CDA09_00010 SM00382 ATPases associated with a variety of cellular activities CDA09_00010 SM00760 Bacterial dnaA protein helix-turn-helix domain CDA09_00015 SM00480 DNA polymerase III beta subunit CDA09_00020 SM00387 Histidine kinase-like ATPases CDA09_00020 SM00433 TopoisomeraseII CDA09_00040 SM00382 ATPases associated with a variety of cellular activities CDA09_00085 SM00267 diguanylate cyclase CDA09_00085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_00105 SM00052 Putative diguanylate phosphodiesterase CDA09_00105 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_00105 SM00091 PAS domain CDA09_00105 SM00267 diguanylate cyclase CDA09_00120 SM00382 ATPases associated with a variety of cellular activities CDA09_00125 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CDA09_00125 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CDA09_00130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDA09_00140 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_00140 SM00091 PAS domain CDA09_00140 SM00267 diguanylate cyclase CDA09_00160 SM00052 Putative diguanylate phosphodiesterase CDA09_00160 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDA09_00160 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_00160 SM00091 PAS domain CDA09_00160 SM00267 diguanylate cyclase CDA09_00160 SM00448 cheY-homologous receiver domain CDA09_00185 SM00841 Elongation factor P, C-terminal CDA09_00185 SM01185 CDA09_00185 CDA09_00195 SM00382 ATPases associated with a variety of cellular activities CDA09_00225 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDA09_00245 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CDA09_00245 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CDA09_00245 SM00493 CDA09_00245 CDA09_00260 SM00257 Lysin motif CDA09_00280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_00280 SM00387 Histidine kinase-like ATPases CDA09_00280 SM00388 His Kinase A (phosphoacceptor) domain CDA09_00285 SM00382 ATPases associated with a variety of cellular activities CDA09_00285 SM00448 cheY-homologous receiver domain CDA09_00345 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDA09_00380 SM00320 WD40 repeats CDA09_00405 SM00062 Bacterial periplasmic substrate-binding proteins CDA09_00405 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CDA09_00420 SM00382 ATPases associated with a variety of cellular activities CDA09_00440 SM01228 CDA09_00440 CDA09_00455 SM00470 ParB-like nuclease domain CDA09_00495 SM00382 ATPases associated with a variety of cellular activities CDA09_00510 SM00978 CDA09_00510 CDA09_00525 SM00448 cheY-homologous receiver domain CDA09_00525 SM00862 Transcriptional regulatory protein, C terminal CDA09_00530 SM00387 Histidine kinase-like ATPases CDA09_00530 SM00388 His Kinase A (phosphoacceptor) domain CDA09_00550 SM00845 GatB domain CDA09_00600 SM00936 Penicillin-binding protein 5, C-terminal domain CDA09_00620 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_00640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDA09_00640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_00655 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDA09_00660 SM00421 helix_turn_helix, Lux Regulon CDA09_00660 SM00448 cheY-homologous receiver domain CDA09_00665 SM00387 Histidine kinase-like ATPases CDA09_00665 SM00388 His Kinase A (phosphoacceptor) domain CDA09_00680 SM00448 cheY-homologous receiver domain CDA09_00680 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDA09_00685 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_00685 SM00091 PAS domain CDA09_00685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_00685 SM00387 Histidine kinase-like ATPases CDA09_00685 SM00388 His Kinase A (phosphoacceptor) domain CDA09_00685 SM00448 cheY-homologous receiver domain CDA09_00730 SM00487 DEAD-like helicases superfamily CDA09_00730 SM00490 helicase superfamily c-terminal domain CDA09_00750 SM00382 ATPases associated with a variety of cellular activities CDA09_00755 SM00382 ATPases associated with a variety of cellular activities CDA09_00825 SM00382 ATPases associated with a variety of cellular activities CDA09_00870 SM00382 ATPases associated with a variety of cellular activities CDA09_00885 SM00382 ATPases associated with a variety of cellular activities CDA09_00915 SM00448 cheY-homologous receiver domain CDA09_00915 SM00862 Transcriptional regulatory protein, C terminal CDA09_00930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_00930 SM00387 Histidine kinase-like ATPases CDA09_00930 SM00388 His Kinase A (phosphoacceptor) domain CDA09_00935 SM00382 ATPases associated with a variety of cellular activities CDA09_00980 SM00387 Histidine kinase-like ATPases CDA09_00980 SM00388 His Kinase A (phosphoacceptor) domain CDA09_00985 SM00382 ATPases associated with a variety of cellular activities CDA09_00985 SM00448 cheY-homologous receiver domain CDA09_01045 SM00448 cheY-homologous receiver domain CDA09_01050 SM00382 ATPases associated with a variety of cellular activities CDA09_01075 SM00965 Secretin and TonB N terminus short domain CDA09_01095 SM00357 Cold shock protein domain CDA09_01105 SM00244 prohibitin homologues CDA09_01135 SM00563 Phosphate acyltransferases CDA09_01145 SM00460 Transglutaminase/protease-like homologues CDA09_01175 SM00271 DnaJ molecular chaperone homology domain CDA09_01200 SM00072 Guanylate kinase homologues. CDA09_01205 SM01409 CDA09_01205 CDA09_01210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDA09_01210 SM00954 Region found in RelA / SpoT proteins CDA09_01215 SM00833 Cobalamin synthesis protein cobW C-terminal domain CDA09_01220 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDA09_01235 SM00465 GIY-YIG type nucleases (URI domain) CDA09_01235 SM00479 CDA09_01235 CDA09_01240 SM00100 Cyclic nucleotide-monophosphate binding domain CDA09_01240 SM00419 helix_turn_helix, cAMP Regulatory protein CDA09_01245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_01245 SM00387 Histidine kinase-like ATPases CDA09_01250 SM00421 helix_turn_helix, Lux Regulon CDA09_01250 SM00448 cheY-homologous receiver domain CDA09_01265 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDA09_01290 SM00382 ATPases associated with a variety of cellular activities CDA09_01350 SM00671 Sel1-like repeats. CDA09_01355 SM00382 ATPases associated with a variety of cellular activities CDA09_01355 SM00448 cheY-homologous receiver domain CDA09_01360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_01360 SM00387 Histidine kinase-like ATPases CDA09_01360 SM00388 His Kinase A (phosphoacceptor) domain CDA09_01365 SM00671 Sel1-like repeats. CDA09_01405 SM00028 Tetratricopeptide repeats CDA09_01485 SM00028 Tetratricopeptide repeats CDA09_01490 SM00028 Tetratricopeptide repeats CDA09_01495 SM00028 Tetratricopeptide repeats CDA09_01545 SM00267 diguanylate cyclase CDA09_01560 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_01570 SM00052 Putative diguanylate phosphodiesterase CDA09_01570 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_01570 SM00091 PAS domain CDA09_01570 SM00267 diguanylate cyclase CDA09_01575 SM01005 Alanine racemase, C-terminal domain CDA09_01585 SM00344 helix_turn_helix ASNC type CDA09_01625 SM00052 Putative diguanylate phosphodiesterase CDA09_01625 SM00267 diguanylate cyclase CDA09_01625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_01625 SM00448 cheY-homologous receiver domain CDA09_01630 SM00138 Methyltransferase, chemotaxis proteins CDA09_01635 SM00260 Two component signalling adaptor domain CDA09_01640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDA09_01645 SM00073 Histidine Phosphotransfer domain CDA09_01645 SM00260 Two component signalling adaptor domain CDA09_01645 SM00387 Histidine kinase-like ATPases CDA09_01645 SM00448 cheY-homologous receiver domain CDA09_01645 SM01231 CDA09_01645 CDA09_01650 SM00448 cheY-homologous receiver domain CDA09_01655 SM00387 Histidine kinase-like ATPases CDA09_01655 SM00388 His Kinase A (phosphoacceptor) domain CDA09_01655 SM00448 cheY-homologous receiver domain CDA09_01660 SM00052 Putative diguanylate phosphodiesterase CDA09_01660 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_01660 SM00091 PAS domain CDA09_01660 SM00267 diguanylate cyclase CDA09_01660 SM00448 cheY-homologous receiver domain CDA09_01735 SM00382 ATPases associated with a variety of cellular activities CDA09_01740 SM00382 ATPases associated with a variety of cellular activities CDA09_01745 SM00028 Tetratricopeptide repeats CDA09_01765 SM00506 Appr-1"-p processing enzyme CDA09_01785 SM00411 bacterial (prokaryotic) histone like domain CDA09_01790 SM00487 DEAD-like helicases superfamily CDA09_01790 SM00490 helicase superfamily c-terminal domain CDA09_01835 SM00448 cheY-homologous receiver domain CDA09_01850 SM00073 Histidine Phosphotransfer domain CDA09_01850 SM00387 Histidine kinase-like ATPases CDA09_01850 SM00388 His Kinase A (phosphoacceptor) domain CDA09_01850 SM00448 cheY-homologous receiver domain CDA09_01865 SM00448 cheY-homologous receiver domain CDA09_01870 SM00448 cheY-homologous