like superfamily CDA09_14475 IPR001789 Signal transduction response regulator, receiver domain CDA09_14475 IPR002197 DNA binding HTH domain, Fis-type CDA09_14475 IPR009057 Homeobox-like domain superfamily CDA09_14475 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_14480 IPR029151 Periplasmic sensor-like domain superfamily CDA09_14480 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_14480 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_14480 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_14480 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_14480 IPR005467 Histidine kinase domain CDA09_14485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14485 IPR017871 ABC transporter, conserved site CDA09_14485 IPR003439 ABC transporter-like CDA09_14485 IPR036640 ABC transporter type 1, transmembrane domain superfamily CDA09_14485 IPR011527 ABC transporter type 1, transmembrane domain CDA09_14485 IPR039421 Type I protein exporter CDA09_14485 IPR003593 AAA+ ATPase domain CDA09_14495 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_14495 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_14495 IPR016160 Aldehyde dehydrogenase, cysteine active site CDA09_14495 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDA09_14495 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_14495 IPR010102 Succinate semialdehyde dehydrogenase CDA09_14495 IPR015590 Aldehyde dehydrogenase domain CDA09_14500 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CDA09_14500 IPR016181 Acyl-CoA N-acyltransferase CDA09_14500 IPR011761 ATP-grasp fold CDA09_14500 IPR013815 ATP-grasp fold, subdomain 1 CDA09_14500 IPR003781 CoA-binding CDA09_14500 IPR000182 GNAT domain CDA09_14500 IPR016102 Succinyl-CoA synthetase-like CDA09_14500 IPR036291 NAD(P)-binding domain superfamily CDA09_14510 IPR018974 Tex-like protein, N-terminal CDA09_14510 IPR037027 YqgF/RNase H-like domain superfamily CDA09_14510 IPR006641 YqgF/RNase H-like domain CDA09_14510 IPR041692 HHH domain 9 CDA09_14510 IPR012340 Nucleic acid-binding, OB-fold CDA09_14510 IPR012337 Ribonuclease H-like superfamily CDA09_14510 IPR010994 RuvA domain 2-like CDA09_14510 IPR022967 RNA-binding domain, S1 CDA09_14510 IPR003029 S1 domain CDA09_14510 IPR023323 Tex-like domain superfamily CDA09_14510 IPR023319 Tex-like protein, HTH domain superfamily CDA09_14510 IPR032639 Tex protein, YqgF-like domain CDA09_14515 IPR006660 Arsenate reductase-like CDA09_14515 IPR006504 Transcriptional regulator Spx/MgsR CDA09_14515 IPR036249 Thioredoxin-like superfamily CDA09_14520 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily CDA09_14520 IPR016153 Heat shock protein Hsp33, N-terminal CDA09_14520 IPR000397 Heat shock protein Hsp33 CDA09_14520 IPR016154 Heat shock protein Hsp33, C-terminal CDA09_14525 IPR013033 Septum formation inhibitor MinC CDA09_14525 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily CDA09_14525 IPR007874 Septum formation inhibitor MinC, N-terminal CDA09_14525 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily CDA09_14525 IPR005526 Septum formation inhibitor MinC, C-terminal CDA09_14525 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CDA09_14530 IPR010223 ATP binding protein MinD, bacterial-type CDA09_14530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14530 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDA09_14530 IPR025501 ATP binding protein MinD CDA09_14535 IPR036707 Cell division topological specificity factor MinE superfamily CDA09_14535 IPR005527 Cell division topological specificity factor MinE CDA09_14540 IPR033479 Double Cache domain 1 CDA09_14540 IPR029151 Periplasmic sensor-like domain superfamily CDA09_14540 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDA09_14540 IPR003660 HAMP domain CDA09_14545 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CDA09_14545 IPR006195 Aminoacyl-tRNA synthetase, class II CDA09_14545 IPR002313 Lysine-tRNA ligase, class II CDA09_14545 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CDA09_14545 IPR012340 Nucleic acid-binding, OB-fold CDA09_14545 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CDA09_14550 IPR008471 MnmC-like methyltransferase CDA09_14550 IPR006076 FAD dependent oxidoreductase CDA09_14550 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_14550 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal CDA09_14550 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC CDA09_14555 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDA09_14555 IPR017203 Signal transduction histidine kinase, NreB CDA09_14555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_14555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_14555 IPR005467 Histidine kinase domain CDA09_14555 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_14560 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_14560 IPR001789 Signal transduction response regulator, receiver domain CDA09_14560 IPR000792 Transcription regulator LuxR, C-terminal CDA09_14560 IPR011006 CheY-like superfamily CDA09_14580 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CDA09_14580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14580 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_14580 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_14580 IPR025944 Sigma-54 interaction domain, conserved site CDA09_14580 IPR010523 Activator of aromatic catabolism CDA09_14580 IPR009057 Homeobox-like domain superfamily CDA09_14580 IPR002197 DNA binding HTH domain, Fis-type CDA09_14580 IPR004096 4-vinyl reductase, 4VR CDA09_14580 IPR003593 AAA+ ATPase domain CDA09_14580 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_14585 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CDA09_14585 IPR036637 Phosphohistidine domain superfamily CDA09_14585 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CDA09_14585 IPR020802 Polyketide synthase, thioesterase domain CDA09_14585 IPR009081 Phosphopantetheine binding ACP domain CDA09_14585 IPR006162 Phosphopantetheine attachment site CDA09_14585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_14585 IPR001031 Thioesterase CDA09_14585 IPR010071 Amino acid adenylation domain CDA09_14585 IPR010060 Non-ribosomal peptide synthase CDA09_14585 IPR013216 Methyltransferase type 11 CDA09_14585 IPR029058 Alpha/Beta hydrolase fold CDA09_14585 IPR008279 PEP-utilising enzyme, mobile domain CDA09_14585 IPR000253 Forkhead-associated (FHA) domain CDA09_14585 IPR001242 Condensation domain CDA09_14585 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_14585 IPR042099 AMP-dependent synthetase-like superfamily CDA09_14585 IPR036736 ACP-like superfamily CDA09_14585 IPR000873 AMP-dependent synthetase/ligase CDA09_14585 IPR020845 AMP-binding, conserved site CDA09_14590 IPR023151 PEP-utilising enzyme, conserved site CDA09_14590 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDA09_14590 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CDA09_14590 IPR013815 ATP-grasp fold, subdomain 1 CDA09_14590 IPR008279 PEP-utilising enzyme, mobile domain CDA09_14590 IPR006319 Phosphoenolpyruvate synthase CDA09_14590 IPR018274 PEP-utilising enzyme, active site CDA09_14590 IPR000121 PEP-utilising enzyme, C-terminal CDA09_14590 IPR036637 Phosphohistidine domain superfamily CDA09_14595 IPR000644 CBS domain CDA09_14600 IPR023677 UbiD decarboxylyase, bacteria CDA09_14600 IPR002830 UbiD decarboxylyase family CDA09_14605 IPR010023 KdsC family CDA09_14605 IPR036412 HAD-like superfamily CDA09_14605 IPR023214 HAD superfamily CDA09_14610 IPR002830 UbiD decarboxylyase family CDA09_14610 IPR032903 UbiD-like decarboxylase/ferulic acid decarboxylase 1 CDA09_14620 IPR023677 UbiD decarboxylyase, bacteria CDA09_14620 IPR002830 UbiD decarboxylyase family CDA09_14625 IPR004507 Flavin prenyltransferase UbiX-like CDA09_14625 IPR003382 Flavoprotein CDA09_14625 IPR036551 Flavin prenyltransferase-like CDA09_14635 IPR022925 NADH pyrophosphatase NudC CDA09_14635 IPR015797 NUDIX hydrolase-like domain superfamily CDA09_14635 IPR020084 NUDIX hydrolase, conserved site CDA09_14635 IPR000086 NUDIX hydrolase domain CDA09_14635 IPR015376 Zinc ribbon, NADH pyrophosphatase CDA09_14635 IPR015375 NADH pyrophosphatase-like, N-terminal CDA09_14645 IPR029052 Metallo-dependent phosphatase-like CDA09_14645 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) CDA09_14645 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CDA09_14660 IPR000086 NUDIX hydrolase domain CDA09_14660 IPR020084 NUDIX hydrolase, conserved site CDA09_14660 IPR015797 NUDIX hydrolase-like domain superfamily CDA09_14660 IPR022925 NADH pyrophosphatase NudC CDA09_14660 IPR015376 Zinc ribbon, NADH pyrophosphatase CDA09_14660 IPR015375 NADH pyrophosphatase-like, N-terminal CDA09_14685 IPR036390 Winged helix DNA-binding domain superfamily CDA09_14685 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_14685 IPR004839 Aminotransferase, class I/classII CDA09_14685 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_14685 IPR000524 Transcription regulator HTH, GntR CDA09_14685 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14690 IPR029787 Nucleotide cyclase CDA09_14690 IPR005330 MHYT domain CDA09_14690 IPR000160 GGDEF domain CDA09_14690 IPR001633 EAL domain CDA09_14690 IPR035919 EAL domain superfamily CDA09_14695 IPR001789 Signal transduction response regulator, receiver domain CDA09_14695 IPR011006 CheY-like superfamily CDA09_14700 IPR005467 Histidine kinase domain CDA09_14700 IPR013767 PAS fold CDA09_14700 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_14700 IPR035965 PAS domain superfamily CDA09_14700 IPR000014 PAS domain CDA09_14700 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_14700 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_14700 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_14700 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_14705 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_14705 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDA09_14705 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_14705 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_14705 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_14705 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_14705 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_14710 IPR036291 NAD(P)-binding domain superfamily CDA09_14710 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_14710 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_14715 IPR020617 Thiolase, C-terminal CDA09_14715 IPR020610 Thiolase, active site CDA09_14715 IPR016039 Thiolase-like CDA09_14715 IPR020613 Thiolase, conserved site CDA09_14715 IPR020616 Thiolase, N-terminal CDA09_14715 IPR002155 Thiolase CDA09_14715 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_14720 IPR029045 ClpP/crotonase-like domain superfamily CDA09_14720 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_14720 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_14720 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_14725 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_14725 IPR042099 AMP-dependent synthetase-like superfamily CDA09_14725 IPR000873 AMP-dependent synthetase/ligase CDA09_14725 IPR020845 AMP-binding, conserved site CDA09_14735 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_14735 IPR003439 ABC transporter-like CDA09_14735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14735 IPR017871 ABC transporter, conserved site CDA09_14735 IPR003593 AAA+ ATPase domain CDA09_14740 IPR003593 AAA+ ATPase domain CDA09_14740 IPR003439 ABC transporter-like CDA09_14740 IPR017871 ABC transporter, conserved site CDA09_14740 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14740 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_14750 IPR009057 Homeobox-like domain superfamily CDA09_14750 IPR001647 DNA-binding HTH domain, TetR-type CDA09_14750 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal CDA09_14750 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_14755 IPR029057 Phosphoribosyltransferase-like CDA09_14755 IPR002925 Dienelactone hydrolase CDA09_14755 IPR029058 Alpha/Beta hydrolase fold CDA09_14755 IPR000836 Phosphoribosyltransferase domain CDA09_14760 IPR035965 PAS domain superfamily CDA09_14760 IPR000014 PAS domain CDA09_14760 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_14760 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_14760 IPR005467 Histidine kinase domain CDA09_14760 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_14760 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_14760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_14760 IPR013767 PAS fold CDA09_14765 IPR000160 GGDEF domain CDA09_14765 IPR001633 EAL domain CDA09_14765 IPR035919 EAL domain superfamily CDA09_14765 IPR029787 Nucleotide cyclase CDA09_14765 IPR005330 MHYT domain CDA09_14770 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14770 IPR000847 Transcription regulator HTH, LysR CDA09_14770 IPR005119 LysR, substrate-binding CDA09_14770 IPR036390 Winged helix DNA-binding domain superfamily CDA09_14775 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CDA09_14775 IPR018136 Aconitase family, 4Fe-4S cluster binding site CDA09_14775 IPR036008 Aconitase, iron-sulfur domain CDA09_14775 IPR033941 3-Isopropylmalate dehydratase, catalytic domain CDA09_14775 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CDA09_14775 IPR004430 3-isopropylmalate dehydratase, large subunit CDA09_14780 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CDA09_14780 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDA09_14780 IPR004431 3-isopropylmalate dehydratase, small subunit CDA09_14780 IPR033940 3-isopropylmalate dehydratase, swivel domain CDA09_14785 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CDA09_14785 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDA09_14790 IPR002744 MIP18 family-like CDA09_14790 IPR034904 Fe-S cluster assembly domain superfamily CDA09_14795 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CDA09_14800 IPR010970 Cysteine desulfurase, SufS CDA09_14800 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_14800 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_14800 IPR000192 Aminotransferase class V domain CDA09_14800 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_14805 IPR000825 SUF system FeS cluster assembly, SufBD CDA09_14805 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CDA09_14805 IPR011542 SUF system FeS cluster assembly, SufD CDA09_14810 IPR017871 ABC transporter, conserved site CDA09_14810 IPR003593 AAA+ ATPase domain CDA09_14810 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14810 IPR010230 FeS cluster assembly SUF system, ATPase SufC CDA09_14810 IPR003439 ABC transporter-like CDA09_14815 IPR000825 SUF system FeS cluster assembly, SufBD CDA09_14815 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CDA09_14815 IPR010231 SUF system FeS cluster assembly, SufB CDA09_14820 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_14820 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_14820 IPR027065 Lon protease CDA09_14820 IPR008269 Peptidase S16, Lon proteolytic domain CDA09_14820 IPR041699 Lon protease, AAA domain CDA09_14825 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CDA09_14825 IPR006405 Nicotinate phosphoribosyltransferase pncB-type CDA09_14825 IPR007229 Nicotinate phosphoribosyltransferase family CDA09_14825 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain CDA09_14825 IPR013785 Aldolase-type TIM barrel CDA09_14825 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase CDA09_14830 IPR008914 Phosphatidylethanolamine-binding protein CDA09_14830 IPR005247 YbhB/YbcL CDA09_14830 IPR036610 PEBP-like superfamily CDA09_14850 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14850 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_14850 IPR000792 Transcription regulator LuxR, C-terminal CDA09_14855 IPR018900 Curli assembly protein CsgE CDA09_14860 IPR018893 Type VIII secretion system, CsgF CDA09_14865 IPR005534 Curli production assembly/transport component CsgG CDA09_14870 IPR005247 YbhB/YbcL CDA09_14870 IPR036610 PEBP-like superfamily CDA09_14870 IPR008914 Phosphatidylethanolamine-binding protein CDA09_14880 IPR018099 Purine phosphorylase, family 2, conserved site CDA09_14880 IPR035994 Nucleoside phosphorylase superfamily CDA09_14880 IPR000845 Nucleoside phosphorylase domain CDA09_14880 IPR010044 Methylthioadenosine phosphorylase (MTAP) CDA09_14890 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_14890 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CDA09_14890 IPR005835 Nucleotidyl transferase domain CDA09_14895 IPR004150 NAD-dependent DNA ligase, OB-fold CDA09_14895 IPR012340 Nucleic acid-binding, OB-fold CDA09_14895 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CDA09_14895 IPR013840 NAD-dependent DNA ligase, N-terminal CDA09_14895 IPR013839 NAD-dependent DNA ligase, adenylation CDA09_14895 IPR010994 RuvA domain 2-like CDA09_14895 IPR001679 NAD-dependent DNA ligase CDA09_14895 IPR033136 NAD-dependent DNA ligase, conserved site CDA09_14895 IPR018239 NAD-dependent DNA ligase, active site CDA09_14895 IPR041663 DisA/LigA, helix-hairpin-helix motif CDA09_14895 IPR036420 BRCT domain superfamily CDA09_14895 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CDA09_14895 IPR001357 BRCT domain CDA09_14900 IPR011919 Cell division protein ZipA CDA09_14900 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily CDA09_14900 IPR007449 ZipA, C-terminal FtsZ-binding domain CDA09_14905 IPR003395 RecF/RecN/SMC, N-terminal CDA09_14905 IPR024704 Structural maintenance of chromosomes protein CDA09_14905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14905 IPR011890 Structural maintenance of chromosomes protein, prokaryotic CDA09_14910 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ CDA09_14910 IPR004839 Aminotransferase, class I/classII CDA09_14910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_14910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_14910 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_14915 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family CDA09_14915 IPR001451 Hexapeptide repeat CDA09_14915 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 CDA09_14915 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily CDA09_14915 IPR011004 Trimeric LpxA-like superfamily CDA09_14915 IPR018357 Hexapeptide transferase, conserved site CDA09_14920 IPR003593 AAA+ ATPase domain CDA09_14920 IPR001482 Type II/IV secretion system protein CDA09_14920 IPR006321 Pilus retraction protein PilT CDA09_14920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14925 IPR036264 Bacterial exopeptidase dimerisation domain CDA09_14925 IPR011650 Peptidase M20, dimerisation domain CDA09_14925 IPR002933 Peptidase M20 CDA09_14925 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CDA09_14930 IPR007848 Methyltransferase small domain CDA09_14930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_14930 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase CDA09_14930 IPR004556 Methyltransferase HemK-like CDA09_14930 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDA09_14935 IPR007479 ISC system FeS cluster assembly, IscX CDA09_14935 IPR036762 IscX-like superfamily CDA09_14940 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_14940 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria CDA09_14940 IPR012675 Beta-grasp domain superfamily CDA09_14940 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_14940 IPR001055 Adrenodoxin CDA09_14940 IPR018298 Adrenodoxin, iron-sulphur binding site CDA09_14945 IPR018181 Heat shock protein 70, conserved site CDA09_14945 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CDA09_14945 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CDA09_14945 IPR042039 HscA chaperone, nucleotide-binding domain CDA09_14945 IPR013126 Heat shock protein 70 family CDA09_14945 IPR010236 ISC system FeS cluster assembly, HscA chaperone CDA09_14950 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain CDA09_14950 IPR036869 Chaperone J-domain superfamily CDA09_14950 IPR001623 DnaJ domain CDA09_14950 IPR004640 Co-chaperone Hsc20 CDA09_14950 IPR036386 HscB, C-terminal domain superfamily CDA09_14955 IPR035903 HesB-like domain superfamily CDA09_14955 IPR017870 FeS cluster insertion, C-terminal, conserved site CDA09_14955 IPR011302 Iron-binding protein IscA, proteobacteria CDA09_14955 IPR016092 FeS cluster insertion protein CDA09_14955 IPR000361 FeS cluster biogenesis CDA09_14960 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CDA09_14960 IPR011339 ISC system FeS cluster assembly, IscU scaffold CDA09_14965 IPR010240 Cysteine desulfurase IscS CDA09_14965 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_14965 IPR000192 Aminotransferase class V domain CDA09_14965 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CDA09_14965 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_14965 IPR016454 Cysteine desulfurase CDA09_14965 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_14970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_14970 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_14970 IPR016454 Cysteine desulfurase CDA09_14970 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal CDA09_14970 IPR010240 Cysteine desulfurase IscS CDA09_14970 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CDA09_14970 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_14970 IPR000192 Aminotransferase class V domain CDA09_14975 IPR010242 Transcription factor HTH, IscR CDA09_14975 IPR030489 Transcription regulator Rrf2-type, conserved site CDA09_14975 IPR036390 Winged helix DNA-binding domain superfamily CDA09_14975 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_14975 IPR000944 Transcription regulator Rrf2-type CDA09_14980 IPR005881 Serine O-acetyltransferase CDA09_14980 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CDA09_14980 IPR011004 Trimeric LpxA-like superfamily CDA09_14980 IPR001451 Hexapeptide repeat CDA09_14980 IPR018357 Hexapeptide transferase, conserved site CDA09_14985 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDA09_14985 IPR001537 tRNA/rRNA methyltransferase, SpoU type CDA09_14985 IPR004384 RNA methyltransferase TrmJ/LasT CDA09_14985 IPR029028 Alpha/beta knot methyltransferases CDA09_14990 IPR000760 Inositol monophosphatase-like CDA09_14990 IPR022337 Inositol monophosphatase, SuhB CDA09_14990 IPR033942 Inositol monophosphatase CDA09_14990 IPR020550 Inositol monophosphatase, conserved site CDA09_14990 IPR020583 Inositol monophosphatase, metal-binding site CDA09_14995 IPR011545 DEAD/DEAH box helicase domain CDA09_14995 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CDA09_14995 IPR034415 CsdA, RNA recognition motif CDA09_14995 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CDA09_14995 IPR001650 Helicase, C-terminal CDA09_14995 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_14995 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDA09_14995 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_14995 IPR014014 RNA helicase, DEAD-box type, Q motif CDA09_14995 IPR028618 ATP-dependent RNA helicase DeaD CDA09_15035 IPR001525 C-5 cytosine methyltransferase CDA09_15035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_15035 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CDA09_15035 IPR001387 Cro/C1-type helix-turn-helix domain CDA09_15035 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site CDA09_15035 IPR018117 DNA methylase, C-5 cytosine-specific, active site CDA09_15070 IPR001270 ClpA/B family CDA09_15070 IPR003593 AAA+ ATPase domain CDA09_15070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15070 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CDA09_15070 IPR002611 IstB-like ATP-binding protein CDA09_15075 IPR001584 Integrase, catalytic core CDA09_15075 IPR017894 HTH domain, IS21 transposase-type CDA09_15095 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_15095 IPR005119 LysR, substrate-binding CDA09_15095 IPR036390 Winged helix DNA-binding domain superfamily CDA09_15095 IPR000847 Transcription regulator HTH, LysR CDA09_15105 IPR003688 Type IV secretion system protein TraG/VirD4 CDA09_15105 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15115 IPR001482 Type II/IV secretion system protein CDA09_15115 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15115 IPR014149 Conjugative transfer, TrbB CDA09_15120 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CDA09_15130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15130 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CDA09_15130 IPR003593 AAA+ ATPase domain CDA09_15130 IPR004346 CagE, TrbE, VirB component of type IV transporter system CDA09_15150 IPR014142 P-type conjugative transfer protein TrbG CDA09_15150 IPR033645 VirB9/CagX/TrbG, C-terminal CDA09_15150 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CDA09_15150 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily CDA09_15155 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CDA09_15155 IPR042217 Type IV secretion system, VirB10/TrbI CDA09_15180 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial CDA09_15180 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CDA09_15180 IPR000462 CDP-alcohol phosphatidyltransferase CDA09_15185 IPR001162 UvrC family homology region CDA09_15185 IPR000305 GIY-YIG endonuclease CDA09_15185 IPR035901 GIY-YIG endonuclease superfamily CDA09_15185 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CDA09_15185 IPR010994 RuvA domain 2-like CDA09_15185 IPR001943 UVR domain CDA09_15185 IPR036876 UVR domain superfamily CDA09_15185 IPR004791 UvrABC system, subunit C CDA09_15185 IPR038476 UvrC homology region 2 superfamily CDA09_15190 IPR001764 Glycoside hydrolase, family 3, N-terminal CDA09_15190 IPR017853 Glycoside hydrolase superfamily CDA09_15190 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CDA09_15190 IPR022956 Beta-hexosaminidase, bacterial CDA09_15190 IPR019800 Glycoside hydrolase, family 3, active site CDA09_15195 IPR002582 Holo-[acyl carrier protein] synthase CDA09_15195 IPR004568 Phosphopantetheine-protein transferase domain CDA09_15195 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CDA09_15195 IPR008278 4'-phosphopantetheinyl transferase domain CDA09_15200 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ CDA09_15200 IPR036130 Pyridoxine 5'-phosphate synthase CDA09_15200 IPR013785 Aldolase-type TIM barrel CDA09_15205 IPR022572 DNA replication/recombination mediator RecO, N-terminal CDA09_15205 IPR037278 ARFGAP/RecO-like zinc finger CDA09_15205 IPR012340 Nucleic acid-binding, OB-fold CDA09_15205 IPR003717 Recombination protein O, RecO CDA09_15210 IPR006073 GTP binding domain CDA09_15210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15210 IPR030388 Era-type guanine nucleotide-binding (G) domain CDA09_15210 IPR005662 GTP-binding protein Era CDA09_15210 IPR005225 Small GTP-binding protein domain CDA09_15210 IPR009019 K homology domain superfamily, prokaryotic type CDA09_15210 IPR004044 K Homology domain, type 2 CDA09_15210 IPR015946 K homology domain-like, alpha/beta CDA09_15215 IPR011907 Ribonuclease III CDA09_15215 IPR000999 Ribonuclease III domain CDA09_15215 IPR014720 Double-stranded RNA-binding domain CDA09_15215 IPR036389 Ribonuclease III, endonuclease domain superfamily CDA09_15225 IPR019758 Peptidase S26A, signal peptidase I, conserved site CDA09_15225 IPR000223 Peptidase S26A, signal peptidase I CDA09_15225 IPR019756 Peptidase S26A, signal peptidase I, serine active site CDA09_15225 IPR019533 Peptidase S26 CDA09_15225 IPR036286 LexA/Signal peptidase-like superfamily CDA09_15225 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CDA09_15230 IPR006297 Elongation factor 4 CDA09_15230 IPR013842 GTP-binding protein LepA, C-terminal CDA09_15230 IPR000640 Elongation factor EFG, domain V-like CDA09_15230 IPR004161 Translation elongation factor EFTu-like, domain 2 CDA09_15230 IPR031157 Tr-type G domain, conserved site CDA09_15230 IPR038363 LepA, C-terminal domain superfamily CDA09_15230 IPR035654 Elongation factor 4, domain IV CDA09_15230 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15230 IPR005225 Small GTP-binding protein domain CDA09_15230 IPR035647 EF-G domain III/V-like CDA09_15230 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_15230 IPR000795 Transcription factor, GTP-binding domain CDA09_15240 IPR001478 PDZ domain CDA09_15240 IPR036034 PDZ superfamily CDA09_15240 IPR011782 Peptidase S1C, Do CDA09_15240 IPR009003 Peptidase S1, PA clan CDA09_15240 IPR001940 Peptidase S1C CDA09_15260 IPR014284 RNA polymerase sigma-70 like domain CDA09_15260 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CDA09_15260 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDA09_15260 IPR007627 RNA polymerase sigma-70 region 2 CDA09_15260 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_15260 IPR039425 RNA polymerase sigma-70 like CDA09_15260 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_15260 IPR013325 RNA polymerase sigma factor, region 2 CDA09_15260 IPR014286 RNA polymerase sigma-70 RpoE type CDA09_15265 IPR005288 L-aspartate oxidase CDA09_15265 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CDA09_15265 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CDA09_15265 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_15265 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CDA09_15265 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CDA09_15275 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CDA09_15275 IPR000794 Beta-ketoacyl synthase CDA09_15275 IPR018201 Beta-ketoacyl synthase, active site CDA09_15275 IPR014031 Beta-ketoacyl synthase, C-terminal CDA09_15275 IPR014030 Beta-ketoacyl synthase, N-terminal CDA09_15275 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDA09_15275 IPR016039 Thiolase-like CDA09_15280 IPR006162 Phosphopantetheine attachment site CDA09_15280 IPR009081 Phosphopantetheine binding ACP domain CDA09_15280 IPR003231 Acyl carrier protein (ACP) CDA09_15280 IPR036736 ACP-like superfamily CDA09_15285 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_15285 IPR036291 NAD(P)-binding domain superfamily CDA09_15285 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_15285 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_15290 IPR014043 Acyl transferase CDA09_15290 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_15290 IPR024925 Malonyl CoA-acyl carrier protein transacylase CDA09_15290 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CDA09_15290 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CDA09_15290 IPR001227 Acyl transferase domain superfamily CDA09_15295 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDA09_15295 IPR016039 Thiolase-like CDA09_15295 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CDA09_15295 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CDA09_15300 IPR012281 Phospholipid biosynthesis protein, PlsX-like CDA09_15300 IPR003664 Fatty acid synthesis PlsX protein CDA09_15305 IPR002677 Ribosomal protein L32p CDA09_15305 IPR011332 Zinc-binding ribosomal protein CDA09_15310 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CDA09_15310 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria CDA09_15315 IPR029001 Inosine triphosphate pyrophosphatase-like CDA09_15315 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CDA09_15320 IPR008189 rRNA small subunit methyltransferase I CDA09_15320 IPR014777 Tetrapyrrole methylase, subdomain 1 CDA09_15320 IPR035996 Tetrapyrrole methylase superfamily CDA09_15320 IPR000878 Tetrapyrrole methylase CDA09_15320 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CDA09_15320 IPR014776 Tetrapyrrole methylase, subdomain 2 CDA09_15330 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDA09_15330 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CDA09_15330 IPR006145 Pseudouridine synthase, RsuA/RluA CDA09_15330 IPR002942 RNA-binding S4 domain CDA09_15330 IPR006225 Pseudouridine synthase, RluC/RluD CDA09_15330 IPR036986 RNA-binding S4 domain superfamily CDA09_15335 IPR003029 S1 domain CDA09_15335 IPR021968 Polyribonucleotide phosphorylase C-terminal CDA09_15335 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CDA09_15335 IPR012340 Nucleic acid-binding, OB-fold CDA09_15335 IPR028878 Ribonuclease E CDA09_15335 IPR004659 Ribonuclease E/G CDA09_15335 IPR022967 RNA-binding domain, S1 CDA09_15340 IPR023485 Phosphotyrosine protein phosphatase I CDA09_15340 IPR036196 Phosphotyrosine protein phosphatase I superfamily CDA09_15340 IPR017867 Protein-tyrosine phosphatase, low molecular weight CDA09_15345 IPR001650 Helicase, C-terminal CDA09_15345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15345 IPR001943 UVR domain CDA09_15345 IPR036876 UVR domain superfamily CDA09_15345 IPR004807 UvrABC system, subunit B CDA09_15345 IPR041471 UvrB, interaction domain CDA09_15345 IPR024759 UvrB, YAD/RRR-motif-containing domain CDA09_15345 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_15345 IPR006935 Helicase/UvrB, N-terminal CDA09_15350 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CDA09_15350 IPR000796 Aspartate/other aminotransferase CDA09_15350 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_15350 IPR004839 Aminotransferase, class I/classII CDA09_15350 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_15350 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_15365 IPR041699 Lon protease, AAA domain CDA09_15365 IPR008269 Peptidase S16, Lon proteolytic domain CDA09_15365 IPR027065 Lon protease CDA09_15365 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_15365 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_15375 IPR013483 Molybdenum cofactor biosynthesis protein A CDA09_15375 IPR006638 Elp3/MiaB/NifB CDA09_15375 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CDA09_15375 IPR010505 Molybdenum cofactor synthesis C-terminal CDA09_15375 IPR007197 Radical SAM CDA09_15375 IPR013785 Aldolase-type TIM barrel CDA09_15390 IPR038766 Membrane component of ABC transporter, predicted CDA09_15395 IPR017439 Amidohydrolase CDA09_15395 IPR036264 Bacterial exopeptidase dimerisation domain CDA09_15395 IPR011650 Peptidase M20, dimerisation domain CDA09_15395 IPR002933 Peptidase M20 CDA09_15400 IPR000286 Histone deacetylase family CDA09_15400 IPR023801 Histone deacetylase domain CDA09_15400 IPR037138 Histone deacetylase domain superfamily CDA09_15400 IPR023696 Ureohydrolase domain superfamily CDA09_15410 IPR001130 TatD family CDA09_15410 IPR032466 Metal-dependent hydrolase CDA09_15410 IPR015991 Uncharacterised hydrolase TatD-type CDA09_15410 IPR018228 Deoxyribonuclease, TatD-related, conserved site CDA09_15420 IPR004622 DNA polymerase III, delta prime subunit CDA09_15420 IPR015199 DNA polymerase III, delta subunit, C-terminal CDA09_15420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15425 IPR018094 Thymidylate kinase CDA09_15425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15425 IPR039430 Thymidylate kinase-like domain CDA09_15430 IPR003770 Endolytic murein transglycosylase CDA09_15435 IPR017703 YgfZ/GcvT conserved site CDA09_15435 IPR023758 tRNA-modifying protein YgfZ CDA09_15435 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CDA09_15435 IPR006222 Aminomethyltransferase, folate-binding domain CDA09_15450 IPR038063 L,D-transpeptidase catalytic domain-like CDA09_15450 IPR041597 L,D-transpeptidase C-terminal domain CDA09_15450 IPR005490 L,D-transpeptidase catalytic domain CDA09_15455 IPR002125 Cytidine and deoxycytidylate deaminase domain CDA09_15455 IPR016192 APOBEC/CMP deaminase, zinc-binding CDA09_15455 IPR028883 tRNA-specific adenosine deaminase CDA09_15455 IPR016193 Cytidine deaminase-like CDA09_15505 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_15505 IPR006311 Twin-arginine translocation pathway, signal sequence CDA09_15505 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_15510 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_15510 IPR006657 Molybdopterin dinucleotide-binding domain CDA09_15510 IPR006656 Molybdopterin oxidoreductase CDA09_15510 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDA09_15515 IPR016193 Cytidine deaminase-like CDA09_15515 IPR003786 Sulfur carrier protein FdhD CDA09_15520 IPR013225 PaaX-like, C-terminal CDA09_15520 IPR012906 PaaX-like, N-terminal CDA09_15520 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_15520 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX CDA09_15525 IPR020846 Major facilitator superfamily domain CDA09_15525 IPR011701 Major facilitator superfamily CDA09_15525 IPR036259 MFS transporter superfamily CDA09_15535 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_15535 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_15540 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDA09_15540 IPR029061 Thiamin diphosphate-binding fold CDA09_15545 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CDA09_15545 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit CDA09_15545 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CDA09_15545 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CDA09_15545 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CDA09_15545 IPR029061 Thiamin diphosphate-binding fold CDA09_15545 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CDA09_15570 IPR015590 Aldehyde dehydrogenase domain CDA09_15570 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDA09_15570 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_15570 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_15570 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_15575 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily CDA09_15575 IPR016166 FAD-binding domain, PCMH-type CDA09_15575 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDA09_15575 IPR016167 FAD-binding, type PCMH, subdomain 1 CDA09_15575 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_15575 IPR016164 FAD-linked oxidase-like, C-terminal CDA09_15575 IPR004113 FAD-linked oxidase, C-terminal CDA09_15575 IPR006094 FAD linked oxidase, N-terminal CDA09_15575 IPR036318 FAD-binding, type PCMH-like superfamily CDA09_15590 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_15590 IPR011946 Integrase, integron-type CDA09_15590 IPR010998 Integrase/recombinase, N-terminal CDA09_15590 IPR004107 Integrase, SAM-like, N-terminal CDA09_15590 IPR013762 Integrase-like, catalytic domain superfamily CDA09_15590 IPR002104 Integrase, catalytic domain CDA09_15595 IPR004107 Integrase, SAM-like, N-terminal CDA09_15595 IPR010998 Integrase/recombinase, N-terminal CDA09_15595 IPR002104 Integrase, catalytic domain CDA09_15595 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_15595 IPR013762 Integrase-like, catalytic domain superfamily CDA09_15600 IPR007069 Transposase, IS801/IS1294 CDA09_15600 IPR026889 Transposase zinc-binding domain CDA09_15610 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CDA09_15610 IPR003346 Transposase, IS116/IS110/IS902 CDA09_15625 IPR011008 Dimeric alpha-beta barrel CDA09_15625 IPR007138 Antibiotic biosynthesis monooxygenase domain CDA09_15630 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_15630 IPR029045 ClpP/crotonase-like domain superfamily CDA09_15630 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_15630 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_15635 IPR004695 Voltage-dependent anion channel CDA09_15645 IPR003844 Uncharacterised protein family UPF0060 CDA09_15660 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15660 IPR011006 CheY-like superfamily CDA09_15660 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_15660 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_15660 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_15660 IPR001789 Signal transduction response regulator, receiver domain CDA09_15660 IPR009057 Homeobox-like domain superfamily CDA09_15660 IPR025944 Sigma-54 interaction domain, conserved site CDA09_15660 IPR003593 AAA+ ATPase domain CDA09_15665 IPR001789 Signal transduction response regulator, receiver domain CDA09_15665 IPR013656 PAS fold-4 CDA09_15665 IPR035965 PAS domain superfamily CDA09_15665 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_15665 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_15665 IPR011006 CheY-like superfamily CDA09_15665 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_15665 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_15665 IPR000014 PAS domain CDA09_15665 IPR005467 Histidine kinase domain CDA09_15665 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_15670 IPR036259 MFS transporter superfamily CDA09_15670 IPR020846 Major facilitator superfamily domain CDA09_15670 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family CDA09_15670 IPR011701 Major facilitator superfamily CDA09_15670 IPR005829 Sugar transporter, conserved site CDA09_15675 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_15675 IPR000873 AMP-dependent synthetase/ligase CDA09_15675 IPR011957 Benzoate-CoA ligase family CDA09_15685 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CDA09_15685 IPR003423 Outer membrane efflux protein CDA09_15690 IPR001036 Acriflavin resistance protein CDA09_15690 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_15690 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CDA09_15695 IPR006143 RND efflux pump, membrane fusion protein CDA09_15695 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_15700 IPR039538 BetI-type transcriptional repressor, C-terminal CDA09_15700 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_15700 IPR009057 Homeobox-like domain superfamily CDA09_15700 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_15700 IPR017757 Transcriptional repressor BetI CDA09_15700 IPR001647 DNA-binding HTH domain, TetR-type CDA09_15715 IPR002327 Cytochrome c, class IA/ IB CDA09_15715 IPR009056 Cytochrome c-like domain CDA09_15715 IPR036909 Cytochrome c-like domain superfamily CDA09_15720 IPR023635 Peptide deformylase CDA09_15720 IPR036821 Peptide deformylase superfamily CDA09_15730 IPR004574 Alkylated DNA repair protein AlkB CDA09_15730 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CDA09_15730 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily CDA09_15730 IPR005123 Oxoglutarate/iron-dependent dioxygenase CDA09_15740 IPR000119 Histone-like DNA-binding protein CDA09_15740 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CDA09_15740 IPR020816 Histone-like DNA-binding protein, conserved site CDA09_15745 IPR004815 Lon protease, bacterial/eukaryotic-type CDA09_15745 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_15745 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_15745 IPR003959 ATPase, AAA-type, core CDA09_15745 IPR015947 PUA-like superfamily CDA09_15745 IPR008268 Peptidase S16, active site CDA09_15745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15745 IPR008269 Peptidase S16, Lon proteolytic domain CDA09_15745 IPR003111 Lon, substrate-binding domain CDA09_15745 IPR003593 AAA+ ATPase domain CDA09_15745 IPR027065 Lon protease CDA09_15745 IPR027543 Lon protease, bacterial CDA09_15750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15750 IPR003959 ATPase, AAA-type, core CDA09_15750 IPR003593 AAA+ ATPase domain CDA09_15750 IPR010603 Zinc finger, ClpX C4-type CDA09_15750 IPR004487 Clp protease, ATP-binding subunit ClpX CDA09_15750 IPR038366 Zinc finger, ClpX C4-type superfamily CDA09_15750 IPR019489 Clp ATPase, C-terminal CDA09_15755 IPR001907 ATP-dependent Clp protease proteolytic subunit CDA09_15755 IPR029045 ClpP/crotonase-like domain superfamily CDA09_15755 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CDA09_15755 IPR033135 ClpP, histidine active site CDA09_15755 IPR018215 ClpP, Ser active site CDA09_15760 IPR008880 Trigger factor, C-terminal CDA09_15760 IPR037041 Trigger factor, C-terminal domain superfamily CDA09_15760 IPR008881 Trigger factor, ribosome-binding, bacterial CDA09_15760 IPR036611 Trigger factor ribosome-binding domain superfamily CDA09_15760 IPR027304 Trigger factor/SurA domain superfamily CDA09_15760 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDA09_15760 IPR005215 Trigger factor CDA09_15765 IPR013153 PrkA AAA domain CDA09_15765 IPR010650 PrkA C-terminal domain CDA09_15765 IPR016230 Serine-protein kinase, PrkA CDA09_15765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15770 IPR036465 von Willebrand factor A-like domain superfamily CDA09_15770 IPR006698 Uncharacterised protein family UPF0229 CDA09_15775 IPR007390 Sporulation stage V, protein R CDA09_15780 IPR004443 YjeF N-terminal domain CDA09_15780 IPR029056 Ribokinase-like CDA09_15780 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr CDA09_15780 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase CDA09_15780 IPR017953 Carbohydrate kinase, predicted, conserved site CDA09_15780 IPR036652 YjeF N-terminal domain superfamily CDA09_15785 IPR037522 HD-GYP domain CDA09_15785 IPR001789 Signal transduction response regulator, receiver domain CDA09_15785 IPR011006 CheY-like superfamily CDA09_15785 IPR003607 HD/PDEase domain CDA09_15790 IPR000620 EamA domain CDA09_15795 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CDA09_15795 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CDA09_15795 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily CDA09_15795 IPR004393 Nicotinate-nucleotide pyrophosphorylase CDA09_15795 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CDA09_15795 IPR013785 Aldolase-type TIM barrel CDA09_15795 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CDA09_15800 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CDA09_15800 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_15800 IPR004450 Threonine synthase-like CDA09_15800 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_15800 IPR029144 Threonine synthase, N-terminal CDA09_15800 IPR037158 Threonine synthase, N-terminal domain superfamily CDA09_15805 IPR019811 Homoserine dehydrogenase, conserved site CDA09_15805 IPR001342 Homoserine dehydrogenase, catalytic CDA09_15805 IPR016204 Homoserine dehydrogenase CDA09_15805 IPR036291 NAD(P)-binding domain superfamily CDA09_15805 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CDA09_15805 IPR002912 ACT domain CDA09_15810 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_15810 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_15810 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_15810 IPR004839 Aminotransferase, class I/classII CDA09_15820 IPR036249 Thioredoxin-like superfamily CDA09_15820 IPR013766 Thioredoxin domain CDA09_15820 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDA09_15825 IPR003714 PhoH-like protein CDA09_15825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15825 IPR002716 PIN domain CDA09_15825 IPR029060 PIN-like domain superfamily CDA09_15840 IPR000064 Endopeptidase, NLPC/P60 domain CDA09_15840 IPR038765 Papain-like cysteine peptidase superfamily CDA09_15845 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CDA09_15845 IPR029052 Metallo-dependent phosphatase-like CDA09_15845 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA CDA09_15855 IPR006164 Ku70/Ku80 beta-barrel domain CDA09_15855 IPR009187 Non-homologous end joining protein Ku, prokaryotic type CDA09_15855 IPR016194 SPOC-like, C-terminal domain superfamily CDA09_15860 IPR014146 DNA ligase D, ligase domain CDA09_15860 IPR012310 DNA ligase, ATP-dependent, central CDA09_15860 IPR033651 LigD polymerase domain, PaeLigD-type CDA09_15860 IPR014144 DNA ligase D, 3'-phosphoesterase domain CDA09_15860 IPR012309 DNA ligase, ATP-dependent, C-terminal CDA09_15860 IPR014145 DNA ligase D, polymerase domain CDA09_15860 IPR014143 DNA ligase D CDA09_15860 IPR012340 Nucleic acid-binding, OB-fold CDA09_15870 IPR018136 Aconitase family, 4Fe-4S cluster binding site CDA09_15870 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDA09_15870 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CDA09_15870 IPR036288 Aconitase B, HEAT-like domain superfamily CDA09_15870 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CDA09_15870 IPR015932 Aconitase, domain 2 CDA09_15870 IPR015933 Aconitase B, HEAT-like domain CDA09_15870 IPR004406 Aconitase B CDA09_15870 IPR036008 Aconitase, iron-sulfur domain CDA09_15870 IPR015929 Aconitase B, swivel CDA09_15875 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDA09_15875 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CDA09_15875 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CDA09_15875 IPR036008 Aconitase, iron-sulfur domain CDA09_15875 IPR018136 Aconitase family, 4Fe-4S cluster binding site CDA09_15875 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CDA09_15875 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CDA09_15880 IPR032710 NTF2-like domain superfamily CDA09_15880 IPR023006 Uncharacterised protein family UPF0225 CDA09_15905 IPR005358 Putative zinc- or iron-chelating domain containing protein CDA09_15915 IPR011978 Uncharacterised protein family UPF0149 CDA09_15915 IPR036255 YgfB-like superfamily CDA09_15915 IPR004027 SEC-C motif CDA09_15920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_15920 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CDA09_15925 IPR013785 Aldolase-type TIM barrel CDA09_15925 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal CDA09_15925 IPR032886 tRNA-dihydrouridine(16) synthase CDA09_15925 IPR001269 tRNA-dihydrouridine synthase CDA09_15925 IPR018517 tRNA-dihydrouridine synthase, conserved site CDA09_15925 IPR035587 DUS-like, FMN-binding domain CDA09_15930 IPR027491 Ribosomal protein L31 type A CDA09_15930 IPR002150 Ribosomal protein L31 CDA09_15930 IPR034704 L28p-like CDA09_15930 IPR042105 Ribosomal protein L31 superfamily CDA09_15940 IPR012337 Ribonuclease H-like superfamily CDA09_15940 IPR022894 Oligoribonuclease CDA09_15940 IPR036397 Ribonuclease H superfamily CDA09_15940 IPR013520 Exonuclease, RNase T/DNA polymerase III CDA09_15945 IPR027057 CAAX prenyl protease 1 CDA09_15945 IPR001915 Peptidase M48 CDA09_15945 IPR032456 CAAX prenyl protease 1, N-terminal CDA09_15950 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal CDA09_15950 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CDA09_15950 IPR012340 Nucleic acid-binding, OB-fold CDA09_15950 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_15950 IPR004881 Ribosome biogenesis GTPase RsgA CDA09_15950 IPR010914 RsgA GTPase domain CDA09_15955 IPR020610 Thiolase, active site CDA09_15955 IPR016039 Thiolase-like CDA09_15955 IPR002155 Thiolase CDA09_15955 IPR020617 Thiolase, C-terminal CDA09_15955 IPR020616 Thiolase, N-terminal CDA09_15955 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_15960 IPR004485 Cobalamin biosynthesis CobD/CbiB CDA09_15960 IPR031347 Protein AmpE CDA09_15965 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CDA09_15965 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type CDA09_15970 IPR005746 Thioredoxin CDA09_15970 IPR036249 Thioredoxin-like superfamily CDA09_15970 IPR013766 Thioredoxin domain CDA09_15970 IPR017937 Thioredoxin, conserved site CDA09_15975 IPR003732 D-aminoacyl-tRNA deacylase DTD CDA09_15975 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CDA09_15985 IPR001123 Amino acid exporter protein, LeuE-type CDA09_15985 IPR004778 Homoserine/Threonine efflux protein CDA09_15995 IPR036291 NAD(P)-binding domain superfamily CDA09_15995 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDA09_15995 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDA09_15995 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDA09_15995 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDA09_16005 IPR005119 LysR, substrate-binding CDA09_16005 IPR000847 Transcription regulator HTH, LysR CDA09_16005 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16005 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16010 IPR000362 Fumarate lyase family CDA09_16010 IPR018951 Fumarase C, C-terminal CDA09_16010 IPR008948 L-Aspartase-like CDA09_16010 IPR022761 Fumarate lyase, N-terminal CDA09_16010 IPR020557 Fumarate lyase, conserved site CDA09_16010 IPR004708 Aspartate ammonia-lyase CDA09_16010 IPR024083 Fumarase/histidase, N-terminal CDA09_16025 IPR015500 Peptidase S8, subtilisin-related CDA09_16025 IPR036852 Peptidase S8/S53 domain superfamily CDA09_16025 IPR023828 Peptidase S8, subtilisin, Ser-active site CDA09_16025 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 CDA09_16025 IPR000209 Peptidase S8/S53 domain CDA09_16025 IPR022398 Peptidase S8, subtilisin, His-active site CDA09_16025 IPR034202 Subtilisin Carlsberg-like catalytic domain CDA09_16025 IPR023827 Peptidase S8, subtilisin, Asp-active site CDA09_16025 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily CDA09_16030 IPR011527 ABC transporter type 1, transmembrane domain CDA09_16030 IPR036640 ABC transporter type 1, transmembrane domain superfamily CDA09_16030 IPR017871 ABC transporter, conserved site CDA09_16030 IPR003593 AAA+ ATPase domain CDA09_16030 IPR003439 ABC transporter-like CDA09_16030 IPR039421 Type I protein exporter CDA09_16030 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16040 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain CDA09_16040 IPR036487 Quinohemoprotein amine dehydrogenase, gamma subunit structural domain superfamily CDA09_16055 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CDA09_16055 IPR015590 Aldehyde dehydrogenase domain CDA09_16055 IPR016162 Aldehyde dehydrogenase, N-terminal CDA09_16055 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDA09_16055 IPR016161 Aldehyde/histidinol dehydrogenase CDA09_16055 IPR016163 Aldehyde dehydrogenase, C-terminal CDA09_16065 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CDA09_16070 IPR004869 Membrane transport protein MMPL domain CDA09_16070 IPR000731 Sterol-sensing domain CDA09_16080 IPR010752 Protein of unknown function DUF1329 CDA09_16090 IPR013655 PAS fold-3 CDA09_16090 IPR035965 PAS domain superfamily CDA09_16090 IPR000700 PAS-associated, C-terminal CDA09_16090 IPR000014 PAS domain CDA09_16090 IPR001610 PAC motif CDA09_16090 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDA09_16090 IPR004090 Chemotaxis methyl-accepting receptor CDA09_16095 IPR005624 Haem-degrading CDA09_16095 IPR038084 GlcG-like domain superfamily CDA09_16110 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDA09_16110 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_16110 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_16110 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase CDA09_16110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_16135 IPR029014 [NiFe]-hydrogenase, large subunit CDA09_16135 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site CDA09_16135 IPR001501 Nickel-dependent hydrogenase, large subunit CDA09_16140 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily CDA09_16140 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CDA09_16145 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CDA09_16145 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CDA09_16145 IPR016214 NAD-reducing hydrogenase, HoxS gamma subunit CDA09_16145 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_16145 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_16150 IPR036249 Thioredoxin-like superfamily CDA09_16150 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CDA09_16150 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CDA09_16150 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal CDA09_16150 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CDA09_16150 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CDA09_16150 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CDA09_16155 IPR005144 ATP-cone domain CDA09_16155 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent CDA09_16155 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CDA09_16155 IPR013509 Ribonucleotide reductase large subunit, N-terminal CDA09_16155 IPR000788 Ribonucleotide reductase large subunit, C-terminal CDA09_16160 IPR004385 Nucleoside diphosphate pyrophosphatase CDA09_16160 IPR015797 NUDIX hydrolase-like domain superfamily CDA09_16160 IPR020084 NUDIX hydrolase, conserved site CDA09_16160 IPR000086 NUDIX hydrolase domain CDA09_16165 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CDA09_16165 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CDA09_16170 IPR003918 NADH:ubiquinone oxidoreductase CDA09_16170 IPR010227 NADH-quinone oxidoreductase, chain M/4 CDA09_16170 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal CDA09_16170 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CDA09_16175 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CDA09_16175 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CDA09_16175 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CDA09_16175 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CDA09_16180 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CDA09_16180 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CDA09_16185 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ CDA09_16185 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CDA09_16190 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_16190 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_16190 IPR010226 NADH-quinone oxidoreductase, chain I CDA09_16195 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CDA09_16195 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CDA09_16200 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CDA09_16200 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal CDA09_16200 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CDA09_16200 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_16200 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDA09_16200 IPR006656 Molybdopterin oxidoreductase CDA09_16200 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_16200 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CDA09_16205 IPR019554 Soluble ligand binding domain CDA09_16205 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CDA09_16205 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CDA09_16205 IPR011537 NADH ubiquinone oxidoreductase, F subunit CDA09_16205 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CDA09_16205 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CDA09_16205 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CDA09_16210 IPR036249 Thioredoxin-like superfamily CDA09_16210 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal CDA09_16210 IPR042128 NuoE domain CDA09_16210 IPR002023 NADH-quinone oxidoreductase subunit E-like CDA09_16215 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CDA09_16215 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CDA09_16215 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CDA09_16215 IPR001135 NADH-quinone oxidoreductase, subunit D CDA09_16215 IPR029014 [NiFe]-hydrogenase, large subunit CDA09_16220 IPR010218 NADH dehydrogenase, subunit C CDA09_16220 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CDA09_16220 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CDA09_16220 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site CDA09_16225 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CDA09_16225 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CDA09_16230 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily CDA09_16230 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CDA09_16230 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CDA09_16240 IPR004692 Preprotein translocase SecG subunit CDA09_16245 IPR013785 Aldolase-type TIM barrel CDA09_16245 IPR035990 Triosephosphate isomerase superfamily CDA09_16245 IPR020861 Triosephosphate isomerase, active site CDA09_16245 IPR000652 Triosephosphate isomerase CDA09_16245 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CDA09_16250 IPR015850 ABC transporter, phosphate import, PstB CDA09_16250 IPR005670 Phosphate transport system permease protein 1 CDA09_16250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16250 IPR003439 ABC transporter-like CDA09_16250 IPR017871 ABC transporter, conserved site CDA09_16250 IPR003593 AAA+ ATPase domain CDA09_16260 IPR024370 PBP domain CDA09_16260 IPR011862 Phosphate binding protein CDA09_16265 IPR005841 Alpha-D-phosphohexomutase superfamily CDA09_16265 IPR016066 Alpha-D-phosphohexomutase, conserved site CDA09_16265 IPR006352 Phosphoglucosamine mutase, bacterial type CDA09_16265 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CDA09_16265 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CDA09_16265 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CDA09_16265 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CDA09_16265 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CDA09_16265 IPR005843 Alpha-D-phosphohexomutase, C-terminal CDA09_16270 IPR006390 Dihydropteroate synthase CDA09_16270 IPR011005 Dihydropteroate synthase-like CDA09_16270 IPR000489 Pterin-binding domain CDA09_16275 IPR041569 AAA ATPase, AAA+ lid domain CDA09_16275 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16275 IPR003959 ATPase, AAA-type, core CDA09_16275 IPR003960 ATPase, AAA-type, conserved site CDA09_16275 IPR011546 Peptidase M41, FtsH extracellular CDA09_16275 IPR000642 Peptidase M41 CDA09_16275 IPR003593 AAA+ ATPase domain CDA09_16275 IPR037219 Peptidase M41-like CDA09_16275 IPR005936 Peptidase, FtsH CDA09_16280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_16280 IPR015507 Ribosomal RNA large subunit methyltransferase E CDA09_16280 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CDA09_16285 IPR017924 RNA-binding protein YhbY CDA09_16285 IPR035920 YhbY-like superfamily CDA09_16285 IPR001890 RNA-binding, CRM domain CDA09_16290 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CDA09_16290 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CDA09_16290 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CDA09_16290 IPR006359 Transcription elongation factor GreA CDA09_16290 IPR028624 Transcription elongation factor GreA/GreB CDA09_16290 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CDA09_16290 IPR023459 Transcription elongation factor GreA/GreB family CDA09_16290 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CDA09_16295 IPR036914 Methylglyoxal synthase-like domain superfamily CDA09_16295 IPR016185 Pre-ATP-grasp domain superfamily CDA09_16295 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain CDA09_16295 IPR011607 Methylglyoxal synthase-like domain CDA09_16295 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CDA09_16295 IPR011761 ATP-grasp fold CDA09_16295 IPR006275 Carbamoyl-phosphate synthase, large subunit CDA09_16295 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CDA09_16295 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily CDA09_16295 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDA09_16300 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CDA09_16300 IPR017926 Glutamine amidotransferase CDA09_16300 IPR029062 Class I glutamine amidotransferase-like CDA09_16300 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CDA09_16300 IPR006274 Carbamoyl-phosphate synthase, small subunit CDA09_16300 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CDA09_16305 IPR036291 NAD(P)-binding domain superfamily CDA09_16305 IPR023940 Dihydrodipicolinate reductase CDA09_16305 IPR022664 Dihydrodipicolinate reductase, conserved site CDA09_16305 IPR000846 Dihydrodipicolinate reductase, N-terminal CDA09_16305 IPR022663 Dihydrodipicolinate reductase, C-terminal CDA09_16310 IPR037873 BamE-like CDA09_16310 IPR026592 Outer membrane protein assembly factor BamE CDA09_16310 IPR007450 Lipoprotein SmpA/OmlA CDA09_16315 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16315 IPR002481 Ferric-uptake regulator CDA09_16315 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16320 IPR003395 RecF/RecN/SMC, N-terminal CDA09_16320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16320 IPR004604 DNA recombination/repair protein RecN CDA09_16325 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CDA09_16325 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CDA09_16325 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CDA09_16325 IPR002504 NAD kinase CDA09_16330 IPR002571 Heat-inducible transcription repressor HrcA CDA09_16330 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily CDA09_16330 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal CDA09_16330 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain CDA09_16330 IPR029016 GAF-like domain superfamily CDA09_16330 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16330 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16335 IPR019772 Ferrochelatase, active site CDA09_16335 IPR033659 Ferrochelatase, N-terminal CDA09_16335 IPR033644 Ferrochelatase, C-terminal CDA09_16335 IPR001015 Ferrochelatase CDA09_16345 IPR005543 PASTA domain CDA09_16345 IPR000719 Protein kinase domain CDA09_16345 IPR008271 Serine/threonine-protein kinase, active site CDA09_16345 IPR017441 Protein kinase, ATP binding site CDA09_16345 IPR011009 Protein kinase-like domain superfamily CDA09_16350 IPR013805 GrpE nucleotide exchange factor, coiled-coil CDA09_16350 IPR000740 GrpE nucleotide exchange factor CDA09_16350 IPR009012 GrpE nucleotide exchange factor, head CDA09_16355 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CDA09_16355 IPR013126 Heat shock protein 70 family CDA09_16355 IPR018181 Heat shock protein 70, conserved site CDA09_16355 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CDA09_16355 IPR012725 Chaperone DnaK CDA09_16360 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CDA09_16360 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CDA09_16360 IPR036869 Chaperone J-domain superfamily CDA09_16360 IPR008971 HSP40/DnaJ peptide-binding CDA09_16360 IPR012724 Chaperone DnaJ CDA09_16360 IPR002939 Chaperone DnaJ, C-terminal CDA09_16360 IPR001623 DnaJ domain CDA09_16360 IPR018253 DnaJ domain, conserved site CDA09_16365 IPR032678 tRNA synthetases class I, catalytic domain CDA09_16365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_16365 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CDA09_16365 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CDA09_16365 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CDA09_16365 IPR015803 Cysteine-tRNA ligase CDA09_16380 IPR029000 Cyclophilin-like domain superfamily CDA09_16380 