receiver domain CDA09_01875 SM00091 PAS domain CDA09_01875 SM00387 Histidine kinase-like ATPases CDA09_01875 SM00388 His Kinase A (phosphoacceptor) domain CDA09_01875 SM00448 cheY-homologous receiver domain CDA09_01875 SM01079 CDA09_01875 CDA09_01880 SM00052 Putative diguanylate phosphodiesterase CDA09_01880 SM00448 cheY-homologous receiver domain CDA09_01985 SM00382 ATPases associated with a variety of cellular activities CDA09_02040 SM00052 Putative diguanylate phosphodiesterase CDA09_02040 SM00267 diguanylate cyclase CDA09_02075 SM00382 ATPases associated with a variety of cellular activities CDA09_02105 SM01092 CO dehydrogenase flavoprotein C-terminal domain CDA09_02110 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDA09_02155 SM00836 DALR anticodon binding domain CDA09_02155 SM01016 Arginyl tRNA synthetase N terminal dom CDA09_02250 SM00849 Metallo-beta-lactamase superfamily CDA09_02255 SM00422 helix_turn_helix, mercury resistance CDA09_02260 SM00947 Carbonic anhydrase CDA09_02295 SM00849 Metallo-beta-lactamase superfamily CDA09_02325 SM00869 Autotransporter beta-domain CDA09_02370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDA09_02380 SM00996 S-adenosyl-L-homocysteine hydrolase CDA09_02380 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CDA09_02390 SM00357 Cold shock protein domain CDA09_02440 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CDA09_02450 SM00382 ATPases associated with a variety of cellular activities CDA09_02455 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CDA09_02465 SM00316 Ribosomal protein S1-like RNA-binding domain CDA09_02515 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CDA09_02515 SM00474 3'-5' exonuclease CDA09_02515 SM00475 5'-3' exonuclease CDA09_02515 SM00482 DNA polymerase A domain CDA09_02585 SM00382 ATPases associated with a variety of cellular activities CDA09_02605 SM00855 Phosphoglycerate mutase family CDA09_02620 SM00267 diguanylate cyclase CDA09_02640 SM00382 ATPases associated with a variety of cellular activities CDA09_02710 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_02715 SM00644 CDA09_02715 CDA09_02735 SM00919 Malic enzyme, NAD binding domain CDA09_02735 SM01274 CDA09_02735 CDA09_02750 SM00346 helix_turn_helix isocitrate lyase regulation CDA09_02755 SM00363 S4 RNA-binding domain CDA09_02775 SM00382 ATPases associated with a variety of cellular activities CDA09_02800 SM00986 Uracil DNA glycosylase superfamily CDA09_02800 SM00987 UreE urease accessory protein, C-terminal domain CDA09_02810 SM00382 ATPases associated with a variety of cellular activities CDA09_02810 SM00487 DEAD-like helicases superfamily CDA09_02810 SM00490 helicase superfamily c-terminal domain CDA09_02810 SM00847 Helicase associated domain (HA2) Add an annotation CDA09_02835 SM00382 ATPases associated with a variety of cellular activities CDA09_02870 SM00984 UDP binding domain CDA09_02885 SM00382 ATPases associated with a variety of cellular activities CDA09_02905 SM00829 Enoylreductase CDA09_02910 SM00267 diguanylate cyclase CDA09_02910 SM00448 cheY-homologous receiver domain CDA09_02955 SM00965 Secretin and TonB N terminus short domain CDA09_02975 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CDA09_02995 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDA09_02995 SM00895 CDA09_02995 CDA09_03015 SM00331 Sigma factor PP2C-like phosphatases CDA09_03015 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CDA09_03025 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CDA09_03025 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CDA09_03045 SM00052 Putative diguanylate phosphodiesterase CDA09_03045 SM00091 PAS domain CDA09_03050 SM00487 DEAD-like helicases superfamily CDA09_03050 SM00490 helicase superfamily c-terminal domain CDA09_03090 SM00867 YceI-like domain CDA09_03205 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_03210 SM00905 Dihydroneopterin aldolase CDA09_03225 SM00878 Biotin carboxylase C-terminal domain CDA09_03290 SM00861 Transketolase, pyrimidine binding domain CDA09_03330 SM00904 Riboflavin kinase CDA09_03335 SM00646 CDA09_03335 CDA09_03355 SM00450 Rhodanese Homology Domain CDA09_03390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_03390 SM00387 Histidine kinase-like ATPases CDA09_03390 SM00388 His Kinase A (phosphoacceptor) domain CDA09_03395 SM00448 cheY-homologous receiver domain CDA09_03395 SM00862 Transcriptional regulatory protein, C terminal CDA09_03415 SM00382 ATPases associated with a variety of cellular activities CDA09_03415 SM01086 C-terminal, D2-small domain, of ClpB protein CDA09_03425 SM00357 Cold shock protein domain CDA09_03490 SM01329 CDA09_03490 CDA09_03500 SM00838 Elongation factor G C-terminus CDA09_03500 SM00889 Elongation factor G, domain IV CDA09_03580 SM00460 Transglutaminase/protease-like homologues CDA09_03590 SM00460 Transglutaminase/protease-like homologues CDA09_03600 SM00257 Lysin motif CDA09_03660 SM00382 ATPases associated with a variety of cellular activities CDA09_03660 SM01086 C-terminal, D2-small domain, of ClpB protein CDA09_03675 SM00400 zinc finger CDA09_03675 SM00493 CDA09_03675 CDA09_03675 SM00766 DNA primase DnaG DnaB-binding CDA09_03695 SM01207 CDA09_03695 CDA09_03700 SM00905 Dihydroneopterin aldolase CDA09_03705 SM00528 Domain in histone-like proteins of HNS family CDA09_03760 SM00919 Malic enzyme, NAD binding domain CDA09_03760 SM01274 CDA09_03760 CDA09_03770 SM00829 Enoylreductase CDA09_03780 SM00481 DNA polymerase alpha chain like domain CDA09_03875 SM00925 MltA specific insert domain CDA09_03925 SM00382 ATPases associated with a variety of cellular activities CDA09_03925 SM00448 cheY-homologous receiver domain CDA09_03930 SM00387 Histidine kinase-like ATPases CDA09_03930 SM00388 His Kinase A (phosphoacceptor) domain CDA09_03940 SM01230 CDA09_03940 CDA09_03950 SM00450 Rhodanese Homology Domain CDA09_03965 SM00155 Phospholipase D. Active site motifs. CDA09_04025 SM01400 CDA09_04025 CDA09_04045 SM00028 Tetratricopeptide repeats CDA09_04050 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CDA09_04050 SM01232 CDA09_04050 CDA09_04085 SM00382 ATPases associated with a variety of cellular activities CDA09_04085 SM00962 SRP54-type protein, GTPase domain CDA09_04085 SM00963 SRP54-type protein, helical bundle domain CDA09_04090 SM00382 ATPases associated with a variety of cellular activities CDA09_04105 SM00091 PAS domain CDA09_04105 SM00387 Histidine kinase-like ATPases CDA09_04105 SM00388 His Kinase A (phosphoacceptor) domain CDA09_04105 SM00448 cheY-homologous receiver domain CDA09_04120 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDA09_04145 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_04160 SM00116 Domain in cystathionine beta-synthase and other proteins. CDA09_04160 SM01091 Transporter associated domain CDA09_04185 SM00563 Phosphate acyltransferases CDA09_04190 SM00388 His Kinase A (phosphoacceptor) domain CDA09_04220 SM00116 Domain in cystathionine beta-synthase and other proteins. CDA09_04230 SM00382 ATPases associated with a variety of cellular activities CDA09_04260 SM00382 ATPases associated with a variety of cellular activities CDA09_04350 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDA09_04375 SM00881 CoA binding domain CDA09_04380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_04380 SM00091 PAS domain CDA09_04380 SM00387 Histidine kinase-like ATPases CDA09_04380 SM00388 His Kinase A (phosphoacceptor) domain CDA09_04380 SM00448 cheY-homologous receiver domain CDA09_04400 SM00562 CDA09_04400 CDA09_04410 SM00028 Tetratricopeptide repeats CDA09_04435 SM00564 beta-propeller repeat CDA09_04440 SM00382 ATPases associated with a variety of cellular activities CDA09_04455 SM00244 prohibitin homologues CDA09_04460 SM00244 prohibitin homologues CDA09_04475 SM00788 Adenylosuccinate synthetase CDA09_04490 SM00316 Ribosomal protein S1-like RNA-binding domain CDA09_04490 SM00357 Cold shock protein domain CDA09_04490 SM00955 CDA09_04490 CDA09_04495 SM00967 RNA 2'-O ribose methyltransferase substrate binding CDA09_04500 SM01012 CDA09_04500 CDA09_04515 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_04545 SM00382 ATPases associated with a variety of cellular activities CDA09_04570 SM00220 Serine/Threonine protein kinases, catalytic domain CDA09_04570 SM00331 Sigma factor PP2C-like phosphatases CDA09_04570 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CDA09_04575 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDA09_04580 SM00052 Putative diguanylate phosphodiesterase CDA09_04580 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_04580 SM00091 PAS domain CDA09_04580 SM00267 diguanylate cyclase CDA09_04610 SM00382 ATPases associated with a variety of cellular activities CDA09_04620 SM00493 CDA09_04620 CDA09_04665 SM00344 helix_turn_helix ASNC type CDA09_04685 SM00052 Putative diguanylate phosphodiesterase CDA09_04685 SM00267 diguanylate cyclase CDA09_04695 SM00052 Putative diguanylate phosphodiesterase CDA09_04695 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_04695 SM00267 diguanylate