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CDA09_16380 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CDA09_16380 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CDA09_16385 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CDA09_16385 IPR029000 Cyclophilin-like domain superfamily CDA09_16385 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CDA09_16385 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CDA09_16390 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CDA09_16390 IPR029052 Metallo-dependent phosphatase-like CDA09_16390 IPR010138 UDP-2,3-diacylglucosamine hydrolase CDA09_16395 IPR017932 Glutamine amidotransferase type 2 domain CDA09_16395 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_16395 IPR000836 Phosphoribosyltransferase domain CDA09_16395 IPR029057 Phosphoribosyltransferase-like CDA09_16395 IPR005854 Amidophosphoribosyltransferase CDA09_16395 IPR035584 Amidophosphoribosyltransferase, N-terminal CDA09_16410 IPR036615 Mur ligase, C-terminal domain superfamily CDA09_16410 IPR036565 Mur-like, catalytic domain superfamily CDA09_16410 IPR018109 Folylpolyglutamate synthetase, conserved site CDA09_16410 IPR004101 Mur ligase, C-terminal CDA09_16410 IPR013221 Mur ligase, central CDA09_16410 IPR001645 Folylpolyglutamate synthetase CDA09_16415 IPR041010 Acetyl-coA carboxylase zinc finger domain CDA09_16415 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CDA09_16415 IPR029045 ClpP/crotonase-like domain superfamily CDA09_16415 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CDA09_16415 IPR034733 Acetyl-CoA carboxylase CDA09_16420 IPR018204 Tryptophan synthase, alpha chain, active site CDA09_16420 IPR002028 Tryptophan synthase, alpha chain CDA09_16420 IPR011060 Ribulose-phosphate binding barrel CDA09_16420 IPR013785 Aldolase-type TIM barrel CDA09_16425 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_16425 IPR023026 Tryptophan synthase beta chain/beta chain-like CDA09_16425 IPR006654 Tryptophan synthase, beta chain CDA09_16425 IPR006653 Tryptophan synthase, beta chain, conserved site CDA09_16425 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_16430 IPR011060 Ribulose-phosphate binding barrel CDA09_16430 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CDA09_16430 IPR013785 Aldolase-type TIM barrel CDA09_16435 IPR020095 Pseudouridine synthase I, TruA, C-terminal CDA09_16435 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CDA09_16435 IPR001406 Pseudouridine synthase I, TruA CDA09_16435 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDA09_16450 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CDA09_16450 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CDA09_16450 IPR000534 Semialdehyde dehydrogenase, NAD-binding CDA09_16450 IPR036291 NAD(P)-binding domain superfamily CDA09_16450 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type CDA09_16450 IPR012080 Aspartate-semialdehyde dehydrogenase CDA09_16455 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CDA09_16455 IPR004429 Isopropylmalate dehydrogenase CDA09_16455 IPR024084 Isopropylmalate dehydrogenase-like domain CDA09_16460 IPR004431 3-isopropylmalate dehydratase, small subunit CDA09_16460 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDA09_16460 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CDA09_16460 IPR033940 3-isopropylmalate dehydratase, swivel domain CDA09_16465 IPR033941 3-Isopropylmalate dehydratase, catalytic domain CDA09_16465 IPR004430 3-isopropylmalate dehydratase, large subunit CDA09_16465 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CDA09_16465 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CDA09_16465 IPR036008 Aconitase, iron-sulfur domain CDA09_16465 IPR018136 Aconitase family, 4Fe-4S cluster binding site CDA09_16470 IPR001915 Peptidase M48 CDA09_16470 IPR011990 Tetratricopeptide-like helical domain superfamily CDA09_16470 IPR030873 Beta-barrel assembly-enhancing protease CDA09_16475 IPR026032 Probable 3-phenylpropionic acid transporter CDA09_16475 IPR024989 Major facilitator superfamily associated domain CDA09_16475 IPR036259 MFS transporter superfamily CDA09_16480 IPR035904 Chorismate synthase AroC superfamily CDA09_16480 IPR000453 Chorismate synthase CDA09_16480 IPR020541 Chorismate synthase, conserved site CDA09_16485 IPR039557 AHAS, ACT domain CDA09_16485 IPR004789 Acetolactate synthase, small subunit CDA09_16485 IPR002912 ACT domain CDA09_16490 IPR012846 Acetolactate synthase, large subunit, biosynthetic CDA09_16490 IPR029061 Thiamin diphosphate-binding fold CDA09_16490 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CDA09_16490 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_16490 IPR039368 Acetolactate synthase large subunit, TPP binding domain CDA09_16490 IPR000399 TPP-binding enzyme, conserved site CDA09_16490 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDA09_16490 IPR012000 Thiamine pyrophosphate enzyme, central domain CDA09_16495 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_16495 IPR020845 AMP-binding, conserved site CDA09_16495 IPR000873 AMP-dependent synthetase/ligase CDA09_16495 IPR042099 AMP-dependent synthetase-like superfamily CDA09_16505 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_16505 IPR000813 7Fe ferredoxin CDA09_16505 IPR022569 Ferredoxin, C-terminal CDA09_16505 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_16510 IPR005746 Thioredoxin CDA09_16510 IPR036249 Thioredoxin-like superfamily CDA09_16510 IPR017937 Thioredoxin, conserved site CDA09_16510 IPR013766 Thioredoxin domain CDA09_16515 IPR004665 Transcription termination factor Rho CDA09_16515 IPR011113 Rho termination factor, RNA-binding domain CDA09_16515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16515 IPR003593 AAA+ ATPase domain CDA09_16515 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CDA09_16515 IPR011129 Cold shock domain CDA09_16515 IPR011112 Rho termination factor, N-terminal CDA09_16515 IPR041703 Transcription termination factor Rho, ATP binding domain CDA09_16515 IPR036269 Rho termination factor, N-terminal domain superfamily CDA09_16515 IPR012340 Nucleic acid-binding, OB-fold CDA09_16520 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDA09_16520 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDA09_16520 IPR036291 NAD(P)-binding domain superfamily CDA09_16520 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CDA09_16520 IPR022694 3-hydroxyacyl-CoA dehydrogenase CDA09_16520 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_16520 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CDA09_16555 IPR016164 FAD-linked oxidase-like, C-terminal CDA09_16555 IPR004490 Glycolate oxidase subunit GlcD CDA09_16555 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDA09_16555 IPR004113 FAD-linked oxidase, C-terminal CDA09_16555 IPR016166 FAD-binding domain, PCMH-type CDA09_16555 IPR036318 FAD-binding, type PCMH-like superfamily CDA09_16555 IPR006094 FAD linked oxidase, N-terminal CDA09_16560 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_16560 IPR001423 Lysophospholipase patatin, conserved site CDA09_16560 IPR002641 Patatin-like phospholipase domain CDA09_16565 IPR005840 Ribosomal protein S12 methylthiotransferase RimO CDA09_16565 IPR007197 Radical SAM CDA09_16565 IPR002792 TRAM domain CDA09_16565 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_16565 IPR006638 Elp3/MiaB/NifB CDA09_16565 IPR041582 RimO, TRAM domain CDA09_16565 IPR020612 Methylthiotransferase, conserved site CDA09_16565 IPR013848 Methylthiotransferase, N-terminal CDA09_16565 IPR038135 Methylthiotransferase, N-terminal domain superfamily CDA09_16565 IPR005839 Methylthiotransferase CDA09_16570 IPR012909 PHA accumulation regulator DNA-binding, N-terminal CDA09_16570 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR CDA09_16570 IPR007897 PHB accumulation regulatory CDA09_16575 IPR011283 Acetoacetyl-CoA reductase CDA09_16575 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16575 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_16575 IPR036291 NAD(P)-binding domain superfamily CDA09_16580 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16580 IPR011283 Acetoacetyl-CoA reductase CDA09_16580 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_16580 IPR036291 NAD(P)-binding domain superfamily CDA09_16585 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I CDA09_16585 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain CDA09_16585 IPR029058 Alpha/Beta hydrolase fold CDA09_16600 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDA09_16600 IPR006225 Pseudouridine synthase, RluC/RluD CDA09_16600 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CDA09_16600 IPR006145 Pseudouridine synthase, RsuA/RluA CDA09_16600 IPR002942 RNA-binding S4 domain CDA09_16600 IPR036986 RNA-binding S4 domain superfamily CDA09_16605 IPR017689 Outer membrane protein assembly factor BamD CDA09_16605 IPR011990 Tetratricopeptide-like helical domain superfamily CDA09_16605 IPR039565 Outer membrane lipoprotein BamD-like CDA09_16615 IPR031304 Transglycosylase SLT domain 2 CDA09_16615 IPR011757 Lytic transglycosylase MltB CDA09_16615 IPR023346 Lysozyme-like domain superfamily CDA09_16625 IPR006237 L-methionine gamma-lyase CDA09_16625 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_16625 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_16625 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_16625 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDA09_16630 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16630 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_16630 IPR036291 NAD(P)-binding domain superfamily CDA09_16630 IPR011294 3-hydroxybutyrate dehydrogenase CDA09_16635 IPR028202 Reductase, C-terminal CDA09_16635 IPR023753 FAD/NAD(P)-binding domain CDA09_16635 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_16635 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CDA09_16640 IPR029039 Flavoprotein-like superfamily CDA09_16640 IPR005025 NADPH-dependent FMN reductase-like CDA09_16645 IPR002933 Peptidase M20 CDA09_16645 IPR011650 Peptidase M20, dimerisation domain CDA09_16645 IPR017439 Amidohydrolase CDA09_16645 IPR036264 Bacterial exopeptidase dimerisation domain CDA09_16650 IPR005115 Uncharacterised domain UPF0126 CDA09_16655 IPR036259 MFS transporter superfamily CDA09_16655 IPR020846 Major facilitator superfamily domain CDA09_16655 IPR011701 Major facilitator superfamily CDA09_16670 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA CDA09_16670 IPR003667 NqrDE/RnfAE CDA09_16675 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria CDA09_16675 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB CDA09_16675 IPR011005 Dihydropteroate synthase-like CDA09_16675 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_16675 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_16675 IPR007202 4Fe-4S domain CDA09_16680 IPR026902 RnfC Barrel sandwich hybrid domain CDA09_16680 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CDA09_16680 IPR019554 Soluble ligand binding domain CDA09_16680 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_16680 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_16680 IPR009051 Alpha-helical ferredoxin CDA09_16680 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC CDA09_16680 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CDA09_16685 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D CDA09_16685 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD CDA09_16690 IPR007329 FMN-binding CDA09_16690 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG CDA09_16695 IPR003667 NqrDE/RnfAE CDA09_16695 IPR010968 Ion-translocating oxidoreductase complex subunit E CDA09_16700 IPR037021 RnfH superfamily CDA09_16700 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_16700 IPR005346 RnfH protein CDA09_16715 IPR023703 Membrane-bound lytic murein transglycosylase F CDA09_16715 IPR008258 Transglycosylase SLT domain 1 CDA09_16715 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDA09_16715 IPR023346 Lysozyme-like domain superfamily CDA09_16720 IPR002317 Serine-tRNA ligase, type1 CDA09_16720 IPR015866 Serine-tRNA synthetase, type1, N-terminal CDA09_16720 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CDA09_16720 IPR033729 Serine-tRNA ligase catalytic core domain CDA09_16720 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CDA09_16720 IPR006195 Aminoacyl-tRNA synthetase, class II CDA09_16720 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily CDA09_16730 IPR003959 ATPase, AAA-type, core CDA09_16730 IPR032423 AAA C-terminal domain CDA09_16730 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CDA09_16730 IPR021886 MgsA AAA+ ATPase C-terminal CDA09_16730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16730 IPR003593 AAA+ ATPase domain CDA09_16735 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria CDA09_16735 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CDA09_16735 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDA09_16740 IPR041027 FtsK alpha domain CDA09_16740 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16740 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16740 IPR025199 DNA translocase FtsK, 4TM region CDA09_16740 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_16740 IPR002543 FtsK domain CDA09_16740 IPR018541 FtsK gamma domain CDA09_16745 IPR012318 Crp-type HTH domain CDA09_16745 IPR018490 Cyclic nucleotide-binding-like CDA09_16745 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16745 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16745 IPR018335 Transcription regulator HTH, Crp-type, conserved site CDA09_16745 IPR000595 Cyclic nucleotide-binding domain CDA09_16745 IPR014710 RmlC-like jelly roll fold CDA09_16745 IPR018488 Cyclic nucleotide-binding, conserved site CDA09_16750 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_16750 IPR023753 FAD/NAD(P)-binding domain CDA09_16750 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CDA09_16750 IPR005982 Thioredoxin reductase CDA09_16755 IPR002625 Smr domain CDA09_16755 IPR036063 Smr domain superfamily CDA09_16755 IPR022990 Uncharacterised protein family UPF0115 CDA09_16760 IPR017918 Nitrogen regulatory protein PII, conserved site CDA09_16760 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDA09_16760 IPR002187 Nitrogen regulatory protein PII CDA09_16760 IPR002332 Nitrogen regulatory protein P-II, urydylation site CDA09_16760 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDA09_16765 IPR014445 Glutamine-dependent NAD(+) synthetase CDA09_16765 IPR022310 NAD/GMP synthase CDA09_16765 IPR003010 Carbon-nitrogen hydrolase CDA09_16765 IPR003694 NAD(+) synthetase CDA09_16765 IPR000132 Nitrilase/cyanide hydratase, conserved site CDA09_16765 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_16765 IPR036526 Carbon-nitrogen hydrolase superfamily CDA09_16775 IPR008162 Inorganic pyrophosphatase CDA09_16775 IPR036649 Inorganic pyrophosphatase superfamily CDA09_16785 IPR018303 P-type ATPase, phosphorylation site CDA09_16785 IPR023299 P-type ATPase, cytoplasmic domain N CDA09_16785 IPR006122 Heavy metal-associated domain, copper ion-binding CDA09_16785 IPR017969 Heavy-metal-associated, conserved site CDA09_16785 IPR036412 HAD-like superfamily CDA09_16785 IPR036163 Heavy metal-associated domain superfamily CDA09_16785 IPR023214 HAD superfamily CDA09_16785 IPR006121 Heavy metal-associated domain, HMA CDA09_16785 IPR001757 P-type ATPase CDA09_16785 IPR027256 P-type ATPase, subfamily IB CDA09_16785 IPR008250 P-type ATPase, A domain superfamily CDA09_16785 IPR023298 P-type ATPase, transmembrane domain superfamily CDA09_16790 IPR009061 Putative DNA-binding domain superfamily CDA09_16790 IPR015358 Transcription regulator MerR, DNA binding CDA09_16790 IPR000551 MerR-type HTH domain CDA09_16790 IPR011794 Hg(II)-responsive transcriptional regulator CDA09_16800 IPR007197 Radical SAM CDA09_16800 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN CDA09_16800 IPR010723 HemN, C-terminal CDA09_16800 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_16800 IPR006638 Elp3/MiaB/NifB CDA09_16800 IPR034505 Anaerobic coproporphyrinogen-III oxidase CDA09_16805 IPR018490 Cyclic nucleotide-binding-like CDA09_16805 IPR000595 Cyclic nucleotide-binding domain CDA09_16805 IPR012318 Crp-type HTH domain CDA09_16805 IPR014710 RmlC-like jelly roll fold CDA09_16805 IPR018335 Transcription regulator HTH, Crp-type, conserved site CDA09_16805 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_16805 IPR036390 Winged helix DNA-binding domain superfamily CDA09_16815 IPR007360 Invasion gene expression up-regulator, SirB CDA09_16825 IPR018488 Cyclic nucleotide-binding, conserved site CDA09_16825 IPR028325 Voltage-gated potassium channel CDA09_16825 IPR000595 Cyclic nucleotide-binding domain CDA09_16825 IPR005821 Ion transport domain CDA09_16825 IPR018490 Cyclic nucleotide-binding-like CDA09_16825 IPR014710 RmlC-like jelly roll fold CDA09_16830 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I CDA09_16830 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain CDA09_16830 IPR029058 Alpha/Beta hydrolase fold CDA09_16830 IPR000073 Alpha/beta hydrolase fold-1 CDA09_16835 IPR022712 Beta-Casp domain CDA09_16835 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_16835 IPR001279 Metallo-beta-lactamase CDA09_16835 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CDA09_16855 IPR013783 Immunoglobulin-like fold CDA09_16855 IPR032879 FixG, C-terminal immunoglobulin-like domain CDA09_16855 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG CDA09_16855 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_16855 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_16860 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal CDA09_16860 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily CDA09_16860 IPR036909 Cytochrome c-like domain superfamily CDA09_16860 IPR008168 Cytochrome c, class IC CDA09_16860 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CDA09_16860 IPR009056 Cytochrome c-like domain CDA09_16875 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CDA09_16875 IPR023616 Cytochrome c oxidase-like, subunit I domain CDA09_16875 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CDA09_16875 IPR000883 Cytochrome c oxidase subunit I CDA09_16875 IPR004677 Cytochrome c oxidase cbb3-type, subunit I CDA09_16885 IPR017969 Heavy-metal-associated, conserved site CDA09_16885 IPR018303 P-type ATPase, phosphorylation site CDA09_16885 IPR006121 Heavy metal-associated domain, HMA CDA09_16885 IPR008250 P-type ATPase, A domain superfamily CDA09_16885 IPR036412 HAD-like superfamily CDA09_16885 IPR001757 P-type ATPase CDA09_16885 IPR027256 P-type ATPase, subfamily IB CDA09_16885 IPR036163 Heavy metal-associated domain superfamily CDA09_16885 IPR023214 HAD superfamily CDA09_16885 IPR023299 P-type ATPase, cytoplasmic domain N CDA09_16885 IPR023298 P-type ATPase, transmembrane domain superfamily CDA09_16890 IPR036291 NAD(P)-binding domain superfamily CDA09_16890 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_16890 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16895 IPR023735 Uncharacterised nudix hydrolase NudL CDA09_16895 IPR000059 NUDIX hydrolase, NudL, conserved site CDA09_16895 IPR015797 NUDIX hydrolase-like domain superfamily CDA09_16895 IPR000086 NUDIX hydrolase domain CDA09_16905 IPR001789 Signal transduction response regulator, receiver domain CDA09_16905 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_16905 IPR010559 Signal transduction histidine kinase, internal region CDA09_16905 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_16905 IPR011006 CheY-like superfamily CDA09_16910 IPR012902 Prokaryotic N-terminal methylation site CDA09_16910 IPR001082 Fimbrial protein pilin CDA09_16940 IPR012902 Prokaryotic N-terminal methylation site CDA09_16940 IPR028188 Type IV pilin PilA CDA09_16945 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CDA09_16945 IPR005952 Phosphoglycerate mutase 1 CDA09_16945 IPR013078 Histidine phosphatase superfamily, clade-1 CDA09_16945 IPR029033 Histidine phosphatase superfamily CDA09_16960 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_16960 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_16960 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_16960 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_16960 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_16960 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_16960 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_16965 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDA09_16965 IPR022694 3-hydroxyacyl-CoA dehydrogenase CDA09_16965 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDA09_16965 IPR036291 NAD(P)-binding domain superfamily CDA09_16965 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CDA09_16965 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_16970 IPR020616 Thiolase, N-terminal CDA09_16970 IPR020617 Thiolase, C-terminal CDA09_16970 IPR020610 Thiolase, active site CDA09_16970 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_16970 IPR016039 Thiolase-like CDA09_16970 IPR002155 Thiolase CDA09_16975 IPR036291 NAD(P)-binding domain superfamily CDA09_16975 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_16975 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16985 IPR012793 Beta-ketoadipyl CoA thiolase CDA09_16985 IPR002155 Thiolase CDA09_16985 IPR020616 Thiolase, N-terminal CDA09_16985 IPR020613 Thiolase, conserved site CDA09_16985 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_16985 IPR020610 Thiolase, active site CDA09_16985 IPR020617 Thiolase, C-terminal CDA09_16985 IPR016039 Thiolase-like CDA09_16995 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_16995 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_16995 IPR036291 NAD(P)-binding domain superfamily CDA09_17000 IPR011701 Major facilitator superfamily CDA09_17000 IPR004734 Multidrug resistance protein CDA09_17000 IPR036259 MFS transporter superfamily CDA09_17000 IPR020846 Major facilitator superfamily domain CDA09_17000 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CDA09_17010 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17010 IPR036291 NAD(P)-binding domain superfamily CDA09_17010 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_17015 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_17015 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_17015 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_17015 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_17015 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_17015 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_17020 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_17020 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_17020 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_17020 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_17020 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_17020 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_17035 IPR011032 GroES-like superfamily CDA09_17035 IPR036291 NAD(P)-binding domain superfamily CDA09_17035 IPR020843 Polyketide synthase, enoylreductase domain CDA09_17035 IPR013149 Alcohol dehydrogenase, C-terminal CDA09_17035 IPR041694 Oxidoreductase, N-terminal domain CDA09_17040 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDA09_17040 IPR036291 NAD(P)-binding domain superfamily CDA09_17040 IPR029045 ClpP/crotonase-like domain superfamily CDA09_17040 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_17040 IPR012802 Fatty oxidation complex, alpha subunit FadJ CDA09_17040 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDA09_17040 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CDA09_17040 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_17045 IPR016039 Thiolase-like CDA09_17045 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_17045 IPR020610 Thiolase, active site CDA09_17045 IPR002155 Thiolase CDA09_17045 IPR020616 Thiolase, N-terminal CDA09_17045 IPR020617 Thiolase, C-terminal CDA09_17045 IPR020613 Thiolase, conserved site CDA09_17050 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_17050 IPR029045 ClpP/crotonase-like domain superfamily CDA09_17050 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_17050 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_17060 IPR036291 NAD(P)-binding domain superfamily CDA09_17060 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17060 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_17065 IPR020845 AMP-binding, conserved site CDA09_17065 IPR000873 AMP-dependent synthetase/ligase CDA09_17065 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_17065 IPR042099 AMP-dependent synthetase-like superfamily CDA09_17085 IPR036259 MFS transporter superfamily CDA09_17085 IPR020846 Major facilitator superfamily domain CDA09_17085 IPR011701 Major facilitator superfamily CDA09_17090 IPR013087 Zinc finger C2H2-type CDA09_17090 IPR012286 Tetrahaem cytochrome domain CDA09_17090 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CDA09_17090 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_17090 IPR036280 Multiheme cytochrome superfamily CDA09_17090 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CDA09_17090 IPR011031 Multihaem cytochrome CDA09_17090 IPR010960 Flavocytochrome c CDA09_17095 IPR006016 UspA CDA09_17095 IPR006015 Universal stress protein A family CDA09_17110 IPR010752 Protein of unknown function DUF1329 CDA09_17125 IPR036291 NAD(P)-binding domain superfamily CDA09_17125 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_17125 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17130 IPR036291 NAD(P)-binding domain superfamily CDA09_17130 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17130 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_17135 IPR013785 Aldolase-type TIM barrel CDA09_17135 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_17135 IPR023753 FAD/NAD(P)-binding domain CDA09_17135 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDA09_17140 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_17140 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_17140 IPR036291 NAD(P)-binding domain superfamily CDA09_17145 IPR036259 MFS transporter superfamily CDA09_17145 IPR020846 Major facilitator superfamily domain CDA09_17145 IPR011701 Major facilitator superfamily CDA09_17150 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_17150 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_17150 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_17150 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_17150 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_17150 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_17150 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_17155 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_17155 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_17155 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_17155 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_17155 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_17155 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_17155 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_17160 IPR002559 Transposase, IS4-like CDA09_17160 IPR008490 Transposase InsH, N-terminal CDA09_17190 IPR001341 Aspartate kinase CDA09_17190 IPR005260 Aspartate kinase, monofunctional class CDA09_17190 IPR041740 Aspartokinase catalytic domain CDA09_17190 IPR002912 ACT domain CDA09_17190 IPR018042 Aspartate kinase, conserved site CDA09_17190 IPR001048 Aspartate/glutamate/uridylate kinase CDA09_17190 IPR027795 CASTOR, ACT domain CDA09_17190 IPR036393 Acetylglutamate kinase-like superfamily CDA09_17205 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily CDA09_17205 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family CDA09_17210 IPR024393 Mechanosensitive ion channel MscS, porin domain CDA09_17210 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CDA09_17210 IPR023408 Mechanosensitive ion channel MscS domain superfamily CDA09_17210 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CDA09_17210 IPR006686 Mechanosensitive ion channel MscS, conserved site CDA09_17210 IPR011066 Mechanosensitive ion channel MscS, C-terminal CDA09_17210 IPR010920 LSM domain superfamily CDA09_17210 IPR006685 Mechanosensitive ion channel MscS CDA09_17215 IPR001736 Phospholipase D/Transphosphatidylase CDA09_17215 IPR025202 Phospholipase D-like domain CDA09_17220 IPR004573 rRNA small subunit methyltransferase B CDA09_17220 IPR023267 RNA (C5-cytosine) methyltransferase CDA09_17220 IPR006027 NusB/RsmB/TIM44 CDA09_17220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_17220 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CDA09_17220 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CDA09_17220 IPR035926 NusB-like superfamily CDA09_17230 IPR036477 Formyl transferase, N-terminal domain superfamily CDA09_17230 IPR004607 Phosphoribosylglycinamide formyltransferase CDA09_17230 IPR002376 Formyl transferase, N-terminal CDA09_17230 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CDA09_17235 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_17235 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_17235 IPR042120 MutL, C-terminal domain, dimerisation subdomain CDA09_17235 IPR014762 DNA mismatch repair, conserved site CDA09_17235 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms CDA09_17235 IPR013507 DNA mismatch repair protein, S5 domain 2-like CDA09_17235 IPR020667 DNA mismatch repair protein, MutL CDA09_17235 IPR037198 MutL, C-terminal domain superfamily CDA09_17235 IPR042121 MutL, C-terminal domain, regulatory subdomain CDA09_17235 IPR002099 DNA mismatch repair protein family, N-terminal CDA09_17235 IPR014790 MutL, C-terminal, dimerisation CDA09_17235 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_17265 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative CDA09_17265 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_17265 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_17265 IPR002288 DNA gyrase B subunit, C-terminal CDA09_17265 IPR018522 DNA topoisomerase, type IIA, conserved site CDA09_17265 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CDA09_17265 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CDA09_17265 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_17265 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CDA09_17265 IPR006171 TOPRIM domain CDA09_17265 IPR001241 DNA topoisomerase, type IIA CDA09_17265 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_17275 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDA09_17275 IPR005501 LamB/YcsF/PxpA-like CDA09_17280 IPR003778 Carboxyltransferase domain, subdomain A and B CDA09_17280 IPR029000 Cyclophilin-like domain superfamily CDA09_17285 IPR003833 Carboxyltransferase domain, subdomain C and D CDA09_17285 IPR029000 Cyclophilin-like domain superfamily CDA09_17285 IPR010016 KipI family CDA09_17295 IPR038021 Putative hydro-lyase CDA09_17295 IPR016938 Uncharacterised protein family UPF0317 CDA09_17295 IPR009906 D-glutamate cyclase CDA09_17305 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CDA09_17305 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CDA09_17305 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CDA09_17305 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CDA09_17305 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDA09_17305 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative CDA09_17310 IPR036737 OmpA-like domain superfamily CDA09_17310 IPR006665 OmpA-like domain CDA09_17310 IPR025713 Motility protein B, N-terminal domain CDA09_17315 IPR002898 MotA/TolQ/ExbB proton channel CDA09_17315 IPR000540 Flagellar motor protein MotA, conserved site CDA09_17320 IPR014284 RNA polymerase sigma-70 like domain CDA09_17320 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_17320 IPR000943 RNA polymerase sigma-70 CDA09_17320 IPR007627 RNA polymerase sigma-70 region 2 CDA09_17320 IPR007624 RNA polymerase sigma-70 region 3 CDA09_17320 IPR012845 RNA polymerase sigma factor, FliA/WhiG CDA09_17320 IPR013325 RNA polymerase sigma factor, region 2 CDA09_17320 IPR028617 RNA polymerase sigma factor FliA CDA09_17320 IPR007630 RNA polymerase sigma-70 region 4 CDA09_17330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17330 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CDA09_17330 IPR020006 Flagellar biosynthesis protein FlhF CDA09_17330 IPR003593 AAA+ ATPase domain CDA09_17335 IPR001712 Type III secretion system FHIPEP CDA09_17335 IPR006301 Flagellar biosynthesis protein FlhA CDA09_17335 IPR042194 FHIPEP, domain 1 CDA09_17335 IPR025505 FHIPEP conserved site CDA09_17335 IPR042196 FHIPEP, domain 4 CDA09_17335 IPR042193 FHIPEP, domain 3 CDA09_17340 IPR006135 Type III secretion system substrate exporter CDA09_17340 IPR006136 Flagellar biosynthetic protein FlhB CDA09_17340 IPR029025 Type III secretion system substrate exporter, C-terminal CDA09_17360 IPR010280 (Uracil-5)-methyltransferase family CDA09_17360 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD CDA09_17360 IPR030390 RNA methyltransferase TrmA, active site CDA09_17360 IPR012340 Nucleic acid-binding, OB-fold CDA09_17360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_17360 IPR002792 TRAM domain CDA09_17375 IPR042268 Outer membrane protein assembly factor BamC, C-terminal CDA09_17375 IPR014524 Outer membrane protein assembly factor BamC CDA09_17375 IPR010653 NlpB/DapX lipoprotein CDA09_17380 IPR020625 Schiff base-forming aldolase, active site CDA09_17380 IPR013785 Aldolase-type TIM barrel CDA09_17380 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CDA09_17380 IPR020624 Schiff base-forming aldolase, conserved site CDA09_17380 IPR002220 DapA-like CDA09_17385 IPR000286 Histone deacetylase family CDA09_17385 IPR023696 Ureohydrolase domain superfamily CDA09_17385 IPR037138 Histone deacetylase domain superfamily CDA09_17385 IPR023801 Histone deacetylase domain CDA09_17390 IPR011703 ATPase, AAA-3 CDA09_17390 IPR041628 ChlI/MoxR, AAA lid domain CDA09_17390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17400 IPR038765 Papain-like cysteine peptidase superfamily CDA09_17400 IPR002931 Transglutaminase-like CDA09_17400 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal CDA09_17400 IPR025403 Domain of unknown function DUF4129 CDA09_17405 IPR011757 Lytic transglycosylase MltB CDA09_17405 IPR023346 Lysozyme-like domain superfamily CDA09_17405 IPR031304 Transglycosylase SLT domain 2 CDA09_17410 IPR013325 RNA polymerase sigma factor, region 2 CDA09_17410 IPR012761 RNA polymerase sigma factor RpoS CDA09_17410 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_17410 IPR007630 RNA polymerase sigma-70 region 4 CDA09_17410 IPR007627 RNA polymerase sigma-70 region 2 CDA09_17410 IPR009042 RNA polymerase sigma-70 region 1.2 CDA09_17410 IPR007624 RNA polymerase sigma-70 region 3 CDA09_17410 IPR014284 RNA polymerase sigma-70 like domain CDA09_17410 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_17410 IPR000943 RNA polymerase sigma-70 CDA09_17415 IPR018392 LysM domain CDA09_17415 IPR016047 Peptidase M23 CDA09_17415 IPR036779 LysM domain superfamily CDA09_17415 IPR011055 Duplicated hybrid motif CDA09_17420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_17420 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CDA09_17425 IPR036523 SurE-like phosphatase/nucleotidase superfamily CDA09_17425 IPR030048 Survival protein SurE CDA09_17425 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CDA09_17440 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CDA09_17440 IPR020816 Histone-like DNA-binding protein, conserved site CDA09_17440 IPR000119 Histone-like DNA-binding protein CDA09_17440 IPR005684 Integration host factor, alpha subunit CDA09_17445 IPR005147 tRNA synthetase, B5-domain CDA09_17445 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CDA09_17445 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain CDA09_17445 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CDA09_17445 IPR012340 Nucleic acid-binding, OB-fold CDA09_17445 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily CDA09_17445 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CDA09_17445 IPR002547 tRNA-binding domain CDA09_17445 IPR009061 Putative DNA-binding domain superfamily CDA09_17445 IPR005146 B3/B4 tRNA-binding domain CDA09_17445 IPR005121 Ferrodoxin-fold anticodon-binding domain CDA09_17450 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CDA09_17450 IPR002319 Phenylalanyl-tRNA synthetase CDA09_17450 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CDA09_17450 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CDA09_17450 IPR006195 Aminoacyl-tRNA synthetase, class II CDA09_17450 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CDA09_17455 IPR035566 Ribosomal protein L20, C-terminal CDA09_17455 IPR005813 Ribosomal protein L20 CDA09_17460 IPR018265 Ribosomal protein L35, conserved site CDA09_17460 IPR001706 Ribosomal protein L35, non-mitochondrial CDA09_17460 IPR037229 Ribosomal protein L35 superfamily CDA09_17460 IPR021137 Ribosomal protein L35 CDA09_17465 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily CDA09_17465 IPR019813 Translation initiation factor 3, conserved site CDA09_17465 IPR019815 Translation initiation factor 3, C-terminal CDA09_17465 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily CDA09_17465 IPR001288 Translation initiation factor 3 CDA09_17465 IPR019814 Translation initiation factor 3, N-terminal CDA09_17470 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CDA09_17470 IPR006195 Aminoacyl-tRNA synthetase, class II CDA09_17470 IPR012675 Beta-grasp domain superfamily CDA09_17470 IPR036621 Anticodon-binding domain superfamily CDA09_17470 IPR033728 Threonine-tRNA ligase catalytic core domain CDA09_17470 IPR004095 TGS CDA09_17470 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CDA09_17470 IPR012676 TGS-like CDA09_17470 IPR002320 Threonine-tRNA ligase, class IIa CDA09_17470 IPR004154 Anticodon-binding CDA09_17470 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CDA09_17485 IPR006638 Elp3/MiaB/NifB CDA09_17485 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria CDA09_17485 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CDA09_17485 IPR013785 Aldolase-type TIM barrel CDA09_17485 IPR023885 4Fe4S-binding SPASM domain CDA09_17485 IPR007197 Radical SAM CDA09_17485 IPR017200 Coenzyme PQQ synthesis protein E CDA09_17490 IPR040523 AsnC-like ligand binding domain CDA09_17495 IPR000485 AsnC-type HTH domain CDA09_17495 IPR040523 AsnC-like ligand binding domain CDA09_17495 IPR019888 Transcription regulator AsnC-type CDA09_17495 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDA09_17495 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_17500 IPR040523 AsnC-like ligand binding domain CDA09_17505 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CDA09_17505 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily CDA09_17510 IPR036909 Cytochrome c-like domain superfamily CDA09_17510 IPR009056 Cytochrome c-like domain CDA09_17515 IPR035996 Tetrapyrrole methylase superfamily CDA09_17515 IPR000878 Tetrapyrrole methylase CDA09_17515 IPR006367 Sirohaem synthase, N-terminal CDA09_17515 IPR019478 Sirohaem synthase, dimerisation domain CDA09_17515 IPR028281 Siroheme synthase, central domain CDA09_17515 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CDA09_17515 IPR012409 Sirohaem synthase CDA09_17515 IPR037115 Sirohaem synthase, dimerisation domain superfamily CDA09_17515 IPR036291 NAD(P)-binding domain superfamily CDA09_17515 IPR006366 Uroporphyrin-III C-methyltransferase CDA09_17515 IPR014776 Tetrapyrrole methylase, subdomain 2 CDA09_17515 IPR014777 Tetrapyrrole methylase, subdomain 1 CDA09_17520 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CDA09_17520 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily CDA09_17520 IPR036909 Cytochrome c-like domain superfamily CDA09_17520 IPR009056 Cytochrome c-like domain CDA09_17530 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_17530 IPR005858 Cysteine synthase CysM CDA09_17530 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CDA09_17530 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_17530 IPR005856 Cysteine synthase CDA09_17535 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_17535 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CDA09_17535 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CDA09_17535 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CDA09_17535 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CDA09_17535 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CDA09_17535 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CDA09_17535 IPR036291 NAD(P)-binding domain superfamily CDA09_17540 IPR011990 Tetratricopeptide-like helical domain superfamily CDA09_17540 IPR030865 Lipopolysaccharide assembly protein B CDA09_17540 IPR013026 Tetratricopeptide repeat-containing domain CDA09_17540 IPR041166 LapB, rubredoxin metal binding domain CDA09_17540 IPR019734 Tetratricopeptide repeat CDA09_17550 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CDA09_17550 IPR000119 Histone-like DNA-binding protein CDA09_17550 IPR005685 Integration host factor, beta subunit CDA09_17555 IPR012340 Nucleic acid-binding, OB-fold CDA09_17555 IPR000110 Ribosomal protein S1 CDA09_17555 IPR003029 S1 domain CDA09_17555 IPR022967 RNA-binding domain, S1 CDA09_17560 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CDA09_17560 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CDA09_17560 IPR001986 Enolpyruvate transferase domain CDA09_17560 IPR036968 Enolpyruvate transferase domain superfamily CDA09_17560 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CDA09_17565 IPR036291 NAD(P)-binding domain superfamily CDA09_17565 IPR002912 ACT domain CDA09_17565 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_17565 IPR003099 Prephenate dehydrogenase CDA09_17570 IPR002701 Chorismate mutase II, prokaryotic-type CDA09_17570 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain CDA09_17570 IPR001086 Prephenate dehydratase CDA09_17570 IPR018528 Prephenate dehydratase, conserved site CDA09_17570 IPR036263 Chorismate mutase type II superfamily CDA09_17570 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CDA09_17570 IPR002912 ACT domain CDA09_17570 IPR036979 Chorismate mutase domain superfamily CDA09_17575 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_17575 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_17575 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_17575 IPR022278 Phosphoserine aminotransferase CDA09_17575 IPR000192 Aminotransferase class V domain CDA09_17580 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CDA09_17580 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CDA09_17580 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CDA09_17580 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDA09_17580 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CDA09_17580 IPR005743 DNA gyrase, subunit A CDA09_17580 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CDA09_17585 IPR006680 Amidohydrolase-related CDA09_17585 IPR011059 Metal-dependent hydrolase, composite domain superfamily CDA09_17585 IPR032466 Metal-dependent hydrolase CDA09_17585 IPR023512 Deaminase MtaD/DadD CDA09_17590 IPR036737 OmpA-like domain superfamily CDA09_17590 IPR006690 Outer membrane protein, OmpA-like, conserved site CDA09_17590 IPR006664 Outer membrane protein, bacterial CDA09_17590 IPR006665 OmpA-like domain CDA09_17595 IPR010233 Ubiquinone biosynthesis O-methyltransferase CDA09_17595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_17645 IPR018146 Glyoxalase I, conserved site CDA09_17645 IPR004361 Glyoxalase I CDA09_17645 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_17645 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_17645 IPR037523 Vicinal oxygen chelate (VOC) domain CDA09_17665 IPR003593 AAA+ ATPase domain CDA09_17665 IPR022941 Signal recognition particle, SRP54 subunit CDA09_17665 IPR004780 Signal recognition particle protein CDA09_17665 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CDA09_17665 IPR013822 Signal recognition particle SRP54, helical bundle CDA09_17665 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17665 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CDA09_17665 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CDA09_17665 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily CDA09_17675 IPR037257 General secretory system II, protein E, N-terminal superfamily CDA09_17675 IPR013374 ATPase, type IV, pilus assembly, PilB CDA09_17675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17675 IPR042181 Type II secretion system, protein E, N-terminal CDA09_17675 IPR007831 General secretory system II, protein E, N-terminal CDA09_17675 IPR001482 Type II/IV secretion system protein CDA09_17680 IPR003004 GspF/PilC family CDA09_17680 IPR001992 Type II secretion system conserved site CDA09_17680 IPR042094 Type II secretion system F domain superfamily CDA09_17680 IPR018076 Type II secretion system F domain CDA09_17685 IPR000045 Prepilin type IV endopeptidase, peptidase domain CDA09_17685 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDA09_17685 IPR010627 Peptidase A24A, N-terminal CDA09_17700 IPR012340 Nucleic acid-binding, OB-fold CDA09_17700 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CDA09_17700 IPR029351 GAD domain CDA09_17700 IPR004115 GAD-like domain superfamily CDA09_17700 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CDA09_17700 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CDA09_17700 IPR006195 Aminoacyl-tRNA synthetase, class II CDA09_17700 IPR004524 Aspartate-tRNA ligase, type 1 CDA09_17720 IPR015797 NUDIX hydrolase-like domain superfamily CDA09_17720 IPR020084 NUDIX hydrolase, conserved site CDA09_17720 IPR003564 Dihydroneopterin triphosphate diphosphatase CDA09_17720 IPR000086 NUDIX hydrolase domain CDA09_17725 IPR002068 Alpha crystallin/Hsp20 domain CDA09_17725 IPR008978 HSP20-like chaperone CDA09_17730 IPR041727 N-Acetyl-L-glutamate kinase, cyclic CDA09_17730 IPR001057 Glutamate/acetylglutamate kinase CDA09_17730 IPR001048 Aspartate/glutamate/uridylate kinase CDA09_17730 IPR037528 Acetylglutamate kinase ArgB CDA09_17730 IPR004662 Acetylglutamate kinase family CDA09_17730 IPR036393 Acetylglutamate kinase-like superfamily CDA09_17735 IPR020583 Inositol monophosphatase, metal-binding site CDA09_17735 IPR020550 Inositol monophosphatase, conserved site CDA09_17735 IPR000760 Inositol monophosphatase-like CDA09_17735 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ CDA09_17740 IPR036736 ACP-like superfamily CDA09_17740 IPR003231 Acyl carrier protein (ACP) CDA09_17740 IPR009081 Phosphopantetheine binding ACP domain CDA09_17745 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_17745 IPR020845 AMP-binding, conserved site CDA09_17745 IPR000873 AMP-dependent synthetase/ligase CDA09_17745 IPR042099 AMP-dependent synthetase-like superfamily CDA09_17750 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CDA09_17750 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CDA09_17750 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CDA09_17750 IPR002986 Diaminopimelate decarboxylase, LysA CDA09_17750 IPR029066 PLP-binding barrel CDA09_17750 IPR000183 Ornithine/DAP/Arg decarboxylase CDA09_17750 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CDA09_17755 IPR023614 Porin domain superfamily CDA09_17755 IPR001702 Porin, Gram-negative type CDA09_17755 IPR002299 Porin, Neisseria sp. type CDA09_17755 IPR033900 Porin domain, Gram-negative type CDA09_17760 IPR033900 Porin domain, Gram-negative type CDA09_17760 IPR023614 Porin domain superfamily CDA09_17760 IPR001702 Porin, Gram-negative type CDA09_17760 IPR002299 Porin, Neisseria sp. type CDA09_17765 IPR007627 RNA polymerase sigma-70 region 2 CDA09_17765 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria CDA09_17765 IPR000943 RNA polymerase sigma-70 CDA09_17765 IPR007630 RNA polymerase sigma-70 region 4 CDA09_17765 IPR013325 RNA polymerase sigma factor, region 2 CDA09_17765 IPR014284 RNA polymerase sigma-70 like domain CDA09_17765 IPR009042 RNA polymerase sigma-70 region 1.2 CDA09_17765 IPR013324 RNA polymerase sigma factor, region 3/4-like CDA09_17770 IPR003782 Copper chaperone SCO1/SenC CDA09_17770 IPR036249 Thioredoxin-like superfamily CDA09_17775 IPR000537 UbiA prenyltransferase family CDA09_17775 IPR006369 Protohaem IX farnesyltransferase CDA09_17775 IPR030470 UbiA prenyltransferase conserved site CDA09_17795 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CDA09_17795 IPR035973 Cytochrome c oxidase subunit III-like superfamily CDA09_17795 IPR000298 Cytochrome c oxidase subunit III-like CDA09_17795 IPR033945 Cytochrome c oxidase subunit III domain CDA09_17795 IPR024791 Cytochrome c oxidase subunit III CDA09_17805 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily CDA09_17805 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 CDA09_17810 IPR014241 Cytochrome c oxidase, subunit I bacterial type CDA09_17810 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CDA09_17810 IPR000883 Cytochrome c oxidase subunit I CDA09_17810 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CDA09_17810 IPR033944 Cytochrome c oxidase subunit I domain CDA09_17810 IPR023616 Cytochrome c oxidase-like, subunit I domain CDA09_17815 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CDA09_17815 IPR001505 Copper centre Cu(A) CDA09_17815 IPR008972 Cupredoxin CDA09_17815 IPR014222 Cytochrome c oxidase, subunit II CDA09_17815 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CDA09_17815 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CDA09_17820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_17820 IPR011914 RfaE bifunctional protein, domain II CDA09_17820 IPR004821 Cytidyltransferase-like domain CDA09_17825 IPR035919 EAL domain superfamily CDA09_17825 IPR001633 EAL domain CDA09_17825 IPR005330 MHYT domain CDA09_17825 IPR029787 Nucleotide cyclase CDA09_17825 IPR000160 GGDEF domain CDA09_17835 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CDA09_17835 IPR018982 RQC domain CDA09_17835 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_17835 IPR010997 HRDC-like superfamily CDA09_17835 IPR004589 DNA helicase, ATP-dependent, RecQ type CDA09_17835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17835 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CDA09_17835 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_17835 IPR002121 HRDC domain CDA09_17835 IPR011545 DEAD/DEAH box helicase domain CDA09_17835 IPR001650 Helicase, C-terminal CDA09_17840 IPR035919 EAL domain superfamily CDA09_17840 IPR001633 EAL domain CDA09_17840 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing CDA09_17840 IPR013976 Metal-dependent hydrolase HDOD CDA09_17845 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CDA09_17845 IPR002524 Cation efflux protein CDA09_17845 IPR027470 Cation efflux protein, cytoplasmic domain CDA09_17845 IPR027469 Cation efflux transmembrane domain superfamily CDA09_17855 IPR033524 Leu/Phe/Val dehydrogenases active site CDA09_17855 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CDA09_17855 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CDA09_17855 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal CDA09_17855 IPR036291 NAD(P)-binding domain superfamily CDA09_17855 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CDA09_17865 IPR020845 AMP-binding, conserved site CDA09_17865 IPR042099 AMP-dependent synthetase-like superfamily CDA09_17865 IPR010071 Amino acid adenylation domain CDA09_17865 IPR020802 Polyketide synthase, thioesterase domain CDA09_17865 IPR009081 Phosphopantetheine binding ACP domain CDA09_17865 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_17865 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CDA09_17865 IPR000873 AMP-dependent synthetase/ligase CDA09_17865 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CDA09_17865 IPR036736 ACP-like superfamily CDA09_17865 IPR029058 Alpha/Beta hydrolase fold CDA09_17865 IPR001242 Condensation domain CDA09_17865 IPR001031 Thioesterase CDA09_17880 IPR018060 DNA binding HTH domain, AraC-type CDA09_17880 IPR014710 RmlC-like jelly roll fold CDA09_17880 IPR037923 Transcription regulator HTH-like CDA09_17880 IPR009057 Homeobox-like domain superfamily CDA09_17880 IPR003313 AraC-type arabinose-binding/dimerisation domain CDA09_17885 IPR013126 Heat shock protein 70 family CDA09_17885 IPR010236 ISC system FeS cluster assembly, HscA chaperone CDA09_17885 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CDA09_17885 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CDA09_17885 IPR018181 Heat shock protein 70, conserved site CDA09_17885 IPR042039 HscA chaperone, nucleotide-binding domain CDA09_17890 IPR028082 Periplasmic binding protein-like I CDA09_17890 IPR028081 Leucine-binding protein domain CDA09_17890 IPR000709 Leu/Ile/Val-binding protein CDA09_17895 IPR001851 ABC transporter, permease CDA09_17900 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CDA09_17900 IPR001851 ABC transporter, permease CDA09_17905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17905 IPR003593 AAA+ ATPase domain CDA09_17905 IPR003439 ABC transporter-like CDA09_17905 IPR017871 ABC transporter, conserved site CDA09_17905 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_17910 IPR017871 ABC transporter, conserved site CDA09_17910 IPR003439 ABC transporter-like CDA09_17910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17910 IPR003593 AAA+ ATPase domain CDA09_17910 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_17925 IPR035891 CheY-binding domain of CheA CDA09_17925 IPR036061 CheW-like domain superfamily CDA09_17925 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_17925 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_17925 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CDA09_17925 IPR004105 Histidine kinase CheA-like, homodimeric domain CDA09_17925 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDA09_17925 IPR002545 CheW-like domain CDA09_17925 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily CDA09_17925 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_17925 IPR005467 Histidine kinase domain CDA09_17925 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_17925 IPR036641 HPT domain superfamily CDA09_17925 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding CDA09_17930 IPR011006 CheY-like superfamily CDA09_17930 IPR001789 Signal transduction response regulator, receiver domain CDA09_17940 IPR000485 AsnC-type HTH domain CDA09_17940 IPR019888 Transcription regulator AsnC-type CDA09_17940 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDA09_17940 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDA09_17940 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_17940 IPR036390 Winged helix DNA-binding domain superfamily CDA09_17940 IPR011008 Dimeric alpha-beta barrel CDA09_17945 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDA09_17950 IPR002569 Peptide methionine sulphoxide reductase MsrA CDA09_17950 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CDA09_17955 IPR007452 Translocation and assembly module TamB CDA09_17960 IPR013785 Aldolase-type TIM barrel CDA09_17960 IPR011060 Ribulose-phosphate binding barrel CDA09_17960 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CDA09_17960 IPR013798 Indole-3-glycerol phosphate synthase CDA09_17965 IPR005940 Anthranilate phosphoribosyl transferase CDA09_17965 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CDA09_17965 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CDA09_17965 IPR017459 Glycosyl transferase family 3, N-terminal domain CDA09_17965 IPR000312 Glycosyl transferase, family 3 CDA09_17970 IPR029062 Class I glutamine amidotransferase-like CDA09_17970 IPR017926 Glutamine amidotransferase CDA09_17970 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CDA09_17975 IPR015890 Chorismate-utilising enzyme, C-terminal CDA09_17975 IPR005801 ADC synthase CDA09_17975 IPR006805 Anthranilate synthase component I, N-terminal CDA09_17975 IPR005256 Anthranilate synthase component I, PabB-like CDA09_17975 IPR019999 Anthranilate synthase component I-like CDA09_17980 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDA09_17980 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CDA09_17980 IPR037512 Phosphoglycolate phosphatase, prokaryotic CDA09_17980 IPR006439 HAD hydrolase, subfamily IA CDA09_17980 IPR036412 HAD-like superfamily CDA09_17980 IPR041492 Haloacid dehalogenase-like hydrolase CDA09_17980 IPR023214 HAD superfamily CDA09_17990 IPR042181 Type II secretion system, protein E, N-terminal CDA09_17990 IPR007831 General secretory system II, protein E, N-terminal CDA09_17990 IPR037257 General secretory system II, protein E, N-terminal superfamily CDA09_17990 IPR001482 Type II/IV secretion system protein CDA09_17990 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_17990 IPR013374 ATPase, type IV, pilus assembly, PilB CDA09_17995 IPR013471 Ribonuclease Z/BN CDA09_17995 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_17995 IPR001279 Metallo-beta-lactamase CDA09_18000 IPR008984 SMAD/FHA domain superfamily CDA09_18000 IPR000253 Forkhead-associated (FHA) domain CDA09_18005 IPR001932 PPM-type phosphatase domain CDA09_18005 IPR036457 PPM-type phosphatase domain superfamily CDA09_18005 IPR015655 Protein phosphatase 2C family CDA09_18010 IPR023401 Ornithine cyclodeaminase, N-terminal CDA09_18010 IPR003462 Ornithine cyclodeaminase/mu-crystallin CDA09_18010 IPR036291 NAD(P)-binding domain superfamily CDA09_18010 IPR014334 Ectoine utilization protein EutC CDA09_18015 IPR004681 TRAP transporter large membrane protein DctM CDA09_18015 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDA09_18020 IPR007387 TRAP transporter, small membrane protein DctQ CDA09_18025 IPR038404 TRAP transporter solute receptor DctP superfamily CDA09_18025 IPR018389 TRAP transporter solute receptor DctP/TeaA CDA09_18025 IPR004682 TRAP transporter solute receptor, DctP family CDA09_18030 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_18030 IPR000014 PAS domain CDA09_18030 IPR013767 PAS fold CDA09_18030 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_18030 IPR005467 Histidine kinase domain CDA09_18030 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_18030 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_18030 IPR035965 PAS domain superfamily CDA09_18030 IPR001610 PAC motif CDA09_18030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_18030 IPR000700 PAS-associated, C-terminal CDA09_18035 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_18035 IPR000792 Transcription regulator LuxR, C-terminal CDA09_18035 IPR001789 Signal transduction response regulator, receiver domain CDA09_18035 IPR011006 CheY-like superfamily CDA09_18040 IPR025708 Heat shock protein 15 CDA09_18040 IPR036986 RNA-binding S4 domain superfamily CDA09_18040 IPR002942 RNA-binding S4 domain CDA09_18045 IPR012094 tRNA(Ile)-lysidine synthase CDA09_18045 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal CDA09_18045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_18045 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal CDA09_18045 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain CDA09_18045 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CDA09_18050 IPR001095 Acetyl-CoA carboxylase, alpha subunit CDA09_18050 IPR029045 ClpP/crotonase-like domain superfamily CDA09_18050 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CDA09_18055 IPR036318 FAD-binding, type PCMH-like superfamily CDA09_18055 IPR005170 Transporter-associated domain CDA09_18055 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_18055 IPR000644 CBS domain CDA09_18055 IPR002550 CNNM, transmembrane domain CDA09_18060 IPR006068 Cation-transporting P-type ATPase, C-terminal CDA09_18060 IPR004014 Cation-transporting P-type ATPase, N-terminal CDA09_18060 IPR023299 P-type ATPase, cytoplasmic domain N CDA09_18060 IPR018303 P-type ATPase, phosphorylation site CDA09_18060 IPR023298 P-type ATPase, transmembrane domain superfamily CDA09_18060 IPR008250 P-type ATPase, A domain superfamily CDA09_18060 IPR036412 HAD-like superfamily CDA09_18060 IPR023214 HAD superfamily CDA09_18060 IPR005782 P-type ATPase, subfamily IIA, SERCA-type CDA09_18060 IPR001757 P-type ATPase CDA09_18065 IPR006213 Bax inhibitor 1, conserved site CDA09_18065 IPR006214 Bax inhibitor 1-related CDA09_18080 IPR042118 QueA, domain 1 CDA09_18080 IPR042119 QueA, domain 2 CDA09_18080 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily CDA09_18080 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CDA09_18085 IPR004803 tRNA-guanine transglycosylase CDA09_18085 IPR002616 tRNA-guanine(15) transglycosylase-like CDA09_18085 IPR036511 Queuine tRNA-ribosyltransferase-like CDA09_18090 IPR003849 Preprotein translocase YajC CDA09_18095 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDA09_18095 IPR001036 Acriflavin resistance protein CDA09_18095 IPR005791 Protein translocase subunit SecD CDA09_18095 IPR027398 SecD export protein N-terminal TM domain CDA09_18095 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CDA09_18095 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CDA09_18100 IPR005665 Protein-export membrane protein SecF, bacterial CDA09_18100 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDA09_18100 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CDA09_18100 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CDA09_18105 IPR002771 Multiple antibiotic resistance (MarC)-related CDA09_18115 IPR013539 Adenylosuccinate lyase PurB, C-terminal CDA09_18115 IPR004769 Adenylosuccinate lyase CDA09_18115 IPR008948 L-Aspartase-like CDA09_18115 IPR022761 Fumarate lyase, N-terminal CDA09_18115 IPR000362 Fumarate lyase family CDA09_18115 IPR024083 Fumarase/histidase, N-terminal CDA09_18115 IPR020557 Fumarate lyase, conserved site CDA09_18120 IPR007474 ApaG domain CDA09_18120 IPR036767 ApaG domain superfamily CDA09_18120 IPR023065 Uncharacterised protein family ApaG CDA09_18125 IPR001789 Signal transduction response regulator, receiver domain CDA09_18125 IPR035965 PAS domain superfamily CDA09_18125 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_18125 IPR000700 PAS-associated, C-terminal CDA09_18125 IPR000014 PAS domain CDA09_18125 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_18125 IPR011006 CheY-like superfamily CDA09_18125 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_18125 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_18125 IPR001610 PAC motif CDA09_18125 IPR005467 Histidine kinase domain CDA09_18125 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_18130 IPR016117 ArgJ-like domain superfamily CDA09_18130 IPR042195 ArgJ beta chain, C-terminal domain CDA09_18130 IPR002813 Arginine biosynthesis protein ArgJ CDA09_18140 IPR036266 SecA, Wing/Scaffold superfamily CDA09_18140 IPR036670 SecA, preprotein cross-linking domain superfamily CDA09_18140 IPR011130 SecA, preprotein cross-linking domain CDA09_18140 IPR014018 SecA motor DEAD CDA09_18140 IPR011115 SecA DEAD-like, N-terminal CDA09_18140 IPR020937 SecA conserved site CDA09_18140 IPR000185 Protein translocase subunit SecA CDA09_18140 IPR011116 SecA Wing/Scaffold CDA09_18140 IPR004027 SEC-C motif CDA09_18140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18155 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CDA09_18155 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CDA09_18155 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CDA09_18155 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_18160 IPR008280 Tubulin/FtsZ, C-terminal CDA09_18160 IPR000158 Cell division protein FtsZ CDA09_18160 IPR020805 Cell division protein FtsZ, conserved site CDA09_18160 IPR024757 Cell division protein FtsZ, C-terminal CDA09_18160 IPR003008 Tubulin/FtsZ, GTPase domain CDA09_18160 IPR036525 Tubulin/FtsZ, GTPase domain superfamily CDA09_18160 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CDA09_18165 IPR003494 SHS2 domain inserted in FtsA CDA09_18165 IPR020823 Cell division protein FtsA CDA09_18170 IPR013685 POTRA domain, FtsQ-type CDA09_18170 IPR005548 Cell division protein FtsQ/DivIB CDA09_18170 IPR026579 Cell division protein FtsQ CDA09_18170 IPR034746 POTRA domain CDA09_18175 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CDA09_18175 IPR013815 ATP-grasp fold, subdomain 1 CDA09_18175 IPR011761 ATP-grasp fold CDA09_18175 IPR016185 Pre-ATP-grasp domain superfamily CDA09_18175 IPR011095 D-alanine--D-alanine ligase, C-terminal CDA09_18175 IPR005905 D-alanine--D-alanine ligase CDA09_18175 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CDA09_18180 IPR013221 Mur ligase, central CDA09_18180 IPR036615 Mur ligase, C-terminal domain superfamily CDA09_18180 IPR004101 Mur ligase, C-terminal CDA09_18180 IPR036565 Mur-like, catalytic domain superfamily CDA09_18180 IPR000713 Mur ligase, N-terminal catalytic domain CDA09_18180 IPR005758 UDP-N-acetylmuramate--L-alanine ligase CDA09_18185 IPR004276 Glycosyltransferase family 28, N-terminal domain CDA09_18185 IPR007235 Glycosyl transferase, family 28, C-terminal CDA09_18185 IPR006009 N-acetylglucosaminyltransferase, MurG CDA09_18190 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CDA09_18190 IPR013437 Probable peptidoglycan glycosyltransferase FtsW CDA09_18195 IPR013221 Mur ligase, central CDA09_18195 IPR036615 Mur ligase, C-terminal domain superfamily CDA09_18195 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CDA09_18195 IPR036565 Mur-like, catalytic domain superfamily CDA09_18200 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CDA09_18200 IPR000715 Glycosyl transferase, family 4 CDA09_18200 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CDA09_18205 IPR013221 Mur ligase, central CDA09_18205 IPR036615 Mur ligase, C-terminal domain superfamily CDA09_18205 IPR035911 MurE/MurF, N-terminal CDA09_18205 IPR004101 Mur ligase, C-terminal CDA09_18205 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CDA09_18205 IPR036565 Mur-like, catalytic domain superfamily CDA09_18205 IPR000713 Mur ligase, N-terminal catalytic domain CDA09_18210 IPR035911 