cyclase CDA09_04695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_04720 SM00822 CDA09_04720 CDA09_04735 SM00855 Phosphoglycerate mutase family CDA09_04740 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDA09_04740 SM00895 CDA09_04740 CDA09_04765 SM00564 beta-propeller repeat CDA09_04780 SM00829 Enoylreductase CDA09_04785 SM00421 helix_turn_helix, Lux Regulon CDA09_04785 SM00448 cheY-homologous receiver domain CDA09_04800 SM00883 Chaperonin 10 Kd subunit CDA09_04810 SM00448 cheY-homologous receiver domain CDA09_04810 SM00862 Transcriptional regulatory protein, C terminal CDA09_04815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_04815 SM00387 Histidine kinase-like ATPases CDA09_04815 SM00388 His Kinase A (phosphoacceptor) domain CDA09_04860 SM00530 Helix-turn-helix XRE-family like proteins CDA09_04865 SM00530 Helix-turn-helix XRE-family like proteins CDA09_04895 SM00382 ATPases associated with a variety of cellular activities CDA09_04935 SM00937 CDA09_04935 CDA09_04950 SM00100 Cyclic nucleotide-monophosphate binding domain CDA09_04950 SM00220 Serine/Threonine protein kinases, catalytic domain CDA09_04960 SM00448 cheY-homologous receiver domain CDA09_04960 SM00850 LytTr DNA-binding domain CDA09_04995 SM01209 CDA09_04995 CDA09_04995 SM01210 CDA09_04995 CDA09_05000 SM00798 AICARFT/IMPCHase bienzyme CDA09_05000 SM00851 MGS-like domain CDA09_05020 SM01011 Aminopeptidase P, N-terminal domain CDA09_05050 SM00650 Ribosomal RNA adenine dimethylases CDA09_05060 SM00419 helix_turn_helix, cAMP Regulatory protein CDA09_05115 SM00052 Putative diguanylate phosphodiesterase CDA09_05115 SM00267 diguanylate cyclase CDA09_05125 SM00267 diguanylate cyclase CDA09_05145 SM01049 CDA09_05145 CDA09_05160 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDA09_05165 SM00861 Transketolase, pyrimidine binding domain CDA09_05195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_05195 SM00091 PAS domain CDA09_05195 SM00267 diguanylate cyclase CDA09_05215 SM00852 Probable molybdopterin binding domain CDA09_05230 SM01004 Delta-aminolevulinic acid dehydratase CDA09_05245 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_05245 SM00876 Biotin and Thiamin Synthesis associated domain CDA09_05280 SM00450 Rhodanese Homology Domain CDA09_05285 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDA09_05290 SM00855 Phosphoglycerate mutase family CDA09_05300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDA09_05300 SM00245 tail specific protease CDA09_05325 SM00855 Phosphoglycerate mutase family CDA09_05340 SM00852 Probable molybdopterin binding domain CDA09_05375 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CDA09_05430 SM00855 Phosphoglycerate mutase family CDA09_05435 SM00880 CDA09_05435 CDA09_05435 SM01118 CDA09_05435 CDA09_05465 SM00382 ATPases associated with a variety of cellular activities CDA09_05465 SM00448 cheY-homologous receiver domain CDA09_05475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_05475 SM00387 Histidine kinase-like ATPases CDA09_05475 SM00388 His Kinase A (phosphoacceptor) domain CDA09_05555 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDA09_05575 SM00363 S4 RNA-binding domain CDA09_05580 SM00052 Putative diguanylate phosphodiesterase CDA09_05580 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_05580 SM00091 PAS domain CDA09_05580 SM00267 diguanylate cyclase CDA09_05580 SM01079 CDA09_05580 CDA09_05620 SM00344 helix_turn_helix ASNC type CDA09_05645 SM00342 helix_turn_helix, arabinose operon control protein CDA09_05660 SM00878 Biotin carboxylase C-terminal domain CDA09_05690 SM00267 diguanylate cyclase CDA09_05690 SM00448 cheY-homologous receiver domain CDA09_05715 SM00138 Methyltransferase, chemotaxis proteins CDA09_05725 SM00260 Two component signalling adaptor domain CDA09_05725 SM00448 cheY-homologous receiver domain CDA09_05730 SM00260 Two component signalling adaptor domain CDA09_05730 SM00448 cheY-homologous receiver domain CDA09_05735 SM00448 cheY-homologous receiver domain CDA09_05745 SM00073 Histidine Phosphotransfer domain CDA09_05745 SM00260 Two component signalling adaptor domain CDA09_05745 SM00387 Histidine kinase-like ATPases CDA09_05745 SM01231 CDA09_05745 CDA09_05770 SM00382 ATPases associated with a variety of cellular activities CDA09_05785 SM00052 Putative diguanylate phosphodiesterase CDA09_05830 SM00028 Tetratricopeptide repeats CDA09_05835 SM00382 ATPases associated with a variety of cellular activities CDA09_05850 SM00382 ATPases associated with a variety of cellular activities CDA09_05910 SM00382 ATPases associated with a variety of cellular activities CDA09_05915 SM00062 Bacterial periplasmic substrate-binding proteins CDA09_06035 SM00382 ATPases associated with a variety of cellular activities CDA09_06095 SM00917 LeuA allosteric (dimerisation) domain CDA09_06120 SM00448 cheY-homologous receiver domain CDA09_06120 SM00862 Transcriptional regulatory protein, C terminal CDA09_06125 SM00387 Histidine kinase-like ATPases CDA09_06180 SM00116 Domain in cystathionine beta-synthase and other proteins. CDA09_06275 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDA09_06280 SM00387 Histidine kinase-like ATPases CDA09_06280 SM00388 His Kinase A (phosphoacceptor) domain CDA09_06285 SM00448 cheY-homologous receiver domain CDA09_06285 SM00862 Transcriptional regulatory protein, C terminal CDA09_06305 SM00448 cheY-homologous receiver domain CDA09_06305 SM00862 Transcriptional regulatory protein, C terminal CDA09_06310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_06310 SM00387 Histidine kinase-like ATPases CDA09_06340 SM00098 Alkaline phosphatase homologues CDA09_06475 SM00749 bacterial OsmY and nodulation domain CDA09_06485 SM00387 Histidine kinase-like ATPases CDA09_06490 SM00448 cheY-homologous receiver domain CDA09_06495 SM00421 helix_turn_helix, Lux Regulon CDA09_06495 SM00448 cheY-homologous receiver domain CDA09_06500 SM00344 helix_turn_helix ASNC type CDA09_06505 SM00917 LeuA allosteric (dimerisation) domain CDA09_06525 SM00974 CDA09_06525 CDA09_06540 SM00382 ATPases associated with a variety of cellular activities CDA09_06570 SM00382 ATPases associated with a variety of cellular activities CDA09_06575 SM00062 Bacterial periplasmic substrate-binding proteins CDA09_06580 SM00870 CDA09_06580 CDA09_06595 SM00382 ATPases associated with a variety of cellular activities CDA09_06600 SM00382 ATPases associated with a variety of cellular activities CDA09_06600 SM00448 cheY-homologous receiver domain CDA09_06620 SM00052 Putative diguanylate phosphodiesterase CDA09_06620 SM00267 diguanylate cyclase CDA09_06620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_06705 SM00858 CDA09_06705 CDA09_06815 SM00382 ATPases associated with a variety of cellular activities CDA09_06835 SM00387 Histidine kinase-like ATPases CDA09_06835 SM00388 His Kinase A (phosphoacceptor) domain CDA09_06840 SM00382 ATPases associated with a variety of cellular activities CDA09_06840 SM00448 cheY-homologous receiver domain CDA09_06850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_06850 SM00091 PAS domain CDA09_06850 SM00387 Histidine kinase-like ATPases CDA09_06850 SM00388 His Kinase A (phosphoacceptor) domain CDA09_06850 SM00448 cheY-homologous receiver domain CDA09_06895 SM00267 diguanylate cyclase CDA09_06920 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_06920 SM00091 PAS domain CDA09_06920 SM00387 Histidine kinase-like ATPases CDA09_06920 SM00388 His Kinase A (phosphoacceptor) domain CDA09_06925 SM00421 helix_turn_helix, Lux Regulon CDA09_06925 SM00448 cheY-homologous receiver domain CDA09_06950 SM01001 AIR carboxylase CDA09_07040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDA09_07085 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDA09_07095 SM00935 Outer membrane protein (OmpH-like) CDA09_07130 SM00967 RNA 2'-O ribose methyltransferase substrate binding CDA09_07220 SM00382 ATPases associated with a variety of cellular activities CDA09_07235 SM00900 CDA09_07235 CDA09_07250 SM00421 helix_turn_helix, Lux Regulon CDA09_07250 SM00448 cheY-homologous receiver domain CDA09_07255 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDA09_07255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_07255 SM00387 Histidine kinase-like ATPases CDA09_07275 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDA09_07335 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_07335 SM00091 PAS domain CDA09_07335 SM00267 diguanylate cyclase CDA09_07340 SM00481 DNA polymerase alpha chain like domain CDA09_07350 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDA09_07385 SM00382 ATPases associated with a variety of cellular activities CDA09_07385 SM00989 CDA09_07385 CDA09_07390 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_07390 SM00091 PAS domain CDA09_07390 SM00387 Histidine kinase-like ATPases CDA09_07395 SM00421 helix_turn_helix, Lux Regulon CDA09_07395 SM00448 cheY-homologous receiver domain CDA09_07435 SM00822 CDA09_07435 CDA09_07550 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_07550 SM00091 PAS domain