MurE/MurF, N-terminal CDA09_18210 IPR004101 Mur ligase, C-terminal CDA09_18210 IPR000713 Mur ligase, N-terminal catalytic domain CDA09_18210 IPR013221 Mur ligase, central CDA09_18210 IPR036615 Mur ligase, C-terminal domain superfamily CDA09_18210 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CDA09_18210 IPR036565 Mur-like, catalytic domain superfamily CDA09_18215 IPR012338 Beta-lactamase/transpeptidase-like CDA09_18215 IPR001460 Penicillin-binding protein, transpeptidase CDA09_18215 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CDA09_18215 IPR037532 Peptidoglycan D,D-transpeptidase FtsI CDA09_18215 IPR005311 Penicillin-binding protein, dimerisation domain CDA09_18225 IPR002903 Ribosomal RNA small subunit methyltransferase H CDA09_18225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18225 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily CDA09_18230 IPR003444 Transcriptional regulator MraZ CDA09_18230 IPR035644 MraZ, C-terminal CDA09_18230 IPR035642 MraZ, N-terminal CDA09_18230 IPR007159 SpoVT-AbrB domain CDA09_18230 IPR038619 MraZ superfamily CDA09_18230 IPR020603 MraZ domain CDA09_18230 IPR037914 SpoVT-AbrB domain superfamily CDA09_18245 IPR006680 Amidohydrolase-related CDA09_18245 IPR004721 Dihydroorotase homodimeric type CDA09_18245 IPR002195 Dihydroorotase, conserved site CDA09_18245 IPR032466 Metal-dependent hydrolase CDA09_18250 IPR014776 Tetrapyrrole methylase, subdomain 2 CDA09_18250 IPR000878 Tetrapyrrole methylase CDA09_18250 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CDA09_18250 IPR014777 Tetrapyrrole methylase, subdomain 1 CDA09_18250 IPR008189 rRNA small subunit methyltransferase I CDA09_18250 IPR035996 Tetrapyrrole methylase superfamily CDA09_18255 IPR011856 tRNA endonuclease-like domain superfamily CDA09_18255 IPR011335 Restriction endonuclease type II-like CDA09_18255 IPR003509 Uncharacterised protein family UPF0102 CDA09_18260 IPR001347 Sugar isomerase (SIS) CDA09_18260 IPR004515 Phosphoheptose isomerase CDA09_18260 IPR035461 GmhA/DiaA CDA09_18265 IPR007055 BON domain CDA09_18265 IPR014004 Transport-associated and nodulation domain, bacteria CDA09_18270 IPR004101 Mur ligase, C-terminal CDA09_18270 IPR013221 Mur ligase, central CDA09_18270 IPR036615 Mur ligase, C-terminal domain superfamily CDA09_18270 IPR005757 Murein peptide ligase CDA09_18270 IPR000713 Mur ligase, N-terminal catalytic domain CDA09_18270 IPR036565 Mur-like, catalytic domain superfamily CDA09_18280 IPR024706 Peroxiredoxin, AhpC-type CDA09_18280 IPR036249 Thioredoxin-like superfamily CDA09_18280 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDA09_18280 IPR013766 Thioredoxin domain CDA09_18285 IPR001874 Dehydroquinase, class II CDA09_18285 IPR018509 Dehydroquinase, class II, conserved site CDA09_18285 IPR036441 Dehydroquinase, class II superfamily CDA09_18290 IPR001882 Biotin-binding site CDA09_18290 IPR011053 Single hybrid motif CDA09_18290 IPR001249 Acetyl-CoA biotin carboxyl carrier CDA09_18290 IPR000089 Biotin/lipoyl attachment CDA09_18295 IPR011054 Rudiment single hybrid motif CDA09_18295 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDA09_18295 IPR005482 Biotin carboxylase, C-terminal CDA09_18295 IPR011764 Biotin carboxylation domain CDA09_18295 IPR016185 Pre-ATP-grasp domain superfamily CDA09_18295 IPR005481 Biotin carboxylase-like, N-terminal domain CDA09_18295 IPR013815 ATP-grasp fold, subdomain 1 CDA09_18295 IPR011761 ATP-grasp fold CDA09_18295 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CDA09_18300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18300 IPR004498 Ribosomal protein L11 methyltransferase CDA09_18310 IPR000829 DAGK family CDA09_18310 IPR033718 Diacylglycerol kinase, prokaryotic CDA09_18310 IPR036945 Diacylglycerol kinase (DAGK) superfamily CDA09_18315 IPR008816 Glycine zipper 2TM domain CDA09_18320 IPR029056 Ribokinase-like CDA09_18320 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CDA09_18320 IPR011611 Carbohydrate kinase PfkB CDA09_18325 IPR019808 Histidine triad, conserved site CDA09_18325 IPR001310 Histidine triad (HIT) protein CDA09_18325 IPR036265 HIT-like superfamily CDA09_18325 IPR011146 HIT-like domain CDA09_18325 IPR039384 HINT family CDA09_18340 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) CDA09_18340 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CDA09_18340 IPR029052 Metallo-dependent phosphatase-like CDA09_18345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18345 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CDA09_18345 IPR036291 NAD(P)-binding domain superfamily CDA09_18350 IPR000715 Glycosyl transferase, family 4 CDA09_18350 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CDA09_18355 IPR036291 NAD(P)-binding domain superfamily CDA09_18355 IPR001509 NAD-dependent epimerase/dehydratase CDA09_18360 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_18375 IPR010233 Ubiquinone biosynthesis O-methyltransferase CDA09_18375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18380 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CDA09_18380 IPR002797 Polysaccharide biosynthesis protein CDA09_18385 IPR001296 Glycosyl transferase, family 1 CDA09_18385 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CDA09_18395 IPR016040 NAD(P)-binding domain CDA09_18395 IPR036291 NAD(P)-binding domain superfamily CDA09_18400 IPR016040 NAD(P)-binding domain CDA09_18400 IPR036291 NAD(P)-binding domain superfamily CDA09_18400 IPR006368 GDP-mannose 4,6-dehydratase CDA09_18405 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE CDA09_18405 IPR000390 Small multidrug resistance protein family CDA09_18420 IPR011051 RmlC-like cupin domain superfamily CDA09_18420 IPR014710 RmlC-like jelly roll fold CDA09_18420 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related CDA09_18425 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CDA09_18425 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_18425 IPR005835 Nucleotidyl transferase domain CDA09_18430 IPR005888 dTDP-glucose 4,6-dehydratase CDA09_18430 IPR036291 NAD(P)-binding domain superfamily CDA09_18430 IPR016040 NAD(P)-binding domain CDA09_18445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18445 IPR013216 Methyltransferase type 11 CDA09_18450 IPR003439 ABC transporter-like CDA09_18450 IPR003593 AAA+ ATPase domain CDA09_18450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18450 IPR029439 Wzt, C-terminal CDA09_18460 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_18460 IPR005835 Nucleotidyl transferase domain CDA09_18460 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal CDA09_18460 IPR011051 RmlC-like cupin domain superfamily CDA09_18460 IPR014710 RmlC-like jelly roll fold CDA09_18460 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase CDA09_18465 IPR001509 NAD-dependent epimerase/dehydratase CDA09_18465 IPR036291 NAD(P)-binding domain superfamily CDA09_18470 IPR001296 Glycosyl transferase, family 1 CDA09_18470 IPR039901 3-deoxy-D-manno-octulosonic acid transferase CDA09_18470 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily CDA09_18470 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CDA09_18485 IPR003423 Outer membrane efflux protein CDA09_18485 IPR010130 Type I secretion outer membrane protein, TolC CDA09_18490 IPR001763 Rhodanese-like domain CDA09_18490 IPR036873 Rhodanese-like domain superfamily CDA09_18495 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CDA09_18495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18500 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_18500 IPR001036 Acriflavin resistance protein CDA09_18510 IPR001647 DNA-binding HTH domain, TetR-type CDA09_18510 IPR009057 Homeobox-like domain superfamily CDA09_18510 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_18510 IPR032551 HTH-type transcriptional repressor, C-terminal CDA09_18515 IPR018338 Carbonic anhydrase, alpha-class, conserved site CDA09_18515 IPR023561 Carbonic anhydrase, alpha-class CDA09_18515 IPR041891 Carbonic anhydrase, prokaryotic-like CDA09_18515 IPR001148 Alpha carbonic anhydrase domain CDA09_18515 IPR036398 Alpha carbonic anhydrase domain superfamily CDA09_18520 IPR001727 Gdt1 family CDA09_18525 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CDA09_18525 IPR029056 Ribokinase-like CDA09_18525 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CDA09_18530 IPR038521 ThiC/Bza superfamily CDA09_18530 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B CDA09_18530 IPR025747 ThiC-associated domain CDA09_18530 IPR037509 Phosphomethylpyrimidine synthase CDA09_18545 IPR008867 Thiazole synthase CDA09_18545 IPR033983 Thiazole synthase ThiG CDA09_18545 IPR013785 Aldolase-type TIM barrel CDA09_18550 IPR008867 Thiazole synthase CDA09_18550 IPR013785 Aldolase-type TIM barrel CDA09_18550 IPR010035 ThiS, thiamine-biosynthesis CDA09_18550 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_18550 IPR012675 Beta-grasp domain superfamily CDA09_18550 IPR033983 Thiazole synthase ThiG CDA09_18550 IPR003749 Sulfur carrier ThiS/MoaD-like CDA09_18555 IPR013785 Aldolase-type TIM barrel CDA09_18555 IPR003698 Lipoyl synthase CDA09_18555 IPR007197 Radical SAM CDA09_18555 IPR006638 Elp3/MiaB/NifB CDA09_18560 IPR029058 Alpha/Beta hydrolase fold CDA09_18560 IPR000073 Alpha/beta hydrolase fold-1 CDA09_18560 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDA09_18560 IPR011053 Single hybrid motif CDA09_18560 IPR000089 Biotin/lipoyl attachment CDA09_18565 IPR005475 Transketolase-like, pyrimidine-binding domain CDA09_18565 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CDA09_18565 IPR033248 Transketolase, C-terminal domain CDA09_18565 IPR029061 Thiamin diphosphate-binding fold CDA09_18570 IPR029061 Thiamin diphosphate-binding fold CDA09_18570 IPR001017 Dehydrogenase, E1 component CDA09_18590 IPR005119 LysR, substrate-binding CDA09_18590 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_18590 IPR000847 Transcription regulator HTH, LysR CDA09_18590 IPR036390 Winged helix DNA-binding domain superfamily CDA09_18595 IPR042099 AMP-dependent synthetase-like superfamily CDA09_18595 IPR020845 AMP-binding, conserved site CDA09_18595 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_18595 IPR000873 AMP-dependent synthetase/ligase CDA09_18610 IPR003474 Gluconate transporter CDA09_18620 IPR036909 Cytochrome c-like domain superfamily CDA09_18620 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDA09_18620 IPR002372 Pyrrolo-quinoline quinone repeat CDA09_18620 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family CDA09_18620 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDA09_18620 IPR001479 Quinoprotein dehydrogenase, conserved site CDA09_18620 IPR009056 Cytochrome c-like domain CDA09_18635 IPR005358 Putative zinc- or iron-chelating domain containing protein CDA09_18640 IPR003824 Undecaprenyl-diphosphatase UppP CDA09_18645 IPR029058 Alpha/Beta hydrolase fold CDA09_18645 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CDA09_18650 IPR023576 UbiE/COQ5 methyltransferase, conserved site CDA09_18650 IPR004033 UbiE/COQ5 methyltransferase CDA09_18650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18655 IPR000620 EamA domain CDA09_18655 IPR004626 RarD protein CDA09_18660 IPR012340 Nucleic acid-binding, OB-fold CDA09_18660 IPR001900 Ribonuclease II/R CDA09_18670 IPR041121 SDH, C-terminal CDA09_18670 IPR036291 NAD(P)-binding domain superfamily CDA09_18670 IPR011342 Shikimate dehydrogenase CDA09_18670 IPR022893 Shikimate dehydrogenase family CDA09_18670 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CDA09_18670 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CDA09_18675 IPR001264 Glycosyl transferase, family 51 CDA09_18675 IPR011812 Biosynthetic peptidoglycan transglycosylase CDA09_18675 IPR036950 Penicillin binding protein transglycosylase domain CDA09_18675 IPR023346 Lysozyme-like domain superfamily CDA09_18680 IPR038076 MgtE, N-terminal domain superfamily CDA09_18680 IPR006669 Magnesium transporter MgtE CDA09_18680 IPR006668 Magnesium transporter, MgtE intracellular domain CDA09_18680 IPR000644 CBS domain CDA09_18680 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily CDA09_18680 IPR006667 SLC41 divalent cation transporters, integral membrane domain CDA09_18680 IPR038048 Magnesium transporter MgtE, transmembrane domain CDA09_18685 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_18685 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_18685 IPR005814 Aminotransferase class-III CDA09_18685 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_18685 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CDA09_18690 IPR036206 Thiamin phosphate synthase superfamily CDA09_18690 IPR022998 Thiamine phosphate synthase/TenI CDA09_18690 IPR034291 Thiamine phosphate synthase CDA09_18690 IPR013785 Aldolase-type TIM barrel CDA09_18695 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CDA09_18695 IPR029056 Ribokinase-like CDA09_18695 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CDA09_18700 IPR001789 Signal transduction response regulator, receiver domain CDA09_18700 IPR011006 CheY-like superfamily CDA09_18705 IPR011006 CheY-like superfamily CDA09_18705 IPR001789 Signal transduction response regulator, receiver domain CDA09_18715 IPR003660 HAMP domain CDA09_18715 IPR029095 NarX-like, N-terminal CDA09_18715 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDA09_18715 IPR004090 Chemotaxis methyl-accepting receptor CDA09_18720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_18720 IPR036641 HPT domain superfamily CDA09_18720 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDA09_18720 IPR004105 Histidine kinase CheA-like, homodimeric domain CDA09_18720 IPR005467 Histidine kinase domain CDA09_18720 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CDA09_18720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_18720 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_18720 IPR035891 CheY-binding domain of CheA CDA09_18720 IPR015162 CheY binding CDA09_18720 IPR002545 CheW-like domain CDA09_18720 IPR036061 CheW-like domain superfamily CDA09_18720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_18730 IPR003774 Protein of unknown function UPF0301 CDA09_18735 IPR037027 YqgF/RNase H-like domain superfamily CDA09_18735 IPR012337 Ribonuclease H-like superfamily CDA09_18735 IPR005227 Putative pre-16S rRNA nuclease CDA09_18735 IPR006641 YqgF/RNase H-like domain CDA09_18740 IPR023050 Bifunctional protein PyrR CDA09_18740 IPR000836 Phosphoribosyltransferase domain CDA09_18740 IPR029057 Phosphoribosyltransferase-like CDA09_18745 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CDA09_18745 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CDA09_18745 IPR002082 Aspartate carbamoyltransferase CDA09_18745 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CDA09_18745 IPR006130 Aspartate/ornithine carbamoyltransferase CDA09_18750 IPR011059 Metal-dependent hydrolase, composite domain superfamily CDA09_18750 IPR004722 Dihydroorotase CDA09_18750 IPR006680 Amidohydrolase-related CDA09_18750 IPR032466 Metal-dependent hydrolase CDA09_18755 IPR003746 Protein of unknown function DUF167 CDA09_18755 IPR036591 YggU-like superfamily CDA09_18755 IPR005228 Conserved hypothetical protein CHP00251 CDA09_18760 IPR003425 CCB3/YggT CDA09_18765 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_18765 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CDA09_18765 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDA09_18765 IPR036291 NAD(P)-binding domain superfamily CDA09_18765 IPR000304 Pyrroline-5-carboxylate reductase CDA09_18770 IPR001608 Alanine racemase, N-terminal CDA09_18770 IPR029066 PLP-binding barrel CDA09_18770 IPR011078 Pyridoxal phosphate homeostasis protein CDA09_18775 IPR001482 Type II/IV secretion system protein CDA09_18775 IPR006321 Pilus retraction protein PilT CDA09_18775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18775 IPR003593 AAA+ ATPase domain CDA09_18780 IPR001482 Type II/IV secretion system protein CDA09_18780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18780 IPR006321 Pilus retraction protein PilT CDA09_18780 IPR003593 AAA+ ATPase domain CDA09_18785 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDA09_18785 IPR000241 Putative RNA methylase domain CDA09_18785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_18785 IPR004114 THUMP domain CDA09_18800 IPR017938 Riboflavin synthase-like beta-barrel CDA09_18800 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDA09_18800 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDA09_18800 IPR017927 FAD-binding domain, ferredoxin reductase-type CDA09_18800 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDA09_18800 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_18800 IPR012675 Beta-grasp domain superfamily CDA09_18800 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_18800 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_18805 IPR001633 EAL domain CDA09_18805 IPR013976 Metal-dependent hydrolase HDOD CDA09_18805 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing CDA09_18805 IPR035919 EAL domain superfamily CDA09_18810 IPR002324 Cytochrome c, class ID CDA09_18810 IPR036909 Cytochrome c-like domain superfamily CDA09_18810 IPR009056 Cytochrome c-like domain CDA09_18815 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal CDA09_18815 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CDA09_18815 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 CDA09_18820 IPR003423 Outer membrane efflux protein CDA09_18820 IPR010130 Type I secretion outer membrane protein, TolC CDA09_18830 IPR035919 EAL domain superfamily CDA09_18830 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CDA09_18830 IPR001633 EAL domain CDA09_18840 IPR001789 Signal transduction response regulator, receiver domain CDA09_18840 IPR011006 CheY-like superfamily CDA09_18840 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_18840 IPR000792 Transcription regulator LuxR, C-terminal CDA09_18845 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_18845 IPR010129 Type I secretion membrane fusion protein, HlyD family CDA09_18850 IPR017871 ABC transporter, conserved site CDA09_18850 IPR011527 ABC transporter type 1, transmembrane domain CDA09_18850 IPR003593 AAA+ ATPase domain CDA09_18850 IPR010132 ATPase, type I secretion system, HlyB CDA09_18850 IPR003439 ABC transporter-like CDA09_18850 IPR005074 Peptidase C39, bacteriocin processing CDA09_18850 IPR039395 Peptidase C39-like A CDA09_18850 IPR039421 Type I protein exporter CDA09_18850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18850 IPR036640 ABC transporter type 1, transmembrane domain superfamily CDA09_18855 IPR002481 Ferric-uptake regulator CDA09_18855 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_18855 IPR036390 Winged helix DNA-binding domain superfamily CDA09_18860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18860 IPR017871 ABC transporter, conserved site CDA09_18860 IPR003439 ABC transporter-like CDA09_18860 IPR003593 AAA+ ATPase domain CDA09_18865 IPR037294 ABC transporter, BtuC-like CDA09_18865 IPR001626 ABC transporter, TroCD-like CDA09_18870 IPR006129 Adhesin B CDA09_18870 IPR006127 Periplasmic solute binding protein, ZnuA-like CDA09_18870 IPR006128 Adhesion lipoprotein CDA09_18875 IPR004778 Homoserine/Threonine efflux protein CDA09_18875 IPR001123 Amino acid exporter protein, LeuE-type CDA09_18885 IPR036192 Cell division protein ZapA-like superfamily CDA09_18885 IPR007838 Cell division protein ZapA-like CDA09_18895 IPR042096 Dihydroxy-acid dehydratase, C-terminal CDA09_18895 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CDA09_18895 IPR004404 Dihydroxy-acid dehydratase CDA09_18895 IPR037237 IlvD/EDD, N-terminal domain CDA09_18895 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CDA09_18900 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_18900 IPR007432 Protein of unknown function DUF480 CDA09_18900 IPR036390 Winged helix DNA-binding domain superfamily CDA09_18905 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt CDA09_18915 IPR029787 Nucleotide cyclase CDA09_18915 IPR005330 MHYT domain CDA09_18915 IPR000160 GGDEF domain CDA09_18915 IPR001633 EAL domain CDA09_18915 IPR035919 EAL domain superfamily CDA09_18930 IPR011234 Fumarylacetoacetase-like, C-terminal CDA09_18930 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CDA09_18945 IPR009078 Ferritin-like superfamily CDA09_18945 IPR008331 Ferritin/DPS protein domain CDA09_18945 IPR012347 Ferritin-like CDA09_18945 IPR009040 Ferritin-like diiron domain CDA09_18945 IPR002024 Bacterioferritin CDA09_18955 IPR002898 MotA/TolQ/ExbB proton channel CDA09_18960 IPR003400 Biopolymer transport protein ExbD/TolR CDA09_18965 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_18965 IPR030190 Macrolide export protein MacA CDA09_18965 IPR006143 RND efflux pump, membrane fusion protein CDA09_18970 IPR003838 ABC transporter permease protein domain CDA09_18970 IPR003439 ABC transporter-like CDA09_18970 IPR017871 ABC transporter, conserved site CDA09_18970 IPR025857 MacB-like periplasmic core domain CDA09_18970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_18970 IPR003593 AAA+ ATPase domain CDA09_18970 IPR017911 ABC transporter, macrolide export, ATP-binding domain CDA09_18975 IPR003423 Outer membrane efflux protein CDA09_18975 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CDA09_18980 IPR018470 Periplasmic metal-binding protein Tp34-type CDA09_18980 IPR038482 Periplasmic metal-binding protein tp34-type superfamily CDA09_18995 IPR004923 Iron permease FTR1/Fip1/EfeU CDA09_19005 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDA09_19005 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_19005 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_19005 IPR036884 [2Fe-2S]-binding domain superfamily CDA09_19005 IPR002888 [2Fe-2S]-binding CDA09_19010 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDA09_19010 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CDA09_19010 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDA09_19010 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CDA09_19010 IPR006311 Twin-arginine translocation pathway, signal sequence CDA09_19010 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CDA09_19015 IPR010105 TonB-dependent siderophore receptor CDA09_19015 IPR000531 TonB-dependent receptor-like, beta-barrel CDA09_19015 IPR039423 TonB-dependent receptor-like CDA09_19015 IPR012910 TonB-dependent receptor, plug domain CDA09_19015 IPR037066 TonB-dependent receptor, plug domain superfamily CDA09_19015 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_19045 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_19045 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19045 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_19045 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19045 IPR005467 Histidine kinase domain CDA09_19045 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_19045 IPR006290 Heavy metal sensor kinase CDA09_19045 IPR003660 HAMP domain CDA09_19050 IPR001789 Signal transduction response regulator, receiver domain CDA09_19050 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response CDA09_19050 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_19050 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_19050 IPR039420 Transcriptional regulatory protein WalR-like CDA09_19050 IPR011006 CheY-like superfamily CDA09_19050 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_19075 IPR001036 Acriflavin resistance protein CDA09_19075 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CDA09_19075 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_19145 IPR012902 Prokaryotic N-terminal methylation site CDA09_19145 IPR001082 Fimbrial protein pilin CDA09_19155 IPR041705 VapC-like Sll0205 protein, PIN domain CDA09_19155 IPR022907 VapC family CDA09_19165 IPR022789 Antitoxin ParD CDA09_19165 IPR038296 Antitoxin ParD superfamily CDA09_19165 IPR010985 Ribbon-helix-helix CDA09_19210 IPR001789 Signal transduction response regulator, receiver domain CDA09_19210 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_19210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19210 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_19210 IPR025944 Sigma-54 interaction domain, conserved site CDA09_19210 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_19210 IPR002197 DNA binding HTH domain, Fis-type CDA09_19210 IPR009057 Homeobox-like domain superfamily CDA09_19210 IPR003593 AAA+ ATPase domain CDA09_19210 IPR011006 CheY-like superfamily CDA09_19215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19215 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_19215 IPR000014 PAS domain CDA09_19215 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_19215 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_19215 IPR005467 Histidine kinase domain CDA09_19215 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19225 IPR004839 Aminotransferase, class I/classII CDA09_19225 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_19225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_19225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_19230 IPR011559 Initiation factor 2B alpha/beta/delta CDA09_19230 IPR005251 Methylthioribose-1-phosphate isomerase CDA09_19230 IPR000649 Initiation factor 2B-related CDA09_19230 IPR037171 NagB/RpiA transferase-like CDA09_19235 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CDA09_19235 IPR001303 Class II aldolase/adducin N-terminal CDA09_19240 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CDA09_19240 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CDA09_19240 IPR036291 NAD(P)-binding domain superfamily CDA09_19240 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CDA09_19240 IPR006398 2-hydroxy-3-oxopropionate reductase CDA09_19240 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_19240 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CDA09_19240 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDA09_19245 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CDA09_19245 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDA09_19245 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CDA09_19245 IPR036291 NAD(P)-binding domain superfamily CDA09_19245 IPR006398 2-hydroxy-3-oxopropionate reductase CDA09_19245 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_19245 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CDA09_19245 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CDA09_19250 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CDA09_19250 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CDA09_19250 IPR017459 Glycosyl transferase family 3, N-terminal domain CDA09_19255 IPR011051 RmlC-like cupin domain superfamily CDA09_19255 IPR014710 RmlC-like jelly roll fold CDA09_19255 IPR012093 Pirin CDA09_19255 IPR008778 Pirin, C-terminal domain CDA09_19255 IPR003829 Pirin, N-terminal domain CDA09_19260 IPR029039 Flavoprotein-like superfamily CDA09_19260 IPR003680 Flavodoxin-like fold CDA09_19260 IPR023048 NADH-azoreductase, FMN-dependent CDA09_19265 IPR003752 Disulphide bond formation protein DsbB/BdbC CDA09_19265 IPR022920 Disulphide bond formation protein DsbB CDA09_19265 IPR023380 DsbB-like superfamily CDA09_19280 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_19280 IPR001036 Acriflavin resistance protein CDA09_19280 IPR022831 Multidrug resistance protein MdtB CDA09_19295 IPR000594 THIF-type NAD/FAD binding fold CDA09_19295 IPR035985 Ubiquitin-activating enzyme CDA09_19305 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_19305 IPR001279 Metallo-beta-lactamase CDA09_19310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_19310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_19310 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_19310 IPR004839 Aminotransferase, class I/classII CDA09_19310 IPR027619 Putative C-S lyase CDA09_19315 IPR003593 AAA+ ATPase domain CDA09_19315 IPR029016 GAF-like domain superfamily CDA09_19315 IPR009057 Homeobox-like domain superfamily CDA09_19315 IPR002197 DNA binding HTH domain, Fis-type CDA09_19315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19315 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_19315 IPR035965 PAS domain superfamily CDA09_19315 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_19315 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_19315 IPR025944 Sigma-54 interaction domain, conserved site CDA09_19315 IPR000014 PAS domain CDA09_19320 IPR037171 NagB/RpiA transferase-like CDA09_19320 IPR012791 3-oxoacid CoA-transferase, subunit B CDA09_19320 IPR004165 Coenzyme A transferase family I CDA09_19320 IPR004164 Coenzyme A transferase active site CDA09_19325 IPR012792 3-oxoacid CoA-transferase, subunit A CDA09_19325 IPR004165 Coenzyme A transferase family I CDA09_19325 IPR004163 Coenzyme A transferase binding site CDA09_19325 IPR037171 NagB/RpiA transferase-like CDA09_19330 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_19330 IPR020845 AMP-binding, conserved site CDA09_19330 IPR000873 AMP-dependent synthetase/ligase CDA09_19330 IPR011904 Acetate-CoA ligase CDA09_19330 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain CDA09_19330 IPR042099 AMP-dependent synthetase-like superfamily CDA09_19355 IPR016750 Acetophenone carboxylase beta subunit/Acetone carboxylase gamma subunit CDA09_19360 IPR003692 Hydantoinase B/oxoprolinase CDA09_19365 IPR008040 Hydantoinaseoxoprolinase, N-terminal CDA09_19365 IPR002821 Hydantoinase A/oxoprolinase CDA09_19370 IPR000424 Primosome PriB/single-strand DNA-binding CDA09_19370 IPR012340 Nucleic acid-binding, OB-fold CDA09_19370 IPR011344 Single-stranded DNA-binding protein CDA09_19375 IPR020846 Major facilitator superfamily domain CDA09_19375 IPR036259 MFS transporter superfamily CDA09_19375 IPR011701 Major facilitator superfamily CDA09_19380 IPR003439 ABC transporter-like CDA09_19380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19380 IPR004602 UvrABC system subunit A CDA09_19380 IPR017871 ABC transporter, conserved site CDA09_19380 IPR041552 UvrA DNA-binding domain CDA09_19380 IPR041102 UvrA, interaction domain CDA09_19390 IPR000456 Ribosomal protein L17 CDA09_19390 IPR036373 Ribosomal protein L17 superfamily CDA09_19395 IPR011260 RNA polymerase, alpha subunit, C-terminal CDA09_19395 IPR011773 DNA-directed RNA polymerase, alpha subunit CDA09_19395 IPR036643 DNA-directed RNA polymerase, insert domain superfamily CDA09_19395 IPR036603 RNA polymerase, RBP11-like subunit CDA09_19395 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CDA09_19395 IPR011262 DNA-directed RNA polymerase, insert domain CDA09_19400 IPR036986 RNA-binding S4 domain superfamily CDA09_19400 IPR002942 RNA-binding S4 domain CDA09_19400 IPR018079 Ribosomal protein S4, conserved site CDA09_19400 IPR005709 Ribosomal protein S4, bacterial-type CDA09_19400 IPR001912 Ribosomal protein S4/S9, N-terminal CDA09_19400 IPR022801 Ribosomal protein S4/S9 CDA09_19405 IPR019981 Ribosomal protein S11, bacterial-type CDA09_19405 IPR036967 Ribosomal protein S11 superfamily CDA09_19405 IPR018102 Ribosomal S11, conserved site CDA09_19405 IPR001971 Ribosomal protein S11 CDA09_19410 IPR027437 30s ribosomal protein S13, C-terminal CDA09_19410 IPR018269 Ribosomal protein S13, conserved site CDA09_19410 IPR001892 Ribosomal protein S13 CDA09_19410 IPR010979 Ribosomal protein S13-like, H2TH CDA09_19410 IPR019980 Ribosomal protein S13, bacterial-type CDA09_19415 IPR035977 Ribosomal protein L36 superfamily CDA09_19415 IPR000473 Ribosomal protein L36 CDA09_19420 IPR012340 Nucleic acid-binding, OB-fold CDA09_19420 IPR006196 RNA-binding domain, S1, IF1 type CDA09_19420 IPR004368 Translation initiation factor IF-1 CDA09_19420 IPR022967 RNA-binding domain, S1 CDA09_19425 IPR026593 Protein translocase subunit SecY CDA09_19425 IPR002208 SecY/SEC61-alpha family CDA09_19425 IPR030659 SecY conserved site CDA09_19425 IPR023201 SecY domain superfamily CDA09_19430 IPR030878 Ribosomal protein L15 CDA09_19430 IPR021131 Ribosomal protein L18e/L15P CDA09_19430 IPR005749 Ribosomal protein L15, bacterial-type CDA09_19430 IPR001196 Ribosomal protein L15, conserved site CDA09_19430 IPR036227 Ribosomal L18e/L15P superfamily CDA09_19435 IPR005996 Ribosomal protein L30, bacterial-type CDA09_19435 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CDA09_19435 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CDA09_19440 IPR005712 Ribosomal protein S5, bacterial-type CDA09_19440 IPR005324 Ribosomal protein S5, C-terminal CDA09_19440 IPR000851 Ribosomal protein S5 CDA09_19440 IPR018192 Ribosomal protein S5, N-terminal, conserved site CDA09_19440 IPR013810 Ribosomal protein S5, N-terminal CDA09_19440 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_19440 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_19445 IPR004389 Ribosomal protein L18, bacterial-type CDA09_19445 IPR005484 Ribosomal protein L18 CDA09_19450 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily CDA09_19450 IPR000702 Ribosomal protein L6 CDA09_19450 IPR002358 Ribosomal protein L6, conserved site CDA09_19450 IPR019906 Ribosomal protein L6, bacterial-type CDA09_19450 IPR020040 