CDA09_07550 SM00387 Histidine kinase-like ATPases CDA09_07605 SM00387 Histidine kinase-like ATPases CDA09_07605 SM00388 His Kinase A (phosphoacceptor) domain CDA09_07660 SM00387 Histidine kinase-like ATPases CDA09_07665 SM00448 cheY-homologous receiver domain CDA09_07670 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDA09_07670 SM00091 PAS domain CDA09_07670 SM00387 Histidine kinase-like ATPases CDA09_07670 SM00448 cheY-homologous receiver domain CDA09_07675 SM00421 helix_turn_helix, Lux Regulon CDA09_07675 SM00448 cheY-homologous receiver domain CDA09_07685 SM00563 Phosphate acyltransferases CDA09_07695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDA09_07700 SM00091 PAS domain CDA09_07700 SM00387 Histidine kinase-like ATPases CDA09_07700 SM00388 His Kinase A (phosphoacceptor) domain CDA09_07705 SM00448 cheY-homologous receiver domain CDA09_07705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDA09_07710 SM00448 cheY-homologous receiver domain CDA09_07720 SM00387 Histidine kinase-like ATPases CDA09_07720 SM00388 His Kinase A (phosphoacceptor) domain CDA09_07725 SM00448 cheY-homologous receiver domain CDA09_07730 SM00387 Histidine kinase-like ATPases CDA09_07730 SM00388 His Kinase A (phosphoacceptor) domain CDA09_07735 SM00052 Putative diguanylate phosphodiesterase CDA09_07735 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_07735 SM00091 PAS domain CDA09_07735 SM00267 diguanylate cyclase CDA09_07735 SM00448 cheY-homologous receiver domain CDA09_07740 SM00091 PAS domain CDA09_07740 SM00387 Histidine kinase-like ATPases CDA09_07740 SM00388 His Kinase A (phosphoacceptor) domain CDA09_07745 SM00421 helix_turn_helix, Lux Regulon CDA09_07745 SM00448 cheY-homologous receiver domain CDA09_07760 SM00052 Putative diguanylate phosphodiesterase CDA09_07760 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_07760 SM00091 PAS domain CDA09_07760 SM00267 diguanylate cyclase CDA09_07800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_07800 SM00091 PAS domain CDA09_07800 SM00267 diguanylate cyclase CDA09_07800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_07805 SM00507 HNH nucleases CDA09_07825 SM00421 helix_turn_helix, Lux Regulon CDA09_07825 SM00448 cheY-homologous receiver domain CDA09_07830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_07830 SM00387 Histidine kinase-like ATPases CDA09_07835 SM00849 Metallo-beta-lactamase superfamily CDA09_07845 SM00564 beta-propeller repeat CDA09_07850 SM01049 CDA09_07850 CDA09_07865 SM00062 Bacterial periplasmic substrate-binding proteins CDA09_07865 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CDA09_07880 SM00382 ATPases associated with a variety of cellular activities CDA09_07895 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_07895 SM00091 PAS domain CDA09_07935 SM00382 ATPases associated with a variety of cellular activities CDA09_07960 SM00382 ATPases associated with a variety of cellular activities CDA09_07965 SM00382 ATPases associated with a variety of cellular activities CDA09_07995 SM00062 Bacterial periplasmic substrate-binding proteins CDA09_08005 SM00382 ATPases associated with a variety of cellular activities CDA09_08015 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain CDA09_08040 SM00382 ATPases associated with a variety of cellular activities CDA09_08060 SM00867 YceI-like domain CDA09_08095 SM00943 Bifunctional DNA primase/polymerase, N-terminal CDA09_08185 SM00116 Domain in cystathionine beta-synthase and other proteins. CDA09_08205 SM00746 metallochaperone-like domain CDA09_08235 SM01118 CDA09_08235 CDA09_08295 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDA09_08320 SM00893 Electron transfer flavoprotein domain CDA09_08325 SM00893 Electron transfer flavoprotein domain CDA09_08340 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDA09_08340 SM00382 ATPases associated with a variety of cellular activities CDA09_08345 SM00834 Putative regulatory protein CDA09_08430 SM00563 Phosphate acyltransferases CDA09_08435 SM00978 CDA09_08435 CDA09_08450 SM00382 ATPases associated with a variety of cellular activities CDA09_08505 SM00382 ATPases associated with a variety of cellular activities CDA09_08510 SM00382 ATPases associated with a variety of cellular activities CDA09_08520 SM00116 Domain in cystathionine beta-synthase and other proteins. CDA09_08535 SM00342 helix_turn_helix, arabinose operon control protein CDA09_08575 SM00382 ATPases associated with a variety of cellular activities CDA09_08635 SM00825 Beta-ketoacyl synthase CDA09_08685 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDA09_08685 SM00895 CDA09_08685 CDA09_08705 SM00487 DEAD-like helicases superfamily CDA09_08705 SM00490 helicase superfamily c-terminal domain CDA09_08755 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_08780 SM00342 helix_turn_helix, arabinose operon control protein CDA09_08815 SM00849 Metallo-beta-lactamase superfamily CDA09_08855 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDA09_08855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDA09_08860 SM00100 Cyclic nucleotide-monophosphate binding domain CDA09_08860 SM00419 helix_turn_helix, cAMP Regulatory protein CDA09_08865 SM00327 von Willebrand factor (vWF) type A domain CDA09_08940 SM00387 Histidine kinase-like ATPases CDA09_08940 SM00388 His Kinase A (phosphoacceptor) domain CDA09_08945 SM00448 cheY-homologous receiver domain CDA09_08950 SM00479 CDA09_08950 CDA09_08980 SM00857 Resolvase, N terminal domain CDA09_08995 SM00887 Ethylbenzene dehydrogenase CDA09_09120 SM00829 Enoylreductase CDA09_09145 SM00893 Electron transfer flavoprotein domain CDA09_09150 SM00893 Electron transfer flavoprotein domain CDA09_09175 SM00849 Metallo-beta-lactamase superfamily CDA09_09190 SM00882 Coenzyme A transferase CDA09_09200 SM00882 Coenzyme A transferase CDA09_09210 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDA09_09210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDA09_09210 SM00895 CDA09_09210 CDA09_09235 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDA09_09235 SM00895 CDA09_09235 CDA09_09270 SM00822 CDA09_09270 CDA09_09280 SM00822 CDA09_09280 CDA09_09285 SM00387 Histidine kinase-like ATPases CDA09_09290 SM00448 cheY-homologous receiver domain CDA09_09305 SM00487 DEAD-like helicases superfamily CDA09_09305 SM00490 helicase superfamily c-terminal domain CDA09_09345 SM00530 Helix-turn-helix XRE-family like proteins CDA09_09385 SM00822 CDA09_09385 CDA09_09435 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. CDA09_09535 SM00487 DEAD-like helicases superfamily CDA09_09570 SM01049 CDA09_09570 CDA09_09625 SM00882 Coenzyme A transferase CDA09_09665 SM00822 CDA09_09665 CDA09_09675 SM00849 Metallo-beta-lactamase superfamily CDA09_09700 SM00822 CDA09_09700 CDA09_09710 SM00893 Electron transfer flavoprotein domain CDA09_09715 SM00893 Electron transfer flavoprotein domain CDA09_09720 SM00421 helix_turn_helix, Lux Regulon CDA09_09795 SM00822 CDA09_09795 CDA09_09805 SM00342 helix_turn_helix, arabinose operon control protein CDA09_09820 SM00382 ATPases associated with a variety of cellular activities CDA09_09830 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_09910 SM00893 Electron transfer flavoprotein domain CDA09_09930 SM00421 helix_turn_helix, Lux Regulon CDA09_09945 SM00903 Flavin reductase like domain CDA09_09950 SM00822 CDA09_09950 CDA09_09960 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDA09_10040 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDA09_10050 SM01092 CO dehydrogenase flavoprotein C-terminal domain CDA09_10110 SM00893 Electron transfer flavoprotein domain CDA09_10145 SM00073 Histidine Phosphotransfer domain CDA09_10145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_10145 SM00387 Histidine kinase-like ATPases CDA09_10155 SM00448 cheY-homologous receiver domain CDA09_10185 SM00382 ATPases associated with a variety of cellular activities CDA09_10190 SM00052 Putative diguanylate phosphodiesterase CDA09_10190 SM00267 diguanylate cyclase CDA09_10230 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_10230 SM00091 PAS domain CDA09_10230 SM00387 Histidine kinase-like ATPases CDA09_10230 SM00388 His Kinase A (phosphoacceptor) domain CDA09_10230 SM00448 cheY-homologous receiver domain CDA09_10235 SM00421 helix_turn_helix, Lux Regulon CDA09_10235 SM00448 cheY-homologous receiver domain CDA09_10240 SM00382 ATPases associated with a variety of cellular activities CDA09_10240 SM00989 CDA09_10240 CDA09_10295 SM00028 Tetratricopeptide repeats CDA09_10300 SM00346 helix_turn_helix isocitrate lyase regulation CDA09_10305 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDA09_10305 SM00895 CDA09_10305 CDA09_10330 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDA09_10360 SM00382 ATPases associated with a variety of cellular activities CDA09_10360 SM00989 CDA09_10360 CDA09_10455 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDA09_10470 SM00091 PAS domain CDA09_10470 SM00387 Histidine kinase-like ATPases CDA09_10475 SM00421 helix_turn_helix, Lux Regulon CDA09_10475 SM00448 cheY-homologous receiver domain CDA09_10525 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDA09_10585 SM00382 ATPases associated with a variety of cellular activities CDA09_10590 SM00382 ATPases associated with a variety of cellular activities CDA09_10600 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CDA09_10675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDA09_10710 SM00422 helix_turn_helix, mercury resistance CDA09_10750 SM00342 helix_turn_helix, arabinose operon control protein CDA09_10790 SM00382 ATPases associated with a variety of cellular activities CDA09_10795 SM00825 Beta-ketoacyl synthase CDA09_10845 SM00448 cheY-homologous receiver domain CDA09_10845 SM00862 Transcriptional regulatory protein, C terminal CDA09_10850 SM00387 Histidine kinase-like ATPases CDA09_10850 SM00388 His Kinase A (phosphoacceptor) domain CDA09_10855 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_10855 SM00091 PAS domain CDA09_10855 SM00387 Histidine kinase-like ATPases CDA09_10855 SM00388 His Kinase A (phosphoacceptor) domain CDA09_10860 SM00448 cheY-homologous receiver domain CDA09_10865 SM00052 Putative diguanylate phosphodiesterase CDA09_10865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_10865 SM00091 PAS domain CDA09_10865 SM00267 diguanylate cyclase CDA09_10865 SM00448 cheY-homologous receiver domain CDA09_10885 SM00342 helix_turn_helix, arabinose operon control protein CDA09_10895 SM00989 CDA09_10895 CDA09_10910 SM00893 Electron transfer flavoprotein domain CDA09_10915 SM00893 Electron transfer flavoprotein domain CDA09_10930 SM00382 ATPases associated with a variety of cellular activities CDA09_10940 SM00342 helix_turn_helix, arabinose operon control protein CDA09_11010 SM00530 Helix-turn-helix XRE-family like proteins CDA09_11020 SM00342 helix_turn_helix, arabinose operon control protein CDA09_11045 SM00382 ATPases associated with a variety of cellular activities CDA09_11065 SM00342 helix_turn_helix, arabinose operon control protein CDA09_11070 SM01130 CDA09_11070 CDA09_11090 SM00052 Putative diguanylate phosphodiesterase CDA09_11090 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDA09_11090 SM00267 diguanylate cyclase CDA09_11110 SM01018 B12 binding domain CDA09_11135 SM00989 CDA09_11135 CDA09_11160 SM00822 CDA09_11160 CDA09_11170 SM00342 helix_turn_helix, arabinose operon control protein CDA09_11195 SM01018 B12 binding domain CDA09_11270 SM00382 ATPases associated with a variety of cellular activities CDA09_11270 SM00930 CDA09_11270 CDA09_11285 SM00905 Dihydroneopterin aldolase CDA09_11335 SM00905 Dihydroneopterin aldolase CDA09_11340 SM00382 ATPases associated with a variety of cellular activities CDA09_11395 SM00448 cheY-homologous receiver domain CDA09_11395 SM00862 Transcriptional regulatory protein, C terminal CDA09_11400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_11400 SM00387 Histidine kinase-like ATPases CDA09_11400 SM00388 His Kinase A (phosphoacceptor) domain CDA09_11435 SM00342 helix_turn_helix, arabinose operon control protein CDA09_11475 SM00062 Bacterial periplasmic substrate-binding proteins CDA09_11490 SM00849 Metallo-beta-lactamase superfamily CDA09_11500 SM00849 Metallo-beta-lactamase superfamily CDA09_11570 SM00961 Ribulose bisphosphate carboxylase, small chain CDA09_11575 SM00382 ATPases associated with a variety of cellular activities CDA09_11590 SM00861 Transketolase, pyrimidine binding domain CDA09_11595 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDA09_11610 SM00831 Cation transporter/ATPase, N-terminus CDA09_11635 SM00382 ATPases associated with a variety of cellular activities CDA09_11655 SM00822 CDA09_11655 CDA09_11680 SM00226 Low molecular weight phosphatase family CDA09_11685 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDA09_11695 SM00829 Enoylreductase CDA09_11730 SM00382 ATPases associated with a variety of cellular activities CDA09_11730 SM00487 DEAD-like helicases superfamily CDA09_11730 SM00490 helicase superfamily c-terminal domain CDA09_11765 SM00347 helix_turn_helix multiple antibiotic resistance protein CDA09_11770 SM00822 CDA09_11770 CDA09_11835 SM00344 helix_turn_helix ASNC type CDA09_11855 SM00861 Transketolase, pyrimidine binding domain CDA09_11865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDA09_11865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_11900 SM00382 ATPases associated with a variety of cellular activities CDA09_11905 SM00257 Lysin motif CDA09_11910 SM00849 Metallo-beta-lactamase superfamily CDA09_11925 SM00479 CDA09_11925 CDA09_11965 SM00052 Putative diguanylate phosphodiesterase CDA09_11990 SM00382 ATPases associated with a variety of cellular activities CDA09_11990 SM00448 cheY-homologous receiver domain CDA09_11995 SM00091 PAS domain CDA09_11995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_11995 SM00387 Histidine kinase-like ATPases CDA09_11995 SM00388 His Kinase A (phosphoacceptor) domain CDA09_12015 SM00232 JAB/MPN domain CDA09_12020 SM00450 Rhodanese Homology Domain CDA09_12065 SM00382 ATPases associated with a variety of cellular activities CDA09_12070 SM00382 ATPases associated with a variety of cellular activities CDA09_12095 SM00822 CDA09_12095 CDA09_12125 SM00481 DNA polymerase alpha chain like domain CDA09_12165 SM00530 Helix-turn-helix XRE-family like proteins CDA09_12230 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDA09_12230 SM00895 CDA09_12230 CDA09_12250 SM00382 ATPases associated with a variety of cellular activities CDA09_12255 SM00382 ATPases associated with a variety of cellular activities CDA09_12265 SM00421 helix_turn_helix, Lux Regulon CDA09_12265 SM00448 cheY-homologous receiver domain CDA09_12270 SM00387 Histidine kinase-like ATPases CDA09_12270 SM01049 CDA09_12270 CDA09_12285 SM00833 Cobalamin synthesis protein cobW C-terminal domain CDA09_12290 SM00704 CDGSH-type zinc finger. Function unknown. CDA09_12295 SM00052 Putative diguanylate phosphodiesterase CDA09_12295 SM00448 cheY-homologous receiver domain CDA09_12300 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_12300 SM00091 PAS domain CDA09_12300 SM00387 Histidine kinase-like ATPases CDA09_12300 SM00388 His Kinase A (phosphoacceptor) domain CDA09_12300 SM00448 cheY-homologous receiver domain CDA09_12300 SM01079 CDA09_12300 CDA09_12350 SM01091 Transporter associated domain CDA09_12355 SM01322 CDA09_12355 CDA09_12425 SM01192 CDA09_12425 CDA09_12425 SM01193 CDA09_12425 CDA09_12465 SM01211 CDA09_12465 CDA09_12550 SM00849 Metallo-beta-lactamase superfamily CDA09_12555 SM00382 ATPases associated with a variety of cellular activities CDA09_12630 SM00347 helix_turn_helix multiple antibiotic resistance protein CDA09_12635 SM00478 endonuclease III CDA09_12635 SM01009 AlkA N-terminal domain CDA09_12640 SM00342 helix_turn_helix, arabinose operon control protein CDA09_12665 SM00382 ATPases associated with a variety of cellular activities CDA09_12685 SM00382 ATPases associated with a variety of cellular activities CDA09_12700 SM00986 Uracil DNA glycosylase superfamily CDA09_12700 SM00987 UreE urease accessory protein, C-terminal domain CDA09_12720 SM00448 cheY-homologous receiver domain CDA09_12720 SM00862 Transcriptional regulatory protein, C terminal CDA09_12725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_12725 SM00387 Histidine kinase-like ATPases CDA09_12725 SM00388 His Kinase A (phosphoacceptor) domain CDA09_12755 SM00893 Electron transfer flavoprotein domain CDA09_12760 SM00893 Electron transfer flavoprotein domain CDA09_12790 SM00382 ATPases associated with a variety of cellular activities CDA09_12810 SM00954 Region found in RelA / SpoT proteins CDA09_12875 SM00487 DEAD-like helicases superfamily CDA09_12875 SM00490 helicase superfamily c-terminal domain CDA09_12875 SM00982 CDA09_12875 CDA09_12875 SM01058 CarD-like/TRCF domain CDA09_12880 SM00248 ankyrin repeats CDA09_12890 SM00382 ATPases associated with a variety of cellular activities CDA09_12925 SM00867 YceI-like domain CDA09_12930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_12940 SM00387 Histidine kinase-like ATPases CDA09_12945 SM00448 cheY-homologous receiver domain CDA09_12990 SM00100 Cyclic nucleotide-monophosphate binding domain CDA09_12990 SM00419 helix_turn_helix, cAMP Regulatory protein CDA09_13005 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDA09_13005 SM00091 PAS domain CDA09_13005 SM00267 diguanylate cyclase CDA09_13040 SM00487 DEAD-like helicases superfamily CDA09_13040 SM00490 helicase superfamily c-terminal domain CDA09_13080 SM00116 Domain in cystathionine beta-synthase and other proteins. CDA09_13080 SM01240 CDA09_13080 CDA09_13135 SM00382 ATPases associated with a variety of cellular activities CDA09_13135 SM01086 C-terminal, D2-small domain, of ClpB protein CDA09_13155 SM00852 Probable molybdopterin binding domain CDA09_13170 SM00487 DEAD-like helicases superfamily CDA09_13170 SM00491 CDA09_13170 CDA09_13190 SM00861 Transketolase, pyrimidine binding domain CDA09_13225 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDA09_13225 SM00866 CDA09_13225 CDA09_13240 SM00316 