Ribosomal protein L6, alpha-beta domain CDA09_19455 IPR035987 Ribosomal protein S8 superfamily CDA09_19455 IPR000630 Ribosomal protein S8 CDA09_19460 IPR018271 Ribosomal protein S14, conserved site CDA09_19460 IPR001209 Ribosomal protein S14 CDA09_19460 IPR023036 Ribosomal protein S14, bacterial/plastid CDA09_19465 IPR002132 Ribosomal protein L5 CDA09_19465 IPR022803 Ribosomal protein L5 domain superfamily CDA09_19465 IPR020929 Ribosomal protein L5, conserved site CDA09_19465 IPR031309 Ribosomal protein L5, C-terminal CDA09_19465 IPR020930 Ribosomal protein L5, bacterial-type CDA09_19465 IPR031310 Ribosomal protein L5, N-terminal CDA09_19470 IPR005825 Ribosomal protein L24/L26, conserved site CDA09_19470 IPR003256 Ribosomal protein L24 CDA09_19470 IPR014722 Ribosomal protein L2, domain 2 CDA09_19470 IPR008991 Translation protein SH3-like domain superfamily CDA09_19470 IPR005824 KOW CDA09_19470 IPR041988 Ribosomal Protein L26/L24, KOW domain CDA09_19475 IPR036853 Ribosomal protein L14 superfamily CDA09_19475 IPR000218 Ribosomal protein L14P CDA09_19475 IPR005745 Ribosomal protein L14P, bacterial-type CDA09_19475 IPR019972 Ribosomal protein L14P, conserved site CDA09_19480 IPR019979 Ribosomal protein S17, conserved site CDA09_19480 IPR000266 Ribosomal protein S17/S11 CDA09_19480 IPR012340 Nucleic acid-binding, OB-fold CDA09_19480 IPR019984 30S ribosomal protein S17 CDA09_19485 IPR036049 Ribosomal protein L29/L35 superfamily CDA09_19485 IPR001854 Ribosomal protein L29/L35 CDA09_19485 IPR018254 Ribosomal protein L29, conserved site CDA09_19490 IPR020798 Ribosomal protein L16, conserved site CDA09_19490 IPR000114 Ribosomal protein L16 CDA09_19490 IPR036920 Ribosomal protein L10e/L16 superfamily CDA09_19490 IPR016180 Ribosomal protein L10e/L16 CDA09_19495 IPR001351 Ribosomal protein S3, C-terminal CDA09_19495 IPR036419 Ribosomal protein S3, C-terminal domain superfamily CDA09_19495 IPR005704 Ribosomal protein S3, bacterial-type CDA09_19495 IPR009019 K homology domain superfamily, prokaryotic type CDA09_19495 IPR004044 K Homology domain, type 2 CDA09_19495 IPR015946 K homology domain-like, alpha/beta CDA09_19495 IPR004087 K Homology domain CDA09_19495 IPR018280 Ribosomal protein S3, conserved site CDA09_19500 IPR001063 Ribosomal protein L22/L17 CDA09_19500 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CDA09_19500 IPR036394 Ribosomal protein L22/L17 superfamily CDA09_19500 IPR018260 Ribosomal protein L22/L17, conserved site CDA09_19505 IPR023575 Ribosomal protein S19, superfamily CDA09_19505 IPR005732 Ribosomal protein S19, bacterial-type CDA09_19505 IPR002222 Ribosomal protein S19/S15 CDA09_19505 IPR020934 Ribosomal protein S19 conserved site CDA09_19510 IPR022671 Ribosomal protein L2, conserved site CDA09_19510 IPR014726 Ribosomal protein L2, domain 3 CDA09_19510 IPR008991 Translation protein SH3-like domain superfamily CDA09_19510 IPR022669 Ribosomal protein L2, C-terminal CDA09_19510 IPR005880 Ribosomal protein L2, bacterial/organellar-type CDA09_19510 IPR002171 Ribosomal protein L2 CDA09_19510 IPR014722 Ribosomal protein L2, domain 2 CDA09_19510 IPR022666 Ribosomal Proteins L2, RNA binding domain CDA09_19510 IPR012340 Nucleic acid-binding, OB-fold CDA09_19515 IPR012678 Ribosomal protein L23/L15e core domain superfamily CDA09_19515 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CDA09_19515 IPR013025 Ribosomal protein L25/L23 CDA09_19520 IPR023574 Ribosomal protein L4 domain superfamily CDA09_19520 IPR013005 50S ribosomal protein uL4 CDA09_19520 IPR002136 Ribosomal protein L4/L1e CDA09_19525 IPR019927 Ribosomal protein L3, bacterial/organelle-type CDA09_19525 IPR000597 Ribosomal protein L3 CDA09_19525 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_19525 IPR019926 Ribosomal protein L3, conserved site CDA09_19530 IPR036838 Ribosomal protein S10 domain superfamily CDA09_19530 IPR027486 Ribosomal protein S10 domain CDA09_19530 IPR018268 Ribosomal protein S10, conserved site CDA09_19530 IPR001848 Ribosomal protein S10 CDA09_19535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19535 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CDA09_19535 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_19535 IPR000795 Transcription factor, GTP-binding domain CDA09_19535 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CDA09_19535 IPR004161 Translation elongation factor EFTu-like, domain 2 CDA09_19535 IPR031157 Tr-type G domain, conserved site CDA09_19535 IPR033720 Elongation factor Tu, domain 2 CDA09_19535 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CDA09_19535 IPR005225 Small GTP-binding protein domain CDA09_19535 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDA09_19540 IPR004161 Translation elongation factor EFTu-like, domain 2 CDA09_19540 IPR041095 Elongation Factor G, domain II CDA09_19540 IPR005517 Translation elongation factor EFG/EF2, domain IV CDA09_19540 IPR009022 Elongation factor G, domain III CDA09_19540 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_19540 IPR035647 EF-G domain III/V-like CDA09_19540 IPR004540 Translation elongation factor EFG/EF2 CDA09_19540 IPR000795 Transcription factor, GTP-binding domain CDA09_19540 IPR000640 Elongation factor EFG, domain V-like CDA09_19540 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_19540 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_19540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19540 IPR031157 Tr-type G domain, conserved site CDA09_19540 IPR035649 EFG, domain V CDA09_19540 IPR005225 Small GTP-binding protein domain CDA09_19545 IPR000235 Ribosomal protein S5/S7 CDA09_19545 IPR005717 Ribosomal protein S7, bacterial/organellar-type CDA09_19545 IPR020606 Ribosomal protein S7, conserved site CDA09_19545 IPR036823 Ribosomal protein S7 domain superfamily CDA09_19545 IPR023798 Ribosomal protein S7 domain CDA09_19550 IPR005679 Ribosomal protein S12, bacterial-type CDA09_19550 IPR006032 Ribosomal protein S12/S23 CDA09_19550 IPR012340 Nucleic acid-binding, OB-fold CDA09_19555 IPR042102 RNA polymerase Rpb1, domain 3 superfamily CDA09_19555 IPR007083 RNA polymerase Rpb1, domain 4 CDA09_19555 IPR007066 RNA polymerase Rpb1, domain 3 CDA09_19555 IPR007080 RNA polymerase Rpb1, domain 1 CDA09_19555 IPR007081 RNA polymerase Rpb1, domain 5 CDA09_19555 IPR038120 RNA polymerase Rpb1, funnel domain superfamily CDA09_19555 IPR006592 RNA polymerase, N-terminal CDA09_19555 IPR000722 RNA polymerase, alpha subunit CDA09_19555 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CDA09_19560 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain CDA09_19560 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily CDA09_19560 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type CDA09_19560 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CDA09_19560 IPR015712 DNA-directed RNA polymerase, subunit 2 CDA09_19560 IPR007642 RNA polymerase Rpb2, domain 2 CDA09_19560 IPR014724 RNA polymerase Rpb2, OB-fold CDA09_19560 IPR037034 RNA polymerase Rpb2, domain 2 superfamily CDA09_19560 IPR007645 RNA polymerase Rpb2, domain 3 CDA09_19560 IPR007121 RNA polymerase, beta subunit, conserved site CDA09_19560 IPR007644 RNA polymerase, beta subunit, protrusion CDA09_19560 IPR007641 RNA polymerase Rpb2, domain 7 CDA09_19565 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily CDA09_19565 IPR008932 Ribosomal protein L7/L12, oligomerisation CDA09_19565 IPR013823 Ribosomal protein L7/L12, C-terminal CDA09_19565 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDA09_19565 IPR000206 Ribosomal protein L7/L12 CDA09_19570 IPR001790 Ribosomal protein L10P CDA09_19570 IPR022973 Ribosomal protein L10 CDA09_19575 IPR023673 Ribosomal protein L1, conserved site CDA09_19575 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CDA09_19575 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CDA09_19575 IPR023674 Ribosomal protein L1-like CDA09_19575 IPR002143 Ribosomal protein L1 CDA09_19575 IPR005878 Ribosomal protein L1, bacterial-type CDA09_19580 IPR020783 Ribosomal protein L11, C-terminal CDA09_19580 IPR000911 Ribosomal protein L11/L12 CDA09_19580 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CDA09_19580 IPR020785 Ribosomal protein L11, conserved site CDA09_19580 IPR006519 Ribosomal protein L11, bacterial-type CDA09_19580 IPR020784 Ribosomal protein L11, N-terminal CDA09_19580 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CDA09_19585 IPR008991 Translation protein SH3-like domain superfamily CDA09_19585 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CDA09_19585 IPR005824 KOW CDA09_19585 IPR014722 Ribosomal protein L2, domain 2 CDA09_19585 IPR001062 Transcription antitermination protein, NusG CDA09_19585 IPR036735 NusG, N-terminal domain superfamily CDA09_19585 IPR006645 NusG, N-terminal CDA09_19590 IPR038379 SecE superfamily CDA09_19590 IPR005807 SecE subunit of protein translocation complex, bacterial-like CDA09_19590 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CDA09_19600 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CDA09_19600 IPR031157 Tr-type G domain, conserved site CDA09_19600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19600 IPR033720 Elongation factor Tu, domain 2 CDA09_19600 IPR004161 Translation elongation factor EFTu-like, domain 2 CDA09_19600 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_19600 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CDA09_19600 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CDA09_19600 IPR005225 Small GTP-binding protein domain CDA09_19600 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDA09_19600 IPR000795 Transcription factor, GTP-binding domain CDA09_19620 IPR016164 FAD-linked oxidase-like, C-terminal CDA09_19620 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDA09_19620 IPR006094 FAD linked oxidase, N-terminal CDA09_19620 IPR036318 FAD-binding, type PCMH-like superfamily CDA09_19620 IPR004113 FAD-linked oxidase, C-terminal CDA09_19620 IPR004490 Glycolate oxidase subunit GlcD CDA09_19620 IPR016166 FAD-binding domain, PCMH-type CDA09_19635 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_19635 IPR001789 Signal transduction response regulator, receiver domain CDA09_19635 IPR000792 Transcription regulator LuxR, C-terminal CDA09_19635 IPR011006 CheY-like superfamily CDA09_19645 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDA09_19645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19645 IPR038188 TorS, sensor domain superfamily CDA09_19645 IPR001789 Signal transduction response regulator, receiver domain CDA09_19645 IPR005467 Histidine kinase domain CDA09_19645 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_19645 IPR036641 HPT domain superfamily CDA09_19645 IPR037952 Sensor histidine kinase TorS, sensor domain CDA09_19645 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_19645 IPR003660 HAMP domain CDA09_19645 IPR011006 CheY-like superfamily CDA09_19645 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_19645 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19660 IPR003673 CoA-transferase family III CDA09_19660 IPR017659 Formyl-CoA:oxalate CoA-transferase CDA09_19660 IPR023606 CoA-transferase family III domain superfamily CDA09_19675 IPR007197 Radical SAM CDA09_19675 IPR034466 Methyltransferase, class B CDA09_19675 IPR006638 Elp3/MiaB/NifB CDA09_19675 IPR036724 Cobalamin-binding domain superfamily CDA09_19675 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_19675 IPR006158 Cobalamin (vitamin B12)-binding domain CDA09_19680 IPR022636 S-adenosylmethionine synthetase superfamily CDA09_19680 IPR002133 S-adenosylmethionine synthetase CDA09_19680 IPR022628 S-adenosylmethionine synthetase, N-terminal CDA09_19680 IPR022629 S-adenosylmethionine synthetase, central domain CDA09_19680 IPR022630 S-adenosylmethionine synthetase, C-terminal CDA09_19680 IPR022631 S-adenosylmethionine synthetase, conserved site CDA09_19690 IPR000845 Nucleoside phosphorylase domain CDA09_19690 IPR035994 Nucleoside phosphorylase superfamily CDA09_19690 IPR010049 MTA/SAH nucleosidase CDA09_19700 IPR035906 MetI-like superfamily CDA09_19700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_19705 IPR003439 ABC transporter-like CDA09_19705 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB CDA09_19705 IPR017871 ABC transporter, conserved site CDA09_19705 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19705 IPR003593 AAA+ ATPase domain CDA09_19715 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_19715 IPR017871 ABC transporter, conserved site CDA09_19715 IPR003593 AAA+ ATPase domain CDA09_19715 IPR003439 ABC transporter-like CDA09_19715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19725 IPR001851 ABC transporter, permease CDA09_19730 IPR001851 ABC transporter, permease CDA09_19735 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_19735 IPR017871 ABC transporter, conserved site CDA09_19735 IPR003439 ABC transporter-like CDA09_19735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19735 IPR003593 AAA+ ATPase domain CDA09_19740 IPR020845 AMP-binding, conserved site CDA09_19740 IPR000873 AMP-dependent synthetase/ligase CDA09_19740 IPR042099 AMP-dependent synthetase-like superfamily CDA09_19755 IPR010177 Doubled CXXCH motif CDA09_19755 IPR036280 Multiheme cytochrome superfamily CDA09_19755 IPR020015 Decaheme cytochrome, c-type, DmsE CDA09_19755 IPR011031 Multihaem cytochrome CDA09_19765 IPR000792 Transcription regulator LuxR, C-terminal CDA09_19765 IPR001789 Signal transduction response regulator, receiver domain CDA09_19765 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_19765 IPR011006 CheY-like superfamily CDA09_19770 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19770 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDA09_19770 IPR033480 Single Cache domain 2 CDA09_19770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19770 IPR017171 Signal transduction histidine kinase, MctS CDA09_19775 IPR032816 SNARE associated Golgi protein CDA09_19775 IPR032818 DedA family CDA09_19780 IPR001633 EAL domain CDA09_19780 IPR029787 Nucleotide cyclase CDA09_19780 IPR005330 MHYT domain CDA09_19780 IPR000160 GGDEF domain CDA09_19780 IPR035919 EAL domain superfamily CDA09_19785 IPR014362 Glutamate dehydrogenase CDA09_19785 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CDA09_19785 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CDA09_19785 IPR033524 Leu/Phe/Val dehydrogenases active site CDA09_19785 IPR036291 NAD(P)-binding domain superfamily CDA09_19785 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CDA09_19785 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CDA09_19790 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic CDA09_19790 IPR033669 Fused isobutyryl-CoA mutase CDA09_19790 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic CDA09_19790 IPR006159 Methylmalonyl-CoA mutase, C-terminal CDA09_19790 IPR006158 Cobalamin (vitamin B12)-binding domain CDA09_19790 IPR036724 Cobalamin-binding domain superfamily CDA09_19790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19790 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic CDA09_19795 IPR018060 DNA binding HTH domain, AraC-type CDA09_19795 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDA09_19795 IPR009057 Homeobox-like domain superfamily CDA09_19795 IPR020449 Transcription regulator HTH, AraC- type CDA09_19800 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19800 IPR011006 CheY-like superfamily CDA09_19800 IPR001789 Signal transduction response regulator, receiver domain CDA09_19800 IPR035965 PAS domain superfamily CDA09_19800 IPR000700 PAS-associated, C-terminal CDA09_19800 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_19800 IPR005467 Histidine kinase domain CDA09_19800 IPR000014 PAS domain CDA09_19800 IPR001610 PAC motif CDA09_19800 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_19800 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_19805 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_19805 IPR039420 Transcriptional regulatory protein WalR-like CDA09_19805 IPR001789 Signal transduction response regulator, receiver domain CDA09_19805 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_19805 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_19805 IPR011006 CheY-like superfamily CDA09_19830 IPR003855 Potassium transporter CDA09_19830 IPR023051 Potassium uptake protein, low affinity, Kup CDA09_19835 IPR011006 CheY-like superfamily CDA09_19835 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_19835 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_19835 IPR001789 Signal transduction response regulator, receiver domain CDA09_19835 IPR039420 Transcriptional regulatory protein WalR-like CDA09_19840 IPR029016 GAF-like domain superfamily CDA09_19840 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_19840 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal CDA09_19840 IPR003018 GAF domain CDA09_19840 IPR025201 Sensor protein KdpD, transmembrane domain CDA09_19840 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19840 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19840 IPR005467 Histidine kinase domain CDA09_19840 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_19840 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_19840 IPR038318 KdpD, transmembrane domain superfamily CDA09_19850 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CDA09_19860 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_19860 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_19860 IPR033480 Single Cache domain 2 CDA09_19860 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDA09_19860 IPR017171 Signal transduction histidine kinase, MctS CDA09_19865 IPR000792 Transcription regulator LuxR, C-terminal CDA09_19865 IPR001789 Signal transduction response regulator, receiver domain CDA09_19865 IPR011006 CheY-like superfamily CDA09_19865 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_19875 IPR036249 Thioredoxin-like superfamily CDA09_19875 IPR003782 Copper chaperone SCO1/SenC CDA09_19880 IPR011006 CheY-like superfamily CDA09_19880 IPR000792 Transcription regulator LuxR, C-terminal CDA09_19880 IPR001789 Signal transduction response regulator, receiver domain CDA09_19880 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_19885 IPR001478 PDZ domain CDA09_19885 IPR009003 Peptidase S1, PA clan CDA09_19885 IPR036034 PDZ superfamily CDA09_19885 IPR001940 Peptidase S1C CDA09_19905 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDA09_19905 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CDA09_19905 IPR011761 ATP-grasp fold CDA09_19905 IPR005481 Biotin carboxylase-like, N-terminal domain CDA09_19905 IPR011054 Rudiment single hybrid motif CDA09_19905 IPR011764 Biotin carboxylation domain CDA09_19905 IPR005482 Biotin carboxylase, C-terminal CDA09_19905 IPR016185 Pre-ATP-grasp domain superfamily CDA09_19910 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CDA09_19910 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CDA09_19910 IPR029045 ClpP/crotonase-like domain superfamily CDA09_19910 IPR034733 Acetyl-CoA carboxylase CDA09_19915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_19915 IPR003593 AAA+ ATPase domain CDA09_19915 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB CDA09_19920 IPR006158 Cobalamin (vitamin B12)-binding domain CDA09_19920 IPR036724 Cobalamin-binding domain superfamily CDA09_19920 IPR006159 Methylmalonyl-CoA mutase, C-terminal CDA09_19920 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic CDA09_19920 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic CDA09_19920 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic CDA09_19925 IPR011711 GntR, C-terminal CDA09_19925 IPR000485 AsnC-type HTH domain CDA09_19925 IPR036390 Winged helix DNA-binding domain superfamily CDA09_19925 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_19925 IPR000524 Transcription regulator HTH, GntR CDA09_19925 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_19930 IPR005677 Fumarate hydratase, class II CDA09_19930 IPR018951 Fumarase C, C-terminal CDA09_19930 IPR020557 Fumarate lyase, conserved site CDA09_19930 IPR008948 L-Aspartase-like CDA09_19930 IPR022761 Fumarate lyase, N-terminal CDA09_19930 IPR000362 Fumarate lyase family CDA09_19930 IPR024083 Fumarase/histidase, N-terminal CDA09_19945 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_19945 IPR000792 Transcription regulator LuxR, C-terminal CDA09_19945 IPR001789 Signal transduction response regulator, receiver domain CDA09_19945 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_19945 IPR011006 CheY-like superfamily CDA09_19955 IPR033580 Nurim-like CDA09_19990 IPR007055 BON domain CDA09_19990 IPR001775 GspD/PilQ family CDA09_19990 IPR032789 Pilus formation protein, N-terminal CDA09_19990 IPR004846 Type II/III secretion system CDA09_19990 IPR014004 Transport-associated and nodulation domain, bacteria CDA09_20020 IPR001482 Type II/IV secretion system protein CDA09_20020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20020 IPR022399 Helicase/secretion neighbourhood ATPase CDA09_20040 IPR014083 Cation/acetate symporter ActP CDA09_20040 IPR038377 Sodium/glucose symporter superfamily CDA09_20040 IPR018212 Sodium/solute symporter, conserved site CDA09_20040 IPR001734 Sodium/solute symporter CDA09_20045 IPR007436 Protein of unknown function DUF485 CDA09_20050 IPR029045 ClpP/crotonase-like domain superfamily CDA09_20050 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_20050 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_20050 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_20055 IPR029062 Class I glutamine amidotransferase-like CDA09_20055 IPR017929 CobB/CobQ glutamine amidotransferase CDA09_20055 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDA09_20055 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 CDA09_20055 IPR004459 Cobyric acid synthase CobQ CDA09_20055 IPR011698 CobB/CobQ-like glutamine amidotransferase CDA09_20055 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20060 IPR004485 Cobalamin biosynthesis CobD/CbiB CDA09_20065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDA09_20065 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CDA09_20065 IPR005860 L-threonine-O-3-phosphate decarboxylase CDA09_20065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDA09_20065 IPR015424 Pyridoxal phosphate-dependent transferase CDA09_20065 IPR004839 Aminotransferase, class I/classII CDA09_20070 IPR005911 Protein YhcC-like CDA09_20070 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_20070 IPR007197 Radical SAM CDA09_20070 IPR032432 Radical SAM, C-terminal extension CDA09_20070 IPR006638 Elp3/MiaB/NifB CDA09_20070 IPR039661 ELP3/YhcC CDA09_20075 IPR023544 ABC transporter, vitamin B12-binding protein CDA09_20075 IPR002491 ABC transporter periplasmic binding domain CDA09_20085 IPR028622 ATP-dependent RNA helicase RhlE CDA09_20085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20085 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDA09_20085 IPR014014 RNA helicase, DEAD-box type, Q motif CDA09_20085 IPR011545 DEAD/DEAH box helicase domain CDA09_20085 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_20085 IPR001650 Helicase, C-terminal CDA09_20095 IPR000878 Tetrapyrrole methylase CDA09_20095 IPR035996 Tetrapyrrole methylase superfamily CDA09_20095 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CDA09_20095 IPR014777 Tetrapyrrole methylase, subdomain 1 CDA09_20095 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase CDA09_20095 IPR014776 Tetrapyrrole methylase, subdomain 2 CDA09_20100 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX CDA09_20105 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily CDA09_20105 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC CDA09_20110 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD CDA09_20110 IPR036074 CbiD superfamily CDA09_20115 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit CDA09_20115 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase CDA09_20115 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase CDA09_20115 IPR000878 Tetrapyrrole methylase CDA09_20115 IPR014777 Tetrapyrrole methylase, subdomain 1 CDA09_20115 IPR035996 Tetrapyrrole methylase superfamily CDA09_20115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_20120 IPR000878 Tetrapyrrole methylase CDA09_20120 IPR035996 Tetrapyrrole methylase superfamily CDA09_20120 IPR014777 Tetrapyrrole methylase, subdomain 1 CDA09_20120 IPR006364 Precorrin-2 C(20)-methyltransferase domain CDA09_20120 IPR012382 Precorrin-2 C(20)-methyltransferase CDA09_20120 IPR014776 Tetrapyrrole methylase, subdomain 2 CDA09_20140 IPR006363 Precorrin-3B C17-methyltransferase domain CDA09_20140 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CDA09_20140 IPR014777 Tetrapyrrole methylase, subdomain 1 CDA09_20140 IPR035996 Tetrapyrrole methylase superfamily CDA09_20140 IPR000878 Tetrapyrrole methylase CDA09_20140 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CDA09_20140 IPR014776 Tetrapyrrole methylase, subdomain 2 CDA09_20145 IPR012910 TonB-dependent receptor, plug domain CDA09_20145 IPR037066 TonB-dependent receptor, plug domain superfamily CDA09_20145 IPR039423 TonB-dependent receptor-like CDA09_20145 IPR000531 TonB-dependent receptor-like, beta-barrel CDA09_20145 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDA09_20145 IPR010105 TonB-dependent siderophore receptor CDA09_20155 IPR037171 NagB/RpiA transferase-like CDA09_20155 IPR003702 Acetyl-CoA hydrolase/transferase CDA09_20155 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CDA09_20155 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CDA09_20160 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CDA09_20160 IPR017961 DNA polymerase, Y-family, little finger domain CDA09_20160 IPR022880 DNA polymerase IV CDA09_20160 IPR001126 UmuC domain CDA09_20165 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CDA09_20165 IPR022272 Lipocalin family conserved site CDA09_20165 IPR002433 Ornithine decarboxylase CDA09_20165 IPR029066 PLP-binding barrel CDA09_20165 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CDA09_20165 IPR000183 Ornithine/DAP/Arg decarboxylase CDA09_20165 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CDA09_20170 IPR022770 Ferric iron reductase FhuF domain CDA09_20170 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like CDA09_20170 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CDA09_20175 IPR036259 MFS transporter superfamily CDA09_20175 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CDA09_20175 IPR023692 Multidrug resistance protein MdtG CDA09_20175 IPR020846 Major facilitator superfamily domain CDA09_20175 IPR011701 Major facilitator superfamily CDA09_20195 IPR003702 Acetyl-CoA hydrolase/transferase CDA09_20195 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CDA09_20195 IPR017821 Succinate CoA transferase CDA09_20195 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CDA09_20195 IPR037171 NagB/RpiA transferase-like CDA09_20200 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_20200 IPR036390 Winged helix DNA-binding domain superfamily CDA09_20200 IPR005119 LysR, substrate-binding CDA09_20200 IPR000847 Transcription regulator HTH, LysR CDA09_20205 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_20205 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20205 IPR036291 NAD(P)-binding domain superfamily CDA09_20210 IPR001123 Amino acid exporter protein, LeuE-type CDA09_20225 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CDA09_20225 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily CDA09_20225 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDA09_20245 IPR016174 Di-haem cytochrome, transmembrane CDA09_20245 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CDA09_20250 IPR013766 Thioredoxin domain CDA09_20250 IPR017937 Thioredoxin, conserved site CDA09_20250 IPR036249 Thioredoxin-like superfamily CDA09_20250 IPR013740 Redoxin CDA09_20250 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CDA09_20255 IPR013766 Thioredoxin domain CDA09_20255 IPR008979 Galactose-binding-like domain superfamily CDA09_20255 IPR041017 DipZ, thioredoxin-like C-terminal domain CDA09_20255 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDA09_20255 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CDA09_20255 IPR036249 Thioredoxin-like superfamily CDA09_20260 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDA09_20260 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDA09_20260 IPR033879 Undecaprenyl-diphosphatase CDA09_20265 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDA09_20265 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDA09_20285 IPR001347 Sugar isomerase (SIS) CDA09_20285 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_20285 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CDA09_20285 IPR035490 GlmS/FrlB, SIS domain 2 CDA09_20285 IPR035466 GlmS/AgaS, SIS domain 1 CDA09_20285 IPR017932 Glutamine amidotransferase type 2 domain CDA09_20290 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_20290 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CDA09_20290 IPR001451 Hexapeptide repeat CDA09_20290 IPR038009 GlmU, C-terminal LbH domain CDA09_20290 IPR025877 MobA-like NTP transferase CDA09_20290 IPR011004 Trimeric LpxA-like superfamily CDA09_20295 IPR012147 Phosphate acetyl/butyryltransferase CDA09_20295 IPR002505 Phosphate acetyl/butaryl transferase CDA09_20300 IPR004372 Acetate/propionate kinase CDA09_20300 IPR000890 Aliphatic acid kinase, short-chain CDA09_20300 IPR023865 Aliphatic acid kinase, short-chain, conserved site CDA09_20305 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_20305 IPR023753 FAD/NAD(P)-binding domain CDA09_20305 IPR028261 Dihydroprymidine dehydrogenase domain II CDA09_20305 IPR009051 Alpha-helical ferredoxin CDA09_20305 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 CDA09_20310 IPR006982 Glutamate synthase, central-N CDA09_20310 IPR013785 Aldolase-type TIM barrel CDA09_20310 IPR017932 Glutamine amidotransferase type 2 domain CDA09_20310 IPR002489 Glutamate synthase, alpha subunit, C-terminal CDA09_20310 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily CDA09_20310 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_20310 IPR002932 Glutamate synthase domain CDA09_20315 IPR026875 Phosphohydrolase-associated domain CDA09_20315 IPR006261 dNTP triphosphohydrolase CDA09_20315 IPR023023 dNTP triphosphohydrolase, type 2 CDA09_20315 IPR006674 HD domain CDA09_20315 IPR003607 HD/PDEase domain CDA09_20320 IPR030963 3-dehydroquinate synthase family CDA09_20320 IPR030960 3-dehydroquinate synthase domain CDA09_20320 IPR016037 3-dehydroquinate synthase AroB CDA09_20325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20325 IPR031322 Shikimate kinase/gluconokinase CDA09_20325 IPR023000 Shikimate kinase, conserved site CDA09_20325 IPR000623 Shikimate kinase/Threonine synthase-like 1 CDA09_20355 IPR023346 Lysozyme-like domain superfamily CDA09_20355 IPR001264 Glycosyl transferase, family 51 CDA09_20355 IPR012338 Beta-lactamase/transpeptidase-like CDA09_20355 IPR001460 Penicillin-binding protein, transpeptidase CDA09_20355 IPR031376 Penicillin-binding protein, OB-like domain CDA09_20355 IPR036950 Penicillin binding protein transglycosylase domain CDA09_20360 IPR002908 Frataxin/CyaY CDA09_20360 IPR036524 Frataxin/CyaY superfamily CDA09_20370 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CDA09_20370 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CDA09_20370 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CDA09_20370 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CDA09_20370 IPR000183 Ornithine/DAP/Arg decarboxylase CDA09_20370 IPR029066 PLP-binding barrel CDA09_20370 IPR002986 Diaminopimelate decarboxylase, LysA CDA09_20380 IPR029903 RmlD-like substrate binding domain CDA09_20380 IPR036291 NAD(P)-binding domain superfamily CDA09_20380 IPR005913 dTDP-4-dehydrorhamnose reductase family CDA09_20385 IPR011051 RmlC-like cupin domain superfamily CDA09_20385 IPR014710 RmlC-like jelly roll fold CDA09_20385 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related CDA09_20390 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CDA09_20390 IPR005835 Nucleotidyl transferase domain CDA09_20390 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_20395 IPR016040 NAD(P)-binding domain CDA09_20395 IPR036291 NAD(P)-binding domain superfamily CDA09_20395 IPR005888 dTDP-glucose 4,6-dehydratase CDA09_20400 IPR012338 Beta-lactamase/transpeptidase-like CDA09_20400 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C CDA09_20410 IPR002830 UbiD decarboxylyase family CDA09_20410 IPR023677 UbiD decarboxylyase, bacteria CDA09_20415 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CDA09_20415 IPR001754 Orotidine 5'-phosphate decarboxylase domain CDA09_20415 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 CDA09_20415 IPR011060 Ribulose-phosphate binding barrel CDA09_20415 IPR013785 Aldolase-type TIM barrel CDA09_20425 IPR006370 4-hydroxybenzoate polyprenyltransferase-like CDA09_20425 IPR000537 UbiA prenyltransferase family CDA09_20425 IPR039653 Prenyltransferase