Ribosomal protein S1-like RNA-binding domain CDA09_13245 SM00240 Forkhead associated domain CDA09_13275 SM00382 ATPases associated with a variety of cellular activities CDA09_13315 SM00900 CDA09_13315 CDA09_13325 SM00478 endonuclease III CDA09_13325 SM00525 CDA09_13325 CDA09_13335 SM00382 ATPases associated with a variety of cellular activities CDA09_13345 SM00347 helix_turn_helix multiple antibiotic resistance protein CDA09_13355 SM00387 Histidine kinase-like ATPases CDA09_13400 SM00825 Beta-ketoacyl synthase CDA09_13415 SM00822 CDA09_13415 CDA09_13425 SM00563 Phosphate acyltransferases CDA09_13495 SM00382 ATPases associated with a variety of cellular activities CDA09_13555 SM00829 Enoylreductase CDA09_13665 SM00822 CDA09_13665 CDA09_13680 SM01049 CDA09_13680 CDA09_13685 SM00346 helix_turn_helix isocitrate lyase regulation CDA09_13720 SM00893 Electron transfer flavoprotein domain CDA09_13725 SM00893 Electron transfer flavoprotein domain CDA09_13795 SM00382 ATPases associated with a variety of cellular activities CDA09_13850 SM00822 CDA09_13850 CDA09_13925 SM00052 Putative diguanylate phosphodiesterase CDA09_13925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDA09_13925 SM00267 diguanylate cyclase CDA09_13980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDA09_14140 SM00052 Putative diguanylate phosphodiesterase CDA09_14170 SM00487 DEAD-like helicases superfamily CDA09_14180 SM00487 DEAD-like helicases superfamily CDA09_14270 SM00316 Ribosomal protein S1-like RNA-binding domain CDA09_14270 SM00322 K homology RNA-binding domain CDA09_14275 SM01387 CDA09_14275 CDA09_14290 SM00173 Ras subfamily of RAS small GTPases CDA09_14295 SM00316 Ribosomal protein S1-like RNA-binding domain CDA09_14305 SM00363 S4 RNA-binding domain CDA09_14335 SM00481 DNA polymerase alpha chain like domain CDA09_14390 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_14390 SM00091 PAS domain CDA09_14390 SM00267 diguanylate cyclase CDA09_14390 SM01079 CDA09_14390 CDA09_14395 SM00382 ATPases associated with a variety of cellular activities CDA09_14400 SM00849 Metallo-beta-lactamase superfamily CDA09_14425 SM00382 ATPases associated with a variety of cellular activities CDA09_14435 SM00267 diguanylate cyclase CDA09_14435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_14455 SM00382 ATPases associated with a variety of cellular activities CDA09_14470 SM00450 Rhodanese Homology Domain CDA09_14475 SM00382 ATPases associated with a variety of cellular activities CDA09_14475 SM00448 cheY-homologous receiver domain CDA09_14480 SM00387 Histidine kinase-like ATPases CDA09_14480 SM00388 His Kinase A (phosphoacceptor) domain CDA09_14485 SM00382 ATPases associated with a variety of cellular activities CDA09_14500 SM00881 CoA binding domain CDA09_14510 SM00316 Ribosomal protein S1-like RNA-binding domain CDA09_14510 SM00732 Likely ribonuclease with RNase H fold. CDA09_14540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDA09_14540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_14555 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_14555 SM00091 PAS domain CDA09_14555 SM00387 Histidine kinase-like ATPases CDA09_14560 SM00421 helix_turn_helix, Lux Regulon CDA09_14560 SM00448 cheY-homologous receiver domain CDA09_14580 SM00382 ATPases associated with a variety of cellular activities CDA09_14580 SM00989 CDA09_14580 CDA09_14595 SM00116 Domain in cystathionine beta-synthase and other proteins. CDA09_14680 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_14685 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDA09_14690 SM00052 Putative diguanylate phosphodiesterase CDA09_14690 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDA09_14690 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_14690 SM00091 PAS domain CDA09_14690 SM00267 diguanylate cyclase CDA09_14690 SM00448 cheY-homologous receiver domain CDA09_14695 SM00448 cheY-homologous receiver domain CDA09_14700 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_14700 SM00091 PAS domain CDA09_14700 SM00387 Histidine kinase-like ATPases CDA09_14700 SM00388 His Kinase A (phosphoacceptor) domain CDA09_14710 SM00822 CDA09_14710 CDA09_14735 SM00382 ATPases associated with a variety of cellular activities CDA09_14740 SM00382 ATPases associated with a variety of cellular activities CDA09_14760 SM00387 Histidine kinase-like ATPases CDA09_14765 SM00052 Putative diguanylate phosphodiesterase CDA09_14765 SM00091 PAS domain CDA09_14765 SM00267 diguanylate cyclase CDA09_14765 SM00448 cheY-homologous receiver domain CDA09_14810 SM00382 ATPases associated with a variety of cellular activities CDA09_14850 SM00421 helix_turn_helix, Lux Regulon CDA09_14885 SM00838 Elongation factor G C-terminus CDA09_14895 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CDA09_14895 SM00292 breast cancer carboxy-terminal domain CDA09_14895 SM00532 Ligase N family CDA09_14900 SM00771 ZipA, C-terminal domain (FtsZ-binding) CDA09_14995 SM00487 DEAD-like helicases superfamily CDA09_14995 SM00490 helicase superfamily c-terminal domain CDA09_15070 SM00382 ATPases associated with a variety of cellular activities CDA09_15130 SM00382 ATPases associated with a variety of cellular activities CDA09_15170 SM00487 DEAD-like helicases superfamily CDA09_15185 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CDA09_15185 SM00465 GIY-YIG type nucleases (URI domain) CDA09_15215 SM00358 Double-stranded RNA binding motif CDA09_15215 SM00535 Ribonuclease III family CDA09_15240 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDA09_15275 SM00825 Beta-ketoacyl synthase CDA09_15285 SM00822 CDA09_15285 CDA09_15290 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CDA09_15330 SM00363 S4 RNA-binding domain CDA09_15335 SM00316 Ribosomal protein S1-like RNA-binding domain CDA09_15340 SM00226 Low molecular weight phosphatase family CDA09_15345 SM00487 DEAD-like helicases superfamily CDA09_15345 SM00490 helicase superfamily c-terminal domain CDA09_15375 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_15405 SM00248 ankyrin repeats CDA09_15465 SM00881 CoA binding domain CDA09_15530 SM00347 helix_turn_helix multiple antibiotic resistance protein CDA09_15550 SM00347 helix_turn_helix multiple antibiotic resistance protein CDA09_15655 SM00347 helix_turn_helix multiple antibiotic resistance protein CDA09_15660 SM00382 ATPases associated with a variety of cellular activities CDA09_15660 SM00448 cheY-homologous receiver domain CDA09_15665 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_15665 SM00091 PAS domain CDA09_15665 SM00387 Histidine kinase-like ATPases CDA09_15665 SM00388 His Kinase A (phosphoacceptor) domain CDA09_15665 SM00989 CDA09_15665 CDA09_15680 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain CDA09_15740 SM00411 bacterial (prokaryotic) histone like domain CDA09_15745 SM00382 ATPases associated with a variety of cellular activities CDA09_15745 SM00464 Found in ATP-dependent protease La (LON) CDA09_15750 SM00382 ATPases associated with a variety of cellular activities CDA09_15750 SM00994 ClpX C4-type zinc finger CDA09_15750 SM01086 C-terminal, D2-small domain, of ClpB protein CDA09_15765 SM00763 PrkA AAA domain CDA09_15785 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDA09_15825 SM00670 Large family of predicted nucleotide-binding domains CDA09_15830 SM00116 Domain in cystathionine beta-synthase and other proteins. CDA09_15835 SM00479 CDA09_15835 CDA09_15850 SM00028 Tetratricopeptide repeats CDA09_15855 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CDA09_15940 SM00479 CDA09_15940 CDA09_16030 SM00382 ATPases associated with a variety of cellular activities CDA09_16045 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_16085 SM00342 helix_turn_helix, arabinose operon control protein CDA09_16090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDA09_16090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_16145 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDA09_16150 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDA09_16200 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDA09_16205 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDA09_16250 SM00382 ATPases associated with a variety of cellular activities CDA09_16275 SM00382 ATPases associated with a variety of cellular activities CDA09_16285 SM01103 CDA09_16285 CDA09_16295 SM00851 MGS-like domain CDA09_16295 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDA09_16300 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CDA09_16345 SM00100 Cyclic nucleotide-monophosphate binding domain CDA09_16345 SM00220 Serine/Threonine protein kinases, catalytic domain CDA09_16360 SM00271 DnaJ molecular chaperone homology domain CDA09_16365 SM00840 CDA09_16365 CDA09_16370 SM00028 Tetratricopeptide repeats CDA09_16450 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDA09_16455 SM01329 CDA09_16455 CDA09_16500 SM00116 Domain in cystathionine beta-synthase and other proteins. CDA09_16515 SM00357 Cold shock protein domain CDA09_16515 SM00382 ATPases associated with a variety of cellular activities CDA09_16515 SM00959 Rho termination factor, N-terminal domain CDA09_16565 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_16575 SM00822 CDA09_16575 CDA09_16580 SM00822 CDA09_16580 CDA09_16600 SM00363 S4 RNA-binding domain CDA09_16690 SM00900 CDA09_16690 CDA09_16715 SM00062 Bacterial periplasmic substrate-binding proteins CDA09_16730 SM00382 ATPases associated with a variety of cellular activities CDA09_16740 SM00843 CDA09_16740 CDA09_16745 SM00100 Cyclic nucleotide-monophosphate binding domain CDA09_16745 SM00419 helix_turn_helix, cAMP Regulatory protein CDA09_16755 SM00463 Small MutS-related domain CDA09_16760 SM00938 Nitrogen regulatory protein P-II CDA09_16790 SM00422 helix_turn_helix, mercury resistance CDA09_16800 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_16805 SM00100 Cyclic nucleotide-monophosphate binding domain CDA09_16805 SM00419 helix_turn_helix, cAMP Regulatory protein CDA09_16825 SM00100 Cyclic nucleotide-monophosphate binding domain CDA09_16825 SM00419 helix_turn_helix, cAMP Regulatory protein CDA09_16835 SM00849 Metallo-beta-lactamase superfamily CDA09_16835 SM01027 Beta-Casp domain CDA09_16890 SM00822 CDA09_16890 CDA09_16945 SM00855 Phosphoglycerate mutase family CDA09_16995 SM00822 CDA09_16995 CDA09_17010 SM00822 CDA09_17010 CDA09_17035 SM00829 Enoylreductase CDA09_17125 SM00822 CDA09_17125 CDA09_17235 SM00853 MutL C terminal dimerisation domain CDA09_17235 SM01340 CDA09_17235 CDA09_17265 SM00387 Histidine kinase-like ATPases CDA09_17265 SM00433 TopoisomeraseII CDA09_17280 SM00797 Allophanate hydrolase subunit 2 CDA09_17285 SM00796 Allophanate hydrolase subunit 1 CDA09_17305 SM00434 DNA Topoisomerase IV CDA09_17330 SM00382 ATPases associated with a variety of cellular activities CDA09_17330 SM00962 SRP54-type protein, GTPase domain CDA09_17380 SM01130 CDA09_17380 CDA09_17400 SM00460 Transglutaminase/protease-like homologues CDA09_17415 SM00257 Lysin motif CDA09_17435 SM00422 helix_turn_helix, mercury resistance CDA09_17440 SM00411 bacterial (prokaryotic) histone like domain CDA09_17445 SM00873 B3/4 domain CDA09_17445 SM00874 tRNA synthetase B5 domain CDA09_17445 SM00896 Ferredoxin-fold anticodon binding domain CDA09_17470 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CDA09_17495 SM00344 helix_turn_helix ASNC type CDA09_17535 SM00984 UDP binding domain CDA09_17540 SM00028 Tetratricopeptide repeats CDA09_17550 SM00411 bacterial (prokaryotic) histone like domain CDA09_17555 SM00316 Ribosomal protein S1-like RNA-binding domain CDA09_17570 SM00830 Chorismate mutase type II CDA09_17580 SM00434 DNA Topoisomerase IV CDA09_17655 SM00852 Probable molybdopterin binding domain CDA09_17665 SM00382 ATPases associated with a variety of cellular activities CDA09_17665 SM00962 SRP54-type protein, GTPase domain CDA09_17665 SM00963 SRP54-type protein, helical bundle domain CDA09_17690 SM00834 Putative regulatory protein CDA09_17705 SM00448 cheY-homologous receiver domain CDA09_17825 SM00052 Putative diguanylate phosphodiesterase CDA09_17825 SM00267 diguanylate cyclase CDA09_17835 SM00341 Helicase and RNase D C-terminal CDA09_17835 SM00487 DEAD-like helicases superfamily CDA09_17835 SM00490 helicase superfamily c-terminal domain CDA09_17835 SM00956 CDA09_17835 CDA09_17840 SM00052 Putative diguanylate phosphodiesterase CDA09_17855 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDA09_17880 SM00342 helix_turn_helix, arabinose operon control protein CDA09_17905 SM00382 ATPases associated with a variety of cellular activities CDA09_17910 SM00382 ATPases associated with a variety of cellular activities CDA09_17925 SM00387 Histidine kinase-like ATPases CDA09_17930 SM00448 cheY-homologous receiver domain CDA09_17940 SM00344 helix_turn_helix ASNC type CDA09_17990 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDA09_17995 SM00849 Metallo-beta-lactamase superfamily CDA09_18000 SM00240 Forkhead associated domain CDA09_18005 SM00331 Sigma factor PP2C-like phosphatases CDA09_18005 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CDA09_18030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_18030 SM00091 PAS domain CDA09_18030 SM00387 Histidine kinase-like ATPases CDA09_18030 SM00388 His Kinase A (phosphoacceptor) domain CDA09_18035 SM00421 helix_turn_helix, Lux Regulon CDA09_18035 SM00448 cheY-homologous receiver domain CDA09_18040 SM00363 S4 RNA-binding domain CDA09_18045 SM00977 TilS substrate C-terminal domain CDA09_18055 SM00116 Domain in cystathionine beta-synthase and other proteins. CDA09_18055 SM01091 Transporter associated domain CDA09_18060 SM00831 Cation transporter/ATPase, N-terminus CDA09_18090 SM01323 CDA09_18090 CDA09_18125 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_18125 SM00091 PAS domain CDA09_18125 SM00387 Histidine kinase-like ATPases CDA09_18125 SM00388 His Kinase A (phosphoacceptor) domain CDA09_18140 SM00957 SecA DEAD-like domain CDA09_18140 SM00958 SecA preprotein cross-linking domain CDA09_18160 SM00864 Tubulin/FtsZ family, GTPase domain CDA09_18160 SM00865 Tubulin/FtsZ family, C-terminal domain CDA09_18165 SM00842 Cell division protein FtsA CDA09_18265 SM00749 bacterial OsmY and nodulation domain CDA09_18295 SM00878 Biotin carboxylase C-terminal domain CDA09_18335 SM00563 Phosphate acyltransferases CDA09_18450 SM00382 ATPases associated with a variety of cellular activities CDA09_18490 SM00450 Rhodanese Homology Domain CDA09_18515 SM01057 Eukaryotic-type carbonic anhydrase CDA09_18555 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_18565 SM00861 Transketolase, pyrimidine binding domain CDA09_18605 SM00116 Domain in cystathionine beta-synthase and other proteins. CDA09_18620 SM00564 beta-propeller repeat CDA09_18660 SM00955 CDA09_18660 CDA09_18680 SM00116 Domain in cystathionine beta-synthase and other proteins. CDA09_18680 SM00924 MgtE intracellular N domain CDA09_18700 SM00448 cheY-homologous receiver domain CDA09_18705 SM00448 cheY-homologous receiver domain CDA09_18710 SM00260 Two component signalling adaptor domain CDA09_18715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDA09_18720 SM00073 Histidine Phosphotransfer domain CDA09_18720 SM00260 Two component signalling adaptor domain CDA09_18720 SM00387 Histidine kinase-like ATPases CDA09_18720 SM00448 cheY-homologous receiver domain CDA09_18720 SM01231 CDA09_18720 CDA09_18735 SM00732 Likely ribonuclease with RNase H fold. CDA09_18755 SM01152 CDA09_18755 CDA09_18775 SM00382 ATPases associated with a variety of cellular activities CDA09_18785 SM00981 CDA09_18785 CDA09_18830 SM00052 Putative diguanylate phosphodiesterase CDA09_18830 SM00267 diguanylate cyclase CDA09_18830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_18840 SM00421 helix_turn_helix, Lux Regulon CDA09_18850 SM00382 ATPases associated with a variety of cellular activities CDA09_18860 SM00382 ATPases associated with a variety of cellular activities CDA09_18915 SM00052 Putative diguanylate phosphodiesterase CDA09_18915 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_18915 SM00267 diguanylate cyclase CDA09_18915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_18970 SM00382 ATPases associated with a variety of cellular activities CDA09_19010 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDA09_19025 SM00450 Rhodanese Homology Domain CDA09_19045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_19045 SM00387 Histidine kinase-like ATPases CDA09_19045 SM00388 His Kinase A (phosphoacceptor) domain CDA09_19050 SM00448 cheY-homologous receiver domain CDA09_19050 SM00862 Transcriptional regulatory protein, C terminal CDA09_19190 SM01321 CDA09_19190 CDA09_19210 SM00382 ATPases associated with a variety of cellular activities CDA09_19210 SM00448 cheY-homologous receiver domain CDA09_19215 SM00387 Histidine kinase-like ATPases CDA09_19215 SM00388 His Kinase A (phosphoacceptor) domain CDA09_19235 SM01007 Class II Aldolase and Adducin N-terminal domain CDA09_19300 SM00671 Sel1-like repeats. CDA09_19305 SM00849 Metallo-beta-lactamase superfamily CDA09_19315 SM00382 ATPases associated with a variety of cellular activities CDA09_19320 SM00882 Coenzyme A transferase CDA09_19325 SM00882 Coenzyme A transferase CDA09_19380 SM00382 ATPases associated with a variety of cellular activities CDA09_19395 SM00662 RNA polymerases D CDA09_19400 SM00363 S4 RNA-binding domain CDA09_19400 SM01390 CDA09_19400 CDA09_19420 SM00316 Ribosomal protein S1-like RNA-binding domain CDA09_19470 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CDA09_19475 SM01374 CDA09_19475 CDA09_19495 SM00322 K homology RNA-binding domain CDA09_19510 SM01382 CDA09_19510 CDA09_19510 SM01383 CDA09_19510 CDA09_19530 SM01403 CDA09_19530 CDA09_19540 SM00838 Elongation factor G C-terminus CDA09_19540 SM00889 Elongation factor G, domain IV CDA09_19555 SM00663 RNA polymerase I subunit A N-terminus CDA09_19580 SM00649 Ribosomal protein L11/L12 CDA09_19585 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CDA09_19635 SM00421 helix_turn_helix, Lux Regulon CDA09_19635 SM00448 cheY-homologous receiver