CDA09_20425 IPR030470 UbiA prenyltransferase conserved site CDA09_20430 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDA09_20430 IPR007440 Chorismate--pyruvate lyase CDA09_20435 IPR001650 Helicase, C-terminal CDA09_20435 IPR033454 RecG, wedge domain CDA09_20435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20435 IPR012340 Nucleic acid-binding, OB-fold CDA09_20435 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_20435 IPR011545 DEAD/DEAH box helicase domain CDA09_20435 IPR004609 ATP-dependent DNA helicase RecG CDA09_20440 IPR035959 RutC-like superfamily CDA09_20440 IPR006056 RidA family CDA09_20440 IPR006175 YjgF/YER057c/UK114 family CDA09_20440 IPR019897 RidA, conserved site CDA09_20445 IPR003775 Flagellar assembly factor FliW CDA09_20445 IPR024046 Flagellar assembly factor FliW domain superfamily CDA09_20465 IPR011051 RmlC-like cupin domain superfamily CDA09_20465 IPR014710 RmlC-like jelly roll fold CDA09_20465 IPR003829 Pirin, N-terminal domain CDA09_20465 IPR008778 Pirin, C-terminal domain CDA09_20465 IPR012093 Pirin CDA09_20470 IPR000415 Nitroreductase-like CDA09_20470 IPR029479 Nitroreductase CDA09_20470 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE CDA09_20475 IPR029045 ClpP/crotonase-like domain superfamily CDA09_20475 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_20475 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_20475 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_20480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_20480 IPR005467 Histidine kinase domain CDA09_20480 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_20480 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_20480 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_20480 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_20480 IPR013727 Two-component sensor kinase, N-terminal CDA09_20485 IPR039420 Transcriptional regulatory protein WalR-like CDA09_20485 IPR001789 Signal transduction response regulator, receiver domain CDA09_20485 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_20485 IPR001867 OmpR/PhoB-type DNA-binding domain CDA09_20485 IPR011006 CheY-like superfamily CDA09_20485 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_20490 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_20490 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB CDA09_20490 IPR006143 RND efflux pump, membrane fusion protein CDA09_20495 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CDA09_20495 IPR001036 Acriflavin resistance protein CDA09_20495 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_20500 IPR003423 Outer membrane efflux protein CDA09_20500 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CDA09_20510 IPR002155 Thiolase CDA09_20510 IPR020616 Thiolase, N-terminal CDA09_20510 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_20510 IPR020617 Thiolase, C-terminal CDA09_20510 IPR020610 Thiolase, active site CDA09_20510 IPR020613 Thiolase, conserved site CDA09_20510 IPR016039 Thiolase-like CDA09_20515 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CDA09_20515 IPR029045 ClpP/crotonase-like domain superfamily CDA09_20515 IPR036291 NAD(P)-binding domain superfamily CDA09_20515 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDA09_20515 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDA09_20515 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_20515 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_20520 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDA09_20520 IPR042117 OMPP1/FadL/TodX superfamily CDA09_20525 IPR006683 Thioesterase domain CDA09_20525 IPR029069 HotDog domain superfamily CDA09_20525 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CDA09_20525 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CDA09_20530 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDA09_20530 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_20530 IPR029045 ClpP/crotonase-like domain superfamily CDA09_20530 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_20530 IPR036291 NAD(P)-binding domain superfamily CDA09_20530 IPR012802 Fatty oxidation complex, alpha subunit FadJ CDA09_20530 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDA09_20535 IPR020610 Thiolase, active site CDA09_20535 IPR020613 Thiolase, conserved site CDA09_20535 IPR012793 Beta-ketoadipyl CoA thiolase CDA09_20535 IPR020617 Thiolase, C-terminal CDA09_20535 IPR002155 Thiolase CDA09_20535 IPR016039 Thiolase-like CDA09_20535 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_20535 IPR020616 Thiolase, N-terminal CDA09_20540 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type CDA09_20540 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_20540 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_20540 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_20540 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_20540 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_20540 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_20545 IPR015292 Transcription regulator YbiH, C-terminal CDA09_20545 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_20545 IPR001647 DNA-binding HTH domain, TetR-type CDA09_20545 IPR009057 Homeobox-like domain superfamily CDA09_20545 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_20560 IPR011527 ABC transporter type 1, transmembrane domain CDA09_20560 IPR003593 AAA+ ATPase domain CDA09_20560 IPR003439 ABC transporter-like CDA09_20560 IPR036640 ABC transporter type 1, transmembrane domain superfamily CDA09_20560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20560 IPR017871 ABC transporter, conserved site CDA09_20570 IPR032091 Maltogenic Amylase, C-terminal CDA09_20570 IPR013780 Glycosyl hydrolase, all-beta CDA09_20570 IPR017853 Glycoside hydrolase superfamily CDA09_20570 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CDA09_20575 IPR003798 DNA recombination RmuC CDA09_20580 IPR036640 ABC transporter type 1, transmembrane domain superfamily CDA09_20580 IPR011527 ABC transporter type 1, transmembrane domain CDA09_20580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20580 IPR003593 AAA+ ATPase domain CDA09_20580 IPR017871 ABC transporter, conserved site CDA09_20580 IPR039421 Type I protein exporter CDA09_20580 IPR003439 ABC transporter-like CDA09_20585 IPR006036 Potassium uptake protein TrkA CDA09_20585 IPR038770 Sodium/solute symporter superfamily CDA09_20585 IPR036291 NAD(P)-binding domain superfamily CDA09_20585 IPR023941 Glutathione-regulated potassium-efflux system protein KefC CDA09_20585 IPR004771 K+/H+ exchanger CDA09_20585 IPR006153 Cation/H+ exchanger CDA09_20585 IPR003148 Regulator of K+ conductance, N-terminal CDA09_20590 IPR020827 Asparaginase/glutaminase, active site 1 CDA09_20590 IPR027475 Asparaginase/glutaminase, active site 2 CDA09_20590 IPR040919 Asparaginase/glutaminase, C-terminal CDA09_20590 IPR037152 L-asparaginase, N-terminal domain superfamily CDA09_20590 IPR036152 Asparaginase/glutaminase-like superfamily CDA09_20590 IPR027473 L-asparaginase, C-terminal CDA09_20590 IPR027474 L-asparaginase, N-terminal CDA09_20590 IPR006034 Asparaginase/glutaminase-like CDA09_20590 IPR004550 L-asparaginase, type II CDA09_20595 IPR000847 Transcription regulator HTH, LysR CDA09_20595 IPR005119 LysR, substrate-binding CDA09_20595 IPR036390 Winged helix DNA-binding domain superfamily CDA09_20595 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain CDA09_20595 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_20600 IPR002781 Transmembrane protein TauE-like CDA09_20615 IPR002500 Phosphoadenosine phosphosulphate reductase CDA09_20615 IPR011798 Adenosine 5'-phosphosulphate reductase CDA09_20615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_20615 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase CDA09_20620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_20620 IPR002500 Phosphoadenosine phosphosulphate reductase CDA09_20620 IPR011784 Sulphate adenylyltransferase, small subunit CDA09_20625 IPR000795 Transcription factor, GTP-binding domain CDA09_20625 IPR011779 Sulphate adenylyltransferase, large subunit CDA09_20625 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20625 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_20625 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDA09_20625 IPR031157 Tr-type G domain, conserved site CDA09_20625 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain CDA09_20625 IPR005225 Small GTP-binding protein domain CDA09_20640 IPR018080 Band 7/stomatin-like, conserved site CDA09_20640 IPR036013 Band 7/SPFH domain superfamily CDA09_20640 IPR032435 Band 7, C-terminal extension CDA09_20640 IPR001972 Stomatin family CDA09_20640 IPR001107 Band 7 domain CDA09_20645 IPR003959 ATPase, AAA-type, core CDA09_20645 IPR004491 Heat shock protein HslU CDA09_20645 IPR019489 Clp ATPase, C-terminal CDA09_20645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20645 IPR003593 AAA+ ATPase domain CDA09_20650 IPR029055 Nucleophile aminohydrolases, N-terminal CDA09_20650 IPR001353 Proteasome, subunit alpha/beta CDA09_20650 IPR022281 ATP-dependent protease, HslV subunit CDA09_20650 IPR023333 Proteasome B-type subunit CDA09_20660 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CDA09_20660 IPR029069 HotDog domain superfamily CDA09_20660 IPR006683 Thioesterase domain CDA09_20660 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CDA09_20660 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase CDA09_20665 IPR002898 MotA/TolQ/ExbB proton channel CDA09_20665 IPR014163 Tol-Pal system, TolQ CDA09_20670 IPR014168 Tol-Pal system protein TolR CDA09_20670 IPR003400 Biopolymer transport protein ExbD/TolR CDA09_20680 IPR014167 Tol-Pal system protein TolB CDA09_20680 IPR011042 Six-bladed beta-propeller, TolB-like CDA09_20680 IPR036752 TolB, N-terminal domain superfamily CDA09_20680 IPR011659 WD40-like Beta Propeller CDA09_20680 IPR007195 TolB, N-terminal CDA09_20685 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal CDA09_20685 IPR006665 OmpA-like domain CDA09_20685 IPR006664 Outer membrane protein, bacterial CDA09_20685 IPR036737 OmpA-like domain superfamily CDA09_20685 IPR006690 Outer membrane protein, OmpA-like, conserved site CDA09_20685 IPR039001 Peptidoglycan-associated lipoprotein CDA09_20695 IPR007197 Radical SAM CDA09_20695 IPR024924 7-carboxy-7-deazaguanine synthase-like CDA09_20695 IPR013785 Aldolase-type TIM barrel CDA09_20700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_20700 IPR018317 Queuosine biosynthesis protein QueC CDA09_20705 IPR000014 PAS domain CDA09_20705 IPR035965 PAS domain superfamily CDA09_20705 IPR013767 PAS fold CDA09_20705 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_20705 IPR005467 Histidine kinase domain CDA09_20705 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_20705 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_20705 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_20705 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_20710 IPR001789 Signal transduction response regulator, receiver domain CDA09_20710 IPR025944 Sigma-54 interaction domain, conserved site CDA09_20710 IPR003593 AAA+ ATPase domain CDA09_20710 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_20710 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDA09_20710 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDA09_20710 IPR002197 DNA binding HTH domain, Fis-type CDA09_20710 IPR009057 Homeobox-like domain superfamily CDA09_20710 IPR011006 CheY-like superfamily CDA09_20710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20780 IPR029787 Nucleotide cyclase CDA09_20780 IPR000014 PAS domain CDA09_20780 IPR005330 MHYT domain CDA09_20780 IPR035965 PAS domain superfamily CDA09_20780 IPR000160 GGDEF domain CDA09_20780 IPR035919 EAL domain superfamily CDA09_20780 IPR001633 EAL domain CDA09_20785 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_20785 IPR020845 AMP-binding, conserved site CDA09_20785 IPR042099 AMP-dependent synthetase-like superfamily CDA09_20785 IPR000873 AMP-dependent synthetase/ligase CDA09_20790 IPR017871 ABC transporter, conserved site CDA09_20790 IPR003439 ABC transporter-like CDA09_20790 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_20790 IPR003593 AAA+ ATPase domain CDA09_20790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20795 IPR017871 ABC transporter, conserved site CDA09_20795 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20795 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_20795 IPR003593 AAA+ ATPase domain CDA09_20795 IPR003439 ABC transporter-like CDA09_20805 IPR001851 ABC transporter, permease CDA09_20810 IPR001851 ABC transporter, permease CDA09_20815 IPR016188 PurM-like, N-terminal domain CDA09_20815 IPR010918 PurM-like, C-terminal domain CDA09_20815 IPR006283 Thiamine-monophosphate kinase CDA09_20815 IPR036921 PurM-like, N-terminal domain superfamily CDA09_20815 IPR036676 PurM-like, C-terminal domain superfamily CDA09_20820 IPR026037 Phosphatidylglycerophosphatase A CDA09_20820 IPR036681 PgpA-like superfamily CDA09_20820 IPR007686 YutG/PgpA domain CDA09_20825 IPR036653 CinA-like, C-terminal CDA09_20825 IPR008136 CinA, C-terminal CDA09_20830 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20830 IPR003593 AAA+ ATPase domain CDA09_20830 IPR013765 DNA recombination and repair protein RecA CDA09_20830 IPR020584 DNA recombination/repair protein RecA, conserved site CDA09_20830 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface CDA09_20830 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CDA09_20830 IPR023400 DNA recombination and repair protein RecA, C-terminal CDA09_20835 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_20835 IPR003783 Regulatory protein RecX CDA09_20840 IPR017871 ABC transporter, conserved site CDA09_20840 IPR003439 ABC transporter-like CDA09_20840 IPR003593 AAA+ ATPase domain CDA09_20840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_20840 IPR030921 LPS export ABC transporter, ATP-binding protein LptB CDA09_20840 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_20845 IPR000394 RNA polymerase sigma factor 54 CDA09_20845 IPR007046 RNA polymerase sigma factor 54, core-binding domain CDA09_20845 IPR007634 RNA polymerase sigma factor 54, DNA-binding CDA09_20845 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CDA09_20850 IPR036567 Ribosome hibernation promotion factor-like CDA09_20850 IPR003489 Ribosome hibernation promoting factor/RaiA CDA09_20855 IPR002178 PTS EIIA type-2 domain CDA09_20855 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN CDA09_20855 IPR016152 Phosphotransferase/anion transporter CDA09_20860 IPR003755 HPr(Ser) kinase/phosphorylase CDA09_20860 IPR011104 HPr kinase/phosphorylase, C-terminal CDA09_20860 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal CDA09_20860 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CDA09_20865 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_20865 IPR005787 Threonine dehydratase, biosynthetic CDA09_20865 IPR038110 Threonine dehydratase, ACT-like domain superfamily CDA09_20865 IPR001721 Threonine dehydratase, ACT-like domain CDA09_20865 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CDA09_20865 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_20870 IPR037171 NagB/RpiA transferase-like CDA09_20870 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CDA09_20870 IPR002698 5-formyltetrahydrofolate cyclo-ligase CDA09_20875 IPR012289 Lytic transglycosylase, superhelical linker CDA09_20875 IPR008258 Transglycosylase SLT domain 1 CDA09_20875 IPR023346 Lysozyme-like domain superfamily CDA09_20875 IPR000189 Prokaryotic transglycosylase, active site CDA09_20875 IPR008939 Lytic transglycosylase, superhelical U-shaped CDA09_20875 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily CDA09_20880 IPR036291 NAD(P)-binding domain superfamily CDA09_20880 IPR001509 NAD-dependent epimerase/dehydratase CDA09_20890 IPR003607 HD/PDEase domain CDA09_20890 IPR012006 tRNA nucleotidyltransferase, proteobacteria CDA09_20890 IPR006674 HD domain CDA09_20890 IPR002646 Poly A polymerase, head domain CDA09_20890 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CDA09_20900 IPR029058 Alpha/Beta hydrolase fold CDA09_20900 IPR000639 Epoxide hydrolase-like CDA09_20900 IPR000073 Alpha/beta hydrolase fold-1 CDA09_20915 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_20915 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_20915 IPR036291 NAD(P)-binding domain superfamily CDA09_20915 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_20920 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CDA09_20920 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase CDA09_20920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDA09_20930 IPR032816 SNARE associated Golgi protein CDA09_20935 IPR035709 RutC family, YoaB-like CDA09_20935 IPR019897 RidA, conserved site CDA09_20935 IPR006175 YjgF/YER057c/UK114 family CDA09_20935 IPR035959 RutC-like superfamily CDA09_20945 IPR026591 Sirtuin, catalytic core small domain superfamily CDA09_20945 IPR026590 Sirtuin family, catalytic core domain CDA09_20945 IPR003000 Sirtuin family CDA09_20945 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDA09_20950 IPR006657 Molybdopterin dinucleotide-binding domain CDA09_20950 IPR037920 Probable oxidoreductase YoaE, C-terminal CDA09_20950 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CDA09_20950 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDA09_20950 IPR006656 Molybdopterin oxidoreductase CDA09_20950 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_20960 IPR000836 Phosphoribosyltransferase domain CDA09_20960 IPR029057 Phosphoribosyltransferase-like CDA09_20960 IPR023031 Orotate phosphoribosyltransferase CDA09_20960 IPR004467 Orotate phosphoribosyl transferase domain CDA09_20965 IPR020848 AP endonuclease 1, conserved site CDA09_20965 IPR020847 AP endonuclease 1, binding site CDA09_20965 IPR004808 AP endonuclease 1 CDA09_20965 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDA09_20965 IPR005135 Endonuclease/exonuclease/phosphatase CDA09_20995 IPR001633 EAL domain CDA09_20995 IPR035919 EAL domain superfamily CDA09_20995 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CDA09_21010 IPR036188 FAD/NAD(P)-binding domain superfamily CDA09_21010 IPR002938 FAD-binding domain CDA09_21010 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase CDA09_21025 IPR011545 DEAD/DEAH box helicase domain CDA09_21025 IPR038257 CRISPR-associated Cas3-type HD domain superfamily CDA09_21025 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_21025 IPR001650 Helicase, C-terminal CDA09_21025 IPR035011 CRISPR-associated endonuclease/helicase Cas3 CDA09_21025 IPR006474 Helicase Cas3, CRISPR-associated, core CDA09_21025 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21025 IPR006483 CRISPR-associated Cas3-type HD domain CDA09_21030 IPR013381 CRISPR-associated protein Cse1 CDA09_21035 IPR013382 CRISPR-associated protein Cse2 CDA09_21035 IPR038287 Cse2 superfamily CDA09_21040 IPR010148 CRISPR-associated protein, CT1975 CDA09_21045 IPR021124 CRISPR-associated protein, Cas5 CDA09_21045 IPR010147 CRISPR-associated protein, CasD CDA09_21045 IPR013422 CRISPR-associated protein Cas5, N-terminal CDA09_21065 IPR002729 CRISPR-associated protein Cas1 CDA09_21065 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain CDA09_21065 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain CDA09_21065 IPR033641 CRISPR-associated protein Cas1, type I-E CDA09_21065 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype CDA09_21070 IPR010152 CRISPR-associated protein Cas2 subtype CDA09_21085 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily CDA09_21085 IPR006094 FAD linked oxidase, N-terminal CDA09_21085 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CDA09_21085 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CDA09_21085 IPR016169 FAD-binding, type PCMH, subdomain 2 CDA09_21085 IPR016167 FAD-binding, type PCMH, subdomain 1 CDA09_21085 IPR036318 FAD-binding, type PCMH-like superfamily CDA09_21085 IPR016166 FAD-binding domain, PCMH-type CDA09_21105 IPR009000 Translation protein, beta-barrel domain superfamily CDA09_21105 IPR031157 Tr-type G domain, conserved site CDA09_21105 IPR004161 Translation elongation factor EFTu-like, domain 2 CDA09_21105 IPR035647 EF-G domain III/V-like CDA09_21105 IPR000795 Transcription factor, GTP-binding domain CDA09_21105 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21105 IPR004548 Peptide chain release factor 3 CDA09_21105 IPR032090 Peptide chain release factor 3, C-terminal CDA09_21105 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CDA09_21105 IPR041732 Peptide chain release factor 3, GTP-binding domain CDA09_21105 IPR005225 Small GTP-binding protein domain CDA09_21115 IPR005496 Integral membrane protein TerC CDA09_21135 IPR008302 Uncharacterised conserved protein UCP016719 CDA09_21145 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CDA09_21145 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CDA09_21145 IPR000836 Phosphoribosyltransferase domain CDA09_21145 IPR005946 Ribose-phosphate pyrophosphokinase CDA09_21145 IPR029057 Phosphoribosyltransferase-like CDA09_21160 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CDA09_21160 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily CDA09_21160 IPR011822 Cobalamin-dependent methionine synthase CDA09_21160 IPR036594 Methionine synthase domain CDA09_21160 IPR003726 Homocysteine-binding domain CDA09_21160 IPR000489 Pterin-binding domain CDA09_21160 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CDA09_21160 IPR033706 Methionine synthase, B12-binding domain CDA09_21160 IPR036589 Homocysteine-binding domain superfamily CDA09_21160 IPR011005 Dihydropteroate synthase-like CDA09_21160 IPR036724 Cobalamin-binding domain superfamily CDA09_21160 IPR006158 Cobalamin (vitamin B12)-binding domain CDA09_21165 IPR029058 Alpha/Beta hydrolase fold CDA09_21165 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase CDA09_21165 IPR000073 Alpha/beta hydrolase fold-1 CDA09_21180 IPR028081 Leucine-binding protein domain CDA09_21180 IPR000709 Leu/Ile/Val-binding protein CDA09_21180 IPR028082 Periplasmic binding protein-like I CDA09_21185 IPR028082 Periplasmic binding protein-like I CDA09_21185 IPR000709 Leu/Ile/Val-binding protein CDA09_21185 IPR028081 Leucine-binding protein domain CDA09_21190 IPR001851 ABC transporter, permease CDA09_21195 IPR001851 ABC transporter, permease CDA09_21195 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CDA09_21200 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21200 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_21200 IPR017871 ABC transporter, conserved site CDA09_21200 IPR003439 ABC transporter-like CDA09_21200 IPR003593 AAA+ ATPase domain CDA09_21205 IPR003593 AAA+ ATPase domain CDA09_21205 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_21205 IPR003439 ABC transporter-like CDA09_21205 IPR017871 ABC transporter, conserved site CDA09_21205 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21215 IPR036259 MFS transporter superfamily CDA09_21215 IPR020846 Major facilitator superfamily domain CDA09_21215 IPR011701 Major facilitator superfamily CDA09_21215 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CDA09_21220 IPR001208 MCM domain CDA09_21220 IPR004482 Mg chelatase-related protein CDA09_21220 IPR025158 Mg chelatase-related protein, C-terminal domain CDA09_21220 IPR000523 Magnesium chelatase ChlI domain CDA09_21220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21220 IPR003593 AAA+ ATPase domain CDA09_21220 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_21220 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_21235 IPR002187 Nitrogen regulatory protein PII CDA09_21235 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDA09_21235 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDA09_21235 IPR017918 Nitrogen regulatory protein PII, conserved site CDA09_21240 IPR018047 Ammonium transporter, conserved site CDA09_21240 IPR001905 Ammonium transporter CDA09_21240 IPR024041 Ammonium transporter AmtB-like domain CDA09_21240 IPR029020 Ammonium/urea transporter CDA09_21245 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CDA09_21245 IPR004810 Formyltetrahydrofolate deformylase CDA09_21245 IPR036477 Formyl transferase, N-terminal domain superfamily CDA09_21245 IPR002912 ACT domain CDA09_21245 IPR002376 Formyl transferase, N-terminal CDA09_21250 IPR023214 HAD superfamily CDA09_21250 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein CDA09_21250 IPR036412 HAD-like superfamily CDA09_21255 IPR002912 ACT domain CDA09_21255 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDA09_21255 IPR005789 Threonine dehydratase, catabolic CDA09_21255 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CDA09_21255 IPR001926 Pyridoxal-phosphate dependent enzyme CDA09_21260 IPR003439 ABC transporter-like CDA09_21260 IPR032781 ABC-transporter extension domain CDA09_21260 IPR003593 AAA+ ATPase domain CDA09_21260 IPR017871 ABC transporter, conserved site CDA09_21260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21275 IPR024932 Flavin transferase ApbE CDA09_21275 IPR003374 ApbE-like superfamily CDA09_21275 IPR042159 Flavin-trafficking protein ApbE CDA09_21280 IPR016185 Pre-ATP-grasp domain superfamily CDA09_21280 IPR004215 Prokaryotic glutathione synthetase, N-terminal CDA09_21280 IPR004218 Prokaryotic glutathione synthetase, ATP-binding CDA09_21280 IPR006284 Glutathione synthetase, prokaryotic CDA09_21280 IPR013815 ATP-grasp fold, subdomain 1 CDA09_21280 IPR011761 ATP-grasp fold CDA09_21290 IPR025931 TaqI-like C-terminal specificity domain CDA09_21290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_21290 IPR011639 Restriction modification methylase Eco57I CDA09_21290 IPR023135 N6 adenine-specific DNA methyltransferase, TaqI class, C-terminal CDA09_21290 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDA09_21290 IPR021188 N6 adenine-specific DNA methyltransferase, TaqI class CDA09_21310 IPR013551 Domain of unknown function DUF1732 CDA09_21310 IPR013527 YicC-like, N-terminal CDA09_21310 IPR005229 Conserved hypothetical protein CHP00255 CDA09_21315 IPR008271 Serine/threonine-protein kinase, active site CDA09_21315 IPR000719 Protein kinase domain CDA09_21315 IPR005543 PASTA domain CDA09_21315 IPR011009 Protein kinase-like domain superfamily CDA09_21320 IPR015655 Protein phosphatase 2C family CDA09_21320 IPR036457 PPM-type phosphatase domain superfamily CDA09_21320 IPR001932 PPM-type phosphatase domain CDA09_21325 IPR018336 Ribonuclease PH, conserved site CDA09_21325 IPR002381 Ribonuclease PH, bacterial-type CDA09_21325 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_21325 IPR027408 PNPase/RNase PH domain superfamily CDA09_21325 IPR001247 Exoribonuclease, phosphorolytic domain 1 CDA09_21325 IPR015847 Exoribonuclease, phosphorolytic domain 2 CDA09_21325 IPR036345 Exoribonuclease, PH domain 2 superfamily CDA09_21330 IPR020922 dITP/XTP pyrophosphatase CDA09_21330 IPR002637 Ham1-like protein CDA09_21330 IPR029001 Inosine triphosphate pyrophosphatase-like CDA09_21335 IPR006638 Elp3/MiaB/NifB CDA09_21335 IPR010723 HemN, C-terminal CDA09_21335 IPR023404 Radical SAM, alpha/beta horseshoe CDA09_21335 IPR004559 Heme chaperone HemW-like CDA09_21335 IPR007197 Radical SAM CDA09_21335 IPR034505 Anaerobic coproporphyrinogen-III oxidase CDA09_21340 IPR004634 Peptidase S49, protease IV CDA09_21340 IPR029045 ClpP/crotonase-like domain superfamily CDA09_21340 IPR004635 Peptidase S49, SppA CDA09_21340 IPR002142 Peptidase S49 CDA09_21340 IPR033854 Signal peptide peptidase A CDA09_21345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_21345 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CDA09_21350 IPR033983 Thiazole synthase ThiG CDA09_21350 IPR008867 Thiazole synthase CDA09_21350 IPR013785 Aldolase-type TIM barrel CDA09_21355 IPR008867 Thiazole synthase CDA09_21355 IPR033983 Thiazole synthase ThiG CDA09_21355 IPR012675 Beta-grasp domain superfamily CDA09_21355 IPR013785 Aldolase-type TIM barrel CDA09_21355 IPR003749 Sulfur carrier ThiS/MoaD-like CDA09_21355 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDA09_21355 IPR010035 ThiS, thiamine-biosynthesis CDA09_21365 IPR038488 Integrase, DNA-binding domain superfamily CDA09_21365 IPR002104 Integrase, catalytic domain CDA09_21365 IPR025166 Integrase, DNA-binding domain CDA09_21365 IPR010998 Integrase/recombinase, N-terminal CDA09_21365 IPR013762 Integrase-like, catalytic domain superfamily CDA09_21365 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDA09_21375 IPR001387 Cro/C1-type helix-turn-helix domain CDA09_21375 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CDA09_21380 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_21380 IPR000847 Transcription regulator HTH, LysR CDA09_21380 IPR005119 LysR, substrate-binding CDA09_21380 IPR036390 Winged helix DNA-binding domain superfamily CDA09_21400 IPR008878 Transposase IS66, Orf2 CDA09_21405 IPR039552 Transposase IS66, C-terminal CDA09_21405 IPR024474 Zinc-finger binding domain of transposase IS66 CDA09_21405 IPR024463 Transposase TnpC, homeodomain CDA09_21405 IPR004291 Transposase, IS66 CDA09_21410 IPR012912 Plasmid pRiA4b, Orf3 CDA09_21410 IPR024047 MM3350-like superfamily CDA09_21415 IPR000639 Epoxide hydrolase-like CDA09_21415 IPR000073 Alpha/beta hydrolase fold-1 CDA09_21415 IPR029058 Alpha/Beta hydrolase fold CDA09_21430 IPR013785 Aldolase-type TIM barrel CDA09_21430 IPR012425 DmpG-like communication CDA09_21430 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain CDA09_21430 IPR000891 Pyruvate carboxyltransferase CDA09_21430 IPR017629 4-hydroxy-2-oxovalerate aldolase CDA09_21435 IPR000534 Semialdehyde dehydrogenase, NAD-binding CDA09_21435 IPR036291 NAD(P)-binding domain superfamily CDA09_21435 IPR015426 Acetaldehyde dehydrogenase, C-terminal CDA09_21435 IPR003361 Acetaldehyde dehydrogenase CDA09_21440 IPR011234 Fumarylacetoacetase-like, C-terminal CDA09_21440 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CDA09_21445 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDA09_21445 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II CDA09_21445 IPR017626 2,3-dihydroxybiphenyl 1,2-dioxygenase CDA09_21445 IPR037523 Vicinal oxygen chelate (VOC) domain CDA09_21445 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDA09_21450 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21450 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_21450 IPR036291 NAD(P)-binding domain superfamily CDA09_21450 IPR017711 Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase CDA09_21460 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CDA09_21460 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDA09_21465 IPR009310 BphX-like CDA09_21470 IPR000391 Ring-hydroxylating dioxygenase beta subunit CDA09_21470 IPR032710 NTF2-like domain superfamily CDA09_21475 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDA09_21475 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CDA09_21475 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CDA09_21475 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CDA09_21475 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CDA09_21480 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_21480 IPR000524 Transcription regulator HTH, GntR CDA09_21480 IPR036390 Winged helix DNA-binding domain superfamily CDA09_21480 IPR011711 GntR, C-terminal CDA09_21480 IPR008920 Transcription regulator FadR/GntR, C-terminal CDA09_21505 IPR036390 Winged helix DNA-binding domain superfamily CDA09_21505 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_21505 IPR002577 Helix-turn-helix, HxlR type CDA09_21525 IPR013785 Aldolase-type TIM barrel CDA09_21525 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDA09_21530 IPR000412 ABC-2 transporter CDA09_21535 IPR003439 ABC transporter-like CDA09_21535 IPR017871 ABC transporter, conserved site CDA09_21535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21535 IPR003593 AAA+ ATPase domain CDA09_21535 IPR000412 ABC-2 transporter CDA09_21540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21540 IPR017871 ABC transporter, conserved site CDA09_21540 IPR003593 AAA+ ATPase domain CDA09_21540 IPR000412 ABC-2 transporter CDA09_21540 IPR003439 ABC transporter-like CDA09_21545 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDA09_21555 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDA09_21555 IPR001036 Acriflavin resistance protein CDA09_21560 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_21560 IPR006143 RND efflux pump, membrane fusion protein CDA09_21565 IPR004276 Glycosyltransferase family 28, N-terminal domain CDA09_21565 IPR006009 N-acetylglucosaminyltransferase, MurG CDA09_21565 IPR007235 Glycosyl transferase, family 28, C-terminal CDA09_21575 IPR002641 Patatin-like phospholipase domain CDA09_21575 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDA09_21575 IPR001423 Lysophospholipase patatin, conserved site CDA09_21580 IPR011009 Protein kinase-like domain superfamily CDA09_21580 IPR010232 Probable protein kinase UbiB CDA09_21580 IPR004147 UbiB domain