domain CDA09_19645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_19645 SM00387 Histidine kinase-like ATPases CDA09_19645 SM00388 His Kinase A (phosphoacceptor) domain CDA09_19645 SM00448 cheY-homologous receiver domain CDA09_19675 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_19695 SM00062 Bacterial periplasmic substrate-binding proteins CDA09_19705 SM00382 ATPases associated with a variety of cellular activities CDA09_19715 SM00382 ATPases associated with a variety of cellular activities CDA09_19735 SM00382 ATPases associated with a variety of cellular activities CDA09_19765 SM00421 helix_turn_helix, Lux Regulon CDA09_19765 SM00448 cheY-homologous receiver domain CDA09_19770 SM00091 PAS domain CDA09_19770 SM00387 Histidine kinase-like ATPases CDA09_19780 SM00052 Putative diguanylate phosphodiesterase CDA09_19780 SM00267 diguanylate cyclase CDA09_19785 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDA09_19795 SM00342 helix_turn_helix, arabinose operon control protein CDA09_19800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_19800 SM00091 PAS domain CDA09_19800 SM00387 Histidine kinase-like ATPases CDA09_19800 SM00388 His Kinase A (phosphoacceptor) domain CDA09_19800 SM00448 cheY-homologous receiver domain CDA09_19805 SM00448 cheY-homologous receiver domain CDA09_19805 SM00862 Transcriptional regulatory protein, C terminal CDA09_19835 SM00448 cheY-homologous receiver domain CDA09_19835 SM00862 Transcriptional regulatory protein, C terminal CDA09_19840 SM00387 Histidine kinase-like ATPases CDA09_19840 SM00388 His Kinase A (phosphoacceptor) domain CDA09_19860 SM00091 PAS domain CDA09_19860 SM00387 Histidine kinase-like ATPases CDA09_19865 SM00421 helix_turn_helix, Lux Regulon CDA09_19865 SM00448 cheY-homologous receiver domain CDA09_19880 SM00421 helix_turn_helix, Lux Regulon CDA09_19880 SM00448 cheY-homologous receiver domain CDA09_19885 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDA09_19905 SM00878 Biotin carboxylase C-terminal domain CDA09_19925 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDA09_19925 SM00895 CDA09_19925 CDA09_19935 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDA09_19940 SM00421 helix_turn_helix, Lux Regulon CDA09_19940 SM00448 cheY-homologous receiver domain CDA09_19945 SM00448 cheY-homologous receiver domain CDA09_19980 SM00382 ATPases associated with a variety of cellular activities CDA09_19985 SM00858 CDA09_19985 CDA09_20035 SM00028 Tetratricopeptide repeats CDA09_20070 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_20085 SM00487 DEAD-like helicases superfamily CDA09_20085 SM00490 helicase superfamily c-terminal domain CDA09_20185 SM01209 CDA09_20185 CDA09_20260 SM00014 Acid phosphatase homologues CDA09_20265 SM00014 Acid phosphatase homologues CDA09_20275 SM00220 Serine/Threonine protein kinases, catalytic domain CDA09_20280 SM00028 Tetratricopeptide repeats CDA09_20315 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDA09_20350 SM00842 Cell division protein FtsA CDA09_20360 SM01219 CDA09_20360 CDA09_20415 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CDA09_20435 SM00487 DEAD-like helicases superfamily CDA09_20435 SM00490 helicase superfamily c-terminal domain CDA09_20480 SM00387 Histidine kinase-like ATPases CDA09_20480 SM00388 His Kinase A (phosphoacceptor) domain CDA09_20485 SM00448 cheY-homologous receiver domain CDA09_20485 SM00862 Transcriptional regulatory protein, C terminal CDA09_20570 SM00642 Alpha-amylase domain CDA09_20580 SM00382 ATPases associated with a variety of cellular activities CDA09_20590 SM00870 CDA09_20590 CDA09_20640 SM00244 prohibitin homologues CDA09_20645 SM00382 ATPases associated with a variety of cellular activities CDA09_20645 SM01086 C-terminal, D2-small domain, of ClpB protein CDA09_20705 SM00387 Histidine kinase-like ATPases CDA09_20710 SM00448 cheY-homologous receiver domain CDA09_20745 SM00487 DEAD-like helicases superfamily CDA09_20780 SM00052 Putative diguanylate phosphodiesterase CDA09_20780 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_20780 SM00091 PAS domain CDA09_20780 SM00267 diguanylate cyclase CDA09_20790 SM00382 ATPases associated with a variety of cellular activities CDA09_20795 SM00382 ATPases associated with a variety of cellular activities CDA09_20830 SM00382 ATPases associated with a variety of cellular activities CDA09_20840 SM00382 ATPases associated with a variety of cellular activities CDA09_20890 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDA09_20925 SM00240 Forkhead associated domain CDA09_20950 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDA09_20995 SM00052 Putative diguanylate phosphodiesterase CDA09_21015 SM00346 helix_turn_helix isocitrate lyase regulation CDA09_21025 SM00487 DEAD-like helicases superfamily CDA09_21025 SM00490 helicase superfamily c-terminal domain CDA09_21050 SM01101 CDA09_21050 CDA09_21075 SM00646 CDA09_21075 CDA09_21145 SM01400 CDA09_21145 CDA09_21150 SM00450 Rhodanese Homology Domain CDA09_21160 SM01018 B12 binding domain CDA09_21200 SM00382 ATPases associated with a variety of cellular activities CDA09_21205 SM00382 ATPases associated with a variety of cellular activities CDA09_21220 SM00382 ATPases associated with a variety of cellular activities CDA09_21235 SM00938 Nitrogen regulatory protein P-II CDA09_21260 SM00382 ATPases associated with a variety of cellular activities CDA09_21315 SM00220 Serine/Threonine protein kinases, catalytic domain CDA09_21320 SM00331 Sigma factor PP2C-like phosphatases CDA09_21320 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CDA09_21335 SM00729 Elongator protein 3, MiaB family, Radical SAM CDA09_21375 SM00530 Helix-turn-helix XRE-family like proteins CDA09_21435 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDA09_21480 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDA09_21480 SM00895 CDA09_21480 CDA09_21540 SM00382 ATPases associated with a variety of cellular activities CDA09_21615 SM00966 SpoVT / AbrB like domain CDA09_21850 SM00382 ATPases associated with a variety of cellular activities CDA09_21855 SM00382 ATPases associated with a variety of cellular activities CDA09_21870 SM00421 helix_turn_helix, Lux Regulon CDA09_21870 SM00448 cheY-homologous receiver domain CDA09_21875 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDA09_21875 SM00387 Histidine kinase-like ATPases CDA09_21945 SM00052 Putative diguanylate phosphodiesterase CDA09_21945 SM00091 PAS domain CDA09_21945 SM00267 diguanylate cyclase CDA09_21945 SM00387 Histidine kinase-like ATPases CDA09_21945 SM00388 His Kinase A (phosphoacceptor) domain CDA09_21945 SM00448 cheY-homologous receiver domain CDA09_21980 SM00822 CDA09_21980 CDA09_22075 SM00411 bacterial (prokaryotic) histone like domain CDA09_22080 SM00487 DEAD-like helicases superfamily CDA09_22130 SM00528 Domain in histone-like proteins of HNS family CDA09_22155 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CDA09_22155 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CDA09_22155 SM00493 CDA09_22155 CDA09_22225 SM00903 Flavin reductase like domain CDA09_22230 SM00478 endonuclease III CDA09_22235 SM00464 Found in ATP-dependent protease La (LON) CDA09_22270 SM00849 Metallo-beta-lactamase superfamily CDA09_22275 SM00382 ATPases associated with a variety of cellular activities CDA09_22305 SM00052 Putative diguanylate phosphodiesterase CDA09_22305 SM00267 diguanylate cyclase CDA09_22305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_22455 SM00945 ProQ/FINO family CDA09_22460 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDA09_22465 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDA09_22500 SM00347 helix_turn_helix multiple antibiotic resistance protein CDA09_22525 SM00421 helix_turn_helix, Lux Regulon CDA09_22525 SM00448 cheY-homologous receiver domain CDA09_22535 SM00966 SpoVT / AbrB like domain CDA09_22630 SM00822 CDA09_22630 CDA09_22690 SM00382 ATPases associated with a variety of cellular activities CDA09_22695 SM00382 ATPases associated with a variety of cellular activities CDA09_22730 SM00530 Helix-turn-helix XRE-family like proteins CDA09_22755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDA09_22770 SM00897 FIST N domain CDA09_22770 SM01204 CDA09_22770 CDA09_22790 SM00382 ATPases associated with a variety of cellular activities CDA09_22840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDA09_22840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_22840 SM01049 CDA09_22840 CDA09_22865 SM00257 Lysin motif CDA09_22915 SM00487 DEAD-like helicases superfamily CDA09_22915 SM00490 helicase superfamily c-terminal domain CDA09_22940 SM00988 UreE urease accessory protein, N-terminal domain CDA09_22965 SM00382 ATPases associated with a variety of cellular activities CDA09_22990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDA09_22995 SM00448 cheY-homologous receiver domain CDA09_23000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDA09_23000 SM00387 Histidine kinase-like ATPases CDA09_23000 SM00388 His Kinase A (phosphoacceptor) domain CDA09_23030 SM01234 CDA09_23030