CDA09_21620 IPR021679 Toxin endonuclease, YhaV CDA09_21655 IPR037518 MPN domain CDA09_21655 IPR025657 RadC-like JAB domain CDA09_21655 IPR010994 RuvA domain 2-like CDA09_21655 IPR001405 Uncharacterised protein family UPF0758 CDA09_21655 IPR020891 Uncharacterised protein family UPF0758, conserved site CDA09_21720 IPR020846 Major facilitator superfamily domain CDA09_21720 IPR036259 MFS transporter superfamily CDA09_21720 IPR004734 Multidrug resistance protein CDA09_21720 IPR011701 Major facilitator superfamily CDA09_21720 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CDA09_21730 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_21730 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_21730 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_21730 IPR029045 ClpP/crotonase-like domain superfamily CDA09_21740 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_21740 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_21740 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_21740 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_21740 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_21740 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_21745 IPR037171 NagB/RpiA transferase-like CDA09_21745 IPR003702 Acetyl-CoA hydrolase/transferase CDA09_21745 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CDA09_21745 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CDA09_21750 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_21750 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_21750 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_21750 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_21750 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_21750 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_21750 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_21755 IPR029061 Thiamin diphosphate-binding fold CDA09_21755 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDA09_21760 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CDA09_21760 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CDA09_21760 IPR029061 Thiamin diphosphate-binding fold CDA09_21760 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CDA09_21760 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CDA09_21760 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit CDA09_21760 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CDA09_21765 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_21765 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_21775 IPR029045 ClpP/crotonase-like domain superfamily CDA09_21775 IPR017602 Cyclohexa-1,5-dienecarbonyl-CoA hydratase CDA09_21775 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_21780 IPR029045 ClpP/crotonase-like domain superfamily CDA09_21780 IPR017613 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase CDA09_21780 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_21785 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDA09_21785 IPR011032 GroES-like superfamily CDA09_21785 IPR017614 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase CDA09_21785 IPR013149 Alcohol dehydrogenase, C-terminal CDA09_21785 IPR036291 NAD(P)-binding domain superfamily CDA09_21785 IPR013154 Alcohol dehydrogenase, N-terminal CDA09_21790 IPR036291 NAD(P)-binding domain superfamily CDA09_21790 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_21790 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CDA09_21790 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDA09_21790 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CDA09_21790 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDA09_21790 IPR022694 3-hydroxyacyl-CoA dehydrogenase CDA09_21795 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_21795 IPR029045 ClpP/crotonase-like domain superfamily CDA09_21795 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_21795 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_21800 IPR002155 Thiolase CDA09_21800 IPR020617 Thiolase, C-terminal CDA09_21800 IPR020613 Thiolase, conserved site CDA09_21800 IPR020616 Thiolase, N-terminal CDA09_21800 IPR016039 Thiolase-like CDA09_21800 IPR020610 Thiolase, active site CDA09_21800 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_21810 IPR008275 CoA enzyme activase CDA09_21810 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CDA09_21815 IPR008275 CoA enzyme activase CDA09_21815 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CDA09_21825 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_21830 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_21840 IPR001851 ABC transporter, permease CDA09_21850 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_21850 IPR003439 ABC transporter-like CDA09_21850 IPR017871 ABC transporter, conserved site CDA09_21850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21850 IPR003593 AAA+ ATPase domain CDA09_21855 IPR003593 AAA+ ATPase domain CDA09_21855 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_21855 IPR003439 ABC transporter-like CDA09_21855 IPR017871 ABC transporter, conserved site CDA09_21855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21860 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_21860 IPR000873 AMP-dependent synthetase/ligase CDA09_21860 IPR011957 Benzoate-CoA ligase family CDA09_21865 IPR001647 DNA-binding HTH domain, TetR-type CDA09_21865 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_21865 IPR009057 Homeobox-like domain superfamily CDA09_21870 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_21870 IPR011006 CheY-like superfamily CDA09_21870 IPR001789 Signal transduction response regulator, receiver domain CDA09_21870 IPR000792 Transcription regulator LuxR, C-terminal CDA09_21870 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_21875 IPR005467 Histidine kinase domain CDA09_21875 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_21875 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_21875 IPR001610 PAC motif CDA09_21875 IPR000014 PAS domain CDA09_21875 IPR000700 PAS-associated, C-terminal CDA09_21875 IPR035965 PAS domain superfamily CDA09_21875 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_21880 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_21880 IPR007197 Radical SAM CDA09_21880 IPR001989 Radical-activating enzyme, conserved site CDA09_21880 IPR012839 Organic radical enzyme activase CDA09_21880 IPR034457 Organic radical-activating enzymes CDA09_21880 IPR023880 Benzylsuccinate synthase activating enzyme CDA09_21880 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_21880 IPR013785 Aldolase-type TIM barrel CDA09_21880 IPR034462 Benzylsuccinate synthase activase CDA09_21885 IPR013161 Benzylsuccinate synthase gamma subunit CDA09_21885 IPR038640 Benzylsuccinate synthase gamma subunit superfamily CDA09_21890 IPR004184 Pyruvate formate lyase domain CDA09_21890 IPR001150 Glycine radical domain CDA09_21895 IPR040565 Benzylsuccinate synthase beta subunit CDA09_21900 IPR011704 ATPase, dynein-related, AAA domain CDA09_21900 IPR013615 CbbQ/NirQ/NorQ, C-terminal CDA09_21900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_21940 IPR033932 YtcJ like CDA09_21940 IPR013108 Amidohydrolase 3 CDA09_21940 IPR011059 Metal-dependent hydrolase, composite domain superfamily CDA09_21940 IPR032466 Metal-dependent hydrolase CDA09_21945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_21945 IPR035965 PAS domain superfamily CDA09_21945 IPR000014 PAS domain CDA09_21945 IPR000700 PAS-associated, C-terminal CDA09_21945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_21945 IPR001789 Signal transduction response regulator, receiver domain CDA09_21945 IPR001610 PAC motif CDA09_21945 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_21945 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_21945 IPR005467 Histidine kinase domain CDA09_21945 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_21945 IPR011006 CheY-like superfamily CDA09_21945 IPR013656 PAS fold-4 CDA09_21950 IPR036610 PEBP-like superfamily CDA09_21950 IPR008914 Phosphatidylethanolamine-binding protein CDA09_21950 IPR005247 YbhB/YbcL CDA09_21955 IPR029045 ClpP/crotonase-like domain superfamily CDA09_21955 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_21955 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_21955 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_21960 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_21960 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_21960 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_21960 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_21960 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_21960 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_21970 IPR023606 CoA-transferase family III domain superfamily CDA09_21970 IPR003673 CoA-transferase family III CDA09_21975 IPR003673 CoA-transferase family III CDA09_21975 IPR023606 CoA-transferase family III domain superfamily CDA09_21980 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21980 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_21980 IPR036291 NAD(P)-binding domain superfamily CDA09_21980 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_21985 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_21985 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_21985 IPR036291 NAD(P)-binding domain superfamily CDA09_21985 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_22075 IPR000119 Histone-like DNA-binding protein CDA09_22075 IPR005685 Integration host factor, beta subunit CDA09_22075 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CDA09_22105 IPR035985 Ubiquitin-activating enzyme CDA09_22105 IPR000594 THIF-type NAD/FAD binding fold CDA09_22105 IPR032701 Prokaryotic E2 family B CDA09_22115 IPR026325 Protein of unknown function DUF932 CDA09_22130 IPR027444 Histone-like protein H-NS, C-terminal domain CDA09_22130 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily CDA09_22130 IPR001801 Histone-like protein H-NS CDA09_22155 IPR023405 DNA topoisomerase, type IA, core domain CDA09_22155 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CDA09_22155 IPR013497 DNA topoisomerase, type IA, central CDA09_22155 IPR005738 DNA topoisomerase III CDA09_22155 IPR023406 DNA topoisomerase, type IA, active site CDA09_22155 IPR003601 DNA topoisomerase, type IA, domain 2 CDA09_22155 IPR000380 DNA topoisomerase, type IA CDA09_22155 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CDA09_22155 IPR006171 TOPRIM domain CDA09_22155 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CDA09_22155 IPR034144 DNA topoisomerase 3-like, TOPRIM domain CDA09_22155 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CDA09_22200 IPR025669 AAA domain CDA09_22200 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22220 IPR001424 Superoxide dismutase, copper/zinc binding domain CDA09_22220 IPR018152 Superoxide dismutase, copper/zinc, binding site CDA09_22220 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone CDA09_22220 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily CDA09_22225 IPR036390 Winged helix DNA-binding domain superfamily CDA09_22225 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_22225 IPR012349 FMN-binding split barrel CDA09_22225 IPR002563 Flavin reductase like domain CDA09_22230 IPR015797 NUDIX hydrolase-like domain superfamily CDA09_22230 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CDA09_22230 IPR000445 Helix-hairpin-helix motif CDA09_22230 IPR029119 MutY, C-terminal CDA09_22230 IPR004035 Endonuclease III, iron-sulphur binding site CDA09_22230 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CDA09_22230 IPR004036 Endonuclease III-like, conserved site-2 CDA09_22230 IPR011257 DNA glycosylase CDA09_22230 IPR005760 A/G-specific adenine glycosylase MutY CDA09_22230 IPR003265 HhH-GPD domain CDA09_22240 IPR004507 Flavin prenyltransferase UbiX-like CDA09_22240 IPR003382 Flavoprotein CDA09_22240 IPR036551 Flavin prenyltransferase-like CDA09_22250 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CDA09_22250 IPR001851 ABC transporter, permease CDA09_22255 IPR001851 ABC transporter, permease CDA09_22260 IPR005115 Uncharacterised domain UPF0126 CDA09_22265 IPR001185 Large-conductance mechanosensitive channel CDA09_22265 IPR019823 Large-conductance mechanosensitive channel, conserved site CDA09_22265 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CDA09_22265 IPR036019 Gated mechanosensitive channel CDA09_22270 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDA09_22270 IPR001279 Metallo-beta-lactamase CDA09_22275 IPR005116 Transport-associated OB, type 1 CDA09_22275 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22275 IPR003439 ABC transporter-like CDA09_22275 IPR011868 Molybdate ABC transporter, ATP-binding protein CDA09_22275 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_22275 IPR015852 ABC transporter, molybdenum import, ModC CDA09_22275 IPR017871 ABC transporter, conserved site CDA09_22275 IPR003593 AAA+ ATPase domain CDA09_22275 IPR004606 Molybdenum-pterin binding CDA09_22280 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDA09_22280 IPR011867 Molybdate ABC transporter, permease protein CDA09_22280 IPR035906 MetI-like superfamily CDA09_22285 IPR005950 Molybdate ABC transporter, substrate-binding protein CDA09_22290 IPR000847 Transcription regulator HTH, LysR CDA09_22290 IPR016462 Molybdate-dependent transcriptional regulator ModE CDA09_22290 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_22290 IPR036390 Winged helix DNA-binding domain superfamily CDA09_22290 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_22290 IPR003725 Molybdenum-binding protein ModE, N-terminal CDA09_22290 IPR004606 Molybdenum-pterin binding CDA09_22290 IPR005116 Transport-associated OB, type 1 CDA09_22295 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_22295 IPR016462 Molybdate-dependent transcriptional regulator ModE CDA09_22295 IPR000847 Transcription regulator HTH, LysR CDA09_22295 IPR008995 Molybdate/tungstate binding, C-terminal CDA09_22295 IPR004606 Molybdenum-pterin binding CDA09_22295 IPR003725 Molybdenum-binding protein ModE, N-terminal CDA09_22295 IPR036390 Winged helix DNA-binding domain superfamily CDA09_22295 IPR005116 Transport-associated OB, type 1 CDA09_22305 IPR001633 EAL domain CDA09_22305 IPR035919 EAL domain superfamily CDA09_22305 IPR000160 GGDEF domain CDA09_22305 IPR005330 MHYT domain CDA09_22305 IPR029787 Nucleotide cyclase CDA09_22335 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA CDA09_22335 IPR029044 Nucleotide-diphospho-sugar transferases CDA09_22335 IPR001173 Glycosyltransferase 2-like CDA09_22340 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB CDA09_22340 IPR002509 NodB homology domain CDA09_22340 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDA09_22340 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal CDA09_22440 IPR028096 EfeO-type cupredoxin-like domain CDA09_22440 IPR008972 Cupredoxin CDA09_22445 IPR004923 Iron permease FTR1/Fip1/EfeU CDA09_22460 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CDA09_22460 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDA09_22460 IPR006657 Molybdopterin dinucleotide-binding domain CDA09_22460 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDA09_22460 IPR041924 Formate dehydrogenase H, N-terminal CDA09_22460 IPR006478 Formate dehydrogenase, alpha subunit CDA09_22460 IPR006656 Molybdopterin oxidoreductase CDA09_22460 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDA09_22460 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDA09_22460 IPR009010 Aspartate decarboxylase-like domain superfamily CDA09_22460 IPR036010 2Fe-2S ferredoxin-like superfamily CDA09_22465 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CDA09_22465 IPR019554 Soluble ligand binding domain CDA09_22465 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CDA09_22465 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CDA09_22465 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CDA09_22465 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CDA09_22465 IPR011537 NADH ubiquinone oxidoreductase, F subunit CDA09_22470 IPR005119 LysR, substrate-binding CDA09_22470 IPR036390 Winged helix DNA-binding domain superfamily CDA09_22470 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_22470 IPR000847 Transcription regulator HTH, LysR CDA09_22475 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily CDA09_22475 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent CDA09_22475 IPR006124 Metalloenzyme CDA09_22475 IPR011258 BPG-independent PGAM, N-terminal CDA09_22475 IPR017850 Alkaline-phosphatase-like, core domain superfamily CDA09_22480 IPR022272 Lipocalin family conserved site CDA09_22480 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CDA09_22480 IPR002446 Lipocalin, bacterial CDA09_22480 IPR022271 Lipocalin, ApoD type CDA09_22480 IPR012674 Calycin CDA09_22500 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_22500 IPR036390 Winged helix DNA-binding domain superfamily CDA09_22500 IPR011991 ArsR-like helix-turn-helix domain CDA09_22500 IPR000835 MarR-type HTH domain CDA09_22505 IPR003423 Outer membrane efflux protein CDA09_22505 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CDA09_22510 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDA09_22510 IPR005694 Efflux pump membrane protein CDA09_22515 IPR020846 Major facilitator superfamily domain CDA09_22515 IPR011701 Major facilitator superfamily CDA09_22515 IPR004638 Drug resistance transporter EmrB-like CDA09_22515 IPR036259 MFS transporter superfamily CDA09_22525 IPR000792 Transcription regulator LuxR, C-terminal CDA09_22525 IPR001789 Signal transduction response regulator, receiver domain CDA09_22525 IPR016032 Signal transduction response regulator, C-terminal effector CDA09_22525 IPR011006 CheY-like superfamily CDA09_22530 IPR017171 Signal transduction histidine kinase, MctS CDA09_22530 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_22530 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_22530 IPR033480 Single Cache domain 2 CDA09_22530 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDA09_22535 IPR037914 SpoVT-AbrB domain superfamily CDA09_22535 IPR007159 SpoVT-AbrB domain CDA09_22535 IPR039052 Antitoxin PemI-like CDA09_22550 IPR014795 Vibrio phage ICP1, Orf50 CDA09_22550 IPR010985 Ribbon-helix-helix CDA09_22580 IPR011528 Nuclease-related domain, NERD CDA09_22585 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDA09_22585 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDA09_22585 IPR001647 DNA-binding HTH domain, TetR-type CDA09_22585 IPR009057 Homeobox-like domain superfamily CDA09_22585 IPR039538 BetI-type transcriptional repressor, C-terminal CDA09_22585 IPR017757 Transcriptional repressor BetI CDA09_22590 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_22590 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_22590 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_22590 IPR029045 ClpP/crotonase-like domain superfamily CDA09_22595 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_22595 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_22595 IPR029045 ClpP/crotonase-like domain superfamily CDA09_22595 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB CDA09_22600 IPR036291 NAD(P)-binding domain superfamily CDA09_22600 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_22600 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22600 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDA09_22605 IPR011957 Benzoate-CoA ligase family CDA09_22605 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_22605 IPR000873 AMP-dependent synthetase/ligase CDA09_22605 IPR042099 AMP-dependent synthetase-like superfamily CDA09_22615 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDA09_22615 IPR004681 TRAP transporter large membrane protein DctM CDA09_22625 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDA09_22625 IPR006089 Acyl-CoA dehydrogenase, conserved site CDA09_22625 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDA09_22625 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDA09_22625 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDA09_22625 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDA09_22625 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDA09_22630 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDA09_22630 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22630 IPR036291 NAD(P)-binding domain superfamily CDA09_22640 IPR005119 LysR, substrate-binding CDA09_22640 IPR036388 Winged helix-like DNA-binding domain superfamily CDA09_22640 IPR000847 Transcription regulator HTH, LysR CDA09_22640 IPR036390 Winged helix DNA-binding domain superfamily CDA09_22645 IPR008275 CoA enzyme activase CDA09_22645 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CDA09_22650 IPR008275 CoA enzyme activase CDA09_22650 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CDA09_22655 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_22660 IPR010327 FldB/FldC dehydratase alpha/beta subunit CDA09_22665 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDA09_22665 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC CDA09_22665 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDA09_22665 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDA09_22665 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CDA09_22665 IPR036291 NAD(P)-binding domain superfamily CDA09_22665 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CDA09_22670 IPR018527 Rubredoxin, iron-binding site CDA09_22670 IPR024934 Rubredoxin-like domain CDA09_22670 IPR024922 Rubredoxin CDA09_22670 IPR024935 Rubredoxin domain CDA09_22675 IPR029045 ClpP/crotonase-like domain superfamily CDA09_22675 IPR014748 Enoyl-CoA hydratase, C-terminal CDA09_22675 IPR001753 Enoyl-CoA hydratase/isomerase CDA09_22675 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDA09_22690 IPR017871 ABC transporter, conserved site CDA09_22690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22690 IPR003593 AAA+ ATPase domain CDA09_22690 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_22690 IPR003439 ABC transporter-like CDA09_22695 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_22695 IPR017871 ABC transporter, conserved site CDA09_22695 IPR003439 ABC transporter-like CDA09_22695 IPR003593 AAA+ ATPase domain CDA09_22695 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22705 IPR001851 ABC transporter, permease CDA09_22715 IPR011957 Benzoate-CoA ligase family CDA09_22715 IPR000873 AMP-dependent synthetase/ligase CDA09_22715 IPR025110 AMP-binding enzyme, C-terminal domain CDA09_22730 IPR031322 Shikimate kinase/gluconokinase CDA09_22730 IPR023000 Shikimate kinase, conserved site CDA09_22730 IPR000623 Shikimate kinase/Threonine synthase-like 1 CDA09_22730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22750 IPR012793 Beta-ketoadipyl CoA thiolase CDA09_22750 IPR020617 Thiolase, C-terminal CDA09_22750 IPR016039 Thiolase-like CDA09_22750 IPR020616 Thiolase, N-terminal CDA09_22750 IPR002155 Thiolase CDA09_22750 IPR020615 Thiolase, acyl-enzyme intermediate active site CDA09_22750 IPR020610 Thiolase, active site CDA09_22750 IPR020613 Thiolase, conserved site CDA09_22755 IPR033480 Single Cache domain 2 CDA09_22755 IPR003660 HAMP domain CDA09_22755 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDA09_22755 IPR004090 Chemotaxis methyl-accepting receptor CDA09_22770 IPR013702 FIST domain, N-terminal CDA09_22770 IPR016741 Uncharacterised conserved protein UCP018953 CDA09_22770 IPR019494 FIST, C-domain CDA09_22790 IPR003593 AAA+ ATPase domain CDA09_22790 IPR032781 ABC-transporter extension domain CDA09_22790 IPR003439 ABC transporter-like CDA09_22790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22795 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CDA09_22795 IPR013789 Phosphotransferase system, mannose family IIA component CDA09_22795 IPR033887 PTS system mannose/sorbose specific IIA subunit CDA09_22795 IPR004701 Phosphotransferase system, mannose-type IIA component CDA09_22800 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CDA09_22800 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CDA09_22800 IPR035895 HPr-like superfamily CDA09_22800 IPR000032 Phosphocarrier protein HPr-like CDA09_22805 IPR036618 PtsI, HPr-binding domain superfamily CDA09_22805 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDA09_22805 IPR008731 Phosphotransferase system, enzyme I N-terminal CDA09_22805 IPR018274 PEP-utilising enzyme, active site CDA09_22805 IPR000121 PEP-utilising enzyme, C-terminal CDA09_22805 IPR006318 Phosphotransferase system, enzyme I-like CDA09_22805 IPR023151 PEP-utilising enzyme, conserved site CDA09_22805 IPR040442 Pyruvate kinase-like domain superfamily CDA09_22805 IPR036637 Phosphohistidine domain superfamily CDA09_22805 IPR008279 PEP-utilising enzyme, mobile domain CDA09_22805 IPR024692 Phosphotransferase system, enzyme I CDA09_22810 IPR008220 Homoserine/serine acetyltransferase MetX-like CDA09_22810 IPR000073 Alpha/beta hydrolase fold-1 CDA09_22810 IPR029058 Alpha/Beta hydrolase fold CDA09_22825 IPR036259 MFS transporter superfamily CDA09_22825 IPR011701 Major facilitator superfamily CDA09_22825 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 CDA09_22840 IPR004090 Chemotaxis methyl-accepting receptor CDA09_22840 IPR003660 HAMP domain CDA09_22840 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDA09_22840 IPR033480 Single Cache domain 2 CDA09_22845 IPR002347 Short-chain dehydrogenase/reductase SDR CDA09_22845 IPR036291 NAD(P)-binding domain superfamily CDA09_22855 IPR005163 3-alpha domain CDA09_22855 IPR005302 Molybdenum cofactor sulfurase, C-terminal CDA09_22855 IPR011037 Pyruvate kinase-like, insert domain superfamily CDA09_22880 IPR036676 PurM-like, C-terminal domain superfamily CDA09_22880 IPR010918 PurM-like, C-terminal domain CDA09_22880 IPR011854 Carbamoyl dehydratase HypE CDA09_22880 IPR016188 PurM-like, N-terminal domain CDA09_22880 IPR036921 PurM-like, N-terminal domain superfamily CDA09_22885 IPR042243 HypD, domain 2 CDA09_22885 IPR002780 Hydrogenase formation HypD protein CDA09_22885 IPR042244 HypD, domain 1 CDA09_22890 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CDA09_22890 IPR019812 Hydrogenase assembly chaperone, conserved site CDA09_22890 IPR037254 HupF/HypC superfamily CDA09_22895 IPR011125 Zinc finger, HypF-type CDA09_22895 IPR006070 YrdC-like domain CDA09_22895 IPR041440 HypF, Kae1-like domain CDA09_22895 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDA09_22895 IPR004421 Carbamoyltransferase, HypF-type CDA09_22895 IPR001792 Acylphosphatase-like domain CDA09_22895 IPR036046 Acylphosphatase-like domain superfamily CDA09_22895 IPR017968 Acylphosphatase, conserved site CDA09_22900 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CDA09_22900 IPR004392 Hydrogenase maturation factor HypB CDA09_22900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22905 IPR000688 Hydrogenase maturation factor HypA/HybF CDA09_22905 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CDA09_22915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22915 IPR001650 Helicase, C-terminal CDA09_22915 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain CDA09_22915 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily CDA09_22915 IPR041236 Primosomal protein N, C-terminal domain CDA09_22915 IPR011545 DEAD/DEAH box helicase domain CDA09_22915 IPR041222 Primosomal protein N', 3' DNA-binding domain CDA09_22915 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDA09_22915 IPR005259 Primosomal protein N' CDA09_22920 IPR038071 UROD/MetE-like superfamily CDA09_22920 IPR006361 Uroporphyrinogen decarboxylase HemE CDA09_22920 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CDA09_22925 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein CDA09_22935 IPR002639 Urease accessory protein UreF CDA09_22935 IPR038277 UreF domain superfamily CDA09_22940 IPR012406 Urease accessory protein UreE CDA09_22940 IPR007864 Urease accessory protein UreE, C-terminal domain CDA09_22940 IPR004029 UreE urease accessory, N-terminal CDA09_22940 IPR036118 UreE urease accessory, N-terminal domain superfamily CDA09_22940 IPR036675 UreE, C-terminal domain superfamily CDA09_22945 IPR005848 Urease, alpha subunit CDA09_22945 IPR029754 Urease nickel binding site CDA09_22945 IPR017950 Urease active site CDA09_22945 IPR011612 Urease alpha-subunit, N-terminal domain CDA09_22945 IPR011059 Metal-dependent hydrolase, composite domain superfamily CDA09_22945 IPR006680 Amidohydrolase-related CDA09_22945 IPR032466 Metal-dependent hydrolase CDA09_22945 IPR017951 Urease alpha subunit, C-terminal CDA09_22950 IPR036461 Urease, beta subunit superfamily CDA09_22950 IPR002019 Urease, beta subunit CDA09_22955 IPR036463 Urease, gamma subunit superfamily CDA09_22955 IPR002026 Urease, gamma/gamma-beta subunit CDA09_22955 IPR012010 Urease, gamma subunit CDA09_22960 IPR002669 Urease accessory protein UreD CDA09_22965 IPR003593 AAA+ ATPase domain CDA09_22965 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDA09_22965 IPR003439 ABC transporter-like CDA09_22965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22965 IPR017871 ABC transporter, conserved site CDA09_22970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22970 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDA09_22970 IPR003439 ABC transporter-like CDA09_22970 IPR017871 ABC transporter, conserved site CDA09_22970 IPR003593 AAA+ ATPase domain CDA09_22980 IPR001851 ABC transporter, permease CDA09_22985 IPR028082 Periplasmic binding protein-like I CDA09_22985 IPR000709 Leu/Ile/Val-binding protein CDA09_22985 IPR039570 AmiC, periplasmic binding domain CDA09_22990 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDA09_22990 IPR003660 HAMP domain CDA09_22995 IPR009057 Homeobox-like domain superfamily CDA09_22995 IPR002197 DNA binding HTH domain, Fis-type CDA09_22995 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_22995 IPR001789 Signal transduction response regulator, receiver domain CDA09_22995 IPR011006 CheY-like superfamily CDA09_22995 IPR002078 RNA polymerase sigma factor 54 interaction domain CDA09_22995 IPR003593 AAA+ ATPase domain CDA09_22995 IPR025944 Sigma-54 interaction domain, conserved site CDA09_23000 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDA09_23000 IPR035965 PAS domain superfamily CDA09_23000 IPR000014 PAS domain CDA09_23000 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDA09_23000 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator CDA09_23000 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDA09_23000 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDA09_23000 IPR005467 Histidine kinase domain CDA09_23000 IPR013767 PAS fold CDA09_23000 IPR003594 Histidine kinase/HSP90-like ATPase CDA09_23000 IPR003660 HAMP domain CDA09_23010 IPR004573 rRNA small subunit methyltransferase B CDA09_23010 IPR006027 NusB/RsmB/TIM44 CDA09_23010 IPR035926 NusB-like superfamily CDA09_23010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_23010 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CDA09_23010 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CDA09_23010 IPR023267 RNA (C5-cytosine) methyltransferase CDA09_23015 IPR001045 Spermidine/spermine synthases CDA09_23015 IPR035246 Spermidine synthase, tetramerisation domain CDA09_23015 IPR030374 Polyamine biosynthesis domain CDA09_23015 IPR037163 Spermidine synthase, tetramerisation domain superfamily CDA09_23015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDA09_23020 IPR006073 GTP binding domain CDA09_23020 IPR004520 tRNA modification GTPase MnmE CDA09_23020 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDA09_23020 IPR031168 TrmE-type guanine nucleotide-binding domain CDA09_23020 IPR027368 tRNA modification GTPase MnmE domain 2 CDA09_23020 IPR005225 Small GTP-binding protein domain CDA09_23020 IPR025867 MnmE, helical domain CDA09_23020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDA09_23020 IPR018948 GTP-binding protein TrmE, N-terminal CDA09_23025 IPR038210 Membrane insertase YidC, periplasmic domain CDA09_23025 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CDA09_23025 IPR028053 Membrane insertase YidC, N-terminal CDA09_23025 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CDA09_23025 IPR019998 Membrane insertase YidC CDA09_23025 IPR038221 YidC, periplasmic domain superfamily CDA09_23030 IPR002696 Putative membrane protein insertion efficiency factor CDA09_23035 IPR020568 Ribosomal protein S5 domain 2-type fold CDA09_23035 IPR000100 Ribonuclease P CDA09_23035 IPR020539 Ribonuclease P, conserved site CDA09_23035 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDA09_23075 IPR009953 Dinitrogenase reductase ADP-ribosyltransferase CDA09_23085 IPR036397 Ribonuclease H superfamily CDA09_23085 IPR012337 Ribonuclease H-like superfamily CDA09_23085 IPR001584 Integrase, catalytic core CDA09_23085 IPR025948 HTH-like domain CDA09_23105 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CDA09_23105 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CDA09_23105 IPR029069 HotDog domain superfamily